Multiple sequence alignment - TraesCS4A01G450300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G450300 chr4A 100.000 7058 0 0 1 7058 715882133 715875076 0.000000e+00 13034.0
1 TraesCS4A01G450300 chr4A 94.287 2328 96 11 2022 4337 715713841 715716143 0.000000e+00 3528.0
2 TraesCS4A01G450300 chr4A 94.510 929 26 2 4724 5652 715716136 715717039 0.000000e+00 1410.0
3 TraesCS4A01G450300 chr4A 94.767 707 30 5 1335 2036 715712416 715713120 0.000000e+00 1094.0
4 TraesCS4A01G450300 chr4A 92.823 627 38 6 717 1337 715711398 715712023 0.000000e+00 902.0
5 TraesCS4A01G450300 chr4A 88.746 702 59 9 5734 6416 715717038 715717738 0.000000e+00 841.0
6 TraesCS4A01G450300 chr4A 89.291 635 68 0 6424 7058 715751907 715752541 0.000000e+00 797.0
7 TraesCS4A01G450300 chr4A 83.289 760 77 21 1 717 690122921 690122169 0.000000e+00 654.0
8 TraesCS4A01G450300 chr4A 85.962 634 50 19 94 717 626005752 626006356 5.970000e-180 641.0
9 TraesCS4A01G450300 chr4A 85.974 606 73 10 6424 7027 715744794 715745389 7.720000e-179 638.0
10 TraesCS4A01G450300 chr4A 87.365 554 65 3 6430 6982 715818266 715817717 1.290000e-176 630.0
11 TraesCS4A01G450300 chr4A 86.496 548 69 3 6424 6970 715791515 715792058 1.310000e-166 597.0
12 TraesCS4A01G450300 chr4A 84.712 556 82 3 6424 6979 715810019 715809467 2.880000e-153 553.0
13 TraesCS4A01G450300 chr4A 90.281 391 28 7 4338 4723 668444593 668444208 2.940000e-138 503.0
14 TraesCS4A01G450300 chr4A 84.545 110 6 5 13 113 626005627 626005734 1.620000e-16 99.0
15 TraesCS4A01G450300 chr7A 94.601 3019 132 16 1333 4334 17364901 17361897 0.000000e+00 4643.0
16 TraesCS4A01G450300 chr7A 94.559 919 26 1 4734 5652 17361900 17361006 0.000000e+00 1399.0
17 TraesCS4A01G450300 chr7A 92.576 687 28 13 5734 6416 17361007 17360340 0.000000e+00 965.0
18 TraesCS4A01G450300 chr7A 91.223 638 52 3 6422 7058 17337793 17337159 0.000000e+00 865.0
19 TraesCS4A01G450300 chr7A 90.779 629 47 4 717 1337 17365901 17365276 0.000000e+00 830.0
20 TraesCS4A01G450300 chr7A 85.246 610 85 4 6424 7033 17347750 17347146 2.160000e-174 623.0
21 TraesCS4A01G450300 chr7A 96.667 90 3 0 5651 5740 7041022 7041111 4.410000e-32 150.0
22 TraesCS4A01G450300 chr7A 88.034 117 11 3 5619 5735 608509100 608509213 1.230000e-27 135.0
23 TraesCS4A01G450300 chr7A 95.122 41 2 0 6306 6346 62178400 62178440 1.640000e-06 65.8
24 TraesCS4A01G450300 chr7D 95.695 2021 75 9 2320 4334 17869443 17867429 0.000000e+00 3240.0
25 TraesCS4A01G450300 chr7D 94.147 1008 38 6 1333 2321 17870542 17869537 0.000000e+00 1515.0
26 TraesCS4A01G450300 chr7D 95.756 919 31 1 4734 5652 17867432 17866522 0.000000e+00 1474.0
27 TraesCS4A01G450300 chr7D 95.640 688 21 3 5734 6416 17866523 17865840 0.000000e+00 1096.0
28 TraesCS4A01G450300 chr7D 90.431 627 50 5 717 1337 17871535 17870913 0.000000e+00 817.0
29 TraesCS4A01G450300 chr7D 89.134 635 69 0 6424 7058 17850174 17849540 0.000000e+00 791.0
30 TraesCS4A01G450300 chr7D 85.849 636 83 6 6424 7058 17860136 17859507 0.000000e+00 669.0
31 TraesCS4A01G450300 chr7D 90.931 408 15 8 4336 4724 8991347 8991751 4.850000e-146 529.0
32 TraesCS4A01G450300 chr7D 89.059 393 26 7 4338 4717 397381185 397381573 8.290000e-129 472.0
33 TraesCS4A01G450300 chr7D 94.681 94 4 1 5643 5736 104453569 104453477 2.050000e-30 145.0
34 TraesCS4A01G450300 chr7D 86.777 121 13 3 5618 5736 587848252 587848133 1.600000e-26 132.0
35 TraesCS4A01G450300 chr2B 80.523 1263 179 44 3129 4334 629102887 629104139 0.000000e+00 907.0
36 TraesCS4A01G450300 chr2B 84.727 825 116 6 4792 5609 629104198 629105019 0.000000e+00 817.0
37 TraesCS4A01G450300 chr2B 87.163 631 68 10 96 717 245099176 245099802 0.000000e+00 704.0
38 TraesCS4A01G450300 chr2B 82.071 792 127 9 4843 5628 629022021 629022803 0.000000e+00 662.0
39 TraesCS4A01G450300 chr2B 78.152 1039 165 45 3196 4184 629020544 629021570 7.830000e-169 604.0
40 TraesCS4A01G450300 chr2B 89.796 392 29 5 4341 4723 66552976 66552587 6.360000e-135 492.0
41 TraesCS4A01G450300 chr2B 88.604 351 28 10 5734 6075 629105053 629105400 3.940000e-112 416.0
42 TraesCS4A01G450300 chr2B 85.854 410 35 10 4338 4724 165517600 165517191 1.420000e-111 414.0
43 TraesCS4A01G450300 chr2B 85.308 211 31 0 5769 5979 629123838 629124048 1.190000e-52 219.0
44 TraesCS4A01G450300 chr2B 77.157 394 68 19 2381 2771 629019412 629019786 7.170000e-50 209.0
45 TraesCS4A01G450300 chr2D 79.589 1264 192 48 3128 4334 529544665 529545919 0.000000e+00 845.0
46 TraesCS4A01G450300 chr2D 84.262 826 118 8 4792 5609 529545978 529546799 0.000000e+00 795.0
47 TraesCS4A01G450300 chr2D 78.093 1091 182 36 3196 4245 529534350 529535424 7.720000e-179 638.0
48 TraesCS4A01G450300 chr2D 81.439 792 132 9 4843 5628 529535693 529536475 9.990000e-178 634.0
49 TraesCS4A01G450300 chr2D 89.552 402 24 10 4332 4723 110750811 110751204 1.770000e-135 494.0
50 TraesCS4A01G450300 chr2D 85.819 409 41 12 5734 6128 529546833 529547238 1.100000e-112 418.0
51 TraesCS4A01G450300 chr2D 85.841 339 43 5 5734 6070 529536485 529536820 8.710000e-94 355.0
52 TraesCS4A01G450300 chr2D 78.230 418 66 20 2381 2795 529533263 529533658 1.970000e-60 244.0
53 TraesCS4A01G450300 chr2D 84.762 210 32 0 5771 5980 529557484 529557693 1.990000e-50 211.0
54 TraesCS4A01G450300 chr2D 90.566 106 8 2 5646 5750 27254947 27254843 9.550000e-29 139.0
55 TraesCS4A01G450300 chr2D 92.000 50 4 0 2714 2763 46686627 46686676 3.530000e-08 71.3
56 TraesCS4A01G450300 chr2A 79.746 1259 180 49 3129 4338 674047092 674048324 0.000000e+00 843.0
57 TraesCS4A01G450300 chr2A 83.879 825 122 7 4792 5609 674048372 674049192 0.000000e+00 776.0
58 TraesCS4A01G450300 chr2A 82.093 793 125 11 4843 5628 674028860 674029642 0.000000e+00 662.0
59 TraesCS4A01G450300 chr2A 77.564 1092 187 41 3196 4246 674027515 674028589 2.180000e-169 606.0
60 TraesCS4A01G450300 chr2A 87.912 364 37 6 5769 6128 674049267 674049627 8.460000e-114 422.0
61 TraesCS4A01G450300 chr2A 80.201 298 46 9 2502 2795 674026489 674026777 1.990000e-50 211.0
62 TraesCS4A01G450300 chr1D 88.468 633 55 11 94 717 6729395 6728772 0.000000e+00 749.0
63 TraesCS4A01G450300 chr1D 92.929 99 5 2 5643 5741 467803503 467803599 7.380000e-30 143.0
64 TraesCS4A01G450300 chr1D 88.679 106 4 2 1 98 6729536 6729431 9.610000e-24 122.0
65 TraesCS4A01G450300 chr6A 83.849 743 87 16 1 717 494174874 494175609 0.000000e+00 676.0
66 TraesCS4A01G450300 chr3B 83.115 764 78 17 1 720 129304503 129305259 0.000000e+00 649.0
67 TraesCS4A01G450300 chr3B 85.676 370 43 9 356 717 763640016 763639649 1.440000e-101 381.0
68 TraesCS4A01G450300 chr3D 83.113 758 77 16 2 720 544775512 544774767 1.660000e-180 643.0
69 TraesCS4A01G450300 chr3D 94.444 36 2 0 6304 6339 32275939 32275904 1.000000e-03 56.5
70 TraesCS4A01G450300 chr4D 89.800 500 39 7 94 583 35519627 35519130 1.290000e-176 630.0
71 TraesCS4A01G450300 chr4D 90.306 392 25 6 4339 4723 452805840 452806225 1.060000e-137 501.0
72 TraesCS4A01G450300 chr4D 87.500 104 7 1 1 98 35519766 35519663 1.610000e-21 115.0
73 TraesCS4A01G450300 chr7B 89.594 394 27 9 4338 4723 103562738 103563125 8.230000e-134 488.0
74 TraesCS4A01G450300 chr7B 85.714 245 20 6 1 233 54250255 54250496 1.970000e-60 244.0
75 TraesCS4A01G450300 chr5B 89.258 391 31 8 4338 4723 544809564 544809948 4.950000e-131 479.0
76 TraesCS4A01G450300 chr5B 89.231 390 28 9 4339 4723 394015877 394016257 6.410000e-130 475.0
77 TraesCS4A01G450300 chr5B 83.398 518 72 12 212 717 85003567 85004082 1.070000e-127 468.0
78 TraesCS4A01G450300 chr6B 87.761 335 39 2 382 715 17866516 17866183 2.390000e-104 390.0
79 TraesCS4A01G450300 chr5D 93.137 102 6 1 5642 5743 483518286 483518186 1.590000e-31 148.0
80 TraesCS4A01G450300 chr5D 89.720 107 9 2 5637 5742 423322107 423322212 1.230000e-27 135.0
81 TraesCS4A01G450300 chr1B 95.652 92 4 0 5651 5742 296490619 296490710 1.590000e-31 148.0
82 TraesCS4A01G450300 chr1A 86.957 92 4 3 13 98 510909735 510909824 5.830000e-16 97.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G450300 chr4A 715875076 715882133 7057 True 13034.000000 13034 100.000000 1 7058 1 chr4A.!!$R5 7057
