Multiple sequence alignment - TraesCS4A01G449000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G449000 chr4A 100.000 3419 0 0 1 3419 715322378 715325796 0.000000e+00 6314.0
1 TraesCS4A01G449000 chr4A 90.853 2766 178 25 712 3419 714550505 714553253 0.000000e+00 3637.0
2 TraesCS4A01G449000 chr4A 91.588 1474 91 13 1969 3419 715337333 715338796 0.000000e+00 2004.0
3 TraesCS4A01G449000 chr4A 86.284 1079 108 10 1378 2431 492354395 492355458 0.000000e+00 1136.0
4 TraesCS4A01G449000 chr4A 94.140 529 18 4 665 1180 714982346 714982874 0.000000e+00 793.0
5 TraesCS4A01G449000 chr4A 87.406 397 33 2 973 1352 492352237 492352633 1.130000e-119 440.0
6 TraesCS4A01G449000 chr4A 84.848 429 49 7 2995 3419 715082204 715082620 5.280000e-113 418.0
7 TraesCS4A01G449000 chr4A 84.615 429 50 7 2995 3419 715075697 715076113 2.460000e-111 412.0
8 TraesCS4A01G449000 chr4A 89.338 272 24 4 2995 3262 715079493 715079763 1.520000e-88 337.0
9 TraesCS4A01G449000 chr4A 94.382 89 5 0 12 100 707704034 707703946 1.650000e-28 137.0
10 TraesCS4A01G449000 chr7A 89.050 2064 146 21 919 2947 18089208 18087190 0.000000e+00 2486.0
11 TraesCS4A01G449000 chr7A 90.057 704 38 4 968 1650 18553796 18554488 0.000000e+00 883.0
12 TraesCS4A01G449000 chr7A 87.500 472 53 6 2951 3419 17760104 17759636 1.080000e-149 540.0
13 TraesCS4A01G449000 chr7A 86.412 471 57 6 2951 3419 17755941 17755476 3.040000e-140 508.0
14 TraesCS4A01G449000 chr7A 84.120 466 57 10 2959 3419 18231249 18231702 5.240000e-118 435.0
15 TraesCS4A01G449000 chr7A 81.900 221 13 10 715 925 18090183 18089980 9.820000e-36 161.0
16 TraesCS4A01G449000 chr7A 94.737 38 2 0 760 797 17750767 17750730 3.680000e-05 60.2
17 TraesCS4A01G449000 chr7A 94.737 38 2 0 760 797 18090339 18090302 3.680000e-05 60.2
18 TraesCS4A01G449000 chr7A 94.737 38 2 0 760 797 18549092 18549129 3.680000e-05 60.2
19 TraesCS4A01G449000 chr7A 96.875 32 1 0 766 797 18094192 18094161 2.000000e-03 54.7
20 TraesCS4A01G449000 chr7A 92.105 38 3 0 760 797 18536794 18536831 2.000000e-03 54.7
21 TraesCS4A01G449000 chr7D 92.397 1552 89 8 901 2425 18034873 18033324 0.000000e+00 2185.0
22 TraesCS4A01G449000 chr7D 88.261 460 51 3 2951 3408 18042195 18041737 6.450000e-152 547.0
23 TraesCS4A01G449000 chr7D 81.637 501 49 16 2447 2947 18033116 18032659 3.220000e-100 375.0
24 TraesCS4A01G449000 chr7D 77.652 443 86 12 279 713 100367056 100367493 1.220000e-64 257.0
25 TraesCS4A01G449000 chr7D 82.969 229 13 9 884 1093 18036050 18035829 2.100000e-42 183.0
26 TraesCS4A01G449000 chr7D 93.478 46 2 1 634 679 99285263 99285307 2.200000e-07 67.6
27 TraesCS4A01G449000 chr7D 96.875 32 1 0 766 797 18038114 18038083 2.000000e-03 54.7
28 TraesCS4A01G449000 chr7D 100.000 28 0 0 770 797 18036483 18036456 6.000000e-03 52.8
29 TraesCS4A01G449000 chr4B 88.904 1478 122 7 973 2426 116038415 116039874 0.000000e+00 1783.0
30 TraesCS4A01G449000 chr4B 88.379 1024 92 6 1429 2431 71849648 71850665 0.000000e+00 1206.0
31 TraesCS4A01G449000 chr4B 87.988 1024 91 7 1429 2431 71802431 71803443 0.000000e+00 1181.0
32 TraesCS4A01G449000 chr4B 90.638 470 35 5 973 1433 71799968 71800437 1.740000e-172 616.0
33 TraesCS4A01G449000 chr4B 90.426 470 36 5 973 1433 71847156 71847625 8.110000e-171 610.0
34 TraesCS4A01G449000 chr4D 88.569 1321 102 9 964 2251 82145841 82147145 0.000000e+00 1557.0
35 TraesCS4A01G449000 chrUn 95.251 358 16 1 102 458 50601405 50601762 1.780000e-157 566.0
36 TraesCS4A01G449000 chrUn 94.444 90 5 0 11 100 304504656 304504567 4.600000e-29 139.0
37 TraesCS4A01G449000 chr1A 77.951 449 86 12 279 719 16387526 16387083 5.620000e-68 268.0
38 TraesCS4A01G449000 chr1A 94.565 92 4 1 15 106 547018794 547018704 1.280000e-29 141.0
39 TraesCS4A01G449000 chr1A 82.075 106 19 0 1785 1890 565142956 565142851 1.310000e-14 91.6
40 TraesCS4A01G449000 chr2D 93.617 94 6 0 7 100 546779529 546779622 1.280000e-29 141.0
41 TraesCS4A01G449000 chr2B 93.617 94 6 0 7 100 104014040 104014133 1.280000e-29 141.0
42 TraesCS4A01G449000 chr2B 80.000 165 27 6 501 661 195622542 195622380 2.160000e-22 117.0
43 TraesCS4A01G449000 chr5B 93.548 93 6 0 8 100 24512821 24512729 4.600000e-29 139.0
44 TraesCS4A01G449000 chr3D 94.444 90 5 0 11 100 52810889 52810978 4.600000e-29 139.0
45 TraesCS4A01G449000 chr3D 90.385 104 9 1 5 107 412099951 412099848 5.950000e-28 135.0
46 TraesCS4A01G449000 chr3D 74.121 313 52 20 306 613 21884598 21884886 6.040000e-18 102.0
47 TraesCS4A01G449000 chr1B 91.919 99 7 1 2 100 543038764 543038861 1.650000e-28 137.0
48 TraesCS4A01G449000 chr1B 89.362 47 5 0 615 661 664284828 664284874 3.680000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G449000 chr4A 715322378 715325796 3418 False 6314.000 6314 100.0000 1 3419 1 chr4A.!!$F3 3418
1 TraesCS4A01G449000 chr4A 714550505 714553253 2748 False 3637.000 3637 90.8530 712 3419 1 chr4A.!!$F1 2707
2 TraesCS4A01G449000 chr4A 715337333 715338796 1463 False 2004.000 2004 91.5880 1969 3419 1 chr4A.!!$F4 1450
3 TraesCS4A01G449000 chr4A 714982346 714982874 528 False 793.000 793 94.1400 665 1180 1 chr4A.!!$F2 515
4 TraesCS4A01G449000 chr4A 492352237 492355458 3221 False 788.000 1136 86.8450 973 2431 2 chr4A.!!$F5 1458
5 TraesCS4A01G449000 chr4A 715075697 715082620 6923 False 389.000 418 86.2670 2995 3419 3 chr4A.!!$F6 424
6 TraesCS4A01G449000 chr7A 18553796 18554488 692 False 883.000 883 90.0570 968 1650 1 chr7A.!!$F4 682
7 TraesCS4A01G449000 chr7A 18087190 18094192 7002 True 690.475 2486 90.6405 715 2947 4 chr7A.!!$R3 2232
8 TraesCS4A01G449000 chr7A 17755476 17760104 4628 True 524.000 540 86.9560 2951 3419 2 chr7A.!!$R2 468
9 TraesCS4A01G449000 chr7D 18032659 18042195 9536 True 566.250 2185 90.3565 766 3408 6 chr7D.!!$R1 2642
10 TraesCS4A01G449000 chr4B 116038415 116039874 1459 False 1783.000 1783 88.9040 973 2426 1 chr4B.!!$F1 1453
11 TraesCS4A01G449000 chr4B 71847156 71850665 3509 False 908.000 1206 89.4025 973 2431 2 chr4B.!!$F3 1458
12 TraesCS4A01G449000 chr4B 71799968 71803443 3475 False 898.500 1181 89.3130 973 2431 2 chr4B.!!$F2 1458
13 TraesCS4A01G449000 chr4D 82145841 82147145 1304 False 1557.000 1557 88.5690 964 2251 1 chr4D.!!$F1 1287

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
31 32 0.032813 AATACTCCCTCCGTCCGGAA 60.033 55.0 5.23 0.0 44.66 4.30 F
34 35 0.032813 ACTCCCTCCGTCCGGAAATA 60.033 55.0 5.23 0.0 44.66 1.40 F
420 421 0.037605 AAAGCGAGAGTAACACGGGG 60.038 55.0 0.00 0.0 33.53 5.73 F
571 572 0.038599 TCCCAGCACATGCATTGTCT 59.961 50.0 6.64 0.0 45.16 3.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1011 9561 0.603065 GGACATTGCCCTTGTTGACC 59.397 55.0 0.00 0.00 0.00 4.02 R
1650 14012 0.739462 GGACGTTGACCATGCGATCA 60.739 55.0 0.00 0.00 0.00 2.92 R
1926 14296 1.425267 CGAATATGGACGCGTTGCCA 61.425 55.0 20.47 20.47 38.78 4.92 R
2521 15095 0.468226 ACCAACTCGGCTTCAGTGAA 59.532 50.0 5.25 5.25 39.03 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 7.047460 TGTCTTAATAAATACTCCCTCCGTC 57.953 40.000 0.00 0.00 0.00 4.79
29 30 1.696063 TAAATACTCCCTCCGTCCGG 58.304 55.000 0.00 0.00 0.00 5.14
31 32 0.032813 AATACTCCCTCCGTCCGGAA 60.033 55.000 5.23 0.00 44.66 4.30
32 33 0.032813 ATACTCCCTCCGTCCGGAAA 60.033 55.000 5.23 0.00 44.66 3.13
33 34 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.000 5.23 0.00 44.66 2.17
34 35 0.032813 ACTCCCTCCGTCCGGAAATA 60.033 55.000 5.23 0.00 44.66 1.40
35 36 0.674534 CTCCCTCCGTCCGGAAATAG 59.325 60.000 5.23 3.15 44.66 1.73
36 37 0.032813 TCCCTCCGTCCGGAAATAGT 60.033 55.000 5.23 0.00 44.66 2.12
38 39 1.472728 CCCTCCGTCCGGAAATAGTTG 60.473 57.143 5.23 0.00 44.66 3.16
39 40 1.206371 CCTCCGTCCGGAAATAGTTGT 59.794 52.381 5.23 0.00 44.66 3.32
40 41 2.537401 CTCCGTCCGGAAATAGTTGTC 58.463 52.381 5.23 0.00 44.66 3.18
42 43 2.498481 TCCGTCCGGAAATAGTTGTCAT 59.502 45.455 5.23 0.00 42.05 3.06
43 44 2.864343 CCGTCCGGAAATAGTTGTCATC 59.136 50.000 5.23 0.00 37.50 2.92
44 45 3.517602 CGTCCGGAAATAGTTGTCATCA 58.482 45.455 5.23 0.00 0.00 3.07
45 46 3.930229 CGTCCGGAAATAGTTGTCATCAA 59.070 43.478 5.23 0.00 0.00 2.57
47 48 5.106869 CGTCCGGAAATAGTTGTCATCAAAA 60.107 40.000 5.23 0.00 35.20 2.44
48 49 6.403200 CGTCCGGAAATAGTTGTCATCAAAAT 60.403 38.462 5.23 0.00 35.20 1.82
50 51 6.657117 TCCGGAAATAGTTGTCATCAAAATGA 59.343 34.615 0.00 0.00 39.63 2.57
51 52 7.175816 TCCGGAAATAGTTGTCATCAAAATGAA 59.824 33.333 0.00 0.00 43.42 2.57
52 53 7.975616 CCGGAAATAGTTGTCATCAAAATGAAT 59.024 33.333 0.00 0.00 43.42 2.57
60 61 9.492973 AGTTGTCATCAAAATGAATAAAAAGGG 57.507 29.630 0.00 0.00 43.42 3.95
