Multiple sequence alignment - TraesCS4A01G451200

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G451200 chr4A 100.000 2204 0 0 1 2204 716943674 716945877 0.000000e+00 4071.0
1 TraesCS4A01G451200 chr4A 94.527 201 11 0 2 202 170631737 170631937 5.910000e-81 311.0
2 TraesCS4A01G451200 chr4A 94.527 201 11 0 2 202 603339811 603340011 5.910000e-81 311.0
3 TraesCS4A01G451200 chr4A 84.438 347 16 13 1867 2188 716829711 716830044 7.640000e-80 307.0
4 TraesCS4A01G451200 chr4A 98.291 117 1 1 1386 1502 716945192 716945307 1.030000e-48 204.0
5 TraesCS4A01G451200 chr4A 97.701 87 2 0 1635 1721 716945221 716945307 1.360000e-32 150.0
6 TraesCS4A01G451200 chr4A 96.629 89 3 0 1635 1723 716945089 716945177 4.900000e-32 148.0
7 TraesCS4A01G451200 chr1B 97.762 1653 18 2 1 1634 97369021 97370673 0.000000e+00 2830.0
8 TraesCS4A01G451200 chr1B 97.498 1519 21 1 1 1502 636493375 636491857 0.000000e+00 2579.0
9 TraesCS4A01G451200 chr1B 96.848 1523 30 6 1 1505 636491049 636489527 0.000000e+00 2531.0
10 TraesCS4A01G451200 chr1B 95.000 220 5 3 1503 1721 636489662 636489448 7.540000e-90 340.0
11 TraesCS4A01G451200 chr1B 99.248 133 0 1 1503 1634 97370408 97370540 2.830000e-59 239.0
12 TraesCS4A01G451200 chr1B 98.291 117 2 0 1386 1502 97370557 97370673 2.870000e-49 206.0
13 TraesCS4A01G451200 chr1B 97.753 89 2 0 1635 1723 97370454 97370542 1.050000e-33 154.0
14 TraesCS4A01G451200 chr3B 96.513 1520 14 2 1 1502 572676027 572677525 0.000000e+00 2477.0
15 TraesCS4A01G451200 chr3B 90.148 1553 100 14 1 1507 77701909 77703454 0.000000e+00 1971.0
16 TraesCS4A01G451200 chr3B 89.199 1435 97 17 118 1502 12308536 12309962 0.000000e+00 1738.0
17 TraesCS4A01G451200 chr3B 99.248 133 0 1 1503 1634 572677393 572677525 2.830000e-59 239.0
18 TraesCS4A01G451200 chr3B 97.701 87 2 0 1635 1721 572677439 572677525 1.360000e-32 150.0
19 TraesCS4A01G451200 chr7B 89.795 1558 93 16 1 1509 290955167 290953627 0.000000e+00 1936.0
20 TraesCS4A01G451200 chr7B 89.011 1547 111 18 1 1500 692826375 692827909 0.000000e+00 1860.0
21 TraesCS4A01G451200 chr7B 89.683 882 47 14 658 1502 226424060 226424934 0.000000e+00 1085.0
22 TraesCS4A01G451200 chr7B 91.211 512 25 4 1142 1634 376354020 376354530 0.000000e+00 678.0
23 TraesCS4A01G451200 chr5A 89.749 1551 102 24 1 1503 33169871 33171412 0.000000e+00 1930.0
24 TraesCS4A01G451200 chr5A 89.863 582 23 3 958 1503 23904591 23904010 0.000000e+00 715.0
25 TraesCS4A01G451200 chr5A 89.329 581 25 4 958 1502 66824283 66824862 0.000000e+00 695.0
26 TraesCS4A01G451200 chr4B 88.064 1441 99 18 121 1505 622489730 622488307 0.000000e+00 1640.0
27 TraesCS4A01G451200 chr4B 89.295 766 34 9 1002 1721 251997820 251998583 0.000000e+00 917.0
28 TraesCS4A01G451200 chr4B 89.845 581 23 9 958 1502 604143941 604144521 0.000000e+00 713.0
29 TraesCS4A01G451200 chr4B 95.092 163 8 0 1548 1710 251998906 251999068 7.810000e-65 257.0
30 TraesCS4A01G451200 chr4B 97.101 138 2 2 1502 1638 622488443 622488307 4.730000e-57 231.0
31 TraesCS4A01G451200 chr4B 94.958 119 6 0 1603 1721 251998874 251998992 1.040000e-43 187.0
32 TraesCS4A01G451200 chrUn 88.428 1374 119 14 1 1343 278600458 278599094 0.000000e+00 1620.0
33 TraesCS4A01G451200 chr7A 90.918 1024 44 13 520 1505 709417188 709418200 0.000000e+00 1330.0
34 TraesCS4A01G451200 chr7A 89.347 582 25 10 958 1502 71222067 71222648 0.000000e+00 697.0
35 TraesCS4A01G451200 chr7A 85.895 475 31 7 1749 2202 16713493 16713034 7.120000e-130 473.0
36 TraesCS4A01G451200 chr7A 90.769 65 5 1 1957 2020 135699296 135699232 3.900000e-13 86.1
37 TraesCS4A01G451200 chr3A 91.130 575 39 4 1 563 675317698 675317124 0.000000e+00 769.0
38 TraesCS4A01G451200 chr3A 90.534 581 19 7 958 1502 27583420 27584000 0.000000e+00 736.0
39 TraesCS4A01G451200 chr3A 94.545 220 10 2 1503 1721 459621252 459621034 2.710000e-89 339.0
40 TraesCS4A01G451200 chr2A 89.908 545 19 5 1002 1510 442717422 442716878 0.000000e+00 669.0
41 TraesCS4A01G451200 chr2A 91.972 436 17 1 1090 1507 48259621 48260056 1.460000e-166 595.0
42 TraesCS4A01G451200 chr7D 84.421 475 24 16 1749 2202 17361814 17361369 2.620000e-114 422.0
43 TraesCS4A01G451200 chr7D 88.889 63 5 2 1955 2015 21838260 21838198 2.350000e-10 76.8
44 TraesCS4A01G451200 chr6A 95.025 201 10 0 2 202 224099015 224098815 1.270000e-82 316.0
45 TraesCS4A01G451200 chr5D 89.552 67 6 1 1955 2020 432985988 432985922 1.400000e-12 84.2
46 TraesCS4A01G451200 chr6D 88.000 50 4 1 1965 2012 448714216 448714265 8.500000e-05 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G451200 chr4A 716943674 716945877 2203 False 1143.250000 4071 98.155250 1 2204 4 chr4A.!!$F4 2203
1 TraesCS4A01G451200 chr1B 636489448 636493375 3927 True 1816.666667 2579 96.448667 1 1721 3 chr1B.!!$R1 1720
2 TraesCS4A01G451200 chr1B 97369021 97370673 1652 False 857.250000 2830 98.263500 1 1723 4 chr1B.!!$F1 1722
3 TraesCS4A01G451200 chr3B 77701909 77703454 1545 False 1971.000000 1971 90.148000 1 1507 1 chr3B.!!$F2 1506
4 TraesCS4A01G451200 chr3B 12308536 12309962 1426 False 1738.000000 1738 89.199000 118 1502 1 chr3B.!!$F1 1384
5 TraesCS4A01G451200 chr3B 572676027 572677525 1498 False 955.333333 2477 97.820667 1 1721 3 chr3B.!!$F3 1720
6 TraesCS4A01G451200 chr7B 290953627 290955167 1540 True 1936.000000 1936 89.795000 1 1509 1 chr7B.!!$R1 1508
7 TraesCS4A01G451200 chr7B 692826375 692827909 1534 False 1860.000000 1860 89.011000 1 1500 1 chr7B.!!$F3 1499
8 TraesCS4A01G451200 chr7B 226424060 226424934 874 False 1085.000000 1085 89.683000 658 1502 1 chr7B.!!$F1 844
9 TraesCS4A01G451200 chr7B 376354020 376354530 510 False 678.000000 678 91.211000 1142 1634 1 chr7B.!!$F2 492
10 TraesCS4A01G451200 chr5A 33169871 33171412 1541 False 1930.000000 1930 89.749000 1 1503 1 chr5A.!!$F1 1502
11 TraesCS4A01G451200 chr5A 23904010 23904591 581 True 715.000000 715 89.863000 958 1503 1 chr5A.!!$R1 545
12 TraesCS4A01G451200 chr5A 66824283 66824862 579 False 695.000000 695 89.329000 958 1502 1 chr5A.!!$F2 544
13 TraesCS4A01G451200 chr4B 622488307 622489730 1423 True 935.500000 1640 92.582500 121 1638 2 chr4B.!!$R1 1517
14 TraesCS4A01G451200 chr4B 604143941 604144521 580 False 713.000000 713 89.845000 958 1502 1 chr4B.!!$F1 544
15 TraesCS4A01G451200 chr4B 251997820 251999068 1248 False 453.666667 917 93.115000 1002 1721 3 chr4B.!!$F2 719
16 TraesCS4A01G451200 chrUn 278599094 278600458 1364 True 1620.000000 1620 88.428000 1 1343 1 chrUn.!!$R1 1342
17 TraesCS4A01G451200 chr7A 709417188 709418200 1012 False 1330.000000 1330 90.918000 520 1505 1 chr7A.!!$F2 985
18 TraesCS4A01G451200 chr7A 71222067 71222648 581 False 697.000000 697 89.347000 958 1502 1 chr7A.!!$F1 544
19 TraesCS4A01G451200 chr3A 675317124 675317698 574 True 769.000000 769 91.130000 1 563 1 chr3A.!!$R2 562
20 TraesCS4A01G451200 chr3A 27583420 27584000 580 False 736.000000 736 90.534000 958 1502 1 chr3A.!!$F1 544
21 TraesCS4A01G451200 chr2A 442716878 442717422 544 True 669.000000 669 89.908000 1002 1510 1 chr2A.!!$R1 508

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
858 915 2.941064 CAGTAGGACGACGATAGGAACA 59.059 50.0 0.0 0.0 43.77 3.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1790 4899 0.037232 ACGCAGCTTAGGTGGAAGTC 60.037 55.0 13.5 0.0 0.0 3.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
858 915 2.941064 CAGTAGGACGACGATAGGAACA 59.059 50.000 0.00 0.00 43.77 3.18
1344 3749 5.886609 TGGAGTTTCATATTTTCCTCCACA 58.113 37.500 0.00 0.00 42.54 4.17
1440 3999 2.427812 TCGTGCGGTTGTATTGGATCTA 59.572 45.455 0.00 0.00 0.00 1.98
1445 4004 5.932303 GTGCGGTTGTATTGGATCTATGTAT 59.068 40.000 0.00 0.00 0.00 2.29
1540 4108 9.101655 GTTAAGGCTAACCGTTAGATTGATTTA 57.898 33.333 20.39 7.23 42.76 1.40
1541 4109 7.787725 AAGGCTAACCGTTAGATTGATTTAG 57.212 36.000 20.39 0.00 42.76 1.85
1558 4127 2.023414 TAGTGGGCCTAATCGTGCGG 62.023 60.000 4.53 0.00 0.00 5.69
1679 4788 0.757512 TGTACGCTTTGTGGGGTGTA 59.242 50.000 0.00 0.00 34.32 2.90
1728 4837 9.241317 TGTTTAATAGTAGTATAGAAACGCTGC 57.759 33.333 16.09 0.00 32.29 5.25
1729 4838 9.460906 GTTTAATAGTAGTATAGAAACGCTGCT 57.539 33.333 0.00 0.00 0.00 4.24
1731 4840 7.932120 AATAGTAGTATAGAAACGCTGCTTG 57.068 36.000 0.00 0.00 0.00 4.01
1732 4841 4.683832 AGTAGTATAGAAACGCTGCTTGG 58.316 43.478 0.00 0.00 0.00 3.61
