Multiple sequence alignment - TraesCS4A01G447700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G447700 chr4A 100.000 5121 0 0 1 5121 714519203 714524323 0.000000e+00 9457.0
1 TraesCS4A01G447700 chr4A 90.400 2500 196 22 1210 3682 714564901 714567383 0.000000e+00 3247.0
2 TraesCS4A01G447700 chr4A 88.364 2372 243 21 1587 3950 714764652 714766998 0.000000e+00 2820.0
3 TraesCS4A01G447700 chr4A 86.570 2286 301 6 1668 3950 714430939 714433221 0.000000e+00 2516.0
4 TraesCS4A01G447700 chr4A 86.998 1892 229 16 1626 3509 715354584 715356466 0.000000e+00 2115.0
5 TraesCS4A01G447700 chr4A 81.865 2338 382 29 1635 3954 715006740 715009053 0.000000e+00 1930.0
6 TraesCS4A01G447700 chr4A 93.571 700 38 3 1 693 500136845 500137544 0.000000e+00 1037.0
7 TraesCS4A01G447700 chr4A 93.020 702 36 10 1 693 125381572 125380875 0.000000e+00 1013.0
8 TraesCS4A01G447700 chr4A 85.924 682 81 7 3951 4630 714433254 714433922 0.000000e+00 713.0
9 TraesCS4A01G447700 chr4A 89.399 566 60 0 3951 4516 715100757 715101322 0.000000e+00 713.0
10 TraesCS4A01G447700 chr4A 86.837 547 70 2 3405 3950 714731485 714732030 1.220000e-170 610.0
11 TraesCS4A01G447700 chr4A 88.487 304 29 5 834 1134 714757806 714758106 3.770000e-96 363.0
12 TraesCS4A01G447700 chr4A 96.569 204 6 1 4918 5121 731883328 731883530 2.280000e-88 337.0
13 TraesCS4A01G447700 chr4A 87.013 308 14 9 830 1134 715297248 715297532 1.780000e-84 324.0
14 TraesCS4A01G447700 chr4A 87.879 264 26 5 874 1134 715353929 715354189 6.440000e-79 305.0
15 TraesCS4A01G447700 chr4A 80.140 428 34 22 4511 4889 715106374 715106799 6.530000e-69 272.0
16 TraesCS4A01G447700 chr4A 88.360 189 18 2 986 1174 714564580 714564764 1.860000e-54 224.0
17 TraesCS4A01G447700 chr4A 83.696 184 23 5 4457 4639 714590421 714590598 3.170000e-37 167.0
18 TraesCS4A01G447700 chr4A 93.333 105 7 0 3846 3950 714567385 714567489 6.870000e-34 156.0
19 TraesCS4A01G447700 chr4A 91.667 72 6 0 4856 4927 714434156 714434227 3.260000e-17 100.0
20 TraesCS4A01G447700 chr7D 85.985 3061 376 38 1668 4707 18003705 18000677 0.000000e+00 3227.0
21 TraesCS4A01G447700 chr7D 82.353 2295 381 20 1668 3950 18108006 18105724 0.000000e+00 1973.0
22 TraesCS4A01G447700 chr7D 92.429 700 37 8 1 693 538821791 538822481 0.000000e+00 985.0
23 TraesCS4A01G447700 chr7D 86.245 727 77 16 4000 4714 18103143 18102428 0.000000e+00 767.0
24 TraesCS4A01G447700 chr7D 83.904 789 92 21 3951 4723 18105691 18104922 0.000000e+00 721.0
25 TraesCS4A01G447700 chr7D 83.442 616 52 23 4286 4862 18008266 18007662 1.260000e-145 527.0
26 TraesCS4A01G447700 chr7A 87.989 2273 269 4 1680 3950 17425350 17423080 0.000000e+00 2682.0
27 TraesCS4A01G447700 chr7A 87.648 2275 273 5 1680 3950 18036857 18034587 0.000000e+00 2638.0
28 TraesCS4A01G447700 chr7A 87.360 2318 258 23 1636 3948 18316141 18318428 0.000000e+00 2625.0
29 TraesCS4A01G447700 chr7A 84.926 1015 84 37 3951 4927 17845725 17844742 0.000000e+00 963.0
30 TraesCS4A01G447700 chr7A 83.727 762 76 17 3951 4707 17796867 17796149 0.000000e+00 676.0
31 TraesCS4A01G447700 chr7A 87.612 557 66 1 3951 4507 17390078 17389525 1.200000e-180 643.0
32 TraesCS4A01G447700 chr7A 90.265 452 42 2 3951 4401 18434646 18435096 1.590000e-164 590.0
33 TraesCS4A01G447700 chr7A 84.862 436 29 17 704 1134 17395315 17394912 6.170000e-109 405.0
34 TraesCS4A01G447700 chr7A 92.969 128 5 4 996 1122 17867727 17867603 3.150000e-42 183.0
35 TraesCS4A01G447700 chr7A 90.984 122 11 0 1001 1122 18037260 18037139 1.140000e-36 165.0
36 TraesCS4A01G447700 chrUn 89.552 1675 156 14 1590 3258 340741095 340739434 0.000000e+00 2106.0
37 TraesCS4A01G447700 chrUn 81.990 2332 390 28 1636 3950 89851478 89853796 0.000000e+00 1953.0
38 TraesCS4A01G447700 chrUn 88.993 854 71 11 3951 4781 89853829 89854682 0.000000e+00 1035.0
39 TraesCS4A01G447700 chrUn 87.020 547 69 2 3405 3950 327046112 327045567 2.620000e-172 616.0
40 TraesCS4A01G447700 chrUn 88.487 304 29 5 834 1134 341583918 341584218 3.770000e-96 363.0
41 TraesCS4A01G447700 chrUn 96.078 204 8 0 4918 5121 48722255 48722458 2.950000e-87 333.0
42 TraesCS4A01G447700 chrUn 96.078 204 8 0 4918 5121 271909252 271909049 2.950000e-87 333.0
43 TraesCS4A01G447700 chrUn 81.215 362 34 19 800 1134 50595095 50594741 1.410000e-65 261.0
44 TraesCS4A01G447700 chr5D 94.143 700 30 4 1 693 48658789 48658094 0.000000e+00 1055.0
45 TraesCS4A01G447700 chr5D 93.172 703 32 7 4 693 482146438 482145739 0.000000e+00 1018.0
46 TraesCS4A01G447700 chr5D 92.571 700 36 8 1 693 565310038 565309348 0.000000e+00 990.0
47 TraesCS4A01G447700 chr7B 94.118 697 33 4 1 690 664941221 664941916 0.000000e+00 1053.0
48 TraesCS4A01G447700 chr7B 96.569 204 6 1 4918 5121 693848759 693848961 2.280000e-88 337.0
49 TraesCS4A01G447700 chr5B 92.877 702 37 9 1 693 87916285 87916982 0.000000e+00 1007.0
50 TraesCS4A01G447700 chr5B 97.938 194 4 0 4928 5121 58836403 58836210 2.280000e-88 337.0
51 TraesCS4A01G447700 chr5B 96.078 204 8 0 4918 5121 688375144 688374941 2.950000e-87 333.0
52 TraesCS4A01G447700 chr6D 92.582 701 36 8 1 693 55131855 55131163 0.000000e+00 992.0
53 TraesCS4A01G447700 chr6B 97.059 204 6 0 4918 5121 30337121 30336918 1.370000e-90 344.0
54 TraesCS4A01G447700 chr6B 76.899 316 32 24 4649 4927 114734075 114733764 1.920000e-29 141.0
55 TraesCS4A01G447700 chr1B 96.569 204 6 1 4918 5121 162177658 162177456 2.280000e-88 337.0
56 TraesCS4A01G447700 chr2B 96.078 204 6 2 4918 5121 38069301 38069100 1.060000e-86 331.0
57 TraesCS4A01G447700 chr2B 78.019 323 29 25 4643 4927 50224648 50224966 1.140000e-36 165.0
58 TraesCS4A01G447700 chr4B 77.778 324 28 29 4643 4927 455978298 455978616 5.310000e-35 159.0
59 TraesCS4A01G447700 chr6A 85.714 84 9 2 4640 4720 320933253 320933170 9.140000e-13 86.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G447700 chr4A 714519203 714524323 5120 False 9457.000000 9457 100.000000 1 5121 1 chr4A.!!$F2 5120
1 TraesCS4A01G447700 chr4A 714764652 714766998 2346 False 2820.000000 2820 88.364000 1587 3950 1 chr4A.!!$F6 2363
2 TraesCS4A01G447700 chr4A 715006740 715009053 2313 False 1930.000000 1930 81.865000 1635 3954 1 chr4A.!!$F7 2319
3 TraesCS4A01G447700 chr4A 715353929 715356466 2537 False 1210.000000 2115 87.438500 874 3509 2 chr4A.!!$F14 2635
4 TraesCS4A01G447700 chr4A 714564580 714567489 2909 False 1209.000000 3247 90.697667 986 3950 3 chr4A.!!$F13 2964
5 TraesCS4A01G447700 chr4A 714430939 714434227 3288 False 1109.666667 2516 88.053667 1668 4927 3 chr4A.!!$F12 3259
6 TraesCS4A01G447700 chr4A 500136845 500137544 699 False 1037.000000 1037 93.571000 1 693 1 chr4A.!!$F1 692
7 TraesCS4A01G447700 chr4A 125380875 125381572 697 True 1013.000000 1013 93.020000 1 693 1 chr4A.!!$R1 692
8 TraesCS4A01G447700 chr4A 715100757 715101322 565 False 713.000000 713 89.399000 3951 4516 1 chr4A.!!$F8 565
9 TraesCS4A01G447700 chr4A 714731485 714732030 545 False 610.000000 610 86.837000 3405 3950 1 chr4A.!!$F4 545
10 TraesCS4A01G447700 chr7D 18000677 18008266 7589 True 1877.000000 3227 84.713500 1668 4862 2 chr7D.!!$R1 3194
11 TraesCS4A01G447700 chr7D 18102428 18108006 5578 True 1153.666667 1973 84.167333 1668 4723 3 chr7D.!!$R2 3055
12 TraesCS4A01G447700 chr7D 538821791 538822481 690 False 985.000000 985 92.429000 1 693 1 chr7D.!!$F1 692
13 TraesCS4A01G447700 chr7A 17423080 17425350 2270 True 2682.000000 2682 87.989000 1680 3950 1 chr7A.!!$R3 2270
14 TraesCS4A01G447700 chr7A 18316141 18318428 2287 False 2625.000000 2625 87.360000 1636 3948 1 chr7A.!!$F1 2312
15 TraesCS4A01G447700 chr7A 18034587 18037260 2673 True 1401.500000 2638 89.316000 1001 3950 2 chr7A.!!$R7 2949
