Multiple sequence alignment - TraesCS4A01G448800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G448800 chr4A 100.000 3089 0 0 1 3089 715097019 715100107 0.000000e+00 5705
1 TraesCS4A01G448800 chr4A 92.354 1831 132 7 1266 3089 715006592 715008421 0.000000e+00 2599
2 TraesCS4A01G448800 chr4A 91.088 1369 114 6 1242 2603 714993320 714994687 0.000000e+00 1845
3 TraesCS4A01G448800 chr4A 78.782 1659 319 31 1447 3087 714430939 714432582 0.000000e+00 1083
4 TraesCS4A01G448800 chr4A 81.878 607 106 4 2486 3089 714946614 714947219 2.750000e-140 508
5 TraesCS4A01G448800 chr4A 89.610 231 24 0 893 1123 714992340 714992570 8.380000e-76 294
6 TraesCS4A01G448800 chrUn 92.674 1829 127 6 1266 3089 89851333 89853159 0.000000e+00 2628
7 TraesCS4A01G448800 chrUn 91.855 221 18 0 925 1145 89851094 89851314 2.990000e-80 309
8 TraesCS4A01G448800 chrUn 94.805 77 2 1 396 472 89850683 89850757 5.410000e-23 119
9 TraesCS4A01G448800 chr7A 92.075 1855 139 6 1242 3089 18432123 18433976 0.000000e+00 2604
10 TraesCS4A01G448800 chr7A 91.978 1820 136 7 1277 3089 17802555 17800739 0.000000e+00 2543
11 TraesCS4A01G448800 chr7A 83.577 1778 257 15 1318 3081 17467439 17465683 0.000000e+00 1633
12 TraesCS4A01G448800 chr7A 78.944 1648 313 27 1459 3089 17686426 17684796 0.000000e+00 1090
13 TraesCS4A01G448800 chr7A 78.103 1571 314 26 1519 3074 17595709 17594154 0.000000e+00 968
14 TraesCS4A01G448800 chr7A 90.870 230 21 0 893 1122 18431143 18431372 2.990000e-80 309
15 TraesCS4A01G448800 chr7A 90.991 222 19 1 924 1145 17802812 17802592 6.480000e-77 298
16 TraesCS4A01G448800 chr7A 96.364 110 4 0 1135 1244 332425350 332425459 6.800000e-42 182
17 TraesCS4A01G448800 chr7A 85.827 127 18 0 993 1119 18047480 18047354 5.370000e-28 135
18 TraesCS4A01G448800 chr7D 92.011 1840 130 13 1267 3089 18108200 18106361 0.000000e+00 2567
19 TraesCS4A01G448800 chr7D 88.688 221 25 0 925 1145 18108440 18108220 1.410000e-68 270
20 TraesCS4A01G448800 chr7D 94.667 75 4 0 398 472 18108851 18108777 1.950000e-22 117
21 TraesCS4A01G448800 chr5D 90.230 174 16 1 469 641 24965132 24964959 3.100000e-55 226
22 TraesCS4A01G448800 chr5D 89.773 176 18 0 466 641 542971117 542970942 3.100000e-55 226
23 TraesCS4A01G448800 chr5D 88.827 179 18 2 471 647 69953710 69953532 5.190000e-53 219
24 TraesCS4A01G448800 chr3A 90.230 174 15 2 471 643 585605802 585605630 3.100000e-55 226
25 TraesCS4A01G448800 chr3A 95.536 112 2 2 1134 1244 680805512 680805621 3.170000e-40 176
26 TraesCS4A01G448800 chr6B 89.773 176 16 2 460 635 614578767 614578594 1.110000e-54 224
27 TraesCS4A01G448800 chr4B 90.173 173 15 2 470 642 592024399 592024229 1.110000e-54 224
28 TraesCS4A01G448800 chr2D 90.116 172 17 0 464 635 647970086 647970257 1.110000e-54 224
29 TraesCS4A01G448800 chr7B 88.108 185 17 5 456 638 697371378 697371559 6.710000e-52 215
30 TraesCS4A01G448800 chr1B 88.398 181 18 3 461 639 480970204 480970383 6.710000e-52 215
31 TraesCS4A01G448800 chr1B 95.536 112 3 2 1135 1244 43317206 43317317 8.800000e-41 178
32 TraesCS4A01G448800 chr1B 95.495 111 4 1 1135 1244 666817549 666817659 3.170000e-40 176
33 TraesCS4A01G448800 chr2A 98.131 107 1 1 1138 1244 500032545 500032650 5.260000e-43 185
34 TraesCS4A01G448800 chr5B 98.058 103 2 0 1142 1244 358022082 358022184 2.450000e-41 180
35 TraesCS4A01G448800 chr5B 95.495 111 4 1 1135 1244 512583666 512583776 3.170000e-40 176
36 TraesCS4A01G448800 chr5A 97.143 105 3 0 1140 1244 104599176 104599280 8.800000e-41 178
37 TraesCS4A01G448800 chr3B 97.170 106 1 2 1147 1252 126030448 126030345 8.800000e-41 178


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G448800 chr4A 715097019 715100107 3088 False 5705.000000 5705 100.000000 1 3089 1 chr4A.!!$F4 3088
1 TraesCS4A01G448800 chr4A 715006592 715008421 1829 False 2599.000000 2599 92.354000 1266 3089 1 chr4A.!!$F3 1823
2 TraesCS4A01G448800 chr4A 714430939 714432582 1643 False 1083.000000 1083 78.782000 1447 3087 1 chr4A.!!$F1 1640
3 TraesCS4A01G448800 chr4A 714992340 714994687 2347 False 1069.500000 1845 90.349000 893 2603 2 chr4A.!!$F5 1710
4 TraesCS4A01G448800 chr4A 714946614 714947219 605 False 508.000000 508 81.878000 2486 3089 1 chr4A.!!$F2 603
5 TraesCS4A01G448800 chrUn 89850683 89853159 2476 False 1018.666667 2628 93.111333 396 3089 3 chrUn.!!$F1 2693
6 TraesCS4A01G448800 chr7A 17465683 17467439 1756 True 1633.000000 1633 83.577000 1318 3081 1 chr7A.!!$R1 1763
7 TraesCS4A01G448800 chr7A 18431143 18433976 2833 False 1456.500000 2604 91.472500 893 3089 2 chr7A.!!$F2 2196
8 TraesCS4A01G448800 chr7A 17800739 17802812 2073 True 1420.500000 2543 91.484500 924 3089 2 chr7A.!!$R5 2165
9 TraesCS4A01G448800 chr7A 17684796 17686426 1630 True 1090.000000 1090 78.944000 1459 3089 1 chr7A.!!$R3 1630
10 TraesCS4A01G448800 chr7A 17594154 17595709 1555 True 968.000000 968 78.103000 1519 3074 1 chr7A.!!$R2 1555
11 TraesCS4A01G448800 chr7D 18106361 18108851 2490 True 984.666667 2567 91.788667 398 3089 3 chr7D.!!$R1 2691

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
159 160 0.039180 TCCTAGCGTTCTGGAGTCCA 59.961 55.0 12.4 12.4 0.00 4.02 F
876 967 0.107831 TTTCTTGCCGCACCTAGTGT 59.892 50.0 0.0 0.0 35.75 3.55 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1194 2015 0.039180 AAAATGGTCGGACCCTTCCC 59.961 55.0 23.81 0.0 38.99 3.97 R
2281 3146 0.676466 TTGCTAAGCCCACATCACGG 60.676 55.0 0.00 0.0 0.00 4.94 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.072088 CTGGCGTCGCGGTTTCAC 62.072 66.667 11.75 0.00 0.00 3.18
22 23 4.595538 TGGCGTCGCGGTTTCACT 62.596 61.111 11.75 0.00 0.00 3.41
23 24 3.343421 GGCGTCGCGGTTTCACTT 61.343 61.111 11.75 0.00 0.00 3.16
24 25 2.629763 GCGTCGCGGTTTCACTTT 59.370 55.556 6.13 0.00 0.00 2.66
25 26 1.010462 GCGTCGCGGTTTCACTTTT 60.010 52.632 6.13 0.00 0.00 2.27
26 27 1.259544 GCGTCGCGGTTTCACTTTTG 61.260 55.000 6.13 0.00 0.00 2.44
27 28 0.656205 CGTCGCGGTTTCACTTTTGG 60.656 55.000 6.13 0.00 0.00 3.28
28 29 0.933047 GTCGCGGTTTCACTTTTGGC 60.933 55.000 6.13 0.00 0.00 4.52
29 30 2.008697 CGCGGTTTCACTTTTGGCG 61.009 57.895 0.00 0.00 36.05 5.69
30 31 1.065109 GCGGTTTCACTTTTGGCGT 59.935 52.632 0.00 0.00 0.00 5.68
31 32 0.526739 GCGGTTTCACTTTTGGCGTT 60.527 50.000 0.00 0.00 0.00 4.84
32 33 1.472990 CGGTTTCACTTTTGGCGTTC 58.527 50.000 0.00 0.00 0.00 3.95
33 34 1.202200 CGGTTTCACTTTTGGCGTTCA 60.202 47.619 0.00 0.00 0.00 3.18
34 35 2.459934 GGTTTCACTTTTGGCGTTCAG 58.540 47.619 0.00 0.00 0.00 3.02
35 36 2.098443 GGTTTCACTTTTGGCGTTCAGA 59.902 45.455 0.00 0.00 0.00 3.27
36 37 3.428316 GGTTTCACTTTTGGCGTTCAGAA 60.428 43.478 0.00 0.00 0.00 3.02
37 38 4.170256 GTTTCACTTTTGGCGTTCAGAAA 58.830 39.130 0.00 0.00 0.00 2.52
38 39 3.414549 TCACTTTTGGCGTTCAGAAAC 57.585 42.857 0.00 0.00 0.00 2.78
39 40 2.750166 TCACTTTTGGCGTTCAGAAACA 59.250 40.909 0.00 0.00 34.93 2.83
40 41 3.108144 CACTTTTGGCGTTCAGAAACAG 58.892 45.455 0.00 0.00 34.93 3.16
41 42 2.752903 ACTTTTGGCGTTCAGAAACAGT 59.247 40.909 0.00 0.00 34.93 3.55
42 43 3.192633 ACTTTTGGCGTTCAGAAACAGTT 59.807 39.130 0.00 0.00 34.93 3.16
43 44 2.842208 TTGGCGTTCAGAAACAGTTG 57.158 45.000 0.00 0.00 34.93 3.16
44 45 1.021202 TGGCGTTCAGAAACAGTTGG 58.979 50.000 0.00 0.00 34.93 3.77
45 46 1.305201 GGCGTTCAGAAACAGTTGGA 58.695 50.000 0.00 0.00 34.93 3.53
46 47 1.264288 GGCGTTCAGAAACAGTTGGAG 59.736 52.381 0.00 0.00 34.93 3.86
47 48 1.264288 GCGTTCAGAAACAGTTGGAGG 59.736 52.381 0.00 0.00 34.93 4.30
48 49 1.873591 CGTTCAGAAACAGTTGGAGGG 59.126 52.381 0.00 0.00 34.93 4.30
49 50 1.609072 GTTCAGAAACAGTTGGAGGGC 59.391 52.381 0.00 0.00 35.36 5.19
50 51 0.250295 TCAGAAACAGTTGGAGGGCG 60.250 55.000 0.00 0.00 0.00 6.13
51 52 0.250295 CAGAAACAGTTGGAGGGCGA 60.250 55.000 0.00 0.00 0.00 5.54
52 53 0.472471 AGAAACAGTTGGAGGGCGAA 59.528 50.000 0.00 0.00 0.00 4.70
53 54 0.875059 GAAACAGTTGGAGGGCGAAG 59.125 55.000 0.00 0.00 0.00 3.79
54 55 0.537371 AAACAGTTGGAGGGCGAAGG 60.537 55.000 0.00 0.00 0.00 3.46
55 56 2.045926 CAGTTGGAGGGCGAAGGG 60.046 66.667 0.00 0.00 0.00 3.95
56 57 3.330720 AGTTGGAGGGCGAAGGGG 61.331 66.667 0.00 0.00 0.00 4.79