1 TraesCS4A01G450300 chr4A 715711398 715717738 6340 False 1555.000000 3528 93.026600 717 6416 5 chr4A.!!$F5 5699
2 TraesCS4A01G450300 chr4A 715751907 715752541 634 False 797.000000 797 89.291000 6424 7058 1 chr4A.!!$F2 634
3 TraesCS4A01G450300 chr4A 690122169 690122921 752 True 654.000000 654 83.289000 1 717 1 chr4A.!!$R2 716
4 TraesCS4A01G450300 chr4A 715744794 715745389 595 False 638.000000 638 85.974000 6424 7027 1 chr4A.!!$F1 603
5 TraesCS4A01G450300 chr4A 715817717 715818266 549 True 630.000000 630 87.365000 6430 6982 1 chr4A.!!$R4 552
6 TraesCS4A01G450300 chr4A 715791515 715792058 543 False 597.000000 597 86.496000 6424 6970 1 chr4A.!!$F3 546
7 TraesCS4A01G450300 chr4A 715809467 715810019 552 True 553.000000 553 84.712000 6424 6979 1 chr4A.!!$R3 555
8 TraesCS4A01G450300 chr4A 626005627 626006356 729 False 370.000000 641 85.253500 13 717 2 chr4A.!!$F4 704
9 TraesCS4A01G450300 chr7A 17360340 17365901 5561 True 1959.250000 4643 93.128750 717 6416 4 chr7A.!!$R3 5699
10 TraesCS4A01G450300 chr7A 17337159 17337793 634 True 865.000000 865 91.223000 6422 7058 1 chr7A.!!$R1 636
11 TraesCS4A01G450300 chr7A 17347146 17347750 604 True 623.000000 623 85.246000 6424 7033 1 chr7A.!!$R2 609
12 TraesCS4A01G450300 chr7D 17865840 17871535 5695 True 1628.400000 3240 94.333800 717 6416 5 chr7D.!!$R5 5699
13 TraesCS4A01G450300 chr7D 17849540 17850174 634 True 791.000000 791 89.134000 6424 7058 1 chr7D.!!$R1 634
14 TraesCS4A01G450300 chr7D 17859507 17860136 629 True 669.000000 669 85.849000 6424 7058 1 chr7D.!!$R2 634
15 TraesCS4A01G450300 chr2B 629102887 629105400 2513 False 713.333333 907 84.618000 3129 6075 3 chr2B.!!$F4 2946
16 TraesCS4A01G450300 chr2B 245099176 245099802 626 False 704.000000 704 87.163000 96 717 1 chr2B.!!$F1 621
17 TraesCS4A01G450300 chr2B 629019412 629022803 3391 False 491.666667 662 79.126667 2381 5628 3 chr2B.!!$F3 3247
18 TraesCS4A01G450300 chr2D 529544665 529547238 2573 False 686.000000 845 83.223333 3128 6128 3 chr2D.!!$F5 3000
19 TraesCS4A01G450300 chr2D 529533263 529536820 3557 False 467.750000 638 80.900750 2381 6070 4 chr2D.!!$F4 3689
20 TraesCS4A01G450300 chr2A 674047092 674049627 2535 False 680.333333 843 83.845667 3129 6128 3 chr2A.!!$F2 2999
21 TraesCS4A01G450300 chr2A 674026489 674029642 3153 False 493.000000 662 79.952667 2502 5628 3 chr2A.!!$F1 3126
22 TraesCS4A01G450300 chr1D 6728772 6729536 764 True 435.500000 749 88.573500 1 717 2 chr1D.!!$R1 716
23 TraesCS4A01G450300 chr6A 494174874 494175609 735 False 676.000000 676 83.849000 1 717 1 chr6A.!!$F1 716
24 TraesCS4A01G450300 chr3B 129304503 129305259 756 False 649.000000 649 83.115000 1 720 1 chr3B.!!$F1 719
25 TraesCS4A01G450300 chr3D 544774767 544775512 745 True 643.000000 643 83.113000 2 720 1 chr3D.!!$R2 718
26 TraesCS4A01G450300 chr4D 35519130 35519766 636 True 372.500000 630 88.650000 1 583 2 chr4D.!!$R1 582
27 TraesCS4A01G450300 chr5B 85003567 85004082 515 False 468.000000 468 83.398000 212 717 1 chr5B.!!$F1 505

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
960 1071 1.004361 ATCCCTCACCCACCTACCC 59.996 63.158 0.00 0.0 0.00 3.69 F
1145 1256 0.166814 GACGGTGAGCATGCTTGAAC 59.833 55.000 23.61 19.3 0.00 3.18 F
1185 1296 0.594602 GTGTTAGGTTTTCCCACGCC 59.405 55.000 0.00 0.0 41.86 5.68 F
1386 2348 1.068083 CCGTGAGATCACCATCGGG 59.932 63.158 7.37 0.0 43.66 5.14 F
1478 2440 1.890510 GGTGTTCGCCAAACTCGGT 60.891 57.895 0.00 0.0 38.76 4.69 F
2421 4233 1.430992 TCCTTCGGAACTGGGAAACT 58.569 50.000 0.00 0.0 0.00 2.66 F
3489 5708 3.081061 TGAACACACTGTATGCCATTCC 58.919 45.455 0.00 0.0 0.00 3.01 F
4361 6779 0.324285 AGTGCCTTTCTGCTCCTGAG 59.676 55.000 0.00 0.0 0.00 3.35 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2000 2971 1.406477 GGTAAAGGCCCGGTCAAGTAG 60.406 57.143 0.00 0.0 0.00 2.57 R
2009 2980 2.122783 TGAAAGATGGTAAAGGCCCG 57.877 50.000 0.00 0.0 0.00 6.13 R
2153 3860 3.091545 TGCATTGATCCCAAAAGTCCTC 58.908 45.455 0.00 0.0 35.67 3.71 R
2421 4233 3.096092 ACAGTTCCTCAAGTTTTGCCAA 58.904 40.909 0.00 0.0 0.00 4.52 R
2560 4375 3.340814 AGGCCAGAACTGTCAATGTAG 57.659 47.619 5.01 0.0 0.00 2.74 R
4212 6487 0.250234 AATAAGTCAGCGCAGGAGCA 59.750 50.000 11.47 0.0 42.27 4.26 R
4692 7110 0.036732 TTCTGCACCCGAGCTCAAAT 59.963 50.000 15.40 0.0 34.99 2.32 R
6249 8758 2.147958 GGATGTGCCGTTACAGAAACA 58.852 47.619 0.00 0.0 38.03 2.83 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
65 72 8.910351 AGATATTTAGGAGAAGTATGCAAACC 57.090 34.615 0.00 0.00 0.00 3.27
189 247 7.255035 CCTGTTGCCATCTTCTCATATGTAAAG 60.255 40.741 1.90 7.86 0.00 1.85
191 249 5.065914 TGCCATCTTCTCATATGTAAAGGC 58.934 41.667 15.22 15.57 37.75 4.35
209 267 7.611467 TGTAAAGGCACACATATTTCTCTCATT 59.389 33.333 0.00 0.00 0.00 2.57
282 366 3.684305 GTCAAAACATGCTATTTTGGGGC 59.316 43.478 15.88 7.04 43.94 5.80
307 391 7.088905 CTTTCTCAAGATGGCATATTTATGGC 58.911 38.462 15.15 15.15 44.00 4.40
404 488 1.801242 TCTGGGGAGTTGACAAGTCA 58.199 50.000 21.63 0.00 37.91 3.41
634 723 2.797177 TGGCATGCTAATGTACCACA 57.203 45.000 18.92 0.00 36.08 4.17
636 725 3.630168 TGGCATGCTAATGTACCACAAT 58.370 40.909 18.92 0.00 36.08 2.71
643 732 7.706179 GCATGCTAATGTACCACAATATTGTTT 59.294 33.333 18.50 11.50 36.28 2.83
689 794 7.041721 GGAAAGAAAAATCACAACAAGTTCCT 58.958 34.615 0.00 0.00 0.00 3.36
790 895 3.569250 ATTACGTGGCCATTCAACAAC 57.431 42.857 9.72 0.00 0.00 3.32
799 904 3.119137 GGCCATTCAACAACTAATCCACC 60.119 47.826 0.00 0.00 0.00 4.61
843 948 3.448686 CGAGTTGCTTCTCCATCGTAAT 58.551 45.455 3.84 0.00 0.00 1.89
855 960 8.615878 TTCTCCATCGTAATCTTTTTCTTGAA 57.384 30.769 0.00 0.00 0.00 2.69
883 988 4.324402 CGTTCGCTGTACCTTAATTACGTT 59.676 41.667 0.00 0.00 0.00 3.99
889 996 5.149973 TGTACCTTAATTACGTTGCTGGA 57.850 39.130 0.00 0.00 0.00 3.86
894 1001 4.755123 CCTTAATTACGTTGCTGGATAGGG 59.245 45.833 0.00 0.00 0.00 3.53
902 1009 4.783227 ACGTTGCTGGATAGGGGATATATT 59.217 41.667 0.00 0.00 0.00 1.28
916 1023 3.576982 GGATATATTGGTCGACCTGGTCA 59.423 47.826 33.39 17.11 36.82 4.02
952 1063 1.703411 CTCTCTCTCATCCCTCACCC 58.297 60.000 0.00 0.00 0.00 4.61
960 1071 1.004361 ATCCCTCACCCACCTACCC 59.996 63.158 0.00 0.00 0.00 3.69
1065 1176 4.529219 CTACTCCATGGCGCGGCA 62.529 66.667 37.91 37.91 0.00 5.69
1145 1256 0.166814 GACGGTGAGCATGCTTGAAC 59.833 55.000 23.61 19.30 0.00 3.18
1153 1264 3.638160 TGAGCATGCTTGAACTTTTCCTT 59.362 39.130 23.61 0.00 0.00 3.36
1155 1266 3.638160 AGCATGCTTGAACTTTTCCTTCA 59.362 39.130 16.30 0.00 0.00 3.02
1185 1296 0.594602 GTGTTAGGTTTTCCCACGCC 59.405 55.000 0.00 0.00 41.86 5.68
1244 1355 5.030147 TCTCCTTGGAGCTTGGTAGATAAA 58.970 41.667 11.61 0.00 0.00 1.40
1245 1356 5.129485 TCTCCTTGGAGCTTGGTAGATAAAG 59.871 44.000 11.61 0.00 0.00 1.85
1293 1416 2.973899 GCAGTGAGCGAGAAGGGA 59.026 61.111 0.00 0.00 0.00 4.20
1348 2305 2.430465 GAGGGGTTTCTTTTCCCGTAC 58.570 52.381 0.00 0.00 45.13 3.67
1378 2339 2.121538 CCTCTCGGCCGTGAGATCA 61.122 63.158 43.31 19.42 43.69 2.92
1386 2348 1.068083 CCGTGAGATCACCATCGGG 59.932 63.158 7.37 0.00 43.66 5.14
1448 2410 3.345808 GTTTGTCTCGCAGCGGCA 61.346 61.111 16.42 9.19 41.24 5.69
1478 2440 1.890510 GGTGTTCGCCAAACTCGGT 60.891 57.895 0.00 0.00 38.76 4.69
1722 2685 3.239587 TCGTTACTTGGATCAATGCGA 57.760 42.857 0.00 0.00 0.00 5.10
1741 2704 3.675481 CGAGCGATTGGTAGATCGATAG 58.325 50.000 11.04 1.79 46.76 2.08
1917 2888 7.074653 AGTCTATTGTCCTAACTTGAAACCA 57.925 36.000 0.00 0.00 0.00 3.67
1927 2898 6.039270 TCCTAACTTGAAACCAACATTCTGTG 59.961 38.462 0.00 0.00 0.00 3.66
1937 2908 8.415950 AAACCAACATTCTGTGTATAATTCCA 57.584 30.769 0.00 0.00 41.14 3.53
2000 2971 4.039852 TGTTTCAGGGATTTAGGGCAAAAC 59.960 41.667 0.00 0.00 0.00 2.43
2053 3759 4.341235 CGGGGAGTTGACTGATATGAAGTA 59.659 45.833 0.00 0.00 0.00 2.24
2082 3788 7.020010 GTGAGATTCACAACTCAAATCATGAC 58.980 38.462 0.00 0.00 46.22 3.06
2153 3860 6.401394 TCACAGTTCCTCTCTTCAACATATG 58.599 40.000 0.00 0.00 0.00 1.78
2165 3872 5.945784 TCTTCAACATATGAGGACTTTTGGG 59.054 40.000 10.38 0.00 39.06 4.12
2396 4208 2.333926 GCGGAAACAATTTTAGTGGCC 58.666 47.619 0.00 0.00 0.00 5.36
2421 4233 1.430992 TCCTTCGGAACTGGGAAACT 58.569 50.000 0.00 0.00 0.00 2.66
