Multiple sequence alignment - TraesCS4A01G445700

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G445700 chr4A 100.000 3661 0 0 1 3661 713607067 713603407 0.000000e+00 6761.0
1 TraesCS4A01G445700 chr4A 97.633 1014 23 1 2648 3661 621726794 621725782 0.000000e+00 1738.0
2 TraesCS4A01G445700 chr4A 81.195 569 54 27 388 933 713612856 713612318 3.400000e-110 409.0
3 TraesCS4A01G445700 chr7D 93.026 1606 81 13 937 2537 19399517 19401096 0.000000e+00 2316.0
4 TraesCS4A01G445700 chr7D 93.114 944 58 6 2722 3661 168813591 168814531 0.000000e+00 1376.0
5 TraesCS4A01G445700 chr7D 87.778 360 22 12 522 866 19398183 19398535 5.690000e-108 401.0
6 TraesCS4A01G445700 chr2A 97.137 1013 26 3 2649 3661 677215013 677216022 0.000000e+00 1707.0
7 TraesCS4A01G445700 chr2A 93.320 1018 61 7 2648 3661 70118659 70119673 0.000000e+00 1496.0
8 TraesCS4A01G445700 chr2A 91.544 1017 57 11 2648 3661 12897874 12898864 0.000000e+00 1375.0
9 TraesCS4A01G445700 chr2A 85.938 64 7 2 185 247 49067918 49067856 2.360000e-07 67.6
10 TraesCS4A01G445700 chr5A 97.137 1013 11 2 2649 3661 649449964 649448970 0.000000e+00 1694.0
11 TraesCS4A01G445700 chr5A 85.453 1478 181 25 1046 2512 617097329 617095875 0.000000e+00 1507.0
12 TraesCS4A01G445700 chr5A 84.997 1473 191 21 1049 2512 617123680 617122229 0.000000e+00 1469.0
13 TraesCS4A01G445700 chr5D 85.637 1476 182 19 1046 2512 493912439 493913893 0.000000e+00 1524.0
14 TraesCS4A01G445700 chr5D 84.600 1474 197 19 1044 2508 494079172 494077720 0.000000e+00 1437.0
15 TraesCS4A01G445700 chr5D 81.141 1490 200 53 1046 2490 542106126 542107579 0.000000e+00 1120.0
16 TraesCS4A01G445700 chr5D 87.770 278 32 2 1 276 543489865 543490142 1.270000e-84 324.0
17 TraesCS4A01G445700 chr5D 81.343 134 23 2 2107 2239 513662468 513662336 1.390000e-19 108.0
18 TraesCS4A01G445700 chr5B 85.637 1476 182 20 1046 2512 610282428 610280974 0.000000e+00 1524.0
19 TraesCS4A01G445700 chr5B 85.230 1476 188 20 1046 2512 610107940 610106486 0.000000e+00 1491.0
20 TraesCS4A01G445700 chr5B 85.092 1469 185 20 1049 2506 610205916 610204471 0.000000e+00 1469.0
21 TraesCS4A01G445700 chr1A 93.701 1016 58 6 2649 3661 327706105 327707117 0.000000e+00 1517.0
22 TraesCS4A01G445700 chr1A 84.573 1465 174 29 1068 2503 456243412 456244853 0.000000e+00 1406.0
23 TraesCS4A01G445700 chr1A 92.739 964 62 6 2649 3610 561391448 561392405 0.000000e+00 1386.0
24 TraesCS4A01G445700 chr1A 92.093 860 59 7 2649 3505 561407112 561407965 0.000000e+00 1203.0
25 TraesCS4A01G445700 chr3D 93.220 1003 63 5 2662 3661 35725013 35724013 0.000000e+00 1471.0
26 TraesCS4A01G445700 chr7A 91.288 528 37 3 2016 2537 19858533 19859057 0.000000e+00 712.0
27 TraesCS4A01G445700 chr7A 88.500 200 20 3 78 275 11762878 11762680 4.720000e-59 239.0
28 TraesCS4A01G445700 chr7A 85.385 130 17 2 731 859 19875925 19876053 2.290000e-27 134.0
29 TraesCS4A01G445700 chr7A 94.643 56 3 0 2588 2643 19859070 19859125 1.810000e-13 87.9
30 TraesCS4A01G445700 chr7B 86.371 587 52 17 3101 3661 84222508 84223092 1.870000e-172 616.0
31 TraesCS4A01G445700 chr7B 83.898 118 19 0 145 262 526422655 526422772 2.990000e-21 113.0
32 TraesCS4A01G445700 chr1B 82.482 274 43 4 3 274 411985373 411985103 6.110000e-58 235.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G445700 chr4A 713603407 713607067 3660 True 6761.00 6761 100.0000 1 3661 1 chr4A.!!$R2 3660
1 TraesCS4A01G445700 chr4A 621725782 621726794 1012 True 1738.00 1738 97.6330 2648 3661 1 chr4A.!!$R1 1013
2 TraesCS4A01G445700 chr4A 713612318 713612856 538 True 409.00 409 81.1950 388 933 1 chr4A.!!$R3 545
3 TraesCS4A01G445700 chr7D 168813591 168814531 940 False 1376.00 1376 93.1140 2722 3661 1 chr7D.!!$F1 939
4 TraesCS4A01G445700 chr7D 19398183 19401096 2913 False 1358.50 2316 90.4020 522 2537 2 chr7D.!!$F2 2015
5 TraesCS4A01G445700 chr2A 677215013 677216022 1009 False 1707.00 1707 97.1370 2649 3661 1 chr2A.!!$F3 1012
6 TraesCS4A01G445700 chr2A 70118659 70119673 1014 False 1496.00 1496 93.3200 2648 3661 1 chr2A.!!$F2 1013
7 TraesCS4A01G445700 chr2A 12897874 12898864 990 False 1375.00 1375 91.5440 2648 3661 1 chr2A.!!$F1 1013
8 TraesCS4A01G445700 chr5A 649448970 649449964 994 True 1694.00 1694 97.1370 2649 3661 1 chr5A.!!$R3 1012
9 TraesCS4A01G445700 chr5A 617095875 617097329 1454 True 1507.00 1507 85.4530 1046 2512 1 chr5A.!!$R1 1466
10 TraesCS4A01G445700 chr5A 617122229 617123680 1451 True 1469.00 1469 84.9970 1049 2512 1 chr5A.!!$R2 1463
11 TraesCS4A01G445700 chr5D 493912439 493913893 1454 False 1524.00 1524 85.6370 1046 2512 1 chr5D.!!$F1 1466
12 TraesCS4A01G445700 chr5D 494077720 494079172 1452 True 1437.00 1437 84.6000 1044 2508 1 chr5D.!!$R1 1464
13 TraesCS4A01G445700 chr5D 542106126 542107579 1453 False 1120.00 1120 81.1410 1046 2490 1 chr5D.!!$F2 1444
14 TraesCS4A01G445700 chr5B 610280974 610282428 1454 True 1524.00 1524 85.6370 1046 2512 1 chr5B.!!$R3 1466
15 TraesCS4A01G445700 chr5B 610106486 610107940 1454 True 1491.00 1491 85.2300 1046 2512 1 chr5B.!!$R1 1466
16 TraesCS4A01G445700 chr5B 610204471 610205916 1445 True 1469.00 1469 85.0920 1049 2506 1 chr5B.!!$R2 1457
17 TraesCS4A01G445700 chr1A 327706105 327707117 1012 False 1517.00 1517 93.7010 2649 3661 1 chr1A.!!$F1 1012