57 58 3.327404 GTTGGAGGGCGAAGGGGA 61.327 66.667 0.00 0.00 0.00 4.81
58 59 2.530661 TTGGAGGGCGAAGGGGAA 60.531 61.111 0.00 0.00 0.00 3.97
59 60 1.928567 TTGGAGGGCGAAGGGGAAT 60.929 57.895 0.00 0.00 0.00 3.01
60 61 1.506028 TTGGAGGGCGAAGGGGAATT 61.506 55.000 0.00 0.00 0.00 2.17
61 62 1.306633 GGAGGGCGAAGGGGAATTT 59.693 57.895 0.00 0.00 0.00 1.82
62 63 1.037579 GGAGGGCGAAGGGGAATTTG 61.038 60.000 0.00 0.00 0.00 2.32
63 64 1.000359 AGGGCGAAGGGGAATTTGG 60.000 57.895 0.00 0.00 0.00 3.28
64 65 1.304962 GGGCGAAGGGGAATTTGGT 60.305 57.895 0.00 0.00 0.00 3.67
65 66 0.902984 GGGCGAAGGGGAATTTGGTT 60.903 55.000 0.00 0.00 0.00 3.67
66 67 0.246360 GGCGAAGGGGAATTTGGTTG 59.754 55.000 0.00 0.00 0.00 3.77
67 68 0.246360 GCGAAGGGGAATTTGGTTGG 59.754 55.000 0.00 0.00 0.00 3.77
68 69 0.894835 CGAAGGGGAATTTGGTTGGG 59.105 55.000 0.00 0.00 0.00 4.12
69 70 0.613260 GAAGGGGAATTTGGTTGGGC 59.387 55.000 0.00 0.00 0.00 5.36
70 71 0.840288 AAGGGGAATTTGGTTGGGCC 60.840 55.000 0.00 0.00 37.90 5.80
71 72 1.229496 GGGGAATTTGGTTGGGCCT 60.229 57.895 4.53 0.00 38.35 5.19
72 73 0.041982 GGGGAATTTGGTTGGGCCTA 59.958 55.000 4.53 0.00 38.35 3.93
73 74 1.191535 GGGAATTTGGTTGGGCCTAC 58.808 55.000 9.80 9.80 38.35 3.18
74 75 1.551329 GGGAATTTGGTTGGGCCTACA 60.551 52.381 19.57 5.89 38.35 2.74
75 76 1.548719 GGAATTTGGTTGGGCCTACAC 59.451 52.381 19.57 9.59 38.35 2.90
76 77 1.548719 GAATTTGGTTGGGCCTACACC 59.451 52.381 19.57 15.41 38.35 4.16
86 87 3.797353 CCTACACCCTGCCGGCAT 61.797 66.667 32.87 18.04 33.26 4.40
87 88 2.514592 CTACACCCTGCCGGCATG 60.515 66.667 32.87 27.53 33.26 4.06
88 89 4.108299 TACACCCTGCCGGCATGG 62.108 66.667 39.49 39.49 42.50 3.66
97 98 3.513225 CCGGCATGGGCAAGTTAG 58.487 61.111 0.00 0.00 43.71 2.34
98 99 1.378514 CCGGCATGGGCAAGTTAGT 60.379 57.895 0.00 0.00 43.71 2.24
99 100 1.656818 CCGGCATGGGCAAGTTAGTG 61.657 60.000 0.00 0.00 43.71 2.74
100 101 0.960364 CGGCATGGGCAAGTTAGTGT 60.960 55.000 0.00 0.00 43.71 3.55
101 102 0.527565 GGCATGGGCAAGTTAGTGTG 59.472 55.000 0.00 0.00 43.71 3.82
102 103 0.109132 GCATGGGCAAGTTAGTGTGC 60.109 55.000 0.00 0.00 40.72 4.57
107 108 3.479255 GCAAGTTAGTGTGCCAAGC 57.521 52.632 0.00 0.00 34.58 4.01
108 109 0.385974 GCAAGTTAGTGTGCCAAGCG 60.386 55.000 0.00 0.00 34.58 4.68
109 110 0.944386 CAAGTTAGTGTGCCAAGCGT 59.056 50.000 0.00 0.00 0.00 5.07
110 111 1.069906 CAAGTTAGTGTGCCAAGCGTC 60.070 52.381 0.00 0.00 0.00 5.19
111 112 0.602905 AGTTAGTGTGCCAAGCGTCC 60.603 55.000 0.00 0.00 0.00 4.79
112 113 1.302192 TTAGTGTGCCAAGCGTCCC 60.302 57.895 0.00 0.00 0.00 4.46
113 114 3.583276 TAGTGTGCCAAGCGTCCCG 62.583 63.158 0.00 0.00 0.00 5.14
124 125 2.125310 CGTCCCGCCAATGTGCTA 60.125 61.111 0.00 0.00 0.00 3.49
125 126 1.743623 CGTCCCGCCAATGTGCTAA 60.744 57.895 0.00 0.00 0.00 3.09
126 127 1.705337 CGTCCCGCCAATGTGCTAAG 61.705 60.000 0.00 0.00 0.00 2.18
127 128 1.077787 TCCCGCCAATGTGCTAAGG 60.078 57.895 0.00 0.00 0.00 2.69
128 129 1.378514 CCCGCCAATGTGCTAAGGT 60.379 57.895 0.00 0.00 0.00 3.50
129 130 0.107410 CCCGCCAATGTGCTAAGGTA 60.107 55.000 0.00 0.00 0.00 3.08
130 131 1.299541 CCGCCAATGTGCTAAGGTAG 58.700 55.000 0.00 0.00 0.00 3.18
146 147 4.674281 AGGTAGCACAAACTATCCTAGC 57.326 45.455 0.00 0.00 0.00 3.42
147 148 3.068307 AGGTAGCACAAACTATCCTAGCG 59.932 47.826 0.00 0.00 33.19 4.26
148 149 3.181478 GGTAGCACAAACTATCCTAGCGT 60.181 47.826 0.00 0.00 0.00 5.07
149 150 3.611766 AGCACAAACTATCCTAGCGTT 57.388 42.857 0.00 0.00 0.00 4.84
150 151 3.522553 AGCACAAACTATCCTAGCGTTC 58.477 45.455 0.00 0.00 0.00 3.95
151 152 3.195825 AGCACAAACTATCCTAGCGTTCT 59.804 43.478 0.00 0.00 0.00 3.01
152 153 3.307242 GCACAAACTATCCTAGCGTTCTG 59.693 47.826 0.00 0.00 0.00 3.02
153 154 3.865745 CACAAACTATCCTAGCGTTCTGG 59.134 47.826 0.00 0.00 0.00 3.86
154 155 3.767673 ACAAACTATCCTAGCGTTCTGGA 59.232 43.478 0.00 0.00 0.00 3.86
155 156 4.142138 ACAAACTATCCTAGCGTTCTGGAG 60.142 45.833 1.07 0.00 32.95 3.86
156 157 3.300239 ACTATCCTAGCGTTCTGGAGT 57.700 47.619 1.07 0.00 32.95 3.85
157 158 3.215975 ACTATCCTAGCGTTCTGGAGTC 58.784 50.000 1.07 0.00 32.95 3.36
158 159 1.404843 ATCCTAGCGTTCTGGAGTCC 58.595 55.000 0.73 0.73 32.95 3.85
159 160 0.039180 TCCTAGCGTTCTGGAGTCCA 59.961 55.000 12.40 12.40 0.00 4.02
197 198 7.531857 TTTTCATTTTGTATACCAAGCAGGA 57.468 32.000 0.00 0.00 41.22 3.86
198 199 6.509418 TTCATTTTGTATACCAAGCAGGAC 57.491 37.500 0.00 0.00 41.22 3.85
199 200 4.634004 TCATTTTGTATACCAAGCAGGACG 59.366 41.667 0.00 0.00 41.22 4.79
200 201 2.684001 TTGTATACCAAGCAGGACGG 57.316 50.000 0.00 0.00 41.22 4.79
201 202 0.828022 TGTATACCAAGCAGGACGGG 59.172 55.000 0.00 0.00 41.22 5.28
202 203 0.828677 GTATACCAAGCAGGACGGGT 59.171 55.000 1.83 0.00 41.22 5.28
203 204 1.208776 GTATACCAAGCAGGACGGGTT 59.791 52.381 1.83 0.00 41.22 4.11
204 205 0.252197 ATACCAAGCAGGACGGGTTC 59.748 55.000 1.83 0.00 41.22 3.62
205 206 2.162338 TACCAAGCAGGACGGGTTCG 62.162 60.000 1.83 0.00 41.22 3.95
206 207 3.423154 CAAGCAGGACGGGTTCGC 61.423 66.667 0.00 0.00 40.63 4.70
226 227 4.537433 GCCGCTCTGCACCCCTAG 62.537 72.222 0.00 0.00 0.00 3.02
227 228 3.077556 CCGCTCTGCACCCCTAGT 61.078 66.667 0.00 0.00 0.00 2.57
235 236 3.820425 CACCCCTAGTGCCAAGGA 58.180 61.111 0.00 0.00 40.28 3.36
236 237 2.311287 CACCCCTAGTGCCAAGGAT 58.689 57.895 0.00 0.00 40.28 3.24
237 238 0.181350 CACCCCTAGTGCCAAGGATC 59.819 60.000 0.00 0.00 40.28 3.36
238 239 0.988678 ACCCCTAGTGCCAAGGATCC 60.989 60.000 2.48 2.48 36.08 3.36
239 240 0.988145 CCCCTAGTGCCAAGGATCCA 60.988 60.000 15.82 0.00 36.08 3.41
240 241 0.181350 CCCTAGTGCCAAGGATCCAC 59.819 60.000 15.82 2.39 36.08 4.02
241 242 0.179073 CCTAGTGCCAAGGATCCACG 60.179 60.000 15.82 3.77 36.08 4.94
242 243 0.811616 CTAGTGCCAAGGATCCACGC 60.812 60.000 15.82 12.41 34.79 5.34
243 244 2.252072 TAGTGCCAAGGATCCACGCC 62.252 60.000 15.82 6.35 34.79 5.68
244 245 4.424711 TGCCAAGGATCCACGCCC 62.425 66.667 15.82 0.00 0.00 6.13
246 247 3.781307 CCAAGGATCCACGCCCGA 61.781 66.667 15.82 0.00 0.00 5.14
247 248 2.202932 CAAGGATCCACGCCCGAG 60.203 66.667 15.82 0.00 0.00 4.63
248 249 2.363795 AAGGATCCACGCCCGAGA 60.364 61.111 15.82 0.00 0.00 4.04
249 250 2.427245 AAGGATCCACGCCCGAGAG 61.427 63.158 15.82 0.00 0.00 3.20
262 263 1.657556 CGAGAGGCAGCCTAGTAGC 59.342 63.158 16.16 0.46 31.76 3.58
263 264 0.821711 CGAGAGGCAGCCTAGTAGCT 60.822 60.000 16.16 6.62 46.45 3.32
264 265 0.958822 GAGAGGCAGCCTAGTAGCTC 59.041 60.000 16.16 12.74 42.61 4.09
265 266 0.821711 AGAGGCAGCCTAGTAGCTCG 60.822 60.000 16.16 0.00 42.61 5.03
266 267 0.820074 GAGGCAGCCTAGTAGCTCGA 60.820 60.000 16.16 0.00 42.61 4.04
267 268 0.178975 AGGCAGCCTAGTAGCTCGAT 60.179 55.000 14.18 0.00 42.61 3.59
268 269 0.676736 GGCAGCCTAGTAGCTCGATT 59.323 55.000 3.29 0.00 42.61 3.34
269 270 1.069358 GGCAGCCTAGTAGCTCGATTT 59.931 52.381 3.29 0.00 42.61 2.17
270 271 2.399448 GCAGCCTAGTAGCTCGATTTC 58.601 52.381 0.00 0.00 42.61 2.17
271 272 2.035321 GCAGCCTAGTAGCTCGATTTCT 59.965 50.000 0.00 0.00 42.61 2.52
272 273 3.855524 GCAGCCTAGTAGCTCGATTTCTC 60.856 52.174 0.00 0.00 42.61 2.87
273 274 3.316588 CAGCCTAGTAGCTCGATTTCTCA 59.683 47.826 0.00 0.00 42.61 3.27
274 275 4.022416 CAGCCTAGTAGCTCGATTTCTCAT 60.022 45.833 0.00 0.00 42.61 2.90
275 276 4.586841 AGCCTAGTAGCTCGATTTCTCATT 59.413 41.667 0.00 0.00 39.48 2.57
276 277 5.069781 AGCCTAGTAGCTCGATTTCTCATTT 59.930 40.000 0.00 0.00 39.48 2.32
277 278 5.755861 GCCTAGTAGCTCGATTTCTCATTTT 59.244 40.000 0.00 0.00 0.00 1.82
278 279 6.292596 GCCTAGTAGCTCGATTTCTCATTTTG 60.293 42.308 0.00 0.00 0.00 2.44
279 280 6.758886 CCTAGTAGCTCGATTTCTCATTTTGT 59.241 38.462 0.00 0.00 0.00 2.83
280 281 7.278868 CCTAGTAGCTCGATTTCTCATTTTGTT 59.721 37.037 0.00 0.00 0.00 2.83
281 282 7.440523 AGTAGCTCGATTTCTCATTTTGTTT 57.559 32.000 0.00 0.00 0.00 2.83
282 283 7.522374 AGTAGCTCGATTTCTCATTTTGTTTC 58.478 34.615 0.00 0.00 0.00 2.78
283 284 5.385617 AGCTCGATTTCTCATTTTGTTTCG 58.614 37.500 0.00 0.00 0.00 3.46
284 285 5.049405 AGCTCGATTTCTCATTTTGTTTCGT 60.049 36.000 0.00 0.00 0.00 3.85
285 286 5.058492 GCTCGATTTCTCATTTTGTTTCGTG 59.942 40.000 0.00 0.00 0.00 4.35