61 62 9.487790 GTTGTCATCAAAATGAATAAAAAGGGA 57.512 29.630 0.00 0.00 43.42 4.20
124 125 9.513906 TTATGATCAAGTGGATACTTTTGTTGA 57.486 29.630 0.00 0.00 44.57 3.18
126 127 8.044060 TGATCAAGTGGATACTTTTGTTGATC 57.956 34.615 12.93 12.93 44.57 2.92
127 128 6.817765 TCAAGTGGATACTTTTGTTGATCC 57.182 37.500 0.00 0.00 44.57 3.36
128 129 5.710099 TCAAGTGGATACTTTTGTTGATCCC 59.290 40.000 0.00 0.00 44.57 3.85
129 130 4.261801 AGTGGATACTTTTGTTGATCCCG 58.738 43.478 0.00 0.00 36.96 5.14
130 131 4.019681 AGTGGATACTTTTGTTGATCCCGA 60.020 41.667 0.00 0.00 36.96 5.14
132 133 5.357032 GTGGATACTTTTGTTGATCCCGATT 59.643 40.000 0.00 0.00 36.96 3.34
133 134 5.949354 TGGATACTTTTGTTGATCCCGATTT 59.051 36.000 0.00 0.00 36.96 2.17
134 135 6.127758 TGGATACTTTTGTTGATCCCGATTTG 60.128 38.462 0.00 0.00 36.96 2.32
135 136 6.127730 GGATACTTTTGTTGATCCCGATTTGT 60.128 38.462 0.00 0.00 33.49 2.83
136 137 4.870363 ACTTTTGTTGATCCCGATTTGTG 58.130 39.130 0.00 0.00 0.00 3.33
137 138 4.582656 ACTTTTGTTGATCCCGATTTGTGA 59.417 37.500 0.00 0.00 0.00 3.58
138 139 5.243730 ACTTTTGTTGATCCCGATTTGTGAT 59.756 36.000 0.00 0.00 0.00 3.06
139 140 4.963276 TTGTTGATCCCGATTTGTGATC 57.037 40.909 0.00 0.00 36.33 2.92
140 141 3.278574 TGTTGATCCCGATTTGTGATCC 58.721 45.455 0.00 0.00 35.18 3.36
142 143 1.484653 TGATCCCGATTTGTGATCCGT 59.515 47.619 0.00 0.00 35.18 4.69
143 144 1.867233 GATCCCGATTTGTGATCCGTG 59.133 52.381 0.00 0.00 30.89 4.94
145 146 1.134818 TCCCGATTTGTGATCCGTGAG 60.135 52.381 0.00 0.00 0.00 3.51
147 148 2.196749 CCGATTTGTGATCCGTGAGAG 58.803 52.381 0.00 0.00 0.00 3.20
148 149 2.159240 CCGATTTGTGATCCGTGAGAGA 60.159 50.000 0.00 0.00 0.00 3.10
149 150 3.111838 CGATTTGTGATCCGTGAGAGAG 58.888 50.000 0.00 0.00 0.00 3.20
150 151 2.370281 TTTGTGATCCGTGAGAGAGC 57.630 50.000 0.00 0.00 0.00 4.09
152 153 0.813821 TGTGATCCGTGAGAGAGCTG 59.186 55.000 0.00 0.00 0.00 4.24
153 154 1.098869 GTGATCCGTGAGAGAGCTGA 58.901 55.000 0.00 0.00 0.00 4.26
155 156 1.340502 TGATCCGTGAGAGAGCTGACT 60.341 52.381 0.00 0.00 0.00 3.41
156 157 1.748493 GATCCGTGAGAGAGCTGACTT 59.252 52.381 0.00 0.00 0.00 3.01
159 160 2.365617 TCCGTGAGAGAGCTGACTTTTT 59.634 45.455 0.00 0.00 0.00 1.94
160 161 3.572682 TCCGTGAGAGAGCTGACTTTTTA 59.427 43.478 0.00 0.00 0.00 1.52
161 162 4.220821 TCCGTGAGAGAGCTGACTTTTTAT 59.779 41.667 0.00 0.00 0.00 1.40
162 163 4.328440 CCGTGAGAGAGCTGACTTTTTATG 59.672 45.833 0.00 0.00 0.00 1.90
164 165 5.809562 CGTGAGAGAGCTGACTTTTTATGAT 59.190 40.000 0.00 0.00 0.00 2.45
165 166 6.237781 CGTGAGAGAGCTGACTTTTTATGATG 60.238 42.308 0.00 0.00 0.00 3.07
167 168 4.880696 AGAGAGCTGACTTTTTATGATGCC 59.119 41.667 0.00 0.00 0.00 4.40
169 170 5.994250 AGAGCTGACTTTTTATGATGCCTA 58.006 37.500 0.00 0.00 0.00 3.93
171 172 7.059156 AGAGCTGACTTTTTATGATGCCTATT 58.941 34.615 0.00 0.00 0.00 1.73
174 175 9.359653 AGCTGACTTTTTATGATGCCTATTTAT 57.640 29.630 0.00 0.00 0.00 1.40
175 176 9.403110 GCTGACTTTTTATGATGCCTATTTATG 57.597 33.333 0.00 0.00 0.00 1.90
180 181 9.918630 CTTTTTATGATGCCTATTTATGAAGGG 57.081 33.333 0.00 0.00 33.17 3.95
181 182 7.466746 TTTATGATGCCTATTTATGAAGGGC 57.533 36.000 9.18 9.18 42.73 5.19
184 185 3.951563 TGCCTATTTATGAAGGGCAGT 57.048 42.857 13.21 0.00 46.35 4.40
185 186 3.554934 TGCCTATTTATGAAGGGCAGTG 58.445 45.455 13.21 0.00 46.35 3.66
186 187 2.887152 GCCTATTTATGAAGGGCAGTGG 59.113 50.000 10.66 0.00 42.08 4.00
187 188 2.887152 CCTATTTATGAAGGGCAGTGGC 59.113 50.000 8.47 8.47 40.13 5.01
188 189 1.392589 ATTTATGAAGGGCAGTGGCG 58.607 50.000 10.99 0.00 42.47 5.69
189 190 0.326595 TTTATGAAGGGCAGTGGCGA 59.673 50.000 10.99 0.00 42.47 5.54
190 191 0.392461 TTATGAAGGGCAGTGGCGAC 60.392 55.000 10.99 5.14 42.47 5.19
191 192 1.549243 TATGAAGGGCAGTGGCGACA 61.549 55.000 10.99 10.59 42.47 4.35
192 193 2.281484 GAAGGGCAGTGGCGACAA 60.281 61.111 10.99 0.00 46.06 3.18
193 194 2.594592 AAGGGCAGTGGCGACAAC 60.595 61.111 10.99 0.00 46.06 3.32
208 209 2.831685 ACAACGGCTTGTCAGACATA 57.168 45.000 3.45 0.00 35.57 2.29
209 210 3.334583 ACAACGGCTTGTCAGACATAT 57.665 42.857 3.45 0.00 35.57 1.78
210 211 3.002791 ACAACGGCTTGTCAGACATATG 58.997 45.455 3.45 0.00 35.57 1.78
211 212 2.315925 ACGGCTTGTCAGACATATGG 57.684 50.000 3.45 0.00 0.00 2.74
212 213 1.555075 ACGGCTTGTCAGACATATGGT 59.445 47.619 3.45 0.00 0.00 3.55
213 214 2.764010 ACGGCTTGTCAGACATATGGTA 59.236 45.455 3.45 0.00 0.00 3.25
214 215 3.181475 ACGGCTTGTCAGACATATGGTAG 60.181 47.826 3.45 0.00 0.00 3.18
215 216 3.181475 CGGCTTGTCAGACATATGGTAGT 60.181 47.826 3.45 0.00 0.00 2.73
217 218 5.186198 GGCTTGTCAGACATATGGTAGTTT 58.814 41.667 3.45 0.00 0.00 2.66
219 220 5.065218 GCTTGTCAGACATATGGTAGTTTGG 59.935 44.000 3.45 0.00 0.00 3.28
220 221 5.755409 TGTCAGACATATGGTAGTTTGGT 57.245 39.130 7.80 0.00 0.00 3.67
221 222 5.487433 TGTCAGACATATGGTAGTTTGGTG 58.513 41.667 7.80 0.00 0.00 4.17
222 223 4.876107 GTCAGACATATGGTAGTTTGGTGG 59.124 45.833 7.80 0.00 0.00 4.61
224 225 4.876107 CAGACATATGGTAGTTTGGTGGTC 59.124 45.833 7.80 0.00 0.00 4.02
226 227 5.962031 AGACATATGGTAGTTTGGTGGTCTA 59.038 40.000 7.80 0.00 30.78 2.59
228 229 3.629142 ATGGTAGTTTGGTGGTCTAGC 57.371 47.619 0.00 0.00 34.20 3.42
229 230 2.331166 TGGTAGTTTGGTGGTCTAGCA 58.669 47.619 0.00 0.00 39.00 3.49
230 231 2.706723 TGGTAGTTTGGTGGTCTAGCAA 59.293 45.455 0.00 0.00 44.45 3.91
234 235 3.944087 AGTTTGGTGGTCTAGCAATCTC 58.056 45.455 1.38 0.00 45.35 2.75
235 236 3.327757 AGTTTGGTGGTCTAGCAATCTCA 59.672 43.478 1.38 0.00 45.35 3.27
236 237 4.072131 GTTTGGTGGTCTAGCAATCTCAA 58.928 43.478 1.38 0.00 45.35 3.02
238 239 3.877559 TGGTGGTCTAGCAATCTCAATG 58.122 45.455 0.00 0.00 33.01 2.82
239 240 2.615912 GGTGGTCTAGCAATCTCAATGC 59.384 50.000 0.00 0.00 44.15 3.56
240 241 3.273434 GTGGTCTAGCAATCTCAATGCA 58.727 45.455 0.00 0.00 46.22 3.96
242 243 4.337555 GTGGTCTAGCAATCTCAATGCAAT 59.662 41.667 0.00 0.00 46.22 3.56
243 244 4.951715 TGGTCTAGCAATCTCAATGCAATT 59.048 37.500 0.00 0.00 46.22 2.32
244 245 5.419788 TGGTCTAGCAATCTCAATGCAATTT 59.580 36.000 0.00 0.00 46.22 1.82
245 246 6.071221 TGGTCTAGCAATCTCAATGCAATTTT 60.071 34.615 0.00 0.00 46.22 1.82
246 247 6.815142 GGTCTAGCAATCTCAATGCAATTTTT 59.185 34.615 0.00 0.00 46.22 1.94
248 249 9.525409 GTCTAGCAATCTCAATGCAATTTTTAT 57.475 29.630 0.00 0.00 46.22 1.40
293 294 9.660180 ACTTCTAAATTCATCTACAAGGAAGAC 57.340 33.333 0.00 0.00 33.19 3.01
294 295 9.103861 CTTCTAAATTCATCTACAAGGAAGACC 57.896 37.037 0.00 0.00 31.30 3.85
295 296 7.565680 TCTAAATTCATCTACAAGGAAGACCC 58.434 38.462 0.00 0.00 36.73 4.46
296 297 3.887621 TTCATCTACAAGGAAGACCCG 57.112 47.619 0.00 0.00 40.87 5.28
299 300 1.344065 TCTACAAGGAAGACCCGCAA 58.656 50.000 0.00 0.00 40.87 4.85
302 303 1.029681 ACAAGGAAGACCCGCAAAAC 58.970 50.000 0.00 0.00 40.87 2.43
304 305 1.001378 CAAGGAAGACCCGCAAAACAG 60.001 52.381 0.00 0.00 40.87 3.16
305 306 1.172812 AGGAAGACCCGCAAAACAGC 61.173 55.000 0.00 0.00 40.87 4.40
319 320 6.482451 GCAAAACAGCGATATATGTTTGAC 57.518 37.500 11.73 6.01 46.16 3.18
320 321 5.455525 GCAAAACAGCGATATATGTTTGACC 59.544 40.000 11.73 3.56 46.16 4.02
321 322 6.550843 CAAAACAGCGATATATGTTTGACCA 58.449 36.000 11.73 0.00 46.16 4.02
322 323 5.991328 AACAGCGATATATGTTTGACCAG 57.009 39.130 0.00 0.00 36.23 4.00
324 325 5.050490 ACAGCGATATATGTTTGACCAGAC 58.950 41.667 0.00 0.00 0.00 3.51
325 326 5.049828 CAGCGATATATGTTTGACCAGACA 58.950 41.667 0.00 0.00 0.00 3.41
326 327 5.698089 CAGCGATATATGTTTGACCAGACAT 59.302 40.000 10.39 10.39 39.19 3.06
327 328 6.203530 CAGCGATATATGTTTGACCAGACATT 59.796 38.462 10.74 3.65 37.35 2.71
328 329 6.767902 AGCGATATATGTTTGACCAGACATTT 59.232 34.615 10.74 6.66 37.35 2.32
329 330 7.283127 AGCGATATATGTTTGACCAGACATTTT 59.717 33.333 10.74 3.74 37.35 1.82
330 331 7.915397 GCGATATATGTTTGACCAGACATTTTT 59.085 33.333 10.74 0.67 37.35 1.94
334 335 8.816640 ATATGTTTGACCAGACATTTTTGTTC 57.183 30.769 10.74 0.00 37.35 3.18
336 337 6.459066 TGTTTGACCAGACATTTTTGTTCAA 58.541 32.000 0.00 0.00 0.00 2.69
337 338 7.102346 TGTTTGACCAGACATTTTTGTTCAAT 58.898 30.769 0.00 0.00 0.00 2.57
338 339 7.605691 TGTTTGACCAGACATTTTTGTTCAATT 59.394 29.630 0.00 0.00 0.00 2.32
339 340 8.450180 GTTTGACCAGACATTTTTGTTCAATTT 58.550 29.630 0.00 0.00 0.00 1.82
340 341 8.558973 TTGACCAGACATTTTTGTTCAATTTT 57.441 26.923 0.00 0.00 0.00 1.82
343 344 6.373774 ACCAGACATTTTTGTTCAATTTTGCA 59.626 30.769 0.00 0.00 0.00 4.08
344 345 7.094463 ACCAGACATTTTTGTTCAATTTTGCAA 60.094 29.630 0.00 0.00 0.00 4.08
346 347 9.932699 CAGACATTTTTGTTCAATTTTGCAATA 57.067 25.926 0.00 0.00 0.00 1.90