18 TraesCS4A01G445700 chr1A 456243412 456244853 1441 False 1406.00 1406 84.5730 1068 2503 1 chr1A.!!$F2 1435
19 TraesCS4A01G445700 chr1A 561391448 561392405 957 False 1386.00 1386 92.7390 2649 3610 1 chr1A.!!$F3 961
20 TraesCS4A01G445700 chr1A 561407112 561407965 853 False 1203.00 1203 92.0930 2649 3505 1 chr1A.!!$F4 856
21 TraesCS4A01G445700 chr3D 35724013 35725013 1000 True 1471.00 1471 93.2200 2662 3661 1 chr3D.!!$R1 999
22 TraesCS4A01G445700 chr7A 19858533 19859125 592 False 399.95 712 92.9655 2016 2643 2 chr7A.!!$F2 627
23 TraesCS4A01G445700 chr7B 84222508 84223092 584 False 616.00 616 86.3710 3101 3661 1 chr7B.!!$F1 560

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
790 818 0.035152 TGAAGGGTGATTGAGCGCAT 60.035 50.0 11.47 0.0 0.0 4.73 F
959 1929 0.108281 GAGCCCAGACCCTTTACGAC 60.108 60.0 0.00 0.0 0.0 4.34 F
1679 2674 0.321671 CACTGGGCCTTCTTCGAGAA 59.678 55.0 4.53 0.0 32.5 2.87 F
2397 3415 0.645868 GCGACGCCATACAGAAGAAC 59.354 55.0 9.14 0.0 0.0 3.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2467 3485 0.037326 GTCAACTCGTCCATCAGCCA 60.037 55.00 0.00 0.0 0.00 4.75 R
2542 3564 0.107643 TGAAACGAGCCATGTGGTCA 59.892 50.00 12.02 0.0 41.69 4.02 R
2544 3566 0.108585 AGTGAAACGAGCCATGTGGT 59.891 50.00 0.35 0.0 45.86 4.16 R
3338 4386 9.533253 CAAAGTCTTTACCAAATTCAACATTCT 57.467 29.63 0.00 0.0 0.00 2.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.014335 GCTGCAATGATTTCCAACCC 57.986 50.000 0.00 0.00 0.00 4.11
20 21 1.275856 GCTGCAATGATTTCCAACCCA 59.724 47.619 0.00 0.00 0.00 4.51
21 22 2.093341 GCTGCAATGATTTCCAACCCAT 60.093 45.455 0.00 0.00 0.00 4.00
22 23 3.788937 CTGCAATGATTTCCAACCCATC 58.211 45.455 0.00 0.00 0.00 3.51
23 24 2.166050 TGCAATGATTTCCAACCCATCG 59.834 45.455 0.00 0.00 0.00 3.84
24 25 2.481795 GCAATGATTTCCAACCCATCGG 60.482 50.000 0.00 0.00 0.00 4.18
25 26 3.023119 CAATGATTTCCAACCCATCGGA 58.977 45.455 0.00 0.00 0.00 4.55
26 27 2.418368 TGATTTCCAACCCATCGGAG 57.582 50.000 0.00 0.00 31.51 4.63
27 28 1.912731 TGATTTCCAACCCATCGGAGA 59.087 47.619 0.00 0.00 45.75 3.71
28 29 2.307392 TGATTTCCAACCCATCGGAGAA 59.693 45.455 0.00 0.00 43.58 2.87
29 30 2.194201 TTTCCAACCCATCGGAGAAC 57.806 50.000 0.00 0.00 43.58 3.01
30 31 1.060729 TTCCAACCCATCGGAGAACA 58.939 50.000 0.00 0.00 43.58 3.18
31 32 1.285280 TCCAACCCATCGGAGAACAT 58.715 50.000 0.00 0.00 43.58 2.71
32 33 2.473070 TCCAACCCATCGGAGAACATA 58.527 47.619 0.00 0.00 43.58 2.29
33 34 3.045634 TCCAACCCATCGGAGAACATAT 58.954 45.455 0.00 0.00 43.58 1.78
34 35 3.071023 TCCAACCCATCGGAGAACATATC 59.929 47.826 0.00 0.00 43.58 1.63
35 36 3.181455 CCAACCCATCGGAGAACATATCA 60.181 47.826 0.00 0.00 43.58 2.15
36 37 3.753294 ACCCATCGGAGAACATATCAC 57.247 47.619 0.00 0.00 43.58 3.06
37 38 3.038280 ACCCATCGGAGAACATATCACA 58.962 45.455 0.00 0.00 43.58 3.58
38 39 3.454447 ACCCATCGGAGAACATATCACAA 59.546 43.478 0.00 0.00 43.58 3.33
39 40 3.809832 CCCATCGGAGAACATATCACAAC 59.190 47.826 0.00 0.00 43.58 3.32
40 41 4.441792 CCATCGGAGAACATATCACAACA 58.558 43.478 0.00 0.00 43.58 3.33
41 42 5.059161 CCATCGGAGAACATATCACAACAT 58.941 41.667 0.00 0.00 43.58 2.71
42 43 5.049886 CCATCGGAGAACATATCACAACATG 60.050 44.000 0.00 0.00 43.58 3.21
43 44 3.871006 TCGGAGAACATATCACAACATGC 59.129 43.478 0.00 0.00 0.00 4.06
44 45 3.002656 CGGAGAACATATCACAACATGCC 59.997 47.826 0.00 0.00 0.00 4.40
45 46 3.002656 GGAGAACATATCACAACATGCCG 59.997 47.826 0.00 0.00 0.00 5.69
46 47 2.355756 AGAACATATCACAACATGCCGC 59.644 45.455 0.00 0.00 0.00 6.53
47 48 1.024271 ACATATCACAACATGCCGCC 58.976 50.000 0.00 0.00 0.00 6.13
48 49 1.023502 CATATCACAACATGCCGCCA 58.976 50.000 0.00 0.00 0.00 5.69
49 50 1.610038 CATATCACAACATGCCGCCAT 59.390 47.619 0.00 0.00 0.00 4.40
50 51 1.308047 TATCACAACATGCCGCCATC 58.692 50.000 0.00 0.00 0.00 3.51
51 52 1.717791 ATCACAACATGCCGCCATCG 61.718 55.000 0.00 0.00 0.00 3.84
52 53 2.359850 ACAACATGCCGCCATCGT 60.360 55.556 0.00 0.00 0.00 3.73
53 54 2.398554 ACAACATGCCGCCATCGTC 61.399 57.895 0.00 0.00 0.00 4.20
54 55 2.824041 AACATGCCGCCATCGTCC 60.824 61.111 0.00 0.00 0.00 4.79
55 56 3.620419 AACATGCCGCCATCGTCCA 62.620 57.895 0.00 0.00 0.00 4.02
56 57 3.274586 CATGCCGCCATCGTCCAG 61.275 66.667 0.00 0.00 0.00 3.86
57 58 4.552365 ATGCCGCCATCGTCCAGG 62.552 66.667 0.00 0.00 0.00 4.45
59 60 4.899239 GCCGCCATCGTCCAGGAG 62.899 72.222 0.00 0.00 0.00 3.69
60 61 3.147595 CCGCCATCGTCCAGGAGA 61.148 66.667 0.00 0.00 0.00 3.71
61 62 2.502492 CCGCCATCGTCCAGGAGAT 61.502 63.158 0.00 0.00 0.00 2.75
62 63 1.006805 CGCCATCGTCCAGGAGATC 60.007 63.158 0.00 0.00 0.00 2.75
63 64 1.006805 GCCATCGTCCAGGAGATCG 60.007 63.158 0.00 0.00 0.00 3.69
64 65 1.006805 CCATCGTCCAGGAGATCGC 60.007 63.158 0.00 0.00 0.00 4.58
65 66 1.006805 CATCGTCCAGGAGATCGCC 60.007 63.158 7.52 7.52 0.00 5.54
66 67 2.556459 ATCGTCCAGGAGATCGCCG 61.556 63.158 10.07 5.20 0.00 6.46
67 68 4.933064 CGTCCAGGAGATCGCCGC 62.933 72.222 10.07 1.59 0.00 6.53
68 69 4.593864 GTCCAGGAGATCGCCGCC 62.594 72.222 10.07 0.00 34.63 6.13
70 71 3.933722 CCAGGAGATCGCCGCCAT 61.934 66.667 10.07 0.00 37.17 4.40
71 72 2.664185 CAGGAGATCGCCGCCATG 60.664 66.667 10.07 0.00 37.17 3.66
72 73 2.839632 AGGAGATCGCCGCCATGA 60.840 61.111 10.07 0.00 37.17 3.07