16 TraesCS4A01G447700 chr7A 17844742 17845725 983 True 963.000000 963 84.926000 3951 4927 1 chr7A.!!$R5 976
17 TraesCS4A01G447700 chr7A 17796149 17796867 718 True 676.000000 676 83.727000 3951 4707 1 chr7A.!!$R4 756
18 TraesCS4A01G447700 chr7A 17389525 17390078 553 True 643.000000 643 87.612000 3951 4507 1 chr7A.!!$R1 556
19 TraesCS4A01G447700 chrUn 340739434 340741095 1661 True 2106.000000 2106 89.552000 1590 3258 1 chrUn.!!$R4 1668
20 TraesCS4A01G447700 chrUn 89851478 89854682 3204 False 1494.000000 1953 85.491500 1636 4781 2 chrUn.!!$F3 3145
21 TraesCS4A01G447700 chrUn 327045567 327046112 545 True 616.000000 616 87.020000 3405 3950 1 chrUn.!!$R3 545
22 TraesCS4A01G447700 chr5D 48658094 48658789 695 True 1055.000000 1055 94.143000 1 693 1 chr5D.!!$R1 692
23 TraesCS4A01G447700 chr5D 482145739 482146438 699 True 1018.000000 1018 93.172000 4 693 1 chr5D.!!$R2 689
24 TraesCS4A01G447700 chr5D 565309348 565310038 690 True 990.000000 990 92.571000 1 693 1 chr5D.!!$R3 692
25 TraesCS4A01G447700 chr7B 664941221 664941916 695 False 1053.000000 1053 94.118000 1 690 1 chr7B.!!$F1 689
26 TraesCS4A01G447700 chr5B 87916285 87916982 697 False 1007.000000 1007 92.877000 1 693 1 chr5B.!!$F1 692
27 TraesCS4A01G447700 chr6D 55131163 55131855 692 True 992.000000 992 92.582000 1 693 1 chr6D.!!$R1 692

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
832 849 0.109179 GGCAATGCAGTGCGATTCAA 60.109 50.000 30.28 0.0 45.91 2.69 F
1519 1677 0.555769 TGTTGGGGTTCTTGCCTTCT 59.444 50.000 0.00 0.0 0.00 2.85 F
1520 1678 1.063266 TGTTGGGGTTCTTGCCTTCTT 60.063 47.619 0.00 0.0 0.00 2.52 F
2851 5792 1.071542 TGGTTGCCGTCTCATCTCAAA 59.928 47.619 0.00 0.0 0.00 2.69 F
3731 6675 0.178992 TGTGAGGGTGCCAAAAGGAG 60.179 55.000 0.00 0.0 0.00 3.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2831 5772 0.684535 TTGAGATGAGACGGCAACCA 59.315 50.000 0.00 0.00 0.00 3.67 R
2927 5868 1.628846 GGCTCTAACAAACCCCTCAGA 59.371 52.381 0.00 0.00 0.00 3.27 R
3004 5945 2.027285 TGAGGGTTGAATCATGCTTCGA 60.027 45.455 4.92 0.05 0.00 3.71 R
3842 6786 0.105964 TTGCTGGCCCCTTGTGTTAA 60.106 50.000 0.00 0.00 0.00 2.01 R
4991 10564 0.036010 AGGCACTCGCAGCTGTTTAT 60.036 50.000 16.64 0.00 41.24 1.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
416 420 2.885861 CGCCGCCACTAGAGAAGT 59.114 61.111 0.00 0.00 39.81 3.01
697 714 3.909258 GACGCTCGCGGGAGAACAA 62.909 63.158 31.36 0.00 43.27 2.83
698 715 2.736995 CGCTCGCGGGAGAACAAA 60.737 61.111 31.36 0.00 43.27 2.83
699 716 2.314647 CGCTCGCGGGAGAACAAAA 61.315 57.895 31.36 0.00 43.27 2.44
700 717 1.206831 GCTCGCGGGAGAACAAAAC 59.793 57.895 31.36 9.28 43.27 2.43
701 718 1.503818 GCTCGCGGGAGAACAAAACA 61.504 55.000 31.36 0.00 43.27 2.83
702 719 1.156736 CTCGCGGGAGAACAAAACAT 58.843 50.000 24.08 0.00 43.27 2.71
705 722 1.202031 CGCGGGAGAACAAAACATAGC 60.202 52.381 0.00 0.00 0.00 2.97
706 723 1.810151 GCGGGAGAACAAAACATAGCA 59.190 47.619 0.00 0.00 0.00 3.49
708 725 2.159517 CGGGAGAACAAAACATAGCAGC 60.160 50.000 0.00 0.00 0.00 5.25
709 726 3.084786 GGGAGAACAAAACATAGCAGCT 58.915 45.455 0.00 0.00 0.00 4.24
710 727 3.119708 GGGAGAACAAAACATAGCAGCTG 60.120 47.826 10.11 10.11 0.00 4.24
712 729 2.886523 AGAACAAAACATAGCAGCTGCA 59.113 40.909 38.24 24.73 45.16 4.41
714 731 2.233271 ACAAAACATAGCAGCTGCACT 58.767 42.857 38.24 22.64 45.16 4.40
716 733 3.438087 ACAAAACATAGCAGCTGCACTAG 59.562 43.478 38.24 25.90 45.16 2.57
717 734 3.340814 AAACATAGCAGCTGCACTAGT 57.659 42.857 38.24 26.52 45.16 2.57
718 735 2.306341 ACATAGCAGCTGCACTAGTG 57.694 50.000 38.24 27.57 45.16 2.74
728 745 4.373116 CACTAGTGCGCCCACCGT 62.373 66.667 10.54 0.00 43.09 4.83
729 746 3.622826 ACTAGTGCGCCCACCGTT 61.623 61.111 4.18 0.00 43.09 4.44
730 747 3.118454 CTAGTGCGCCCACCGTTG 61.118 66.667 4.18 0.00 43.09 4.10
745 762 4.329545 TTGCTGCCCGTCCAGTCC 62.330 66.667 0.00 0.00 35.28 3.85
747 764 4.101448 GCTGCCCGTCCAGTCCAT 62.101 66.667 0.00 0.00 35.28 3.41
748 765 2.124983 CTGCCCGTCCAGTCCATG 60.125 66.667 0.00 0.00 0.00 3.66
749 766 4.408821 TGCCCGTCCAGTCCATGC 62.409 66.667 0.00 0.00 0.00 4.06
751 768 2.436646 CCCGTCCAGTCCATGCAC 60.437 66.667 0.00 0.00 0.00 4.57
752 769 2.347114 CCGTCCAGTCCATGCACA 59.653 61.111 0.00 0.00 0.00 4.57
754 771 1.300971 CCGTCCAGTCCATGCACAAG 61.301 60.000 0.00 0.00 0.00 3.16
756 773 1.303561 TCCAGTCCATGCACAAGCC 60.304 57.895 0.00 0.00 41.13 4.35
758 775 2.036256 AGTCCATGCACAAGCCCC 59.964 61.111 0.00 0.00 41.13 5.80
759 776 2.283101 GTCCATGCACAAGCCCCA 60.283 61.111 0.00 0.00 41.13 4.96
760 777 1.907807 GTCCATGCACAAGCCCCAA 60.908 57.895 0.00 0.00 41.13 4.12
761 778 1.907807 TCCATGCACAAGCCCCAAC 60.908 57.895 0.00 0.00 41.13 3.77
763 780 2.990967 ATGCACAAGCCCCAACGG 60.991 61.111 0.00 0.00 41.13 4.44
777 794 2.941428 CCAACGGGACAACTATTTTGC 58.059 47.619 0.00 0.00 35.59 3.68
779 796 3.564511 CAACGGGACAACTATTTTGCAG 58.435 45.455 0.00 0.00 0.00 4.41
784 801 3.568538 GGACAACTATTTTGCAGCAGTG 58.431 45.455 0.00 0.00 0.00 3.66
785 802 3.568538 GACAACTATTTTGCAGCAGTGG 58.431 45.455 0.00 0.00 0.00 4.00
786 803 2.288395 ACAACTATTTTGCAGCAGTGGC 60.288 45.455 0.00 0.00 41.61 5.01
800 817 4.974103 GCAGTGGCTACTTATATTGTCG 57.026 45.455 0.00 0.00 34.07 4.35
802 819 3.741344 CAGTGGCTACTTATATTGTCGGC 59.259 47.826 0.00 0.00 34.07 5.54
804 821 3.988517 GTGGCTACTTATATTGTCGGCTC 59.011 47.826 0.00 2.62 0.00 4.70
808 825 5.348997 GGCTACTTATATTGTCGGCTCAATC 59.651 44.000 7.77 0.00 38.68 2.67
811 828 5.680619 ACTTATATTGTCGGCTCAATCCAA 58.319 37.500 7.77 4.28 38.68 3.53
813 830 6.205464 ACTTATATTGTCGGCTCAATCCAATG 59.795 38.462 7.77 2.61 38.68 2.82
814 831 1.462616 TTGTCGGCTCAATCCAATGG 58.537 50.000 0.00 0.00 0.00 3.16
815 832 1.031571 TGTCGGCTCAATCCAATGGC 61.032 55.000 0.00 0.00 0.00 4.40
816 833 1.031571 GTCGGCTCAATCCAATGGCA 61.032 55.000 0.00 0.00 0.00 4.92
817 834 0.323269 TCGGCTCAATCCAATGGCAA 60.323 50.000 0.00 0.00 0.00 4.52
820 837 1.578583 GCTCAATCCAATGGCAATGC 58.421 50.000 0.00 0.00 0.00 3.56
821 838 1.134640 GCTCAATCCAATGGCAATGCA 60.135 47.619 7.79 0.00 0.00 3.96
823 840 2.167693 CTCAATCCAATGGCAATGCAGT 59.832 45.455 7.79 0.00 0.00 4.40
824 841 2.093921 TCAATCCAATGGCAATGCAGTG 60.094 45.455 10.38 10.38 0.00 3.66
825 842 0.177141 ATCCAATGGCAATGCAGTGC 59.823 50.000 29.91 29.91 44.14 4.40
827 844 1.213275 CAATGGCAATGCAGTGCGA 59.787 52.632 30.28 27.92 45.91 5.10
828 845 0.179121 CAATGGCAATGCAGTGCGAT 60.179 50.000 30.28 28.84 45.91 4.58
831 848 1.242665 TGGCAATGCAGTGCGATTCA 61.243 50.000 30.28 20.41 45.91 2.57
832 849 0.109179 GGCAATGCAGTGCGATTCAA 60.109 50.000 30.28 0.00 45.91 2.69
833 850 1.470285 GGCAATGCAGTGCGATTCAAT 60.470 47.619 30.28 0.00 45.91 2.57
834 851 2.264813 GCAATGCAGTGCGATTCAATT 58.735 42.857 24.52 0.14 34.21 2.32
835 852 3.437428 GCAATGCAGTGCGATTCAATTA 58.563 40.909 24.52 0.00 34.21 1.40
836 853 4.046462 GCAATGCAGTGCGATTCAATTAT 58.954 39.130 24.52 0.00 34.21 1.28
838 855 5.555631 GCAATGCAGTGCGATTCAATTATTG 60.556 40.000 24.52 11.86 34.21 1.90
839 856 4.031418 TGCAGTGCGATTCAATTATTGG 57.969 40.909 11.20 0.00 0.00 3.16
841 858 4.338964 TGCAGTGCGATTCAATTATTGGAT 59.661 37.500 11.20 1.25 0.00 3.41
842 859 5.530543 TGCAGTGCGATTCAATTATTGGATA 59.469 36.000 11.20 0.00 0.00 2.59
843 860 6.082338 GCAGTGCGATTCAATTATTGGATAG 58.918 40.000 0.00 3.66 0.00 2.08
844 861 6.073058 GCAGTGCGATTCAATTATTGGATAGA 60.073 38.462 9.96 0.00 0.00 1.98
847 864 5.120674 TGCGATTCAATTATTGGATAGAGCG 59.879 40.000 9.96 5.78 30.77 5.03
849 866 5.063944 CGATTCAATTATTGGATAGAGCGGG 59.936 44.000 5.02 0.00 0.00 6.13
850 867 4.286297 TCAATTATTGGATAGAGCGGGG 57.714 45.455 5.02 0.00 0.00 5.73
852 869 2.409064 TTATTGGATAGAGCGGGGGA 57.591 50.000 0.00 0.00 0.00 4.81
853 870 1.938585 TATTGGATAGAGCGGGGGAG 58.061 55.000 0.00 0.00 0.00 4.30