348 349 9.713740 GACATTTTTGTTCAATTTTGCAATACA 57.286 25.926 0.00 0.00 0.00 2.29
352 353 9.512435 TTTTTGTTCAATTTTGCAATACAATGG 57.488 25.926 0.00 0.00 38.31 3.16
353 354 6.798315 TGTTCAATTTTGCAATACAATGGG 57.202 33.333 0.00 0.00 38.31 4.00
354 355 5.704515 TGTTCAATTTTGCAATACAATGGGG 59.295 36.000 0.00 0.00 38.31 4.96
355 356 5.752036 TCAATTTTGCAATACAATGGGGA 57.248 34.783 0.00 0.00 38.31 4.81
356 357 5.486526 TCAATTTTGCAATACAATGGGGAC 58.513 37.500 0.00 0.00 38.31 4.46
357 358 3.971245 TTTTGCAATACAATGGGGACC 57.029 42.857 0.00 0.00 41.72 4.46
371 372 1.981256 GGGACCATTTATCGCCATGT 58.019 50.000 0.00 0.00 0.00 3.21
373 374 2.571212 GGACCATTTATCGCCATGTGA 58.429 47.619 0.00 0.00 0.00 3.58
374 375 2.290641 GGACCATTTATCGCCATGTGAC 59.709 50.000 0.00 0.00 0.00 3.67
375 376 1.939934 ACCATTTATCGCCATGTGACG 59.060 47.619 0.00 0.00 0.00 4.35
376 377 1.939934 CCATTTATCGCCATGTGACGT 59.060 47.619 0.00 0.00 0.00 4.34
377 378 2.286359 CCATTTATCGCCATGTGACGTG 60.286 50.000 0.00 0.00 0.00 4.49
379 380 2.595124 TTATCGCCATGTGACGTGAT 57.405 45.000 6.33 0.00 33.88 3.06
380 381 2.595124 TATCGCCATGTGACGTGATT 57.405 45.000 6.33 0.00 31.85 2.57
381 382 1.290203 ATCGCCATGTGACGTGATTC 58.710 50.000 6.33 0.00 0.00 2.52
382 383 0.037790 TCGCCATGTGACGTGATTCA 60.038 50.000 6.33 0.00 0.00 2.57
383 384 0.371301 CGCCATGTGACGTGATTCAG 59.629 55.000 6.33 0.00 0.00 3.02
387 388 2.354103 CCATGTGACGTGATTCAGAGGT 60.354 50.000 6.33 0.00 0.00 3.85
388 389 2.724977 TGTGACGTGATTCAGAGGTC 57.275 50.000 0.00 5.80 0.00 3.85
389 390 1.272490 TGTGACGTGATTCAGAGGTCC 59.728 52.381 0.00 0.00 0.00 4.46
390 391 0.526211 TGACGTGATTCAGAGGTCCG 59.474 55.000 0.00 1.61 0.00 4.79
391 392 0.526662 GACGTGATTCAGAGGTCCGT 59.473 55.000 0.00 0.00 0.00 4.69
392 393 0.966920 ACGTGATTCAGAGGTCCGTT 59.033 50.000 0.00 0.00 0.00 4.44
394 395 2.224209 ACGTGATTCAGAGGTCCGTTTT 60.224 45.455 0.00 0.00 0.00 2.43
396 397 2.742589 GTGATTCAGAGGTCCGTTTTCC 59.257 50.000 0.00 0.00 0.00 3.13
397 398 2.290071 TGATTCAGAGGTCCGTTTTCCC 60.290 50.000 0.00 0.00 0.00 3.97
399 400 2.033194 CAGAGGTCCGTTTTCCCGC 61.033 63.158 0.00 0.00 0.00 6.13
400 401 2.031465 GAGGTCCGTTTTCCCGCA 59.969 61.111 0.00 0.00 0.00 5.69
401 402 1.598685 GAGGTCCGTTTTCCCGCAA 60.599 57.895 0.00 0.00 0.00 4.85
403 404 0.752376 AGGTCCGTTTTCCCGCAAAA 60.752 50.000 0.00 0.00 0.00 2.44
405 406 0.937699 GTCCGTTTTCCCGCAAAAGC 60.938 55.000 0.00 0.00 34.49 3.51
407 408 1.009449 CGTTTTCCCGCAAAAGCGA 60.009 52.632 11.83 0.00 42.97 4.93
409 410 0.309612 GTTTTCCCGCAAAAGCGAGA 59.690 50.000 11.83 0.00 34.49 4.04
410 411 0.591170 TTTTCCCGCAAAAGCGAGAG 59.409 50.000 11.83 0.10 34.88 3.20
411 412 0.534203 TTTCCCGCAAAAGCGAGAGT 60.534 50.000 11.83 0.00 34.88 3.24
412 413 0.319083 TTCCCGCAAAAGCGAGAGTA 59.681 50.000 11.83 0.00 34.88 2.59
416 417 1.136336 CCGCAAAAGCGAGAGTAACAC 60.136 52.381 11.83 0.00 34.88 3.32
418 419 1.136336 GCAAAAGCGAGAGTAACACGG 60.136 52.381 0.00 0.00 33.53 4.94
419 420 1.459592 CAAAAGCGAGAGTAACACGGG 59.540 52.381 0.00 0.00 33.53 5.28
420 421 0.037605 AAAGCGAGAGTAACACGGGG 60.038 55.000 0.00 0.00 33.53 5.73
421 422 1.885163 AAGCGAGAGTAACACGGGGG 61.885 60.000 0.00 0.00 33.53 5.40
422 423 2.345760 GCGAGAGTAACACGGGGGA 61.346 63.158 0.00 0.00 33.53 4.81
423 424 1.807886 CGAGAGTAACACGGGGGAG 59.192 63.158 0.00 0.00 0.00 4.30
424 425 1.516423 GAGAGTAACACGGGGGAGC 59.484 63.158 0.00 0.00 0.00 4.70
426 427 0.333993 AGAGTAACACGGGGGAGCTA 59.666 55.000 0.00 0.00 0.00 3.32
427 428 1.063114 AGAGTAACACGGGGGAGCTAT 60.063 52.381 0.00 0.00 0.00 2.97
430 431 1.342496 GTAACACGGGGGAGCTATACC 59.658 57.143 0.00 0.00 0.00 2.73
431 432 0.325860 AACACGGGGGAGCTATACCA 60.326 55.000 0.00 0.00 0.00 3.25
432 433 0.759436 ACACGGGGGAGCTATACCAG 60.759 60.000 0.00 2.33 0.00 4.00
433 434 0.469331 CACGGGGGAGCTATACCAGA 60.469 60.000 7.72 0.00 0.00 3.86
434 435 0.178958 ACGGGGGAGCTATACCAGAG 60.179 60.000 7.72 0.20 0.00 3.35
436 437 1.634960 GGGGGAGCTATACCAGAGTC 58.365 60.000 4.22 0.00 0.00 3.36
438 439 2.379226 GGGGGAGCTATACCAGAGTCTA 59.621 54.545 0.00 0.00 0.00 2.59
440 441 3.331294 GGGGAGCTATACCAGAGTCTAGA 59.669 52.174 0.00 0.00 0.00 2.43
442 443 4.202482 GGGAGCTATACCAGAGTCTAGACA 60.202 50.000 24.44 3.15 0.00 3.41
445 446 5.566469 AGCTATACCAGAGTCTAGACATCC 58.434 45.833 24.44 12.75 0.00 3.51
446 447 5.073827 AGCTATACCAGAGTCTAGACATCCA 59.926 44.000 24.44 5.17 0.00 3.41
448 449 6.435904 GCTATACCAGAGTCTAGACATCCATT 59.564 42.308 24.44 2.52 0.00 3.16
450 451 5.350504 ACCAGAGTCTAGACATCCATTTG 57.649 43.478 24.44 8.81 0.00 2.32
451 452 5.026121 ACCAGAGTCTAGACATCCATTTGA 58.974 41.667 24.44 0.00 0.00 2.69
452 453 5.105146 ACCAGAGTCTAGACATCCATTTGAC 60.105 44.000 24.44 3.39 0.00 3.18
453 454 5.039984 CAGAGTCTAGACATCCATTTGACG 58.960 45.833 24.44 0.00 0.00 4.35
454 455 4.098654 AGAGTCTAGACATCCATTTGACGG 59.901 45.833 24.44 0.00 0.00 4.79
455 456 4.023980 AGTCTAGACATCCATTTGACGGA 58.976 43.478 24.44 0.00 36.84 4.69
456 457 4.466370 AGTCTAGACATCCATTTGACGGAA 59.534 41.667 24.44 0.00 35.77 4.30
458 459 3.417069 AGACATCCATTTGACGGAACA 57.583 42.857 0.00 0.00 35.77 3.18
462 463 4.870363 ACATCCATTTGACGGAACAAAAG 58.130 39.130 8.27 5.07 41.88 2.27
463 464 3.363341 TCCATTTGACGGAACAAAAGC 57.637 42.857 8.27 0.00 41.88 3.51
465 466 2.035832 CCATTTGACGGAACAAAAGCCT 59.964 45.455 8.27 0.00 41.88 4.58
467 468 3.430333 TTTGACGGAACAAAAGCCTTC 57.570 42.857 0.00 0.00 36.92 3.46
468 469 0.941542 TGACGGAACAAAAGCCTTCG 59.058 50.000 0.00 0.00 0.00 3.79
469 470 0.942252 GACGGAACAAAAGCCTTCGT 59.058 50.000 0.00 0.00 0.00 3.85
470 471 0.661020 ACGGAACAAAAGCCTTCGTG 59.339 50.000 0.00 0.00 0.00 4.35
472 473 1.596954 CGGAACAAAAGCCTTCGTGTG 60.597 52.381 0.00 0.00 0.00 3.82
473 474 1.269051 GGAACAAAAGCCTTCGTGTGG 60.269 52.381 0.00 0.00 0.00 4.17
474 475 1.404035 GAACAAAAGCCTTCGTGTGGT 59.596 47.619 0.00 0.00 0.00 4.16
475 476 1.021968 ACAAAAGCCTTCGTGTGGTC 58.978 50.000 0.00 0.00 0.00 4.02
476 477 0.310854 CAAAAGCCTTCGTGTGGTCC 59.689 55.000 0.00 0.00 0.00 4.46
477 478 0.182775 AAAAGCCTTCGTGTGGTCCT 59.817 50.000 0.00 0.00 0.00 3.85
480 481 1.122019 AGCCTTCGTGTGGTCCTTCT 61.122 55.000 0.00 0.00 0.00 2.85
481 482 0.670854 GCCTTCGTGTGGTCCTTCTC 60.671 60.000 0.00 0.00 0.00 2.87
482 483 0.969894 CCTTCGTGTGGTCCTTCTCT 59.030 55.000 0.00 0.00 0.00 3.10
484 485 1.341531 CTTCGTGTGGTCCTTCTCTGT 59.658 52.381 0.00 0.00 0.00 3.41
485 486 1.410004 TCGTGTGGTCCTTCTCTGTT 58.590 50.000 0.00 0.00 0.00 3.16
488 489 2.544267 CGTGTGGTCCTTCTCTGTTTTC 59.456 50.000 0.00 0.00 0.00 2.29
490 491 3.810386 GTGTGGTCCTTCTCTGTTTTCTC 59.190 47.826 0.00 0.00 0.00 2.87
491 492 3.711704 TGTGGTCCTTCTCTGTTTTCTCT 59.288 43.478 0.00 0.00 0.00 3.10
492 493 4.202264 TGTGGTCCTTCTCTGTTTTCTCTC 60.202 45.833 0.00 0.00 0.00 3.20
493 494 4.039852 GTGGTCCTTCTCTGTTTTCTCTCT 59.960 45.833 0.00 0.00 0.00 3.10
494 495 4.282195 TGGTCCTTCTCTGTTTTCTCTCTC 59.718 45.833 0.00 0.00 0.00 3.20
495 496 4.526650 GGTCCTTCTCTGTTTTCTCTCTCT 59.473 45.833 0.00 0.00 0.00 3.10
496 497 5.011635 GGTCCTTCTCTGTTTTCTCTCTCTT 59.988 44.000 0.00 0.00 0.00 2.85
498 499 5.835819 TCCTTCTCTGTTTTCTCTCTCTTCA 59.164 40.000 0.00 0.00 0.00 3.02
499 500 6.496565 TCCTTCTCTGTTTTCTCTCTCTTCAT 59.503 38.462 0.00 0.00 0.00 2.57
500 501 7.671819 TCCTTCTCTGTTTTCTCTCTCTTCATA 59.328 37.037 0.00 0.00 0.00 2.15
501 502 8.477256 CCTTCTCTGTTTTCTCTCTCTTCATAT 58.523 37.037 0.00 0.00 0.00 1.78
502 503 9.304731 CTTCTCTGTTTTCTCTCTCTTCATATG 57.695 37.037 0.00 0.00 0.00 1.78
505 506 7.563020 TCTGTTTTCTCTCTCTTCATATGCAT 58.437 34.615 3.79 3.79 0.00 3.96
506 507 7.494952 TCTGTTTTCTCTCTCTTCATATGCATG 59.505 37.037 10.16 0.00 0.00 4.06
507 508 6.541278 TGTTTTCTCTCTCTTCATATGCATGG 59.459 38.462 10.16 1.18 32.61 3.66
510 511 1.463831 CTCTCTTCATATGCATGGCGC 59.536 52.381 10.16 0.00 42.89 6.53
511 512 0.520404 CTCTTCATATGCATGGCGCC 59.480 55.000 22.73 22.73 41.33 6.53
512 513 0.179023 TCTTCATATGCATGGCGCCA 60.179 50.000 34.80 34.80 41.33 5.69
513 514 0.039798 CTTCATATGCATGGCGCCAC 60.040 55.000 35.50 21.61 41.33 5.01
514 515 0.466007 TTCATATGCATGGCGCCACT 60.466 50.000 35.50 18.64 41.33 4.00
515 516 0.886043 TCATATGCATGGCGCCACTC 60.886 55.000 35.50 26.06 41.33 3.51
516 517 0.887836 CATATGCATGGCGCCACTCT 60.888 55.000 35.50 14.65 41.33 3.24
518 519 1.970352 TATGCATGGCGCCACTCTCA 61.970 55.000 35.50 25.59 41.33 3.27
519 520 2.515523 GCATGGCGCCACTCTCAT 60.516 61.111 35.50 12.76 32.94 2.90
521 522 1.660560 GCATGGCGCCACTCTCATTT 61.661 55.000 35.50 10.89 32.94 2.32