73 74 2.212811 AGGAGATCGCCGCCATGAT 61.213 57.895 10.07 0.00 37.17 2.45
74 75 2.031516 GGAGATCGCCGCCATGATG 61.032 63.158 0.00 0.00 34.56 3.07
75 76 1.005748 GAGATCGCCGCCATGATGA 60.006 57.895 0.00 0.00 0.00 2.92
76 77 1.005275 AGATCGCCGCCATGATGAG 60.005 57.895 0.00 0.00 0.00 2.90
77 78 1.005748 GATCGCCGCCATGATGAGA 60.006 57.895 0.00 0.00 0.00 3.27
78 79 1.005275 ATCGCCGCCATGATGAGAG 60.005 57.895 0.00 0.00 0.00 3.20
79 80 2.446142 ATCGCCGCCATGATGAGAGG 62.446 60.000 0.00 0.00 0.00 3.69
80 81 2.824546 GCCGCCATGATGAGAGGA 59.175 61.111 7.61 0.00 0.00 3.71
81 82 1.301558 GCCGCCATGATGAGAGGAG 60.302 63.158 7.61 0.00 0.00 3.69
82 83 1.370437 CCGCCATGATGAGAGGAGG 59.630 63.158 0.00 0.00 36.05 4.30
83 84 1.406065 CCGCCATGATGAGAGGAGGT 61.406 60.000 0.00 0.00 37.57 3.85
84 85 1.332195 CGCCATGATGAGAGGAGGTA 58.668 55.000 0.00 0.00 0.00 3.08
85 86 1.271934 CGCCATGATGAGAGGAGGTAG 59.728 57.143 0.00 0.00 0.00 3.18
86 87 2.603021 GCCATGATGAGAGGAGGTAGA 58.397 52.381 0.00 0.00 0.00 2.59
87 88 2.968574 GCCATGATGAGAGGAGGTAGAA 59.031 50.000 0.00 0.00 0.00 2.10
88 89 3.389329 GCCATGATGAGAGGAGGTAGAAA 59.611 47.826 0.00 0.00 0.00 2.52
89 90 4.502950 GCCATGATGAGAGGAGGTAGAAAG 60.503 50.000 0.00 0.00 0.00 2.62
90 91 4.040217 CCATGATGAGAGGAGGTAGAAAGG 59.960 50.000 0.00 0.00 0.00 3.11
91 92 4.338795 TGATGAGAGGAGGTAGAAAGGT 57.661 45.455 0.00 0.00 0.00 3.50
92 93 5.467668 TGATGAGAGGAGGTAGAAAGGTA 57.532 43.478 0.00 0.00 0.00 3.08
93 94 5.450453 TGATGAGAGGAGGTAGAAAGGTAG 58.550 45.833 0.00 0.00 0.00 3.18
94 95 4.949966 TGAGAGGAGGTAGAAAGGTAGT 57.050 45.455 0.00 0.00 0.00 2.73
95 96 4.601084 TGAGAGGAGGTAGAAAGGTAGTG 58.399 47.826 0.00 0.00 0.00 2.74
96 97 3.955551 GAGAGGAGGTAGAAAGGTAGTGG 59.044 52.174 0.00 0.00 0.00 4.00
97 98 3.337301 AGAGGAGGTAGAAAGGTAGTGGT 59.663 47.826 0.00 0.00 0.00 4.16
98 99 3.700539 GAGGAGGTAGAAAGGTAGTGGTC 59.299 52.174 0.00 0.00 0.00 4.02
99 100 3.077088 AGGAGGTAGAAAGGTAGTGGTCA 59.923 47.826 0.00 0.00 0.00 4.02
100 101 3.836562 GGAGGTAGAAAGGTAGTGGTCAA 59.163 47.826 0.00 0.00 0.00 3.18
101 102 4.285260 GGAGGTAGAAAGGTAGTGGTCAAA 59.715 45.833 0.00 0.00 0.00 2.69
102 103 5.480205 GAGGTAGAAAGGTAGTGGTCAAAG 58.520 45.833 0.00 0.00 0.00 2.77
103 104 4.001652 GGTAGAAAGGTAGTGGTCAAAGC 58.998 47.826 0.00 0.00 0.00 3.51
104 105 4.262938 GGTAGAAAGGTAGTGGTCAAAGCT 60.263 45.833 0.00 0.00 0.00 3.74
105 106 5.046807 GGTAGAAAGGTAGTGGTCAAAGCTA 60.047 44.000 0.00 0.00 0.00 3.32
106 107 5.763876 AGAAAGGTAGTGGTCAAAGCTAT 57.236 39.130 0.00 0.00 0.00 2.97
107 108 6.128138 AGAAAGGTAGTGGTCAAAGCTATT 57.872 37.500 0.00 0.00 0.00 1.73
108 109 7.253905 AGAAAGGTAGTGGTCAAAGCTATTA 57.746 36.000 0.00 0.00 0.00 0.98
109 110 7.331791 AGAAAGGTAGTGGTCAAAGCTATTAG 58.668 38.462 0.00 0.00 0.00 1.73
110 111 5.615925 AGGTAGTGGTCAAAGCTATTAGG 57.384 43.478 0.00 0.00 0.00 2.69
111 112 5.278061 AGGTAGTGGTCAAAGCTATTAGGA 58.722 41.667 0.00 0.00 0.00 2.94
112 113 5.364157 AGGTAGTGGTCAAAGCTATTAGGAG 59.636 44.000 0.00 0.00 0.00 3.69
113 114 5.363005 GGTAGTGGTCAAAGCTATTAGGAGA 59.637 44.000 0.00 0.00 0.00 3.71
114 115 5.606348 AGTGGTCAAAGCTATTAGGAGAG 57.394 43.478 0.00 0.00 0.00 3.20
115 116 4.407296 AGTGGTCAAAGCTATTAGGAGAGG 59.593 45.833 0.00 0.00 0.00 3.69
116 117 3.711704 TGGTCAAAGCTATTAGGAGAGGG 59.288 47.826 0.00 0.00 0.00 4.30
117 118 3.712218 GGTCAAAGCTATTAGGAGAGGGT 59.288 47.826 0.00 0.00 0.00 4.34
118 119 4.443598 GGTCAAAGCTATTAGGAGAGGGTG 60.444 50.000 0.00 0.00 0.00 4.61
119 120 4.162509 GTCAAAGCTATTAGGAGAGGGTGT 59.837 45.833 0.00 0.00 0.00 4.16
120 121 5.363005 GTCAAAGCTATTAGGAGAGGGTGTA 59.637 44.000 0.00 0.00 0.00 2.90
121 122 5.962031 TCAAAGCTATTAGGAGAGGGTGTAA 59.038 40.000 0.00 0.00 0.00 2.41
122 123 6.615726 TCAAAGCTATTAGGAGAGGGTGTAAT 59.384 38.462 0.00 0.00 0.00 1.89
123 124 6.673839 AAGCTATTAGGAGAGGGTGTAATC 57.326 41.667 0.00 0.00 0.00 1.75
124 125 5.716979 AGCTATTAGGAGAGGGTGTAATCA 58.283 41.667 0.00 0.00 0.00 2.57
125 126 6.326970 AGCTATTAGGAGAGGGTGTAATCAT 58.673 40.000 0.00 0.00 0.00 2.45
126 127 6.212388 AGCTATTAGGAGAGGGTGTAATCATG 59.788 42.308 0.00 0.00 0.00 3.07
127 128 6.014156 GCTATTAGGAGAGGGTGTAATCATGT 60.014 42.308 0.00 0.00 0.00 3.21
128 129 6.831664 ATTAGGAGAGGGTGTAATCATGTT 57.168 37.500 0.00 0.00 0.00 2.71
129 130 7.931015 ATTAGGAGAGGGTGTAATCATGTTA 57.069 36.000 0.00 0.00 0.00 2.41
130 131 5.878406 AGGAGAGGGTGTAATCATGTTAG 57.122 43.478 0.00 0.00 0.00 2.34
131 132 4.101741 AGGAGAGGGTGTAATCATGTTAGC 59.898 45.833 0.00 0.00 0.00 3.09
132 133 4.381411 GAGAGGGTGTAATCATGTTAGCC 58.619 47.826 0.00 0.00 0.00 3.93
133 134 3.780294 AGAGGGTGTAATCATGTTAGCCA 59.220 43.478 0.00 0.00 0.00 4.75
134 135 3.877508 GAGGGTGTAATCATGTTAGCCAC 59.122 47.826 0.00 0.00 0.00 5.01
135 136 2.949644 GGGTGTAATCATGTTAGCCACC 59.050 50.000 12.64 12.64 40.05 4.61
136 137 3.371595 GGGTGTAATCATGTTAGCCACCT 60.372 47.826 17.35 0.00 40.49 4.00
137 138 4.270008 GGTGTAATCATGTTAGCCACCTT 58.730 43.478 13.34 0.00 38.24 3.50
138 139 5.433526 GGTGTAATCATGTTAGCCACCTTA 58.566 41.667 13.34 0.00 38.24 2.69
139 140 5.527582 GGTGTAATCATGTTAGCCACCTTAG 59.472 44.000 13.34 0.00 38.24 2.18
140 141 5.007724 GTGTAATCATGTTAGCCACCTTAGC 59.992 44.000 0.00 0.00 0.00 3.09
141 142 4.510167 AATCATGTTAGCCACCTTAGCT 57.490 40.909 0.00 0.00 44.49 3.32