855 872 0.759436 TTGGATAGAGCGGGGGAGAC 60.759 60.000 0.00 0.00 0.00 3.36
856 873 1.154221 GGATAGAGCGGGGGAGACT 59.846 63.158 0.00 0.00 0.00 3.24
859 876 2.589610 ATAGAGCGGGGGAGACTGCA 62.590 60.000 0.00 0.00 45.17 4.41
860 877 4.154347 GAGCGGGGGAGACTGCAG 62.154 72.222 13.48 13.48 45.17 4.41
861 878 4.704103 AGCGGGGGAGACTGCAGA 62.704 66.667 23.35 0.00 45.17 4.26
862 879 3.706373 GCGGGGGAGACTGCAGAA 61.706 66.667 23.35 0.00 42.32 3.02
863 880 2.581354 CGGGGGAGACTGCAGAAG 59.419 66.667 23.35 0.00 0.00 2.85
864 881 2.286523 CGGGGGAGACTGCAGAAGT 61.287 63.158 23.35 3.51 43.85 3.01
865 882 1.298014 GGGGGAGACTGCAGAAGTG 59.702 63.158 23.35 0.00 40.07 3.16
866 883 1.484444 GGGGGAGACTGCAGAAGTGT 61.484 60.000 23.35 0.00 40.07 3.55
867 884 1.267121 GGGGAGACTGCAGAAGTGTA 58.733 55.000 23.35 0.00 40.07 2.90
868 885 1.205893 GGGGAGACTGCAGAAGTGTAG 59.794 57.143 23.35 0.00 40.07 2.74
869 886 2.171840 GGGAGACTGCAGAAGTGTAGA 58.828 52.381 23.35 0.00 40.07 2.59
870 887 2.165437 GGGAGACTGCAGAAGTGTAGAG 59.835 54.545 23.35 0.00 40.07 2.43
871 888 2.823154 GGAGACTGCAGAAGTGTAGAGT 59.177 50.000 23.35 0.00 40.07 3.24
873 890 3.491342 AGACTGCAGAAGTGTAGAGTCA 58.509 45.455 23.35 0.00 40.07 3.41
874 891 3.891977 AGACTGCAGAAGTGTAGAGTCAA 59.108 43.478 23.35 0.00 40.07 3.18
875 892 4.022416 AGACTGCAGAAGTGTAGAGTCAAG 60.022 45.833 23.35 0.00 40.07 3.02
877 894 4.827835 ACTGCAGAAGTGTAGAGTCAAGTA 59.172 41.667 23.35 0.00 38.63 2.24
878 895 5.302059 ACTGCAGAAGTGTAGAGTCAAGTAA 59.698 40.000 23.35 0.00 38.63 2.24
879 896 6.156748 TGCAGAAGTGTAGAGTCAAGTAAA 57.843 37.500 0.00 0.00 0.00 2.01
880 897 5.983720 TGCAGAAGTGTAGAGTCAAGTAAAC 59.016 40.000 0.00 0.00 0.00 2.01
882 899 5.117287 CAGAAGTGTAGAGTCAAGTAAACGC 59.883 44.000 0.00 0.00 0.00 4.84
884 901 4.796369 AGTGTAGAGTCAAGTAAACGCTC 58.204 43.478 0.00 0.00 0.00 5.03
885 902 4.277672 AGTGTAGAGTCAAGTAAACGCTCA 59.722 41.667 0.00 0.00 0.00 4.26
886 903 5.047943 AGTGTAGAGTCAAGTAAACGCTCAT 60.048 40.000 0.00 0.00 0.00 2.90
887 904 6.150641 AGTGTAGAGTCAAGTAAACGCTCATA 59.849 38.462 0.00 0.00 0.00 2.15
888 905 6.250951 GTGTAGAGTCAAGTAAACGCTCATAC 59.749 42.308 0.00 0.00 0.00 2.39
895 912 6.979238 GTCAAGTAAACGCTCATACCTATCTT 59.021 38.462 0.00 0.00 0.00 2.40
903 920 6.508777 ACGCTCATACCTATCTTTTCTCTTC 58.491 40.000 0.00 0.00 0.00 2.87
924 941 1.739049 CTCTCCGATCCAGAGCACC 59.261 63.158 3.89 0.00 31.27 5.01
949 966 5.903764 GCAGTCTGCATTCTAATCTAGTG 57.096 43.478 20.16 0.00 44.26 2.74
976 993 4.329545 GACGGTGGCCTTGCTGGA 62.330 66.667 3.32 0.00 38.35 3.86
1006 1023 3.928779 GCCGGGAGATCATGGCGA 61.929 66.667 2.18 0.00 37.81 5.54
1146 1163 1.003718 ACCCACTGCTTTCCGCTAC 60.004 57.895 0.00 0.00 40.11 3.58
1150 1167 1.067142 CCACTGCTTTCCGCTACACTA 60.067 52.381 0.00 0.00 40.11 2.74
1151 1168 2.263077 CACTGCTTTCCGCTACACTAG 58.737 52.381 0.00 0.00 40.11 2.57
1175 1192 4.888917 AGTACTCTGCTCTGTTTTCTTCC 58.111 43.478 0.00 0.00 0.00 3.46
1177 1194 1.462670 CTCTGCTCTGTTTTCTTCCGC 59.537 52.381 0.00 0.00 0.00 5.54
1178 1195 1.070758 TCTGCTCTGTTTTCTTCCGCT 59.929 47.619 0.00 0.00 0.00 5.52
1179 1196 2.299013 TCTGCTCTGTTTTCTTCCGCTA 59.701 45.455 0.00 0.00 0.00 4.26
1181 1198 2.224185 TGCTCTGTTTTCTTCCGCTACA 60.224 45.455 0.00 0.00 0.00 2.74
1197 1329 4.328983 CCGCTACACTACGAATGACAAATT 59.671 41.667 0.00 0.00 0.00 1.82
1249 1407 7.886338 ACTGAAAAATCACCCAAGAAATAGTC 58.114 34.615 0.00 0.00 0.00 2.59
1272 1430 4.381932 CCATGGGACCAGAAAAATACTTGC 60.382 45.833 2.85 0.00 0.00 4.01
1274 1432 3.572255 TGGGACCAGAAAAATACTTGCAC 59.428 43.478 0.00 0.00 0.00 4.57
1279 1437 5.842907 ACCAGAAAAATACTTGCACCTTTC 58.157 37.500 0.00 0.00 0.00 2.62
1281 1439 6.098266 ACCAGAAAAATACTTGCACCTTTCTT 59.902 34.615 0.00 0.00 32.29 2.52
1295 1453 5.012893 CACCTTTCTTTAGATCTTGCCCTT 58.987 41.667 0.00 0.00 0.00 3.95
1296 1454 5.124617 CACCTTTCTTTAGATCTTGCCCTTC 59.875 44.000 0.00 0.00 0.00 3.46
1305 1463 0.762418 TCTTGCCCTTCGTTTCCTGA 59.238 50.000 0.00 0.00 0.00 3.86
1328 1486 7.319646 TGATGGAAATATGGCAAACTTGTTAC 58.680 34.615 0.00 0.00 0.00 2.50
1334 1492 1.407258 TGGCAAACTTGTTACCTGTGC 59.593 47.619 0.00 3.72 0.00 4.57
1336 1494 2.543653 GGCAAACTTGTTACCTGTGCAG 60.544 50.000 8.66 0.00 32.18 4.41
1347 1505 0.594602 CCTGTGCAGGTCATGTGTTG 59.405 55.000 9.96 0.00 43.61 3.33
1348 1506 1.311859 CTGTGCAGGTCATGTGTTGT 58.688 50.000 0.00 0.00 0.00 3.32
1349 1507 1.002142 CTGTGCAGGTCATGTGTTGTG 60.002 52.381 0.00 0.00 0.00 3.33
1361 1519 5.002516 TCATGTGTTGTGATCTGTTGCATA 58.997 37.500 0.00 0.00 0.00 3.14
1367 1525 6.744537 GTGTTGTGATCTGTTGCATATTTCTC 59.255 38.462 0.00 0.00 0.00 2.87
1374 1532 6.244552 TCTGTTGCATATTTCTCTCCTGAT 57.755 37.500 0.00 0.00 0.00 2.90
1390 1548 7.721399 TCTCTCCTGATTAAAATAGGAAATGGC 59.279 37.037 7.03 0.00 39.93 4.40
1391 1549 6.486657 TCTCCTGATTAAAATAGGAAATGGCG 59.513 38.462 7.03 0.00 39.93 5.69
1406 1564 5.005682 GGAAATGGCGAAATTATTGTTCTGC 59.994 40.000 0.00 0.00 0.00 4.26
1417 1575 6.956299 ATTATTGTTCTGCTTGTGATTTGC 57.044 33.333 0.00 0.00 0.00 3.68
1468 1626 6.462909 CCAGCCAAGAAATATTTTATGGGACC 60.463 42.308 23.75 13.65 31.04 4.46
1514 1672 1.068588 GTCCTTTGTTGGGGTTCTTGC 59.931 52.381 0.00 0.00 0.00 4.01
1516 1674 1.413118 CTTTGTTGGGGTTCTTGCCT 58.587 50.000 0.00 0.00 0.00 4.75
1518 1676 1.408969 TTGTTGGGGTTCTTGCCTTC 58.591 50.000 0.00 0.00 0.00 3.46
1519 1677 0.555769 TGTTGGGGTTCTTGCCTTCT 59.444 50.000 0.00 0.00 0.00 2.85
1520 1678 1.063266 TGTTGGGGTTCTTGCCTTCTT 60.063 47.619 0.00 0.00 0.00 2.52
1521 1679 1.341209 GTTGGGGTTCTTGCCTTCTTG 59.659 52.381 0.00 0.00 0.00 3.02
1527 1685 2.554462 GGTTCTTGCCTTCTTGGTTCTC 59.446 50.000 0.00 0.00 38.35 2.87
1546 1704 3.008375 TCTCATGTGTGCTTTAGGCTCTT 59.992 43.478 0.00 0.00 42.39 2.85
1610 1794 1.227645 TGCTCTGCTCTGTTGCGTT 60.228 52.632 0.00 0.00 35.36 4.84
1621 1805 1.917303 CTGTTGCGTTTGTTCCAACAC 59.083 47.619 1.70 0.00 42.56 3.32
1629 1813 4.724303 CGTTTGTTCCAACACACTACAAA 58.276 39.130 7.05 0.00 37.43 2.83
1631 1815 5.802956 CGTTTGTTCCAACACACTACAAAAT 59.197 36.000 7.05 0.00 39.53 1.82
1633 1817 4.677584 TGTTCCAACACACTACAAAATGC 58.322 39.130 0.00 0.00 33.17 3.56
1851 4789 1.077805 TGGGAAGTCAGAGCCGGTA 59.922 57.895 1.90 0.00 0.00 4.02
2081 5019 4.727475 CTTTGCTAAGGCTAAACAAGAGC 58.273 43.478 0.00 0.00 39.59 4.09
2133 5071 7.228906 CAGAGATGGTCTTTGCAAGATGATATT 59.771 37.037 0.00 0.00 40.18 1.28
2143 5081 5.185454 TGCAAGATGATATTTCTCGTTGGT 58.815 37.500 0.00 0.00 0.00 3.67
2324 5262 2.030805 ACGCTGAGGAAATGCTTGAAAC 60.031 45.455 0.00 0.00 0.00 2.78
2494 5432 6.584185 AACAACAAAGGTAGCCGAATAATT 57.416 33.333 0.00 0.00 0.00 1.40
2496 5434 5.708230 ACAACAAAGGTAGCCGAATAATTGA 59.292 36.000 0.00 0.00 0.00 2.57
2525 5463 3.267233 ATGTGGGCTTGGCTGGGA 61.267 61.111 0.00 0.00 0.00 4.37
2573 5511 3.119495 CCACCTTAAGCACCTGCAAATAC 60.119 47.826 0.00 0.00 45.16 1.89
2665 5604 8.991243 AAATGATGATAGTGGTCAACAAAATG 57.009 30.769 0.00 0.00 35.06 2.32
2819 5760 6.839134 TGAAGCAATGAGGAGGATAGTTACTA 59.161 38.462 0.00 0.00 0.00 1.82
2831 5772 7.449086 GGAGGATAGTTACTATGAGCTACAACT 59.551 40.741 9.87 0.00 0.00 3.16
2833 5774 7.231722 AGGATAGTTACTATGAGCTACAACTGG 59.768 40.741 9.87 0.00 0.00 4.00
2851 5792 1.071542 TGGTTGCCGTCTCATCTCAAA 59.928 47.619 0.00 0.00 0.00 2.69
2920 5861 1.137872 AGCAGCCGTTTGATAGAGAGG 59.862 52.381 0.00 0.00 0.00 3.69
2927 5868 4.021016 GCCGTTTGATAGAGAGGTGGATAT 60.021 45.833 0.00 0.00 0.00 1.63
3004 5945 7.865706 AAGTTATTTCACCGAGCTAATCAAT 57.134 32.000 0.00 0.00 0.00 2.57
3145 6086 2.459934 GCGGCAAATAATGTAACTGGC 58.540 47.619 0.00 0.00 0.00 4.85
3154 6095 7.255590 GCAAATAATGTAACTGGCACTATGGAT 60.256 37.037 0.00 0.00 0.00 3.41
3174 6115 2.803956 TGAGACCTTCCGACATGTAGT 58.196 47.619 0.00 0.00 0.00 2.73