523 524 0.254178 ATGGCGCCACTCTCATTTCT 59.746 50.000 35.50 9.04 0.00 2.52
524 525 0.391661 TGGCGCCACTCTCATTTCTC 60.392 55.000 29.03 0.00 0.00 2.87
527 528 1.933247 CGCCACTCTCATTTCTCTCC 58.067 55.000 0.00 0.00 0.00 3.71
528 529 1.480137 CGCCACTCTCATTTCTCTCCT 59.520 52.381 0.00 0.00 0.00 3.69
529 530 2.481104 CGCCACTCTCATTTCTCTCCTC 60.481 54.545 0.00 0.00 0.00 3.71
530 531 2.158971 GCCACTCTCATTTCTCTCCTCC 60.159 54.545 0.00 0.00 0.00 4.30
531 532 3.102972 CCACTCTCATTTCTCTCCTCCA 58.897 50.000 0.00 0.00 0.00 3.86
532 533 3.132646 CCACTCTCATTTCTCTCCTCCAG 59.867 52.174 0.00 0.00 0.00 3.86
534 535 3.033184 CTCTCATTTCTCTCCTCCAGCT 58.967 50.000 0.00 0.00 0.00 4.24
535 536 2.765135 TCTCATTTCTCTCCTCCAGCTG 59.235 50.000 6.78 6.78 0.00 4.24
536 537 1.836166 TCATTTCTCTCCTCCAGCTGG 59.164 52.381 27.87 27.87 0.00 4.85
537 538 1.134159 CATTTCTCTCCTCCAGCTGGG 60.134 57.143 32.23 21.66 35.41 4.45
538 539 0.117140 TTTCTCTCCTCCAGCTGGGA 59.883 55.000 32.23 20.83 45.89 4.37
555 556 0.966179 GGAACCACACCACAAATCCC 59.034 55.000 0.00 0.00 0.00 3.85
556 557 1.698506 GAACCACACCACAAATCCCA 58.301 50.000 0.00 0.00 0.00 4.37
558 559 0.827507 ACCACACCACAAATCCCAGC 60.828 55.000 0.00 0.00 0.00 4.85
560 561 0.314935 CACACCACAAATCCCAGCAC 59.685 55.000 0.00 0.00 0.00 4.40
562 563 1.259609 CACCACAAATCCCAGCACAT 58.740 50.000 0.00 0.00 0.00 3.21
563 564 1.067425 CACCACAAATCCCAGCACATG 60.067 52.381 0.00 0.00 0.00 3.21
564 565 0.108520 CCACAAATCCCAGCACATGC 60.109 55.000 0.00 0.00 42.49 4.06
565 566 0.604073 CACAAATCCCAGCACATGCA 59.396 50.000 6.64 0.00 45.16 3.96
566 567 1.206132 CACAAATCCCAGCACATGCAT 59.794 47.619 6.64 0.00 45.16 3.96
568 569 2.276201 CAAATCCCAGCACATGCATTG 58.724 47.619 6.64 0.13 45.16 2.82
569 570 1.563924 AATCCCAGCACATGCATTGT 58.436 45.000 6.64 0.00 45.16 2.71
570 571 1.108776 ATCCCAGCACATGCATTGTC 58.891 50.000 6.64 0.00 45.16 3.18
571 572 0.038599 TCCCAGCACATGCATTGTCT 59.961 50.000 6.64 0.00 45.16 3.41
572 573 0.892755 CCCAGCACATGCATTGTCTT 59.107 50.000 6.64 0.00 45.16 3.01
573 574 1.135199 CCCAGCACATGCATTGTCTTC 60.135 52.381 6.64 0.00 45.16 2.87
574 575 1.542472 CCAGCACATGCATTGTCTTCA 59.458 47.619 6.64 0.00 45.16 3.02
576 577 1.542915 AGCACATGCATTGTCTTCACC 59.457 47.619 6.64 0.00 45.16 4.02
578 579 2.749076 GCACATGCATTGTCTTCACCTA 59.251 45.455 0.00 0.00 41.59 3.08
579 580 3.426695 GCACATGCATTGTCTTCACCTAC 60.427 47.826 0.00 0.00 41.59 3.18
581 582 4.456911 CACATGCATTGTCTTCACCTACTT 59.543 41.667 0.00 0.00 36.00 2.24
582 583 5.048504 CACATGCATTGTCTTCACCTACTTT 60.049 40.000 0.00 0.00 36.00 2.66
584 585 6.040842 ACATGCATTGTCTTCACCTACTTTTT 59.959 34.615 0.00 0.00 30.89 1.94
585 586 6.072112 TGCATTGTCTTCACCTACTTTTTC 57.928 37.500 0.00 0.00 0.00 2.29
586 587 5.827797 TGCATTGTCTTCACCTACTTTTTCT 59.172 36.000 0.00 0.00 0.00 2.52
589 590 5.888982 TGTCTTCACCTACTTTTTCTCCT 57.111 39.130 0.00 0.00 0.00 3.69
591 592 6.289064 TGTCTTCACCTACTTTTTCTCCTTC 58.711 40.000 0.00 0.00 0.00 3.46
592 593 6.126883 TGTCTTCACCTACTTTTTCTCCTTCA 60.127 38.462 0.00 0.00 0.00 3.02
595 596 7.661847 TCTTCACCTACTTTTTCTCCTTCAATC 59.338 37.037 0.00 0.00 0.00 2.67
596 597 6.837312 TCACCTACTTTTTCTCCTTCAATCA 58.163 36.000 0.00 0.00 0.00 2.57
597 598 6.936900 TCACCTACTTTTTCTCCTTCAATCAG 59.063 38.462 0.00 0.00 0.00 2.90
598 599 6.936900 CACCTACTTTTTCTCCTTCAATCAGA 59.063 38.462 0.00 0.00 0.00 3.27
600 601 8.826765 ACCTACTTTTTCTCCTTCAATCAGATA 58.173 33.333 0.00 0.00 0.00 1.98
601 602 9.103861 CCTACTTTTTCTCCTTCAATCAGATAC 57.896 37.037 0.00 0.00 0.00 2.24
602 603 9.883142 CTACTTTTTCTCCTTCAATCAGATACT 57.117 33.333 0.00 0.00 0.00 2.12
606 607 8.924511 TTTTCTCCTTCAATCAGATACTTTGT 57.075 30.769 0.00 0.00 0.00 2.83
607 608 8.924511 TTTCTCCTTCAATCAGATACTTTGTT 57.075 30.769 0.00 0.00 0.00 2.83
619 620 9.851686 ATCAGATACTTTGTTATTAGCATTGGA 57.148 29.630 0.00 0.00 0.00 3.53
620 621 9.851686 TCAGATACTTTGTTATTAGCATTGGAT 57.148 29.630 0.00 0.00 0.00 3.41
621 622 9.888878 CAGATACTTTGTTATTAGCATTGGATG 57.111 33.333 0.00 0.00 0.00 3.51
622 623 9.851686 AGATACTTTGTTATTAGCATTGGATGA 57.148 29.630 0.00 0.00 0.00 2.92
623 624 9.884465 GATACTTTGTTATTAGCATTGGATGAC 57.116 33.333 0.00 0.00 0.00 3.06
624 625 7.944729 ACTTTGTTATTAGCATTGGATGACT 57.055 32.000 0.00 0.00 0.00 3.41
626 627 7.611467 ACTTTGTTATTAGCATTGGATGACTCA 59.389 33.333 0.00 0.00 0.00 3.41
629 630 6.763135 TGTTATTAGCATTGGATGACTCACTC 59.237 38.462 0.00 0.00 0.00 3.51
630 631 2.706339 AGCATTGGATGACTCACTCC 57.294 50.000 0.00 2.23 0.00 3.85
631 632 1.911357 AGCATTGGATGACTCACTCCA 59.089 47.619 6.25 6.25 39.78 3.86
632 633 2.093075 AGCATTGGATGACTCACTCCAG 60.093 50.000 9.04 3.24 42.32 3.86
633 634 2.286872 CATTGGATGACTCACTCCAGC 58.713 52.381 9.04 0.00 42.32 4.85
634 635 1.351076 TTGGATGACTCACTCCAGCA 58.649 50.000 9.04 0.00 42.32 4.41
635 636 1.576577 TGGATGACTCACTCCAGCAT 58.423 50.000 6.25 0.00 36.63 3.79
636 637 1.483827 TGGATGACTCACTCCAGCATC 59.516 52.381 0.00 0.00 36.63 3.91
638 639 2.104451 GGATGACTCACTCCAGCATCAT 59.896 50.000 0.00 0.00 37.63 2.45
640 641 1.904537 TGACTCACTCCAGCATCATGT 59.095 47.619 0.00 0.00 0.00 3.21
641 642 2.093816 TGACTCACTCCAGCATCATGTC 60.094 50.000 0.00 0.00 0.00 3.06
642 643 1.209019 ACTCACTCCAGCATCATGTCC 59.791 52.381 0.00 0.00 0.00 4.02
643 644 0.176449 TCACTCCAGCATCATGTCCG 59.824 55.000 0.00 0.00 0.00 4.79
644 645 0.107993 CACTCCAGCATCATGTCCGT 60.108 55.000 0.00 0.00 0.00 4.69
645 646 0.107993 ACTCCAGCATCATGTCCGTG 60.108 55.000 0.00 0.00 0.00 4.94
646 647 0.812811 CTCCAGCATCATGTCCGTGG 60.813 60.000 0.00 0.00 0.00 4.94
647 648 1.221566 CCAGCATCATGTCCGTGGA 59.778 57.895 0.00 0.00 0.00 4.02
648 649 1.091771 CCAGCATCATGTCCGTGGAC 61.092 60.000 12.17 12.17 44.77 4.02
649 650 1.091771 CAGCATCATGTCCGTGGACC 61.092 60.000 16.12 0.00 43.97 4.46
650 651 1.078497 GCATCATGTCCGTGGACCA 60.078 57.895 16.12 5.26 43.97 4.02
651 652 1.369091 GCATCATGTCCGTGGACCAC 61.369 60.000 15.13 15.13 43.97 4.16
662 663 3.608662 GGACCACGTCCGGACACA 61.609 66.667 32.80 0.00 43.14 3.72
701 702 1.002773 AGACATTTTCGGGTAGGCGTT 59.997 47.619 0.00 0.00 0.00 4.84
716 717 0.947244 GCGTTGGAGATGCCCTAATG 59.053 55.000 0.00 0.00 34.03 1.90
717 718 1.475034 GCGTTGGAGATGCCCTAATGA 60.475 52.381 0.00 0.00 34.03 2.57
718 719 2.917933 CGTTGGAGATGCCCTAATGAA 58.082 47.619 0.00 0.00 34.97 2.57
719 720 2.874701 CGTTGGAGATGCCCTAATGAAG 59.125 50.000 0.00 0.00 34.97 3.02
721 722 4.273318 GTTGGAGATGCCCTAATGAAGTT 58.727 43.478 0.00 0.00 34.97 2.66
722 723 4.591321 TGGAGATGCCCTAATGAAGTTT 57.409 40.909 0.00 0.00 34.97 2.66
723 724 4.934356 TGGAGATGCCCTAATGAAGTTTT 58.066 39.130 0.00 0.00 34.97 2.43
724 725 6.073447 TGGAGATGCCCTAATGAAGTTTTA 57.927 37.500 0.00 0.00 34.97 1.52
725 726 5.885912 TGGAGATGCCCTAATGAAGTTTTAC 59.114 40.000 0.00 0.00 34.97 2.01
726 727 5.007724 GGAGATGCCCTAATGAAGTTTTACG 59.992 44.000 0.00 0.00 0.00 3.18
728 729 6.357367 AGATGCCCTAATGAAGTTTTACGAT 58.643 36.000 0.00 0.00 0.00 3.73
729 730 7.506114 AGATGCCCTAATGAAGTTTTACGATA 58.494 34.615 0.00 0.00 0.00 2.92
731 732 6.880484 TGCCCTAATGAAGTTTTACGATAGA 58.120 36.000 0.00 0.00 41.38 1.98
732 733 7.506114 TGCCCTAATGAAGTTTTACGATAGAT 58.494 34.615 0.00 0.00 41.38 1.98
733 734 7.656137 TGCCCTAATGAAGTTTTACGATAGATC 59.344 37.037 0.00 0.00 41.38 2.75
735 736 9.197694 CCCTAATGAAGTTTTACGATAGATCTG 57.802 37.037 5.18 0.00 41.38 2.90
741 742 9.737427 TGAAGTTTTACGATAGATCTGAATCTC 57.263 33.333 5.18 0.00 41.46 2.75
743 744 8.472007 AGTTTTACGATAGATCTGAATCTCCT 57.528 34.615 5.18 0.00 41.46 3.69
744 745 8.919145 AGTTTTACGATAGATCTGAATCTCCTT 58.081 33.333 5.18 0.00 41.46 3.36
745 746 9.535878 GTTTTACGATAGATCTGAATCTCCTTT 57.464 33.333 5.18 0.00 41.46 3.11
746 747 9.534565 TTTTACGATAGATCTGAATCTCCTTTG 57.465 33.333 5.18 0.00 41.46 2.77
748 749 7.353414 ACGATAGATCTGAATCTCCTTTGAA 57.647 36.000 5.18 0.00 41.46 2.69
749 750 7.786030 ACGATAGATCTGAATCTCCTTTGAAA 58.214 34.615 5.18 0.00 41.46 2.69
750 751 8.428063 ACGATAGATCTGAATCTCCTTTGAAAT 58.572 33.333 5.18 0.00 41.46 2.17
751 752 9.920133 CGATAGATCTGAATCTCCTTTGAAATA 57.080 33.333 5.18 0.00 41.46 1.40
942 9492 4.339814 CCTTAGCTAGGTACAACTCTCTGG 59.660 50.000 0.00 0.00 39.39 3.86
1005 9555 4.590400 GCATATTAGAGTGCTAATGGCG 57.410 45.455 8.09 0.00 44.79 5.69
1011 9561 0.654683 GAGTGCTAATGGCGAGCTTG 59.345 55.000 0.00 0.00 45.43 4.01
1374 9959 0.727398 GCATGGACTTGTCGGTAAGC 59.273 55.000 0.00 0.00 0.00 3.09
1650 14012 1.213094 CGTTCAAGCCGTTGACGTCT 61.213 55.000 17.92 0.00 42.60 4.18
1683 14045 3.749064 GTCCTGACGAGCGAGGCA 61.749 66.667 0.00 0.00 0.00 4.75