142 143 4.510167 ATCATGTTAGCCACCTTAGCTT 57.490 40.909 0.00 0.00 41.83 3.74
143 144 3.609853 TCATGTTAGCCACCTTAGCTTG 58.390 45.455 0.00 0.00 41.83 4.01
144 145 2.489938 TGTTAGCCACCTTAGCTTGG 57.510 50.000 0.00 0.00 41.83 3.61
145 146 1.982226 TGTTAGCCACCTTAGCTTGGA 59.018 47.619 6.34 0.00 41.83 3.53
146 147 2.576191 TGTTAGCCACCTTAGCTTGGAT 59.424 45.455 6.34 2.09 41.83 3.41
147 148 3.206964 GTTAGCCACCTTAGCTTGGATC 58.793 50.000 6.34 0.00 41.83 3.36
148 149 0.179000 AGCCACCTTAGCTTGGATCG 59.821 55.000 6.34 0.00 37.24 3.69
149 150 0.815615 GCCACCTTAGCTTGGATCGG 60.816 60.000 6.34 7.42 34.46 4.18
150 151 0.541863 CCACCTTAGCTTGGATCGGT 59.458 55.000 11.74 0.00 34.46 4.69
151 152 1.760613 CCACCTTAGCTTGGATCGGTA 59.239 52.381 11.74 0.00 34.46 4.02
152 153 2.224066 CCACCTTAGCTTGGATCGGTAG 60.224 54.545 11.74 0.00 34.46 3.18
153 154 2.693591 CACCTTAGCTTGGATCGGTAGA 59.306 50.000 11.74 0.00 0.00 2.59
154 155 3.322254 CACCTTAGCTTGGATCGGTAGAT 59.678 47.826 11.74 0.00 40.38 1.98
155 156 3.322254 ACCTTAGCTTGGATCGGTAGATG 59.678 47.826 11.74 0.00 37.19 2.90
156 157 3.322254 CCTTAGCTTGGATCGGTAGATGT 59.678 47.826 0.00 0.00 37.19 3.06
157 158 2.898729 AGCTTGGATCGGTAGATGTG 57.101 50.000 0.00 0.00 37.19 3.21
158 159 2.388735 AGCTTGGATCGGTAGATGTGA 58.611 47.619 0.00 0.00 37.19 3.58
159 160 2.363680 AGCTTGGATCGGTAGATGTGAG 59.636 50.000 0.00 0.00 37.19 3.51
160 161 2.362397 GCTTGGATCGGTAGATGTGAGA 59.638 50.000 0.00 0.00 37.19 3.27
161 162 3.006323 GCTTGGATCGGTAGATGTGAGAT 59.994 47.826 0.00 0.00 37.19 2.75
162 163 4.218635 GCTTGGATCGGTAGATGTGAGATA 59.781 45.833 0.00 0.00 37.19 1.98
163 164 5.279006 GCTTGGATCGGTAGATGTGAGATAA 60.279 44.000 0.00 0.00 37.19 1.75
164 165 5.966742 TGGATCGGTAGATGTGAGATAAG 57.033 43.478 0.00 0.00 37.19 1.73
165 166 4.767409 TGGATCGGTAGATGTGAGATAAGG 59.233 45.833 0.00 0.00 37.19 2.69
166 167 5.010933 GGATCGGTAGATGTGAGATAAGGA 58.989 45.833 0.00 0.00 37.19 3.36
167 168 5.654650 GGATCGGTAGATGTGAGATAAGGAT 59.345 44.000 0.00 0.00 37.19 3.24
168 169 5.966742 TCGGTAGATGTGAGATAAGGATG 57.033 43.478 0.00 0.00 0.00 3.51
169 170 4.767409 TCGGTAGATGTGAGATAAGGATGG 59.233 45.833 0.00 0.00 0.00 3.51
170 171 4.619394 CGGTAGATGTGAGATAAGGATGGC 60.619 50.000 0.00 0.00 0.00 4.40
171 172 4.323104 GGTAGATGTGAGATAAGGATGGCC 60.323 50.000 0.00 0.00 0.00 5.36
172 173 2.301296 AGATGTGAGATAAGGATGGCCG 59.699 50.000 0.00 0.00 39.96 6.13
173 174 1.496060 TGTGAGATAAGGATGGCCGT 58.504 50.000 0.00 0.00 39.96 5.68
174 175 2.673258 TGTGAGATAAGGATGGCCGTA 58.327 47.619 0.00 0.00 39.96 4.02
175 176 3.239449 TGTGAGATAAGGATGGCCGTAT 58.761 45.455 0.00 0.00 40.85 3.06
176 177 3.006859 TGTGAGATAAGGATGGCCGTATG 59.993 47.826 0.00 0.00 38.70 2.39
177 178 2.567169 TGAGATAAGGATGGCCGTATGG 59.433 50.000 0.00 0.00 38.70 2.74
178 179 2.567615 GAGATAAGGATGGCCGTATGGT 59.432 50.000 0.00 0.00 38.70 3.55
179 180 2.979678 AGATAAGGATGGCCGTATGGTT 59.020 45.455 0.00 0.00 38.70 3.67
180 181 4.164981 AGATAAGGATGGCCGTATGGTTA 58.835 43.478 0.00 0.00 38.70 2.85
181 182 2.632987 AAGGATGGCCGTATGGTTAC 57.367 50.000 0.00 0.00 39.96 2.50
188 189 4.715983 CGTATGGTTACGGTCGGG 57.284 61.111 0.00 0.00 45.86 5.14
189 190 1.589727 CGTATGGTTACGGTCGGGC 60.590 63.158 0.00 0.00 45.86 6.13
190 191 1.516892 GTATGGTTACGGTCGGGCA 59.483 57.895 0.00 0.00 0.00 5.36
191 192 0.807275 GTATGGTTACGGTCGGGCAC 60.807 60.000 0.00 0.00 0.00 5.01
192 193 0.971959 TATGGTTACGGTCGGGCACT 60.972 55.000 0.00 0.00 0.00 4.40
193 194 0.971959 ATGGTTACGGTCGGGCACTA 60.972 55.000 0.00 0.00 0.00 2.74
194 195 1.184322 TGGTTACGGTCGGGCACTAA 61.184 55.000 0.00 0.00 0.00 2.24
195 196 0.459063 GGTTACGGTCGGGCACTAAG 60.459 60.000 0.00 0.00 0.00 2.18
196 197 0.527565 GTTACGGTCGGGCACTAAGA 59.472 55.000 0.00 0.00 0.00 2.10
197 198 0.813184 TTACGGTCGGGCACTAAGAG 59.187 55.000 0.00 0.00 0.00 2.85
198 199 1.033746 TACGGTCGGGCACTAAGAGG 61.034 60.000 0.00 0.00 0.00 3.69
199 200 2.901042 GGTCGGGCACTAAGAGGG 59.099 66.667 0.00 0.00 0.00 4.30
200 201 1.988406 GGTCGGGCACTAAGAGGGT 60.988 63.158 0.00 0.00 0.00 4.34
201 202 1.551019 GGTCGGGCACTAAGAGGGTT 61.551 60.000 0.00 0.00 0.00 4.11
202 203 0.391263 GTCGGGCACTAAGAGGGTTG 60.391 60.000 0.00 0.00 0.00 3.77
203 204 0.834687 TCGGGCACTAAGAGGGTTGT 60.835 55.000 0.00 0.00 0.00 3.32
204 205 0.899720 CGGGCACTAAGAGGGTTGTA 59.100 55.000 0.00 0.00 0.00 2.41
205 206 1.276989 CGGGCACTAAGAGGGTTGTAA 59.723 52.381 0.00 0.00 0.00 2.41
206 207 2.289819 CGGGCACTAAGAGGGTTGTAAA 60.290 50.000 0.00 0.00 0.00 2.01
221 222 5.554822 GTTGTAAACTTGTGTGAACTGGA 57.445 39.130 0.00 0.00 45.32 3.86
222 223 5.329493 GTTGTAAACTTGTGTGAACTGGAC 58.671 41.667 0.00 0.00 45.32 4.02
223 224 4.839121 TGTAAACTTGTGTGAACTGGACT 58.161 39.130 0.00 0.00 0.00 3.85
224 225 4.634004 TGTAAACTTGTGTGAACTGGACTG 59.366 41.667 0.00 0.00 0.00 3.51
225 226 3.350219 AACTTGTGTGAACTGGACTGT 57.650 42.857 0.00 0.00 0.00 3.55
226 227 4.481368 AACTTGTGTGAACTGGACTGTA 57.519 40.909 0.00 0.00 0.00 2.74
227 228 4.481368 ACTTGTGTGAACTGGACTGTAA 57.519 40.909 0.00 0.00 0.00 2.41
228 229 4.189231 ACTTGTGTGAACTGGACTGTAAC 58.811 43.478 0.00 0.00 0.00 2.50
229 230 2.816689 TGTGTGAACTGGACTGTAACG 58.183 47.619 0.00 0.00 0.00 3.18
230 231 2.166870 TGTGTGAACTGGACTGTAACGT 59.833 45.455 0.00 0.00 0.00 3.99