286 287 6.293713 TCGATTTCTCATTTTGTTTCGTGA 57.706 33.333 0.00 0.00 0.00 4.35
287 288 6.362686 TCGATTTCTCATTTTGTTTCGTGAG 58.637 36.000 0.00 0.00 39.47 3.51
288 289 6.201997 TCGATTTCTCATTTTGTTTCGTGAGA 59.798 34.615 0.16 0.16 43.73 3.27
289 290 7.017645 CGATTTCTCATTTTGTTTCGTGAGAT 58.982 34.615 4.93 0.00 44.50 2.75
290 291 7.006831 CGATTTCTCATTTTGTTTCGTGAGATG 59.993 37.037 4.93 0.00 44.50 2.90
291 292 5.034554 TCTCATTTTGTTTCGTGAGATGC 57.965 39.130 0.16 0.00 41.40 3.91
292 293 4.514816 TCTCATTTTGTTTCGTGAGATGCA 59.485 37.500 0.00 0.00 41.40 3.96
293 294 4.786507 TCATTTTGTTTCGTGAGATGCAG 58.213 39.130 0.00 0.00 41.60 4.41
294 295 3.624326 TTTTGTTTCGTGAGATGCAGG 57.376 42.857 0.00 0.00 41.60 4.85
295 296 2.254546 TTGTTTCGTGAGATGCAGGT 57.745 45.000 0.00 0.00 41.60 4.00
296 297 1.795768 TGTTTCGTGAGATGCAGGTC 58.204 50.000 0.00 0.00 41.60 3.85
297 298 1.069978 TGTTTCGTGAGATGCAGGTCA 59.930 47.619 0.00 0.00 41.60 4.02
298 299 2.143122 GTTTCGTGAGATGCAGGTCAA 58.857 47.619 2.45 0.00 41.60 3.18
299 300 2.542020 TTCGTGAGATGCAGGTCAAA 57.458 45.000 2.45 0.00 41.60 2.69
300 301 2.768253 TCGTGAGATGCAGGTCAAAT 57.232 45.000 2.45 0.00 34.14 2.32
301 302 3.057969 TCGTGAGATGCAGGTCAAATT 57.942 42.857 2.45 0.00 34.14 1.82
302 303 3.411446 TCGTGAGATGCAGGTCAAATTT 58.589 40.909 2.45 0.00 34.14 1.82
303 304 3.820467 TCGTGAGATGCAGGTCAAATTTT 59.180 39.130 2.45 0.00 34.14 1.82
304 305 5.000591 TCGTGAGATGCAGGTCAAATTTTA 58.999 37.500 2.45 0.00 34.14 1.52
305 306 5.471797 TCGTGAGATGCAGGTCAAATTTTAA 59.528 36.000 2.45 0.00 34.14 1.52
306 307 6.150976 TCGTGAGATGCAGGTCAAATTTTAAT 59.849 34.615 2.45 0.00 34.14 1.40
307 308 6.808212 CGTGAGATGCAGGTCAAATTTTAATT 59.192 34.615 2.45 0.00 0.00 1.40
308 309 7.329226 CGTGAGATGCAGGTCAAATTTTAATTT 59.671 33.333 2.45 0.00 39.07 1.82
309 310 8.992073 GTGAGATGCAGGTCAAATTTTAATTTT 58.008 29.630 2.45 0.00 36.52 1.82
310 311 9.558396 TGAGATGCAGGTCAAATTTTAATTTTT 57.442 25.926 0.00 0.00 36.52 1.94
341 342 7.944729 AGTAATCCTCAATTTGCACATAACT 57.055 32.000 0.00 0.00 0.00 2.24
342 343 8.353423 AGTAATCCTCAATTTGCACATAACTT 57.647 30.769 0.00 0.00 0.00 2.66
343 344 8.462016 AGTAATCCTCAATTTGCACATAACTTC 58.538 33.333 0.00 0.00 0.00 3.01
344 345 7.472334 AATCCTCAATTTGCACATAACTTCT 57.528 32.000 0.00 0.00 0.00 2.85
345 346 6.899393 TCCTCAATTTGCACATAACTTCTT 57.101 33.333 0.00 0.00 0.00 2.52
346 347 6.913170 TCCTCAATTTGCACATAACTTCTTC 58.087 36.000 0.00 0.00 0.00 2.87
347 348 6.716628 TCCTCAATTTGCACATAACTTCTTCT 59.283 34.615 0.00 0.00 0.00 2.85
348 349 7.231317 TCCTCAATTTGCACATAACTTCTTCTT 59.769 33.333 0.00 0.00 0.00 2.52
349 350 7.869429 CCTCAATTTGCACATAACTTCTTCTTT 59.131 33.333 0.00 0.00 0.00 2.52
350 351 8.801715 TCAATTTGCACATAACTTCTTCTTTC 57.198 30.769 0.00 0.00 0.00 2.62
351 352 7.867403 TCAATTTGCACATAACTTCTTCTTTCC 59.133 33.333 0.00 0.00 0.00 3.13
352 353 6.707440 TTTGCACATAACTTCTTCTTTCCA 57.293 33.333 0.00 0.00 0.00 3.53
353 354 6.899393 TTGCACATAACTTCTTCTTTCCAT 57.101 33.333 0.00 0.00 0.00 3.41
354 355 6.899393 TGCACATAACTTCTTCTTTCCATT 57.101 33.333 0.00 0.00 0.00 3.16
355 356 7.288810 TGCACATAACTTCTTCTTTCCATTT 57.711 32.000 0.00 0.00 0.00 2.32
356 357 7.725251 TGCACATAACTTCTTCTTTCCATTTT 58.275 30.769 0.00 0.00 0.00 1.82
357 358 8.203485 TGCACATAACTTCTTCTTTCCATTTTT 58.797 29.630 0.00 0.00 0.00 1.94
378 379 6.923928 TTTTACCTTAAAACACTGCGTACT 57.076 33.333 0.00 0.00 33.08 2.73
379 380 8.430801 TTTTTACCTTAAAACACTGCGTACTA 57.569 30.769 0.00 0.00 37.38 1.82
380 381 7.642071 TTTACCTTAAAACACTGCGTACTAG 57.358 36.000 0.00 0.00 0.00 2.57
381 382 3.992427 ACCTTAAAACACTGCGTACTAGC 59.008 43.478 0.00 0.00 37.71 3.42
382 383 3.370061 CCTTAAAACACTGCGTACTAGCC 59.630 47.826 0.00 0.00 36.02 3.93
383 384 2.536761 AAAACACTGCGTACTAGCCA 57.463 45.000 0.00 0.00 36.02 4.75
384 385 2.762535 AAACACTGCGTACTAGCCAT 57.237 45.000 0.00 0.00 36.02 4.40
385 386 2.295253 AACACTGCGTACTAGCCATC 57.705 50.000 0.00 0.00 36.02 3.51
386 387 0.460311 ACACTGCGTACTAGCCATCC 59.540 55.000 0.00 0.00 36.02 3.51
387 388 0.595053 CACTGCGTACTAGCCATCCG 60.595 60.000 0.00 0.00 36.02 4.18
388 389 1.035932 ACTGCGTACTAGCCATCCGT 61.036 55.000 0.00 0.00 36.02 4.69
389 390 0.949397 CTGCGTACTAGCCATCCGTA 59.051 55.000 0.00 0.00 36.02 4.02
390 391 0.949397 TGCGTACTAGCCATCCGTAG 59.051 55.000 0.00 0.00 36.02 3.51
391 392 1.233019 GCGTACTAGCCATCCGTAGA 58.767 55.000 0.00 0.00 0.00 2.59
392 393 1.811359 GCGTACTAGCCATCCGTAGAT 59.189 52.381 0.00 0.00 0.00 1.98
476 477 8.556213 TGACAAAGTTTATGTGTATTACTCCC 57.444 34.615 0.00 0.00 0.00 4.30
477 478 8.380099 TGACAAAGTTTATGTGTATTACTCCCT 58.620 33.333 0.00 0.00 0.00 4.20
478 479 8.788325 ACAAAGTTTATGTGTATTACTCCCTC 57.212 34.615 0.00 0.00 0.00 4.30
479 480 7.827729 ACAAAGTTTATGTGTATTACTCCCTCC 59.172 37.037 0.00 0.00 0.00 4.30
480 481 7.504926 AAGTTTATGTGTATTACTCCCTCCA 57.495 36.000 0.00 0.00 0.00 3.86
481 482 7.691993 AGTTTATGTGTATTACTCCCTCCAT 57.308 36.000 0.00 0.00 0.00 3.41
482 483 8.102484 AGTTTATGTGTATTACTCCCTCCATT 57.898 34.615 0.00 0.00 0.00 3.16
483 484 8.557450 AGTTTATGTGTATTACTCCCTCCATTT 58.443 33.333 0.00 0.00 0.00 2.32
484 485 8.837389 GTTTATGTGTATTACTCCCTCCATTTC 58.163 37.037 0.00 0.00 0.00 2.17
485 486 6.831664 ATGTGTATTACTCCCTCCATTTCT 57.168 37.500 0.00 0.00 0.00 2.52
486 487 7.931015 ATGTGTATTACTCCCTCCATTTCTA 57.069 36.000 0.00 0.00 0.00 2.10
487 488 7.743116 TGTGTATTACTCCCTCCATTTCTAA 57.257 36.000 0.00 0.00 0.00 2.10
488 489 8.153221 TGTGTATTACTCCCTCCATTTCTAAA 57.847 34.615 0.00 0.00 0.00 1.85
489 490 8.778059 TGTGTATTACTCCCTCCATTTCTAAAT 58.222 33.333 0.00 0.00 0.00 1.40
496 497 8.753497 ACTCCCTCCATTTCTAAATATTTGTC 57.247 34.615 11.05 0.00 0.00 3.18
497 498 8.560903 ACTCCCTCCATTTCTAAATATTTGTCT 58.439 33.333 11.05 0.00 0.00 3.41
498 499 9.413734 CTCCCTCCATTTCTAAATATTTGTCTT 57.586 33.333 11.05 0.00 0.00 3.01
499 500 9.768215 TCCCTCCATTTCTAAATATTTGTCTTT 57.232 29.630 11.05 0.00 0.00 2.52
519 520 9.559732 TGTCTTTCTAGAGATTTCAACAAATGA 57.440 29.630 0.00 0.00 31.94 2.57
520 521 9.818796 GTCTTTCTAGAGATTTCAACAAATGAC 57.181 33.333 0.00 0.00 37.92 3.06
521 522 9.784531 TCTTTCTAGAGATTTCAACAAATGACT 57.215 29.630 0.00 0.00 37.92 3.41
524 525 9.996554 TTCTAGAGATTTCAACAAATGACTACA 57.003 29.630 0.00 0.00 37.92 2.74
528 529 8.873830 AGAGATTTCAACAAATGACTACATACG 58.126 33.333 0.00 0.00 37.92 3.06
529 530 8.771920 AGATTTCAACAAATGACTACATACGA 57.228 30.769 0.00 0.00 37.92 3.43
530 531 9.214957 AGATTTCAACAAATGACTACATACGAA 57.785 29.630 0.00 0.00 37.92 3.85
531 532 9.478019 GATTTCAACAAATGACTACATACGAAG 57.522 33.333 0.00 0.00 37.92 3.79
532 533 6.403333 TCAACAAATGACTACATACGAAGC 57.597 37.500 0.00 0.00 35.50 3.86
533 534 5.929415 TCAACAAATGACTACATACGAAGCA 59.071 36.000 0.00 0.00 35.50 3.91
534 535 6.425417 TCAACAAATGACTACATACGAAGCAA 59.575 34.615 0.00 0.00 35.50 3.91
535 536 6.795098 ACAAATGACTACATACGAAGCAAA 57.205 33.333 0.00 0.00 35.50 3.68
536 537 7.197071 ACAAATGACTACATACGAAGCAAAA 57.803 32.000 0.00 0.00 35.50 2.44
537 538 7.644490 ACAAATGACTACATACGAAGCAAAAA 58.356 30.769 0.00 0.00 35.50 1.94
538 539 7.803189 ACAAATGACTACATACGAAGCAAAAAG 59.197 33.333 0.00 0.00 35.50 2.27
539 540 7.667043 AATGACTACATACGAAGCAAAAAGA 57.333 32.000 0.00 0.00 35.50 2.52
540 541 6.706055 TGACTACATACGAAGCAAAAAGAG 57.294 37.500 0.00 0.00 0.00 2.85
541 542 6.220930 TGACTACATACGAAGCAAAAAGAGT 58.779 36.000 0.00 0.00 0.00 3.24
542 543 6.145534 TGACTACATACGAAGCAAAAAGAGTG 59.854 38.462 0.00 0.00 0.00 3.51
543 544 6.220930 ACTACATACGAAGCAAAAAGAGTGA 58.779 36.000 0.00 0.00 0.00 3.41
544 545 6.704493 ACTACATACGAAGCAAAAAGAGTGAA 59.296 34.615 0.00 0.00 0.00 3.18
545 546 6.560253 ACATACGAAGCAAAAAGAGTGAAT 57.440 33.333 0.00 0.00 0.00 2.57
546 547 6.603095 ACATACGAAGCAAAAAGAGTGAATC 58.397 36.000 0.00 0.00 0.00 2.52
547 548 6.428159 ACATACGAAGCAAAAAGAGTGAATCT 59.572 34.615 0.00 0.00 41.27 2.40
548 549 7.602644 ACATACGAAGCAAAAAGAGTGAATCTA 59.397 33.333 0.00 0.00 37.23 1.98
549 550 6.473397 ACGAAGCAAAAAGAGTGAATCTAG 57.527 37.500 0.00 0.00 37.23 2.43
550 551 6.223852 ACGAAGCAAAAAGAGTGAATCTAGA 58.776 36.000 0.00 0.00 37.23 2.43