2483 4296 6.613271 TCTGGGAACTCTATATTTCTTCTGCT 59.387 38.462 0.00 0.00 0.00 4.24
2515 4328 5.620206 TGTCTTCTTGCTTGGATTAGTCAA 58.380 37.500 0.00 0.00 0.00 3.18
2535 4350 5.891551 GTCAACCCCTTATCCAATGTGTATT 59.108 40.000 0.00 0.00 0.00 1.89
2560 4375 5.679734 TTTCTCTGTTTCTCAATGACAGC 57.320 39.130 0.00 0.00 40.36 4.40
2659 4476 3.124636 CCTATAGTTGCCGTGTTGTTGAC 59.875 47.826 0.00 0.00 0.00 3.18
2679 4496 7.772757 TGTTGACATATTATAATGCTCCACACA 59.227 33.333 8.28 1.16 0.00 3.72
2700 4520 9.764870 CACACAATTCAATCTTATGTACTTCTG 57.235 33.333 0.00 0.00 0.00 3.02
2773 4593 8.468756 ACCAGATTATATTGGTAGCTGGAGCG 62.469 46.154 11.66 0.00 45.58 5.03
2844 4678 6.639671 TGTAAAAATGAAAATACGGCATGC 57.360 33.333 9.90 9.90 0.00 4.06
2977 4828 7.890127 AGAAATTATGTGGAAGTGGAAGATTCA 59.110 33.333 0.00 0.00 0.00 2.57
2978 4829 8.599624 AAATTATGTGGAAGTGGAAGATTCAT 57.400 30.769 0.00 0.00 0.00 2.57
2979 4830 8.599624 AATTATGTGGAAGTGGAAGATTCATT 57.400 30.769 0.00 0.00 0.00 2.57
2980 4831 8.599624 ATTATGTGGAAGTGGAAGATTCATTT 57.400 30.769 0.00 0.00 0.00 2.32
2981 4832 6.923199 ATGTGGAAGTGGAAGATTCATTTT 57.077 33.333 0.00 0.00 0.00 1.82
2982 4833 9.527157 TTATGTGGAAGTGGAAGATTCATTTTA 57.473 29.630 0.00 0.00 0.00 1.52
2983 4834 7.831691 TGTGGAAGTGGAAGATTCATTTTAA 57.168 32.000 0.00 0.00 0.00 1.52
2984 4835 8.243961 TGTGGAAGTGGAAGATTCATTTTAAA 57.756 30.769 0.00 0.00 0.00 1.52
2985 4836 8.869109 TGTGGAAGTGGAAGATTCATTTTAAAT 58.131 29.630 0.00 0.00 0.00 1.40
2988 4839 9.521503 GGAAGTGGAAGATTCATTTTAAATAGC 57.478 33.333 0.00 0.00 0.00 2.97
2991 4842 9.860898 AGTGGAAGATTCATTTTAAATAGCAAC 57.139 29.630 0.00 0.00 0.00 4.17
2992 4843 9.638239 GTGGAAGATTCATTTTAAATAGCAACA 57.362 29.630 0.00 0.00 0.00 3.33
3235 5443 7.278461 TGACTAACTAGATCTATGGAACTGC 57.722 40.000 2.11 0.00 0.00 4.40
3475 5685 8.620116 TCAATAATCTGACATCTTTGAACACA 57.380 30.769 0.00 0.00 0.00 3.72
3489 5708 3.081061 TGAACACACTGTATGCCATTCC 58.919 45.455 0.00 0.00 0.00 3.01
3737 5997 4.982241 TGACATCTTCTCCTTCTGGTTT 57.018 40.909 0.00 0.00 34.23 3.27
3738 5998 6.213397 TGATGACATCTTCTCCTTCTGGTTTA 59.787 38.462 16.25 0.00 34.23 2.01
3847 6113 6.378564 CCTTCTTGTATGGACTCTCTTGACTA 59.621 42.308 0.00 0.00 0.00 2.59
4064 6336 6.903883 TTCTAATGGTGCTTTCGTTCTATC 57.096 37.500 0.00 0.00 0.00 2.08
4119 6393 3.695803 AAGCATTCCTTCATGGGCA 57.304 47.368 0.00 0.00 36.20 5.36
4212 6487 7.841222 AGAAAGGGCAGGTTTCATCTAAAATAT 59.159 33.333 8.39 0.00 36.53 1.28
4220 6495 6.264067 AGGTTTCATCTAAAATATGCTCCTGC 59.736 38.462 0.00 0.00 40.20 4.85
4302 6594 6.605194 TGAAAGGCTGTTTTGGTGCATATATA 59.395 34.615 0.00 0.00 0.00 0.86
4338 6756 8.051901 ATAAATAAATTTAGATGCCTACGGCC 57.948 34.615 3.94 0.00 40.56 6.13
4339 6757 7.148306 ATAAATAAATTTAGATGCCTACGGCCG 60.148 37.037 26.86 26.86 40.56 6.13
4346 6764 3.497031 GCCTACGGCCGAAAGTGC 61.497 66.667 35.90 25.49 44.06 4.40
4347 6765 2.818274 CCTACGGCCGAAAGTGCC 60.818 66.667 35.90 0.00 41.96 5.01
4348 6766 2.264794 CTACGGCCGAAAGTGCCT 59.735 61.111 35.90 9.38 42.82 4.75
4349 6767 1.375523 CTACGGCCGAAAGTGCCTT 60.376 57.895 35.90 8.50 42.82 4.35
4350 6768 0.953960 CTACGGCCGAAAGTGCCTTT 60.954 55.000 35.90 7.61 42.82 3.11
4351 6769 0.952010 TACGGCCGAAAGTGCCTTTC 60.952 55.000 35.90 14.28 44.29 2.62
4352 6770 1.966451 CGGCCGAAAGTGCCTTTCT 60.966 57.895 24.07 0.00 45.19 2.52
4353 6771 1.581447 GGCCGAAAGTGCCTTTCTG 59.419 57.895 19.11 15.50 45.19 3.02
4354 6772 1.081175 GCCGAAAGTGCCTTTCTGC 60.081 57.895 19.85 19.85 46.80 4.26
4355 6773 2.633860 CCGAAAGTGCCTTTCTGCT 58.366 52.632 19.11 0.00 45.19 4.24
4356 6774 0.519077 CCGAAAGTGCCTTTCTGCTC 59.481 55.000 19.11 0.00 45.19 4.26
4357 6775 0.519077 CGAAAGTGCCTTTCTGCTCC 59.481 55.000 19.11 1.19 45.19 4.70
4358 6776 1.879796 CGAAAGTGCCTTTCTGCTCCT 60.880 52.381 19.11 0.00 45.19 3.69
4359 6777 1.538950 GAAAGTGCCTTTCTGCTCCTG 59.461 52.381 16.08 0.00 44.33 3.86
4360 6778 0.767375 AAGTGCCTTTCTGCTCCTGA 59.233 50.000 0.00 0.00 0.00 3.86
4361 6779 0.324285 AGTGCCTTTCTGCTCCTGAG 59.676 55.000 0.00 0.00 0.00 3.35
4382 6800 2.416747 CTCATTTGAGCTCGGTGAACA 58.583 47.619 9.64 0.00 35.13 3.18
4383 6801 2.414481 CTCATTTGAGCTCGGTGAACAG 59.586 50.000 9.64 0.00 35.13 3.16
4384 6802 2.146342 CATTTGAGCTCGGTGAACAGT 58.854 47.619 9.64 0.00 0.00 3.55
4385 6803 3.006430 TCATTTGAGCTCGGTGAACAGTA 59.994 43.478 9.64 0.00 0.00 2.74
4386 6804 3.462483 TTTGAGCTCGGTGAACAGTAA 57.538 42.857 9.64 0.00 0.00 2.24
4387 6805 3.462483 TTGAGCTCGGTGAACAGTAAA 57.538 42.857 9.64 0.00 0.00 2.01
4388 6806 3.462483 TGAGCTCGGTGAACAGTAAAA 57.538 42.857 9.64 0.00 0.00 1.52
4389 6807 4.002906 TGAGCTCGGTGAACAGTAAAAT 57.997 40.909 9.64 0.00 0.00 1.82
4390 6808 5.142061 TGAGCTCGGTGAACAGTAAAATA 57.858 39.130 9.64 0.00 0.00 1.40
4391 6809 5.543714 TGAGCTCGGTGAACAGTAAAATAA 58.456 37.500 9.64 0.00 0.00 1.40
4392 6810 5.992829 TGAGCTCGGTGAACAGTAAAATAAA 59.007 36.000 9.64 0.00 0.00 1.40
4393 6811 6.483974 TGAGCTCGGTGAACAGTAAAATAAAA 59.516 34.615 9.64 0.00 0.00 1.52
4394 6812 7.012515 TGAGCTCGGTGAACAGTAAAATAAAAA 59.987 33.333 9.64 0.00 0.00 1.94
4443 6861 7.608308 TTTTTGGGAGAAACATTGACAAAAG 57.392 32.000 0.00 0.00 37.55 2.27
4444 6862 5.930837 TTGGGAGAAACATTGACAAAAGT 57.069 34.783 0.00 0.00 0.00 2.66
4445 6863 5.930837 TGGGAGAAACATTGACAAAAGTT 57.069 34.783 0.00 0.00 0.00 2.66
4446 6864 5.901552 TGGGAGAAACATTGACAAAAGTTC 58.098 37.500 9.09 5.33 0.00 3.01
4447 6865 5.656416 TGGGAGAAACATTGACAAAAGTTCT 59.344 36.000 9.09 9.17 0.00 3.01
4448 6866 6.831353 TGGGAGAAACATTGACAAAAGTTCTA 59.169 34.615 9.09 0.00 0.00 2.10
4449 6867 7.340743 TGGGAGAAACATTGACAAAAGTTCTAA 59.659 33.333 9.09 0.00 0.00 2.10
4450 6868 7.862873 GGGAGAAACATTGACAAAAGTTCTAAG 59.137 37.037 9.09 0.00 0.00 2.18
4451 6869 8.406297 GGAGAAACATTGACAAAAGTTCTAAGT 58.594 33.333 9.09 0.00 0.00 2.24
4452 6870 9.226345 GAGAAACATTGACAAAAGTTCTAAGTG 57.774 33.333 9.09 0.00 0.00 3.16
4453 6871 7.702348 AGAAACATTGACAAAAGTTCTAAGTGC 59.298 33.333 9.09 0.00 0.00 4.40
4454 6872 6.699575 ACATTGACAAAAGTTCTAAGTGCT 57.300 33.333 0.00 0.00 0.00 4.40
4455 6873 7.100458 ACATTGACAAAAGTTCTAAGTGCTT 57.900 32.000 0.00 0.00 0.00 3.91
4456 6874 6.974622 ACATTGACAAAAGTTCTAAGTGCTTG 59.025 34.615 0.00 0.00 0.00 4.01
4457 6875 4.920376 TGACAAAAGTTCTAAGTGCTTGC 58.080 39.130 0.00 0.00 0.00 4.01
4458 6876 4.397730 TGACAAAAGTTCTAAGTGCTTGCA 59.602 37.500 0.00 0.00 0.00 4.08
4459 6877 5.105957 TGACAAAAGTTCTAAGTGCTTGCAA 60.106 36.000 0.00 0.00 0.00 4.08
4460 6878 5.719173 ACAAAAGTTCTAAGTGCTTGCAAA 58.281 33.333 0.00 0.00 0.00 3.68
4461 6879 6.162777 ACAAAAGTTCTAAGTGCTTGCAAAA 58.837 32.000 0.00 0.00 0.00 2.44
4462 6880 6.648725 ACAAAAGTTCTAAGTGCTTGCAAAAA 59.351 30.769 0.00 0.00 0.00 1.94
4463 6881 7.334171 ACAAAAGTTCTAAGTGCTTGCAAAAAT 59.666 29.630 0.00 0.00 0.00 1.82
4464 6882 7.848223 AAAGTTCTAAGTGCTTGCAAAAATT 57.152 28.000 0.00 0.00 0.00 1.82
4465 6883 7.468922 AAGTTCTAAGTGCTTGCAAAAATTC 57.531 32.000 0.00 0.00 0.00 2.17
4466 6884 6.572519 AGTTCTAAGTGCTTGCAAAAATTCA 58.427 32.000 0.00 0.00 0.00 2.57
4467 6885 7.212274 AGTTCTAAGTGCTTGCAAAAATTCAT 58.788 30.769 0.00 0.00 0.00 2.57
4468 6886 7.383300 AGTTCTAAGTGCTTGCAAAAATTCATC 59.617 33.333 0.00 0.00 0.00 2.92
4469 6887 6.747125 TCTAAGTGCTTGCAAAAATTCATCA 58.253 32.000 0.00 0.00 0.00 3.07
4470 6888 7.380536 TCTAAGTGCTTGCAAAAATTCATCAT 58.619 30.769 0.00 0.00 0.00 2.45
4471 6889 5.856126 AGTGCTTGCAAAAATTCATCATG 57.144 34.783 0.00 0.00 0.00 3.07
4472 6890 5.543714 AGTGCTTGCAAAAATTCATCATGA 58.456 33.333 0.00 0.00 0.00 3.07
4473 6891 5.992829 AGTGCTTGCAAAAATTCATCATGAA 59.007 32.000 1.59 1.59 41.09 2.57
4474 6892 6.483974 AGTGCTTGCAAAAATTCATCATGAAA 59.516 30.769 3.63 0.00 40.12 2.69
4475 6893 7.174253 AGTGCTTGCAAAAATTCATCATGAAAT 59.826 29.630 3.63 0.00 40.12 2.17
4476 6894 7.480542 GTGCTTGCAAAAATTCATCATGAAATC 59.519 33.333 3.63 0.00 40.12 2.17
4477 6895 7.173390 TGCTTGCAAAAATTCATCATGAAATCA 59.827 29.630 3.63 0.00 40.12 2.57
4478 6896 7.480542 GCTTGCAAAAATTCATCATGAAATCAC 59.519 33.333 3.63 0.00 40.12 3.06
4479 6897 7.964604 TGCAAAAATTCATCATGAAATCACA 57.035 28.000 3.63 0.00 40.12 3.58
4480 6898 8.554835 TGCAAAAATTCATCATGAAATCACAT 57.445 26.923 3.63 0.00 40.12 3.21