1748 14118 3.849951 GCTCCGAGGGATGGCGAA 61.850 66.667 0.00 0.00 0.00 4.70
1926 14296 1.516386 CGCGACGACCAGCTATGTT 60.516 57.895 0.00 0.00 0.00 2.71
1941 14311 0.675208 ATGTTGGCAACGCGTCCATA 60.675 50.000 24.03 12.34 42.51 2.74
1950 14320 3.620761 CAACGCGTCCATATTCGTACTA 58.379 45.455 14.44 0.00 34.50 1.82
2028 14403 0.455410 TGCGCCAACTAATTGATGCC 59.545 50.000 4.18 0.00 38.15 4.40
2073 14460 1.072159 GGTGGAGCAGCACAAGTCT 59.928 57.895 0.00 0.00 0.00 3.24
2076 14463 1.673665 GGAGCAGCACAAGTCTGGG 60.674 63.158 0.00 0.00 32.41 4.45
2382 14770 4.458708 GTCTCAAGCTCAACGAAACAATC 58.541 43.478 0.00 0.00 0.00 2.67
2521 15095 0.252197 GGCTGGTTGGGTATTCGAGT 59.748 55.000 0.00 0.00 0.00 4.18
2553 15150 1.476488 GAGTTGGTGTTGTGTTGCCTT 59.524 47.619 0.00 0.00 0.00 4.35
2555 15152 2.301583 AGTTGGTGTTGTGTTGCCTTTT 59.698 40.909 0.00 0.00 0.00 2.27
2556 15153 2.376808 TGGTGTTGTGTTGCCTTTTG 57.623 45.000 0.00 0.00 0.00 2.44
2557 15154 1.006086 GGTGTTGTGTTGCCTTTTGC 58.994 50.000 0.00 0.00 41.77 3.68
2578 15175 3.011566 ACAATGTGTTGTGTTCCCTCA 57.988 42.857 0.00 0.00 46.43 3.86
2612 15209 4.981389 TGTGTTTTCTTGTTTGTGTTGC 57.019 36.364 0.00 0.00 0.00 4.17
2617 15229 5.525378 TGTTTTCTTGTTTGTGTTGCTGTTT 59.475 32.000 0.00 0.00 0.00 2.83
2623 15241 6.701841 TCTTGTTTGTGTTGCTGTTTTTGTTA 59.298 30.769 0.00 0.00 0.00 2.41
2654 15272 3.093814 TCCTCGTGAGCTATGGTTGTTA 58.906 45.455 0.00 0.00 0.00 2.41
2667 15285 5.982465 ATGGTTGTTATTGTTGTTGTTGC 57.018 34.783 0.00 0.00 0.00 4.17
2668 15286 3.859961 TGGTTGTTATTGTTGTTGTTGCG 59.140 39.130 0.00 0.00 0.00 4.85
2684 15314 1.743995 GCGGTGCTCGGTTTGGTAT 60.744 57.895 2.61 0.00 39.69 2.73
2698 15328 5.630061 GGTTTGGTATTTTGATGCATTTGC 58.370 37.500 0.00 0.00 42.50 3.68
2759 15389 7.551617 AGGTAAAACCATGAAATTACTAGGACG 59.448 37.037 0.00 0.00 41.95 4.79
2796 15426 5.605534 TGCTCCTTAGTCTTCATAGCAATC 58.394 41.667 0.00 0.00 35.70 2.67
2799 15429 6.147492 GCTCCTTAGTCTTCATAGCAATCATG 59.853 42.308 0.00 0.00 0.00 3.07
2809 15439 4.517832 TCATAGCAATCATGATGTTGGAGC 59.482 41.667 9.46 7.11 0.00 4.70
2810 15440 2.029623 AGCAATCATGATGTTGGAGCC 58.970 47.619 9.46 0.00 0.00 4.70
2836 15466 4.095632 GCTAGTTTTCAAAGAGGGAGCATC 59.904 45.833 0.00 0.00 0.00 3.91
2886 15520 1.683917 CGGTATTGGACTGAGAGAGGG 59.316 57.143 0.00 0.00 36.40 4.30
2929 15563 4.709397 TCGCCCCACATGAAAAAGATAAAT 59.291 37.500 0.00 0.00 0.00 1.40
2938 15572 9.763465 CACATGAAAAAGATAAATTTTGGCATC 57.237 29.630 0.00 0.00 32.81 3.91
2957 15591 2.715046 TCTGCAGGTTTAGAATGGCTG 58.285 47.619 15.13 0.00 0.00 4.85
2984 15619 2.426522 TCCTCTCCAATTCAAAGTGCG 58.573 47.619 0.00 0.00 0.00 5.34
3214 23540 5.342259 CAGAAAAAGGAATTTTACGAAGCGG 59.658 40.000 0.00 0.00 41.27 5.52
3233 23560 9.878599 CGAAGCGGTAAAAATCATAAAATATCT 57.121 29.630 0.00 0.00 0.00 1.98
3279 23618 5.376625 AGAACATTGTGAAGCCAAGAACTA 58.623 37.500 0.00 0.00 0.00 2.24
3280 23619 6.006449 AGAACATTGTGAAGCCAAGAACTAT 58.994 36.000 0.00 0.00 0.00 2.12
3295 23634 3.054361 AGAACTATCAAAGATGGGCCGTT 60.054 43.478 0.00 0.00 0.00 4.44
3317 23656 1.165270 GGCTAACAAGTCGCCAATGT 58.835 50.000 8.15 0.00 43.25 2.71
3342 23681 1.839894 CCTAGGTCTGGGGAATGCC 59.160 63.158 0.00 0.00 0.00 4.40
3393 23732 0.318120 CAAACGCATCTTTGGCCCTT 59.682 50.000 0.00 0.00 0.00 3.95
3394 23733 1.047801 AAACGCATCTTTGGCCCTTT 58.952 45.000 0.00 0.00 0.00 3.11
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.854337 ACGGAGGGAGTATTTATTAAGACAAA 58.146 34.615 0.00 0.00 0.00 2.83
4 5 5.242393 CGGACGGAGGGAGTATTTATTAAGA 59.758 44.000 0.00 0.00 0.00 2.10
7 8 3.828451 CCGGACGGAGGGAGTATTTATTA 59.172 47.826 4.40 0.00 37.50 0.98
12 13 0.032813 TTCCGGACGGAGGGAGTATT 60.033 55.000 13.64 0.00 46.06 1.89
13 14 0.032813 TTTCCGGACGGAGGGAGTAT 60.033 55.000 13.64 0.00 46.06 2.12
15 16 0.032813 TATTTCCGGACGGAGGGAGT 60.033 55.000 13.64 0.00 46.06 3.85
17 18 0.032813 ACTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20
18 19 0.828677 AACTATTTCCGGACGGAGGG 59.171 55.000 13.64 7.89 46.06 4.30
20 21 2.094390 TGACAACTATTTCCGGACGGAG 60.094 50.000 13.64 3.57 46.06 4.63
21 22 1.894466 TGACAACTATTTCCGGACGGA 59.106 47.619 1.83 9.76 43.52 4.69
23 24 3.517602 TGATGACAACTATTTCCGGACG 58.482 45.455 1.83 0.00 0.00 4.79
24 25 5.873179 TTTGATGACAACTATTTCCGGAC 57.127 39.130 1.83 0.00 35.63 4.79
26 27 6.851609 TCATTTTGATGACAACTATTTCCGG 58.148 36.000 0.00 0.00 35.63 5.14
34 35 9.492973 CCCTTTTTATTCATTTTGATGACAACT 57.507 29.630 0.00 0.00 35.63 3.16
35 36 9.487790 TCCCTTTTTATTCATTTTGATGACAAC 57.512 29.630 0.00 0.00 35.63 3.32
98 99 9.513906 TCAACAAAAGTATCCACTTGATCATAA 57.486 29.630 0.00 0.00 44.41 1.90
99 100 9.685276 ATCAACAAAAGTATCCACTTGATCATA 57.315 29.630 0.00 0.00 44.41 2.15
100 101 8.585471 ATCAACAAAAGTATCCACTTGATCAT 57.415 30.769 0.00 0.00 44.41 2.45
101 102 7.121168 GGATCAACAAAAGTATCCACTTGATCA 59.879 37.037 15.64 0.00 44.41 2.92
102 103 7.415653 GGGATCAACAAAAGTATCCACTTGATC 60.416 40.741 8.36 8.36 44.41 2.92
107 108 4.019681 TCGGGATCAACAAAAGTATCCACT 60.020 41.667 0.00 0.00 39.79 4.00
108 109 4.258543 TCGGGATCAACAAAAGTATCCAC 58.741 43.478 0.00 0.00 39.79 4.02
109 110 4.561500 TCGGGATCAACAAAAGTATCCA 57.438 40.909 0.00 0.00 39.79 3.41
110 111 6.127730 ACAAATCGGGATCAACAAAAGTATCC 60.128 38.462 0.00 0.00 37.72 2.59
112 113 6.432783 TCACAAATCGGGATCAACAAAAGTAT 59.567 34.615 0.00 0.00 0.00 2.12
115 116 5.119931 TCACAAATCGGGATCAACAAAAG 57.880 39.130 0.00 0.00 0.00 2.27
116 117 5.336372 GGATCACAAATCGGGATCAACAAAA 60.336 40.000 6.65 0.00 39.30 2.44
118 119 3.694072 GGATCACAAATCGGGATCAACAA 59.306 43.478 6.65 0.00 39.30 2.83
120 121 2.287915 CGGATCACAAATCGGGATCAAC 59.712 50.000 6.65 0.00 39.30 3.18
121 122 2.093181 ACGGATCACAAATCGGGATCAA 60.093 45.455 6.65 0.00 39.30 2.57
123 124 1.867233 CACGGATCACAAATCGGGATC 59.133 52.381 0.00 0.00 37.34 3.36
124 125 1.484653 TCACGGATCACAAATCGGGAT 59.515 47.619 0.00 0.00 29.57 3.85
126 127 1.134818 TCTCACGGATCACAAATCGGG 60.135 52.381 0.00 0.00 0.00 5.14
127 128 2.159240 TCTCTCACGGATCACAAATCGG 60.159 50.000 0.00 0.00 0.00 4.18
128 129 3.111838 CTCTCTCACGGATCACAAATCG 58.888 50.000 0.00 0.00 0.00 3.34
129 130 2.863137 GCTCTCTCACGGATCACAAATC 59.137 50.000 0.00 0.00 0.00 2.17
130 131 2.499289 AGCTCTCTCACGGATCACAAAT 59.501 45.455 0.00 0.00 0.00 2.32
132 133 1.203287 CAGCTCTCTCACGGATCACAA 59.797 52.381 0.00 0.00 0.00 3.33
133 134 0.813821 CAGCTCTCTCACGGATCACA 59.186 55.000 0.00 0.00 0.00 3.58
134 135 1.098869 TCAGCTCTCTCACGGATCAC 58.901 55.000 0.00 0.00 0.00 3.06
135 136 1.098869 GTCAGCTCTCTCACGGATCA 58.901 55.000 0.00 0.00 0.00 2.92
136 137 1.388547 AGTCAGCTCTCTCACGGATC 58.611 55.000 0.00 0.00 0.00 3.36
137 138 1.846007 AAGTCAGCTCTCTCACGGAT 58.154 50.000 0.00 0.00 0.00 4.18
138 139 1.621992 AAAGTCAGCTCTCTCACGGA 58.378 50.000 0.00 0.00 0.00 4.69
139 140 2.447244 AAAAGTCAGCTCTCTCACGG 57.553 50.000 0.00 0.00 0.00 4.94
140 141 5.164233 TCATAAAAAGTCAGCTCTCTCACG 58.836 41.667 0.00 0.00 0.00 4.35
142 143 5.583854 GCATCATAAAAAGTCAGCTCTCTCA 59.416 40.000 0.00 0.00 0.00 3.27
143 144 5.007528 GGCATCATAAAAAGTCAGCTCTCTC 59.992 44.000 0.00 0.00 0.00 3.20
145 146 4.880696 AGGCATCATAAAAAGTCAGCTCTC 59.119 41.667 0.00 0.00 0.00 3.20
147 148 6.874288 ATAGGCATCATAAAAAGTCAGCTC 57.126 37.500 0.00 0.00 0.00 4.09
148 149 7.651027 AAATAGGCATCATAAAAAGTCAGCT 57.349 32.000 0.00 0.00 0.00 4.24
149 150 9.403110 CATAAATAGGCATCATAAAAAGTCAGC 57.597 33.333 0.00 0.00 0.00 4.26
155 156 8.367156 GCCCTTCATAAATAGGCATCATAAAAA 58.633 33.333 0.00 0.00 43.32 1.94
156 157 7.895759 GCCCTTCATAAATAGGCATCATAAAA 58.104 34.615 0.00 0.00 43.32 1.52
165 166 2.887152 CCACTGCCCTTCATAAATAGGC 59.113 50.000 0.00 0.00 44.13 3.93
167 168 2.549754 CGCCACTGCCCTTCATAAATAG 59.450 50.000 0.00 0.00 0.00 1.73
169 170 1.064758 TCGCCACTGCCCTTCATAAAT 60.065 47.619 0.00 0.00 0.00 1.40
171 172 0.392461 GTCGCCACTGCCCTTCATAA 60.392 55.000 0.00 0.00 0.00 1.90
174 175 3.113514 TTGTCGCCACTGCCCTTCA 62.114 57.895 0.00 0.00 0.00 3.02
175 176 2.281484 TTGTCGCCACTGCCCTTC 60.281 61.111 0.00 0.00 0.00 3.46
177 178 4.988598 CGTTGTCGCCACTGCCCT 62.989 66.667 0.00 0.00 0.00 5.19
181 182 2.972505 AAGCCGTTGTCGCCACTG 60.973 61.111 0.00 0.00 35.54 3.66
182 183 2.972505 CAAGCCGTTGTCGCCACT 60.973 61.111 0.00 0.00 35.54 4.00
183 184 3.276846 ACAAGCCGTTGTCGCCAC 61.277 61.111 0.00 0.00 43.88 5.01
190 191 2.352651 CCATATGTCTGACAAGCCGTTG 59.647 50.000 15.31 6.35 39.82 4.10
191 192 2.027192 ACCATATGTCTGACAAGCCGTT 60.027 45.455 15.31 0.00 0.00 4.44