3513 6454 4.034510 GGAACTGCCAATCGAGATTTGTAG 59.965 45.833 11.44 11.44 34.14 2.74
3631 6575 2.981560 GCCCATGCTGTTCACACCG 61.982 63.158 0.00 0.00 33.53 4.94
3636 6580 0.179032 ATGCTGTTCACACCGTTGGA 60.179 50.000 0.00 0.00 0.00 3.53
3731 6675 0.178992 TGTGAGGGTGCCAAAAGGAG 60.179 55.000 0.00 0.00 0.00 3.69
3748 6692 2.039084 AGGAGTCGGCAAACTGAAAGAT 59.961 45.455 0.00 0.00 37.43 2.40
3811 6755 3.489908 GCAAGGCAATTAAAGAGCTAGGC 60.490 47.826 0.00 0.00 0.00 3.93
3842 6786 1.202580 AGCTGAGAAAACTGAGCGTGT 60.203 47.619 0.00 0.00 36.52 4.49
3858 6802 0.958822 GTGTTAACACAAGGGGCCAG 59.041 55.000 29.46 0.00 45.75 4.85
3928 6872 1.125093 TCCGCTCCCTTTCAGTGGAA 61.125 55.000 0.00 0.00 45.67 3.53
4027 7003 6.991938 TGCATTTGGTCAAGCTTTACTTAAT 58.008 32.000 10.47 7.62 36.04 1.40
4028 7004 7.441017 TGCATTTGGTCAAGCTTTACTTAATT 58.559 30.769 10.47 1.75 36.04 1.40
4110 7086 1.347707 TGCACCTTCGTCTTGGAATCT 59.652 47.619 0.00 0.00 0.00 2.40
4111 7087 2.224523 TGCACCTTCGTCTTGGAATCTT 60.225 45.455 0.00 0.00 0.00 2.40
4120 7096 7.865385 CCTTCGTCTTGGAATCTTCTCTTATAG 59.135 40.741 0.00 0.00 0.00 1.31
4126 7102 4.907875 TGGAATCTTCTCTTATAGTGGGGG 59.092 45.833 0.00 0.00 0.00 5.40
4180 7156 6.015940 CCAAGTCTCAAGAAGCTTGGTATTTT 60.016 38.462 2.10 0.00 45.04 1.82
4181 7157 6.809630 AGTCTCAAGAAGCTTGGTATTTTC 57.190 37.500 2.10 0.00 0.00 2.29
4326 7302 3.737559 AGGATATTGCACTTGGTTCCA 57.262 42.857 0.00 0.00 0.00 3.53
4379 7355 2.426023 GAAGTGGACGCACACCCT 59.574 61.111 6.47 0.00 42.28 4.34
4403 7379 4.363990 CCCGTGCTGCGACTGTCT 62.364 66.667 6.21 0.00 44.77 3.41
4410 7401 0.319900 GCTGCGACTGTCTGAGGAAA 60.320 55.000 6.21 0.00 0.00 3.13
4413 7404 0.318762 GCGACTGTCTGAGGAAAGGT 59.681 55.000 6.21 0.00 31.23 3.50
4415 7406 1.337260 CGACTGTCTGAGGAAAGGTGG 60.337 57.143 6.21 0.00 31.23 4.61
4416 7407 1.971357 GACTGTCTGAGGAAAGGTGGA 59.029 52.381 0.00 0.00 31.23 4.02
4417 7408 1.694696 ACTGTCTGAGGAAAGGTGGAC 59.305 52.381 0.00 0.00 31.23 4.02
4593 7603 5.928839 TCTCTTCGTTCAACTAGTAGTACGT 59.071 40.000 18.73 0.00 0.00 3.57
4594 7604 7.090808 TCTCTTCGTTCAACTAGTAGTACGTA 58.909 38.462 18.73 11.61 0.00 3.57
4595 7605 7.050281 TCTTCGTTCAACTAGTAGTACGTAC 57.950 40.000 18.10 18.10 0.00 3.67
4596 7606 6.868864 TCTTCGTTCAACTAGTAGTACGTACT 59.131 38.462 29.62 29.62 44.69 2.73
4597 7607 8.027189 TCTTCGTTCAACTAGTAGTACGTACTA 58.973 37.037 27.51 27.51 42.40 1.82
4634 7651 4.363999 AGTGCGATGTGCTAATTAGTCTC 58.636 43.478 13.91 7.85 46.63 3.36
4676 10218 4.697352 GTGTGTTACAGCCAAGATGATCTT 59.303 41.667 0.97 0.97 37.14 2.40
4707 10249 2.138320 ACAACTCGTGCTGACTGAATG 58.862 47.619 0.00 0.00 0.00 2.67
4708 10250 2.224042 ACAACTCGTGCTGACTGAATGA 60.224 45.455 0.00 0.00 0.00 2.57
4710 10252 0.997932 CTCGTGCTGACTGAATGAGC 59.002 55.000 0.00 0.00 31.09 4.26
4711 10253 0.318120 TCGTGCTGACTGAATGAGCA 59.682 50.000 0.00 0.00 40.40 4.26
4712 10254 1.150827 CGTGCTGACTGAATGAGCAA 58.849 50.000 0.00 0.00 44.08 3.91
4713 10255 1.128136 CGTGCTGACTGAATGAGCAAG 59.872 52.381 0.00 0.00 44.08 4.01
4714 10256 1.467734 GTGCTGACTGAATGAGCAAGG 59.532 52.381 0.00 0.00 44.08 3.61
4715 10257 0.450983 GCTGACTGAATGAGCAAGGC 59.549 55.000 0.00 0.00 32.70 4.35
4716 10258 1.949547 GCTGACTGAATGAGCAAGGCT 60.950 52.381 0.00 0.00 43.88 4.58
4717 10259 2.679059 GCTGACTGAATGAGCAAGGCTA 60.679 50.000 0.00 0.00 39.88 3.93
4718 10260 2.935201 CTGACTGAATGAGCAAGGCTAC 59.065 50.000 0.00 0.00 39.88 3.58
4725 10282 0.835971 TGAGCAAGGCTACTCCACCA 60.836 55.000 13.22 0.00 39.88 4.17
4734 10291 2.236395 GGCTACTCCACCATGTAACACT 59.764 50.000 0.00 0.00 34.01 3.55
4805 10377 5.356882 TTGGTTCTTTTCAGTTATGCTCG 57.643 39.130 0.00 0.00 0.00 5.03
4806 10378 4.385825 TGGTTCTTTTCAGTTATGCTCGT 58.614 39.130 0.00 0.00 0.00 4.18
4820 10392 2.932498 TGCTCGTGCATTTTTAAGCTG 58.068 42.857 8.30 0.00 45.31 4.24
4821 10393 1.650645 GCTCGTGCATTTTTAAGCTGC 59.349 47.619 4.26 0.00 39.41 5.25
4823 10395 0.363178 CGTGCATTTTTAAGCTGCGC 59.637 50.000 0.00 0.00 41.69 6.09
4827 10399 1.267186 GCATTTTTAAGCTGCGCATGC 60.267 47.619 12.24 17.16 43.20 4.06
4828 10400 2.264813 CATTTTTAAGCTGCGCATGCT 58.735 42.857 23.02 23.02 43.34 3.79
4853 10426 5.673337 TTTATAACGCAAGCATGATCTCC 57.327 39.130 0.00 0.00 45.62 3.71
4861 10434 2.522836 AGCATGATCTCCGTCACATC 57.477 50.000 0.00 0.00 0.00 3.06
4870 10443 3.014623 TCTCCGTCACATCGTATTCAGT 58.985 45.455 0.00 0.00 0.00 3.41
4896 10469 6.082984 TGTGAACACATATATTTTGCACGTG 58.917 36.000 12.28 12.28 36.21 4.49
4927 10500 8.349983 TGTTTGTAGCAAAGACTTCCTTAATTC 58.650 33.333 0.00 0.00 34.00 2.17
4928 10501 8.568794 GTTTGTAGCAAAGACTTCCTTAATTCT 58.431 33.333 0.00 0.00 34.00 2.40
4929 10502 8.691661 TTGTAGCAAAGACTTCCTTAATTCTT 57.308 30.769 0.00 0.00 36.48 2.52
4930 10503 8.099364 TGTAGCAAAGACTTCCTTAATTCTTG 57.901 34.615 0.00 0.00 35.47 3.02
4931 10504 7.936847 TGTAGCAAAGACTTCCTTAATTCTTGA 59.063 33.333 0.00 0.00 35.47 3.02
4932 10505 7.823745 AGCAAAGACTTCCTTAATTCTTGAA 57.176 32.000 0.00 0.00 35.47 2.69
4933 10506 7.880105 AGCAAAGACTTCCTTAATTCTTGAAG 58.120 34.615 8.44 8.44 35.47 3.02
4934 10507 6.584184 GCAAAGACTTCCTTAATTCTTGAAGC 59.416 38.462 9.47 4.85 35.47 3.86
4935 10508 7.522889 GCAAAGACTTCCTTAATTCTTGAAGCT 60.523 37.037 9.47 0.00 35.47 3.74
4936 10509 9.003658 CAAAGACTTCCTTAATTCTTGAAGCTA 57.996 33.333 9.47 0.00 35.47 3.32
4937 10510 9.574516 AAAGACTTCCTTAATTCTTGAAGCTAA 57.425 29.630 9.47 0.00 35.47 3.09
4938 10511 8.554835 AGACTTCCTTAATTCTTGAAGCTAAC 57.445 34.615 9.47 0.00 38.17 2.34
4939 10512 7.608376 AGACTTCCTTAATTCTTGAAGCTAACC 59.392 37.037 9.47 0.00 38.17 2.85
4940 10513 7.231467 ACTTCCTTAATTCTTGAAGCTAACCA 58.769 34.615 9.47 0.00 38.17 3.67
4941 10514 7.724061 ACTTCCTTAATTCTTGAAGCTAACCAA 59.276 33.333 9.47 0.00 38.17 3.67
4942 10515 7.448748 TCCTTAATTCTTGAAGCTAACCAAC 57.551 36.000 0.00 0.00 0.00 3.77
4943 10516 6.148811 TCCTTAATTCTTGAAGCTAACCAACG 59.851 38.462 0.00 0.00 0.00 4.10
4944 10517 6.072673 CCTTAATTCTTGAAGCTAACCAACGT 60.073 38.462 0.00 0.00 0.00 3.99
4945 10518 4.749245 ATTCTTGAAGCTAACCAACGTG 57.251 40.909 0.00 0.00 0.00 4.49
4946 10519 1.871039 TCTTGAAGCTAACCAACGTGC 59.129 47.619 0.00 0.00 0.00 5.34
4947 10520 1.601903 CTTGAAGCTAACCAACGTGCA 59.398 47.619 0.00 0.00 0.00 4.57
4948 10521 1.225855 TGAAGCTAACCAACGTGCAG 58.774 50.000 0.00 0.00 0.00 4.41
4949 10522 1.202592 TGAAGCTAACCAACGTGCAGA 60.203 47.619 0.00 0.00 0.00 4.26
4950 10523 1.871039 GAAGCTAACCAACGTGCAGAA 59.129 47.619 0.00 0.00 0.00 3.02
4951 10524 1.512926 AGCTAACCAACGTGCAGAAG 58.487 50.000 0.00 0.00 0.00 2.85
4952 10525 1.202651 AGCTAACCAACGTGCAGAAGT 60.203 47.619 0.00 0.00 0.00 3.01
4953 10526 2.036733 AGCTAACCAACGTGCAGAAGTA 59.963 45.455 0.00 0.00 0.00 2.24
4954 10527 3.000727 GCTAACCAACGTGCAGAAGTAT 58.999 45.455 0.00 0.00 0.00 2.12
4955 10528 3.435671 GCTAACCAACGTGCAGAAGTATT 59.564 43.478 0.00 0.00 0.00 1.89
4956 10529 3.896648 AACCAACGTGCAGAAGTATTG 57.103 42.857 0.00 0.00 0.00 1.90
4957 10530 2.151202 ACCAACGTGCAGAAGTATTGG 58.849 47.619 0.00 0.00 41.92 3.16
4958 10531 1.468520 CCAACGTGCAGAAGTATTGGG 59.531 52.381 0.00 0.00 34.25 4.12
4959 10532 1.135689 CAACGTGCAGAAGTATTGGGC 60.136 52.381 0.00 0.00 0.00 5.36
4960 10533 0.676782 ACGTGCAGAAGTATTGGGCC 60.677 55.000 0.00 0.00 0.00 5.80
4961 10534 0.392998 CGTGCAGAAGTATTGGGCCT 60.393 55.000 4.53 0.00 0.00 5.19
4962 10535 1.383523 GTGCAGAAGTATTGGGCCTC 58.616 55.000 4.53 0.00 0.00 4.70
4963 10536 1.065126 GTGCAGAAGTATTGGGCCTCT 60.065 52.381 4.53 0.00 0.00 3.69
4964 10537 1.635487 TGCAGAAGTATTGGGCCTCTT 59.365 47.619 4.53 4.34 0.00 2.85
4965 10538 2.293170 GCAGAAGTATTGGGCCTCTTC 58.707 52.381 4.53 13.07 37.24 2.87
4966 10539 2.555199 CAGAAGTATTGGGCCTCTTCG 58.445 52.381 4.53 6.87 40.49 3.79