4481 6899 9.004717 TGCAAAAATTCATCATGAAATCACATT 57.995 25.926 3.63 0.00 40.12 2.71
4482 6900 9.485591 GCAAAAATTCATCATGAAATCACATTC 57.514 29.630 3.63 0.00 40.12 2.67
4483 6901 9.982291 CAAAAATTCATCATGAAATCACATTCC 57.018 29.630 3.63 0.00 40.12 3.01
4484 6902 9.953565 AAAAATTCATCATGAAATCACATTCCT 57.046 25.926 3.63 0.00 40.12 3.36
4490 6908 9.511272 TCATCATGAAATCACATTCCTATAAGG 57.489 33.333 0.00 0.00 36.46 2.69
4491 6909 7.750229 TCATGAAATCACATTCCTATAAGGC 57.250 36.000 0.00 0.00 34.61 4.35
4492 6910 6.427853 TCATGAAATCACATTCCTATAAGGCG 59.572 38.462 0.00 0.00 34.61 5.52
4493 6911 5.680619 TGAAATCACATTCCTATAAGGCGT 58.319 37.500 0.00 0.00 34.61 5.68
4494 6912 5.527214 TGAAATCACATTCCTATAAGGCGTG 59.473 40.000 0.00 0.00 34.61 5.34
4495 6913 3.469008 TCACATTCCTATAAGGCGTGG 57.531 47.619 8.95 0.00 34.61 4.94
4496 6914 1.873591 CACATTCCTATAAGGCGTGGC 59.126 52.381 0.00 0.00 34.61 5.01
4497 6915 1.488812 ACATTCCTATAAGGCGTGGCA 59.511 47.619 0.00 0.00 34.61 4.92
4498 6916 2.092646 ACATTCCTATAAGGCGTGGCAA 60.093 45.455 0.00 0.00 34.61 4.52
4499 6917 2.791347 TTCCTATAAGGCGTGGCAAA 57.209 45.000 0.00 0.00 34.61 3.68
4500 6918 2.791347 TCCTATAAGGCGTGGCAAAA 57.209 45.000 0.00 0.00 34.61 2.44
4501 6919 3.074675 TCCTATAAGGCGTGGCAAAAA 57.925 42.857 0.00 0.00 34.61 1.94
4524 6942 7.628769 AAAAACAAATTCAGTGCTCCAAAAT 57.371 28.000 0.00 0.00 0.00 1.82
4525 6943 6.607735 AAACAAATTCAGTGCTCCAAAATG 57.392 33.333 0.00 0.00 0.00 2.32
4526 6944 4.060205 ACAAATTCAGTGCTCCAAAATGC 58.940 39.130 0.00 0.00 0.00 3.56
4527 6945 4.202284 ACAAATTCAGTGCTCCAAAATGCT 60.202 37.500 0.00 0.00 0.00 3.79
4528 6946 4.612264 AATTCAGTGCTCCAAAATGCTT 57.388 36.364 0.00 0.00 0.00 3.91
4529 6947 4.612264 ATTCAGTGCTCCAAAATGCTTT 57.388 36.364 0.00 0.00 0.00 3.51
4530 6948 4.405116 TTCAGTGCTCCAAAATGCTTTT 57.595 36.364 0.00 0.00 0.00 2.27
4547 6965 6.389830 TGCTTTTGAAAGTAGCATTTCAGA 57.610 33.333 0.45 5.43 46.70 3.27
4548 6966 6.441274 TGCTTTTGAAAGTAGCATTTCAGAG 58.559 36.000 0.45 12.37 46.70 3.35
4549 6967 6.039717 TGCTTTTGAAAGTAGCATTTCAGAGT 59.960 34.615 0.45 0.00 46.70 3.24
4550 6968 7.228507 TGCTTTTGAAAGTAGCATTTCAGAGTA 59.771 33.333 0.45 9.68 46.70 2.59
4551 6969 7.535599 GCTTTTGAAAGTAGCATTTCAGAGTAC 59.464 37.037 10.41 0.00 46.70 2.73
4552 6970 7.435068 TTTGAAAGTAGCATTTCAGAGTACC 57.565 36.000 10.41 0.00 46.70 3.34
4553 6971 5.168569 TGAAAGTAGCATTTCAGAGTACCG 58.831 41.667 7.44 0.00 42.68 4.02
4554 6972 3.802948 AGTAGCATTTCAGAGTACCGG 57.197 47.619 0.00 0.00 0.00 5.28
4555 6973 3.097614 AGTAGCATTTCAGAGTACCGGT 58.902 45.455 13.98 13.98 0.00 5.28
4556 6974 3.514309 AGTAGCATTTCAGAGTACCGGTT 59.486 43.478 15.04 0.00 0.00 4.44
4557 6975 3.418684 AGCATTTCAGAGTACCGGTTT 57.581 42.857 15.04 0.32 0.00 3.27
4558 6976 3.751518 AGCATTTCAGAGTACCGGTTTT 58.248 40.909 15.04 0.00 0.00 2.43
4559 6977 3.502211 AGCATTTCAGAGTACCGGTTTTG 59.498 43.478 15.04 6.70 0.00 2.44
4560 6978 3.252458 GCATTTCAGAGTACCGGTTTTGT 59.748 43.478 15.04 0.00 0.00 2.83
4561 6979 4.261447 GCATTTCAGAGTACCGGTTTTGTT 60.261 41.667 15.04 0.00 0.00 2.83
4562 6980 5.735070 GCATTTCAGAGTACCGGTTTTGTTT 60.735 40.000 15.04 0.00 0.00 2.83
4563 6981 5.900865 TTTCAGAGTACCGGTTTTGTTTT 57.099 34.783 15.04 0.00 0.00 2.43
4564 6982 5.900865 TTCAGAGTACCGGTTTTGTTTTT 57.099 34.783 15.04 0.00 0.00 1.94
4586 7004 7.979444 TTTTCTACCACACCTTCTAGAAATG 57.021 36.000 6.63 10.28 35.91 2.32
4587 7005 6.681729 TTCTACCACACCTTCTAGAAATGT 57.318 37.500 13.76 13.76 0.00 2.71
4588 7006 6.037786 TCTACCACACCTTCTAGAAATGTG 57.962 41.667 27.67 27.67 37.29 3.21
4589 7007 4.974645 ACCACACCTTCTAGAAATGTGA 57.025 40.909 32.18 5.48 38.64 3.58
4590 7008 5.505181 ACCACACCTTCTAGAAATGTGAT 57.495 39.130 32.18 22.53 38.64 3.06
4591 7009 5.880901 ACCACACCTTCTAGAAATGTGATT 58.119 37.500 32.18 22.45 38.64 2.57
4592 7010 6.306987 ACCACACCTTCTAGAAATGTGATTT 58.693 36.000 32.18 20.85 38.64 2.17
4593 7011 6.431234 ACCACACCTTCTAGAAATGTGATTTC 59.569 38.462 32.18 0.00 46.90 2.17
4604 7022 6.911484 GAAATGTGATTTCGTGACGAATTT 57.089 33.333 21.78 16.55 45.28 1.82
4605 7023 7.320499 GAAATGTGATTTCGTGACGAATTTT 57.680 32.000 21.78 13.26 45.28 1.82
4606 7024 7.692908 AAATGTGATTTCGTGACGAATTTTT 57.307 28.000 21.78 11.64 45.28 1.94
4607 7025 6.674005 ATGTGATTTCGTGACGAATTTTTG 57.326 33.333 21.78 0.00 45.28 2.44
4608 7026 4.439449 TGTGATTTCGTGACGAATTTTTGC 59.561 37.500 21.78 10.20 45.28 3.68
4609 7027 4.439449 GTGATTTCGTGACGAATTTTTGCA 59.561 37.500 21.78 9.08 45.28 4.08
4610 7028 5.037385 TGATTTCGTGACGAATTTTTGCAA 58.963 33.333 21.78 4.01 45.28 4.08
4611 7029 5.172951 TGATTTCGTGACGAATTTTTGCAAG 59.827 36.000 21.78 0.00 45.28 4.01
4612 7030 2.380660 TCGTGACGAATTTTTGCAAGC 58.619 42.857 4.69 0.00 31.06 4.01
4613 7031 2.115595 CGTGACGAATTTTTGCAAGCA 58.884 42.857 0.00 0.00 0.00 3.91
4614 7032 2.151736 CGTGACGAATTTTTGCAAGCAG 59.848 45.455 0.00 0.00 0.00 4.24
4615 7033 3.115554 GTGACGAATTTTTGCAAGCAGT 58.884 40.909 0.00 0.00 0.00 4.40
4616 7034 3.551485 GTGACGAATTTTTGCAAGCAGTT 59.449 39.130 0.00 0.00 0.00 3.16
4617 7035 4.737765 GTGACGAATTTTTGCAAGCAGTTA 59.262 37.500 0.00 0.00 0.00 2.24
4618 7036 5.231147 GTGACGAATTTTTGCAAGCAGTTAA 59.769 36.000 0.00 0.00 0.00 2.01
4619 7037 5.807520 TGACGAATTTTTGCAAGCAGTTAAA 59.192 32.000 0.00 0.00 0.00 1.52
4620 7038 6.311445 TGACGAATTTTTGCAAGCAGTTAAAA 59.689 30.769 0.00 5.82 0.00 1.52
4621 7039 6.474364 ACGAATTTTTGCAAGCAGTTAAAAC 58.526 32.000 0.00 0.00 0.00 2.43
4622 7040 6.312672 ACGAATTTTTGCAAGCAGTTAAAACT 59.687 30.769 0.00 0.00 40.60 2.66
4623 7041 7.148490 ACGAATTTTTGCAAGCAGTTAAAACTT 60.148 29.630 0.00 0.47 37.08 2.66
4624 7042 7.691877 CGAATTTTTGCAAGCAGTTAAAACTTT 59.308 29.630 0.00 0.00 37.08 2.66
4625 7043 9.340695 GAATTTTTGCAAGCAGTTAAAACTTTT 57.659 25.926 0.00 0.00 37.08 2.27
4626 7044 8.672214 ATTTTTGCAAGCAGTTAAAACTTTTG 57.328 26.923 0.00 10.40 37.08 2.44
4627 7045 6.793492 TTTGCAAGCAGTTAAAACTTTTGT 57.207 29.167 0.00 0.00 37.08 2.83
4628 7046 6.401955 TTGCAAGCAGTTAAAACTTTTGTC 57.598 33.333 0.00 9.39 37.08 3.18
4629 7047 5.473931 TGCAAGCAGTTAAAACTTTTGTCA 58.526 33.333 13.90 10.94 37.08 3.58
4630 7048 5.928839 TGCAAGCAGTTAAAACTTTTGTCAA 59.071 32.000 13.90 0.00 37.08 3.18
4631 7049 6.593382 TGCAAGCAGTTAAAACTTTTGTCAAT 59.407 30.769 13.90 0.00 37.08 2.57
4632 7050 6.901357 GCAAGCAGTTAAAACTTTTGTCAATG 59.099 34.615 13.90 0.00 37.08 2.82
4633 7051 7.412891 GCAAGCAGTTAAAACTTTTGTCAATGT 60.413 33.333 13.90 0.00 37.08 2.71
4634 7052 8.442384 CAAGCAGTTAAAACTTTTGTCAATGTT 58.558 29.630 0.00 0.00 37.08 2.71
4635 7053 8.546597 AGCAGTTAAAACTTTTGTCAATGTTT 57.453 26.923 9.87 9.87 40.32 2.83
4636 7054 8.655970 AGCAGTTAAAACTTTTGTCAATGTTTC 58.344 29.630 13.86 6.05 38.61 2.78
4637 7055 8.655970 GCAGTTAAAACTTTTGTCAATGTTTCT 58.344 29.630 13.86 7.55 38.61 2.52
4639 7057 9.366216 AGTTAAAACTTTTGTCAATGTTTCTCC 57.634 29.630 13.86 7.73 38.61 3.71
4640 7058 8.600625 GTTAAAACTTTTGTCAATGTTTCTCCC 58.399 33.333 13.86 4.29 38.61 4.30
4641 7059 4.937201 ACTTTTGTCAATGTTTCTCCCC 57.063 40.909 0.00 0.00 0.00 4.81
4642 7060 4.285863 ACTTTTGTCAATGTTTCTCCCCA 58.714 39.130 0.00 0.00 0.00 4.96
4643 7061 4.714308 ACTTTTGTCAATGTTTCTCCCCAA 59.286 37.500 0.00 0.00 0.00 4.12
4644 7062 5.188751 ACTTTTGTCAATGTTTCTCCCCAAA 59.811 36.000 0.00 0.00 0.00 3.28
4645 7063 5.885449 TTTGTCAATGTTTCTCCCCAAAT 57.115 34.783 0.00 0.00 0.00 2.32
4646 7064 5.885449 TTGTCAATGTTTCTCCCCAAATT 57.115 34.783 0.00 0.00 0.00 1.82
4647 7065 5.885449 TGTCAATGTTTCTCCCCAAATTT 57.115 34.783 0.00 0.00 0.00 1.82
4648 7066 5.609423 TGTCAATGTTTCTCCCCAAATTTG 58.391 37.500 11.40 11.40 0.00 2.32
4685 7103 9.758651 ATTTAGTTTTGATTTTACTGTTCACCC 57.241 29.630 0.00 0.00 0.00 4.61
4686 7104 5.827666 AGTTTTGATTTTACTGTTCACCCG 58.172 37.500 0.00 0.00 0.00 5.28
4687 7105 5.591067 AGTTTTGATTTTACTGTTCACCCGA 59.409 36.000 0.00 0.00 0.00 5.14
4688 7106 5.682943 TTTGATTTTACTGTTCACCCGAG 57.317 39.130 0.00 0.00 0.00 4.63
4689 7107 3.071479 TGATTTTACTGTTCACCCGAGC 58.929 45.455 0.00 0.00 0.00 5.03
4690 7108 2.922740 TTTTACTGTTCACCCGAGCT 57.077 45.000 0.00 0.00 0.00 4.09