231 232 3.192466 GTGTGAACTGGACTGTAACGTT 58.808 45.455 5.88 5.88 0.00 3.99
232 233 3.244579 GTGTGAACTGGACTGTAACGTTC 59.755 47.826 2.82 0.00 35.69 3.95
233 234 2.798847 GTGAACTGGACTGTAACGTTCC 59.201 50.000 2.82 0.00 34.58 3.62
234 235 2.431419 TGAACTGGACTGTAACGTTCCA 59.569 45.455 2.82 4.67 34.58 3.53
236 237 2.080286 CTGGACTGTAACGTTCCAGG 57.920 55.000 22.74 7.19 42.97 4.45
237 238 1.343465 CTGGACTGTAACGTTCCAGGT 59.657 52.381 22.74 10.06 42.97 4.00
238 239 1.764134 TGGACTGTAACGTTCCAGGTT 59.236 47.619 22.74 4.87 32.90 3.50
239 240 2.964464 TGGACTGTAACGTTCCAGGTTA 59.036 45.455 22.74 7.33 32.90 2.85
240 241 3.387374 TGGACTGTAACGTTCCAGGTTAA 59.613 43.478 22.74 5.06 31.34 2.01
241 242 4.040706 TGGACTGTAACGTTCCAGGTTAAT 59.959 41.667 22.74 3.45 31.34 1.40
242 243 4.999311 GGACTGTAACGTTCCAGGTTAATT 59.001 41.667 22.74 2.75 31.34 1.40
243 244 6.165577 GGACTGTAACGTTCCAGGTTAATTA 58.834 40.000 22.74 0.00 31.34 1.40
244 245 6.650390 GGACTGTAACGTTCCAGGTTAATTAA 59.350 38.462 22.74 0.00 31.34 1.40
245 246 7.335171 GGACTGTAACGTTCCAGGTTAATTAAT 59.665 37.037 22.74 0.66 31.34 1.40
246 247 9.369904 GACTGTAACGTTCCAGGTTAATTAATA 57.630 33.333 22.74 0.00 31.34 0.98
247 248 9.895138 ACTGTAACGTTCCAGGTTAATTAATAT 57.105 29.630 22.74 0.00 31.34 1.28
253 254 9.551734 ACGTTCCAGGTTAATTAATATAGAACC 57.448 33.333 18.45 10.43 39.93 3.62
254 255 8.996271 CGTTCCAGGTTAATTAATATAGAACCC 58.004 37.037 18.45 8.09 40.41 4.11
263 264 9.886337 TTAATTAATATAGAACCCTTTTCCCCC 57.114 33.333 0.00 0.00 0.00 5.40
264 265 4.448720 AATATAGAACCCTTTTCCCCCG 57.551 45.455 0.00 0.00 0.00 5.73
265 266 0.257905 ATAGAACCCTTTTCCCCCGC 59.742 55.000 0.00 0.00 0.00 6.13
266 267 1.135068 TAGAACCCTTTTCCCCCGCA 61.135 55.000 0.00 0.00 0.00 5.69
267 268 1.532078 GAACCCTTTTCCCCCGCAA 60.532 57.895 0.00 0.00 0.00 4.85
268 269 1.075151 AACCCTTTTCCCCCGCAAA 60.075 52.632 0.00 0.00 0.00 3.68
269 270 0.472925 AACCCTTTTCCCCCGCAAAT 60.473 50.000 0.00 0.00 0.00 2.32
270 271 0.410270 ACCCTTTTCCCCCGCAAATA 59.590 50.000 0.00 0.00 0.00 1.40
271 272 1.203199 ACCCTTTTCCCCCGCAAATAA 60.203 47.619 0.00 0.00 0.00 1.40
272 273 1.903183 CCCTTTTCCCCCGCAAATAAA 59.097 47.619 0.00 0.00 0.00 1.40
273 274 2.303311 CCCTTTTCCCCCGCAAATAAAA 59.697 45.455 0.00 0.00 0.00 1.52
274 275 3.244596 CCCTTTTCCCCCGCAAATAAAAA 60.245 43.478 0.00 0.00 0.00 1.94
288 289 4.813346 AAAAACCTGGGCGACGAT 57.187 50.000 0.00 0.00 0.00 3.73
289 290 2.551644 AAAAACCTGGGCGACGATC 58.448 52.632 0.00 0.00 0.00 3.69
290 291 0.958876 AAAAACCTGGGCGACGATCC 60.959 55.000 0.00 0.00 0.00 3.36
291 292 2.814913 AAAACCTGGGCGACGATCCC 62.815 60.000 0.00 0.38 44.17 3.85
292 293 4.779733 ACCTGGGCGACGATCCCT 62.780 66.667 11.28 0.00 44.23 4.20
293 294 3.917760 CCTGGGCGACGATCCCTC 61.918 72.222 11.28 0.00 44.23 4.30
294 295 2.835431 CTGGGCGACGATCCCTCT 60.835 66.667 11.28 0.00 44.23 3.69
295 296 2.833582 TGGGCGACGATCCCTCTC 60.834 66.667 11.28 0.00 44.23 3.20
296 297 3.607661 GGGCGACGATCCCTCTCC 61.608 72.222 0.00 0.00 40.66 3.71
297 298 2.833582 GGCGACGATCCCTCTCCA 60.834 66.667 0.00 0.00 0.00 3.86
298 299 2.203771 GGCGACGATCCCTCTCCAT 61.204 63.158 0.00 0.00 0.00 3.41
299 300 1.742768 GCGACGATCCCTCTCCATT 59.257 57.895 0.00 0.00 0.00 3.16
300 301 0.105039 GCGACGATCCCTCTCCATTT 59.895 55.000 0.00 0.00 0.00 2.32
301 302 1.858091 CGACGATCCCTCTCCATTTG 58.142 55.000 0.00 0.00 0.00 2.32
302 303 1.539065 CGACGATCCCTCTCCATTTGG 60.539 57.143 0.00 0.00 0.00 3.28
303 304 0.839946 ACGATCCCTCTCCATTTGGG 59.160 55.000 0.00 0.00 42.20 4.12
304 305 0.839946 CGATCCCTCTCCATTTGGGT 59.160 55.000 0.00 0.00 41.58 4.51
305 306 2.047061 CGATCCCTCTCCATTTGGGTA 58.953 52.381 0.00 0.00 41.58 3.69
306 307 2.037772 CGATCCCTCTCCATTTGGGTAG 59.962 54.545 0.00 0.00 41.58 3.18
307 308 2.961536 TCCCTCTCCATTTGGGTAGA 57.038 50.000 0.00 0.00 41.58 2.59
308 309 3.214694 TCCCTCTCCATTTGGGTAGAA 57.785 47.619 0.00 0.00 41.58 2.10
309 310 2.844348 TCCCTCTCCATTTGGGTAGAAC 59.156 50.000 0.00 0.00 41.58 3.01
310 311 2.576191 CCCTCTCCATTTGGGTAGAACA 59.424 50.000 0.00 0.00 38.11 3.18
311 312 3.203040 CCCTCTCCATTTGGGTAGAACAT 59.797 47.826 0.00 0.00 38.11 2.71
312 313 4.202441 CCTCTCCATTTGGGTAGAACATG 58.798 47.826 0.00 0.00 38.11 3.21
313 314 3.620488 TCTCCATTTGGGTAGAACATGC 58.380 45.455 0.00 0.00 38.11 4.06
314 315 3.266772 TCTCCATTTGGGTAGAACATGCT 59.733 43.478 0.00 0.00 38.11 3.79
315 316 4.019174 CTCCATTTGGGTAGAACATGCTT 58.981 43.478 0.00 0.00 38.11 3.91
316 317 5.045213 TCTCCATTTGGGTAGAACATGCTTA 60.045 40.000 0.00 0.00 38.11 3.09
317 318 5.192927 TCCATTTGGGTAGAACATGCTTAG 58.807 41.667 0.00 0.00 38.11 2.18
318 319 4.339247 CCATTTGGGTAGAACATGCTTAGG 59.661 45.833 0.00 0.00 0.00 2.69
319 320 4.650972 TTTGGGTAGAACATGCTTAGGT 57.349 40.909 0.00 0.00 0.00 3.08
320 321 5.765576 TTTGGGTAGAACATGCTTAGGTA 57.234 39.130 0.00 0.00 0.00 3.08
321 322 4.748277 TGGGTAGAACATGCTTAGGTAC 57.252 45.455 0.00 0.00 0.00 3.34
322 323 4.359105 TGGGTAGAACATGCTTAGGTACT 58.641 43.478 0.00 0.00 46.37 2.73
323 324 4.404715 TGGGTAGAACATGCTTAGGTACTC 59.595 45.833 0.00 0.00 41.75 2.59
324 325 4.202233 GGGTAGAACATGCTTAGGTACTCC 60.202 50.000 0.00 0.00 41.75 3.85
325 326 4.202233 GGTAGAACATGCTTAGGTACTCCC 60.202 50.000 0.00 0.00 41.75 4.30