4967 10540 2.093447 CAGAAGTATTGGGCCTCTTCGT 60.093 50.000 4.53 2.33 40.49 3.85
4968 10541 2.168728 AGAAGTATTGGGCCTCTTCGTC 59.831 50.000 4.53 1.39 40.49 4.20
4969 10542 1.568504 AGTATTGGGCCTCTTCGTCA 58.431 50.000 4.53 0.00 0.00 4.35
4970 10543 2.119495 AGTATTGGGCCTCTTCGTCAT 58.881 47.619 4.53 0.00 0.00 3.06
4971 10544 2.103263 AGTATTGGGCCTCTTCGTCATC 59.897 50.000 4.53 0.00 0.00 2.92
4972 10545 0.179073 ATTGGGCCTCTTCGTCATCG 60.179 55.000 4.53 0.00 38.55 3.84
4973 10546 1.541310 TTGGGCCTCTTCGTCATCGT 61.541 55.000 4.53 0.00 38.33 3.73
4974 10547 1.227002 GGGCCTCTTCGTCATCGTC 60.227 63.158 0.84 0.00 38.33 4.20
4975 10548 1.668101 GGGCCTCTTCGTCATCGTCT 61.668 60.000 0.84 0.00 38.33 4.18
4976 10549 0.248702 GGCCTCTTCGTCATCGTCTC 60.249 60.000 0.00 0.00 38.33 3.36
4977 10550 0.736053 GCCTCTTCGTCATCGTCTCT 59.264 55.000 0.00 0.00 38.33 3.10
4978 10551 1.532921 GCCTCTTCGTCATCGTCTCTG 60.533 57.143 0.00 0.00 38.33 3.35
4979 10552 1.532921 CCTCTTCGTCATCGTCTCTGC 60.533 57.143 0.00 0.00 38.33 4.26
4980 10553 1.131315 CTCTTCGTCATCGTCTCTGCA 59.869 52.381 0.00 0.00 38.33 4.41
4981 10554 1.135660 TCTTCGTCATCGTCTCTGCAC 60.136 52.381 0.00 0.00 38.33 4.57
4982 10555 0.881796 TTCGTCATCGTCTCTGCACT 59.118 50.000 0.00 0.00 38.33 4.40
4983 10556 0.448197 TCGTCATCGTCTCTGCACTC 59.552 55.000 0.00 0.00 38.33 3.51
4984 10557 0.169009 CGTCATCGTCTCTGCACTCA 59.831 55.000 0.00 0.00 0.00 3.41
4985 10558 1.793353 CGTCATCGTCTCTGCACTCAG 60.793 57.143 0.00 0.00 41.67 3.35
4986 10559 0.813821 TCATCGTCTCTGCACTCAGG 59.186 55.000 0.00 0.00 40.69 3.86
4987 10560 0.179116 CATCGTCTCTGCACTCAGGG 60.179 60.000 0.00 0.00 42.26 4.45
4988 10561 1.954362 ATCGTCTCTGCACTCAGGGC 61.954 60.000 0.00 0.00 40.66 5.19
4989 10562 2.644212 CGTCTCTGCACTCAGGGCT 61.644 63.158 0.00 0.00 40.66 5.19
4990 10563 1.676384 GTCTCTGCACTCAGGGCTT 59.324 57.895 0.00 0.00 40.66 4.35
4991 10564 0.898320 GTCTCTGCACTCAGGGCTTA 59.102 55.000 0.00 0.00 40.66 3.09
4992 10565 1.484240 GTCTCTGCACTCAGGGCTTAT 59.516 52.381 0.00 0.00 40.66 1.73
4993 10566 2.695666 GTCTCTGCACTCAGGGCTTATA 59.304 50.000 0.00 0.00 40.66 0.98
4994 10567 3.133003 GTCTCTGCACTCAGGGCTTATAA 59.867 47.826 0.00 0.00 40.66 0.98
4995 10568 3.774766 TCTCTGCACTCAGGGCTTATAAA 59.225 43.478 0.00 0.00 40.66 1.40
4996 10569 3.873910 TCTGCACTCAGGGCTTATAAAC 58.126 45.455 0.00 0.00 40.69 2.01
4997 10570 3.263170 TCTGCACTCAGGGCTTATAAACA 59.737 43.478 0.00 0.00 40.69 2.83
4998 10571 3.609853 TGCACTCAGGGCTTATAAACAG 58.390 45.455 0.00 0.00 0.00 3.16
4999 10572 2.356069 GCACTCAGGGCTTATAAACAGC 59.644 50.000 0.00 0.00 36.45 4.40
5000 10573 3.878778 CACTCAGGGCTTATAAACAGCT 58.121 45.455 0.00 0.00 37.43 4.24
5001 10574 3.624861 CACTCAGGGCTTATAAACAGCTG 59.375 47.826 13.48 13.48 37.43 4.24
5002 10575 2.615912 CTCAGGGCTTATAAACAGCTGC 59.384 50.000 15.27 0.00 37.43 5.25
5003 10576 1.331756 CAGGGCTTATAAACAGCTGCG 59.668 52.381 15.27 0.00 37.43 5.18
5004 10577 1.209504 AGGGCTTATAAACAGCTGCGA 59.790 47.619 15.27 0.00 37.43 5.10
5005 10578 1.599542 GGGCTTATAAACAGCTGCGAG 59.400 52.381 15.27 4.04 37.43 5.03
5006 10579 2.280628 GGCTTATAAACAGCTGCGAGT 58.719 47.619 15.27 0.12 37.43 4.18
5007 10580 2.030946 GGCTTATAAACAGCTGCGAGTG 59.969 50.000 15.27 0.00 37.43 3.51
5008 10581 2.537730 GCTTATAAACAGCTGCGAGTGC 60.538 50.000 15.27 6.30 43.20 4.40
5009 10582 1.651987 TATAAACAGCTGCGAGTGCC 58.348 50.000 15.27 0.00 41.78 5.01
5010 10583 0.036010 ATAAACAGCTGCGAGTGCCT 60.036 50.000 15.27 0.00 41.78 4.75
5011 10584 0.670546 TAAACAGCTGCGAGTGCCTC 60.671 55.000 15.27 0.00 41.78 4.70
5012 10585 2.388890 AAACAGCTGCGAGTGCCTCT 62.389 55.000 15.27 0.00 41.78 3.69
5013 10586 2.508887 CAGCTGCGAGTGCCTCTC 60.509 66.667 0.00 0.00 41.78 3.20
5031 10604 4.021925 GCTTGGCGAGGTGGGACT 62.022 66.667 3.44 0.00 0.00 3.85
5032 10605 2.656069 GCTTGGCGAGGTGGGACTA 61.656 63.158 3.44 0.00 0.00 2.59
5033 10606 1.980052 CTTGGCGAGGTGGGACTAA 59.020 57.895 0.00 0.00 0.00 2.24
5034 10607 0.323629 CTTGGCGAGGTGGGACTAAA 59.676 55.000 0.00 0.00 0.00 1.85
5035 10608 0.766131 TTGGCGAGGTGGGACTAAAA 59.234 50.000 0.00 0.00 0.00 1.52
5036 10609 0.766131 TGGCGAGGTGGGACTAAAAA 59.234 50.000 0.00 0.00 0.00 1.94
5055 10628 3.930634 AAAACAGCTGCAGGAAGAATC 57.069 42.857 17.12 0.00 0.00 2.52
5056 10629 2.574006 AACAGCTGCAGGAAGAATCA 57.426 45.000 17.12 0.00 0.00 2.57
5057 10630 2.574006 ACAGCTGCAGGAAGAATCAA 57.426 45.000 17.12 0.00 0.00 2.57
5058 10631 2.867624 ACAGCTGCAGGAAGAATCAAA 58.132 42.857 17.12 0.00 0.00 2.69
5059 10632 3.225104 ACAGCTGCAGGAAGAATCAAAA 58.775 40.909 17.12 0.00 0.00 2.44
5060 10633 3.830755 ACAGCTGCAGGAAGAATCAAAAT 59.169 39.130 17.12 0.00 0.00 1.82
5061 10634 5.012239 ACAGCTGCAGGAAGAATCAAAATA 58.988 37.500 17.12 0.00 0.00 1.40
5062 10635 5.477984 ACAGCTGCAGGAAGAATCAAAATAA 59.522 36.000 17.12 0.00 0.00 1.40
5063 10636 6.015180 ACAGCTGCAGGAAGAATCAAAATAAA 60.015 34.615 17.12 0.00 0.00 1.40
5064 10637 6.869913 CAGCTGCAGGAAGAATCAAAATAAAA 59.130 34.615 17.12 0.00 0.00 1.52
5065 10638 7.548075 CAGCTGCAGGAAGAATCAAAATAAAAT 59.452 33.333 17.12 0.00 0.00 1.82
5066 10639 8.752187 AGCTGCAGGAAGAATCAAAATAAAATA 58.248 29.630 17.12 0.00 0.00 1.40
5067 10640 9.369904 GCTGCAGGAAGAATCAAAATAAAATAA 57.630 29.630 17.12 0.00 0.00 1.40
5101 10674 4.979657 GCCACCTAAAGGGCTACC 57.020 61.111 0.20 0.00 46.74 3.18
5102 10675 1.996086 GCCACCTAAAGGGCTACCA 59.004 57.895 0.20 0.00 46.74 3.25
5103 10676 0.393944 GCCACCTAAAGGGCTACCAC 60.394 60.000 0.20 0.00 46.74 4.16
5104 10677 0.988832 CCACCTAAAGGGCTACCACA 59.011 55.000 0.20 0.00 40.13 4.17
5105 10678 1.065418 CCACCTAAAGGGCTACCACAG 60.065 57.143 0.20 0.00 40.13 3.66
5115 10688 1.571919 GCTACCACAGCCTGAATACG 58.428 55.000 0.00 0.00 45.23 3.06
5116 10689 1.136305 GCTACCACAGCCTGAATACGA 59.864 52.381 0.00 0.00 45.23 3.43
5117 10690 2.810650 CTACCACAGCCTGAATACGAC 58.189 52.381 0.00 0.00 0.00 4.34
5118 10691 1.267121 ACCACAGCCTGAATACGACT 58.733 50.000 0.00 0.00 0.00 4.18
5119 10692 2.453521 ACCACAGCCTGAATACGACTA 58.546 47.619 0.00 0.00 0.00 2.59
5120 10693 2.427453 ACCACAGCCTGAATACGACTAG 59.573 50.000 0.00 0.00 0.00 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
99 100 1.615124 TTCTTCCCGAGATGGCCCA 60.615 57.895 0.00 0.00 35.87 5.36
100 101 1.147153 CTTCTTCCCGAGATGGCCC 59.853 63.158 0.00 0.00 35.87 5.80
429 433 1.674057 CTTGAGGCCTCTCCAACGT 59.326 57.895 32.28 0.00 39.23 3.99
633 649 0.249784 CTCGTCCTCCCTCGTCGATA 60.250 60.000 0.00 0.00 0.00 2.92
693 710 2.624838 AGTGCAGCTGCTATGTTTTGTT 59.375 40.909 36.61 9.21 42.66 2.83
697 714 3.005554 CACTAGTGCAGCTGCTATGTTT 58.994 45.455 36.61 18.41 42.66 2.83
698 715 2.625737 CACTAGTGCAGCTGCTATGTT 58.374 47.619 36.61 20.00 42.66 2.71
699 716 2.306341 CACTAGTGCAGCTGCTATGT 57.694 50.000 36.61 25.51 42.66 2.29
712 729 3.622826 AACGGTGGGCGCACTAGT 61.623 61.111 29.99 25.70 0.00 2.57
727 744 3.050275 GACTGGACGGGCAGCAAC 61.050 66.667 0.00 0.00 0.00 4.17
728 745 4.329545 GGACTGGACGGGCAGCAA 62.330 66.667 0.00 0.00 0.00 3.91
730 747 4.101448 ATGGACTGGACGGGCAGC 62.101 66.667 0.00 0.00 0.00 5.25
731 748 2.124983 CATGGACTGGACGGGCAG 60.125 66.667 0.00 0.00 0.00 4.85
732 749 4.408821 GCATGGACTGGACGGGCA 62.409 66.667 0.00 0.00 0.00 5.36
734 751 2.436646 GTGCATGGACTGGACGGG 60.437 66.667 10.51 0.00 36.41 5.28
737 754 1.589716 GGCTTGTGCATGGACTGGAC 61.590 60.000 18.75 9.33 45.74 4.02
742 759 1.907807 TTGGGGCTTGTGCATGGAC 60.908 57.895 10.90 10.90 41.91 4.02
745 762 2.259204 CGTTGGGGCTTGTGCATG 59.741 61.111 0.00 0.00 41.91 4.06
746 763 2.990967 CCGTTGGGGCTTGTGCAT 60.991 61.111 0.00 0.00 41.91 3.96
756 773 2.352323 GCAAAATAGTTGTCCCGTTGGG 60.352 50.000 0.00 0.00 46.11 4.12