4691 7109 2.450609 TTTACTGTTCACCCGAGCTC 57.549 50.000 2.73 2.73 0.00 4.09
4692 7110 1.334160 TTACTGTTCACCCGAGCTCA 58.666 50.000 15.40 0.00 0.00 4.26
4693 7111 1.557099 TACTGTTCACCCGAGCTCAT 58.443 50.000 15.40 0.00 0.00 2.90
4694 7112 0.687354 ACTGTTCACCCGAGCTCATT 59.313 50.000 15.40 0.00 0.00 2.57
4695 7113 1.072331 ACTGTTCACCCGAGCTCATTT 59.928 47.619 15.40 0.00 0.00 2.32
4696 7114 1.466167 CTGTTCACCCGAGCTCATTTG 59.534 52.381 15.40 6.81 0.00 2.32
4697 7115 1.071542 TGTTCACCCGAGCTCATTTGA 59.928 47.619 15.40 9.18 0.00 2.69
4698 7116 1.734465 GTTCACCCGAGCTCATTTGAG 59.266 52.381 15.40 3.13 44.75 3.02
4707 7125 2.093216 CTCATTTGAGCTCGGGTGC 58.907 57.895 9.64 0.00 35.13 5.01
4708 7126 0.674581 CTCATTTGAGCTCGGGTGCA 60.675 55.000 9.64 0.00 35.13 4.57
4709 7127 0.674581 TCATTTGAGCTCGGGTGCAG 60.675 55.000 9.64 0.00 34.99 4.41
4710 7128 0.674581 CATTTGAGCTCGGGTGCAGA 60.675 55.000 9.64 0.00 34.99 4.26
4711 7129 0.036732 ATTTGAGCTCGGGTGCAGAA 59.963 50.000 9.64 0.00 34.99 3.02
4712 7130 0.179032 TTTGAGCTCGGGTGCAGAAA 60.179 50.000 9.64 0.00 34.99 2.52
4713 7131 0.884704 TTGAGCTCGGGTGCAGAAAC 60.885 55.000 9.64 0.00 34.99 2.78
4714 7132 1.004440 GAGCTCGGGTGCAGAAACT 60.004 57.895 0.00 0.00 34.99 2.66
4715 7133 1.004440 AGCTCGGGTGCAGAAACTC 60.004 57.895 0.00 0.00 34.99 3.01
4716 7134 2.035442 GCTCGGGTGCAGAAACTCC 61.035 63.158 0.00 0.00 0.00 3.85
4717 7135 1.371183 CTCGGGTGCAGAAACTCCA 59.629 57.895 0.00 0.00 0.00 3.86
4718 7136 0.951040 CTCGGGTGCAGAAACTCCAC 60.951 60.000 0.00 0.00 0.00 4.02
4719 7137 2.317609 CGGGTGCAGAAACTCCACG 61.318 63.158 0.00 0.00 0.00 4.94
4720 7138 1.227853 GGGTGCAGAAACTCCACGT 60.228 57.895 0.00 0.00 0.00 4.49
4721 7139 1.228657 GGGTGCAGAAACTCCACGTC 61.229 60.000 0.00 0.00 0.00 4.34
4744 7162 3.129109 GCCTACGGCTCCTATTGTTTAC 58.871 50.000 0.00 0.00 46.69 2.01
4769 7196 6.238786 CCGAGTGACATATTAGTCTTACAGCT 60.239 42.308 0.00 0.00 39.27 4.24
5034 7515 9.757227 TCTTATTTTGGGTTTAAAATGTCACTG 57.243 29.630 6.70 0.00 39.74 3.66
5108 7589 5.362556 ACACCATGTTTTCTTGATTCTCG 57.637 39.130 0.00 0.00 0.00 4.04
5112 7593 7.086376 CACCATGTTTTCTTGATTCTCGAAAT 58.914 34.615 0.00 0.00 0.00 2.17
5460 7947 4.574674 ACTGTTCCAGAATGCAAGGATA 57.425 40.909 0.00 0.00 35.18 2.59
5645 8137 8.161425 AGTGACAAATTAAACAGTACCCATAGT 58.839 33.333 0.00 0.00 0.00 2.12
5655 8147 7.415592 AACAGTACCCATAGTTAGTTACTCC 57.584 40.000 0.00 0.00 38.33 3.85
5656 8148 5.896106 ACAGTACCCATAGTTAGTTACTCCC 59.104 44.000 0.00 0.00 38.33 4.30
5657 8149 6.134754 CAGTACCCATAGTTAGTTACTCCCT 58.865 44.000 0.00 0.00 38.33 4.20
5658 8150 6.264970 CAGTACCCATAGTTAGTTACTCCCTC 59.735 46.154 0.00 0.00 38.33 4.30
5659 8151 4.554683 ACCCATAGTTAGTTACTCCCTCC 58.445 47.826 0.00 0.00 38.33 4.30
5660 8152 3.573110 CCCATAGTTAGTTACTCCCTCCG 59.427 52.174 0.00 0.00 38.33 4.63
5661 8153 4.213513 CCATAGTTAGTTACTCCCTCCGT 58.786 47.826 0.00 0.00 38.33 4.69
5662 8154 5.380043 CCATAGTTAGTTACTCCCTCCGTA 58.620 45.833 0.00 0.00 38.33 4.02
5663 8155 5.829924 CCATAGTTAGTTACTCCCTCCGTAA 59.170 44.000 0.00 0.00 38.33 3.18
5664 8156 6.322201 CCATAGTTAGTTACTCCCTCCGTAAA 59.678 42.308 0.00 0.00 38.33 2.01
5665 8157 5.651387 AGTTAGTTACTCCCTCCGTAAAC 57.349 43.478 0.00 0.00 28.23 2.01
5666 8158 5.328565 AGTTAGTTACTCCCTCCGTAAACT 58.671 41.667 0.00 0.00 28.23 2.66
5667 8159 6.485171 AGTTAGTTACTCCCTCCGTAAACTA 58.515 40.000 0.00 0.00 28.23 2.24
5668 8160 6.948309 AGTTAGTTACTCCCTCCGTAAACTAA 59.052 38.462 0.00 0.00 28.23 2.24
5669 8161 7.617329 AGTTAGTTACTCCCTCCGTAAACTAAT 59.383 37.037 8.27 0.00 31.43 1.73
5670 8162 8.903820 GTTAGTTACTCCCTCCGTAAACTAATA 58.096 37.037 8.27 0.00 31.43 0.98
5671 8163 9.646522 TTAGTTACTCCCTCCGTAAACTAATAT 57.353 33.333 0.00 0.00 0.00 1.28
5673 8165 9.646522 AGTTACTCCCTCCGTAAACTAATATAA 57.353 33.333 0.00 0.00 0.00 0.98
5677 8169 7.930325 ACTCCCTCCGTAAACTAATATAAAAGC 59.070 37.037 0.00 0.00 0.00 3.51
5678 8170 7.794041 TCCCTCCGTAAACTAATATAAAAGCA 58.206 34.615 0.00 0.00 0.00 3.91
5679 8171 8.434392 TCCCTCCGTAAACTAATATAAAAGCAT 58.566 33.333 0.00 0.00 0.00 3.79
5680 8172 9.063615 CCCTCCGTAAACTAATATAAAAGCATT 57.936 33.333 0.00 0.00 0.00 3.56
5711 8203 7.393841 ACTAAAGTAGTGATCTAAACGCTCT 57.606 36.000 0.00 0.00 37.69 4.09
5712 8204 7.828712 ACTAAAGTAGTGATCTAAACGCTCTT 58.171 34.615 0.00 0.00 37.69 2.85
5713 8205 8.954350 ACTAAAGTAGTGATCTAAACGCTCTTA 58.046 33.333 0.00 0.00 37.69 2.10
5714 8206 9.953697 CTAAAGTAGTGATCTAAACGCTCTTAT 57.046 33.333 0.00 0.00 0.00 1.73
5729 8221 9.490379 AAACGCTCTTATATTAGTTTATGGAGG 57.510 33.333 0.00 0.00 31.14 4.30
5730 8222 7.612677 ACGCTCTTATATTAGTTTATGGAGGG 58.387 38.462 0.00 0.00 35.06 4.30
5731 8223 7.453752 ACGCTCTTATATTAGTTTATGGAGGGA 59.546 37.037 0.00 0.00 34.22 4.20
5732 8224 7.976734 CGCTCTTATATTAGTTTATGGAGGGAG 59.023 40.741 0.00 0.00 33.23 4.30
5884 8382 5.301045 TCCTGTCACGAAGAACTTTCTAGAA 59.699 40.000 0.00 0.00 36.28 2.10
6041 8540 7.604164 ACCATATATTCTCCAGATTAACTTGCG 59.396 37.037 0.00 0.00 0.00 4.85
6163 8667 8.766994 ATGTGGTGATGGTTATTTATTTAGCT 57.233 30.769 0.00 0.00 0.00 3.32
6239 8748 6.805713 TGTAGATGTCATCAAGATTCGCTAA 58.194 36.000 15.20 0.00 0.00 3.09
6245 8754 7.376435 TGTCATCAAGATTCGCTAAAATTCA 57.624 32.000 0.00 0.00 0.00 2.57
6249 8758 9.859427 TCATCAAGATTCGCTAAAATTCAAAAT 57.141 25.926 0.00 0.00 0.00 1.82
6250 8759 9.895894 CATCAAGATTCGCTAAAATTCAAAATG 57.104 29.630 0.00 0.00 0.00 2.32
6256 8778 9.731519 GATTCGCTAAAATTCAAAATGTTTCTG 57.268 29.630 0.00 0.00 0.00 3.02
6353 8875 4.859629 GTTGATATGTTCCGTCAACTCC 57.140 45.455 9.50 0.00 45.02 3.85
6416 8938 5.944135 ACCAGGCTAAACAAAGGTAGTTAA 58.056 37.500 0.00 0.00 0.00 2.01
6417 8939 6.367161 ACCAGGCTAAACAAAGGTAGTTAAA 58.633 36.000 0.00 0.00 0.00 1.52
6418 8940 7.008332 ACCAGGCTAAACAAAGGTAGTTAAAT 58.992 34.615 0.00 0.00 0.00 1.40
6419 8941 8.165397 ACCAGGCTAAACAAAGGTAGTTAAATA 58.835 33.333 0.00 0.00 0.00 1.40
6420 8942 9.185680 CCAGGCTAAACAAAGGTAGTTAAATAT 57.814 33.333 0.00 0.00 0.00 1.28
6521 9043 0.474184 AACCAGCAGTAGCACCTTGT 59.526 50.000 0.00 0.00 45.49 3.16
6538 9060 3.937706 CCTTGTGCTTTTCATCGAGATCT 59.062 43.478 0.00 0.00 0.00 2.75
6546 9071 5.121454 GCTTTTCATCGAGATCTTTCACTGT 59.879 40.000 0.00 0.00 0.00 3.55
6654 9179 6.458751 GCGATGATGTTGAAGGATGTGTTTAT 60.459 38.462 0.00 0.00 0.00 1.40
6655 9180 7.475015 CGATGATGTTGAAGGATGTGTTTATT 58.525 34.615 0.00 0.00 0.00 1.40
6691 9216 4.396854 CCGTAGGCAGTAACGAGC 57.603 61.111 0.00 0.00 46.14 5.03
6692 9217 1.807886 CCGTAGGCAGTAACGAGCT 59.192 57.895 0.00 0.00 46.14 4.09
6796 9321 0.602638 ATGTGACGAAAGCTGCCGAA 60.603 50.000 13.91 0.73 0.00 4.30
6871 9396 1.148310 GACCGATTGTATGCCCATCG 58.852 55.000 5.75 5.75 34.86 3.84
6926 9451 1.740025 GTCCTGCTTGGTAAGTGATGC 59.260 52.381 0.00 0.00 37.07 3.91
7013 9538 1.741770 CTTACGGAGGTGCCTGTGC 60.742 63.158 0.00 0.00 38.26 4.57
7034 9561 8.074474 TGTGCATATTTGTTTTCAGTCAATTG 57.926 30.769 0.00 0.00 0.00 2.32
7050 9577 7.485595 TCAGTCAATTGATCACGCAAATAAATG 59.514 33.333 12.12 0.00 0.00 2.32
7051 9578 7.274033 CAGTCAATTGATCACGCAAATAAATGT 59.726 33.333 12.12 0.00 0.00 2.71
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
48 55 3.788227 TGTGGTTTGCATACTTCTCCT 57.212 42.857 7.25 0.00 0.00 3.69
189 247 4.883585 TCCAATGAGAGAAATATGTGTGCC 59.116 41.667 0.00 0.00 0.00 5.01
209 267 9.368674 CACTGTTATTCAATTGCATAAATTCCA 57.631 29.630 11.39 5.68 36.28 3.53
282 366 7.039923 AGCCATAAATATGCCATCTTGAGAAAG 60.040 37.037 0.00 0.00 32.40 2.62
307 391 4.272504 TCACGCTCAAACAACTTTAGGAAG 59.727 41.667 0.00 0.00 38.87 3.46
313 397 4.165779 CAAAGTCACGCTCAAACAACTTT 58.834 39.130 0.00 0.00 37.41 2.66
315 399 2.477863 GCAAAGTCACGCTCAAACAACT 60.478 45.455 0.00 0.00 0.00 3.16
317 401 1.742831 AGCAAAGTCACGCTCAAACAA 59.257 42.857 0.00 0.00 31.16 2.83
404 488 3.512033 GATACAGTCGAGCAGGTCTTT 57.488 47.619 0.00 0.00 0.00 2.52
515 601 7.254252 CGAAAGCTTCTGAACTTGTCCATATAG 60.254 40.741 0.00 0.00 0.00 1.31
517 603 5.352569 CGAAAGCTTCTGAACTTGTCCATAT 59.647 40.000 0.00 0.00 0.00 1.78
666 755 6.313658 GCAGGAACTTGTTGTGATTTTTCTTT 59.686 34.615 0.00 0.00 34.60 2.52
710 815 7.249858 GCTCCGTTTATTAGAGTATACTAGGC 58.750 42.308 5.09 0.00 0.00 3.93