551 552 6.146347 ACGAAGCAAAAAGAGTGAATCTAGAC 59.854 38.462 0.00 0.00 37.23 2.59
552 553 6.367422 CGAAGCAAAAAGAGTGAATCTAGACT 59.633 38.462 0.00 0.00 37.23 3.24
553 554 7.411372 CGAAGCAAAAAGAGTGAATCTAGACTC 60.411 40.741 0.00 0.00 37.23 3.36
555 556 8.128322 AGCAAAAAGAGTGAATCTAGACTCTA 57.872 34.615 11.16 0.00 46.65 2.43
556 557 8.589338 AGCAAAAAGAGTGAATCTAGACTCTAA 58.411 33.333 11.16 0.00 46.65 2.10
557 558 9.209175 GCAAAAAGAGTGAATCTAGACTCTAAA 57.791 33.333 11.16 0.00 46.65 1.85
596 597 9.669887 ACGTTTATATGTGGTAGTCCATTTAAA 57.330 29.630 0.00 0.00 46.20 1.52
633 634 9.377238 AGACTTATATTTATAAACCGAGGGAGT 57.623 33.333 0.00 0.00 0.00 3.85
648 649 5.424757 CGAGGGAGTAATTTATTGTCCACA 58.575 41.667 7.56 0.00 0.00 4.17
659 660 2.426023 GTCCACAAGACGCCACCT 59.574 61.111 0.00 0.00 35.30 4.00
660 661 1.227853 GTCCACAAGACGCCACCTT 60.228 57.895 0.00 0.00 35.30 3.50
731 733 8.012241 GCTGTGAAAGTTTATTCAAGTGTAGAG 58.988 37.037 0.00 0.00 40.76 2.43
749 751 9.558396 AGTGTAGAGTATTACAGTAGTATGGAC 57.442 37.037 0.00 0.00 35.87 4.02
750 752 9.558396 GTGTAGAGTATTACAGTAGTATGGACT 57.442 37.037 0.00 0.00 35.66 3.85
759 761 5.208890 ACAGTAGTATGGACTATGGAAGCA 58.791 41.667 0.00 0.00 40.32 3.91
762 764 3.312890 AGTATGGACTATGGAAGCAGCT 58.687 45.455 0.00 0.00 32.65 4.24
765 767 3.827008 TGGACTATGGAAGCAGCTTAG 57.173 47.619 7.92 4.25 0.00 2.18
784 786 1.146637 GAGCATGTGATCAGATCCGC 58.853 55.000 8.00 4.77 0.00 5.54
791 793 5.532557 CATGTGATCAGATCCGCTTTAGTA 58.467 41.667 8.00 0.00 0.00 1.82
812 827 3.842869 GCTAGCTAAGCCACACACT 57.157 52.632 7.70 0.00 46.25 3.55
823 838 0.713883 CCACACACTCACGTTATCGC 59.286 55.000 0.00 0.00 41.18 4.58
826 841 2.475111 CACACACTCACGTTATCGCTTT 59.525 45.455 0.00 0.00 41.18 3.51
827 842 3.671459 CACACACTCACGTTATCGCTTTA 59.329 43.478 0.00 0.00 41.18 1.85
828 843 3.671928 ACACACTCACGTTATCGCTTTAC 59.328 43.478 0.00 0.00 41.18 2.01
875 966 0.517316 GTTTCTTGCCGCACCTAGTG 59.483 55.000 0.00 0.00 36.51 2.74
876 967 0.107831 TTTCTTGCCGCACCTAGTGT 59.892 50.000 0.00 0.00 35.75 3.55
886 977 3.291497 ACCTAGTGTGAGGCTCTCC 57.709 57.895 16.72 6.93 40.65 3.71
887 978 0.324830 ACCTAGTGTGAGGCTCTCCC 60.325 60.000 16.72 3.25 40.65 4.30
889 980 1.621072 CCTAGTGTGAGGCTCTCCCTT 60.621 57.143 16.72 3.29 46.60 3.95
890 981 1.480137 CTAGTGTGAGGCTCTCCCTTG 59.520 57.143 16.72 6.11 46.60 3.61
891 982 1.376553 GTGTGAGGCTCTCCCTTGC 60.377 63.158 16.72 0.00 46.60 4.01
897 988 1.999346 GGCTCTCCCTTGCCCTTTA 59.001 57.895 0.00 0.00 43.11 1.85
948 1039 2.479275 GAGCTCAACTTTGTAACGGTCC 59.521 50.000 9.40 0.00 0.00 4.46
988 1079 1.974236 AGTCTTCTGTGAGGAACCAGG 59.026 52.381 0.00 0.00 0.00 4.45
1098 1189 1.210478 GAGCTAAGCTTGGTCATGGGA 59.790 52.381 9.86 0.00 39.88 4.37
1146 1967 4.577834 CATGCATCCATTTACATGCTGA 57.422 40.909 0.00 0.00 44.90 4.26
1147 1968 4.939271 CATGCATCCATTTACATGCTGAA 58.061 39.130 0.00 0.00 44.90 3.02
1148 1969 5.353111 CATGCATCCATTTACATGCTGAAA 58.647 37.500 0.00 0.00 44.90 2.69
1149 1970 5.402997 TGCATCCATTTACATGCTGAAAA 57.597 34.783 5.56 0.00 44.90 2.29
1150 1971 5.791666 TGCATCCATTTACATGCTGAAAAA 58.208 33.333 5.56 0.00 44.90 1.94
1171 1992 4.413928 GGCAACCTGGTGCATGTA 57.586 55.556 18.44 0.00 46.81 2.29
1172 1993 2.183409 GGCAACCTGGTGCATGTAG 58.817 57.895 18.44 0.00 46.81 2.74
1173 1994 1.508088 GCAACCTGGTGCATGTAGC 59.492 57.895 6.00 6.00 44.29 3.58
1174 1995 0.962356 GCAACCTGGTGCATGTAGCT 60.962 55.000 14.15 0.00 44.29 3.32
1175 1996 1.089920 CAACCTGGTGCATGTAGCTC 58.910 55.000 14.15 0.00 45.94 4.09
1181 2002 1.450312 GTGCATGTAGCTCCCGCTT 60.450 57.895 0.00 0.00 46.47 4.68
1182 2003 1.450134 TGCATGTAGCTCCCGCTTG 60.450 57.895 0.00 0.00 46.47 4.01
1183 2004 2.828128 GCATGTAGCTCCCGCTTGC 61.828 63.158 0.00 0.00 46.47 4.01
1184 2005 2.202932 ATGTAGCTCCCGCTTGCG 60.203 61.111 8.14 8.14 46.47 4.85
1187 2008 4.819761 TAGCTCCCGCTTGCGCAG 62.820 66.667 11.31 6.32 46.47 5.18
1199 2020 4.785453 GCGCAGGGTCCAGGGAAG 62.785 72.222 0.30 0.00 0.00 3.46
1200 2021 4.101448 CGCAGGGTCCAGGGAAGG 62.101 72.222 0.00 0.00 0.00 3.46
1201 2022 3.732849 GCAGGGTCCAGGGAAGGG 61.733 72.222 0.00 0.00 0.00 3.95
1202 2023 2.204151 CAGGGTCCAGGGAAGGGT 60.204 66.667 0.00 0.00 0.00 4.34
1203 2024 2.125225 AGGGTCCAGGGAAGGGTC 59.875 66.667 0.00 0.00 0.00 4.46
1204 2025 3.015753 GGGTCCAGGGAAGGGTCC 61.016 72.222 0.00 0.00 44.10 4.46
1205 2026 3.400054 GGTCCAGGGAAGGGTCCG 61.400 72.222 0.00 0.00 46.04 4.79
1206 2027 2.284405 GTCCAGGGAAGGGTCCGA 60.284 66.667 0.00 0.00 46.04 4.55
1207 2028 2.284405 TCCAGGGAAGGGTCCGAC 60.284 66.667 0.00 0.00 46.04 4.79
1208 2029 3.400054 CCAGGGAAGGGTCCGACC 61.400 72.222 9.30 9.30 46.04 4.79
1209 2030 2.606519 CAGGGAAGGGTCCGACCA 60.607 66.667 19.43 0.00 46.04 4.02
1210 2031 1.995626 CAGGGAAGGGTCCGACCAT 60.996 63.158 19.43 9.67 46.04 3.55
1211 2032 1.229853 AGGGAAGGGTCCGACCATT 60.230 57.895 17.19 17.19 46.04 3.16
1212 2033 0.845102 AGGGAAGGGTCCGACCATTT 60.845 55.000 18.14 11.86 43.04 2.32
1213 2034 0.039180 GGGAAGGGTCCGACCATTTT 59.961 55.000 18.14 9.49 43.04 1.82
1214 2035 1.173913 GGAAGGGTCCGACCATTTTG 58.826 55.000 18.14 0.00 43.04 2.44
1215 2036 1.173913 GAAGGGTCCGACCATTTTGG 58.826 55.000 18.14 0.00 43.04 3.28
1216 2037 0.251608 AAGGGTCCGACCATTTTGGG 60.252 55.000 19.43 0.00 39.55 4.12
1217 2038 1.076014 GGGTCCGACCATTTTGGGT 59.924 57.895 19.43 0.00 43.37 4.51
1228 2049 4.700700 ACCATTTTGGGTCTATAGTACGC 58.299 43.478 0.00 6.13 43.37 4.42
1229 2050 4.162698 ACCATTTTGGGTCTATAGTACGCA 59.837 41.667 13.98 13.98 43.37 5.24
1230 2051 4.750098 CCATTTTGGGTCTATAGTACGCAG 59.250 45.833 16.00 9.06 40.36 5.18
1231 2052 3.447918 TTTGGGTCTATAGTACGCAGC 57.552 47.619 16.00 2.07 40.36 5.25
1232 2053 1.325355 TGGGTCTATAGTACGCAGCC 58.675 55.000 13.98 8.23 35.18 4.85
1233 2054 1.133575 TGGGTCTATAGTACGCAGCCT 60.134 52.381 13.98 0.00 35.18 4.58
1234 2055 1.962100 GGGTCTATAGTACGCAGCCTT 59.038 52.381 0.00 0.00 0.00 4.35
1235 2056 2.364647 GGGTCTATAGTACGCAGCCTTT 59.635 50.000 0.00 0.00 0.00 3.11
1236 2057 3.552478 GGGTCTATAGTACGCAGCCTTTC 60.552 52.174 0.00 0.00 0.00 2.62
1237 2058 3.552478 GGTCTATAGTACGCAGCCTTTCC 60.552 52.174 0.00 0.00 0.00 3.13
1238 2059 2.626743 TCTATAGTACGCAGCCTTTCCC 59.373 50.000 0.00 0.00 0.00 3.97
1239 2060 1.497161 ATAGTACGCAGCCTTTCCCT 58.503 50.000 0.00 0.00 0.00 4.20
1240 2061 2.148446 TAGTACGCAGCCTTTCCCTA 57.852 50.000 0.00 0.00 0.00 3.53
1241 2062 0.535797 AGTACGCAGCCTTTCCCTAC 59.464 55.000 0.00 0.00 0.00 3.18
1242 2063 0.248289 GTACGCAGCCTTTCCCTACA 59.752 55.000 0.00 0.00 0.00 2.74
1243 2064 1.134491 GTACGCAGCCTTTCCCTACAT 60.134 52.381 0.00 0.00 0.00 2.29
1250 2071 3.706594 CAGCCTTTCCCTACATGACTCTA 59.293 47.826 0.00 0.00 0.00 2.43
1333 2164 5.163824 TGTTGCGAATGTTTCAGATCTCATC 60.164 40.000 0.00 0.00 0.00 2.92
1357 2192 7.164803 TCCCCATTGTTTGAATTTTCCATTAC 58.835 34.615 0.00 0.00 0.00 1.89
1378 2213 4.571919 ACTCATGGATGTGGCAAATTTTG 58.428 39.130 4.72 4.72 0.00 2.44
1413 2252 1.448540 ACATGCCACGAGCTACAGC 60.449 57.895 0.00 0.00 44.23 4.40
1481 2341 3.371285 GGTTCATCAAGGACGAGCTAAAC 59.629 47.826 0.00 0.00 0.00 2.01
1562 2422 0.606401 TGTGGGCAGAGCAAGTAAGC 60.606 55.000 0.00 0.00 0.00 3.09
1739 2599 3.621268 GGAATGCACGCTACAACTTGATA 59.379 43.478 0.00 0.00 0.00 2.15
1751 2611 6.986817 GCTACAACTTGATAAAGATAGAGGCA 59.013 38.462 0.00 0.00 0.00 4.75
1824 2684 1.001487 CGGCAAGCAACACTGATGAAA 60.001 47.619 0.00 0.00 0.00 2.69
1825 2685 2.352030 CGGCAAGCAACACTGATGAAAT 60.352 45.455 0.00 0.00 0.00 2.17
1884 2744 4.571984 TGATTAAGCTGATGGATGTCAACG 59.428 41.667 0.00 0.00 0.00 4.10
2040 2904 9.903682 CAGTTTCACAGTCATTTTTCAAGATAT 57.096 29.630 0.00 0.00 0.00 1.63
2155 3019 0.317103 CTCGCCGAGTACCTCAATCG 60.317 60.000 5.82 0.00 36.24 3.34
2205 3069 2.859165 TCTTGATGACTTGTGGACCC 57.141 50.000 0.00 0.00 0.00 4.46
2281 3146 7.282332 AGGTAGTCGGATAATAGTAACAACC 57.718 40.000 0.00 0.00 0.00 3.77
2314 3179 4.333926 GGCTTAGCAAAGGAATGTACTCTG 59.666 45.833 6.53 0.00 32.98 3.35
2330 3195 9.845214 AATGTACTCTGGAATCCCTTATATACT 57.155 33.333 0.00 0.00 0.00 2.12
2379 3244 7.358352 CGAAGCCACAAATTTGCTACTAAAAAG 60.358 37.037 18.12 0.00 34.29 2.27