758 775 3.564511 CTGCAAAATAGTTGTCCCGTTG 58.435 45.455 0.00 0.00 0.00 4.10
759 776 2.030274 GCTGCAAAATAGTTGTCCCGTT 60.030 45.455 0.00 0.00 0.00 4.44
760 777 1.539827 GCTGCAAAATAGTTGTCCCGT 59.460 47.619 0.00 0.00 0.00 5.28
761 778 1.539388 TGCTGCAAAATAGTTGTCCCG 59.461 47.619 0.00 0.00 0.00 5.14
763 780 3.568538 CACTGCTGCAAAATAGTTGTCC 58.431 45.455 3.02 0.00 0.00 4.02
764 781 3.568538 CCACTGCTGCAAAATAGTTGTC 58.431 45.455 3.02 0.00 0.00 3.18
765 782 2.288395 GCCACTGCTGCAAAATAGTTGT 60.288 45.455 3.02 0.00 33.53 3.32
766 783 2.331194 GCCACTGCTGCAAAATAGTTG 58.669 47.619 3.02 0.00 33.53 3.16
767 784 2.730550 GCCACTGCTGCAAAATAGTT 57.269 45.000 3.02 0.00 33.53 2.24
779 796 3.741344 CCGACAATATAAGTAGCCACTGC 59.259 47.826 0.00 0.00 34.36 4.40
784 801 4.252971 TGAGCCGACAATATAAGTAGCC 57.747 45.455 0.00 0.00 0.00 3.93
785 802 5.348997 GGATTGAGCCGACAATATAAGTAGC 59.651 44.000 0.00 0.00 40.03 3.58
786 803 6.455647 TGGATTGAGCCGACAATATAAGTAG 58.544 40.000 0.00 0.00 40.03 2.57
787 804 6.413783 TGGATTGAGCCGACAATATAAGTA 57.586 37.500 0.00 0.00 40.03 2.24
789 806 6.348786 CCATTGGATTGAGCCGACAATATAAG 60.349 42.308 0.00 0.00 40.03 1.73
790 807 5.473162 CCATTGGATTGAGCCGACAATATAA 59.527 40.000 0.00 0.00 40.03 0.98
792 809 3.822735 CCATTGGATTGAGCCGACAATAT 59.177 43.478 0.00 0.00 40.03 1.28
794 811 2.026641 CCATTGGATTGAGCCGACAAT 58.973 47.619 0.00 0.00 42.19 2.71
796 813 1.031571 GCCATTGGATTGAGCCGACA 61.032 55.000 6.95 0.00 0.00 4.35
797 814 1.031571 TGCCATTGGATTGAGCCGAC 61.032 55.000 6.95 0.00 0.00 4.79
799 816 0.748450 ATTGCCATTGGATTGAGCCG 59.252 50.000 6.95 0.00 0.00 5.52
800 817 1.808891 GCATTGCCATTGGATTGAGCC 60.809 52.381 6.95 0.00 0.00 4.70
802 819 2.167693 ACTGCATTGCCATTGGATTGAG 59.832 45.455 6.95 0.00 0.00 3.02
804 821 2.276201 CACTGCATTGCCATTGGATTG 58.724 47.619 6.95 1.31 0.00 2.67
808 825 1.807981 CGCACTGCATTGCCATTGG 60.808 57.895 21.76 5.09 39.53 3.16
811 828 0.101759 GAATCGCACTGCATTGCCAT 59.898 50.000 21.76 13.04 39.53 4.40
813 830 0.109179 TTGAATCGCACTGCATTGCC 60.109 50.000 21.76 9.39 39.53 4.52
814 831 1.917273 ATTGAATCGCACTGCATTGC 58.083 45.000 18.39 18.39 39.28 3.56
815 832 5.051307 CCAATAATTGAATCGCACTGCATTG 60.051 40.000 0.00 0.00 0.00 2.82
816 833 5.045215 CCAATAATTGAATCGCACTGCATT 58.955 37.500 1.11 0.51 0.00 3.56
817 834 4.338964 TCCAATAATTGAATCGCACTGCAT 59.661 37.500 1.11 0.00 0.00 3.96
820 837 7.425577 TCTATCCAATAATTGAATCGCACTG 57.574 36.000 0.00 0.00 0.00 3.66
821 838 6.148480 GCTCTATCCAATAATTGAATCGCACT 59.852 38.462 0.00 0.00 0.00 4.40
823 840 5.120674 CGCTCTATCCAATAATTGAATCGCA 59.879 40.000 0.00 0.00 0.00 5.10
824 841 5.446473 CCGCTCTATCCAATAATTGAATCGC 60.446 44.000 0.00 0.00 0.00 4.58
825 842 5.063944 CCCGCTCTATCCAATAATTGAATCG 59.936 44.000 0.00 0.00 0.00 3.34
827 844 5.256474 CCCCGCTCTATCCAATAATTGAAT 58.744 41.667 0.00 0.00 0.00 2.57
828 845 4.506625 CCCCCGCTCTATCCAATAATTGAA 60.507 45.833 0.00 0.00 0.00 2.69
831 848 3.256704 TCCCCCGCTCTATCCAATAATT 58.743 45.455 0.00 0.00 0.00 1.40
832 849 2.840651 CTCCCCCGCTCTATCCAATAAT 59.159 50.000 0.00 0.00 0.00 1.28
833 850 2.158219 TCTCCCCCGCTCTATCCAATAA 60.158 50.000 0.00 0.00 0.00 1.40
834 851 1.431633 TCTCCCCCGCTCTATCCAATA 59.568 52.381 0.00 0.00 0.00 1.90
835 852 0.191064 TCTCCCCCGCTCTATCCAAT 59.809 55.000 0.00 0.00 0.00 3.16
836 853 0.759436 GTCTCCCCCGCTCTATCCAA 60.759 60.000 0.00 0.00 0.00 3.53
838 855 1.154221 AGTCTCCCCCGCTCTATCC 59.846 63.158 0.00 0.00 0.00 2.59
839 856 1.811645 GCAGTCTCCCCCGCTCTATC 61.812 65.000 0.00 0.00 0.00 2.08
841 858 2.442272 GCAGTCTCCCCCGCTCTA 60.442 66.667 0.00 0.00 0.00 2.43
842 859 4.704103 TGCAGTCTCCCCCGCTCT 62.704 66.667 0.00 0.00 0.00 4.09
843 860 4.154347 CTGCAGTCTCCCCCGCTC 62.154 72.222 5.25 0.00 0.00 5.03
844 861 4.704103 TCTGCAGTCTCCCCCGCT 62.704 66.667 14.67 0.00 0.00 5.52
847 864 1.298014 CACTTCTGCAGTCTCCCCC 59.702 63.158 14.67 0.00 30.92 5.40
849 866 2.165437 CTCTACACTTCTGCAGTCTCCC 59.835 54.545 14.67 0.00 30.92 4.30
850 867 2.823154 ACTCTACACTTCTGCAGTCTCC 59.177 50.000 14.67 0.00 30.92 3.71
852 869 3.491342 TGACTCTACACTTCTGCAGTCT 58.509 45.455 14.67 0.00 30.92 3.24
853 870 3.924918 TGACTCTACACTTCTGCAGTC 57.075 47.619 14.67 0.80 30.92 3.51
855 872 4.250116 ACTTGACTCTACACTTCTGCAG 57.750 45.455 7.63 7.63 0.00 4.41
856 873 5.784578 TTACTTGACTCTACACTTCTGCA 57.215 39.130 0.00 0.00 0.00 4.41
859 876 5.009811 AGCGTTTACTTGACTCTACACTTCT 59.990 40.000 0.00 0.00 0.00 2.85
860 877 5.221130 AGCGTTTACTTGACTCTACACTTC 58.779 41.667 0.00 0.00 0.00 3.01
861 878 5.197682 AGCGTTTACTTGACTCTACACTT 57.802 39.130 0.00 0.00 0.00 3.16
862 879 4.277672 TGAGCGTTTACTTGACTCTACACT 59.722 41.667 0.00 0.00 0.00 3.55
863 880 4.543692 TGAGCGTTTACTTGACTCTACAC 58.456 43.478 0.00 0.00 0.00 2.90
864 881 4.841443 TGAGCGTTTACTTGACTCTACA 57.159 40.909 0.00 0.00 0.00 2.74
865 882 5.742926 GGTATGAGCGTTTACTTGACTCTAC 59.257 44.000 0.00 0.00 0.00 2.59
866 883 5.651139 AGGTATGAGCGTTTACTTGACTCTA 59.349 40.000 0.00 0.00 0.00 2.43
867 884 4.463186 AGGTATGAGCGTTTACTTGACTCT 59.537 41.667 0.00 0.00 0.00 3.24
868 885 4.745649 AGGTATGAGCGTTTACTTGACTC 58.254 43.478 0.00 0.00 0.00 3.36
869 886 4.803098 AGGTATGAGCGTTTACTTGACT 57.197 40.909 0.00 0.00 0.00 3.41
870 887 6.505272 AGATAGGTATGAGCGTTTACTTGAC 58.495 40.000 0.00 0.00 0.00 3.18
871 888 6.710597 AGATAGGTATGAGCGTTTACTTGA 57.289 37.500 0.00 0.00 0.00 3.02
873 890 8.258708 AGAAAAGATAGGTATGAGCGTTTACTT 58.741 33.333 0.00 0.00 0.00 2.24
874 891 7.783042 AGAAAAGATAGGTATGAGCGTTTACT 58.217 34.615 0.00 0.00 0.00 2.24
875 892 7.921745 AGAGAAAAGATAGGTATGAGCGTTTAC 59.078 37.037 0.00 0.00 0.00 2.01
877 894 6.879400 AGAGAAAAGATAGGTATGAGCGTTT 58.121 36.000 0.00 0.00 0.00 3.60
878 895 6.472686 AGAGAAAAGATAGGTATGAGCGTT 57.527 37.500 0.00 0.00 0.00 4.84
879 896 6.461788 GGAAGAGAAAAGATAGGTATGAGCGT 60.462 42.308 0.00 0.00 0.00 5.07
880 897 5.923684 GGAAGAGAAAAGATAGGTATGAGCG 59.076 44.000 0.00 0.00 0.00 5.03
882 899 6.556874 AGGGGAAGAGAAAAGATAGGTATGAG 59.443 42.308 0.00 0.00 0.00 2.90
884 901 6.556874 AGAGGGGAAGAGAAAAGATAGGTATG 59.443 42.308 0.00 0.00 0.00 2.39
885 902 6.698670 AGAGGGGAAGAGAAAAGATAGGTAT 58.301 40.000 0.00 0.00 0.00 2.73
886 903 6.106407 AGAGGGGAAGAGAAAAGATAGGTA 57.894 41.667 0.00 0.00 0.00 3.08
887 904 4.966168 GAGAGGGGAAGAGAAAAGATAGGT 59.034 45.833 0.00 0.00 0.00 3.08
888 905 4.346709 GGAGAGGGGAAGAGAAAAGATAGG 59.653 50.000 0.00 0.00 0.00 2.57
895 912 2.389715 GATCGGAGAGGGGAAGAGAAA 58.610 52.381 0.00 0.00 43.63 2.52
903 920 2.206536 GCTCTGGATCGGAGAGGGG 61.207 68.421 17.66 0.17 43.63 4.79
929 946 4.406972 TGGCACTAGATTAGAATGCAGACT 59.593 41.667 0.00 0.00 38.05 3.24
930 947 4.697514 TGGCACTAGATTAGAATGCAGAC 58.302 43.478 0.00 0.00 38.05 3.51
934 951 5.580297 GCTATCTGGCACTAGATTAGAATGC 59.420 44.000 1.61 0.00 38.35 3.56
935 952 5.804473 CGCTATCTGGCACTAGATTAGAATG 59.196 44.000 1.61 0.00 38.35 2.67
936 953 5.712446 TCGCTATCTGGCACTAGATTAGAAT 59.288 40.000 1.61 0.00 38.35 2.40
939 956 4.670478 CGTCGCTATCTGGCACTAGATTAG 60.670 50.000 1.61 0.47 38.35 1.73
949 966 2.279517 CCACCGTCGCTATCTGGC 60.280 66.667 0.00 0.00 0.00 4.85
992 1009 1.596477 GTGCTCGCCATGATCTCCC 60.596 63.158 0.00 0.00 0.00 4.30
1006 1023 2.359107 CATGCTCACCACCGTGCT 60.359 61.111 0.00 0.00 40.04 4.40
1071 1088 2.932130 GAAGGCTCATCTCGGTGGCC 62.932 65.000 0.00 0.00 42.74 5.36
1146 1163 6.503589 AAACAGAGCAGAGTACTACTAGTG 57.496 41.667 5.39 0.00 0.00 2.74
1150 1167 6.294843 GGAAGAAAACAGAGCAGAGTACTACT 60.295 42.308 0.00 0.00 0.00 2.57
1151 1168 5.865013 GGAAGAAAACAGAGCAGAGTACTAC 59.135 44.000 0.00 0.00 0.00 2.73
1175 1192 5.450376 AATTTGTCATTCGTAGTGTAGCG 57.550 39.130 0.00 0.00 0.00 4.26
1177 1194 7.905126 TGCATAATTTGTCATTCGTAGTGTAG 58.095 34.615 0.00 0.00 0.00 2.74