192 193 1.555075 ACCATATGTCTGACAAGCCGT 59.445 47.619 15.31 6.38 0.00 5.68
193 194 2.315925 ACCATATGTCTGACAAGCCG 57.684 50.000 15.31 5.76 0.00 5.52
195 196 5.065218 CCAAACTACCATATGTCTGACAAGC 59.935 44.000 15.31 0.00 0.00 4.01
197 198 5.937540 CACCAAACTACCATATGTCTGACAA 59.062 40.000 15.31 4.96 0.00 3.18
198 199 5.487433 CACCAAACTACCATATGTCTGACA 58.513 41.667 13.60 13.60 0.00 3.58
199 200 4.876107 CCACCAAACTACCATATGTCTGAC 59.124 45.833 0.00 0.00 0.00 3.51
200 201 4.534500 ACCACCAAACTACCATATGTCTGA 59.466 41.667 1.24 0.00 0.00 3.27
201 202 4.843728 ACCACCAAACTACCATATGTCTG 58.156 43.478 1.24 0.00 0.00 3.51
202 203 4.783227 AGACCACCAAACTACCATATGTCT 59.217 41.667 1.24 0.00 0.00 3.41
203 204 5.099042 AGACCACCAAACTACCATATGTC 57.901 43.478 1.24 0.00 0.00 3.06
204 205 5.396436 GCTAGACCACCAAACTACCATATGT 60.396 44.000 1.24 0.00 0.00 2.29
205 206 5.057149 GCTAGACCACCAAACTACCATATG 58.943 45.833 0.00 0.00 0.00 1.78
208 209 2.910319 TGCTAGACCACCAAACTACCAT 59.090 45.455 0.00 0.00 0.00 3.55
209 210 2.331166 TGCTAGACCACCAAACTACCA 58.669 47.619 0.00 0.00 0.00 3.25
210 211 3.412237 TTGCTAGACCACCAAACTACC 57.588 47.619 0.00 0.00 0.00 3.18
211 212 4.833390 AGATTGCTAGACCACCAAACTAC 58.167 43.478 0.00 0.00 0.00 2.73
212 213 4.530553 TGAGATTGCTAGACCACCAAACTA 59.469 41.667 0.00 0.00 0.00 2.24
213 214 3.327757 TGAGATTGCTAGACCACCAAACT 59.672 43.478 0.00 0.00 0.00 2.66
214 215 3.674997 TGAGATTGCTAGACCACCAAAC 58.325 45.455 0.00 0.00 0.00 2.93
215 216 4.365514 TTGAGATTGCTAGACCACCAAA 57.634 40.909 0.00 0.00 0.00 3.28
217 218 3.877559 CATTGAGATTGCTAGACCACCA 58.122 45.455 0.00 0.00 0.00 4.17
219 220 3.273434 TGCATTGAGATTGCTAGACCAC 58.727 45.455 0.00 0.00 40.77 4.16
220 221 3.632643 TGCATTGAGATTGCTAGACCA 57.367 42.857 0.00 0.00 40.77 4.02
221 222 5.511234 AATTGCATTGAGATTGCTAGACC 57.489 39.130 0.00 0.00 40.77 3.85
222 223 7.823149 AAAAATTGCATTGAGATTGCTAGAC 57.177 32.000 0.00 0.00 40.77 2.59
268 269 9.103861 GGTCTTCCTTGTAGATGAATTTAGAAG 57.896 37.037 0.00 0.00 0.00 2.85
269 270 8.047310 GGGTCTTCCTTGTAGATGAATTTAGAA 58.953 37.037 0.00 0.00 0.00 2.10
270 271 7.565680 GGGTCTTCCTTGTAGATGAATTTAGA 58.434 38.462 0.00 0.00 0.00 2.10
271 272 6.480320 CGGGTCTTCCTTGTAGATGAATTTAG 59.520 42.308 0.00 0.00 0.00 1.85
272 273 6.346096 CGGGTCTTCCTTGTAGATGAATTTA 58.654 40.000 0.00 0.00 0.00 1.40
274 275 4.770795 CGGGTCTTCCTTGTAGATGAATT 58.229 43.478 0.00 0.00 0.00 2.17
276 277 2.093658 GCGGGTCTTCCTTGTAGATGAA 60.094 50.000 0.00 0.00 0.00 2.57
277 278 1.480954 GCGGGTCTTCCTTGTAGATGA 59.519 52.381 0.00 0.00 0.00 2.92
278 279 1.207089 TGCGGGTCTTCCTTGTAGATG 59.793 52.381 0.00 0.00 0.00 2.90
279 280 1.568504 TGCGGGTCTTCCTTGTAGAT 58.431 50.000 0.00 0.00 0.00 1.98
280 281 1.344065 TTGCGGGTCTTCCTTGTAGA 58.656 50.000 0.00 0.00 0.00 2.59
281 282 2.178912 TTTGCGGGTCTTCCTTGTAG 57.821 50.000 0.00 0.00 0.00 2.74
282 283 2.223745 GTTTTGCGGGTCTTCCTTGTA 58.776 47.619 0.00 0.00 0.00 2.41
283 284 1.029681 GTTTTGCGGGTCTTCCTTGT 58.970 50.000 0.00 0.00 0.00 3.16
284 285 1.001378 CTGTTTTGCGGGTCTTCCTTG 60.001 52.381 0.00 0.00 0.00 3.61
285 286 1.318576 CTGTTTTGCGGGTCTTCCTT 58.681 50.000 0.00 0.00 0.00 3.36
287 288 1.285950 GCTGTTTTGCGGGTCTTCC 59.714 57.895 0.00 0.00 0.00 3.46
288 289 4.944249 GCTGTTTTGCGGGTCTTC 57.056 55.556 0.00 0.00 0.00 2.87
296 297 5.455525 GGTCAAACATATATCGCTGTTTTGC 59.544 40.000 7.77 5.21 42.16 3.68
299 300 6.037172 GTCTGGTCAAACATATATCGCTGTTT 59.963 38.462 5.57 5.57 44.23 2.83
302 303 5.049828 TGTCTGGTCAAACATATATCGCTG 58.950 41.667 0.00 0.00 0.00 5.18
304 305 6.545504 AATGTCTGGTCAAACATATATCGC 57.454 37.500 0.00 0.00 35.10 4.58
305 306 9.225201 CAAAAATGTCTGGTCAAACATATATCG 57.775 33.333 0.00 0.00 35.10 2.92
308 309 9.906660 GAACAAAAATGTCTGGTCAAACATATA 57.093 29.630 0.00 0.00 35.10 0.86
310 311 7.776107 TGAACAAAAATGTCTGGTCAAACATA 58.224 30.769 0.00 0.00 36.35 2.29
311 312 6.638610 TGAACAAAAATGTCTGGTCAAACAT 58.361 32.000 0.00 0.00 36.35 2.71
312 313 6.030548 TGAACAAAAATGTCTGGTCAAACA 57.969 33.333 0.00 0.00 36.35 2.83
313 314 6.959671 TTGAACAAAAATGTCTGGTCAAAC 57.040 33.333 0.22 0.00 44.24 2.93
318 319 6.373774 TGCAAAATTGAACAAAAATGTCTGGT 59.626 30.769 0.00 0.00 0.00 4.00
319 320 6.783162 TGCAAAATTGAACAAAAATGTCTGG 58.217 32.000 0.00 0.00 0.00 3.86
320 321 8.844441 ATTGCAAAATTGAACAAAAATGTCTG 57.156 26.923 1.71 0.00 0.00 3.51
321 322 9.934190 GTATTGCAAAATTGAACAAAAATGTCT 57.066 25.926 1.71 0.00 0.00 3.41
322 323 9.713740 TGTATTGCAAAATTGAACAAAAATGTC 57.286 25.926 1.71 0.00 0.00 3.06
326 327 9.512435 CCATTGTATTGCAAAATTGAACAAAAA 57.488 25.926 1.71 0.00 40.91 1.94
327 328 8.133627 CCCATTGTATTGCAAAATTGAACAAAA 58.866 29.630 1.71 0.00 40.91 2.44
328 329 7.255381 CCCCATTGTATTGCAAAATTGAACAAA 60.255 33.333 1.71 0.00 40.91 2.83
329 330 6.206243 CCCCATTGTATTGCAAAATTGAACAA 59.794 34.615 1.71 8.08 40.91 2.83
330 331 5.704515 CCCCATTGTATTGCAAAATTGAACA 59.295 36.000 1.71 0.00 40.91 3.18
332 333 5.936956 GTCCCCATTGTATTGCAAAATTGAA 59.063 36.000 1.71 0.00 40.91 2.69
333 334 5.486526 GTCCCCATTGTATTGCAAAATTGA 58.513 37.500 1.71 0.00 40.91 2.57
334 335 4.635324 GGTCCCCATTGTATTGCAAAATTG 59.365 41.667 1.71 0.00 40.91 2.32
336 337 3.843027 TGGTCCCCATTGTATTGCAAAAT 59.157 39.130 1.71 0.00 40.91 1.82
337 338 3.242867 TGGTCCCCATTGTATTGCAAAA 58.757 40.909 1.71 0.00 40.91 2.44
338 339 2.894731 TGGTCCCCATTGTATTGCAAA 58.105 42.857 1.71 0.00 40.91 3.68
339 340 2.612285 TGGTCCCCATTGTATTGCAA 57.388 45.000 0.00 0.00 41.89 4.08
340 341 2.844654 ATGGTCCCCATTGTATTGCA 57.155 45.000 0.00 0.00 42.23 4.08
350 351 0.850100 ATGGCGATAAATGGTCCCCA 59.150 50.000 0.00 0.00 38.19 4.96
351 352 1.247567 CATGGCGATAAATGGTCCCC 58.752 55.000 0.00 0.00 0.00 4.81
352 353 1.608590 CACATGGCGATAAATGGTCCC 59.391 52.381 0.00 0.00 0.00 4.46
353 354 2.290641 GTCACATGGCGATAAATGGTCC 59.709 50.000 0.00 0.00 0.00 4.46
354 355 3.609103 GTCACATGGCGATAAATGGTC 57.391 47.619 0.00 0.00 0.00 4.02
365 366 1.662629 CTCTGAATCACGTCACATGGC 59.337 52.381 0.00 0.00 0.00 4.40
366 367 2.274437 CCTCTGAATCACGTCACATGG 58.726 52.381 0.00 0.00 0.00 3.66
367 368 2.926200 GACCTCTGAATCACGTCACATG 59.074 50.000 0.00 0.00 0.00 3.21
368 369 2.093973 GGACCTCTGAATCACGTCACAT 60.094 50.000 0.00 0.00 0.00 3.21
369 370 1.272490 GGACCTCTGAATCACGTCACA 59.728 52.381 0.00 0.00 0.00 3.58
370 371 1.732732 CGGACCTCTGAATCACGTCAC 60.733 57.143 0.00 0.00 0.00 3.67
371 372 0.526211 CGGACCTCTGAATCACGTCA 59.474 55.000 0.00 0.00 0.00 4.35
373 374 0.966920 AACGGACCTCTGAATCACGT 59.033 50.000 0.00 0.00 34.25 4.49
374 375 2.080286 AAACGGACCTCTGAATCACG 57.920 50.000 0.00 0.00 0.00 4.35
375 376 2.742589 GGAAAACGGACCTCTGAATCAC 59.257 50.000 0.00 0.00 0.00 3.06
376 377 2.290071 GGGAAAACGGACCTCTGAATCA 60.290 50.000 0.00 0.00 0.00 2.57
377 378 2.357075 GGGAAAACGGACCTCTGAATC 58.643 52.381 0.00 0.00 0.00 2.52
379 380 0.034337 CGGGAAAACGGACCTCTGAA 59.966 55.000 0.00 0.00 0.00 3.02
380 381 1.669440 CGGGAAAACGGACCTCTGA 59.331 57.895 0.00 0.00 0.00 3.27
381 382 2.033194 GCGGGAAAACGGACCTCTG 61.033 63.158 0.00 0.00 0.00 3.35
382 383 2.047213 TTGCGGGAAAACGGACCTCT 62.047 55.000 0.00 0.00 32.76 3.69
383 384 1.167781 TTTGCGGGAAAACGGACCTC 61.168 55.000 0.00 0.00 32.76 3.85
387 388 1.360911 GCTTTTGCGGGAAAACGGA 59.639 52.632 3.11 0.00 34.86 4.69
388 389 3.930838 GCTTTTGCGGGAAAACGG 58.069 55.556 3.11 0.00 34.86 4.44
399 400 1.459592 CCCGTGTTACTCTCGCTTTTG 59.540 52.381 0.00 0.00 0.00 2.44
400 401 1.607251 CCCCGTGTTACTCTCGCTTTT 60.607 52.381 0.00 0.00 0.00 2.27
401 402 0.037605 CCCCGTGTTACTCTCGCTTT 60.038 55.000 0.00 0.00 0.00 3.51
403 404 2.348888 CCCCCGTGTTACTCTCGCT 61.349 63.158 0.00 0.00 0.00 4.93
405 406 1.807886 CTCCCCCGTGTTACTCTCG 59.192 63.158 0.00 0.00 0.00 4.04
407 408 0.333993 TAGCTCCCCCGTGTTACTCT 59.666 55.000 0.00 0.00 0.00 3.24
409 410 2.314246 GTATAGCTCCCCCGTGTTACT 58.686 52.381 0.00 0.00 0.00 2.24
410 411 1.342496 GGTATAGCTCCCCCGTGTTAC 59.658 57.143 0.00 0.00 0.00 2.50
411 412 1.063038 TGGTATAGCTCCCCCGTGTTA 60.063 52.381 3.20 0.00 0.00 2.41
412 413 0.325860 TGGTATAGCTCCCCCGTGTT 60.326 55.000 3.20 0.00 0.00 3.32
416 417 0.178958 ACTCTGGTATAGCTCCCCCG 60.179 60.000 3.20 0.00 0.00 5.73
418 419 2.687003 AGACTCTGGTATAGCTCCCC 57.313 55.000 3.20 0.00 0.00 4.81
419 420 4.202482 TGTCTAGACTCTGGTATAGCTCCC 60.202 50.000 23.01 0.00 37.23 4.30
420 421 4.975631 TGTCTAGACTCTGGTATAGCTCC 58.024 47.826 23.01 0.00 37.23 4.70
421 422 5.646360 GGATGTCTAGACTCTGGTATAGCTC 59.354 48.000 23.01 0.00 37.23 4.09