1733 4842 2.906354 AGTATAGAAACGCTGCTTGGG 58.094 47.619 0.00 0.00 0.00 4.12
1734 4843 2.236395 AGTATAGAAACGCTGCTTGGGT 59.764 45.455 0.00 0.00 44.07 4.51
1738 4847 3.749981 AACGCTGCTTGGGTTCAG 58.250 55.556 0.00 0.00 46.85 3.02
1739 4848 1.148273 AACGCTGCTTGGGTTCAGA 59.852 52.632 0.00 0.00 46.85 3.27
1740 4849 1.166531 AACGCTGCTTGGGTTCAGAC 61.167 55.000 0.00 0.00 46.85 3.51
1741 4850 1.302033 CGCTGCTTGGGTTCAGACT 60.302 57.895 0.00 0.00 32.26 3.24
1742 4851 0.886490 CGCTGCTTGGGTTCAGACTT 60.886 55.000 0.00 0.00 32.26 3.01
1743 4852 0.877743 GCTGCTTGGGTTCAGACTTC 59.122 55.000 0.00 0.00 32.26 3.01
1744 4853 1.815408 GCTGCTTGGGTTCAGACTTCA 60.815 52.381 0.00 0.00 32.26 3.02
1745 4854 2.149578 CTGCTTGGGTTCAGACTTCAG 58.850 52.381 0.00 0.00 32.26 3.02
1746 4855 1.768275 TGCTTGGGTTCAGACTTCAGA 59.232 47.619 0.00 0.00 0.00 3.27
1747 4856 2.224378 TGCTTGGGTTCAGACTTCAGAG 60.224 50.000 0.00 0.00 0.00 3.35
1748 4857 2.873649 GCTTGGGTTCAGACTTCAGAGG 60.874 54.545 0.00 0.00 0.00 3.69
1749 4858 0.687354 TGGGTTCAGACTTCAGAGGC 59.313 55.000 0.00 0.00 0.00 4.70
1750 4859 0.687354 GGGTTCAGACTTCAGAGGCA 59.313 55.000 0.00 0.00 31.22 4.75
1751 4860 1.338579 GGGTTCAGACTTCAGAGGCAG 60.339 57.143 0.00 0.00 31.22 4.85
1752 4861 1.338579 GGTTCAGACTTCAGAGGCAGG 60.339 57.143 0.00 0.00 31.22 4.85
1753 4862 0.979665 TTCAGACTTCAGAGGCAGGG 59.020 55.000 0.00 0.00 31.22 4.45
1754 4863 0.115152 TCAGACTTCAGAGGCAGGGA 59.885 55.000 0.00 0.00 31.22 4.20
1755 4864 1.202330 CAGACTTCAGAGGCAGGGAT 58.798 55.000 0.00 0.00 31.22 3.85
1756 4865 1.138661 CAGACTTCAGAGGCAGGGATC 59.861 57.143 0.00 0.00 31.22 3.36
1757 4866 1.008206 AGACTTCAGAGGCAGGGATCT 59.992 52.381 0.00 0.00 31.22 2.75
1758 4867 1.412343 GACTTCAGAGGCAGGGATCTC 59.588 57.143 0.00 0.00 0.00 2.75
1759 4868 1.273495 ACTTCAGAGGCAGGGATCTCA 60.273 52.381 0.00 0.00 32.76 3.27
1760 4869 1.836166 CTTCAGAGGCAGGGATCTCAA 59.164 52.381 0.00 0.00 32.76 3.02
1761 4870 1.956869 TCAGAGGCAGGGATCTCAAA 58.043 50.000 0.00 0.00 32.76 2.69
1762 4871 2.269023 TCAGAGGCAGGGATCTCAAAA 58.731 47.619 0.00 0.00 32.76 2.44
1763 4872 2.238144 TCAGAGGCAGGGATCTCAAAAG 59.762 50.000 0.00 0.00 32.76 2.27
1764 4873 1.064832 AGAGGCAGGGATCTCAAAAGC 60.065 52.381 0.00 0.00 32.76 3.51
1765 4874 0.998145 AGGCAGGGATCTCAAAAGCT 59.002 50.000 0.00 0.00 0.00 3.74
1766 4875 1.064832 AGGCAGGGATCTCAAAAGCTC 60.065 52.381 0.00 0.00 0.00 4.09
1767 4876 1.012841 GCAGGGATCTCAAAAGCTCG 58.987 55.000 0.00 0.00 0.00 5.03
1768 4877 1.661341 CAGGGATCTCAAAAGCTCGG 58.339 55.000 0.00 0.00 0.00 4.63
1769 4878 0.543749 AGGGATCTCAAAAGCTCGGG 59.456 55.000 0.00 0.00 0.00 5.14
1770 4879 0.464554 GGGATCTCAAAAGCTCGGGG 60.465 60.000 0.00 0.00 0.00 5.73
1771 4880 1.098129 GGATCTCAAAAGCTCGGGGC 61.098 60.000 0.00 0.00 42.19 5.80
1772 4881 1.077429 ATCTCAAAAGCTCGGGGCC 60.077 57.895 0.00 0.00 43.05 5.80
1773 4882 1.852157 ATCTCAAAAGCTCGGGGCCA 61.852 55.000 4.39 0.00 43.05 5.36
1774 4883 1.603455 CTCAAAAGCTCGGGGCCAA 60.603 57.895 4.39 0.00 43.05 4.52
1775 4884 1.152652 TCAAAAGCTCGGGGCCAAA 60.153 52.632 4.39 0.00 43.05 3.28
1776 4885 0.757188 TCAAAAGCTCGGGGCCAAAA 60.757 50.000 4.39 0.00 43.05 2.44
1777 4886 0.321346 CAAAAGCTCGGGGCCAAAAT 59.679 50.000 4.39 0.00 43.05 1.82
1778 4887 0.608130 AAAAGCTCGGGGCCAAAATC 59.392 50.000 4.39 0.00 43.05 2.17
1779 4888 1.595093 AAAGCTCGGGGCCAAAATCG 61.595 55.000 4.39 0.00 43.05 3.34
1780 4889 2.437716 GCTCGGGGCCAAAATCGA 60.438 61.111 4.39 3.42 34.27 3.59
1781 4890 1.823899 GCTCGGGGCCAAAATCGAT 60.824 57.895 4.39 0.00 34.27 3.59
1782 4891 1.384222 GCTCGGGGCCAAAATCGATT 61.384 55.000 4.39 4.39 34.27 3.34
1783 4892 1.102978 CTCGGGGCCAAAATCGATTT 58.897 50.000 17.60 17.60 0.00 2.17
1784 4893 1.065551 CTCGGGGCCAAAATCGATTTC 59.934 52.381 22.93 11.15 0.00 2.17
1785 4894 1.102978 CGGGGCCAAAATCGATTTCT 58.897 50.000 22.93 11.01 0.00 2.52
1786 4895 1.202290 CGGGGCCAAAATCGATTTCTG 60.202 52.381 22.93 20.11 0.00 3.02
1787 4896 1.824852 GGGGCCAAAATCGATTTCTGT 59.175 47.619 22.93 5.80 0.00 3.41
1788 4897 2.233676 GGGGCCAAAATCGATTTCTGTT 59.766 45.455 22.93 5.43 0.00 3.16
1789 4898 3.253230 GGGCCAAAATCGATTTCTGTTG 58.747 45.455 22.93 16.62 0.00 3.33
1790 4899 3.253230 GGCCAAAATCGATTTCTGTTGG 58.747 45.455 25.24 25.24 30.72 3.77
1791 4900 3.056891 GGCCAAAATCGATTTCTGTTGGA 60.057 43.478 30.34 0.00 29.57 3.53
1792 4901 3.920412 GCCAAAATCGATTTCTGTTGGAC 59.080 43.478 30.34 21.33 29.57 4.02
1793 4902 4.321230 GCCAAAATCGATTTCTGTTGGACT 60.321 41.667 30.34 10.68 29.57 3.85
1794 4903 5.772521 CCAAAATCGATTTCTGTTGGACTT 58.227 37.500 25.32 6.13 29.57 3.01
1795 4904 5.858581 CCAAAATCGATTTCTGTTGGACTTC 59.141 40.000 25.32 0.00 29.57 3.01
1796 4905 5.629079 AAATCGATTTCTGTTGGACTTCC 57.371 39.130 17.60 0.00 0.00 3.46
1797 4906 3.762407 TCGATTTCTGTTGGACTTCCA 57.238 42.857 0.00 0.00 45.94 3.53
1807 4916 0.324943 TGGACTTCCACCTAAGCTGC 59.675 55.000 0.00 0.00 42.01 5.25
1808 4917 0.741221 GGACTTCCACCTAAGCTGCG 60.741 60.000 0.00 0.00 35.64 5.18
1809 4918 0.037232 GACTTCCACCTAAGCTGCGT 60.037 55.000 0.00 0.00 0.00 5.24
1810 4919 0.320771 ACTTCCACCTAAGCTGCGTG 60.321 55.000 0.00 0.00 0.00 5.34
1811 4920 1.003839 TTCCACCTAAGCTGCGTGG 60.004 57.895 17.16 17.16 46.99 4.94
1812 4921 2.436646 CCACCTAAGCTGCGTGGG 60.437 66.667 15.78 15.78 42.81 4.61
1813 4922 2.662596 CACCTAAGCTGCGTGGGA 59.337 61.111 23.26 0.00 0.00 4.37
1814 4923 1.741770 CACCTAAGCTGCGTGGGAC 60.742 63.158 23.26 0.00 0.00 4.46
1815 4924 2.125106 CCTAAGCTGCGTGGGACC 60.125 66.667 12.37 0.00 0.00 4.46
1816 4925 2.509336 CTAAGCTGCGTGGGACCG 60.509 66.667 0.00 0.00 0.00 4.79
1817 4926 2.992689 TAAGCTGCGTGGGACCGA 60.993 61.111 0.00 0.00 0.00 4.69
1818 4927 2.890847 CTAAGCTGCGTGGGACCGAG 62.891 65.000 0.00 0.00 0.00 4.63
1820 4929 4.803426 GCTGCGTGGGACCGAGAG 62.803 72.222 0.00 0.00 0.00 3.20
1821 4930 3.062466 CTGCGTGGGACCGAGAGA 61.062 66.667 0.00 0.00 0.00 3.10
1822 4931 2.599281 TGCGTGGGACCGAGAGAA 60.599 61.111 0.00 0.00 0.00 2.87
1823 4932 2.126031 GCGTGGGACCGAGAGAAC 60.126 66.667 0.00 0.00 0.00 3.01
1824 4933 2.927580 GCGTGGGACCGAGAGAACA 61.928 63.158 0.00 0.00 0.00 3.18
1825 4934 1.213013 CGTGGGACCGAGAGAACAG 59.787 63.158 0.00 0.00 0.00 3.16
1826 4935 1.241990 CGTGGGACCGAGAGAACAGA 61.242 60.000 0.00 0.00 0.00 3.41
1827 4936 1.187087 GTGGGACCGAGAGAACAGAT 58.813 55.000 0.00 0.00 0.00 2.90
1828 4937 2.376109 GTGGGACCGAGAGAACAGATA 58.624 52.381 0.00 0.00 0.00 1.98
1829 4938 2.099427 GTGGGACCGAGAGAACAGATAC 59.901 54.545 0.00 0.00 0.00 2.24
1830 4939 1.682323 GGGACCGAGAGAACAGATACC 59.318 57.143 0.00 0.00 0.00 2.73
1831 4940 2.376109 GGACCGAGAGAACAGATACCA 58.624 52.381 0.00 0.00 0.00 3.25
1832 4941 2.359531 GGACCGAGAGAACAGATACCAG 59.640 54.545 0.00 0.00 0.00 4.00
1833 4942 3.018149 GACCGAGAGAACAGATACCAGT 58.982 50.000 0.00 0.00 0.00 4.00
1834 4943 2.755655 ACCGAGAGAACAGATACCAGTG 59.244 50.000 0.00 0.00 0.00 3.66
1835 4944 2.755655 CCGAGAGAACAGATACCAGTGT 59.244 50.000 0.00 0.00 0.00 3.55
1836 4945 3.428180 CCGAGAGAACAGATACCAGTGTG 60.428 52.174 0.00 0.00 0.00 3.82
1837 4946 3.191581 CGAGAGAACAGATACCAGTGTGT 59.808 47.826 0.00 0.00 0.00 3.72
1838 4947 4.673061 CGAGAGAACAGATACCAGTGTGTC 60.673 50.000 0.00 0.00 33.15 3.67
1839 4948 3.511934 AGAGAACAGATACCAGTGTGTCC 59.488 47.826 0.00 0.00 33.41 4.02
1840 4949 3.511477 AGAACAGATACCAGTGTGTCCT 58.489 45.455 0.00 0.00 33.41 3.85
1841 4950 3.511934 AGAACAGATACCAGTGTGTCCTC 59.488 47.826 0.00 0.00 33.41 3.71
1842 4951 3.176924 ACAGATACCAGTGTGTCCTCT 57.823 47.619 0.00 0.00 33.41 3.69
1843 4952 2.828520 ACAGATACCAGTGTGTCCTCTG 59.171 50.000 15.24 15.24 35.69 3.35
1844 4953 3.092301 CAGATACCAGTGTGTCCTCTGA 58.908 50.000 13.34 0.00 34.78 3.27
1845 4954 3.511540 CAGATACCAGTGTGTCCTCTGAA 59.488 47.826 13.34 0.00 34.78 3.02
1846 4955 3.511934 AGATACCAGTGTGTCCTCTGAAC 59.488 47.826 0.00 0.00 34.78 3.18
1847 4956 1.496060 ACCAGTGTGTCCTCTGAACA 58.504 50.000 0.00 0.00 34.78 3.18
1848 4957 2.050144 ACCAGTGTGTCCTCTGAACAT 58.950 47.619 0.00 0.00 34.78 2.71
1849 4958 2.224378 ACCAGTGTGTCCTCTGAACATG 60.224 50.000 0.00 0.00 34.78 3.21
1850 4959 2.037641 CCAGTGTGTCCTCTGAACATGA 59.962 50.000 0.00 0.00 34.78 3.07
1851 4960 3.324117 CAGTGTGTCCTCTGAACATGAG 58.676 50.000 0.00 0.00 34.78 2.90