2439 3305 9.750125 GAAAACTTCAAGACCATAGTTGAAAAT 57.250 29.630 0.00 0.00 41.07 1.82
2457 3323 8.845648 GTTGAAAATTTTGTTAAAAAGTGTGGC 58.154 29.630 8.47 0.00 38.62 5.01
2490 3356 2.092429 GGCCATACTCACAATTGGAGGA 60.092 50.000 20.90 16.06 36.70 3.71
2497 3363 5.779241 ACTCACAATTGGAGGAATCCTTA 57.221 39.130 20.90 0.00 36.70 2.69
2566 3433 0.895530 TGAGCTTGAGAGTAACCCCG 59.104 55.000 0.00 0.00 0.00 5.73
2667 3535 3.045601 AGCATATTTCCCGAGGATTCG 57.954 47.619 0.00 0.00 46.29 3.34
2721 3590 0.912487 TGCCGAGGGGTTGATTAGGT 60.912 55.000 0.00 0.00 34.97 3.08
2829 3698 4.997395 TGAACATAGAAGGAGTTGTGAAGC 59.003 41.667 0.00 0.00 0.00 3.86
2921 3793 2.158871 GGCGGGACATAATGTAACTGGA 60.159 50.000 0.00 0.00 0.00 3.86
2930 3802 3.521947 AATGTAACTGGAGCTACGGAC 57.478 47.619 13.14 0.00 0.00 4.79
2950 3822 2.014857 CGAGACCTTCCGACATGTAGA 58.985 52.381 7.62 0.43 0.00 2.59
3001 3873 1.561769 ATGGATTGGAGCCACGTCCA 61.562 55.000 19.37 19.37 45.37 4.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 4.072088 GTGAAACCGCGACGCCAG 62.072 66.667 15.34 8.69 0.00 4.85
5 6 4.595538 AGTGAAACCGCGACGCCA 62.596 61.111 15.34 2.58 37.80 5.69
6 7 2.383027 AAAAGTGAAACCGCGACGCC 62.383 55.000 15.34 0.00 37.80 5.68
7 8 1.010462 AAAAGTGAAACCGCGACGC 60.010 52.632 8.23 10.49 37.80 5.19
8 9 0.656205 CCAAAAGTGAAACCGCGACG 60.656 55.000 8.23 0.00 37.80 5.12
9 10 0.933047 GCCAAAAGTGAAACCGCGAC 60.933 55.000 8.23 0.00 37.80 5.19
10 11 1.357334 GCCAAAAGTGAAACCGCGA 59.643 52.632 8.23 0.00 37.80 5.87
11 12 2.008697 CGCCAAAAGTGAAACCGCG 61.009 57.895 0.00 0.00 37.80 6.46
12 13 0.526739 AACGCCAAAAGTGAAACCGC 60.527 50.000 0.00 0.00 37.80 5.68
13 14 1.202200 TGAACGCCAAAAGTGAAACCG 60.202 47.619 0.00 0.00 37.80 4.44
14 15 2.098443 TCTGAACGCCAAAAGTGAAACC 59.902 45.455 0.00 0.00 37.80 3.27
15 16 3.414549 TCTGAACGCCAAAAGTGAAAC 57.585 42.857 0.00 0.00 0.00 2.78
16 17 4.170256 GTTTCTGAACGCCAAAAGTGAAA 58.830 39.130 0.00 0.00 0.00 2.69
17 18 3.191581 TGTTTCTGAACGCCAAAAGTGAA 59.808 39.130 0.00 0.00 38.65 3.18
18 19 2.750166 TGTTTCTGAACGCCAAAAGTGA 59.250 40.909 0.00 0.00 38.65 3.41
19 20 3.108144 CTGTTTCTGAACGCCAAAAGTG 58.892 45.455 0.00 0.00 38.65 3.16
20 21 2.752903 ACTGTTTCTGAACGCCAAAAGT 59.247 40.909 0.00 0.00 38.65 2.66
21 22 3.420839 ACTGTTTCTGAACGCCAAAAG 57.579 42.857 0.00 0.00 38.65 2.27
22 23 3.506810 CAACTGTTTCTGAACGCCAAAA 58.493 40.909 0.00 0.00 38.65 2.44
23 24 2.159310 CCAACTGTTTCTGAACGCCAAA 60.159 45.455 0.00 0.00 38.65 3.28
24 25 1.403679 CCAACTGTTTCTGAACGCCAA 59.596 47.619 0.00 0.00 38.65 4.52
25 26 1.021202 CCAACTGTTTCTGAACGCCA 58.979 50.000 0.00 0.00 38.65 5.69
26 27 1.264288 CTCCAACTGTTTCTGAACGCC 59.736 52.381 0.00 0.00 38.65 5.68
27 28 1.264288 CCTCCAACTGTTTCTGAACGC 59.736 52.381 0.00 0.00 38.65 4.84
28 29 1.873591 CCCTCCAACTGTTTCTGAACG 59.126 52.381 0.00 0.00 38.65 3.95
29 30 1.609072 GCCCTCCAACTGTTTCTGAAC 59.391 52.381 0.00 0.00 36.29 3.18
30 31 1.813862 CGCCCTCCAACTGTTTCTGAA 60.814 52.381 0.00 0.00 0.00 3.02
31 32 0.250295 CGCCCTCCAACTGTTTCTGA 60.250 55.000 0.00 0.00 0.00 3.27
32 33 0.250295 TCGCCCTCCAACTGTTTCTG 60.250 55.000 0.00 0.00 0.00 3.02
33 34 0.472471 TTCGCCCTCCAACTGTTTCT 59.528 50.000 0.00 0.00 0.00 2.52
34 35 0.875059 CTTCGCCCTCCAACTGTTTC 59.125 55.000 0.00 0.00 0.00 2.78
35 36 0.537371 CCTTCGCCCTCCAACTGTTT 60.537 55.000 0.00 0.00 0.00 2.83
36 37 1.073199 CCTTCGCCCTCCAACTGTT 59.927 57.895 0.00 0.00 0.00 3.16
37 38 2.750350 CCTTCGCCCTCCAACTGT 59.250 61.111 0.00 0.00 0.00 3.55
38 39 2.045926 CCCTTCGCCCTCCAACTG 60.046 66.667 0.00 0.00 0.00 3.16
39 40 3.330720 CCCCTTCGCCCTCCAACT 61.331 66.667 0.00 0.00 0.00 3.16
40 41 2.211468 ATTCCCCTTCGCCCTCCAAC 62.211 60.000 0.00 0.00 0.00 3.77
41 42 1.506028 AATTCCCCTTCGCCCTCCAA 61.506 55.000 0.00 0.00 0.00 3.53
42 43 1.506028 AAATTCCCCTTCGCCCTCCA 61.506 55.000 0.00 0.00 0.00 3.86
43 44 1.037579 CAAATTCCCCTTCGCCCTCC 61.038 60.000 0.00 0.00 0.00 4.30
44 45 1.037579 CCAAATTCCCCTTCGCCCTC 61.038 60.000 0.00 0.00 0.00 4.30
45 46 1.000359 CCAAATTCCCCTTCGCCCT 60.000 57.895 0.00 0.00 0.00 5.19
46 47 0.902984 AACCAAATTCCCCTTCGCCC 60.903 55.000 0.00 0.00 0.00 6.13
47 48 0.246360 CAACCAAATTCCCCTTCGCC 59.754 55.000 0.00 0.00 0.00 5.54
48 49 0.246360 CCAACCAAATTCCCCTTCGC 59.754 55.000 0.00 0.00 0.00 4.70
49 50 0.894835 CCCAACCAAATTCCCCTTCG 59.105 55.000 0.00 0.00 0.00 3.79
50 51 0.613260 GCCCAACCAAATTCCCCTTC 59.387 55.000 0.00 0.00 0.00 3.46
51 52 0.840288 GGCCCAACCAAATTCCCCTT 60.840 55.000 0.00 0.00 38.86 3.95
52 53 1.229496 GGCCCAACCAAATTCCCCT 60.229 57.895 0.00 0.00 38.86 4.79
53 54 0.041982 TAGGCCCAACCAAATTCCCC 59.958 55.000 0.00 0.00 43.14 4.81
54 55 1.191535 GTAGGCCCAACCAAATTCCC 58.808 55.000 0.00 0.00 43.14 3.97
55 56 1.548719 GTGTAGGCCCAACCAAATTCC 59.451 52.381 0.00 0.00 43.14 3.01
56 57 1.548719 GGTGTAGGCCCAACCAAATTC 59.451 52.381 13.00 0.00 43.14 2.17
57 58 1.639722 GGTGTAGGCCCAACCAAATT 58.360 50.000 13.00 0.00 43.14 1.82
58 59 3.374318 GGTGTAGGCCCAACCAAAT 57.626 52.632 13.00 0.00 43.14 2.32
59 60 4.934316 GGTGTAGGCCCAACCAAA 57.066 55.556 13.00 0.00 43.14 3.28
69 70 3.797353 ATGCCGGCAGGGTGTAGG 61.797 66.667 35.36 0.00 38.44 3.18
70 71 2.514592 CATGCCGGCAGGGTGTAG 60.515 66.667 35.36 13.71 38.44 2.74
71 72 4.108299 CCATGCCGGCAGGGTGTA 62.108 66.667 44.09 17.70 42.32 2.90
80 81 1.378514 ACTAACTTGCCCATGCCGG 60.379 57.895 0.00 0.00 36.33 6.13
81 82 0.960364 ACACTAACTTGCCCATGCCG 60.960 55.000 0.00 0.00 36.33 5.69
82 83 0.527565 CACACTAACTTGCCCATGCC 59.472 55.000 0.00 0.00 36.33 4.40
83 84 0.109132 GCACACTAACTTGCCCATGC 60.109 55.000 0.00 0.00 38.26 4.06
89 90 0.385974 CGCTTGGCACACTAACTTGC 60.386 55.000 0.00 0.00 39.29 4.01
90 91 0.944386 ACGCTTGGCACACTAACTTG 59.056 50.000 0.00 0.00 39.29 3.16
91 92 1.226746 GACGCTTGGCACACTAACTT 58.773 50.000 0.00 0.00 39.29 2.66
92 93 0.602905 GGACGCTTGGCACACTAACT 60.603 55.000 0.00 0.00 39.29 2.24
93 94 1.574702 GGGACGCTTGGCACACTAAC 61.575 60.000 0.00 0.00 39.29 2.34
94 95 1.302192 GGGACGCTTGGCACACTAA 60.302 57.895 0.00 0.00 39.29 2.24
95 96 2.345991 GGGACGCTTGGCACACTA 59.654 61.111 0.00 0.00 39.29 2.74
108 109 1.376609 CCTTAGCACATTGGCGGGAC 61.377 60.000 0.00 0.00 39.27 4.46
109 110 1.077787 CCTTAGCACATTGGCGGGA 60.078 57.895 0.00 0.00 39.27 5.14
110 111 0.107410 TACCTTAGCACATTGGCGGG 60.107 55.000 0.00 0.00 39.27 6.13
111 112 1.299541 CTACCTTAGCACATTGGCGG 58.700 55.000 0.00 0.00 39.27 6.13
120 121 6.183360 CTAGGATAGTTTGTGCTACCTTAGCA 60.183 42.308 3.72 3.72 46.00 3.49
121 122 6.217294 CTAGGATAGTTTGTGCTACCTTAGC 58.783 44.000 0.00 0.00 42.25 3.09
122 123 6.217294 GCTAGGATAGTTTGTGCTACCTTAG 58.783 44.000 0.00 0.00 41.93 2.18
123 124 5.221185 CGCTAGGATAGTTTGTGCTACCTTA 60.221 44.000 0.00 0.00 41.93 2.69
124 125 4.441634 CGCTAGGATAGTTTGTGCTACCTT 60.442 45.833 0.00 0.00 41.93 3.50
125 126 3.068307 CGCTAGGATAGTTTGTGCTACCT 59.932 47.826 0.00 0.00 41.93 3.08
126 127 3.181478 ACGCTAGGATAGTTTGTGCTACC 60.181 47.826 0.00 0.00 41.93 3.18
127 128 4.043037 ACGCTAGGATAGTTTGTGCTAC 57.957 45.455 0.00 0.00 41.93 3.58
128 129 4.401519 AGAACGCTAGGATAGTTTGTGCTA 59.598 41.667 0.00 0.00 41.93 3.49
129 130 3.195825 AGAACGCTAGGATAGTTTGTGCT 59.804 43.478 0.00 0.00 41.93 4.40
130 131 3.307242 CAGAACGCTAGGATAGTTTGTGC 59.693 47.826 0.00 0.00 41.93 4.57
131 132 3.865745 CCAGAACGCTAGGATAGTTTGTG 59.134 47.826 0.00 0.00 41.93 3.33
132 133 3.767673 TCCAGAACGCTAGGATAGTTTGT 59.232 43.478 0.00 0.00 41.93 2.83
133 134 4.142138 ACTCCAGAACGCTAGGATAGTTTG 60.142 45.833 0.00 0.00 41.93 2.93
134 135 4.024670 ACTCCAGAACGCTAGGATAGTTT 58.975 43.478 0.00 0.00 41.93 2.66
135 136 3.633065 GACTCCAGAACGCTAGGATAGTT 59.367 47.826 0.00 0.00 41.93 2.24
136 137 3.215975 GACTCCAGAACGCTAGGATAGT 58.784 50.000 0.00 0.00 41.93 2.12
137 138 2.554893 GGACTCCAGAACGCTAGGATAG 59.445 54.545 0.00 0.00 43.09 2.08
138 139 2.092049 TGGACTCCAGAACGCTAGGATA 60.092 50.000 0.00 0.00 0.00 2.59
139 140 1.342076 TGGACTCCAGAACGCTAGGAT 60.342 52.381 0.00 0.00 0.00 3.24
140 141 0.039180 TGGACTCCAGAACGCTAGGA 59.961 55.000 0.00 0.00 0.00 2.94