422 423 5.073827 TGGATGTCTAGACTCTGGTATAGCT 59.926 44.000 23.01 0.00 37.23 3.32
423 424 5.317808 TGGATGTCTAGACTCTGGTATAGC 58.682 45.833 23.01 3.53 37.23 2.97
424 425 8.303156 CAAATGGATGTCTAGACTCTGGTATAG 58.697 40.741 23.01 3.91 38.27 1.31
426 427 6.841229 TCAAATGGATGTCTAGACTCTGGTAT 59.159 38.462 23.01 7.58 0.00 2.73
427 428 6.096987 GTCAAATGGATGTCTAGACTCTGGTA 59.903 42.308 23.01 2.57 0.00 3.25
430 431 5.039984 CGTCAAATGGATGTCTAGACTCTG 58.960 45.833 23.01 11.78 0.00 3.35
431 432 4.098654 CCGTCAAATGGATGTCTAGACTCT 59.901 45.833 23.01 10.94 0.00 3.24
432 433 4.098044 TCCGTCAAATGGATGTCTAGACTC 59.902 45.833 23.01 16.57 0.00 3.36
433 434 4.023980 TCCGTCAAATGGATGTCTAGACT 58.976 43.478 23.01 9.26 0.00 3.24
434 435 4.386867 TCCGTCAAATGGATGTCTAGAC 57.613 45.455 16.32 16.32 0.00 2.59
436 437 4.503910 TGTTCCGTCAAATGGATGTCTAG 58.496 43.478 0.00 0.00 32.39 2.43
438 439 3.417069 TGTTCCGTCAAATGGATGTCT 57.583 42.857 0.00 0.00 32.39 3.41
440 441 4.795962 GCTTTTGTTCCGTCAAATGGATGT 60.796 41.667 0.00 0.00 37.20 3.06
442 443 3.306019 GGCTTTTGTTCCGTCAAATGGAT 60.306 43.478 0.00 0.00 37.20 3.41
445 446 3.369546 AGGCTTTTGTTCCGTCAAATG 57.630 42.857 0.00 0.00 37.20 2.32
446 447 3.550030 CGAAGGCTTTTGTTCCGTCAAAT 60.550 43.478 0.00 0.00 37.20 2.32
448 449 1.332375 CGAAGGCTTTTGTTCCGTCAA 59.668 47.619 0.00 0.00 31.62 3.18
450 451 0.942252 ACGAAGGCTTTTGTTCCGTC 59.058 50.000 0.00 0.00 0.00 4.79
451 452 0.661020 CACGAAGGCTTTTGTTCCGT 59.339 50.000 0.00 1.98 0.00 4.69
452 453 0.661020 ACACGAAGGCTTTTGTTCCG 59.339 50.000 0.00 1.26 0.00 4.30
453 454 1.269051 CCACACGAAGGCTTTTGTTCC 60.269 52.381 11.55 0.00 0.00 3.62
454 455 1.404035 ACCACACGAAGGCTTTTGTTC 59.596 47.619 11.55 0.00 0.00 3.18
455 456 1.404035 GACCACACGAAGGCTTTTGTT 59.596 47.619 11.55 1.01 0.00 2.83
456 457 1.021968 GACCACACGAAGGCTTTTGT 58.978 50.000 0.00 5.37 0.00 2.83
458 459 0.182775 AGGACCACACGAAGGCTTTT 59.817 50.000 0.00 0.00 0.00 2.27
462 463 0.670854 GAGAAGGACCACACGAAGGC 60.671 60.000 0.00 0.00 0.00 4.35
463 464 0.969894 AGAGAAGGACCACACGAAGG 59.030 55.000 0.00 0.00 0.00 3.46
465 466 1.410004 ACAGAGAAGGACCACACGAA 58.590 50.000 0.00 0.00 0.00 3.85
467 468 2.240493 AAACAGAGAAGGACCACACG 57.760 50.000 0.00 0.00 0.00 4.49
468 469 3.809905 AGAAAACAGAGAAGGACCACAC 58.190 45.455 0.00 0.00 0.00 3.82
469 470 3.711704 AGAGAAAACAGAGAAGGACCACA 59.288 43.478 0.00 0.00 0.00 4.17
470 471 4.039852 AGAGAGAAAACAGAGAAGGACCAC 59.960 45.833 0.00 0.00 0.00 4.16
472 473 4.526650 AGAGAGAGAAAACAGAGAAGGACC 59.473 45.833 0.00 0.00 0.00 4.46
473 474 5.722021 AGAGAGAGAAAACAGAGAAGGAC 57.278 43.478 0.00 0.00 0.00 3.85
474 475 5.835819 TGAAGAGAGAGAAAACAGAGAAGGA 59.164 40.000 0.00 0.00 0.00 3.36
475 476 6.095432 TGAAGAGAGAGAAAACAGAGAAGG 57.905 41.667 0.00 0.00 0.00 3.46
476 477 9.304731 CATATGAAGAGAGAGAAAACAGAGAAG 57.695 37.037 0.00 0.00 0.00 2.85
477 478 7.763528 GCATATGAAGAGAGAGAAAACAGAGAA 59.236 37.037 6.97 0.00 0.00 2.87
480 481 6.939622 TGCATATGAAGAGAGAGAAAACAGA 58.060 36.000 6.97 0.00 0.00 3.41
481 482 7.254829 CCATGCATATGAAGAGAGAGAAAACAG 60.255 40.741 6.97 0.00 36.36 3.16
482 483 6.541278 CCATGCATATGAAGAGAGAGAAAACA 59.459 38.462 6.97 0.00 36.36 2.83
484 485 5.530171 GCCATGCATATGAAGAGAGAGAAAA 59.470 40.000 6.97 0.00 36.36 2.29
485 486 5.061853 GCCATGCATATGAAGAGAGAGAAA 58.938 41.667 6.97 0.00 36.36 2.52
488 489 2.994578 CGCCATGCATATGAAGAGAGAG 59.005 50.000 6.97 0.00 36.36 3.20
490 491 1.463831 GCGCCATGCATATGAAGAGAG 59.536 52.381 6.97 0.00 45.45 3.20
491 492 1.516161 GCGCCATGCATATGAAGAGA 58.484 50.000 6.97 0.00 45.45 3.10
502 503 1.660560 AAATGAGAGTGGCGCCATGC 61.661 55.000 35.23 26.47 45.38 4.06
505 506 0.391661 GAGAAATGAGAGTGGCGCCA 60.392 55.000 29.03 29.03 0.00 5.69
506 507 0.107945 AGAGAAATGAGAGTGGCGCC 60.108 55.000 22.73 22.73 0.00 6.53
507 508 1.285578 GAGAGAAATGAGAGTGGCGC 58.714 55.000 0.00 0.00 0.00 6.53
510 511 3.102972 TGGAGGAGAGAAATGAGAGTGG 58.897 50.000 0.00 0.00 0.00 4.00
511 512 3.430651 GCTGGAGGAGAGAAATGAGAGTG 60.431 52.174 0.00 0.00 0.00 3.51
512 513 2.765699 GCTGGAGGAGAGAAATGAGAGT 59.234 50.000 0.00 0.00 0.00 3.24
513 514 3.033184 AGCTGGAGGAGAGAAATGAGAG 58.967 50.000 0.00 0.00 0.00 3.20
514 515 2.765135 CAGCTGGAGGAGAGAAATGAGA 59.235 50.000 5.57 0.00 0.00 3.27
515 516 2.158928 CCAGCTGGAGGAGAGAAATGAG 60.159 54.545 29.88 0.00 37.39 2.90
516 517 1.836166 CCAGCTGGAGGAGAGAAATGA 59.164 52.381 29.88 0.00 37.39 2.57
518 519 1.211456 CCCAGCTGGAGGAGAGAAAT 58.789 55.000 34.91 0.00 37.39 2.17
519 520 0.117140 TCCCAGCTGGAGGAGAGAAA 59.883 55.000 34.91 3.52 38.61 2.52
521 522 0.616111 GTTCCCAGCTGGAGGAGAGA 60.616 60.000 34.91 18.36 46.24 3.10
523 524 1.613630 GGTTCCCAGCTGGAGGAGA 60.614 63.158 34.91 19.53 46.24 3.71
524 525 1.920325 TGGTTCCCAGCTGGAGGAG 60.920 63.158 34.91 17.34 46.24 3.69
527 528 1.302832 GTGTGGTTCCCAGCTGGAG 60.303 63.158 34.91 23.01 46.24 3.86
528 529 2.829384 GGTGTGGTTCCCAGCTGGA 61.829 63.158 34.91 17.23 43.18 3.86
529 530 2.282462 GGTGTGGTTCCCAGCTGG 60.282 66.667 26.87 26.87 32.34 4.85
530 531 1.898574 GTGGTGTGGTTCCCAGCTG 60.899 63.158 6.78 6.78 32.34 4.24
531 532 1.932156 TTGTGGTGTGGTTCCCAGCT 61.932 55.000 9.53 0.00 32.34 4.24
532 533 1.040339 TTTGTGGTGTGGTTCCCAGC 61.040 55.000 0.00 0.00 32.34 4.85
534 535 1.698506 GATTTGTGGTGTGGTTCCCA 58.301 50.000 0.00 0.00 0.00 4.37
535 536 0.966179 GGATTTGTGGTGTGGTTCCC 59.034 55.000 0.00 0.00 0.00 3.97
536 537 0.966179 GGGATTTGTGGTGTGGTTCC 59.034 55.000 0.00 0.00 0.00 3.62
537 538 1.613437 CTGGGATTTGTGGTGTGGTTC 59.387 52.381 0.00 0.00 0.00 3.62
538 539 1.703411 CTGGGATTTGTGGTGTGGTT 58.297 50.000 0.00 0.00 0.00 3.67
539 540 0.827507 GCTGGGATTTGTGGTGTGGT 60.828 55.000 0.00 0.00 0.00 4.16
540 541 0.827089 TGCTGGGATTTGTGGTGTGG 60.827 55.000 0.00 0.00 0.00 4.17
541 542 0.314935 GTGCTGGGATTTGTGGTGTG 59.685 55.000 0.00 0.00 0.00 3.82
543 544 1.067425 CATGTGCTGGGATTTGTGGTG 60.067 52.381 0.00 0.00 0.00 4.17
546 547 0.604073 TGCATGTGCTGGGATTTGTG 59.396 50.000 6.55 0.00 42.66 3.33
547 548 1.563924 ATGCATGTGCTGGGATTTGT 58.436 45.000 0.00 0.00 42.66 2.83
548 549 2.276201 CAATGCATGTGCTGGGATTTG 58.724 47.619 0.00 0.00 42.66 2.32
549 550 1.903860 ACAATGCATGTGCTGGGATTT 59.096 42.857 0.00 0.00 41.93 2.17
550 551 1.479323 GACAATGCATGTGCTGGGATT 59.521 47.619 0.00 0.00 44.12 3.01
551 552 1.108776 GACAATGCATGTGCTGGGAT 58.891 50.000 0.00 0.00 44.12 3.85
552 553 0.038599 AGACAATGCATGTGCTGGGA 59.961 50.000 0.00 0.00 44.12 4.37
553 554 0.892755 AAGACAATGCATGTGCTGGG 59.107 50.000 0.00 0.00 44.12 4.45
554 555 1.542472 TGAAGACAATGCATGTGCTGG 59.458 47.619 0.00 0.00 44.12 4.85
555 556 2.592194 GTGAAGACAATGCATGTGCTG 58.408 47.619 0.00 0.00 44.12 4.41
556 557 1.542915 GGTGAAGACAATGCATGTGCT 59.457 47.619 0.00 0.00 44.12 4.40
558 559 4.005650 AGTAGGTGAAGACAATGCATGTG 58.994 43.478 0.00 3.58 44.12 3.21
560 561 5.633830 AAAGTAGGTGAAGACAATGCATG 57.366 39.130 0.00 0.00 0.00 4.06
562 563 5.827797 AGAAAAAGTAGGTGAAGACAATGCA 59.172 36.000 0.00 0.00 0.00 3.96
563 564 6.319141 AGAAAAAGTAGGTGAAGACAATGC 57.681 37.500 0.00 0.00 0.00 3.56
564 565 6.712547 AGGAGAAAAAGTAGGTGAAGACAATG 59.287 38.462 0.00 0.00 0.00 2.82
565 566 6.842676 AGGAGAAAAAGTAGGTGAAGACAAT 58.157 36.000 0.00 0.00 0.00 2.71
566 567 6.248569 AGGAGAAAAAGTAGGTGAAGACAA 57.751 37.500 0.00 0.00 0.00 3.18
568 569 6.289064 TGAAGGAGAAAAAGTAGGTGAAGAC 58.711 40.000 0.00 0.00 0.00 3.01
569 570 6.494666 TGAAGGAGAAAAAGTAGGTGAAGA 57.505 37.500 0.00 0.00 0.00 2.87
570 571 7.445402 TGATTGAAGGAGAAAAAGTAGGTGAAG 59.555 37.037 0.00 0.00 0.00 3.02
571 572 7.287061 TGATTGAAGGAGAAAAAGTAGGTGAA 58.713 34.615 0.00 0.00 0.00 3.18
572 573 6.837312 TGATTGAAGGAGAAAAAGTAGGTGA 58.163 36.000 0.00 0.00 0.00 4.02
573 574 6.936900 TCTGATTGAAGGAGAAAAAGTAGGTG 59.063 38.462 0.00 0.00 0.00 4.00
574 575 7.079451 TCTGATTGAAGGAGAAAAAGTAGGT 57.921 36.000 0.00 0.00 0.00 3.08
576 577 9.883142 AGTATCTGATTGAAGGAGAAAAAGTAG 57.117 33.333 0.00 0.00 0.00 2.57
578 579 9.579932 AAAGTATCTGATTGAAGGAGAAAAAGT 57.420 29.630 0.00 0.00 0.00 2.66
579 580 9.837525 CAAAGTATCTGATTGAAGGAGAAAAAG 57.162 33.333 0.00 0.00 0.00 2.27
581 582 8.924511 ACAAAGTATCTGATTGAAGGAGAAAA 57.075 30.769 0.00 0.00 0.00 2.29
582 583 8.924511 AACAAAGTATCTGATTGAAGGAGAAA 57.075 30.769 0.00 0.00 0.00 2.52
595 596 9.888878 CATCCAATGCTAATAACAAAGTATCTG 57.111 33.333 0.00 0.00 0.00 2.90
596 597 9.851686 TCATCCAATGCTAATAACAAAGTATCT 57.148 29.630 0.00 0.00 0.00 1.98
597 598 9.884465 GTCATCCAATGCTAATAACAAAGTATC 57.116 33.333 0.00 0.00 0.00 2.24