1852 4961 3.006217 CAGTGTGTCCTCTGAACATGAGA 59.994 47.826 0.00 0.00 34.78 3.27
1853 4962 3.257873 AGTGTGTCCTCTGAACATGAGAG 59.742 47.826 0.00 0.76 37.33 3.20
1854 4963 3.256879 GTGTGTCCTCTGAACATGAGAGA 59.743 47.826 10.68 2.97 39.58 3.10
1855 4964 3.897505 TGTGTCCTCTGAACATGAGAGAA 59.102 43.478 10.68 0.00 39.58 2.87
1856 4965 4.021632 TGTGTCCTCTGAACATGAGAGAAG 60.022 45.833 10.68 0.00 39.58 2.85
1857 4966 4.219507 GTGTCCTCTGAACATGAGAGAAGA 59.780 45.833 10.68 0.91 39.58 2.87
1858 4967 4.835056 TGTCCTCTGAACATGAGAGAAGAA 59.165 41.667 10.68 0.00 39.58 2.52
1859 4968 5.167845 GTCCTCTGAACATGAGAGAAGAAC 58.832 45.833 10.68 1.98 39.58 3.01
1860 4969 4.835056 TCCTCTGAACATGAGAGAAGAACA 59.165 41.667 10.68 0.00 39.58 3.18
1861 4970 5.047448 TCCTCTGAACATGAGAGAAGAACAG 60.047 44.000 10.68 0.00 39.58 3.16
1862 4971 5.144692 TCTGAACATGAGAGAAGAACAGG 57.855 43.478 0.00 0.00 0.00 4.00
1863 4972 3.668447 TGAACATGAGAGAAGAACAGGC 58.332 45.455 0.00 0.00 0.00 4.85
1864 4973 2.777832 ACATGAGAGAAGAACAGGCC 57.222 50.000 0.00 0.00 0.00 5.19
1865 4974 1.980765 ACATGAGAGAAGAACAGGCCA 59.019 47.619 5.01 0.00 0.00 5.36
1866 4975 2.575279 ACATGAGAGAAGAACAGGCCAT 59.425 45.455 5.01 0.00 0.00 4.40
1867 4976 3.009916 ACATGAGAGAAGAACAGGCCATT 59.990 43.478 5.01 0.00 0.00 3.16
1868 4977 4.225942 ACATGAGAGAAGAACAGGCCATTA 59.774 41.667 5.01 0.00 0.00 1.90
1869 4978 4.908601 TGAGAGAAGAACAGGCCATTAA 57.091 40.909 5.01 0.00 0.00 1.40
1870 4979 5.241403 TGAGAGAAGAACAGGCCATTAAA 57.759 39.130 5.01 0.00 0.00 1.52
1871 4980 5.003804 TGAGAGAAGAACAGGCCATTAAAC 58.996 41.667 5.01 0.00 0.00 2.01
1872 4981 5.221925 TGAGAGAAGAACAGGCCATTAAACT 60.222 40.000 5.01 0.00 0.00 2.66
1873 4982 5.006386 AGAGAAGAACAGGCCATTAAACTG 58.994 41.667 5.01 0.00 38.19 3.16
1874 4983 4.985538 AGAAGAACAGGCCATTAAACTGA 58.014 39.130 5.01 0.00 36.17 3.41
1875 4984 5.385198 AGAAGAACAGGCCATTAAACTGAA 58.615 37.500 5.01 0.00 36.17 3.02
1876 4985 6.012745 AGAAGAACAGGCCATTAAACTGAAT 58.987 36.000 5.01 0.00 36.17 2.57
1877 4986 5.649782 AGAACAGGCCATTAAACTGAATG 57.350 39.130 5.01 0.00 36.70 2.67
1878 4987 5.079643 AGAACAGGCCATTAAACTGAATGT 58.920 37.500 5.01 0.00 35.42 2.71
1879 4988 6.245408 AGAACAGGCCATTAAACTGAATGTA 58.755 36.000 5.01 0.00 35.42 2.29
1880 4989 5.897377 ACAGGCCATTAAACTGAATGTAC 57.103 39.130 5.01 0.00 35.42 2.90
1881 4990 5.321102 ACAGGCCATTAAACTGAATGTACA 58.679 37.500 5.01 0.00 35.42 2.90
1882 4991 5.183140 ACAGGCCATTAAACTGAATGTACAC 59.817 40.000 5.01 0.00 35.42 2.90
1883 4992 5.182950 CAGGCCATTAAACTGAATGTACACA 59.817 40.000 5.01 0.00 35.42 3.72
1884 4993 5.772672 AGGCCATTAAACTGAATGTACACAA 59.227 36.000 5.01 0.00 35.42 3.33
1885 4994 5.861787 GGCCATTAAACTGAATGTACACAAC 59.138 40.000 0.00 0.00 35.42 3.32
1886 4995 6.442952 GCCATTAAACTGAATGTACACAACA 58.557 36.000 0.00 0.00 43.86 3.33
1887 4996 6.362283 GCCATTAAACTGAATGTACACAACAC 59.638 38.462 0.00 0.00 42.09 3.32
1888 4997 7.421599 CCATTAAACTGAATGTACACAACACA 58.578 34.615 0.00 0.00 42.09 3.72
1889 4998 7.591057 CCATTAAACTGAATGTACACAACACAG 59.409 37.037 0.00 6.40 42.09 3.66
1890 4999 5.499139 AAACTGAATGTACACAACACAGG 57.501 39.130 0.00 0.00 42.09 4.00
1891 5000 4.415881 ACTGAATGTACACAACACAGGA 57.584 40.909 0.00 0.00 42.09 3.86
1892 5001 4.380531 ACTGAATGTACACAACACAGGAG 58.619 43.478 0.00 0.00 42.09 3.69
1893 5002 3.738982 TGAATGTACACAACACAGGAGG 58.261 45.455 0.00 0.00 42.09 4.30
1894 5003 3.389656 TGAATGTACACAACACAGGAGGA 59.610 43.478 0.00 0.00 42.09 3.71
1895 5004 3.685139 ATGTACACAACACAGGAGGAG 57.315 47.619 0.00 0.00 42.09 3.69
1896 5005 2.673258 TGTACACAACACAGGAGGAGA 58.327 47.619 0.00 0.00 31.43 3.71
1897 5006 2.628178 TGTACACAACACAGGAGGAGAG 59.372 50.000 0.00 0.00 31.43 3.20
1898 5007 0.394565 ACACAACACAGGAGGAGAGC 59.605 55.000 0.00 0.00 0.00 4.09
1899 5008 0.683973 CACAACACAGGAGGAGAGCT 59.316 55.000 0.00 0.00 0.00 4.09
1900 5009 1.895798 CACAACACAGGAGGAGAGCTA 59.104 52.381 0.00 0.00 0.00 3.32
1901 5010 2.094286 CACAACACAGGAGGAGAGCTAG 60.094 54.545 0.00 0.00 0.00 3.42
1902 5011 1.134848 CAACACAGGAGGAGAGCTAGC 60.135 57.143 6.62 6.62 0.00 3.42
1903 5012 0.334676 ACACAGGAGGAGAGCTAGCT 59.665 55.000 19.45 19.45 0.00 3.32
1904 5013 1.032014 CACAGGAGGAGAGCTAGCTC 58.968 60.000 33.21 33.21 43.03 4.09
1921 5030 8.657387 AGCTAGCTCTTATCCAAGTAATATCA 57.343 34.615 12.68 0.00 33.20 2.15
1922 5031 9.265862 AGCTAGCTCTTATCCAAGTAATATCAT 57.734 33.333 12.68 0.00 33.20 2.45
1923 5032 9.883142 GCTAGCTCTTATCCAAGTAATATCATT 57.117 33.333 7.70 0.00 33.20 2.57
1926 5035 9.941325 AGCTCTTATCCAAGTAATATCATTCAG 57.059 33.333 0.00 0.00 33.20 3.02
1927 5036 8.663911 GCTCTTATCCAAGTAATATCATTCAGC 58.336 37.037 0.00 0.00 33.20 4.26
1928 5037 9.716531 CTCTTATCCAAGTAATATCATTCAGCA 57.283 33.333 0.00 0.00 33.20 4.41
1932 5041 7.333528 TCCAAGTAATATCATTCAGCAAACC 57.666 36.000 0.00 0.00 0.00 3.27
1933 5042 6.889177 TCCAAGTAATATCATTCAGCAAACCA 59.111 34.615 0.00 0.00 0.00 3.67
1934 5043 7.560991 TCCAAGTAATATCATTCAGCAAACCAT 59.439 33.333 0.00 0.00 0.00 3.55
1935 5044 7.650504 CCAAGTAATATCATTCAGCAAACCATG 59.349 37.037 0.00 0.00 0.00 3.66
1936 5045 8.407832 CAAGTAATATCATTCAGCAAACCATGA 58.592 33.333 0.00 0.00 0.00 3.07
1937 5046 8.523915 AGTAATATCATTCAGCAAACCATGAA 57.476 30.769 0.00 0.00 39.59 2.57
1938 5047 8.408601 AGTAATATCATTCAGCAAACCATGAAC 58.591 33.333 0.00 0.00 38.19 3.18
1939 5048 7.414222 AATATCATTCAGCAAACCATGAACT 57.586 32.000 0.00 0.00 38.19 3.01
1940 5049 8.523915 AATATCATTCAGCAAACCATGAACTA 57.476 30.769 0.00 0.00 38.19 2.24
1941 5050 5.627499 TCATTCAGCAAACCATGAACTAC 57.373 39.130 0.00 0.00 38.19 2.73
1942 5051 5.069318 TCATTCAGCAAACCATGAACTACA 58.931 37.500 0.00 0.00 38.19 2.74
1943 5052 4.829064 TTCAGCAAACCATGAACTACAC 57.171 40.909 0.00 0.00 30.67 2.90
1944 5053 3.814625 TCAGCAAACCATGAACTACACA 58.185 40.909 0.00 0.00 0.00 3.72
1945 5054 3.563808 TCAGCAAACCATGAACTACACAC 59.436 43.478 0.00 0.00 0.00 3.82
1946 5055 3.314913 CAGCAAACCATGAACTACACACA 59.685 43.478 0.00 0.00 0.00 3.72
1947 5056 3.565482 AGCAAACCATGAACTACACACAG 59.435 43.478 0.00 0.00 0.00 3.66
1948 5057 3.563808 GCAAACCATGAACTACACACAGA 59.436 43.478 0.00 0.00 0.00 3.41
1949 5058 4.036262 GCAAACCATGAACTACACACAGAA 59.964 41.667 0.00 0.00 0.00 3.02
1950 5059 5.510671 CAAACCATGAACTACACACAGAAC 58.489 41.667 0.00 0.00 0.00 3.01
1951 5060 4.415881 ACCATGAACTACACACAGAACA 57.584 40.909 0.00 0.00 0.00 3.18
1952 5061 4.776349 ACCATGAACTACACACAGAACAA 58.224 39.130 0.00 0.00 0.00 2.83
1953 5062 4.574828 ACCATGAACTACACACAGAACAAC 59.425 41.667 0.00 0.00 0.00 3.32
1954 5063 4.574421 CCATGAACTACACACAGAACAACA 59.426 41.667 0.00 0.00 0.00 3.33
1955 5064 5.239306 CCATGAACTACACACAGAACAACAT 59.761 40.000 0.00 0.00 0.00 2.71
1956 5065 6.426633 CCATGAACTACACACAGAACAACATA 59.573 38.462 0.00 0.00 0.00 2.29
1957 5066 7.119699 CCATGAACTACACACAGAACAACATAT 59.880 37.037 0.00 0.00 0.00 1.78
1958 5067 9.150348 CATGAACTACACACAGAACAACATATA 57.850 33.333 0.00 0.00 0.00 0.86
1959 5068 8.528917 TGAACTACACACAGAACAACATATAC 57.471 34.615 0.00 0.00 0.00 1.47
1960 5069 8.145122 TGAACTACACACAGAACAACATATACA 58.855 33.333 0.00 0.00 0.00 2.29
1961 5070 9.151471 GAACTACACACAGAACAACATATACAT 57.849 33.333 0.00 0.00 0.00 2.29
1962 5071 8.703604 ACTACACACAGAACAACATATACATC 57.296 34.615 0.00 0.00 0.00 3.06
1963 5072 6.985188 ACACACAGAACAACATATACATCC 57.015 37.500 0.00 0.00 0.00 3.51
1964 5073 5.580691 ACACACAGAACAACATATACATCCG 59.419 40.000 0.00 0.00 0.00 4.18
1965 5074 5.580691 CACACAGAACAACATATACATCCGT 59.419 40.000 0.00 0.00 0.00 4.69
1966 5075 6.754675 CACACAGAACAACATATACATCCGTA 59.245 38.462 0.00 0.00 0.00 4.02
1967 5076 7.438160 CACACAGAACAACATATACATCCGTAT 59.562 37.037 0.00 0.00 41.34 3.06
1968 5077 7.438160 ACACAGAACAACATATACATCCGTATG 59.562 37.037 0.00 0.00 38.79 2.39
1984 5093 9.778741 ACATCCGTATGTAGTCATTATTGAAAT 57.221 29.630 0.00 0.00 44.66 2.17
1987 5096 9.692749 TCCGTATGTAGTCATTATTGAAATCTC 57.307 33.333 0.00 0.00 35.70 2.75
1988 5097 9.698309 CCGTATGTAGTCATTATTGAAATCTCT 57.302 33.333 0.00 0.00 35.70 3.10
1996 5105 9.692325 AGTCATTATTGAAATCTCTAAAAGGCT 57.308 29.630 0.00 0.00 32.48 4.58
2014 5123 8.794335 AAAAGGCTTATACTTAGAAACAGAGG 57.206 34.615 0.00 0.00 0.00 3.69
2015 5124 6.487299 AGGCTTATACTTAGAAACAGAGGG 57.513 41.667 0.00 0.00 0.00 4.30