326 327 3.450904 AGAACATGCTTAGGTACTCCCA 58.549 45.455 0.00 0.00 41.75 4.37
327 328 3.452627 AGAACATGCTTAGGTACTCCCAG 59.547 47.826 0.00 0.00 41.75 4.45
328 329 3.116096 ACATGCTTAGGTACTCCCAGA 57.884 47.619 0.00 0.00 41.75 3.86
329 330 3.658725 ACATGCTTAGGTACTCCCAGAT 58.341 45.455 0.00 0.00 41.75 2.90
330 331 4.816126 ACATGCTTAGGTACTCCCAGATA 58.184 43.478 0.00 0.00 41.75 1.98
331 332 4.835615 ACATGCTTAGGTACTCCCAGATAG 59.164 45.833 0.00 0.00 41.75 2.08
332 333 3.845860 TGCTTAGGTACTCCCAGATAGG 58.154 50.000 0.00 0.00 41.75 2.57
333 334 2.563620 GCTTAGGTACTCCCAGATAGGC 59.436 54.545 0.00 0.00 41.75 3.93
334 335 3.755812 GCTTAGGTACTCCCAGATAGGCT 60.756 52.174 0.00 0.00 41.75 4.58
335 336 4.508763 GCTTAGGTACTCCCAGATAGGCTA 60.509 50.000 0.00 0.00 41.75 3.93
336 337 3.529216 AGGTACTCCCAGATAGGCTAC 57.471 52.381 0.00 0.00 35.39 3.58
337 338 3.065175 AGGTACTCCCAGATAGGCTACT 58.935 50.000 0.00 0.00 35.39 2.57
338 339 3.467863 AGGTACTCCCAGATAGGCTACTT 59.532 47.826 0.00 0.00 35.39 2.24
339 340 3.574826 GGTACTCCCAGATAGGCTACTTG 59.425 52.174 0.00 0.00 35.39 3.16
340 341 3.406512 ACTCCCAGATAGGCTACTTGT 57.593 47.619 0.00 0.00 35.39 3.16
341 342 3.725634 ACTCCCAGATAGGCTACTTGTT 58.274 45.455 0.00 0.00 35.39 2.83
342 343 3.452627 ACTCCCAGATAGGCTACTTGTTG 59.547 47.826 0.00 0.00 35.39 3.33
343 344 3.450904 TCCCAGATAGGCTACTTGTTGT 58.549 45.455 0.00 0.00 35.39 3.32
344 345 3.197766 TCCCAGATAGGCTACTTGTTGTG 59.802 47.826 0.00 0.00 35.39 3.33
345 346 2.939103 CCAGATAGGCTACTTGTTGTGC 59.061 50.000 0.00 0.00 0.00 4.57
346 347 3.369892 CCAGATAGGCTACTTGTTGTGCT 60.370 47.826 0.00 0.00 0.00 4.40
347 348 3.620374 CAGATAGGCTACTTGTTGTGCTG 59.380 47.826 0.00 0.00 0.00 4.41
348 349 3.515502 AGATAGGCTACTTGTTGTGCTGA 59.484 43.478 0.00 0.00 0.00 4.26
349 350 1.884235 AGGCTACTTGTTGTGCTGAC 58.116 50.000 0.00 0.00 0.00 3.51
350 351 1.140852 AGGCTACTTGTTGTGCTGACA 59.859 47.619 0.00 0.00 0.00 3.58
351 352 2.154462 GGCTACTTGTTGTGCTGACAT 58.846 47.619 0.00 0.00 30.13 3.06
352 353 2.095567 GGCTACTTGTTGTGCTGACATG 60.096 50.000 0.00 0.00 30.13 3.21
353 354 2.549754 GCTACTTGTTGTGCTGACATGT 59.450 45.455 0.00 0.00 38.46 3.21
354 355 3.607775 GCTACTTGTTGTGCTGACATGTG 60.608 47.826 1.15 0.00 36.46 3.21
355 356 1.677576 ACTTGTTGTGCTGACATGTGG 59.322 47.619 1.15 0.00 35.06 4.17
356 357 1.948834 CTTGTTGTGCTGACATGTGGA 59.051 47.619 1.15 0.00 30.13 4.02
357 358 1.308047 TGTTGTGCTGACATGTGGAC 58.692 50.000 1.15 1.33 30.13 4.02
358 359 0.593128 GTTGTGCTGACATGTGGACC 59.407 55.000 1.15 0.00 30.13 4.46
359 360 0.537143 TTGTGCTGACATGTGGACCC 60.537 55.000 1.15 0.00 30.13 4.46
360 361 1.073025 GTGCTGACATGTGGACCCA 59.927 57.895 1.15 0.00 0.00 4.51
361 362 0.537143 GTGCTGACATGTGGACCCAA 60.537 55.000 1.15 0.00 0.00 4.12
362 363 0.184692 TGCTGACATGTGGACCCAAA 59.815 50.000 1.15 0.00 0.00 3.28
363 364 0.598065 GCTGACATGTGGACCCAAAC 59.402 55.000 1.15 0.00 0.00 2.93
364 365 1.819305 GCTGACATGTGGACCCAAACT 60.819 52.381 1.15 0.00 0.00 2.66
365 366 1.881973 CTGACATGTGGACCCAAACTG 59.118 52.381 1.15 0.00 0.00 3.16
366 367 1.247567 GACATGTGGACCCAAACTGG 58.752 55.000 1.15 0.00 37.25 4.00
367 368 0.850100 ACATGTGGACCCAAACTGGA 59.150 50.000 0.00 0.00 40.96 3.86
368 369 1.216678 ACATGTGGACCCAAACTGGAA 59.783 47.619 0.00 0.00 40.96 3.53
369 370 2.315176 CATGTGGACCCAAACTGGAAA 58.685 47.619 0.00 0.00 40.96 3.13
370 371 2.534042 TGTGGACCCAAACTGGAAAA 57.466 45.000 0.00 0.00 40.96 2.29
371 372 2.821437 TGTGGACCCAAACTGGAAAAA 58.179 42.857 0.00 0.00 40.96 1.94
372 373 2.763448 TGTGGACCCAAACTGGAAAAAG 59.237 45.455 0.00 0.00 40.96 2.27
373 374 3.028130 GTGGACCCAAACTGGAAAAAGA 58.972 45.455 0.00 0.00 40.96 2.52
374 375 3.068165 GTGGACCCAAACTGGAAAAAGAG 59.932 47.826 0.00 0.00 40.96 2.85
375 376 3.296854 GGACCCAAACTGGAAAAAGAGT 58.703 45.455 0.00 0.00 40.96 3.24
376 377 4.079672 TGGACCCAAACTGGAAAAAGAGTA 60.080 41.667 0.00 0.00 40.96 2.59
377 378 4.519350 GGACCCAAACTGGAAAAAGAGTAG 59.481 45.833 0.00 0.00 40.96 2.57
378 379 5.374071 GACCCAAACTGGAAAAAGAGTAGA 58.626 41.667 0.00 0.00 40.96 2.59
379 380 5.377478 ACCCAAACTGGAAAAAGAGTAGAG 58.623 41.667 0.00 0.00 40.96 2.43
380 381 5.132144 ACCCAAACTGGAAAAAGAGTAGAGA 59.868 40.000 0.00 0.00 40.96 3.10
381 382 6.062095 CCCAAACTGGAAAAAGAGTAGAGAA 58.938 40.000 0.00 0.00 40.96 2.87
382 383 6.546034 CCCAAACTGGAAAAAGAGTAGAGAAA 59.454 38.462 0.00 0.00 40.96 2.52
383 384 7.068226 CCCAAACTGGAAAAAGAGTAGAGAAAA 59.932 37.037 0.00 0.00 40.96 2.29
384 385 8.466798 CCAAACTGGAAAAAGAGTAGAGAAAAA 58.533 33.333 0.00 0.00 40.96 1.94
435 436 7.652909 ACAATGATGACAGGTGTGTTATTTTTG 59.347 33.333 0.00 0.00 36.88 2.44
438 439 6.319911 TGATGACAGGTGTGTTATTTTTGACA 59.680 34.615 0.00 0.00 36.88 3.58
439 440 6.516739 TGACAGGTGTGTTATTTTTGACAA 57.483 33.333 0.00 0.00 36.88 3.18
440 441 6.925211 TGACAGGTGTGTTATTTTTGACAAA 58.075 32.000 0.00 0.00 36.88 2.83
441 442 7.032580 TGACAGGTGTGTTATTTTTGACAAAG 58.967 34.615 0.10 0.00 36.88 2.77
444 445 7.544217 ACAGGTGTGTTATTTTTGACAAAGAAC 59.456 33.333 0.10 7.80 30.30 3.01
479 480 1.529744 ACAGGGAAAAGACAAGGGGA 58.470 50.000 0.00 0.00 0.00 4.81
480 481 1.856920 ACAGGGAAAAGACAAGGGGAA 59.143 47.619 0.00 0.00 0.00 3.97
487 488 3.751479 AAAGACAAGGGGAAAATGTGC 57.249 42.857 0.00 0.00 0.00 4.57