790 895 0.659427 CATGTGCGCAGGTGGATTAG 59.341 55.000 12.22 0.00 0.00 1.73
799 904 0.656259 CTCCAATCTCATGTGCGCAG 59.344 55.000 12.22 0.00 0.00 5.18
843 948 4.495184 GCGAACGTTCCTTCAAGAAAAAGA 60.495 41.667 22.07 0.00 0.00 2.52
855 960 0.677842 AAGGTACAGCGAACGTTCCT 59.322 50.000 22.07 16.47 35.85 3.36
883 988 4.709944 ACCAATATATCCCCTATCCAGCA 58.290 43.478 0.00 0.00 0.00 4.41
889 996 4.962995 CAGGTCGACCAATATATCCCCTAT 59.037 45.833 35.00 7.40 38.89 2.57
894 1001 3.576982 TGACCAGGTCGACCAATATATCC 59.423 47.826 35.00 15.61 38.89 2.59
902 1009 0.830023 TGACATGACCAGGTCGACCA 60.830 55.000 35.00 15.76 44.29 4.02
916 1023 3.987404 GCCGGAGCTTGTTGACAT 58.013 55.556 5.05 0.00 35.50 3.06
952 1063 7.666388 CGGAATATATATAGAGAGGGGTAGGTG 59.334 44.444 0.00 0.00 0.00 4.00
960 1071 8.090250 CGACTTCCGGAATATATATAGAGAGG 57.910 42.308 19.21 2.92 33.91 3.69
1065 1176 1.498865 CCGCAAGAAGCAACACGAGT 61.499 55.000 0.00 0.00 46.13 4.18
1069 1180 2.050077 GGCCGCAAGAAGCAACAC 60.050 61.111 0.00 0.00 46.13 3.32
1121 1232 2.046988 CATGCTCACCGTCAGCCA 60.047 61.111 0.00 0.00 35.89 4.75
1153 1264 7.610305 GGAAAACCTAACACTTAAGATCCATGA 59.390 37.037 10.09 0.00 0.00 3.07
1155 1266 6.890268 GGGAAAACCTAACACTTAAGATCCAT 59.110 38.462 10.09 0.00 35.85 3.41
1293 1416 1.008206 AGCTCATCCCTCTCCTGACTT 59.992 52.381 0.00 0.00 0.00 3.01
1614 2577 2.191375 CCTGGTGATGCGGCAGAT 59.809 61.111 9.25 0.00 0.00 2.90
1722 2685 2.755655 CCCTATCGATCTACCAATCGCT 59.244 50.000 0.00 0.00 46.28 4.93
1741 2704 1.523758 CATCCCATTAGCTAACGCCC 58.476 55.000 8.70 0.00 36.60 6.13
1927 2898 7.897575 TTTGGTGTGCAATTTGGAATTATAC 57.102 32.000 0.00 0.00 0.00 1.47
1937 2908 5.596845 ACGAGTAAATTTGGTGTGCAATTT 58.403 33.333 0.00 0.00 36.69 1.82
2000 2971 1.406477 GGTAAAGGCCCGGTCAAGTAG 60.406 57.143 0.00 0.00 0.00 2.57
2009 2980 2.122783 TGAAAGATGGTAAAGGCCCG 57.877 50.000 0.00 0.00 0.00 6.13
2099 3806 6.723298 TTGCGGGGAAATAAATGTATTCAT 57.277 33.333 0.00 0.00 35.59 2.57
2153 3860 3.091545 TGCATTGATCCCAAAAGTCCTC 58.908 45.455 0.00 0.00 35.67 3.71
2165 3872 5.068636 ACAGGTCCAGATAATGCATTGATC 58.931 41.667 22.27 18.05 0.00 2.92
2421 4233 3.096092 ACAGTTCCTCAAGTTTTGCCAA 58.904 40.909 0.00 0.00 0.00 4.52
2483 4296 3.492102 AGCAAGAAGACAACTGGCTTA 57.508 42.857 0.00 0.00 44.93 3.09
2555 4370 3.681897 CCAGAACTGTCAATGTAGCTGTC 59.318 47.826 0.00 0.00 0.00 3.51
2560 4375 3.340814 AGGCCAGAACTGTCAATGTAG 57.659 47.619 5.01 0.00 0.00 2.74
2679 4496 9.323985 GAGAGCAGAAGTACATAAGATTGAATT 57.676 33.333 0.00 0.00 0.00 2.17
2700 4520 3.347216 TGCCCATCTAAACAAAGAGAGC 58.653 45.455 0.00 0.00 0.00 4.09
2773 4593 4.568760 GTGATCTTACAGCTCTGTTAAGCC 59.431 45.833 7.92 6.32 43.56 4.35
2820 4640 7.010367 CAGCATGCCGTATTTTCATTTTTACAT 59.990 33.333 15.66 0.00 0.00 2.29
2838 4658 4.305769 TGAAATTGTGTAAACAGCATGCC 58.694 39.130 15.66 0.00 42.53 4.40
2933 4768 9.855021 ATAATTTCTGTTTAGCGCAAACTAAAT 57.145 25.926 25.12 24.11 45.72 1.40
2952 4787 8.055279 TGAATCTTCCACTTCCACATAATTTC 57.945 34.615 0.00 0.00 0.00 2.17
2982 4833 9.607285 CTCACGTAACTAAAATTGTTGCTATTT 57.393 29.630 0.00 0.00 0.00 1.40
2983 4834 8.234546 CCTCACGTAACTAAAATTGTTGCTATT 58.765 33.333 0.00 0.00 0.00 1.73
2984 4835 7.625606 GCCTCACGTAACTAAAATTGTTGCTAT 60.626 37.037 0.00 0.00 0.00 2.97
2985 4836 6.347888 GCCTCACGTAACTAAAATTGTTGCTA 60.348 38.462 0.00 0.00 0.00 3.49
2986 4837 5.562113 GCCTCACGTAACTAAAATTGTTGCT 60.562 40.000 0.00 0.00 0.00 3.91
2987 4838 4.615541 GCCTCACGTAACTAAAATTGTTGC 59.384 41.667 0.00 0.00 0.00 4.17
2988 4839 5.997385 AGCCTCACGTAACTAAAATTGTTG 58.003 37.500 0.00 0.00 0.00 3.33
2989 4840 6.628919 AAGCCTCACGTAACTAAAATTGTT 57.371 33.333 0.00 0.00 0.00 2.83
2990 4841 6.485648 AGAAAGCCTCACGTAACTAAAATTGT 59.514 34.615 0.00 0.00 0.00 2.71
2991 4842 6.899114 AGAAAGCCTCACGTAACTAAAATTG 58.101 36.000 0.00 0.00 0.00 2.32
2992 4843 7.227910 TCAAGAAAGCCTCACGTAACTAAAATT 59.772 33.333 0.00 0.00 0.00 1.82
3235 5443 4.576330 AGAATTACCCTGAAACCTCCTG 57.424 45.455 0.00 0.00 0.00 3.86
3397 5607 8.669946 TTAATATATCACCAATTCGTCTGCAA 57.330 30.769 0.00 0.00 0.00 4.08
3847 6113 7.341445 TCCTTTTGTACAAATACACTTTGCT 57.659 32.000 21.17 0.00 41.12 3.91
4151 6425 6.235231 TGGTTCATCCAGTAATAGGAGTTC 57.765 41.667 0.00 0.00 41.93 3.01
4212 6487 0.250234 AATAAGTCAGCGCAGGAGCA 59.750 50.000 11.47 0.00 42.27 4.26
4220 6495 8.027189 TGTACATATAAGCCTAATAAGTCAGCG 58.973 37.037 0.00 0.00 0.00 5.18
4271 6563 5.106987 GCACCAAAACAGCCTTTCATATTTG 60.107 40.000 0.00 0.00 0.00 2.32
4343 6761 2.851798 CTCAGGAGCAGAAAGGCAC 58.148 57.895 0.00 0.00 35.83 5.01
4362 6780 2.414481 CTGTTCACCGAGCTCAAATGAG 59.586 50.000 15.40 6.05 44.75 2.90
4363 6781 2.224281 ACTGTTCACCGAGCTCAAATGA 60.224 45.455 15.40 10.78 0.00 2.57
4364 6782 2.146342 ACTGTTCACCGAGCTCAAATG 58.854 47.619 15.40 8.47 0.00 2.32
4365 6783 2.550830 ACTGTTCACCGAGCTCAAAT 57.449 45.000 15.40 0.00 0.00 2.32
4366 6784 3.462483 TTACTGTTCACCGAGCTCAAA 57.538 42.857 15.40 0.00 0.00 2.69
4367 6785 3.462483 TTTACTGTTCACCGAGCTCAA 57.538 42.857 15.40 0.00 0.00 3.02
4368 6786 3.462483 TTTTACTGTTCACCGAGCTCA 57.538 42.857 15.40 0.00 0.00 4.26
4369 6787 6.476243 TTTATTTTACTGTTCACCGAGCTC 57.524 37.500 2.73 2.73 0.00 4.09
4370 6788 6.870971 TTTTATTTTACTGTTCACCGAGCT 57.129 33.333 0.00 0.00 0.00 4.09
4419 6837 7.164803 ACTTTTGTCAATGTTTCTCCCAAAAA 58.835 30.769 0.00 0.00 32.07 1.94
4420 6838 6.706295 ACTTTTGTCAATGTTTCTCCCAAAA 58.294 32.000 0.00 0.00 0.00 2.44
4421 6839 6.293004 ACTTTTGTCAATGTTTCTCCCAAA 57.707 33.333 0.00 0.00 0.00 3.28
4422 6840 5.930837 ACTTTTGTCAATGTTTCTCCCAA 57.069 34.783 0.00 0.00 0.00 4.12
4423 6841 5.656416 AGAACTTTTGTCAATGTTTCTCCCA 59.344 36.000 6.10 0.00 31.96 4.37
4424 6842 6.149129 AGAACTTTTGTCAATGTTTCTCCC 57.851 37.500 6.10 0.00 31.96 4.30
4425 6843 8.406297 ACTTAGAACTTTTGTCAATGTTTCTCC 58.594 33.333 6.42 0.00 31.96 3.71
4426 6844 9.226345 CACTTAGAACTTTTGTCAATGTTTCTC 57.774 33.333 6.42 0.00 31.96 2.87
4427 6845 7.702348 GCACTTAGAACTTTTGTCAATGTTTCT 59.298 33.333 6.10 6.96 31.96 2.52
4428 6846 7.702348 AGCACTTAGAACTTTTGTCAATGTTTC 59.298 33.333 6.10 1.04 31.96 2.78
4429 6847 7.547227 AGCACTTAGAACTTTTGTCAATGTTT 58.453 30.769 6.10 0.00 31.96 2.83
4430 6848 7.100458 AGCACTTAGAACTTTTGTCAATGTT 57.900 32.000 4.72 4.72 33.94 2.71
4431 6849 6.699575 AGCACTTAGAACTTTTGTCAATGT 57.300 33.333 0.00 0.00 0.00 2.71
4432 6850 6.074676 GCAAGCACTTAGAACTTTTGTCAATG 60.075 38.462 0.00 0.00 0.00 2.82
4433 6851 5.979517 GCAAGCACTTAGAACTTTTGTCAAT 59.020 36.000 0.00 0.00 0.00 2.57
4434 6852 5.105957 TGCAAGCACTTAGAACTTTTGTCAA 60.106 36.000 0.00 0.00 0.00 3.18
4435 6853 4.397730 TGCAAGCACTTAGAACTTTTGTCA 59.602 37.500 0.00 0.00 0.00 3.58
4436 6854 4.920376 TGCAAGCACTTAGAACTTTTGTC 58.080 39.130 0.00 0.00 0.00 3.18
4437 6855 4.981806 TGCAAGCACTTAGAACTTTTGT 57.018 36.364 0.00 0.00 0.00 2.83
4438 6856 6.645700 TTTTGCAAGCACTTAGAACTTTTG 57.354 33.333 0.00 0.00 0.00 2.44
4439 6857 7.848223 ATTTTTGCAAGCACTTAGAACTTTT 57.152 28.000 0.00 0.00 0.00 2.27
4440 6858 7.548780 TGAATTTTTGCAAGCACTTAGAACTTT 59.451 29.630 0.00 0.00 0.00 2.66
4441 6859 7.041107 TGAATTTTTGCAAGCACTTAGAACTT 58.959 30.769 0.00 0.00 0.00 2.66
4442 6860 6.572519 TGAATTTTTGCAAGCACTTAGAACT 58.427 32.000 0.00 0.00 0.00 3.01
4443 6861 6.826893 TGAATTTTTGCAAGCACTTAGAAC 57.173 33.333 0.00 0.00 0.00 3.01
4444 6862 7.208777 TGATGAATTTTTGCAAGCACTTAGAA 58.791 30.769 0.00 0.00 0.00 2.10
4445 6863 6.747125 TGATGAATTTTTGCAAGCACTTAGA 58.253 32.000 0.00 0.00 0.00 2.10
4446 6864 7.329962 TCATGATGAATTTTTGCAAGCACTTAG 59.670 33.333 0.00 0.00 0.00 2.18
4447 6865 7.153315 TCATGATGAATTTTTGCAAGCACTTA 58.847 30.769 0.00 0.00 0.00 2.24
4448 6866 5.992829 TCATGATGAATTTTTGCAAGCACTT 59.007 32.000 0.00 0.00 0.00 3.16
4449 6867 5.543714 TCATGATGAATTTTTGCAAGCACT 58.456 33.333 0.00 0.00 0.00 4.40
4450 6868 5.849357 TCATGATGAATTTTTGCAAGCAC 57.151 34.783 0.00 0.00 0.00 4.40
4451 6869 6.862711 TTTCATGATGAATTTTTGCAAGCA 57.137 29.167 8.90 0.00 36.11 3.91
4452 6870 7.480542 GTGATTTCATGATGAATTTTTGCAAGC 59.519 33.333 8.90 0.00 36.11 4.01
4453 6871 8.499967 TGTGATTTCATGATGAATTTTTGCAAG 58.500 29.630 8.90 0.00 36.11 4.01