141 142 2.579878 TGGACTCCAGAACGCTAGG 58.420 57.895 0.00 0.00 0.00 3.02
172 173 7.870445 GTCCTGCTTGGTATACAAAATGAAAAA 59.130 33.333 5.01 0.00 38.91 1.94
173 174 7.375053 GTCCTGCTTGGTATACAAAATGAAAA 58.625 34.615 5.01 0.00 38.91 2.29
174 175 6.348950 CGTCCTGCTTGGTATACAAAATGAAA 60.349 38.462 5.01 0.00 38.91 2.69
175 176 5.123186 CGTCCTGCTTGGTATACAAAATGAA 59.877 40.000 5.01 0.00 38.91 2.57
176 177 4.634004 CGTCCTGCTTGGTATACAAAATGA 59.366 41.667 5.01 0.00 38.91 2.57
177 178 4.201910 CCGTCCTGCTTGGTATACAAAATG 60.202 45.833 5.01 0.00 38.91 2.32
178 179 3.945285 CCGTCCTGCTTGGTATACAAAAT 59.055 43.478 5.01 0.00 38.91 1.82
179 180 3.340034 CCGTCCTGCTTGGTATACAAAA 58.660 45.455 5.01 0.00 38.91 2.44
180 181 2.355310 CCCGTCCTGCTTGGTATACAAA 60.355 50.000 5.01 0.00 38.91 2.83
181 182 1.208535 CCCGTCCTGCTTGGTATACAA 59.791 52.381 5.01 0.00 37.55 2.41
182 183 0.828022 CCCGTCCTGCTTGGTATACA 59.172 55.000 5.01 0.00 37.07 2.29
183 184 0.828677 ACCCGTCCTGCTTGGTATAC 59.171 55.000 0.00 0.00 37.07 1.47
184 185 1.483415 GAACCCGTCCTGCTTGGTATA 59.517 52.381 0.00 0.00 37.07 1.47
185 186 0.252197 GAACCCGTCCTGCTTGGTAT 59.748 55.000 0.00 0.00 37.07 2.73
186 187 1.675219 GAACCCGTCCTGCTTGGTA 59.325 57.895 0.00 0.00 37.07 3.25
187 188 2.430367 GAACCCGTCCTGCTTGGT 59.570 61.111 0.00 0.00 37.07 3.67
188 189 2.742372 CGAACCCGTCCTGCTTGG 60.742 66.667 0.00 0.00 37.10 3.61
189 190 3.423154 GCGAACCCGTCCTGCTTG 61.423 66.667 0.00 0.00 38.24 4.01
209 210 4.537433 CTAGGGGTGCAGAGCGGC 62.537 72.222 0.00 0.00 0.00 6.53
210 211 3.077556 ACTAGGGGTGCAGAGCGG 61.078 66.667 0.00 0.00 0.00 5.52
211 212 2.185350 CACTAGGGGTGCAGAGCG 59.815 66.667 0.00 0.00 39.22 5.03
219 220 0.988678 GGATCCTTGGCACTAGGGGT 60.989 60.000 3.84 0.00 33.41 4.95
220 221 0.988145 TGGATCCTTGGCACTAGGGG 60.988 60.000 14.23 0.00 33.41 4.79
221 222 0.181350 GTGGATCCTTGGCACTAGGG 59.819 60.000 14.23 0.00 33.41 3.53
222 223 0.179073 CGTGGATCCTTGGCACTAGG 60.179 60.000 14.23 0.00 0.00 3.02
223 224 0.811616 GCGTGGATCCTTGGCACTAG 60.812 60.000 14.23 0.00 0.00 2.57
224 225 1.220749 GCGTGGATCCTTGGCACTA 59.779 57.895 14.23 0.00 0.00 2.74
225 226 2.045926 GCGTGGATCCTTGGCACT 60.046 61.111 14.23 0.00 0.00 4.40
226 227 3.134127 GGCGTGGATCCTTGGCAC 61.134 66.667 20.37 7.19 0.00 5.01
227 228 4.424711 GGGCGTGGATCCTTGGCA 62.425 66.667 24.43 0.00 0.00 4.92
229 230 3.740128 CTCGGGCGTGGATCCTTGG 62.740 68.421 14.23 3.07 0.00 3.61
230 231 2.202932 CTCGGGCGTGGATCCTTG 60.203 66.667 14.23 6.37 0.00 3.61
231 232 2.363795 TCTCGGGCGTGGATCCTT 60.364 61.111 14.23 0.00 0.00 3.36
232 233 2.835431 CTCTCGGGCGTGGATCCT 60.835 66.667 14.23 0.00 0.00 3.24
233 234 3.917760 CCTCTCGGGCGTGGATCC 61.918 72.222 4.20 4.20 0.00 3.36
242 243 1.152735 TACTAGGCTGCCTCTCGGG 60.153 63.158 27.16 13.33 34.61 5.14
243 244 1.801309 GCTACTAGGCTGCCTCTCGG 61.801 65.000 27.16 15.76 34.61 4.63
244 245 0.821711 AGCTACTAGGCTGCCTCTCG 60.822 60.000 27.16 16.91 41.43 4.04
245 246 0.958822 GAGCTACTAGGCTGCCTCTC 59.041 60.000 27.16 20.37 43.20 3.20
246 247 0.821711 CGAGCTACTAGGCTGCCTCT 60.822 60.000 27.16 15.84 43.20 3.69
247 248 0.820074 TCGAGCTACTAGGCTGCCTC 60.820 60.000 27.16 10.59 43.20 4.70
248 249 0.178975 ATCGAGCTACTAGGCTGCCT 60.179 55.000 26.52 26.52 43.20 4.75
249 250 0.676736 AATCGAGCTACTAGGCTGCC 59.323 55.000 11.65 11.65 43.20 4.85
250 251 2.035321 AGAAATCGAGCTACTAGGCTGC 59.965 50.000 0.00 0.00 43.20 5.25
251 252 3.316588 TGAGAAATCGAGCTACTAGGCTG 59.683 47.826 0.00 0.00 43.20 4.85
252 253 3.556999 TGAGAAATCGAGCTACTAGGCT 58.443 45.455 0.00 0.00 46.11 4.58
253 254 3.992260 TGAGAAATCGAGCTACTAGGC 57.008 47.619 0.00 0.00 0.00 3.93
254 255 6.758886 ACAAAATGAGAAATCGAGCTACTAGG 59.241 38.462 0.00 0.00 0.00 3.02
255 256 7.763172 ACAAAATGAGAAATCGAGCTACTAG 57.237 36.000 0.00 0.00 0.00 2.57
256 257 8.547967 AAACAAAATGAGAAATCGAGCTACTA 57.452 30.769 0.00 0.00 0.00 1.82
257 258 7.440523 AAACAAAATGAGAAATCGAGCTACT 57.559 32.000 0.00 0.00 0.00 2.57
258 259 6.462949 CGAAACAAAATGAGAAATCGAGCTAC 59.537 38.462 0.00 0.00 0.00 3.58
259 260 6.147164 ACGAAACAAAATGAGAAATCGAGCTA 59.853 34.615 0.00 0.00 33.61 3.32
260 261 5.049405 ACGAAACAAAATGAGAAATCGAGCT 60.049 36.000 0.00 0.00 33.61 4.09
261 262 5.058492 CACGAAACAAAATGAGAAATCGAGC 59.942 40.000 0.00 0.00 33.61 5.03
262 263 6.362686 TCACGAAACAAAATGAGAAATCGAG 58.637 36.000 0.00 0.00 33.61 4.04
263 264 6.201997 TCTCACGAAACAAAATGAGAAATCGA 59.798 34.615 0.41 0.00 43.47 3.59
264 265 6.362686 TCTCACGAAACAAAATGAGAAATCG 58.637 36.000 0.41 0.00 43.47 3.34
270 271 4.786507 TGCATCTCACGAAACAAAATGAG 58.213 39.130 0.00 0.00 39.99 2.90
271 272 4.320421 CCTGCATCTCACGAAACAAAATGA 60.320 41.667 0.00 0.00 0.00 2.57
272 273 3.916172 CCTGCATCTCACGAAACAAAATG 59.084 43.478 0.00 0.00 0.00 2.32
273 274 3.569701 ACCTGCATCTCACGAAACAAAAT 59.430 39.130 0.00 0.00 0.00 1.82
274 275 2.948979 ACCTGCATCTCACGAAACAAAA 59.051 40.909 0.00 0.00 0.00 2.44
275 276 2.548057 GACCTGCATCTCACGAAACAAA 59.452 45.455 0.00 0.00 0.00 2.83
276 277 2.143122 GACCTGCATCTCACGAAACAA 58.857 47.619 0.00 0.00 0.00 2.83
277 278 1.069978 TGACCTGCATCTCACGAAACA 59.930 47.619 0.00 0.00 0.00 2.83
278 279 1.795768 TGACCTGCATCTCACGAAAC 58.204 50.000 0.00 0.00 0.00 2.78
279 280 2.542020 TTGACCTGCATCTCACGAAA 57.458 45.000 0.00 0.00 0.00 3.46
280 281 2.542020 TTTGACCTGCATCTCACGAA 57.458 45.000 0.00 0.00 0.00 3.85
281 282 2.768253 ATTTGACCTGCATCTCACGA 57.232 45.000 0.00 0.00 0.00 4.35
282 283 3.837213 AAATTTGACCTGCATCTCACG 57.163 42.857 0.00 0.00 0.00 4.35
283 284 8.538409 AAATTAAAATTTGACCTGCATCTCAC 57.462 30.769 0.00 0.00 37.24 3.51
284 285 9.558396 AAAAATTAAAATTTGACCTGCATCTCA 57.442 25.926 1.61 0.00 38.53 3.27
315 316 9.461312 AGTTATGTGCAAATTGAGGATTACTAA 57.539 29.630 0.00 0.00 0.00 2.24
316 317 9.461312 AAGTTATGTGCAAATTGAGGATTACTA 57.539 29.630 0.00 0.00 0.00 1.82
317 318 7.944729 AGTTATGTGCAAATTGAGGATTACT 57.055 32.000 0.00 0.00 0.00 2.24
318 319 8.462016 AGAAGTTATGTGCAAATTGAGGATTAC 58.538 33.333 0.00 0.00 0.00 1.89
319 320 8.579850 AGAAGTTATGTGCAAATTGAGGATTA 57.420 30.769 0.00 0.00 0.00 1.75
320 321 7.472334 AGAAGTTATGTGCAAATTGAGGATT 57.528 32.000 0.00 0.00 0.00 3.01
321 322 7.395489 AGAAGAAGTTATGTGCAAATTGAGGAT 59.605 33.333 0.00 0.00 0.00 3.24
322 323 6.716628 AGAAGAAGTTATGTGCAAATTGAGGA 59.283 34.615 0.00 0.00 0.00 3.71
323 324 6.917533 AGAAGAAGTTATGTGCAAATTGAGG 58.082 36.000 0.00 0.00 0.00 3.86
324 325 8.807667 AAAGAAGAAGTTATGTGCAAATTGAG 57.192 30.769 0.00 0.00 0.00 3.02
325 326 7.867403 GGAAAGAAGAAGTTATGTGCAAATTGA 59.133 33.333 0.00 0.00 0.00 2.57
326 327 7.652909 TGGAAAGAAGAAGTTATGTGCAAATTG 59.347 33.333 0.00 0.00 0.00 2.32
327 328 7.725251 TGGAAAGAAGAAGTTATGTGCAAATT 58.275 30.769 0.00 0.00 0.00 1.82
328 329 7.288810 TGGAAAGAAGAAGTTATGTGCAAAT 57.711 32.000 0.00 0.00 0.00 2.32
329 330 6.707440 TGGAAAGAAGAAGTTATGTGCAAA 57.293 33.333 0.00 0.00 0.00 3.68
330 331 6.899393 ATGGAAAGAAGAAGTTATGTGCAA 57.101 33.333 0.00 0.00 0.00 4.08
331 332 6.899393 AATGGAAAGAAGAAGTTATGTGCA 57.101 33.333 0.00 0.00 0.00 4.57
332 333 8.593492 AAAAATGGAAAGAAGAAGTTATGTGC 57.407 30.769 0.00 0.00 0.00 4.57
354 355 7.319142 AGTACGCAGTGTTTTAAGGTAAAAA 57.681 32.000 0.00 0.00 45.73 1.94
355 356 6.923928 AGTACGCAGTGTTTTAAGGTAAAA 57.076 33.333 0.00 0.00 45.73 1.52
356 357 6.146021 GCTAGTACGCAGTGTTTTAAGGTAAA 59.854 38.462 0.00 0.00 45.73 2.01
357 358 5.634859 GCTAGTACGCAGTGTTTTAAGGTAA 59.365 40.000 0.00 0.00 45.73 2.85
358 359 5.163513 GCTAGTACGCAGTGTTTTAAGGTA 58.836 41.667 0.00 0.00 45.73 3.08
359 360 3.992427 GCTAGTACGCAGTGTTTTAAGGT 59.008 43.478 0.00 0.00 45.73 3.50
360 361 3.370061 GGCTAGTACGCAGTGTTTTAAGG 59.630 47.826 0.00 0.00 45.73 2.69
361 362 3.991773 TGGCTAGTACGCAGTGTTTTAAG 59.008 43.478 0.00 0.00 45.73 1.85
362 363 3.992643 TGGCTAGTACGCAGTGTTTTAA 58.007 40.909 0.00 0.00 45.73 1.52
363 364 3.663995 TGGCTAGTACGCAGTGTTTTA 57.336 42.857 0.00 0.00 45.73 1.52
364 365 2.536761 TGGCTAGTACGCAGTGTTTT 57.463 45.000 0.00 0.00 45.73 2.43
365 366 2.618053 GATGGCTAGTACGCAGTGTTT 58.382 47.619 0.00 0.00 45.73 2.83
366 367 1.134788 GGATGGCTAGTACGCAGTGTT 60.135 52.381 0.00 0.00 45.73 3.32