492 493 2.777114 ACAAGGGGAAAATGTGCCTTTT 59.223 40.909 0.00 0.00 34.53 2.27
493 494 3.201930 ACAAGGGGAAAATGTGCCTTTTT 59.798 39.130 0.00 0.00 34.53 1.94
519 520 3.511540 TCTGTTGAGATGAGTACACCCTG 59.488 47.826 0.00 0.00 0.00 4.45
576 593 6.418946 TGTTTATGCCAGTGATGTATTACCA 58.581 36.000 0.00 0.00 0.00 3.25
615 642 4.655649 TCAGCTGTGGTGTATAGATCCAAT 59.344 41.667 14.67 0.00 32.82 3.16
686 714 1.817447 AGACGCAACTACTGGTAGGTC 59.183 52.381 11.73 8.92 37.49 3.85
768 796 8.985315 TTGCATAATTTGATATGAGAAGACCT 57.015 30.769 0.00 0.00 35.69 3.85
789 817 0.250684 TTGAAGGGTGATTGAGCGCA 60.251 50.000 11.47 0.00 0.00 6.09
790 818 0.035152 TGAAGGGTGATTGAGCGCAT 60.035 50.000 11.47 0.00 0.00 4.73
791 819 1.209261 TGAAGGGTGATTGAGCGCATA 59.791 47.619 11.47 0.00 0.00 3.14
794 822 1.210478 AGGGTGATTGAGCGCATAAGT 59.790 47.619 11.47 0.00 0.00 2.24
796 824 2.223340 GGGTGATTGAGCGCATAAGTTG 60.223 50.000 11.47 0.00 0.00 3.16
828 860 6.127814 ACACATGAGTTGCTTTGATATTCTGG 60.128 38.462 0.00 0.00 0.00 3.86
862 904 6.169094 ACTTGGTCTTCTGTTGAGATGTATG 58.831 40.000 0.00 0.00 0.00 2.39
933 1903 2.775890 GTCCATTGCTGATCATCCGAT 58.224 47.619 0.00 0.00 33.31 4.18
935 1905 2.105306 TCCATTGCTGATCATCCGATGT 59.895 45.455 16.56 0.00 29.66 3.06
951 1921 4.459089 GTGCTCGAGCCCAGACCC 62.459 72.222 33.23 9.46 41.18 4.46
953 1923 3.394836 GCTCGAGCCCAGACCCTT 61.395 66.667 27.22 0.00 34.31 3.95
954 1924 2.960688 GCTCGAGCCCAGACCCTTT 61.961 63.158 27.22 0.00 34.31 3.11
955 1925 1.614241 GCTCGAGCCCAGACCCTTTA 61.614 60.000 27.22 0.00 34.31 1.85
956 1926 0.175989 CTCGAGCCCAGACCCTTTAC 59.824 60.000 0.00 0.00 0.00 2.01
957 1927 1.153628 CGAGCCCAGACCCTTTACG 60.154 63.158 0.00 0.00 0.00 3.18
958 1928 1.601419 CGAGCCCAGACCCTTTACGA 61.601 60.000 0.00 0.00 0.00 3.43
959 1929 0.108281 GAGCCCAGACCCTTTACGAC 60.108 60.000 0.00 0.00 0.00 4.34
960 1930 0.834687 AGCCCAGACCCTTTACGACA 60.835 55.000 0.00 0.00 0.00 4.35
962 1932 1.339727 GCCCAGACCCTTTACGACATT 60.340 52.381 0.00 0.00 0.00 2.71
970 1942 7.866393 CCAGACCCTTTACGACATTATAAGTAG 59.134 40.741 0.00 0.00 0.00 2.57
975 1947 7.595502 CCCTTTACGACATTATAAGTAGCTCAG 59.404 40.741 0.00 0.00 0.00 3.35
983 1955 9.587772 GACATTATAAGTAGCTCAGAAACTTGA 57.412 33.333 8.74 0.00 35.23 3.02
995 1967 4.219507 TCAGAAACTTGAGCCTCTCTACTG 59.780 45.833 0.00 0.00 0.00 2.74
998 1970 5.417580 AGAAACTTGAGCCTCTCTACTGTAG 59.582 44.000 8.55 8.55 0.00 2.74
1016 1990 2.822707 AGCCTACTCCTCCGAAACTA 57.177 50.000 0.00 0.00 0.00 2.24
1017 1991 2.657143 AGCCTACTCCTCCGAAACTAG 58.343 52.381 0.00 0.00 0.00 2.57
1018 1992 1.067364 GCCTACTCCTCCGAAACTAGC 59.933 57.143 0.00 0.00 0.00 3.42
1019 1993 1.682323 CCTACTCCTCCGAAACTAGCC 59.318 57.143 0.00 0.00 0.00 3.93
1023 1997 2.241685 ACTCCTCCGAAACTAGCCTCTA 59.758 50.000 0.00 0.00 0.00 2.43
1036 2010 1.949847 GCCTCTAGGACGCAGCAAGA 61.950 60.000 0.00 0.00 37.39 3.02
1299 2282 3.234630 TTTCCCTGACGTCGGGCTG 62.235 63.158 34.08 22.81 41.69 4.85
1321 2304 2.352032 CCGGGCCTCGAGAACTTCT 61.352 63.158 15.71 0.00 42.43 2.85
1513 2496 1.744368 CTCGGCAGCAGCATGTTCT 60.744 57.895 2.65 0.00 44.61 3.01
1679 2674 0.321671 CACTGGGCCTTCTTCGAGAA 59.678 55.000 4.53 0.00 32.50 2.87
1752 2747 2.490217 CTGGAGCCGGACTACGTG 59.510 66.667 5.05 0.00 42.24 4.49
1991 2986 2.888863 CCTCGACCTCTCAGGCAC 59.111 66.667 0.00 0.00 39.63 5.01
2103 3106 3.864686 CGCGGGTTCATCTTGCGG 61.865 66.667 0.00 0.00 44.65 5.69
2397 3415 0.645868 GCGACGCCATACAGAAGAAC 59.354 55.000 9.14 0.00 0.00 3.01
2537 3559 3.316071 AGCTGGCTGATCGATATTGAG 57.684 47.619 0.00 0.00 0.00 3.02
2538 3560 2.632028 AGCTGGCTGATCGATATTGAGT 59.368 45.455 0.00 0.00 0.00 3.41
2539 3561 3.070734 AGCTGGCTGATCGATATTGAGTT 59.929 43.478 0.00 0.00 0.00 3.01
2540 3562 4.281941 AGCTGGCTGATCGATATTGAGTTA 59.718 41.667 0.00 0.00 0.00 2.24
2541 3563 5.046735 AGCTGGCTGATCGATATTGAGTTAT 60.047 40.000 0.00 0.00 0.00 1.89
2542 3564 5.641209 GCTGGCTGATCGATATTGAGTTATT 59.359 40.000 0.00 0.00 0.00 1.40
2543 3565 6.401903 GCTGGCTGATCGATATTGAGTTATTG 60.402 42.308 0.00 0.00 0.00 1.90
2544 3566 6.758254 TGGCTGATCGATATTGAGTTATTGA 58.242 36.000 0.00 0.00 0.00 2.57
2545 3567 6.646653 TGGCTGATCGATATTGAGTTATTGAC 59.353 38.462 0.00 0.00 0.00 3.18
2546 3568 6.091441 GGCTGATCGATATTGAGTTATTGACC 59.909 42.308 0.00 0.00 0.00 4.02
2547 3569 6.646653 GCTGATCGATATTGAGTTATTGACCA 59.353 38.462 0.00 0.00 0.00 4.02
2560 3582 1.234821 TTGACCACATGGCTCGTTTC 58.765 50.000 0.00 0.00 39.32 2.78
2561 3583 0.107643 TGACCACATGGCTCGTTTCA 59.892 50.000 0.00 0.00 39.32 2.69
2563 3585 0.108585 ACCACATGGCTCGTTTCACT 59.891 50.000 0.00 0.00 39.32 3.41
2564 3586 1.238439 CCACATGGCTCGTTTCACTT 58.762 50.000 0.00 0.00 0.00 3.16
2565 3587 1.608590 CCACATGGCTCGTTTCACTTT 59.391 47.619 0.00 0.00 0.00 2.66
2566 3588 2.034558 CCACATGGCTCGTTTCACTTTT 59.965 45.455 0.00 0.00 0.00 2.27
2567 3589 3.300009 CACATGGCTCGTTTCACTTTTC 58.700 45.455 0.00 0.00 0.00 2.29
2568 3590 3.003689 CACATGGCTCGTTTCACTTTTCT 59.996 43.478 0.00 0.00 0.00 2.52
2569 3591 3.003689 ACATGGCTCGTTTCACTTTTCTG 59.996 43.478 0.00 0.00 0.00 3.02
2570 3592 2.639065 TGGCTCGTTTCACTTTTCTGT 58.361 42.857 0.00 0.00 0.00 3.41
2571 3593 3.013921 TGGCTCGTTTCACTTTTCTGTT 58.986 40.909 0.00 0.00 0.00 3.16
2572 3594 3.442273 TGGCTCGTTTCACTTTTCTGTTT 59.558 39.130 0.00 0.00 0.00 2.83