2016 5125 6.203072 AGGCTTATACTTAGAAACAGAGGGA 58.797 40.000 0.00 0.00 0.00 4.20
2017 5126 6.325286 AGGCTTATACTTAGAAACAGAGGGAG 59.675 42.308 0.00 0.00 0.00 4.30
2018 5127 6.098552 GGCTTATACTTAGAAACAGAGGGAGT 59.901 42.308 0.00 0.00 0.00 3.85
2029 5138 8.794335 AGAAACAGAGGGAGTATTGTTTAATC 57.206 34.615 1.89 0.00 42.09 1.75
2030 5139 8.606830 AGAAACAGAGGGAGTATTGTTTAATCT 58.393 33.333 1.89 0.00 42.09 2.40
2031 5140 9.886132 GAAACAGAGGGAGTATTGTTTAATCTA 57.114 33.333 1.89 0.00 42.09 1.98
2032 5141 9.668497 AAACAGAGGGAGTATTGTTTAATCTAC 57.332 33.333 0.08 0.00 40.74 2.59
2033 5142 8.611051 ACAGAGGGAGTATTGTTTAATCTACT 57.389 34.615 0.00 0.00 0.00 2.57
2034 5143 8.697292 ACAGAGGGAGTATTGTTTAATCTACTC 58.303 37.037 0.00 0.00 33.81 2.59
2035 5144 8.919145 CAGAGGGAGTATTGTTTAATCTACTCT 58.081 37.037 8.09 0.00 34.49 3.24
2038 5147 9.145442 AGGGAGTATTGTTTAATCTACTCTACC 57.855 37.037 8.09 3.31 34.49 3.18
2039 5148 9.145442 GGGAGTATTGTTTAATCTACTCTACCT 57.855 37.037 8.09 0.00 34.49 3.08
2043 5152 9.609950 GTATTGTTTAATCTACTCTACCTAGCG 57.390 37.037 0.00 0.00 0.00 4.26
2044 5153 6.630444 TGTTTAATCTACTCTACCTAGCGG 57.370 41.667 0.00 0.00 0.00 5.52
2045 5154 6.359804 TGTTTAATCTACTCTACCTAGCGGA 58.640 40.000 0.00 0.00 0.00 5.54
2046 5155 6.830324 TGTTTAATCTACTCTACCTAGCGGAA 59.170 38.462 0.00 0.00 0.00 4.30
2047 5156 6.874288 TTAATCTACTCTACCTAGCGGAAC 57.126 41.667 0.00 0.00 0.00 3.62
2048 5157 3.920231 TCTACTCTACCTAGCGGAACA 57.080 47.619 0.00 0.00 0.00 3.18
2049 5158 4.226427 TCTACTCTACCTAGCGGAACAA 57.774 45.455 0.00 0.00 0.00 2.83
2050 5159 4.197750 TCTACTCTACCTAGCGGAACAAG 58.802 47.826 0.00 0.00 0.00 3.16
2051 5160 1.477295 ACTCTACCTAGCGGAACAAGC 59.523 52.381 0.00 0.00 0.00 4.01
2052 5161 1.476891 CTCTACCTAGCGGAACAAGCA 59.523 52.381 0.00 0.00 37.01 3.91
2053 5162 1.476891 TCTACCTAGCGGAACAAGCAG 59.523 52.381 0.00 0.00 37.01 4.24
2054 5163 1.204941 CTACCTAGCGGAACAAGCAGT 59.795 52.381 0.00 0.00 37.01 4.40
2055 5164 0.037232 ACCTAGCGGAACAAGCAGTC 60.037 55.000 0.00 0.00 37.01 3.51
2056 5165 0.741221 CCTAGCGGAACAAGCAGTCC 60.741 60.000 0.00 0.00 37.01 3.85
2057 5166 0.037326 CTAGCGGAACAAGCAGTCCA 60.037 55.000 0.00 0.00 37.01 4.02
2058 5167 0.037326 TAGCGGAACAAGCAGTCCAG 60.037 55.000 0.00 0.00 37.01 3.86
2059 5168 1.598130 GCGGAACAAGCAGTCCAGT 60.598 57.895 0.00 0.00 34.19 4.00
2060 5169 0.320421 GCGGAACAAGCAGTCCAGTA 60.320 55.000 0.00 0.00 34.19 2.74
2061 5170 1.876416 GCGGAACAAGCAGTCCAGTAA 60.876 52.381 0.00 0.00 34.19 2.24
2062 5171 2.489971 CGGAACAAGCAGTCCAGTAAA 58.510 47.619 0.00 0.00 0.00 2.01
2063 5172 3.074412 CGGAACAAGCAGTCCAGTAAAT 58.926 45.455 0.00 0.00 0.00 1.40
2064 5173 3.502211 CGGAACAAGCAGTCCAGTAAATT 59.498 43.478 0.00 0.00 0.00 1.82
2065 5174 4.023193 CGGAACAAGCAGTCCAGTAAATTT 60.023 41.667 0.00 0.00 0.00 1.82
2066 5175 5.461526 GGAACAAGCAGTCCAGTAAATTTC 58.538 41.667 0.00 0.00 0.00 2.17
2067 5176 4.749245 ACAAGCAGTCCAGTAAATTTCG 57.251 40.909 0.00 0.00 0.00 3.46
2068 5177 4.134563 ACAAGCAGTCCAGTAAATTTCGT 58.865 39.130 0.00 0.00 0.00 3.85
2069 5178 4.024048 ACAAGCAGTCCAGTAAATTTCGTG 60.024 41.667 0.00 0.00 0.00 4.35
2070 5179 4.002906 AGCAGTCCAGTAAATTTCGTGA 57.997 40.909 0.00 0.00 0.00 4.35
2071 5180 4.579869 AGCAGTCCAGTAAATTTCGTGAT 58.420 39.130 0.00 0.00 0.00 3.06
2072 5181 5.003804 AGCAGTCCAGTAAATTTCGTGATT 58.996 37.500 0.00 0.00 0.00 2.57
2073 5182 6.170506 AGCAGTCCAGTAAATTTCGTGATTA 58.829 36.000 0.00 0.00 0.00 1.75
2074 5183 6.653320 AGCAGTCCAGTAAATTTCGTGATTAA 59.347 34.615 0.00 0.00 0.00 1.40
2075 5184 7.174253 AGCAGTCCAGTAAATTTCGTGATTAAA 59.826 33.333 0.00 0.00 0.00 1.52
2076 5185 7.270579 GCAGTCCAGTAAATTTCGTGATTAAAC 59.729 37.037 0.00 0.00 0.00 2.01
2077 5186 8.286800 CAGTCCAGTAAATTTCGTGATTAAACA 58.713 33.333 0.00 0.00 0.00 2.83
2078 5187 8.287503 AGTCCAGTAAATTTCGTGATTAAACAC 58.712 33.333 5.82 5.82 37.42 3.32
2079 5188 8.287503 GTCCAGTAAATTTCGTGATTAAACACT 58.712 33.333 13.24 0.00 38.47 3.55
2080 5189 8.842280 TCCAGTAAATTTCGTGATTAAACACTT 58.158 29.630 13.24 3.99 38.47 3.16
2081 5190 8.901748 CCAGTAAATTTCGTGATTAAACACTTG 58.098 33.333 13.24 0.22 38.47 3.16
2082 5191 9.445786 CAGTAAATTTCGTGATTAAACACTTGT 57.554 29.630 13.24 0.00 38.47 3.16
2088 5197 8.829514 TTTCGTGATTAAACACTTGTTACTTG 57.170 30.769 13.24 0.00 37.25 3.16
2089 5198 7.542534 TCGTGATTAAACACTTGTTACTTGT 57.457 32.000 13.24 0.00 37.25 3.16
2090 5199 8.645730 TCGTGATTAAACACTTGTTACTTGTA 57.354 30.769 13.24 0.00 37.25 2.41
2091 5200 8.542132 TCGTGATTAAACACTTGTTACTTGTAC 58.458 33.333 13.24 0.00 37.25 2.90
2092 5201 7.524861 CGTGATTAAACACTTGTTACTTGTACG 59.475 37.037 13.24 0.37 37.25 3.67
2093 5202 8.542132 GTGATTAAACACTTGTTACTTGTACGA 58.458 33.333 8.50 0.00 37.25 3.43
2094 5203 9.263538 TGATTAAACACTTGTTACTTGTACGAT 57.736 29.630 0.00 0.00 37.25 3.73
2095 5204 9.525007 GATTAAACACTTGTTACTTGTACGATG 57.475 33.333 0.00 0.00 37.25 3.84
2096 5205 8.645730 TTAAACACTTGTTACTTGTACGATGA 57.354 30.769 0.00 0.00 37.25 2.92
2097 5206 7.542534 AAACACTTGTTACTTGTACGATGAA 57.457 32.000 0.00 0.00 37.25 2.57
2098 5207 7.542534 AACACTTGTTACTTGTACGATGAAA 57.457 32.000 0.00 0.00 36.32 2.69
2099 5208 7.724305 ACACTTGTTACTTGTACGATGAAAT 57.276 32.000 0.00 0.00 0.00 2.17
2100 5209 8.821147 ACACTTGTTACTTGTACGATGAAATA 57.179 30.769 0.00 0.00 0.00 1.40
2101 5210 9.263538 ACACTTGTTACTTGTACGATGAAATAA 57.736 29.630 0.00 0.00 0.00 1.40
2102 5211 9.525007 CACTTGTTACTTGTACGATGAAATAAC 57.475 33.333 0.00 0.00 0.00 1.89
2103 5212 9.263538 ACTTGTTACTTGTACGATGAAATAACA 57.736 29.630 0.00 0.00 31.34 2.41
2110 5219 8.612619 ACTTGTACGATGAAATAACAATGATCC 58.387 33.333 0.00 0.00 30.33 3.36
2111 5220 8.731275 TTGTACGATGAAATAACAATGATCCT 57.269 30.769 0.00 0.00 0.00 3.24
2112 5221 8.731275 TGTACGATGAAATAACAATGATCCTT 57.269 30.769 0.00 0.00 0.00 3.36
2113 5222 8.826710 TGTACGATGAAATAACAATGATCCTTC 58.173 33.333 0.00 0.00 0.00 3.46
2114 5223 7.864108 ACGATGAAATAACAATGATCCTTCA 57.136 32.000 0.00 0.00 36.00 3.02
2115 5224 7.697691 ACGATGAAATAACAATGATCCTTCAC 58.302 34.615 0.00 0.00 33.85 3.18
2116 5225 7.336679 ACGATGAAATAACAATGATCCTTCACA 59.663 33.333 0.00 0.00 33.85 3.58
2117 5226 7.854422 CGATGAAATAACAATGATCCTTCACAG 59.146 37.037 0.00 0.00 33.85 3.66
2118 5227 8.812513 ATGAAATAACAATGATCCTTCACAGA 57.187 30.769 0.00 0.00 33.85 3.41
2119 5228 8.272545 TGAAATAACAATGATCCTTCACAGAG 57.727 34.615 0.00 0.00 33.85 3.35
2120 5229 7.884877 TGAAATAACAATGATCCTTCACAGAGT 59.115 33.333 0.00 0.00 33.85 3.24
2121 5230 9.383519 GAAATAACAATGATCCTTCACAGAGTA 57.616 33.333 0.00 0.00 33.85 2.59
2122 5231 8.723942 AATAACAATGATCCTTCACAGAGTAC 57.276 34.615 0.00 0.00 33.85 2.73
2123 5232 5.745312 ACAATGATCCTTCACAGAGTACA 57.255 39.130 0.00 0.00 33.85 2.90
2124 5233 5.482908 ACAATGATCCTTCACAGAGTACAC 58.517 41.667 0.00 0.00 33.85 2.90
2125 5234 5.012046 ACAATGATCCTTCACAGAGTACACA 59.988 40.000 0.00 0.00 33.85 3.72
2126 5235 4.790765 TGATCCTTCACAGAGTACACAG 57.209 45.455 0.00 0.00 0.00 3.66
2127 5236 4.152647 TGATCCTTCACAGAGTACACAGT 58.847 43.478 0.00 0.00 0.00 3.55
2128 5237 5.321927 TGATCCTTCACAGAGTACACAGTA 58.678 41.667 0.00 0.00 0.00 2.74
2129 5238 5.183331 TGATCCTTCACAGAGTACACAGTAC 59.817 44.000 0.00 0.00 0.00 2.73
2130 5239 4.466827 TCCTTCACAGAGTACACAGTACA 58.533 43.478 9.68 0.00 0.00 2.90
2131 5240 4.891168 TCCTTCACAGAGTACACAGTACAA 59.109 41.667 9.68 0.00 0.00 2.41
2132 5241 5.538813 TCCTTCACAGAGTACACAGTACAAT 59.461 40.000 9.68 0.00 0.00 2.71
2133 5242 5.635280 CCTTCACAGAGTACACAGTACAATG 59.365 44.000 9.68 9.31 0.00 2.82
2134 5243 5.784578 TCACAGAGTACACAGTACAATGT 57.215 39.130 9.68 9.84 0.00 2.71
2135 5244 6.156748 TCACAGAGTACACAGTACAATGTT 57.843 37.500 9.68 0.00 0.00 2.71
2136 5245 7.279750 TCACAGAGTACACAGTACAATGTTA 57.720 36.000 9.68 3.38 0.00 2.41
2137 5246 7.143340 TCACAGAGTACACAGTACAATGTTAC 58.857 38.462 9.68 4.30 0.00 2.50
2138 5247 6.921307 CACAGAGTACACAGTACAATGTTACA 59.079 38.462 9.68 0.00 0.00 2.41
2139 5248 7.114953 CACAGAGTACACAGTACAATGTTACAG 59.885 40.741 9.68 0.00 0.00 2.74
2140 5249 7.013942 ACAGAGTACACAGTACAATGTTACAGA 59.986 37.037 9.68 0.00 0.00 3.41
2141 5250 8.029522 CAGAGTACACAGTACAATGTTACAGAT 58.970 37.037 9.68 0.00 0.00 2.90
2142 5251 8.029522 AGAGTACACAGTACAATGTTACAGATG 58.970 37.037 9.68 0.00 0.00 2.90