367 368 0.460311 GGATGGCTAGTACGCAGTGT 59.540 55.000 0.00 0.00 45.73 3.55
368 369 0.595053 CGGATGGCTAGTACGCAGTG 60.595 60.000 0.00 0.00 45.73 3.66
370 371 0.949397 TACGGATGGCTAGTACGCAG 59.051 55.000 0.00 0.00 0.00 5.18
371 372 0.949397 CTACGGATGGCTAGTACGCA 59.051 55.000 0.00 0.00 0.00 5.24
372 373 1.233019 TCTACGGATGGCTAGTACGC 58.767 55.000 0.00 0.00 0.00 4.42
373 374 2.414293 GCATCTACGGATGGCTAGTACG 60.414 54.545 7.89 0.00 46.77 3.67
374 375 2.820787 AGCATCTACGGATGGCTAGTAC 59.179 50.000 7.89 0.00 46.77 2.73
375 376 2.820197 CAGCATCTACGGATGGCTAGTA 59.180 50.000 7.89 0.00 46.77 1.82
376 377 1.615883 CAGCATCTACGGATGGCTAGT 59.384 52.381 7.89 0.00 46.77 2.57
377 378 1.671261 GCAGCATCTACGGATGGCTAG 60.671 57.143 7.89 0.00 46.77 3.42
378 379 0.318441 GCAGCATCTACGGATGGCTA 59.682 55.000 7.89 0.00 46.77 3.93
379 380 1.070445 GCAGCATCTACGGATGGCT 59.930 57.895 7.89 0.00 46.77 4.75
380 381 0.318441 TAGCAGCATCTACGGATGGC 59.682 55.000 7.89 4.26 46.77 4.40
381 382 1.615883 ACTAGCAGCATCTACGGATGG 59.384 52.381 7.89 0.00 46.77 3.51
383 384 1.537638 CGACTAGCAGCATCTACGGAT 59.462 52.381 0.00 0.00 0.00 4.18
384 385 0.945099 CGACTAGCAGCATCTACGGA 59.055 55.000 0.00 0.00 0.00 4.69
385 386 3.463574 CGACTAGCAGCATCTACGG 57.536 57.895 0.00 0.00 0.00 4.02
472 473 8.986929 AGACAAATATTTAGAAATGGAGGGAG 57.013 34.615 0.00 0.00 0.00 4.30
473 474 9.768215 AAAGACAAATATTTAGAAATGGAGGGA 57.232 29.630 0.00 0.00 0.00 4.20
493 494 9.559732 TCATTTGTTGAAATCTCTAGAAAGACA 57.440 29.630 0.00 0.00 28.65 3.41
494 495 9.818796 GTCATTTGTTGAAATCTCTAGAAAGAC 57.181 33.333 0.00 0.00 35.70 3.01
495 496 9.784531 AGTCATTTGTTGAAATCTCTAGAAAGA 57.215 29.630 0.00 0.00 35.70 2.52
498 499 9.996554 TGTAGTCATTTGTTGAAATCTCTAGAA 57.003 29.630 0.00 0.00 35.70 2.10
502 503 8.873830 CGTATGTAGTCATTTGTTGAAATCTCT 58.126 33.333 0.00 0.00 35.70 3.10
503 504 8.869897 TCGTATGTAGTCATTTGTTGAAATCTC 58.130 33.333 0.00 0.00 35.70 2.75
504 505 8.771920 TCGTATGTAGTCATTTGTTGAAATCT 57.228 30.769 0.00 0.00 35.70 2.40
505 506 9.478019 CTTCGTATGTAGTCATTTGTTGAAATC 57.522 33.333 0.00 0.00 35.70 2.17
506 507 7.962918 GCTTCGTATGTAGTCATTTGTTGAAAT 59.037 33.333 0.00 0.00 35.70 2.17
507 508 7.041712 TGCTTCGTATGTAGTCATTTGTTGAAA 60.042 33.333 0.00 0.00 35.70 2.69
508 509 6.425417 TGCTTCGTATGTAGTCATTTGTTGAA 59.575 34.615 0.00 0.00 35.70 2.69
509 510 5.929415 TGCTTCGTATGTAGTCATTTGTTGA 59.071 36.000 0.00 0.00 35.70 3.18
510 511 6.164408 TGCTTCGTATGTAGTCATTTGTTG 57.836 37.500 0.00 0.00 35.70 3.33
511 512 6.795098 TTGCTTCGTATGTAGTCATTTGTT 57.205 33.333 0.00 0.00 35.70 2.83
512 513 6.795098 TTTGCTTCGTATGTAGTCATTTGT 57.205 33.333 0.00 0.00 35.70 2.83
513 514 8.015087 TCTTTTTGCTTCGTATGTAGTCATTTG 58.985 33.333 0.00 0.00 35.70 2.32
514 515 8.094798 TCTTTTTGCTTCGTATGTAGTCATTT 57.905 30.769 0.00 0.00 35.70 2.32
515 516 7.387948 ACTCTTTTTGCTTCGTATGTAGTCATT 59.612 33.333 0.00 0.00 35.70 2.57
516 517 6.874134 ACTCTTTTTGCTTCGTATGTAGTCAT 59.126 34.615 0.00 0.00 38.00 3.06
517 518 6.145534 CACTCTTTTTGCTTCGTATGTAGTCA 59.854 38.462 0.00 0.00 0.00 3.41
518 519 6.365247 TCACTCTTTTTGCTTCGTATGTAGTC 59.635 38.462 0.00 0.00 0.00 2.59
519 520 6.220930 TCACTCTTTTTGCTTCGTATGTAGT 58.779 36.000 0.00 0.00 0.00 2.73
520 521 6.706055 TCACTCTTTTTGCTTCGTATGTAG 57.294 37.500 0.00 0.00 0.00 2.74
521 522 7.602644 AGATTCACTCTTTTTGCTTCGTATGTA 59.397 33.333 0.00 0.00 0.00 2.29
522 523 6.428159 AGATTCACTCTTTTTGCTTCGTATGT 59.572 34.615 0.00 0.00 0.00 2.29
523 524 6.835914 AGATTCACTCTTTTTGCTTCGTATG 58.164 36.000 0.00 0.00 0.00 2.39
524 525 8.035394 TCTAGATTCACTCTTTTTGCTTCGTAT 58.965 33.333 0.00 0.00 35.28 3.06
525 526 7.328737 GTCTAGATTCACTCTTTTTGCTTCGTA 59.671 37.037 0.00 0.00 35.28 3.43
526 527 6.146347 GTCTAGATTCACTCTTTTTGCTTCGT 59.854 38.462 0.00 0.00 35.28 3.85
527 528 6.367422 AGTCTAGATTCACTCTTTTTGCTTCG 59.633 38.462 0.00 0.00 35.28 3.79
528 529 7.602265 AGAGTCTAGATTCACTCTTTTTGCTTC 59.398 37.037 16.67 0.00 45.94 3.86
529 530 7.449247 AGAGTCTAGATTCACTCTTTTTGCTT 58.551 34.615 16.67 0.00 45.94 3.91
530 531 7.003402 AGAGTCTAGATTCACTCTTTTTGCT 57.997 36.000 16.67 0.00 45.94 3.91
531 532 8.764524 TTAGAGTCTAGATTCACTCTTTTTGC 57.235 34.615 16.67 0.00 45.94 3.68
607 608 9.377238 ACTCCCTCGGTTTATAAATATAAGTCT 57.623 33.333 0.31 0.00 30.57 3.24
618 619 9.768662 GACAATAAATTACTCCCTCGGTTTATA 57.231 33.333 0.00 0.00 0.00 0.98
619 620 7.718314 GGACAATAAATTACTCCCTCGGTTTAT 59.282 37.037 0.00 0.00 0.00 1.40
620 621 7.049754 GGACAATAAATTACTCCCTCGGTTTA 58.950 38.462 0.00 0.00 0.00 2.01
621 622 5.884232 GGACAATAAATTACTCCCTCGGTTT 59.116 40.000 0.00 0.00 0.00 3.27
622 623 5.045432 TGGACAATAAATTACTCCCTCGGTT 60.045 40.000 0.00 0.00 0.00 4.44
623 624 4.472108 TGGACAATAAATTACTCCCTCGGT 59.528 41.667 0.00 0.00 0.00 4.69
624 625 4.814771 GTGGACAATAAATTACTCCCTCGG 59.185 45.833 0.00 0.00 0.00 4.63
625 626 5.424757 TGTGGACAATAAATTACTCCCTCG 58.575 41.667 0.00 0.00 0.00 4.63
626 627 7.065923 GTCTTGTGGACAATAAATTACTCCCTC 59.934 40.741 0.00 0.00 43.94 4.30
627 628 6.884836 GTCTTGTGGACAATAAATTACTCCCT 59.115 38.462 0.00 0.00 43.94 4.20
628 629 6.183360 CGTCTTGTGGACAATAAATTACTCCC 60.183 42.308 0.00 0.00 44.70 4.30
629 630 6.674760 GCGTCTTGTGGACAATAAATTACTCC 60.675 42.308 0.00 0.00 44.70 3.85
630 631 6.248631 GCGTCTTGTGGACAATAAATTACTC 58.751 40.000 0.00 0.00 44.70 2.59
631 632 5.123344 GGCGTCTTGTGGACAATAAATTACT 59.877 40.000 0.00 0.00 44.70 2.24
632 633 5.106475 TGGCGTCTTGTGGACAATAAATTAC 60.106 40.000 0.00 0.00 44.70 1.89
633 634 5.004448 TGGCGTCTTGTGGACAATAAATTA 58.996 37.500 0.00 0.00 44.70 1.40
634 635 3.823873 TGGCGTCTTGTGGACAATAAATT 59.176 39.130 0.00 0.00 44.70 1.82
639 640 0.889186 GGTGGCGTCTTGTGGACAAT 60.889 55.000 0.00 0.00 44.70 2.71
640 641 1.525077 GGTGGCGTCTTGTGGACAA 60.525 57.895 0.00 0.00 44.70 3.18
648 649 2.980233 GCAGCAAGGTGGCGTCTT 60.980 61.111 1.13 0.00 39.27 3.01
689 690 8.206867 ACTTTCACAGCTAATCATCTTGCTATA 58.793 33.333 0.00 0.00 34.10 1.31
691 692 6.409704 ACTTTCACAGCTAATCATCTTGCTA 58.590 36.000 0.00 0.00 34.10 3.49
692 693 5.251764 ACTTTCACAGCTAATCATCTTGCT 58.748 37.500 0.00 0.00 36.04 3.91
693 694 5.557891 ACTTTCACAGCTAATCATCTTGC 57.442 39.130 0.00 0.00 0.00 4.01
701 702 8.850156 ACACTTGAATAAACTTTCACAGCTAAT 58.150 29.630 0.00 0.00 35.42 1.73
704 705 6.699575 ACACTTGAATAAACTTTCACAGCT 57.300 33.333 0.00 0.00 35.42 4.24
738 740 4.282195 GCTGCTTCCATAGTCCATACTACT 59.718 45.833 0.00 0.00 40.98 2.57
740 742 4.483950 AGCTGCTTCCATAGTCCATACTA 58.516 43.478 0.00 0.00 42.35 1.82
741 743 3.312890 AGCTGCTTCCATAGTCCATACT 58.687 45.455 0.00 0.00 39.91 2.12
742 744 3.760580 AGCTGCTTCCATAGTCCATAC 57.239 47.619 0.00 0.00 0.00 2.39
743 745 5.147767 TCTAAGCTGCTTCCATAGTCCATA 58.852 41.667 19.62 0.00 0.00 2.74
744 746 3.969976 TCTAAGCTGCTTCCATAGTCCAT 59.030 43.478 19.62 0.00 0.00 3.41
745 747 3.374764 TCTAAGCTGCTTCCATAGTCCA 58.625 45.455 19.62 0.00 0.00 4.02
746 748 3.801983 GCTCTAAGCTGCTTCCATAGTCC 60.802 52.174 19.62 3.06 38.45 3.85
747 749 3.181471 TGCTCTAAGCTGCTTCCATAGTC 60.181 47.826 19.62 7.79 42.97 2.59
748 750 2.768527 TGCTCTAAGCTGCTTCCATAGT 59.231 45.455 19.62 0.00 42.97 2.12
749 751 3.465742 TGCTCTAAGCTGCTTCCATAG 57.534 47.619 19.62 10.77 42.97 2.23
750 752 3.135348 ACATGCTCTAAGCTGCTTCCATA 59.865 43.478 19.62 0.00 42.97 2.74
751 753 2.092538 ACATGCTCTAAGCTGCTTCCAT 60.093 45.455 19.62 13.67 42.97 3.41
752 754 1.280133 ACATGCTCTAAGCTGCTTCCA 59.720 47.619 19.62 12.04 42.97 3.53
757 759 2.544686 CTGATCACATGCTCTAAGCTGC 59.455 50.000 0.00 0.00 42.97 5.25
759 761 4.262549 GGATCTGATCACATGCTCTAAGCT 60.263 45.833 18.64 0.00 42.97 3.74
762 764 3.553715 GCGGATCTGATCACATGCTCTAA 60.554 47.826 18.64 0.00 0.00 2.10
765 767 1.146637 GCGGATCTGATCACATGCTC 58.853 55.000 18.64 0.00 0.00 4.26
812 827 3.194116 AGGGAAGTAAAGCGATAACGTGA 59.806 43.478 0.00 0.00 41.98 4.35
823 838 5.053145 CAGTGCTGCTATAGGGAAGTAAAG 58.947 45.833 1.04 0.00 0.00 1.85
856 947 0.517316 CACTAGGTGCGGCAAGAAAC 59.483 55.000 3.23 0.00 0.00 2.78
868 959 0.324830 GGGAGAGCCTCACACTAGGT 60.325 60.000 0.00 0.00 39.02 3.08