4454 6872 8.379457 TGTGATTTCATGATGAATTTTTGCAA 57.621 26.923 8.90 0.00 36.11 4.08
4455 6873 7.964604 TGTGATTTCATGATGAATTTTTGCA 57.035 28.000 8.90 1.87 36.11 4.08
4456 6874 9.485591 GAATGTGATTTCATGATGAATTTTTGC 57.514 29.630 8.90 0.00 36.11 3.68
4457 6875 9.982291 GGAATGTGATTTCATGATGAATTTTTG 57.018 29.630 8.90 0.00 36.11 2.44
4458 6876 9.953565 AGGAATGTGATTTCATGATGAATTTTT 57.046 25.926 8.90 0.00 36.11 1.94
4464 6882 9.511272 CCTTATAGGAATGTGATTTCATGATGA 57.489 33.333 0.00 0.00 37.67 2.92
4465 6883 8.242053 GCCTTATAGGAATGTGATTTCATGATG 58.758 37.037 0.00 0.00 37.67 3.07
4466 6884 7.120285 CGCCTTATAGGAATGTGATTTCATGAT 59.880 37.037 0.00 0.00 37.67 2.45
4467 6885 6.427853 CGCCTTATAGGAATGTGATTTCATGA 59.572 38.462 0.00 0.00 37.67 3.07
4468 6886 6.205464 ACGCCTTATAGGAATGTGATTTCATG 59.795 38.462 0.00 0.00 37.67 3.07
4469 6887 6.205464 CACGCCTTATAGGAATGTGATTTCAT 59.795 38.462 0.00 0.00 37.67 2.57
4470 6888 5.527214 CACGCCTTATAGGAATGTGATTTCA 59.473 40.000 0.00 0.00 37.67 2.69
4471 6889 5.049405 CCACGCCTTATAGGAATGTGATTTC 60.049 44.000 12.05 0.00 37.67 2.17
4472 6890 4.821805 CCACGCCTTATAGGAATGTGATTT 59.178 41.667 12.05 0.00 37.67 2.17
4473 6891 4.389374 CCACGCCTTATAGGAATGTGATT 58.611 43.478 12.05 0.00 37.67 2.57
4474 6892 3.807209 GCCACGCCTTATAGGAATGTGAT 60.807 47.826 12.05 0.00 37.67 3.06
4475 6893 2.484770 GCCACGCCTTATAGGAATGTGA 60.485 50.000 12.05 0.00 37.67 3.58
4476 6894 1.873591 GCCACGCCTTATAGGAATGTG 59.126 52.381 0.00 2.20 37.67 3.21
4477 6895 1.488812 TGCCACGCCTTATAGGAATGT 59.511 47.619 0.00 0.00 37.67 2.71
4478 6896 2.254546 TGCCACGCCTTATAGGAATG 57.745 50.000 0.00 0.00 37.67 2.67
4479 6897 3.290948 TTTGCCACGCCTTATAGGAAT 57.709 42.857 0.00 0.00 37.67 3.01
4480 6898 2.791347 TTTGCCACGCCTTATAGGAA 57.209 45.000 0.00 0.00 37.67 3.36
4481 6899 2.791347 TTTTGCCACGCCTTATAGGA 57.209 45.000 0.00 0.00 37.67 2.94
4500 6918 7.474190 CATTTTGGAGCACTGAATTTGTTTTT 58.526 30.769 0.00 0.00 0.00 1.94
4501 6919 6.458615 GCATTTTGGAGCACTGAATTTGTTTT 60.459 34.615 0.00 0.00 0.00 2.43
4502 6920 5.007921 GCATTTTGGAGCACTGAATTTGTTT 59.992 36.000 0.00 0.00 0.00 2.83
4503 6921 4.512571 GCATTTTGGAGCACTGAATTTGTT 59.487 37.500 0.00 0.00 0.00 2.83
4504 6922 4.060205 GCATTTTGGAGCACTGAATTTGT 58.940 39.130 0.00 0.00 0.00 2.83
4505 6923 4.312443 AGCATTTTGGAGCACTGAATTTG 58.688 39.130 0.00 0.00 0.00 2.32
4506 6924 4.612264 AGCATTTTGGAGCACTGAATTT 57.388 36.364 0.00 0.00 0.00 1.82
4507 6925 4.612264 AAGCATTTTGGAGCACTGAATT 57.388 36.364 0.00 0.00 0.00 2.17
4508 6926 4.612264 AAAGCATTTTGGAGCACTGAAT 57.388 36.364 0.00 0.00 31.62 2.57
4525 6943 6.442112 ACTCTGAAATGCTACTTTCAAAAGC 58.558 36.000 2.43 0.00 42.78 3.51
4526 6944 8.017946 GGTACTCTGAAATGCTACTTTCAAAAG 58.982 37.037 9.75 0.97 42.78 2.27
4527 6945 7.307751 CGGTACTCTGAAATGCTACTTTCAAAA 60.308 37.037 9.75 3.17 42.78 2.44
4528 6946 6.147164 CGGTACTCTGAAATGCTACTTTCAAA 59.853 38.462 9.75 0.00 42.78 2.69
4529 6947 5.637810 CGGTACTCTGAAATGCTACTTTCAA 59.362 40.000 9.75 3.33 42.78 2.69
4530 6948 5.168569 CGGTACTCTGAAATGCTACTTTCA 58.831 41.667 8.63 8.63 41.56 2.69
4531 6949 4.567159 CCGGTACTCTGAAATGCTACTTTC 59.433 45.833 0.00 0.00 36.00 2.62
4532 6950 4.020485 ACCGGTACTCTGAAATGCTACTTT 60.020 41.667 4.49 0.00 0.00 2.66
4533 6951 3.514309 ACCGGTACTCTGAAATGCTACTT 59.486 43.478 4.49 0.00 0.00 2.24
4534 6952 3.097614 ACCGGTACTCTGAAATGCTACT 58.902 45.455 4.49 0.00 0.00 2.57
4535 6953 3.521947 ACCGGTACTCTGAAATGCTAC 57.478 47.619 4.49 0.00 0.00 3.58
4536 6954 4.546829 AAACCGGTACTCTGAAATGCTA 57.453 40.909 8.00 0.00 0.00 3.49
4537 6955 3.418684 AAACCGGTACTCTGAAATGCT 57.581 42.857 8.00 0.00 0.00 3.79
4538 6956 3.252458 ACAAAACCGGTACTCTGAAATGC 59.748 43.478 8.00 0.00 0.00 3.56
4539 6957 5.432885 AACAAAACCGGTACTCTGAAATG 57.567 39.130 8.00 0.00 0.00 2.32
4540 6958 6.459670 AAAACAAAACCGGTACTCTGAAAT 57.540 33.333 8.00 0.00 0.00 2.17
4541 6959 5.900865 AAAACAAAACCGGTACTCTGAAA 57.099 34.783 8.00 0.00 0.00 2.69
4542 6960 5.900865 AAAAACAAAACCGGTACTCTGAA 57.099 34.783 8.00 0.00 0.00 3.02
4561 6979 7.996644 ACATTTCTAGAAGGTGTGGTAGAAAAA 59.003 33.333 19.05 0.00 42.09 1.94
4562 6980 7.444183 CACATTTCTAGAAGGTGTGGTAGAAAA 59.556 37.037 28.25 5.91 42.09 2.29
4563 6981 6.934645 CACATTTCTAGAAGGTGTGGTAGAAA 59.065 38.462 28.25 7.70 42.66 2.52
4564 6982 6.269077 TCACATTTCTAGAAGGTGTGGTAGAA 59.731 38.462 31.48 19.98 38.32 2.10
4565 6983 5.778241 TCACATTTCTAGAAGGTGTGGTAGA 59.222 40.000 31.48 20.21 38.32 2.59
4566 6984 6.037786 TCACATTTCTAGAAGGTGTGGTAG 57.962 41.667 31.48 18.59 38.32 3.18
4567 6985 6.620877 ATCACATTTCTAGAAGGTGTGGTA 57.379 37.500 31.48 22.45 38.32 3.25
4568 6986 4.974645 TCACATTTCTAGAAGGTGTGGT 57.025 40.909 31.48 15.09 38.32 4.16
4569 6987 6.402550 CGAAATCACATTTCTAGAAGGTGTGG 60.403 42.308 31.48 20.80 44.92 4.17
4570 6988 6.147821 ACGAAATCACATTTCTAGAAGGTGTG 59.852 38.462 29.16 29.16 44.92 3.82
4571 6989 6.147821 CACGAAATCACATTTCTAGAAGGTGT 59.852 38.462 25.87 21.26 44.92 4.16
4572 6990 6.368791 TCACGAAATCACATTTCTAGAAGGTG 59.631 38.462 23.29 23.29 44.92 4.00
4573 6991 6.369065 GTCACGAAATCACATTTCTAGAAGGT 59.631 38.462 5.12 5.72 44.92 3.50
4574 6992 6.454318 CGTCACGAAATCACATTTCTAGAAGG 60.454 42.308 5.12 5.08 44.92 3.46
4575 6993 6.308041 TCGTCACGAAATCACATTTCTAGAAG 59.692 38.462 0.00 0.00 44.92 2.85
4576 6994 6.153756 TCGTCACGAAATCACATTTCTAGAA 58.846 36.000 0.00 0.00 44.92 2.10
4577 6995 5.705902 TCGTCACGAAATCACATTTCTAGA 58.294 37.500 0.00 0.00 44.92 2.43
4578 6996 6.389622 TTCGTCACGAAATCACATTTCTAG 57.610 37.500 10.99 0.00 43.00 2.43
4592 7010 2.223363 TGCTTGCAAAAATTCGTCACGA 60.223 40.909 0.00 0.00 0.00 4.35
4593 7011 2.115595 TGCTTGCAAAAATTCGTCACG 58.884 42.857 0.00 0.00 0.00 4.35
4594 7012 3.115554 ACTGCTTGCAAAAATTCGTCAC 58.884 40.909 0.00 0.00 0.00 3.67
4595 7013 3.435105 ACTGCTTGCAAAAATTCGTCA 57.565 38.095 0.00 0.00 0.00 4.35
4596 7014 5.881637 TTAACTGCTTGCAAAAATTCGTC 57.118 34.783 0.00 0.00 0.00 4.20
4597 7015 6.312672 AGTTTTAACTGCTTGCAAAAATTCGT 59.687 30.769 0.00 0.00 37.98 3.85
4598 7016 6.704819 AGTTTTAACTGCTTGCAAAAATTCG 58.295 32.000 0.00 0.00 37.98 3.34
4599 7017 8.894409 AAAGTTTTAACTGCTTGCAAAAATTC 57.106 26.923 0.00 0.00 39.66 2.17
4600 7018 9.127006 CAAAAGTTTTAACTGCTTGCAAAAATT 57.873 25.926 0.00 3.29 39.66 1.82
4601 7019 8.296000 ACAAAAGTTTTAACTGCTTGCAAAAAT 58.704 25.926 0.00 0.00 39.66 1.82
4602 7020 7.643579 ACAAAAGTTTTAACTGCTTGCAAAAA 58.356 26.923 0.00 0.00 39.66 1.94
4603 7021 7.041780 TGACAAAAGTTTTAACTGCTTGCAAAA 60.042 29.630 0.00 0.00 39.66 2.44
4604 7022 6.425114 TGACAAAAGTTTTAACTGCTTGCAAA 59.575 30.769 0.00 0.00 39.66 3.68
4605 7023 5.928839 TGACAAAAGTTTTAACTGCTTGCAA 59.071 32.000 0.00 0.00 39.66 4.08
4606 7024 5.473931 TGACAAAAGTTTTAACTGCTTGCA 58.526 33.333 0.00 0.00 39.66 4.08
4607 7025 6.401955 TTGACAAAAGTTTTAACTGCTTGC 57.598 33.333 0.00 9.36 39.66 4.01
4608 7026 7.962917 ACATTGACAAAAGTTTTAACTGCTTG 58.037 30.769 0.00 12.59 39.66 4.01
4609 7027 8.546597 AACATTGACAAAAGTTTTAACTGCTT 57.453 26.923 0.00 0.00 39.66 3.91
4610 7028 8.546597 AAACATTGACAAAAGTTTTAACTGCT 57.453 26.923 13.35 0.00 39.66 4.24
4611 7029 8.655970 AGAAACATTGACAAAAGTTTTAACTGC 58.344 29.630 17.76 8.51 37.33 4.40
4613 7031 9.366216 GGAGAAACATTGACAAAAGTTTTAACT 57.634 29.630 17.76 12.68 37.33 2.24
4614 7032 8.600625 GGGAGAAACATTGACAAAAGTTTTAAC 58.399 33.333 17.76 13.29 37.33 2.01
4615 7033 7.766738 GGGGAGAAACATTGACAAAAGTTTTAA 59.233 33.333 17.76 0.00 37.33 1.52
4616 7034 7.093289 TGGGGAGAAACATTGACAAAAGTTTTA 60.093 33.333 17.76 0.00 37.33 1.52
4617 7035 6.112734 GGGGAGAAACATTGACAAAAGTTTT 58.887 36.000 17.76 0.00 37.33 2.43
4618 7036 5.188751 TGGGGAGAAACATTGACAAAAGTTT 59.811 36.000 17.09 17.09 39.28 2.66
4619 7037 4.714308 TGGGGAGAAACATTGACAAAAGTT 59.286 37.500 0.00 0.00 0.00 2.66
4620 7038 4.285863 TGGGGAGAAACATTGACAAAAGT 58.714 39.130 0.00 0.00 0.00 2.66
4621 7039 4.935352 TGGGGAGAAACATTGACAAAAG 57.065 40.909 0.00 0.00 0.00 2.27
4622 7040 5.683876 TTTGGGGAGAAACATTGACAAAA 57.316 34.783 0.00 0.00 0.00 2.44
4623 7041 5.885449 ATTTGGGGAGAAACATTGACAAA 57.115 34.783 0.00 0.00 0.00 2.83
4624 7042 5.885449 AATTTGGGGAGAAACATTGACAA 57.115 34.783 0.00 0.00 0.00 3.18