2143 5252 7.892609 AGTACACAGTACAATGTTACAGATGA 58.107 34.615 9.68 0.00 0.00 2.92
2144 5253 8.029522 AGTACACAGTACAATGTTACAGATGAG 58.970 37.037 9.68 0.00 0.00 2.90
2145 5254 5.639506 ACACAGTACAATGTTACAGATGAGC 59.360 40.000 7.73 1.46 0.00 4.26
2146 5255 5.063944 CACAGTACAATGTTACAGATGAGCC 59.936 44.000 7.73 0.00 0.00 4.70
2147 5256 4.572389 CAGTACAATGTTACAGATGAGCCC 59.428 45.833 7.73 0.00 0.00 5.19
2148 5257 3.719268 ACAATGTTACAGATGAGCCCA 57.281 42.857 7.73 0.00 0.00 5.36
2149 5258 3.614092 ACAATGTTACAGATGAGCCCAG 58.386 45.455 7.73 0.00 0.00 4.45
2150 5259 3.264193 ACAATGTTACAGATGAGCCCAGA 59.736 43.478 7.73 0.00 0.00 3.86
2151 5260 4.080129 ACAATGTTACAGATGAGCCCAGAT 60.080 41.667 7.73 0.00 0.00 2.90
2152 5261 3.548745 TGTTACAGATGAGCCCAGATG 57.451 47.619 0.00 0.00 0.00 2.90
2153 5262 3.106827 TGTTACAGATGAGCCCAGATGA 58.893 45.455 0.00 0.00 0.00 2.92
2154 5263 3.713248 TGTTACAGATGAGCCCAGATGAT 59.287 43.478 0.00 0.00 0.00 2.45
2155 5264 4.164796 TGTTACAGATGAGCCCAGATGATT 59.835 41.667 0.00 0.00 0.00 2.57
2156 5265 3.947612 ACAGATGAGCCCAGATGATTT 57.052 42.857 0.00 0.00 0.00 2.17
2157 5266 3.818180 ACAGATGAGCCCAGATGATTTC 58.182 45.455 0.00 0.00 0.00 2.17
2158 5267 3.458857 ACAGATGAGCCCAGATGATTTCT 59.541 43.478 0.00 0.00 33.90 2.52
2159 5268 4.657504 ACAGATGAGCCCAGATGATTTCTA 59.342 41.667 0.00 0.00 31.77 2.10
2160 5269 4.996122 CAGATGAGCCCAGATGATTTCTAC 59.004 45.833 0.00 0.00 31.77 2.59
2161 5270 3.845781 TGAGCCCAGATGATTTCTACC 57.154 47.619 0.00 0.00 31.77 3.18
2162 5271 3.114606 TGAGCCCAGATGATTTCTACCA 58.885 45.455 0.00 0.00 31.77 3.25
2163 5272 3.718434 TGAGCCCAGATGATTTCTACCAT 59.282 43.478 0.00 0.00 31.77 3.55
2164 5273 4.070716 GAGCCCAGATGATTTCTACCATG 58.929 47.826 0.00 0.00 31.77 3.66
2165 5274 3.152341 GCCCAGATGATTTCTACCATGG 58.848 50.000 11.19 11.19 31.77 3.66
2166 5275 3.759581 CCCAGATGATTTCTACCATGGG 58.240 50.000 18.09 0.00 31.77 4.00
2167 5276 3.152341 CCAGATGATTTCTACCATGGGC 58.848 50.000 18.09 0.00 31.77 5.36
2168 5277 3.181436 CCAGATGATTTCTACCATGGGCT 60.181 47.826 18.09 0.00 31.77 5.19
2169 5278 3.819337 CAGATGATTTCTACCATGGGCTG 59.181 47.826 18.09 5.61 31.77 4.85
2170 5279 3.461085 AGATGATTTCTACCATGGGCTGT 59.539 43.478 18.09 0.00 30.96 4.40
2171 5280 3.737559 TGATTTCTACCATGGGCTGTT 57.262 42.857 18.09 0.00 0.00 3.16
2172 5281 3.620488 TGATTTCTACCATGGGCTGTTC 58.380 45.455 18.09 6.32 0.00 3.18
2173 5282 2.507407 TTTCTACCATGGGCTGTTCC 57.493 50.000 18.09 0.00 0.00 3.62
2174 5283 1.668826 TTCTACCATGGGCTGTTCCT 58.331 50.000 18.09 0.00 34.39 3.36
2175 5284 0.911769 TCTACCATGGGCTGTTCCTG 59.088 55.000 18.09 0.00 34.39 3.86
2176 5285 0.911769 CTACCATGGGCTGTTCCTGA 59.088 55.000 18.09 0.00 34.39 3.86
2177 5286 1.492176 CTACCATGGGCTGTTCCTGAT 59.508 52.381 18.09 0.00 34.39 2.90
2178 5287 0.706433 ACCATGGGCTGTTCCTGATT 59.294 50.000 18.09 0.00 34.39 2.57
2179 5288 1.108776 CCATGGGCTGTTCCTGATTG 58.891 55.000 2.85 0.00 34.39 2.67
2180 5289 1.341285 CCATGGGCTGTTCCTGATTGA 60.341 52.381 2.85 0.00 34.39 2.57
2181 5290 2.022195 CATGGGCTGTTCCTGATTGAG 58.978 52.381 0.00 0.00 34.39 3.02
2182 5291 0.322816 TGGGCTGTTCCTGATTGAGC 60.323 55.000 0.00 0.00 34.39 4.26
2183 5292 0.322816 GGGCTGTTCCTGATTGAGCA 60.323 55.000 0.00 0.00 34.39 4.26
2184 5293 1.538047 GGCTGTTCCTGATTGAGCAA 58.462 50.000 0.00 0.00 0.00 3.91
2185 5294 1.888512 GGCTGTTCCTGATTGAGCAAA 59.111 47.619 0.00 0.00 0.00 3.68
2186 5295 2.297033 GGCTGTTCCTGATTGAGCAAAA 59.703 45.455 0.00 0.00 0.00 2.44
2187 5296 3.243839 GGCTGTTCCTGATTGAGCAAAAA 60.244 43.478 0.00 0.00 0.00 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
858 915 2.045926 GGAGGTGCCGTCATTGCT 60.046 61.111 0.00 0.00 0.00 3.91
1344 3749 1.991121 TTGACTGACCGTACTCCACT 58.009 50.000 0.00 0.00 0.00 4.00
1440 3999 2.170166 CACACCCCACAAAGCATACAT 58.830 47.619 0.00 0.00 0.00 2.29
1445 4004 0.106469 TAAGCACACCCCACAAAGCA 60.106 50.000 0.00 0.00 0.00 3.91
1540 4108 2.186903 CGCACGATTAGGCCCACT 59.813 61.111 0.00 0.00 0.00 4.00
1541 4109 2.895372 CCGCACGATTAGGCCCAC 60.895 66.667 0.00 0.00 0.00 4.61
1558 4127 7.011109 ACAAAGCGTACATAGATCCAATACAAC 59.989 37.037 0.00 0.00 0.00 3.32
1638 4747 0.655733 GATCCAATACAACCGCACGG 59.344 55.000 7.71 7.71 42.03 4.94
1712 4821 3.449737 ACCCAAGCAGCGTTTCTATACTA 59.550 43.478 0.00 0.00 0.00 1.82
1721 4830 1.148273 TCTGAACCCAAGCAGCGTT 59.852 52.632 0.00 0.00 32.27 4.84
1722 4831 1.598130 GTCTGAACCCAAGCAGCGT 60.598 57.895 0.00 0.00 32.27 5.07
1723 4832 0.886490 AAGTCTGAACCCAAGCAGCG 60.886 55.000 0.00 0.00 32.27 5.18
1724 4833 0.877743 GAAGTCTGAACCCAAGCAGC 59.122 55.000 0.00 0.00 32.27 5.25
1725 4834 2.149578 CTGAAGTCTGAACCCAAGCAG 58.850 52.381 0.00 0.00 0.00 4.24
1726 4835 1.768275 TCTGAAGTCTGAACCCAAGCA 59.232 47.619 0.00 0.00 0.00 3.91
1727 4836 2.421619 CTCTGAAGTCTGAACCCAAGC 58.578 52.381 0.00 0.00 0.00 4.01
1728 4837 2.873649 GCCTCTGAAGTCTGAACCCAAG 60.874 54.545 0.00 0.00 0.00 3.61
1729 4838 1.072331 GCCTCTGAAGTCTGAACCCAA 59.928 52.381 0.00 0.00 0.00 4.12
1730 4839 0.687354 GCCTCTGAAGTCTGAACCCA 59.313 55.000 0.00 0.00 0.00 4.51
1731 4840 0.687354 TGCCTCTGAAGTCTGAACCC 59.313 55.000 0.00 0.00 0.00 4.11
1732 4841 1.338579 CCTGCCTCTGAAGTCTGAACC 60.339 57.143 0.00 0.00 0.00 3.62
1733 4842 1.338579 CCCTGCCTCTGAAGTCTGAAC 60.339 57.143 0.00 0.00 0.00 3.18
1734 4843 0.979665 CCCTGCCTCTGAAGTCTGAA 59.020 55.000 0.00 0.00 0.00 3.02
1735 4844 0.115152 TCCCTGCCTCTGAAGTCTGA 59.885 55.000 0.00 0.00 0.00 3.27
1736 4845 1.138661 GATCCCTGCCTCTGAAGTCTG 59.861 57.143 0.00 0.00 0.00 3.51
1737 4846 1.008206 AGATCCCTGCCTCTGAAGTCT 59.992 52.381 0.00 0.00 0.00 3.24
1738 4847 1.412343 GAGATCCCTGCCTCTGAAGTC 59.588 57.143 0.00 0.00 0.00 3.01
1739 4848 1.273495 TGAGATCCCTGCCTCTGAAGT 60.273 52.381 0.00 0.00 0.00 3.01
1740 4849 1.493861 TGAGATCCCTGCCTCTGAAG 58.506 55.000 0.00 0.00 0.00 3.02
1741 4850 1.956869 TTGAGATCCCTGCCTCTGAA 58.043 50.000 0.00 0.00 0.00 3.02
1742 4851 1.956869 TTTGAGATCCCTGCCTCTGA 58.043 50.000 0.00 0.00 0.00 3.27
1743 4852 2.641305 CTTTTGAGATCCCTGCCTCTG 58.359 52.381 0.00 0.00 0.00 3.35
1744 4853 1.064832 GCTTTTGAGATCCCTGCCTCT 60.065 52.381 0.00 0.00 0.00 3.69
1745 4854 1.064832 AGCTTTTGAGATCCCTGCCTC 60.065 52.381 0.00 0.00 0.00 4.70
1746 4855 0.998145 AGCTTTTGAGATCCCTGCCT 59.002 50.000 0.00 0.00 0.00 4.75
1747 4856 1.387539 GAGCTTTTGAGATCCCTGCC 58.612 55.000 0.00 0.00 0.00 4.85
1748 4857 1.012841 CGAGCTTTTGAGATCCCTGC 58.987 55.000 0.00 0.00 0.00 4.85
1749 4858 1.661341 CCGAGCTTTTGAGATCCCTG 58.339 55.000 0.00 0.00 0.00 4.45
1750 4859 0.543749 CCCGAGCTTTTGAGATCCCT 59.456 55.000 0.00 0.00 0.00 4.20
1751 4860 0.464554 CCCCGAGCTTTTGAGATCCC 60.465 60.000 0.00 0.00 0.00 3.85
1752 4861 1.098129 GCCCCGAGCTTTTGAGATCC 61.098 60.000 0.00 0.00 38.99 3.36
1753 4862 1.098129 GGCCCCGAGCTTTTGAGATC 61.098 60.000 0.00 0.00 43.05 2.75
1754 4863 1.077429 GGCCCCGAGCTTTTGAGAT 60.077 57.895 0.00 0.00 43.05 2.75
1755 4864 2.063015 TTGGCCCCGAGCTTTTGAGA 62.063 55.000 0.00 0.00 43.05 3.27
1756 4865 1.178534 TTTGGCCCCGAGCTTTTGAG 61.179 55.000 0.00 0.00 43.05 3.02
1757 4866 0.757188 TTTTGGCCCCGAGCTTTTGA 60.757 50.000 0.00 0.00 43.05 2.69
1758 4867 0.321346 ATTTTGGCCCCGAGCTTTTG 59.679 50.000 0.00 0.00 43.05 2.44
1759 4868 0.608130 GATTTTGGCCCCGAGCTTTT 59.392 50.000 0.00 0.00 43.05 2.27
1760 4869 1.595093 CGATTTTGGCCCCGAGCTTT 61.595 55.000 0.00 0.00 43.05 3.51
1761 4870 2.046285 CGATTTTGGCCCCGAGCTT 61.046 57.895 0.00 0.00 43.05 3.74
1762 4871 2.270874 ATCGATTTTGGCCCCGAGCT 62.271 55.000 0.00 0.00 43.05 4.09
1763 4872 1.384222 AATCGATTTTGGCCCCGAGC 61.384 55.000 4.39 0.00 42.60 5.03
1764 4873 1.065551 GAAATCGATTTTGGCCCCGAG 59.934 52.381 23.49 0.00 34.40 4.63
1765 4874 1.099689 GAAATCGATTTTGGCCCCGA 58.900 50.000 23.49 1.71 35.43 5.14
1766 4875 1.102978 AGAAATCGATTTTGGCCCCG 58.897 50.000 23.49 0.00 0.00 5.73
1767 4876 1.824852 ACAGAAATCGATTTTGGCCCC 59.175 47.619 23.49 10.37 0.00 5.80
1768 4877 3.253230 CAACAGAAATCGATTTTGGCCC 58.747 45.455 23.49 11.05 0.00 5.80
1769 4878 3.056891 TCCAACAGAAATCGATTTTGGCC 60.057 43.478 24.95 14.20 0.00 5.36
1770 4879 3.920412 GTCCAACAGAAATCGATTTTGGC 59.080 43.478 24.95 18.71 0.00 4.52
1771 4880 5.376854 AGTCCAACAGAAATCGATTTTGG 57.623 39.130 24.24 24.24 0.00 3.28