598 599 9.632638 AGTCATCCAATGCTAATAACAAAGTAT 57.367 29.630 0.00 0.00 0.00 2.12
600 601 7.611467 TGAGTCATCCAATGCTAATAACAAAGT 59.389 33.333 0.00 0.00 0.00 2.66
601 602 7.912250 GTGAGTCATCCAATGCTAATAACAAAG 59.088 37.037 0.00 0.00 0.00 2.77
602 603 7.611467 AGTGAGTCATCCAATGCTAATAACAAA 59.389 33.333 0.00 0.00 0.00 2.83
603 604 7.112122 AGTGAGTCATCCAATGCTAATAACAA 58.888 34.615 0.00 0.00 0.00 2.83
606 607 6.126796 TGGAGTGAGTCATCCAATGCTAATAA 60.127 38.462 17.05 0.00 42.61 1.40
607 608 5.366477 TGGAGTGAGTCATCCAATGCTAATA 59.634 40.000 17.05 0.00 42.61 0.98
608 609 4.164796 TGGAGTGAGTCATCCAATGCTAAT 59.835 41.667 17.05 0.00 42.61 1.73
609 610 3.519107 TGGAGTGAGTCATCCAATGCTAA 59.481 43.478 17.05 0.00 42.61 3.09
610 611 3.106827 TGGAGTGAGTCATCCAATGCTA 58.893 45.455 17.05 0.00 42.61 3.49
611 612 1.911357 TGGAGTGAGTCATCCAATGCT 59.089 47.619 17.05 0.29 42.61 3.79
612 613 2.286872 CTGGAGTGAGTCATCCAATGC 58.713 52.381 18.82 2.71 44.82 3.56
613 614 2.286872 GCTGGAGTGAGTCATCCAATG 58.713 52.381 18.82 12.52 44.82 2.82
614 615 1.911357 TGCTGGAGTGAGTCATCCAAT 59.089 47.619 18.82 0.00 44.82 3.16
615 616 1.351076 TGCTGGAGTGAGTCATCCAA 58.649 50.000 18.82 8.09 44.82 3.53
616 617 1.483827 GATGCTGGAGTGAGTCATCCA 59.516 52.381 17.85 17.85 43.34 3.41
617 618 1.483827 TGATGCTGGAGTGAGTCATCC 59.516 52.381 12.25 12.25 34.29 3.51
619 620 2.504585 ACATGATGCTGGAGTGAGTCAT 59.495 45.455 0.00 0.00 0.00 3.06
620 621 1.904537 ACATGATGCTGGAGTGAGTCA 59.095 47.619 0.00 0.00 0.00 3.41
621 622 2.548875 GACATGATGCTGGAGTGAGTC 58.451 52.381 0.00 0.00 0.00 3.36
622 623 1.209019 GGACATGATGCTGGAGTGAGT 59.791 52.381 0.00 0.00 0.00 3.41
623 624 1.805495 CGGACATGATGCTGGAGTGAG 60.805 57.143 0.00 0.00 0.00 3.51
624 625 0.176449 CGGACATGATGCTGGAGTGA 59.824 55.000 0.00 0.00 0.00 3.41
626 627 0.107993 CACGGACATGATGCTGGAGT 60.108 55.000 0.00 0.00 0.00 3.85
629 630 1.091771 GTCCACGGACATGATGCTGG 61.092 60.000 11.43 0.00 44.02 4.85
630 631 1.091771 GGTCCACGGACATGATGCTG 61.092 60.000 17.72 0.00 46.20 4.41
631 632 1.221840 GGTCCACGGACATGATGCT 59.778 57.895 17.72 0.00 46.20 3.79
632 633 1.078497 TGGTCCACGGACATGATGC 60.078 57.895 17.72 0.19 46.20 3.91
633 634 2.767536 GTGGTCCACGGACATGATG 58.232 57.895 17.72 0.00 46.20 3.07
646 647 0.810823 TTTTGTGTCCGGACGTGGTC 60.811 55.000 28.70 16.18 0.00 4.02
647 648 0.392729 TTTTTGTGTCCGGACGTGGT 60.393 50.000 28.70 0.00 0.00 4.16
648 649 2.395651 TTTTTGTGTCCGGACGTGG 58.604 52.632 28.70 0.00 0.00 4.94
667 668 5.983720 CGAAAATGTCTTCGGTATATGTCCT 59.016 40.000 0.00 0.00 43.51 3.85
679 680 1.664151 CGCCTACCCGAAAATGTCTTC 59.336 52.381 0.00 0.00 0.00 2.87
701 702 4.591321 AAACTTCATTAGGGCATCTCCA 57.409 40.909 0.00 0.00 36.21 3.86
716 717 9.187455 GGAGATTCAGATCTATCGTAAAACTTC 57.813 37.037 0.00 0.00 42.66 3.01
717 718 8.919145 AGGAGATTCAGATCTATCGTAAAACTT 58.081 33.333 0.00 0.00 42.66 2.66
718 719 8.472007 AGGAGATTCAGATCTATCGTAAAACT 57.528 34.615 0.00 0.00 42.66 2.66
719 720 9.535878 AAAGGAGATTCAGATCTATCGTAAAAC 57.464 33.333 0.00 0.00 42.66 2.43
721 722 8.914011 TCAAAGGAGATTCAGATCTATCGTAAA 58.086 33.333 0.00 0.00 42.66 2.01
722 723 8.465273 TCAAAGGAGATTCAGATCTATCGTAA 57.535 34.615 0.00 0.00 42.66 3.18
723 724 8.465273 TTCAAAGGAGATTCAGATCTATCGTA 57.535 34.615 0.00 0.00 42.66 3.43
724 725 6.968263 TCAAAGGAGATTCAGATCTATCGT 57.032 37.500 0.00 0.00 42.66 3.73
725 726 8.830201 ATTTCAAAGGAGATTCAGATCTATCG 57.170 34.615 0.00 0.00 42.66 2.92
757 758 6.889198 TCTCTCGGATCACTAATTTGGATTT 58.111 36.000 0.00 0.00 0.00 2.17
758 759 6.485830 TCTCTCGGATCACTAATTTGGATT 57.514 37.500 0.00 0.00 0.00 3.01
759 760 5.510520 GCTCTCTCGGATCACTAATTTGGAT 60.511 44.000 0.00 0.00 0.00 3.41
760 761 4.202161 GCTCTCTCGGATCACTAATTTGGA 60.202 45.833 0.00 0.00 0.00 3.53
761 762 4.054671 GCTCTCTCGGATCACTAATTTGG 58.945 47.826 0.00 0.00 0.00 3.28
762 763 4.744137 CAGCTCTCTCGGATCACTAATTTG 59.256 45.833 0.00 0.00 0.00 2.32
767 768 2.171659 AGTCAGCTCTCTCGGATCACTA 59.828 50.000 0.00 0.00 0.00 2.74
962 9512 2.866762 GCGTGCTTACTGCTAATAGCTT 59.133 45.455 13.88 3.19 42.97 3.74
1011 9561 0.603065 GGACATTGCCCTTGTTGACC 59.397 55.000 0.00 0.00 0.00 4.02
1332 9905 0.988832 TAAAGTCCAGGTCCGCCATT 59.011 50.000 0.00 0.00 37.19 3.16
1374 9959 1.883084 GTACGGCAGCGGGATCTTG 60.883 63.158 4.79 0.00 0.00 3.02
1558 13920 3.458163 GGAGCGGTCATGGGTCGA 61.458 66.667 17.59 0.00 32.85 4.20
1561 13923 3.402681 CAGGGAGCGGTCATGGGT 61.403 66.667 17.59 0.00 0.00 4.51
1650 14012 0.739462 GGACGTTGACCATGCGATCA 60.739 55.000 0.00 0.00 0.00 2.92
1683 14045 2.982130 AAGCGATGGACGGAGCTT 59.018 55.556 0.00 0.00 44.08 3.74
1926 14296 1.425267 CGAATATGGACGCGTTGCCA 61.425 55.000 20.47 20.47 38.78 4.92
1941 14311 2.848691 CCGTCCTCTCCTAGTACGAAT 58.151 52.381 0.00 0.00 35.66 3.34
1950 14320 4.361971 TCCACGCCGTCCTCTCCT 62.362 66.667 0.00 0.00 0.00 3.69
2073 14460 2.126142 TCCATGTAGGTGGCCCCA 59.874 61.111 12.24 0.00 39.19 4.96
2076 14463 2.513897 GCGTCCATGTAGGTGGCC 60.514 66.667 0.00 0.00 39.19 5.36
2210 14598 2.666596 GAACCCTGAGCATAGCCCCG 62.667 65.000 0.00 0.00 0.00 5.73
2271 14659 2.179547 CCACACGCTTGCACTGACA 61.180 57.895 0.00 0.00 0.00 3.58
2339 14727 2.433318 GGTGCTCGGCTGTGACTC 60.433 66.667 0.00 0.00 0.00 3.36
2521 15095 0.468226 ACCAACTCGGCTTCAGTGAA 59.532 50.000 5.25 5.25 39.03 3.18
2559 15156 3.858129 GCATGAGGGAACACAACACATTG 60.858 47.826 0.00 0.00 41.98 2.82
2560 15157 2.297033 GCATGAGGGAACACAACACATT 59.703 45.455 0.00 0.00 33.61 2.71
2561 15158 1.888512 GCATGAGGGAACACAACACAT 59.111 47.619 0.00 0.00 33.61 3.21
2562 15159 1.317613 GCATGAGGGAACACAACACA 58.682 50.000 0.00 0.00 33.61 3.72
2563 15160 1.001378 GTGCATGAGGGAACACAACAC 60.001 52.381 0.00 0.00 35.88 3.32
2564 15161 1.317613 GTGCATGAGGGAACACAACA 58.682 50.000 0.00 0.00 33.61 3.33
2565 15162 1.317613 TGTGCATGAGGGAACACAAC 58.682 50.000 0.00 0.00 39.91 3.32
2566 15163 3.817187 TGTGCATGAGGGAACACAA 57.183 47.368 0.00 0.00 39.91 3.33
2567 15164 1.887854 CATTGTGCATGAGGGAACACA 59.112 47.619 0.00 0.00 41.04 3.72
2568 15165 1.888512 ACATTGTGCATGAGGGAACAC 59.111 47.619 0.00 0.00 36.24 3.32
2569 15166 1.887854 CACATTGTGCATGAGGGAACA 59.112 47.619 3.43 0.00 36.24 3.18
2570 15167 1.888512 ACACATTGTGCATGAGGGAAC 59.111 47.619 16.62 0.00 36.98 3.62
2571 15168 2.291209 ACACATTGTGCATGAGGGAA 57.709 45.000 16.62 0.00 36.98 3.97
2572 15169 1.887854 CAACACATTGTGCATGAGGGA 59.112 47.619 16.62 0.00 36.98 4.20
2573 15170 2.357327 CAACACATTGTGCATGAGGG 57.643 50.000 16.62 0.00 36.98 4.30
2597 15194 5.525378 ACAAAAACAGCAACACAAACAAGAA 59.475 32.000 0.00 0.00 0.00 2.52
2612 15209 6.042143 AGGAGCACAACAATAACAAAAACAG 58.958 36.000 0.00 0.00 0.00 3.16
2617 15229 3.880490 ACGAGGAGCACAACAATAACAAA 59.120 39.130 0.00 0.00 0.00 2.83
2623 15241 1.800805 CTCACGAGGAGCACAACAAT 58.199 50.000 0.00 0.00 36.69 2.71
2654 15272 0.459489 AGCACCGCAACAACAACAAT 59.541 45.000 0.00 0.00 0.00 2.71
2667 15285 1.161843 AAATACCAAACCGAGCACCG 58.838 50.000 0.00 0.00 38.18 4.94
2668 15286 2.554893 TCAAAATACCAAACCGAGCACC 59.445 45.455 0.00 0.00 0.00 5.01
2684 15314 7.499321 AAAATCTTGAGCAAATGCATCAAAA 57.501 28.000 8.28 2.73 45.16 2.44
2698 15328 5.292101 CGCTACCCACTAGAAAAATCTTGAG 59.708 44.000 0.00 0.00 0.00 3.02
2759 15389 3.274095 AGGAGCATGAGTTTAGGAAGC 57.726 47.619 0.00 0.00 0.00 3.86
2796 15426 0.395311 AGCAGGGCTCCAACATCATG 60.395 55.000 0.00 0.00 30.62 3.07
2799 15429 0.543749 ACTAGCAGGGCTCCAACATC 59.456 55.000 0.00 0.00 40.44 3.06
2809 15439 3.084786 CCCTCTTTGAAAACTAGCAGGG 58.915 50.000 0.00 0.00 33.59 4.45
2810 15440 4.006319 CTCCCTCTTTGAAAACTAGCAGG 58.994 47.826 0.00 0.00 0.00 4.85
2886 15520 2.948315 GAGGTGCCATTCTCAAATCTCC 59.052 50.000 0.00 0.00 0.00 3.71
2929 15563 3.495331 TCTAAACCTGCAGATGCCAAAA 58.505 40.909 17.39 0.00 41.18 2.44
2938 15572 2.715046 TCAGCCATTCTAAACCTGCAG 58.285 47.619 6.78 6.78 0.00 4.41
2957 15591 7.627300 GCACTTTGAATTGGAGAGGAAAGTATC 60.627 40.741 0.00 0.00 33.10 2.24
3032 15669 7.255569 TGAGACGTATCGATGACTTACAATTT 58.744 34.615 8.54 0.00 0.00 1.82
3046 15683 9.674824 AATTATAGTTACCTTTGAGACGTATCG 57.325 33.333 5.61 0.00 0.00 2.92
3279 23618 0.684153 CCCAACGGCCCATCTTTGAT 60.684 55.000 0.00 0.00 0.00 2.57
3280 23619 1.304052 CCCAACGGCCCATCTTTGA 60.304 57.895 0.00 0.00 0.00 2.69
3295 23634 2.349755 GGCGACTTGTTAGCCCCA 59.650 61.111 9.11 0.00 44.80 4.96
3326 23665 1.607225 AATGGCATTCCCCAGACCTA 58.393 50.000 6.96 0.00 38.50 3.08
3342 23681 1.833934 GGCCCCACATGCCCTAATG 60.834 63.158 0.00 0.00 43.33 1.90


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.