1178 1195 7.835634 TGCATAATTTGTCATTCGTAGTGTA 57.164 32.000 0.00 0.00 0.00 2.90
1179 1196 6.735678 TGCATAATTTGTCATTCGTAGTGT 57.264 33.333 0.00 0.00 0.00 3.55
1181 1198 6.542005 TGGATGCATAATTTGTCATTCGTAGT 59.458 34.615 0.00 0.00 0.00 2.73
1197 1329 2.732844 TGTTGCCTGATGGATGCATA 57.267 45.000 0.00 0.00 34.51 3.14
1225 1382 7.039784 TGGACTATTTCTTGGGTGATTTTTCAG 60.040 37.037 0.00 0.00 0.00 3.02
1249 1407 4.381932 GCAAGTATTTTTCTGGTCCCATGG 60.382 45.833 4.14 4.14 0.00 3.66
1272 1430 4.593956 AGGGCAAGATCTAAAGAAAGGTG 58.406 43.478 0.00 0.00 0.00 4.00
1274 1432 4.333926 CGAAGGGCAAGATCTAAAGAAAGG 59.666 45.833 0.00 0.00 0.00 3.11
1279 1437 4.095036 GGAAACGAAGGGCAAGATCTAAAG 59.905 45.833 0.00 0.00 0.00 1.85
1281 1439 3.263425 AGGAAACGAAGGGCAAGATCTAA 59.737 43.478 0.00 0.00 0.00 2.10
1305 1463 6.440328 AGGTAACAAGTTTGCCATATTTCCAT 59.560 34.615 8.30 0.00 41.41 3.41
1334 1492 3.405831 ACAGATCACAACACATGACCTG 58.594 45.455 0.00 0.00 0.00 4.00
1336 1494 3.610114 GCAACAGATCACAACACATGACC 60.610 47.826 0.00 0.00 0.00 4.02
1344 1502 7.081526 AGAGAAATATGCAACAGATCACAAC 57.918 36.000 0.00 0.00 0.00 3.32
1347 1505 6.018098 CAGGAGAGAAATATGCAACAGATCAC 60.018 42.308 0.00 0.00 0.00 3.06
1348 1506 6.053650 CAGGAGAGAAATATGCAACAGATCA 58.946 40.000 0.00 0.00 0.00 2.92
1349 1507 6.286758 TCAGGAGAGAAATATGCAACAGATC 58.713 40.000 0.00 0.00 0.00 2.75
1367 1525 6.486657 TCGCCATTTCCTATTTTAATCAGGAG 59.513 38.462 0.00 0.00 39.58 3.69
1390 1548 7.801547 AATCACAAGCAGAACAATAATTTCG 57.198 32.000 0.00 0.00 0.00 3.46
1391 1549 7.953710 GCAAATCACAAGCAGAACAATAATTTC 59.046 33.333 0.00 0.00 0.00 2.17
1401 1559 1.536766 CCTCGCAAATCACAAGCAGAA 59.463 47.619 0.00 0.00 0.00 3.02
1468 1626 8.097904 CGCACAAAGATTCGATTTATTTTTCTG 58.902 33.333 0.00 0.00 0.00 3.02
1477 1635 3.074412 AGGACGCACAAAGATTCGATTT 58.926 40.909 0.00 0.00 0.00 2.17
1514 1672 2.227388 GCACACATGAGAACCAAGAAGG 59.773 50.000 0.00 0.00 45.67 3.46
1516 1674 3.213206 AGCACACATGAGAACCAAGAA 57.787 42.857 0.00 0.00 0.00 2.52
1518 1676 3.996150 AAAGCACACATGAGAACCAAG 57.004 42.857 0.00 0.00 0.00 3.61
1519 1677 3.820467 CCTAAAGCACACATGAGAACCAA 59.180 43.478 0.00 0.00 0.00 3.67
1520 1678 3.411446 CCTAAAGCACACATGAGAACCA 58.589 45.455 0.00 0.00 0.00 3.67
1521 1679 2.162408 GCCTAAAGCACACATGAGAACC 59.838 50.000 0.00 0.00 42.97 3.62
1546 1704 1.704628 TGTGAAGGAAGGGCAAGATCA 59.295 47.619 0.00 0.00 0.00 2.92
1621 1805 5.375417 TGTCATTCTGGCATTTTGTAGTG 57.625 39.130 0.00 0.00 0.00 2.74
1629 1813 4.147321 ACTCTTGTTGTCATTCTGGCATT 58.853 39.130 0.00 0.00 29.04 3.56
1631 1815 3.213206 ACTCTTGTTGTCATTCTGGCA 57.787 42.857 0.00 0.00 0.00 4.92
1851 4789 4.110493 GCTTAAGCAGCCGTCGAT 57.890 55.556 22.59 0.00 43.65 3.59
2081 5019 4.146745 TGACATCCACCATCTCAATCAG 57.853 45.455 0.00 0.00 0.00 2.90
2133 5071 1.219664 CCGCCCATACCAACGAGAA 59.780 57.895 0.00 0.00 0.00 2.87
2143 5081 0.913205 TCTTGCCTAAACCGCCCATA 59.087 50.000 0.00 0.00 0.00 2.74
2303 5241 1.896220 TTCAAGCATTTCCTCAGCGT 58.104 45.000 0.00 0.00 0.00 5.07
2324 5262 2.350522 CACCGACTTCCCTTCAAGATG 58.649 52.381 0.00 0.00 0.00 2.90
2494 5432 2.217750 CCCACATCTCGTGTTGTTTCA 58.782 47.619 0.00 0.00 44.78 2.69
2496 5434 0.951558 GCCCACATCTCGTGTTGTTT 59.048 50.000 0.00 0.00 44.78 2.83
2573 5511 2.754946 AGCAAATTTGTGGCATCCTG 57.245 45.000 19.03 0.00 0.00 3.86
2665 5604 3.487120 AGACCACCACACTTCTTTACC 57.513 47.619 0.00 0.00 0.00 2.85
2730 5670 6.002653 AGATATTTTCCCACTCTGTTACCC 57.997 41.667 0.00 0.00 0.00 3.69
2819 5760 1.826385 GGCAACCAGTTGTAGCTCAT 58.174 50.000 11.88 0.00 42.31 2.90
2831 5772 0.684535 TTGAGATGAGACGGCAACCA 59.315 50.000 0.00 0.00 0.00 3.67
2833 5774 3.002791 TGATTTGAGATGAGACGGCAAC 58.997 45.455 0.00 0.00 0.00 4.17
2920 5861 3.933861 ACAAACCCCTCAGATATCCAC 57.066 47.619 0.00 0.00 0.00 4.02
2927 5868 1.628846 GGCTCTAACAAACCCCTCAGA 59.371 52.381 0.00 0.00 0.00 3.27
3004 5945 2.027285 TGAGGGTTGAATCATGCTTCGA 60.027 45.455 4.92 0.05 0.00 3.71
3145 6086 2.959030 TCGGAAGGTCTCATCCATAGTG 59.041 50.000 0.00 0.00 35.34 2.74
3154 6095 2.803956 ACTACATGTCGGAAGGTCTCA 58.196 47.619 0.00 0.00 0.00 3.27
3490 6431 2.749621 ACAAATCTCGATTGGCAGTTCC 59.250 45.455 2.57 0.00 0.00 3.62
3513 6454 4.155280 GGAGACTGTGTAGACTCTTGAGTC 59.845 50.000 19.73 19.73 42.74 3.36
3569 6513 1.562672 CCCTCGGGGTCAATCAGGTT 61.563 60.000 0.00 0.00 38.25 3.50
3576 6520 1.923395 AAGCATCCCTCGGGGTCAA 60.923 57.895 0.00 0.00 44.74 3.18
3631 6575 6.049790 GGTACAATCACTAGGATCTTCCAAC 58.950 44.000 0.00 0.00 39.61 3.77
3636 6580 5.446860 TCTCGGTACAATCACTAGGATCTT 58.553 41.667 0.00 0.00 34.28 2.40
3731 6675 2.413371 GCAGATCTTTCAGTTTGCCGAC 60.413 50.000 0.00 0.00 0.00 4.79
3748 6692 4.530553 TCCACAACCTCTAGTATTTGCAGA 59.469 41.667 0.00 0.00 0.00 4.26
3842 6786 0.105964 TTGCTGGCCCCTTGTGTTAA 60.106 50.000 0.00 0.00 0.00 2.01
3858 6802 3.392882 AGTACCTTGCATTTTTGCTTGC 58.607 40.909 0.00 0.00 39.33 4.01
4027 7003 3.945346 TCTTCCTTTATTACGCTGCCAA 58.055 40.909 0.00 0.00 0.00 4.52
4028 7004 3.620427 TCTTCCTTTATTACGCTGCCA 57.380 42.857 0.00 0.00 0.00 4.92
4159 7135 6.809630 AGAAAATACCAAGCTTCTTGAGAC 57.190 37.500 8.04 0.00 0.00 3.36
4180 7156 4.017958 ACTCTCTCAGTTCCACCAGATAGA 60.018 45.833 0.00 0.00 26.56 1.98
4181 7157 4.277476 ACTCTCTCAGTTCCACCAGATAG 58.723 47.826 0.00 0.00 26.56 2.08
4310 7286 3.505386 ACCATTGGAACCAAGTGCAATA 58.495 40.909 10.37 0.00 37.44 1.90
4313 7289 1.327303 GACCATTGGAACCAAGTGCA 58.673 50.000 10.37 0.00 39.47 4.57
4379 7355 2.048597 CGCAGCACGGGACTGTTA 60.049 61.111 10.16 0.00 37.47 2.41
4403 7379 0.696143 TGTGGGTCCACCTTTCCTCA 60.696 55.000 16.57 0.00 45.63 3.86
4410 7401 2.460853 CCAGGTTGTGGGTCCACCT 61.461 63.158 16.57 5.71 45.63 4.00
4422 7413 3.175710 AACGGTGCCTCCCAGGTT 61.176 61.111 0.00 0.00 37.80 3.50
4593 7603 4.278669 GCACTCCATAGCTGCTAACTAGTA 59.721 45.833 14.13 0.00 31.25 1.82
4594 7604 3.068873 GCACTCCATAGCTGCTAACTAGT 59.931 47.826 14.13 13.18 31.25 2.57
4595 7605 3.648009 GCACTCCATAGCTGCTAACTAG 58.352 50.000 14.13 12.58 31.25 2.57
4596 7606 2.034685 CGCACTCCATAGCTGCTAACTA 59.965 50.000 14.13 1.04 31.54 2.24
4597 7607 1.202463 CGCACTCCATAGCTGCTAACT 60.202 52.381 14.13 0.00 31.54 2.24
4598 7608 1.202417 TCGCACTCCATAGCTGCTAAC 60.202 52.381 14.13 0.00 31.54 2.34
4599 7609 1.111277 TCGCACTCCATAGCTGCTAA 58.889 50.000 14.13 0.00 31.54 3.09
4634 7651 6.852664 ACACACAAAAAGGAAAACAGAGTAG 58.147 36.000 0.00 0.00 0.00 2.57
4676 10218 4.743151 CAGCACGAGTTGTAAGTGTAAAGA 59.257 41.667 0.00 0.00 38.10 2.52
4707 10249 0.543749 ATGGTGGAGTAGCCTTGCTC 59.456 55.000 0.00 0.00 40.44 4.26
4708 10250 0.254178 CATGGTGGAGTAGCCTTGCT 59.746 55.000 0.00 0.00 43.41 3.91
4710 10252 3.270877 GTTACATGGTGGAGTAGCCTTG 58.729 50.000 0.00 0.00 37.63 3.61
4711 10253 2.910319 TGTTACATGGTGGAGTAGCCTT 59.090 45.455 0.00 0.00 37.63 4.35
4712 10254 2.236395 GTGTTACATGGTGGAGTAGCCT 59.764 50.000 0.00 0.00 37.63 4.58
4713 10255 2.236395 AGTGTTACATGGTGGAGTAGCC 59.764 50.000 0.00 0.00 37.10 3.93
4714 10256 3.611766 AGTGTTACATGGTGGAGTAGC 57.388 47.619 0.00 0.00 0.00 3.58
4715 10257 5.394224 CCAGTAGTGTTACATGGTGGAGTAG 60.394 48.000 0.00 0.00 31.96 2.57
4716 10258 4.464951 CCAGTAGTGTTACATGGTGGAGTA 59.535 45.833 0.00 0.00 31.96 2.59
4717 10259 3.260884 CCAGTAGTGTTACATGGTGGAGT 59.739 47.826 0.00 0.00 31.96 3.85
4718 10260 3.260884 ACCAGTAGTGTTACATGGTGGAG 59.739 47.826 7.47 0.00 38.62 3.86
4725 10282 6.106673 GCAATCTGTACCAGTAGTGTTACAT 58.893 40.000 8.25 0.00 32.61 2.29
4734 10291 6.156256 AGGAAATAGTGCAATCTGTACCAGTA 59.844 38.462 0.00 0.00 33.24 2.74
4781 10346 6.183360 ACGAGCATAACTGAAAAGAACCAAAA 60.183 34.615 0.00 0.00 0.00 2.44
4784 10349 4.213270 CACGAGCATAACTGAAAAGAACCA 59.787 41.667 0.00 0.00 0.00 3.67