1772 4881 5.858581 GGAAGTCCAACAGAAATCGATTTTG 59.141 40.000 23.49 22.12 35.64 2.44
1773 4882 5.534654 TGGAAGTCCAACAGAAATCGATTTT 59.465 36.000 23.49 11.39 44.35 1.82
1774 4883 5.070001 TGGAAGTCCAACAGAAATCGATTT 58.930 37.500 22.93 22.93 44.35 2.17
1775 4884 4.651778 TGGAAGTCCAACAGAAATCGATT 58.348 39.130 4.39 4.39 44.35 3.34
1776 4885 4.286297 TGGAAGTCCAACAGAAATCGAT 57.714 40.909 0.00 0.00 44.35 3.59
1777 4886 3.762407 TGGAAGTCCAACAGAAATCGA 57.238 42.857 0.00 0.00 44.35 3.59
1788 4897 0.324943 GCAGCTTAGGTGGAAGTCCA 59.675 55.000 13.50 0.00 45.30 4.02
1789 4898 0.741221 CGCAGCTTAGGTGGAAGTCC 60.741 60.000 13.50 0.00 0.00 3.85
1790 4899 0.037232 ACGCAGCTTAGGTGGAAGTC 60.037 55.000 13.50 0.00 0.00 3.01
1791 4900 0.320771 CACGCAGCTTAGGTGGAAGT 60.321 55.000 13.50 0.00 0.00 3.01
1792 4901 2.460330 CACGCAGCTTAGGTGGAAG 58.540 57.895 13.50 0.00 0.00 3.46
1793 4902 4.693532 CACGCAGCTTAGGTGGAA 57.306 55.556 13.50 0.00 0.00 3.53
1796 4905 1.741770 GTCCCACGCAGCTTAGGTG 60.742 63.158 7.10 7.10 0.00 4.00
1797 4906 2.663196 GTCCCACGCAGCTTAGGT 59.337 61.111 0.00 0.00 0.00 3.08
1798 4907 2.125106 GGTCCCACGCAGCTTAGG 60.125 66.667 0.00 0.00 0.00 2.69
1799 4908 2.509336 CGGTCCCACGCAGCTTAG 60.509 66.667 0.00 0.00 0.00 2.18
1800 4909 2.992689 TCGGTCCCACGCAGCTTA 60.993 61.111 0.00 0.00 0.00 3.09
1801 4910 4.379243 CTCGGTCCCACGCAGCTT 62.379 66.667 0.00 0.00 0.00 3.74
1803 4912 4.803426 CTCTCGGTCCCACGCAGC 62.803 72.222 0.00 0.00 0.00 5.25
1804 4913 2.636412 TTCTCTCGGTCCCACGCAG 61.636 63.158 0.00 0.00 0.00 5.18
1805 4914 2.599281 TTCTCTCGGTCCCACGCA 60.599 61.111 0.00 0.00 0.00 5.24
1806 4915 2.126031 GTTCTCTCGGTCCCACGC 60.126 66.667 0.00 0.00 0.00 5.34
1807 4916 1.213013 CTGTTCTCTCGGTCCCACG 59.787 63.158 0.00 0.00 0.00 4.94
1808 4917 1.187087 ATCTGTTCTCTCGGTCCCAC 58.813 55.000 0.00 0.00 0.00 4.61
1809 4918 2.376109 GTATCTGTTCTCTCGGTCCCA 58.624 52.381 0.00 0.00 0.00 4.37
1810 4919 1.682323 GGTATCTGTTCTCTCGGTCCC 59.318 57.143 0.00 0.00 0.00 4.46
1811 4920 2.359531 CTGGTATCTGTTCTCTCGGTCC 59.640 54.545 0.00 0.00 0.00 4.46
1812 4921 3.018149 ACTGGTATCTGTTCTCTCGGTC 58.982 50.000 0.00 0.00 0.00 4.79
1813 4922 2.755655 CACTGGTATCTGTTCTCTCGGT 59.244 50.000 0.00 0.00 0.00 4.69
1814 4923 2.755655 ACACTGGTATCTGTTCTCTCGG 59.244 50.000 0.00 0.00 0.00 4.63
1815 4924 3.191581 ACACACTGGTATCTGTTCTCTCG 59.808 47.826 0.00 0.00 0.00 4.04
1816 4925 4.381079 GGACACACTGGTATCTGTTCTCTC 60.381 50.000 0.00 0.00 0.00 3.20
1817 4926 3.511934 GGACACACTGGTATCTGTTCTCT 59.488 47.826 0.00 0.00 0.00 3.10
1818 4927 3.511934 AGGACACACTGGTATCTGTTCTC 59.488 47.826 0.00 0.00 0.00 2.87
1819 4928 3.511477 AGGACACACTGGTATCTGTTCT 58.489 45.455 0.00 0.00 0.00 3.01
1820 4929 3.511934 AGAGGACACACTGGTATCTGTTC 59.488 47.826 0.00 0.00 0.00 3.18
1821 4930 3.259374 CAGAGGACACACTGGTATCTGTT 59.741 47.826 0.00 0.00 33.36 3.16
1822 4931 2.828520 CAGAGGACACACTGGTATCTGT 59.171 50.000 0.00 0.00 33.36 3.41
1823 4932 3.092301 TCAGAGGACACACTGGTATCTG 58.908 50.000 0.00 0.00 36.18 2.90
1824 4933 3.458044 TCAGAGGACACACTGGTATCT 57.542 47.619 0.00 0.00 36.18 1.98
1825 4934 3.258372 TGTTCAGAGGACACACTGGTATC 59.742 47.826 0.00 0.00 36.18 2.24
1826 4935 3.239449 TGTTCAGAGGACACACTGGTAT 58.761 45.455 0.00 0.00 36.18 2.73
1827 4936 2.673258 TGTTCAGAGGACACACTGGTA 58.327 47.619 0.00 0.00 36.18 3.25
1828 4937 1.496060 TGTTCAGAGGACACACTGGT 58.504 50.000 0.00 0.00 36.18 4.00
1829 4938 2.037641 TCATGTTCAGAGGACACACTGG 59.962 50.000 0.00 0.00 36.18 4.00
1830 4939 3.006217 TCTCATGTTCAGAGGACACACTG 59.994 47.826 0.00 0.00 36.75 3.66
1831 4940 3.234353 TCTCATGTTCAGAGGACACACT 58.766 45.455 0.00 0.00 33.92 3.55
1832 4941 3.256879 TCTCTCATGTTCAGAGGACACAC 59.743 47.826 9.39 0.00 38.39 3.82
1833 4942 3.500343 TCTCTCATGTTCAGAGGACACA 58.500 45.455 9.39 0.00 38.39 3.72
1834 4943 4.219507 TCTTCTCTCATGTTCAGAGGACAC 59.780 45.833 9.39 0.00 38.39 3.67
1835 4944 4.411013 TCTTCTCTCATGTTCAGAGGACA 58.589 43.478 9.39 0.00 38.39 4.02
1836 4945 5.167845 GTTCTTCTCTCATGTTCAGAGGAC 58.832 45.833 9.39 0.00 38.39 3.85
1837 4946 4.835056 TGTTCTTCTCTCATGTTCAGAGGA 59.165 41.667 9.39 1.24 38.39 3.71
1838 4947 5.144692 TGTTCTTCTCTCATGTTCAGAGG 57.855 43.478 9.39 3.07 38.39 3.69
1839 4948 5.170021 CCTGTTCTTCTCTCATGTTCAGAG 58.830 45.833 3.97 3.97 39.11 3.35
1840 4949 4.562347 GCCTGTTCTTCTCTCATGTTCAGA 60.562 45.833 0.00 0.00 0.00 3.27
1841 4950 3.683822 GCCTGTTCTTCTCTCATGTTCAG 59.316 47.826 0.00 0.00 0.00 3.02
1842 4951 3.557898 GGCCTGTTCTTCTCTCATGTTCA 60.558 47.826 0.00 0.00 0.00 3.18
1843 4952 3.006247 GGCCTGTTCTTCTCTCATGTTC 58.994 50.000 0.00 0.00 0.00 3.18
1844 4953 2.373169 TGGCCTGTTCTTCTCTCATGTT 59.627 45.455 3.32 0.00 0.00 2.71
1845 4954 1.980765 TGGCCTGTTCTTCTCTCATGT 59.019 47.619 3.32 0.00 0.00 3.21
1846 4955 2.775911 TGGCCTGTTCTTCTCTCATG 57.224 50.000 3.32 0.00 0.00 3.07
1847 4956 5.441718 TTAATGGCCTGTTCTTCTCTCAT 57.558 39.130 3.32 0.00 0.00 2.90
1848 4957 4.908601 TTAATGGCCTGTTCTTCTCTCA 57.091 40.909 3.32 0.00 0.00 3.27
1849 4958 5.123027 CAGTTTAATGGCCTGTTCTTCTCTC 59.877 44.000 3.32 0.00 0.00 3.20
1850 4959 5.006386 CAGTTTAATGGCCTGTTCTTCTCT 58.994 41.667 3.32 0.00 0.00 3.10
1851 4960 5.003804 TCAGTTTAATGGCCTGTTCTTCTC 58.996 41.667 3.32 0.00 0.00 2.87
1852 4961 4.985538 TCAGTTTAATGGCCTGTTCTTCT 58.014 39.130 3.32 0.00 0.00 2.85
1853 4962 5.705609 TTCAGTTTAATGGCCTGTTCTTC 57.294 39.130 3.32 0.00 0.00 2.87
1854 4963 5.539955 ACATTCAGTTTAATGGCCTGTTCTT 59.460 36.000 3.32 0.00 40.48 2.52
1855 4964 5.079643 ACATTCAGTTTAATGGCCTGTTCT 58.920 37.500 3.32 0.00 40.48 3.01
1856 4965 5.391312 ACATTCAGTTTAATGGCCTGTTC 57.609 39.130 3.32 0.00 40.48 3.18
1857 4966 5.772672 TGTACATTCAGTTTAATGGCCTGTT 59.227 36.000 3.32 1.17 40.48 3.16
1858 4967 5.183140 GTGTACATTCAGTTTAATGGCCTGT 59.817 40.000 3.32 0.00 40.48 4.00
1859 4968 5.182950 TGTGTACATTCAGTTTAATGGCCTG 59.817 40.000 3.32 0.00 40.48 4.85
1860 4969 5.321102 TGTGTACATTCAGTTTAATGGCCT 58.679 37.500 3.32 0.00 40.48 5.19
1861 4970 5.637006 TGTGTACATTCAGTTTAATGGCC 57.363 39.130 0.00 0.00 40.48 5.36
1862 4971 6.362283 GTGTTGTGTACATTCAGTTTAATGGC 59.638 38.462 0.00 0.00 40.48 4.40
1863 4972 7.421599 TGTGTTGTGTACATTCAGTTTAATGG 58.578 34.615 0.00 0.00 40.48 3.16
1864 4973 7.591057 CCTGTGTTGTGTACATTCAGTTTAATG 59.409 37.037 0.00 0.00 41.65 1.90
1865 4974 7.500892 TCCTGTGTTGTGTACATTCAGTTTAAT 59.499 33.333 0.00 0.00 39.39 1.40
1866 4975 6.824196 TCCTGTGTTGTGTACATTCAGTTTAA 59.176 34.615 0.00 0.00 39.39 1.52
1867 4976 6.350103 TCCTGTGTTGTGTACATTCAGTTTA 58.650 36.000 0.00 0.00 39.39 2.01
1868 4977 5.189928 TCCTGTGTTGTGTACATTCAGTTT 58.810 37.500 0.00 0.00 39.39 2.66
1869 4978 4.776349 TCCTGTGTTGTGTACATTCAGTT 58.224 39.130 0.00 0.00 39.39 3.16
1870 4979 4.380531 CTCCTGTGTTGTGTACATTCAGT 58.619 43.478 0.00 0.00 39.39 3.41
1871 4980 3.748048 CCTCCTGTGTTGTGTACATTCAG 59.252 47.826 0.00 4.11 39.39 3.02
1872 4981 3.389656 TCCTCCTGTGTTGTGTACATTCA 59.610 43.478 0.00 0.00 39.39 2.57
1873 4982 3.997021 CTCCTCCTGTGTTGTGTACATTC 59.003 47.826 0.00 0.00 39.39 2.67
1874 4983 3.646162 TCTCCTCCTGTGTTGTGTACATT 59.354 43.478 0.00 0.00 39.39 2.71
1875 4984 3.239449 TCTCCTCCTGTGTTGTGTACAT 58.761 45.455 0.00 0.00 39.39 2.29
1876 4985 2.628178 CTCTCCTCCTGTGTTGTGTACA 59.372 50.000 0.00 0.00 0.00 2.90
1877 4986 2.610727 GCTCTCCTCCTGTGTTGTGTAC 60.611 54.545 0.00 0.00 0.00 2.90
1878 4987 1.618837 GCTCTCCTCCTGTGTTGTGTA 59.381 52.381 0.00 0.00 0.00 2.90
1879 4988 0.394565 GCTCTCCTCCTGTGTTGTGT 59.605 55.000 0.00 0.00 0.00 3.72
1880 4989 0.683973 AGCTCTCCTCCTGTGTTGTG 59.316 55.000 0.00 0.00 0.00 3.33
1881 4990 2.175202 CTAGCTCTCCTCCTGTGTTGT 58.825 52.381 0.00 0.00 0.00 3.32
1882 4991 1.134848 GCTAGCTCTCCTCCTGTGTTG 60.135 57.143 7.70 0.00 0.00 3.33
1883 4992 1.190643 GCTAGCTCTCCTCCTGTGTT 58.809 55.000 7.70 0.00 0.00 3.32
1884 4993 0.334676 AGCTAGCTCTCCTCCTGTGT 59.665 55.000 12.68 0.00 0.00 3.72
1885 4994 1.032014 GAGCTAGCTCTCCTCCTGTG 58.968 60.000 32.98 0.00 39.80 3.66
1886 4995 3.513209 GAGCTAGCTCTCCTCCTGT 57.487 57.895 32.98 1.09 39.80 4.00
1895 5004 8.744652 TGATATTACTTGGATAAGAGCTAGCTC 58.255 37.037 33.21 33.21 43.03 4.09
1896 5005 8.657387 TGATATTACTTGGATAAGAGCTAGCT 57.343 34.615 19.45 19.45 37.36 3.32
1897 5006 9.883142 AATGATATTACTTGGATAAGAGCTAGC 57.117 33.333 6.62 6.62 37.36 3.42