871 962 1.561643 CAAGGGAGAGCCTCACACTA 58.438 55.000 0.00 0.00 36.16 2.74
880 971 1.477740 GGATAAAGGGCAAGGGAGAGC 60.478 57.143 0.00 0.00 0.00 4.09
881 972 2.105649 GAGGATAAAGGGCAAGGGAGAG 59.894 54.545 0.00 0.00 0.00 3.20
882 973 2.127708 GAGGATAAAGGGCAAGGGAGA 58.872 52.381 0.00 0.00 0.00 3.71
883 974 1.846439 TGAGGATAAAGGGCAAGGGAG 59.154 52.381 0.00 0.00 0.00 4.30
884 975 1.979809 TGAGGATAAAGGGCAAGGGA 58.020 50.000 0.00 0.00 0.00 4.20
885 976 2.291540 TGTTGAGGATAAAGGGCAAGGG 60.292 50.000 0.00 0.00 0.00 3.95
886 977 3.085952 TGTTGAGGATAAAGGGCAAGG 57.914 47.619 0.00 0.00 0.00 3.61
887 978 3.633986 GGATGTTGAGGATAAAGGGCAAG 59.366 47.826 0.00 0.00 0.00 4.01
888 979 3.011144 TGGATGTTGAGGATAAAGGGCAA 59.989 43.478 0.00 0.00 0.00 4.52
889 980 2.580322 TGGATGTTGAGGATAAAGGGCA 59.420 45.455 0.00 0.00 0.00 5.36
890 981 2.952310 GTGGATGTTGAGGATAAAGGGC 59.048 50.000 0.00 0.00 0.00 5.19
891 982 3.203040 AGGTGGATGTTGAGGATAAAGGG 59.797 47.826 0.00 0.00 0.00 3.95
897 988 3.198635 CACACTAGGTGGATGTTGAGGAT 59.801 47.826 0.00 0.00 44.04 3.24
948 1039 7.326968 AGACTTCTTCCTTTTCTTTGTGAAG 57.673 36.000 0.00 0.00 35.89 3.02
1074 1165 1.079127 GACCAAGCTTAGCTCGGCA 60.079 57.895 11.64 0.00 35.93 5.69
1083 1174 0.610232 GCACTCCCATGACCAAGCTT 60.610 55.000 0.00 0.00 0.00 3.74
1092 1183 3.327172 AGATATCCTTCTGCACTCCCATG 59.673 47.826 0.00 0.00 0.00 3.66
1098 1189 4.904251 ACATACCAGATATCCTTCTGCACT 59.096 41.667 0.00 0.00 41.50 4.40
1148 1969 0.980231 TGCACCAGGTTGCCCTTTTT 60.980 50.000 10.46 0.00 42.25 1.94
1149 1970 0.763986 ATGCACCAGGTTGCCCTTTT 60.764 50.000 10.46 0.00 42.25 2.27
1150 1971 1.152269 ATGCACCAGGTTGCCCTTT 60.152 52.632 10.46 0.00 42.25 3.11
1151 1972 1.909781 CATGCACCAGGTTGCCCTT 60.910 57.895 10.46 0.00 42.25 3.95
1152 1973 1.788518 TACATGCACCAGGTTGCCCT 61.789 55.000 10.46 0.00 42.25 5.19
1153 1974 1.304052 TACATGCACCAGGTTGCCC 60.304 57.895 10.46 0.00 42.25 5.36
1154 1975 1.937546 GCTACATGCACCAGGTTGCC 61.938 60.000 10.46 0.00 39.88 4.52
1155 1976 0.962356 AGCTACATGCACCAGGTTGC 60.962 55.000 8.03 8.03 44.17 4.17
1156 1977 1.089920 GAGCTACATGCACCAGGTTG 58.910 55.000 0.00 0.00 45.94 3.77
1157 1978 3.558674 GAGCTACATGCACCAGGTT 57.441 52.632 0.00 0.00 45.94 3.50
1182 2003 4.785453 CTTCCCTGGACCCTGCGC 62.785 72.222 0.00 0.00 0.00 6.09
1183 2004 4.101448 CCTTCCCTGGACCCTGCG 62.101 72.222 0.00 0.00 0.00 5.18
1184 2005 3.732849 CCCTTCCCTGGACCCTGC 61.733 72.222 0.00 0.00 0.00 4.85
1185 2006 2.204151 ACCCTTCCCTGGACCCTG 60.204 66.667 0.00 0.00 0.00 4.45
1186 2007 2.125225 GACCCTTCCCTGGACCCT 59.875 66.667 0.00 0.00 0.00 4.34
1187 2008 3.015753 GGACCCTTCCCTGGACCC 61.016 72.222 0.00 0.00 35.57 4.46
1188 2009 3.400054 CGGACCCTTCCCTGGACC 61.400 72.222 0.00 0.00 38.99 4.46
1189 2010 2.284405 TCGGACCCTTCCCTGGAC 60.284 66.667 0.00 0.00 38.99 4.02
1190 2011 2.284405 GTCGGACCCTTCCCTGGA 60.284 66.667 0.00 0.00 38.99 3.86
1191 2012 3.400054 GGTCGGACCCTTCCCTGG 61.400 72.222 16.55 0.00 38.99 4.45
1192 2013 1.562672 AATGGTCGGACCCTTCCCTG 61.563 60.000 23.81 0.00 38.99 4.45
1193 2014 0.845102 AAATGGTCGGACCCTTCCCT 60.845 55.000 23.81 3.58 38.99 4.20
1194 2015 0.039180 AAAATGGTCGGACCCTTCCC 59.961 55.000 23.81 0.00 38.99 3.97
1195 2016 1.173913 CAAAATGGTCGGACCCTTCC 58.826 55.000 23.81 0.00 37.50 3.46
1196 2017 1.173913 CCAAAATGGTCGGACCCTTC 58.826 55.000 23.81 0.00 37.50 3.46
1197 2018 0.251608 CCCAAAATGGTCGGACCCTT 60.252 55.000 23.81 17.44 37.50 3.95
1198 2019 1.382629 CCCAAAATGGTCGGACCCT 59.617 57.895 23.81 12.03 37.50 4.34
1199 2020 0.963856 GACCCAAAATGGTCGGACCC 60.964 60.000 23.81 7.15 44.98 4.46
1200 2021 2.563297 GACCCAAAATGGTCGGACC 58.437 57.895 20.36 20.36 44.98 4.46
1206 2027 4.162698 TGCGTACTATAGACCCAAAATGGT 59.837 41.667 6.78 0.00 42.79 3.55
1207 2028 4.699637 TGCGTACTATAGACCCAAAATGG 58.300 43.478 6.78 0.00 37.25 3.16
1208 2029 4.211374 GCTGCGTACTATAGACCCAAAATG 59.789 45.833 6.78 0.00 0.00 2.32
1209 2030 4.377897 GCTGCGTACTATAGACCCAAAAT 58.622 43.478 6.78 0.00 0.00 1.82
1210 2031 3.431207 GGCTGCGTACTATAGACCCAAAA 60.431 47.826 6.78 0.00 0.00 2.44
1211 2032 2.101917 GGCTGCGTACTATAGACCCAAA 59.898 50.000 6.78 0.00 0.00 3.28
1212 2033 1.684983 GGCTGCGTACTATAGACCCAA 59.315 52.381 6.78 0.00 0.00 4.12
1213 2034 1.133575 AGGCTGCGTACTATAGACCCA 60.134 52.381 6.78 0.00 0.00 4.51
1214 2035 1.618487 AGGCTGCGTACTATAGACCC 58.382 55.000 6.78 0.00 0.00 4.46
1215 2036 3.552478 GGAAAGGCTGCGTACTATAGACC 60.552 52.174 6.78 0.00 0.00 3.85
1216 2037 3.552478 GGGAAAGGCTGCGTACTATAGAC 60.552 52.174 6.78 0.00 0.00 2.59
1217 2038 2.626743 GGGAAAGGCTGCGTACTATAGA 59.373 50.000 6.78 0.00 0.00 1.98
1218 2039 2.628657 AGGGAAAGGCTGCGTACTATAG 59.371 50.000 0.00 0.00 0.00 1.31
1219 2040 2.674420 AGGGAAAGGCTGCGTACTATA 58.326 47.619 0.00 0.00 0.00 1.31
1220 2041 1.497161 AGGGAAAGGCTGCGTACTAT 58.503 50.000 0.00 0.00 0.00 2.12
1221 2042 1.753073 GTAGGGAAAGGCTGCGTACTA 59.247 52.381 0.00 0.00 34.81 1.82
1222 2043 0.535797 GTAGGGAAAGGCTGCGTACT 59.464 55.000 0.00 0.00 34.81 2.73
1223 2044 0.248289 TGTAGGGAAAGGCTGCGTAC 59.752 55.000 0.00 0.00 37.28 3.67
1224 2045 1.134521 CATGTAGGGAAAGGCTGCGTA 60.135 52.381 0.00 0.00 0.00 4.42
1225 2046 0.392998 CATGTAGGGAAAGGCTGCGT 60.393 55.000 0.00 0.00 0.00 5.24
1226 2047 0.107703 TCATGTAGGGAAAGGCTGCG 60.108 55.000 0.00 0.00 0.00 5.18
1227 2048 1.065126 AGTCATGTAGGGAAAGGCTGC 60.065 52.381 0.00 0.00 0.00 5.25
1228 2049 2.503356 AGAGTCATGTAGGGAAAGGCTG 59.497 50.000 0.00 0.00 0.00 4.85
1229 2050 2.839228 AGAGTCATGTAGGGAAAGGCT 58.161 47.619 0.00 0.00 0.00 4.58
1230 2051 4.965200 ATAGAGTCATGTAGGGAAAGGC 57.035 45.455 0.00 0.00 0.00 4.35
1231 2052 9.853177 AAATTAATAGAGTCATGTAGGGAAAGG 57.147 33.333 0.00 0.00 0.00 3.11
1313 2144 3.249559 GGGATGAGATCTGAAACATTCGC 59.750 47.826 0.00 0.00 0.00 4.70
1333 2164 7.167535 AGTAATGGAAAATTCAAACAATGGGG 58.832 34.615 0.00 0.00 0.00 4.96
1357 2192 4.571919 ACAAAATTTGCCACATCCATGAG 58.428 39.130 5.52 0.00 0.00 2.90
1378 2213 1.864750 GTGCGCGACAATGCATGAC 60.865 57.895 12.10 0.00 43.96 3.06
1413 2252 8.464404 AGATTGAGAACAACCATTATTGTCATG 58.536 33.333 0.00 0.00 42.01 3.07
1481 2341 0.099968 CCAAGAATGCCTGCATCGTG 59.900 55.000 4.89 7.56 35.31 4.35
1506 2366 3.126831 CTCTGTTCTTCGTTGCTTCAGT 58.873 45.455 0.00 0.00 0.00 3.41
1562 2422 4.398358 TCTTCTATGTTGTAGGACAGGTCG 59.602 45.833 0.00 0.00 32.19 4.79
1739 2599 3.197766 TGGTCGTTGATGCCTCTATCTTT 59.802 43.478 0.00 0.00 0.00 2.52
1751 2611 1.691976 TCCTTGTCACTGGTCGTTGAT 59.308 47.619 0.00 0.00 0.00 2.57
1824 2684 6.575162 CTTTGTAAAGCCCACAAGTTCTAT 57.425 37.500 0.00 0.00 37.22 1.98
1983 2847 6.069684 AGCACAACAAGAGAAATTCTTCAG 57.930 37.500 0.00 0.00 44.34 3.02
1994 2858 2.880268 TGTGATCCAAGCACAACAAGAG 59.120 45.455 0.00 0.00 42.75 2.85
2040 2904 5.942236 GCCTGATCATATCCTTGAGCATTTA 59.058 40.000 0.00 0.00 40.86 1.40
2155 3019 8.715190 AAGGTACCTCTTATCCTTAATCTCTC 57.285 38.462 16.64 0.00 38.34 3.20
2205 3069 4.897509 TTATCCACCTCCATGCATCTAG 57.102 45.455 0.00 0.00 0.00 2.43
2281 3146 0.676466 TTGCTAAGCCCACATCACGG 60.676 55.000 0.00 0.00 0.00 4.94
2403 3269 8.614469 TGGTCTTGAAGTTTTCATTTGTTTTT 57.386 26.923 0.00 0.00 39.84 1.94
2410 3276 8.463930 TCAACTATGGTCTTGAAGTTTTCATT 57.536 30.769 0.00 0.00 39.84 2.57
2439 3305 7.117956 GGTAAACAGCCACACTTTTTAACAAAA 59.882 33.333 0.00 0.00 37.89 2.44
2440 3306 6.590677 GGTAAACAGCCACACTTTTTAACAAA 59.409 34.615 0.00 0.00 37.89 2.83
2457 3323 3.270877 GAGTATGGCCAGTGGTAAACAG 58.729 50.000 13.05 0.00 0.00 3.16
2508 3375 3.961408 AGACGTGCTCCCACTCTATTATT 59.039 43.478 0.00 0.00 39.86 1.40
2566 3433 2.159142 CCATCTTCATTGCTTCAAGGCC 60.159 50.000 0.00 0.00 0.00 5.19
2721 3590 1.065410 ATGTTCACCCCAGTCCCACA 61.065 55.000 0.00 0.00 0.00 4.17
2829 3698 4.026558 CACAATATCATGGACTCGACAACG 60.027 45.833 0.00 0.00 41.26 4.10
2921 3793 1.031029 GGAAGGTCTCGTCCGTAGCT 61.031 60.000 0.00 0.00 32.23 3.32
2930 3802 2.014857 TCTACATGTCGGAAGGTCTCG 58.985 52.381 0.00 0.00 0.00 4.04
3001 3873 4.161565 TCTCACCAAACACAGTTACTGACT 59.838 41.667 20.07 0.00 39.89 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.