4820 10392 3.550561 TGCGTTATAAATAAGCATGCGC 58.449 40.909 13.01 0.00 42.21 6.09
4821 10393 4.087085 GCTTGCGTTATAAATAAGCATGCG 59.913 41.667 13.01 0.00 44.59 4.73
4827 10399 7.959651 GGAGATCATGCTTGCGTTATAAATAAG 59.040 37.037 0.00 0.00 0.00 1.73
4828 10400 7.360017 CGGAGATCATGCTTGCGTTATAAATAA 60.360 37.037 0.00 0.00 0.00 1.40
4831 10403 4.211164 CGGAGATCATGCTTGCGTTATAAA 59.789 41.667 0.00 0.00 0.00 1.40
4832 10404 3.740832 CGGAGATCATGCTTGCGTTATAA 59.259 43.478 0.00 0.00 0.00 0.98
4853 10426 4.384547 TCACAAACTGAATACGATGTGACG 59.615 41.667 2.54 0.00 41.39 4.35
4870 10443 7.114106 CACGTGCAAAATATATGTGTTCACAAA 59.886 33.333 0.82 0.00 0.00 2.83
4889 10462 2.610532 TACAAACAGGGGCACGTGCA 62.611 55.000 38.60 14.17 44.36 4.57
4896 10469 1.269723 GTCTTTGCTACAAACAGGGGC 59.730 52.381 0.00 0.00 0.00 5.80
4927 10500 1.601903 TGCACGTTGGTTAGCTTCAAG 59.398 47.619 0.00 0.00 0.00 3.02
4928 10501 1.601903 CTGCACGTTGGTTAGCTTCAA 59.398 47.619 0.00 0.00 0.00 2.69
4929 10502 1.202592 TCTGCACGTTGGTTAGCTTCA 60.203 47.619 0.00 0.00 0.00 3.02
4930 10503 1.508632 TCTGCACGTTGGTTAGCTTC 58.491 50.000 0.00 0.00 0.00 3.86
4931 10504 1.873591 CTTCTGCACGTTGGTTAGCTT 59.126 47.619 0.00 0.00 0.00 3.74
4932 10505 1.202651 ACTTCTGCACGTTGGTTAGCT 60.203 47.619 0.00 0.00 0.00 3.32
4933 10506 1.226746 ACTTCTGCACGTTGGTTAGC 58.773 50.000 0.00 0.00 0.00 3.09
4934 10507 4.142902 CCAATACTTCTGCACGTTGGTTAG 60.143 45.833 0.00 0.00 33.25 2.34
4935 10508 3.749088 CCAATACTTCTGCACGTTGGTTA 59.251 43.478 0.00 0.00 33.25 2.85
4936 10509 2.552315 CCAATACTTCTGCACGTTGGTT 59.448 45.455 0.00 0.00 33.25 3.67
4937 10510 2.151202 CCAATACTTCTGCACGTTGGT 58.849 47.619 0.00 0.00 33.25 3.67
4938 10511 1.468520 CCCAATACTTCTGCACGTTGG 59.531 52.381 0.00 0.00 36.68 3.77
4939 10512 1.135689 GCCCAATACTTCTGCACGTTG 60.136 52.381 0.00 0.00 0.00 4.10
4940 10513 1.165270 GCCCAATACTTCTGCACGTT 58.835 50.000 0.00 0.00 0.00 3.99
4941 10514 0.676782 GGCCCAATACTTCTGCACGT 60.677 55.000 0.00 0.00 0.00 4.49
4942 10515 0.392998 AGGCCCAATACTTCTGCACG 60.393 55.000 0.00 0.00 0.00 5.34
4943 10516 1.065126 AGAGGCCCAATACTTCTGCAC 60.065 52.381 0.00 0.00 0.00 4.57
4944 10517 1.289160 AGAGGCCCAATACTTCTGCA 58.711 50.000 0.00 0.00 0.00 4.41
4945 10518 2.293170 GAAGAGGCCCAATACTTCTGC 58.707 52.381 0.00 0.00 36.72 4.26
4946 10519 2.093447 ACGAAGAGGCCCAATACTTCTG 60.093 50.000 0.00 6.78 37.27 3.02
4947 10520 2.168728 GACGAAGAGGCCCAATACTTCT 59.831 50.000 0.00 0.00 37.27 2.85
4948 10521 2.093658 TGACGAAGAGGCCCAATACTTC 60.094 50.000 0.00 6.64 36.44 3.01
4949 10522 1.906574 TGACGAAGAGGCCCAATACTT 59.093 47.619 0.00 0.00 0.00 2.24
4950 10523 1.568504 TGACGAAGAGGCCCAATACT 58.431 50.000 0.00 0.00 0.00 2.12
4951 10524 2.484889 GATGACGAAGAGGCCCAATAC 58.515 52.381 0.00 0.00 0.00 1.89
4952 10525 1.068588 CGATGACGAAGAGGCCCAATA 59.931 52.381 0.00 0.00 42.66 1.90
4953 10526 0.179073 CGATGACGAAGAGGCCCAAT 60.179 55.000 0.00 0.00 42.66 3.16
4954 10527 1.218047 CGATGACGAAGAGGCCCAA 59.782 57.895 0.00 0.00 42.66 4.12
4955 10528 1.945354 GACGATGACGAAGAGGCCCA 61.945 60.000 0.00 0.00 42.66 5.36
4956 10529 1.227002 GACGATGACGAAGAGGCCC 60.227 63.158 0.00 0.00 42.66 5.80
4957 10530 0.248702 GAGACGATGACGAAGAGGCC 60.249 60.000 0.00 0.00 42.66 5.19
4958 10531 0.736053 AGAGACGATGACGAAGAGGC 59.264 55.000 0.00 0.00 42.66 4.70
4959 10532 1.532921 GCAGAGACGATGACGAAGAGG 60.533 57.143 0.00 0.00 42.66 3.69
4960 10533 1.131315 TGCAGAGACGATGACGAAGAG 59.869 52.381 0.00 0.00 42.66 2.85
4961 10534 1.135660 GTGCAGAGACGATGACGAAGA 60.136 52.381 0.00 0.00 42.66 2.87
4962 10535 1.135546 AGTGCAGAGACGATGACGAAG 60.136 52.381 0.00 0.00 42.66 3.79
4963 10536 0.881796 AGTGCAGAGACGATGACGAA 59.118 50.000 0.00 0.00 42.66 3.85
4964 10537 0.448197 GAGTGCAGAGACGATGACGA 59.552 55.000 0.00 0.00 42.66 4.20
4965 10538 0.169009 TGAGTGCAGAGACGATGACG 59.831 55.000 0.00 0.00 45.75 4.35
4966 10539 1.468908 CCTGAGTGCAGAGACGATGAC 60.469 57.143 0.00 0.00 45.17 3.06
4967 10540 0.813821 CCTGAGTGCAGAGACGATGA 59.186 55.000 0.00 0.00 45.17 2.92
4968 10541 0.179116 CCCTGAGTGCAGAGACGATG 60.179 60.000 0.00 0.00 45.17 3.84
4969 10542 1.954362 GCCCTGAGTGCAGAGACGAT 61.954 60.000 0.00 0.00 45.17 3.73
4970 10543 2.640302 GCCCTGAGTGCAGAGACGA 61.640 63.158 0.00 0.00 45.17 4.20
4971 10544 2.125753 GCCCTGAGTGCAGAGACG 60.126 66.667 0.00 0.00 45.17 4.18
4972 10545 0.898320 TAAGCCCTGAGTGCAGAGAC 59.102 55.000 0.00 0.00 45.17 3.36
4973 10546 1.871418 ATAAGCCCTGAGTGCAGAGA 58.129 50.000 0.00 0.00 45.17 3.10
4974 10547 3.827008 TTATAAGCCCTGAGTGCAGAG 57.173 47.619 0.00 0.00 45.17 3.35
4975 10548 3.263170 TGTTTATAAGCCCTGAGTGCAGA 59.737 43.478 0.00 0.00 45.17 4.26
4976 10549 3.609853 TGTTTATAAGCCCTGAGTGCAG 58.390 45.455 0.00 0.00 41.93 4.41
4977 10550 3.609853 CTGTTTATAAGCCCTGAGTGCA 58.390 45.455 0.00 0.00 0.00 4.57
4978 10551 2.356069 GCTGTTTATAAGCCCTGAGTGC 59.644 50.000 0.00 0.00 34.45 4.40
4979 10552 3.624861 CAGCTGTTTATAAGCCCTGAGTG 59.375 47.826 5.25 0.00 41.82 3.51
4980 10553 3.878778 CAGCTGTTTATAAGCCCTGAGT 58.121 45.455 5.25 0.00 41.82 3.41
4981 10554 2.615912 GCAGCTGTTTATAAGCCCTGAG 59.384 50.000 16.64 2.07 41.82 3.35
4982 10555 2.643551 GCAGCTGTTTATAAGCCCTGA 58.356 47.619 16.64 0.00 41.82 3.86
4983 10556 1.331756 CGCAGCTGTTTATAAGCCCTG 59.668 52.381 16.64 10.66 41.82 4.45
4984 10557 1.209504 TCGCAGCTGTTTATAAGCCCT 59.790 47.619 16.64 0.00 41.82 5.19
4985 10558 1.599542 CTCGCAGCTGTTTATAAGCCC 59.400 52.381 16.64 0.00 41.82 5.19
4986 10559 2.030946 CACTCGCAGCTGTTTATAAGCC 59.969 50.000 16.64 0.00 41.82 4.35
4987 10560 2.537730 GCACTCGCAGCTGTTTATAAGC 60.538 50.000 16.64 7.68 41.15 3.09
4988 10561 2.030946 GGCACTCGCAGCTGTTTATAAG 59.969 50.000 16.64 6.59 41.24 1.73
4989 10562 2.006888 GGCACTCGCAGCTGTTTATAA 58.993 47.619 16.64 0.00 41.24 0.98
4990 10563 1.207089 AGGCACTCGCAGCTGTTTATA 59.793 47.619 16.64 0.00 41.24 0.98
4991 10564 0.036010 AGGCACTCGCAGCTGTTTAT 60.036 50.000 16.64 0.00 41.24 1.40
4992 10565 1.371183 AGGCACTCGCAGCTGTTTA 59.629 52.632 16.64 0.00 41.24 2.01
4993 10566 2.111878 AGGCACTCGCAGCTGTTT 59.888 55.556 16.64 0.00 41.24 2.83
5014 10587 2.180159 TTAGTCCCACCTCGCCAAGC 62.180 60.000 0.00 0.00 0.00 4.01
5015 10588 0.323629 TTTAGTCCCACCTCGCCAAG 59.676 55.000 0.00 0.00 0.00 3.61
5016 10589 0.766131 TTTTAGTCCCACCTCGCCAA 59.234 50.000 0.00 0.00 0.00 4.52
5017 10590 0.766131 TTTTTAGTCCCACCTCGCCA 59.234 50.000 0.00 0.00 0.00 5.69
5018 10591 3.637184 TTTTTAGTCCCACCTCGCC 57.363 52.632 0.00 0.00 0.00 5.54
5034 10607 3.638160 TGATTCTTCCTGCAGCTGTTTTT 59.362 39.130 16.64 0.00 0.00 1.94
5035 10608 3.225104 TGATTCTTCCTGCAGCTGTTTT 58.775 40.909 16.64 0.00 0.00 2.43
5036 10609 2.867624 TGATTCTTCCTGCAGCTGTTT 58.132 42.857 16.64 0.00 0.00 2.83
5037 10610 2.574006 TGATTCTTCCTGCAGCTGTT 57.426 45.000 16.64 0.00 0.00 3.16
5038 10611 2.574006 TTGATTCTTCCTGCAGCTGT 57.426 45.000 16.64 0.00 0.00 4.40
5039 10612 3.928727 TTTTGATTCTTCCTGCAGCTG 57.071 42.857 10.11 10.11 0.00 4.24
5040 10613 6.594788 TTTATTTTGATTCTTCCTGCAGCT 57.405 33.333 8.66 0.00 0.00 4.24
5041 10614 7.838771 ATTTTATTTTGATTCTTCCTGCAGC 57.161 32.000 8.66 0.00 0.00 5.25
5085 10658 0.988832 TGTGGTAGCCCTTTAGGTGG 59.011 55.000 0.00 0.00 38.26 4.61
5086 10659 2.403252 CTGTGGTAGCCCTTTAGGTG 57.597 55.000 0.00 0.00 38.26 4.00
5097 10670 2.427453 AGTCGTATTCAGGCTGTGGTAG 59.573 50.000 15.27 5.15 0.00 3.18
5098 10671 2.453521 AGTCGTATTCAGGCTGTGGTA 58.546 47.619 15.27 3.44 0.00 3.25
5099 10672 1.267121 AGTCGTATTCAGGCTGTGGT 58.733 50.000 15.27 4.43 0.00 4.16
5100 10673 3.085443 CTAGTCGTATTCAGGCTGTGG 57.915 52.381 15.27 0.84 0.00 4.17


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.