1900 5009 9.941325 CTGAATGATATTACTTGGATAAGAGCT 57.059 33.333 0.00 0.00 37.36 4.09
1901 5010 8.663911 GCTGAATGATATTACTTGGATAAGAGC 58.336 37.037 0.00 0.00 37.36 4.09
1902 5011 9.716531 TGCTGAATGATATTACTTGGATAAGAG 57.283 33.333 0.00 0.00 37.36 2.85
1906 5015 9.066892 GGTTTGCTGAATGATATTACTTGGATA 57.933 33.333 0.00 0.00 0.00 2.59
1907 5016 7.560991 TGGTTTGCTGAATGATATTACTTGGAT 59.439 33.333 0.00 0.00 0.00 3.41
1908 5017 6.889177 TGGTTTGCTGAATGATATTACTTGGA 59.111 34.615 0.00 0.00 0.00 3.53
1909 5018 7.099266 TGGTTTGCTGAATGATATTACTTGG 57.901 36.000 0.00 0.00 0.00 3.61
1910 5019 8.407832 TCATGGTTTGCTGAATGATATTACTTG 58.592 33.333 0.00 0.00 0.00 3.16
1911 5020 8.523915 TCATGGTTTGCTGAATGATATTACTT 57.476 30.769 0.00 0.00 0.00 2.24
1912 5021 8.408601 GTTCATGGTTTGCTGAATGATATTACT 58.591 33.333 0.00 0.00 34.18 2.24
1913 5022 8.408601 AGTTCATGGTTTGCTGAATGATATTAC 58.591 33.333 0.00 0.00 34.18 1.89
1914 5023 8.523915 AGTTCATGGTTTGCTGAATGATATTA 57.476 30.769 0.00 0.00 34.18 0.98
1915 5024 7.414222 AGTTCATGGTTTGCTGAATGATATT 57.586 32.000 0.00 0.00 34.18 1.28
1916 5025 7.557358 TGTAGTTCATGGTTTGCTGAATGATAT 59.443 33.333 0.00 0.00 34.18 1.63
1917 5026 6.883756 TGTAGTTCATGGTTTGCTGAATGATA 59.116 34.615 0.00 0.00 34.18 2.15
1918 5027 5.711506 TGTAGTTCATGGTTTGCTGAATGAT 59.288 36.000 0.00 0.00 34.18 2.45
1919 5028 5.048782 GTGTAGTTCATGGTTTGCTGAATGA 60.049 40.000 0.00 0.00 34.18 2.57
1920 5029 5.156355 GTGTAGTTCATGGTTTGCTGAATG 58.844 41.667 0.00 0.00 34.18 2.67
1921 5030 4.826733 TGTGTAGTTCATGGTTTGCTGAAT 59.173 37.500 0.00 0.00 34.18 2.57
1922 5031 4.036262 GTGTGTAGTTCATGGTTTGCTGAA 59.964 41.667 0.00 0.00 0.00 3.02
1923 5032 3.563808 GTGTGTAGTTCATGGTTTGCTGA 59.436 43.478 0.00 0.00 0.00 4.26
1924 5033 3.314913 TGTGTGTAGTTCATGGTTTGCTG 59.685 43.478 0.00 0.00 0.00 4.41
1925 5034 3.550820 TGTGTGTAGTTCATGGTTTGCT 58.449 40.909 0.00 0.00 0.00 3.91
1926 5035 3.563808 TCTGTGTGTAGTTCATGGTTTGC 59.436 43.478 0.00 0.00 0.00 3.68
1927 5036 5.065859 TGTTCTGTGTGTAGTTCATGGTTTG 59.934 40.000 0.00 0.00 0.00 2.93
1928 5037 5.189928 TGTTCTGTGTGTAGTTCATGGTTT 58.810 37.500 0.00 0.00 0.00 3.27
1929 5038 4.776349 TGTTCTGTGTGTAGTTCATGGTT 58.224 39.130 0.00 0.00 0.00 3.67
1930 5039 4.415881 TGTTCTGTGTGTAGTTCATGGT 57.584 40.909 0.00 0.00 0.00 3.55
1931 5040 4.574421 TGTTGTTCTGTGTGTAGTTCATGG 59.426 41.667 0.00 0.00 0.00 3.66
1932 5041 5.733226 TGTTGTTCTGTGTGTAGTTCATG 57.267 39.130 0.00 0.00 0.00 3.07
1933 5042 9.151471 GTATATGTTGTTCTGTGTGTAGTTCAT 57.849 33.333 0.00 0.00 0.00 2.57
1934 5043 8.145122 TGTATATGTTGTTCTGTGTGTAGTTCA 58.855 33.333 0.00 0.00 0.00 3.18
1935 5044 8.528917 TGTATATGTTGTTCTGTGTGTAGTTC 57.471 34.615 0.00 0.00 0.00 3.01
1936 5045 9.151471 GATGTATATGTTGTTCTGTGTGTAGTT 57.849 33.333 0.00 0.00 0.00 2.24
1937 5046 7.764443 GGATGTATATGTTGTTCTGTGTGTAGT 59.236 37.037 0.00 0.00 0.00 2.73
1938 5047 7.043391 CGGATGTATATGTTGTTCTGTGTGTAG 60.043 40.741 0.00 0.00 0.00 2.74
1939 5048 6.754675 CGGATGTATATGTTGTTCTGTGTGTA 59.245 38.462 0.00 0.00 0.00 2.90
1940 5049 5.580691 CGGATGTATATGTTGTTCTGTGTGT 59.419 40.000 0.00 0.00 0.00 3.72
1941 5050 5.580691 ACGGATGTATATGTTGTTCTGTGTG 59.419 40.000 0.00 0.00 0.00 3.82
1942 5051 5.730550 ACGGATGTATATGTTGTTCTGTGT 58.269 37.500 0.00 0.00 0.00 3.72
1943 5052 7.438160 ACATACGGATGTATATGTTGTTCTGTG 59.562 37.037 12.79 0.00 44.77 3.66
1944 5053 7.497595 ACATACGGATGTATATGTTGTTCTGT 58.502 34.615 12.79 0.00 44.77 3.41
1945 5054 7.946655 ACATACGGATGTATATGTTGTTCTG 57.053 36.000 12.79 0.00 44.77 3.02
1946 5055 8.857098 ACTACATACGGATGTATATGTTGTTCT 58.143 33.333 20.64 0.00 45.42 3.01
1947 5056 9.125906 GACTACATACGGATGTATATGTTGTTC 57.874 37.037 20.64 5.45 45.42 3.18
1948 5057 8.635328 TGACTACATACGGATGTATATGTTGTT 58.365 33.333 20.64 0.21 45.42 2.83
1949 5058 8.173542 TGACTACATACGGATGTATATGTTGT 57.826 34.615 20.64 13.54 45.42 3.32
1950 5059 9.639601 AATGACTACATACGGATGTATATGTTG 57.360 33.333 20.64 10.47 45.42 3.33
1958 5067 9.778741 ATTTCAATAATGACTACATACGGATGT 57.221 29.630 19.12 19.12 41.49 3.06
1961 5070 9.692749 GAGATTTCAATAATGACTACATACGGA 57.307 33.333 0.00 0.00 34.61 4.69
1962 5071 9.698309 AGAGATTTCAATAATGACTACATACGG 57.302 33.333 0.00 0.00 34.61 4.02
1970 5079 9.692325 AGCCTTTTAGAGATTTCAATAATGACT 57.308 29.630 0.00 0.00 34.61 3.41
1988 5097 9.886132 CCTCTGTTTCTAAGTATAAGCCTTTTA 57.114 33.333 0.00 0.00 0.00 1.52
1989 5098 7.829706 CCCTCTGTTTCTAAGTATAAGCCTTTT 59.170 37.037 0.00 0.00 0.00 2.27
1990 5099 7.182206 TCCCTCTGTTTCTAAGTATAAGCCTTT 59.818 37.037 0.00 0.00 0.00 3.11
1991 5100 6.672657 TCCCTCTGTTTCTAAGTATAAGCCTT 59.327 38.462 0.00 0.00 0.00 4.35
1992 5101 6.203072 TCCCTCTGTTTCTAAGTATAAGCCT 58.797 40.000 0.00 0.00 0.00 4.58
1993 5102 6.098552 ACTCCCTCTGTTTCTAAGTATAAGCC 59.901 42.308 0.00 0.00 0.00 4.35
1994 5103 7.114866 ACTCCCTCTGTTTCTAAGTATAAGC 57.885 40.000 0.00 0.00 0.00 3.09
1997 5106 9.710818 ACAATACTCCCTCTGTTTCTAAGTATA 57.289 33.333 0.00 0.00 30.48 1.47
1998 5107 8.611051 ACAATACTCCCTCTGTTTCTAAGTAT 57.389 34.615 0.00 0.00 31.59 2.12
1999 5108 8.431910 AACAATACTCCCTCTGTTTCTAAGTA 57.568 34.615 0.00 0.00 0.00 2.24
2000 5109 6.936968 ACAATACTCCCTCTGTTTCTAAGT 57.063 37.500 0.00 0.00 0.00 2.24
2001 5110 9.720769 TTAAACAATACTCCCTCTGTTTCTAAG 57.279 33.333 2.55 0.00 40.28 2.18
2003 5112 9.886132 GATTAAACAATACTCCCTCTGTTTCTA 57.114 33.333 2.55 0.00 40.28 2.10
2004 5113 8.606830 AGATTAAACAATACTCCCTCTGTTTCT 58.393 33.333 2.55 0.00 40.28 2.52
2005 5114 8.794335 AGATTAAACAATACTCCCTCTGTTTC 57.206 34.615 2.55 0.00 40.28 2.78
2006 5115 9.668497 GTAGATTAAACAATACTCCCTCTGTTT 57.332 33.333 4.63 4.63 42.83 2.83
2007 5116 9.047947 AGTAGATTAAACAATACTCCCTCTGTT 57.952 33.333 0.00 0.00 33.51 3.16
2008 5117 8.611051 AGTAGATTAAACAATACTCCCTCTGT 57.389 34.615 0.00 0.00 0.00 3.41
2009 5118 8.919145 AGAGTAGATTAAACAATACTCCCTCTG 58.081 37.037 7.42 0.00 43.29 3.35
2012 5121 9.145442 GGTAGAGTAGATTAAACAATACTCCCT 57.855 37.037 7.42 0.00 43.29 4.20
2013 5122 9.145442 AGGTAGAGTAGATTAAACAATACTCCC 57.855 37.037 7.42 3.86 43.29 4.30
2017 5126 9.609950 CGCTAGGTAGAGTAGATTAAACAATAC 57.390 37.037 0.00 0.00 0.00 1.89
2018 5127 8.790718 CCGCTAGGTAGAGTAGATTAAACAATA 58.209 37.037 0.00 0.00 0.00 1.90
2029 5138 3.243134 GCTTGTTCCGCTAGGTAGAGTAG 60.243 52.174 0.00 0.00 39.05 2.57
2030 5139 2.686915 GCTTGTTCCGCTAGGTAGAGTA 59.313 50.000 0.00 0.00 39.05 2.59
2031 5140 1.477295 GCTTGTTCCGCTAGGTAGAGT 59.523 52.381 0.00 0.00 39.05 3.24
2032 5141 1.476891 TGCTTGTTCCGCTAGGTAGAG 59.523 52.381 0.00 0.00 39.05 2.43
2033 5142 1.476891 CTGCTTGTTCCGCTAGGTAGA 59.523 52.381 0.00 0.00 39.05 2.59
2034 5143 1.204941 ACTGCTTGTTCCGCTAGGTAG 59.795 52.381 0.00 0.00 39.05 3.18
2035 5144 1.203994 GACTGCTTGTTCCGCTAGGTA 59.796 52.381 0.00 0.00 39.05 3.08
2036 5145 0.037232 GACTGCTTGTTCCGCTAGGT 60.037 55.000 0.00 0.00 39.05 3.08
2037 5146 0.741221 GGACTGCTTGTTCCGCTAGG 60.741 60.000 0.00 0.00 39.46 3.02
2038 5147 0.037326 TGGACTGCTTGTTCCGCTAG 60.037 55.000 0.00 0.00 0.00 3.42
2039 5148 0.037326 CTGGACTGCTTGTTCCGCTA 60.037 55.000 0.00 0.00 0.00 4.26
2040 5149 1.302033 CTGGACTGCTTGTTCCGCT 60.302 57.895 0.00 0.00 0.00 5.52
2041 5150 0.320421 TACTGGACTGCTTGTTCCGC 60.320 55.000 0.00 0.00 0.00 5.54
2042 5151 2.163818 TTACTGGACTGCTTGTTCCG 57.836 50.000 0.00 0.00 0.00 4.30
2043 5152 5.453567 AAATTTACTGGACTGCTTGTTCC 57.546 39.130 0.00 0.00 0.00 3.62
2044 5153 5.147162 CGAAATTTACTGGACTGCTTGTTC 58.853 41.667 0.00 0.00 0.00 3.18
2045 5154 4.578928 ACGAAATTTACTGGACTGCTTGTT 59.421 37.500 0.00 0.00 0.00 2.83
2046 5155 4.024048 CACGAAATTTACTGGACTGCTTGT 60.024 41.667 0.00 0.00 0.00 3.16
2047 5156 4.213270 TCACGAAATTTACTGGACTGCTTG 59.787 41.667 0.00 0.00 0.00 4.01
2048 5157 4.385825 TCACGAAATTTACTGGACTGCTT 58.614 39.130 0.00 0.00 0.00 3.91
2049 5158 4.002906 TCACGAAATTTACTGGACTGCT 57.997 40.909 0.00 0.00 0.00 4.24
2050 5159 4.946784 ATCACGAAATTTACTGGACTGC 57.053 40.909 0.00 0.00 0.00 4.40
2051 5160 8.286800 TGTTTAATCACGAAATTTACTGGACTG 58.713 33.333 0.00 0.00 0.00 3.51
2052 5161 8.287503 GTGTTTAATCACGAAATTTACTGGACT 58.712 33.333 1.06 0.00 0.00 3.85
2053 5162 8.287503 AGTGTTTAATCACGAAATTTACTGGAC 58.712 33.333 10.29 0.00 42.40 4.02
2054 5163 8.385898 AGTGTTTAATCACGAAATTTACTGGA 57.614 30.769 10.29 0.00 42.40 3.86