4625 7043 5.454471 CCAAATTTGGGGAGAAACATTGACA 60.454 40.000 26.87 0.00 44.70 3.58
4626 7044 4.996758 CCAAATTTGGGGAGAAACATTGAC 59.003 41.667 26.87 0.00 44.70 3.18
4627 7045 5.226194 CCAAATTTGGGGAGAAACATTGA 57.774 39.130 26.87 0.00 44.70 2.57
4659 7077 9.758651 GGGTGAACAGTAAAATCAAAACTAAAT 57.241 29.630 0.00 0.00 0.00 1.40
4660 7078 7.916450 CGGGTGAACAGTAAAATCAAAACTAAA 59.084 33.333 0.00 0.00 0.00 1.85
4661 7079 7.282675 TCGGGTGAACAGTAAAATCAAAACTAA 59.717 33.333 0.00 0.00 0.00 2.24
4662 7080 6.766944 TCGGGTGAACAGTAAAATCAAAACTA 59.233 34.615 0.00 0.00 0.00 2.24
4663 7081 5.591067 TCGGGTGAACAGTAAAATCAAAACT 59.409 36.000 0.00 0.00 0.00 2.66
4664 7082 5.823353 TCGGGTGAACAGTAAAATCAAAAC 58.177 37.500 0.00 0.00 0.00 2.43
4665 7083 5.506649 GCTCGGGTGAACAGTAAAATCAAAA 60.507 40.000 0.00 0.00 0.00 2.44
4666 7084 4.023536 GCTCGGGTGAACAGTAAAATCAAA 60.024 41.667 0.00 0.00 0.00 2.69
4667 7085 3.500680 GCTCGGGTGAACAGTAAAATCAA 59.499 43.478 0.00 0.00 0.00 2.57
4668 7086 3.071479 GCTCGGGTGAACAGTAAAATCA 58.929 45.455 0.00 0.00 0.00 2.57
4669 7087 3.335579 AGCTCGGGTGAACAGTAAAATC 58.664 45.455 0.00 0.00 0.00 2.17
4670 7088 3.244422 TGAGCTCGGGTGAACAGTAAAAT 60.244 43.478 9.64 0.00 0.00 1.82
4671 7089 2.103432 TGAGCTCGGGTGAACAGTAAAA 59.897 45.455 9.64 0.00 0.00 1.52
4672 7090 1.689813 TGAGCTCGGGTGAACAGTAAA 59.310 47.619 9.64 0.00 0.00 2.01
4673 7091 1.334160 TGAGCTCGGGTGAACAGTAA 58.666 50.000 9.64 0.00 0.00 2.24
4674 7092 1.557099 ATGAGCTCGGGTGAACAGTA 58.443 50.000 9.64 0.00 0.00 2.74
4675 7093 0.687354 AATGAGCTCGGGTGAACAGT 59.313 50.000 9.64 0.00 0.00 3.55
4676 7094 1.466167 CAAATGAGCTCGGGTGAACAG 59.534 52.381 9.64 0.00 0.00 3.16
4677 7095 1.071542 TCAAATGAGCTCGGGTGAACA 59.928 47.619 9.64 0.00 0.00 3.18
4678 7096 1.734465 CTCAAATGAGCTCGGGTGAAC 59.266 52.381 9.64 0.00 35.13 3.18
4679 7097 2.099141 CTCAAATGAGCTCGGGTGAA 57.901 50.000 9.64 0.00 35.13 3.18
4680 7098 3.840831 CTCAAATGAGCTCGGGTGA 57.159 52.632 9.64 10.63 35.13 4.02
4689 7107 0.674581 TGCACCCGAGCTCAAATGAG 60.675 55.000 15.40 6.05 44.75 2.90
4690 7108 0.674581 CTGCACCCGAGCTCAAATGA 60.675 55.000 15.40 0.00 34.99 2.57
4691 7109 0.674581 TCTGCACCCGAGCTCAAATG 60.675 55.000 15.40 9.02 34.99 2.32
4692 7110 0.036732 TTCTGCACCCGAGCTCAAAT 59.963 50.000 15.40 0.00 34.99 2.32
4693 7111 0.179032 TTTCTGCACCCGAGCTCAAA 60.179 50.000 15.40 0.86 34.99 2.69
4694 7112 0.884704 GTTTCTGCACCCGAGCTCAA 60.885 55.000 15.40 0.00 34.99 3.02
4695 7113 1.301716 GTTTCTGCACCCGAGCTCA 60.302 57.895 15.40 0.00 34.99 4.26
4696 7114 1.004440 AGTTTCTGCACCCGAGCTC 60.004 57.895 2.73 2.73 34.99 4.09
4697 7115 1.004440 GAGTTTCTGCACCCGAGCT 60.004 57.895 0.00 0.00 34.99 4.09
4698 7116 2.035442 GGAGTTTCTGCACCCGAGC 61.035 63.158 0.00 0.00 0.00 5.03
4699 7117 0.951040 GTGGAGTTTCTGCACCCGAG 60.951 60.000 9.63 0.00 44.99 4.63
4700 7118 1.070786 GTGGAGTTTCTGCACCCGA 59.929 57.895 9.63 0.00 44.99 5.14
4701 7119 3.655481 GTGGAGTTTCTGCACCCG 58.345 61.111 9.63 0.00 44.99 5.28
4704 7122 1.557443 CGGACGTGGAGTTTCTGCAC 61.557 60.000 10.52 10.52 46.73 4.57
4705 7123 1.300620 CGGACGTGGAGTTTCTGCA 60.301 57.895 0.00 0.00 0.00 4.41
4706 7124 2.668280 GCGGACGTGGAGTTTCTGC 61.668 63.158 0.00 0.00 0.00 4.26
4707 7125 2.027625 GGCGGACGTGGAGTTTCTG 61.028 63.158 0.00 0.00 0.00 3.02
4708 7126 0.896940 TAGGCGGACGTGGAGTTTCT 60.897 55.000 0.00 0.00 0.00 2.52
4709 7127 0.735287 GTAGGCGGACGTGGAGTTTC 60.735 60.000 0.00 0.00 0.00 2.78
4710 7128 1.291272 GTAGGCGGACGTGGAGTTT 59.709 57.895 0.00 0.00 0.00 2.66
4711 7129 2.968206 GTAGGCGGACGTGGAGTT 59.032 61.111 0.00 0.00 0.00 3.01
4712 7130 3.437795 CGTAGGCGGACGTGGAGT 61.438 66.667 0.00 0.00 38.04 3.85
4744 7162 5.915758 GCTGTAAGACTAATATGTCACTCGG 59.084 44.000 0.00 0.00 39.27 4.63
4769 7196 8.755696 AAATAATTTGCTCGATTTTGTGCTAA 57.244 26.923 0.00 0.00 0.00 3.09
4827 7305 8.820933 TCATAGCATCTTTATGACTTCTTTTCG 58.179 33.333 0.00 0.00 33.73 3.46
5034 7515 5.238650 AGGTAAGACACTGCAAATGTAACAC 59.761 40.000 3.33 2.56 0.00 3.32
5108 7589 6.919662 TGAAAATGCAGAAGTCTCACAATTTC 59.080 34.615 11.25 11.25 33.69 2.17
5112 7593 5.833406 TTGAAAATGCAGAAGTCTCACAA 57.167 34.783 0.00 0.00 0.00 3.33
5460 7947 3.827302 AGTATCTTAAGGATGACGGCGAT 59.173 43.478 16.62 0.00 35.98 4.58
5645 8137 7.961326 ATTAGTTTACGGAGGGAGTAACTAA 57.039 36.000 0.00 0.00 35.24 2.24
5652 8144 7.929785 TGCTTTTATATTAGTTTACGGAGGGAG 59.070 37.037 0.00 0.00 0.00 4.30
5653 8145 7.794041 TGCTTTTATATTAGTTTACGGAGGGA 58.206 34.615 0.00 0.00 0.00 4.20
5654 8146 8.617290 ATGCTTTTATATTAGTTTACGGAGGG 57.383 34.615 0.00 0.00 0.00 4.30
5687 8179 7.393841 AGAGCGTTTAGATCACTACTTTAGT 57.606 36.000 0.00 0.00 37.82 2.24
5688 8180 9.953697 ATAAGAGCGTTTAGATCACTACTTTAG 57.046 33.333 0.00 0.00 37.82 1.85
5703 8195 9.490379 CCTCCATAAACTAATATAAGAGCGTTT 57.510 33.333 0.00 0.00 0.00 3.60
5704 8196 8.095169 CCCTCCATAAACTAATATAAGAGCGTT 58.905 37.037 0.00 0.00 0.00 4.84
5705 8197 7.453752 TCCCTCCATAAACTAATATAAGAGCGT 59.546 37.037 0.00 0.00 0.00 5.07
5706 8198 7.837863 TCCCTCCATAAACTAATATAAGAGCG 58.162 38.462 0.00 0.00 0.00 5.03
5707 8199 8.817876 ACTCCCTCCATAAACTAATATAAGAGC 58.182 37.037 0.00 0.00 0.00 4.09
5711 8203 9.839185 AGCTACTCCCTCCATAAACTAATATAA 57.161 33.333 0.00 0.00 0.00 0.98
5712 8204 9.839185 AAGCTACTCCCTCCATAAACTAATATA 57.161 33.333 0.00 0.00 0.00 0.86
5713 8205 8.743636 AAGCTACTCCCTCCATAAACTAATAT 57.256 34.615 0.00 0.00 0.00 1.28
5714 8206 9.839185 ATAAGCTACTCCCTCCATAAACTAATA 57.161 33.333 0.00 0.00 0.00 0.98
5715 8207 8.743636 ATAAGCTACTCCCTCCATAAACTAAT 57.256 34.615 0.00 0.00 0.00 1.73
5716 8208 9.664777 TTATAAGCTACTCCCTCCATAAACTAA 57.335 33.333 0.00 0.00 0.00 2.24
5717 8209 9.310449 CTTATAAGCTACTCCCTCCATAAACTA 57.690 37.037 0.00 0.00 0.00 2.24
5718 8210 8.196378 CTTATAAGCTACTCCCTCCATAAACT 57.804 38.462 0.00 0.00 0.00 2.66
5765 8257 7.719483 TCCTTACGTTCACCCTATACAAATAG 58.281 38.462 0.00 0.00 35.73 1.73
5884 8382 2.686118 GCCAGCCCAGAAGAGATGAATT 60.686 50.000 0.00 0.00 0.00 2.17
6009 8508 9.749340 TTAATCTGGAGAATATATGGTAGTCGA 57.251 33.333 0.00 0.00 0.00 4.20
6084 8586 7.777095 AGTATTTTTGGTTGCTTTTGTAGACA 58.223 30.769 0.00 0.00 0.00 3.41
6088 8590 9.036671 GCTTTAGTATTTTTGGTTGCTTTTGTA 57.963 29.630 0.00 0.00 0.00 2.41
6239 8748 6.758886 TGCCGTTACAGAAACATTTTGAATTT 59.241 30.769 0.00 0.00 38.03 1.82
6245 8754 4.640789 TGTGCCGTTACAGAAACATTTT 57.359 36.364 0.00 0.00 38.03 1.82
6249 8758 2.147958 GGATGTGCCGTTACAGAAACA 58.852 47.619 0.00 0.00 38.03 2.83
6250 8759 2.894307 GGATGTGCCGTTACAGAAAC 57.106 50.000 0.00 0.00 33.44 2.78
6416 8938 4.043812 AGCAGATGACCAAGGGCATATATT 59.956 41.667 7.58 0.00 0.00 1.28
6417 8939 3.590630 AGCAGATGACCAAGGGCATATAT 59.409 43.478 7.58 0.00 0.00 0.86
6418 8940 2.981784 AGCAGATGACCAAGGGCATATA 59.018 45.455 7.58 0.00 0.00 0.86
6419 8941 1.779092 AGCAGATGACCAAGGGCATAT 59.221 47.619 7.58 0.85 0.00 1.78
6420 8942 1.216064 AGCAGATGACCAAGGGCATA 58.784 50.000 7.58 0.00 0.00 3.14
6521 9043 5.121298 CAGTGAAAGATCTCGATGAAAAGCA 59.879 40.000 0.00 0.00 0.00 3.91
6526 9048 7.100458 TGATACAGTGAAAGATCTCGATGAA 57.900 36.000 0.00 0.00 0.00 2.57
6538 9060 3.587061 AGGGTGGTGATGATACAGTGAAA 59.413 43.478 0.00 0.00 0.00 2.69
6639 9164 6.884295 CACTAGGGAAATAAACACATCCTTCA 59.116 38.462 0.00 0.00 32.41 3.02
6654 9179 2.666098 GCCGGGAGCACTAGGGAAA 61.666 63.158 2.18 0.00 42.97 3.13
6655 9180 3.081409 GCCGGGAGCACTAGGGAA 61.081 66.667 2.18 0.00 42.97 3.97
6691 9216 6.793505 ACCCTAGTACTTGACCTATTTGAG 57.206 41.667 0.00 0.00 0.00 3.02
6692 9217 6.575649 GCAACCCTAGTACTTGACCTATTTGA 60.576 42.308 0.00 0.00 0.00 2.69
6796 9321 7.048512 GGTACCAAGTGTTCTTCTATAGCAAT 58.951 38.462 7.15 0.00 0.00 3.56
6926 9451 1.066573 CCTTGCTACTCTGGTGGTGAG 60.067 57.143 0.00 0.00 37.55 3.51
6934 9459 4.128925 TGTTATGCTCCTTGCTACTCTG 57.871 45.455 0.00 0.00 43.37 3.35
7020 9545 4.536065 TGCGTGATCAATTGACTGAAAAC 58.464 39.130 11.07 2.56 0.00 2.43
7021 9546 4.827304 TGCGTGATCAATTGACTGAAAA 57.173 36.364 11.07 0.00 0.00 2.29
7022 9547 4.827304 TTGCGTGATCAATTGACTGAAA 57.173 36.364 11.07 0.00 0.00 2.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.