2055 5164 8.901748 CAAGTGTTTAATCACGAAATTTACTGG 58.098 33.333 10.29 0.00 42.40 4.00
2056 5165 9.445786 ACAAGTGTTTAATCACGAAATTTACTG 57.554 29.630 10.29 0.00 42.40 2.74
2062 5171 9.445786 CAAGTAACAAGTGTTTAATCACGAAAT 57.554 29.630 10.29 3.28 42.40 2.17
2063 5172 8.452534 ACAAGTAACAAGTGTTTAATCACGAAA 58.547 29.630 10.29 0.00 42.40 3.46
2064 5173 7.976826 ACAAGTAACAAGTGTTTAATCACGAA 58.023 30.769 10.29 0.00 42.40 3.85
2065 5174 7.542534 ACAAGTAACAAGTGTTTAATCACGA 57.457 32.000 10.29 0.00 42.40 4.35
2066 5175 7.524861 CGTACAAGTAACAAGTGTTTAATCACG 59.475 37.037 10.29 3.04 42.40 4.35
2067 5176 8.542132 TCGTACAAGTAACAAGTGTTTAATCAC 58.458 33.333 8.36 8.36 39.31 3.06
2068 5177 8.645730 TCGTACAAGTAACAAGTGTTTAATCA 57.354 30.769 1.35 0.00 39.31 2.57
2069 5178 9.525007 CATCGTACAAGTAACAAGTGTTTAATC 57.475 33.333 1.35 0.00 39.31 1.75
2070 5179 9.263538 TCATCGTACAAGTAACAAGTGTTTAAT 57.736 29.630 1.35 0.00 39.31 1.40
2071 5180 8.645730 TCATCGTACAAGTAACAAGTGTTTAA 57.354 30.769 1.35 0.00 39.31 1.52
2072 5181 8.645730 TTCATCGTACAAGTAACAAGTGTTTA 57.354 30.769 1.35 0.00 39.31 2.01
2073 5182 7.542534 TTCATCGTACAAGTAACAAGTGTTT 57.457 32.000 1.35 0.00 39.31 2.83
2074 5183 7.542534 TTTCATCGTACAAGTAACAAGTGTT 57.457 32.000 1.75 1.75 41.73 3.32
2075 5184 7.724305 ATTTCATCGTACAAGTAACAAGTGT 57.276 32.000 0.00 0.00 0.00 3.55
2076 5185 9.525007 GTTATTTCATCGTACAAGTAACAAGTG 57.475 33.333 0.00 0.00 29.56 3.16
2077 5186 9.263538 TGTTATTTCATCGTACAAGTAACAAGT 57.736 29.630 8.41 0.00 33.95 3.16
2084 5193 8.612619 GGATCATTGTTATTTCATCGTACAAGT 58.387 33.333 0.00 0.00 32.84 3.16
2085 5194 8.830580 AGGATCATTGTTATTTCATCGTACAAG 58.169 33.333 0.00 0.00 32.84 3.16
2086 5195 8.731275 AGGATCATTGTTATTTCATCGTACAA 57.269 30.769 0.00 0.00 33.73 2.41
2087 5196 8.731275 AAGGATCATTGTTATTTCATCGTACA 57.269 30.769 0.00 0.00 0.00 2.90
2088 5197 8.826710 TGAAGGATCATTGTTATTTCATCGTAC 58.173 33.333 0.00 0.00 0.00 3.67
2089 5198 8.826710 GTGAAGGATCATTGTTATTTCATCGTA 58.173 33.333 0.00 0.00 38.01 3.43
2090 5199 7.336679 TGTGAAGGATCATTGTTATTTCATCGT 59.663 33.333 0.00 0.00 38.01 3.73
2091 5200 7.696755 TGTGAAGGATCATTGTTATTTCATCG 58.303 34.615 0.00 0.00 38.01 3.84
2092 5201 8.896744 TCTGTGAAGGATCATTGTTATTTCATC 58.103 33.333 0.00 0.00 38.01 2.92
2093 5202 8.812513 TCTGTGAAGGATCATTGTTATTTCAT 57.187 30.769 0.00 0.00 38.01 2.57
2094 5203 7.884877 ACTCTGTGAAGGATCATTGTTATTTCA 59.115 33.333 0.00 0.00 38.01 2.69
2095 5204 8.273780 ACTCTGTGAAGGATCATTGTTATTTC 57.726 34.615 0.00 0.00 38.01 2.17
2096 5205 9.167311 GTACTCTGTGAAGGATCATTGTTATTT 57.833 33.333 0.00 0.00 38.01 1.40
2097 5206 8.321353 TGTACTCTGTGAAGGATCATTGTTATT 58.679 33.333 0.00 0.00 38.01 1.40
2098 5207 7.766278 GTGTACTCTGTGAAGGATCATTGTTAT 59.234 37.037 0.00 0.00 38.01 1.89
2099 5208 7.097192 GTGTACTCTGTGAAGGATCATTGTTA 58.903 38.462 0.00 0.00 38.01 2.41
2100 5209 5.934625 GTGTACTCTGTGAAGGATCATTGTT 59.065 40.000 0.00 0.00 38.01 2.83
2101 5210 5.012046 TGTGTACTCTGTGAAGGATCATTGT 59.988 40.000 0.00 0.00 38.01 2.71
2102 5211 5.482006 TGTGTACTCTGTGAAGGATCATTG 58.518 41.667 0.00 0.00 38.01 2.82
2103 5212 5.247110 ACTGTGTACTCTGTGAAGGATCATT 59.753 40.000 6.66 0.00 38.01 2.57
2104 5213 4.774726 ACTGTGTACTCTGTGAAGGATCAT 59.225 41.667 6.66 0.00 38.01 2.45
2105 5214 4.152647 ACTGTGTACTCTGTGAAGGATCA 58.847 43.478 6.66 0.00 0.00 2.92
2106 5215 4.792521 ACTGTGTACTCTGTGAAGGATC 57.207 45.455 6.66 0.00 0.00 3.36
2107 5216 5.077564 TGTACTGTGTACTCTGTGAAGGAT 58.922 41.667 15.24 0.00 0.00 3.24
2108 5217 4.466827 TGTACTGTGTACTCTGTGAAGGA 58.533 43.478 15.24 0.00 0.00 3.36
2109 5218 4.848562 TGTACTGTGTACTCTGTGAAGG 57.151 45.455 15.24 0.00 0.00 3.46
2110 5219 6.216569 ACATTGTACTGTGTACTCTGTGAAG 58.783 40.000 15.24 0.00 0.00 3.02
2111 5220 6.156748 ACATTGTACTGTGTACTCTGTGAA 57.843 37.500 15.24 9.49 0.00 3.18
2112 5221 5.784578 ACATTGTACTGTGTACTCTGTGA 57.215 39.130 15.24 4.58 0.00 3.58
2113 5222 6.921307 TGTAACATTGTACTGTGTACTCTGTG 59.079 38.462 15.24 3.68 0.00 3.66
2114 5223 7.013942 TCTGTAACATTGTACTGTGTACTCTGT 59.986 37.037 11.45 11.45 0.00 3.41
2115 5224 7.368059 TCTGTAACATTGTACTGTGTACTCTG 58.632 38.462 8.94 0.00 0.00 3.35
2116 5225 7.520451 TCTGTAACATTGTACTGTGTACTCT 57.480 36.000 8.94 0.00 0.00 3.24
2117 5226 8.027189 TCATCTGTAACATTGTACTGTGTACTC 58.973 37.037 8.94 0.00 0.00 2.59
2118 5227 7.892609 TCATCTGTAACATTGTACTGTGTACT 58.107 34.615 8.94 0.00 0.00 2.73
2119 5228 7.201444 GCTCATCTGTAACATTGTACTGTGTAC 60.201 40.741 4.52 1.33 0.00 2.90
2120 5229 6.811665 GCTCATCTGTAACATTGTACTGTGTA 59.188 38.462 4.52 0.00 0.00 2.90
2121 5230 5.639506 GCTCATCTGTAACATTGTACTGTGT 59.360 40.000 0.00 0.00 0.00 3.72
2122 5231 5.063944 GGCTCATCTGTAACATTGTACTGTG 59.936 44.000 0.00 0.00 0.00 3.66
2123 5232 5.178797 GGCTCATCTGTAACATTGTACTGT 58.821 41.667 0.00 0.00 0.00 3.55
2124 5233 4.572389 GGGCTCATCTGTAACATTGTACTG 59.428 45.833 0.00 0.00 0.00 2.74
2125 5234 4.225042 TGGGCTCATCTGTAACATTGTACT 59.775 41.667 0.00 0.00 0.00 2.73
2126 5235 4.513442 TGGGCTCATCTGTAACATTGTAC 58.487 43.478 0.00 0.00 0.00 2.90
2127 5236 4.469586 TCTGGGCTCATCTGTAACATTGTA 59.530 41.667 0.00 0.00 0.00 2.41
2128 5237 3.264193 TCTGGGCTCATCTGTAACATTGT 59.736 43.478 0.00 0.00 0.00 2.71
2129 5238 3.877559 TCTGGGCTCATCTGTAACATTG 58.122 45.455 0.00 0.00 0.00 2.82
2130 5239 4.164796 TCATCTGGGCTCATCTGTAACATT 59.835 41.667 0.00 0.00 0.00 2.71
2131 5240 3.713248 TCATCTGGGCTCATCTGTAACAT 59.287 43.478 0.00 0.00 0.00 2.71
2132 5241 3.106827 TCATCTGGGCTCATCTGTAACA 58.893 45.455 0.00 0.00 0.00 2.41
2133 5242 3.827008 TCATCTGGGCTCATCTGTAAC 57.173 47.619 0.00 0.00 0.00 2.50
2134 5243 5.131642 AGAAATCATCTGGGCTCATCTGTAA 59.868 40.000 0.00 0.00 36.88 2.41
2135 5244 4.657504 AGAAATCATCTGGGCTCATCTGTA 59.342 41.667 0.00 0.00 36.88 2.74
2136 5245 3.458857 AGAAATCATCTGGGCTCATCTGT 59.541 43.478 0.00 0.00 36.88 3.41
2137 5246 4.088056 AGAAATCATCTGGGCTCATCTG 57.912 45.455 0.00 0.00 36.88 2.90
2138 5247 4.041444 GGTAGAAATCATCTGGGCTCATCT 59.959 45.833 0.00 0.00 39.30 2.90
2139 5248 4.202398 TGGTAGAAATCATCTGGGCTCATC 60.202 45.833 0.00 0.00 39.30 2.92
2140 5249 3.718434 TGGTAGAAATCATCTGGGCTCAT 59.282 43.478 0.00 0.00 39.30 2.90
2141 5250 3.114606 TGGTAGAAATCATCTGGGCTCA 58.885 45.455 0.00 0.00 39.30 4.26
2142 5251 3.845781 TGGTAGAAATCATCTGGGCTC 57.154 47.619 0.00 0.00 39.30 4.70
2143 5252 3.181436 CCATGGTAGAAATCATCTGGGCT 60.181 47.826 2.57 0.00 39.30 5.19
2144 5253 3.152341 CCATGGTAGAAATCATCTGGGC 58.848 50.000 2.57 0.00 39.30 5.36
2145 5254 3.759581 CCCATGGTAGAAATCATCTGGG 58.240 50.000 11.73 0.00 39.30 4.45
2146 5255 3.152341 GCCCATGGTAGAAATCATCTGG 58.848 50.000 11.73 0.00 39.30 3.86
2147 5256 3.819337 CAGCCCATGGTAGAAATCATCTG 59.181 47.826 11.73 0.00 39.30 2.90
2148 5257 3.461085 ACAGCCCATGGTAGAAATCATCT 59.539 43.478 11.73 0.00 42.48 2.90
2149 5258 3.825328 ACAGCCCATGGTAGAAATCATC 58.175 45.455 11.73 0.00 0.00 2.92
2150 5259 3.959495 ACAGCCCATGGTAGAAATCAT 57.041 42.857 11.73 0.00 0.00 2.45
2151 5260 3.620488 GAACAGCCCATGGTAGAAATCA 58.380 45.455 11.73 0.00 0.00 2.57
2152 5261 2.952310 GGAACAGCCCATGGTAGAAATC 59.048 50.000 11.73 1.72 0.00 2.17
2153 5262 2.582636 AGGAACAGCCCATGGTAGAAAT 59.417 45.455 11.73 0.00 37.37 2.17
2154 5263 1.992557 AGGAACAGCCCATGGTAGAAA 59.007 47.619 11.73 0.00 37.37 2.52
2155 5264 1.281867 CAGGAACAGCCCATGGTAGAA 59.718 52.381 11.73 0.00 37.37 2.10
2156 5265 0.911769 CAGGAACAGCCCATGGTAGA 59.088 55.000 11.73 0.00 37.37 2.59
2157 5266 0.911769 TCAGGAACAGCCCATGGTAG 59.088 55.000 11.73 2.21 37.37 3.18
2158 5267 1.595311 ATCAGGAACAGCCCATGGTA 58.405 50.000 11.73 0.00 37.37 3.25
2159 5268 0.706433 AATCAGGAACAGCCCATGGT 59.294 50.000 11.73 0.00 37.37 3.55
2160 5269 1.108776 CAATCAGGAACAGCCCATGG 58.891 55.000 4.14 4.14 37.37 3.66
2161 5270 2.022195 CTCAATCAGGAACAGCCCATG 58.978 52.381 0.00 0.00 37.37 3.66
2162 5271 1.684248 GCTCAATCAGGAACAGCCCAT 60.684 52.381 0.00 0.00 37.37 4.00
2163 5272 0.322816 GCTCAATCAGGAACAGCCCA 60.323 55.000 0.00 0.00 37.37 5.36
2164 5273 0.322816 TGCTCAATCAGGAACAGCCC 60.323 55.000 0.00 0.00 37.37 5.19
2165 5274 1.538047 TTGCTCAATCAGGAACAGCC 58.462 50.000 0.00 0.00 0.00 4.85
2166 5275 3.648339 TTTTGCTCAATCAGGAACAGC 57.352 42.857 0.00 0.00 30.89 4.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.