2573 3595 4.082463 TGGCTCGTTTCACTTTTCTGTTTT 60.082 37.500 0.00 0.00 0.00 2.43
2574 3596 4.862574 GGCTCGTTTCACTTTTCTGTTTTT 59.137 37.500 0.00 0.00 0.00 1.94
2634 3656 4.443913 TTGGCTGATCAATCACAATGTG 57.556 40.909 7.12 7.12 32.50 3.21
2635 3657 3.688235 TGGCTGATCAATCACAATGTGA 58.312 40.909 19.08 19.08 46.90 3.58
2636 3658 3.692593 TGGCTGATCAATCACAATGTGAG 59.307 43.478 21.23 9.09 46.04 3.51
2637 3659 3.488721 GGCTGATCAATCACAATGTGAGC 60.489 47.826 21.23 15.88 46.04 4.26
2638 3660 3.128068 GCTGATCAATCACAATGTGAGCA 59.872 43.478 21.23 12.25 46.04 4.26
2639 3661 4.380128 GCTGATCAATCACAATGTGAGCAA 60.380 41.667 21.23 9.19 46.04 3.91
2640 3662 5.678871 GCTGATCAATCACAATGTGAGCAAT 60.679 40.000 21.23 13.26 46.04 3.56
2641 3663 6.275494 TGATCAATCACAATGTGAGCAATT 57.725 33.333 21.23 8.08 46.04 2.32
2642 3664 6.693466 TGATCAATCACAATGTGAGCAATTT 58.307 32.000 21.23 7.71 46.04 1.82
2643 3665 6.588373 TGATCAATCACAATGTGAGCAATTTG 59.412 34.615 21.23 18.43 46.04 2.32
2644 3666 5.845103 TCAATCACAATGTGAGCAATTTGT 58.155 33.333 21.23 0.00 46.04 2.83
2645 3667 6.282167 TCAATCACAATGTGAGCAATTTGTT 58.718 32.000 21.23 5.58 46.04 2.83
2646 3668 7.432059 TCAATCACAATGTGAGCAATTTGTTA 58.568 30.769 21.23 3.62 46.04 2.41
2656 3678 9.762933 ATGTGAGCAATTTGTTATTGTAAAGTT 57.237 25.926 0.00 0.00 0.00 2.66
2657 3679 9.593134 TGTGAGCAATTTGTTATTGTAAAGTTT 57.407 25.926 0.00 0.00 0.00 2.66
3130 4162 4.529716 ACTCCTTTTAAAACCCTGTGGA 57.470 40.909 0.00 0.68 34.81 4.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.275856 TGGGTTGGAAATCATTGCAGC 59.724 47.619 0.00 0.00 38.19 5.25
1 2 3.735820 CGATGGGTTGGAAATCATTGCAG 60.736 47.826 0.00 0.00 38.19 4.41
3 4 2.481795 CCGATGGGTTGGAAATCATTGC 60.482 50.000 0.00 0.00 0.00 3.56
4 5 3.023119 TCCGATGGGTTGGAAATCATTG 58.977 45.455 0.00 0.00 34.84 2.82
5 6 3.053693 TCTCCGATGGGTTGGAAATCATT 60.054 43.478 0.00 0.00 37.46 2.57
6 7 2.509548 TCTCCGATGGGTTGGAAATCAT 59.490 45.455 0.00 0.00 37.46 2.45
7 8 1.912731 TCTCCGATGGGTTGGAAATCA 59.087 47.619 0.00 0.00 37.46 2.57
8 9 2.683362 GTTCTCCGATGGGTTGGAAATC 59.317 50.000 0.00 0.00 37.46 2.17
9 10 2.041081 TGTTCTCCGATGGGTTGGAAAT 59.959 45.455 0.00 0.00 37.46 2.17
10 11 1.422024 TGTTCTCCGATGGGTTGGAAA 59.578 47.619 0.00 0.00 37.46 3.13
11 12 1.060729 TGTTCTCCGATGGGTTGGAA 58.939 50.000 0.00 0.00 37.46 3.53
12 13 1.285280 ATGTTCTCCGATGGGTTGGA 58.715 50.000 0.00 0.00 36.44 3.53
13 14 3.181455 TGATATGTTCTCCGATGGGTTGG 60.181 47.826 0.00 0.00 33.83 3.77
14 15 3.809832 GTGATATGTTCTCCGATGGGTTG 59.190 47.826 0.00 0.00 33.83 3.77
15 16 3.454447 TGTGATATGTTCTCCGATGGGTT 59.546 43.478 0.00 0.00 33.83 4.11
16 17 3.038280 TGTGATATGTTCTCCGATGGGT 58.962 45.455 0.00 0.00 33.83 4.51
17 18 3.751479 TGTGATATGTTCTCCGATGGG 57.249 47.619 0.00 0.00 0.00 4.00
18 19 4.441792 TGTTGTGATATGTTCTCCGATGG 58.558 43.478 0.00 0.00 0.00 3.51
19 20 5.559608 GCATGTTGTGATATGTTCTCCGATG 60.560 44.000 0.00 0.00 0.00 3.84
20 21 4.512944 GCATGTTGTGATATGTTCTCCGAT 59.487 41.667 0.00 0.00 0.00 4.18
21 22 3.871006 GCATGTTGTGATATGTTCTCCGA 59.129 43.478 0.00 0.00 0.00 4.55
22 23 3.002656 GGCATGTTGTGATATGTTCTCCG 59.997 47.826 0.00 0.00 0.00 4.63
23 24 3.002656 CGGCATGTTGTGATATGTTCTCC 59.997 47.826 0.00 0.00 0.00 3.71
24 25 3.546815 GCGGCATGTTGTGATATGTTCTC 60.547 47.826 0.00 0.00 0.00 2.87
25 26 2.355756 GCGGCATGTTGTGATATGTTCT 59.644 45.455 0.00 0.00 0.00 3.01
26 27 2.541588 GGCGGCATGTTGTGATATGTTC 60.542 50.000 3.07 0.00 0.00 3.18
27 28 1.405105 GGCGGCATGTTGTGATATGTT 59.595 47.619 3.07 0.00 0.00 2.71
28 29 1.024271 GGCGGCATGTTGTGATATGT 58.976 50.000 3.07 0.00 0.00 2.29
29 30 1.023502 TGGCGGCATGTTGTGATATG 58.976 50.000 7.97 0.00 0.00 1.78
30 31 1.881973 GATGGCGGCATGTTGTGATAT 59.118 47.619 30.87 0.62 0.00 1.63
31 32 1.308047 GATGGCGGCATGTTGTGATA 58.692 50.000 30.87 0.00 0.00 2.15
32 33 1.717791 CGATGGCGGCATGTTGTGAT 61.718 55.000 30.87 2.44 0.00 3.06
33 34 2.397754 CGATGGCGGCATGTTGTGA 61.398 57.895 30.87 0.00 0.00 3.58
34 35 2.100797 CGATGGCGGCATGTTGTG 59.899 61.111 30.87 9.57 0.00 3.33
35 36 2.359850 ACGATGGCGGCATGTTGT 60.360 55.556 30.87 20.60 43.17 3.32
43 44 2.427540 GATCTCCTGGACGATGGCGG 62.428 65.000 11.69 0.00 43.17 6.13
44 45 1.006805 GATCTCCTGGACGATGGCG 60.007 63.158 11.69 0.00 44.79 5.69
45 46 1.006805 CGATCTCCTGGACGATGGC 60.007 63.158 11.69 1.24 0.00 4.40
46 47 1.006805 GCGATCTCCTGGACGATGG 60.007 63.158 9.12 10.33 0.00 3.51
47 48 1.006805 GGCGATCTCCTGGACGATG 60.007 63.158 9.12 5.70 0.00 3.84
48 49 2.556459 CGGCGATCTCCTGGACGAT 61.556 63.158 0.00 8.49 0.00 3.73
49 50 3.209812 CGGCGATCTCCTGGACGA 61.210 66.667 0.00 4.18 0.00 4.20
50 51 4.933064 GCGGCGATCTCCTGGACG 62.933 72.222 12.98 0.00 0.00 4.79
51 52 4.593864 GGCGGCGATCTCCTGGAC 62.594 72.222 12.98 0.00 0.00 4.02
53 54 3.933722 ATGGCGGCGATCTCCTGG 61.934 66.667 12.98 0.00 0.00 4.45
54 55 2.446142 ATCATGGCGGCGATCTCCTG 62.446 60.000 12.98 2.92 0.00 3.86
55 56 2.212811 ATCATGGCGGCGATCTCCT 61.213 57.895 12.98 0.00 0.00 3.69
56 57 2.031516 CATCATGGCGGCGATCTCC 61.032 63.158 12.98 1.84 0.00 3.71
57 58 1.005748 TCATCATGGCGGCGATCTC 60.006 57.895 12.98 0.00 0.00 2.75
58 59 1.005275 CTCATCATGGCGGCGATCT 60.005 57.895 12.98 0.00 0.00 2.75
59 60 1.005748 TCTCATCATGGCGGCGATC 60.006 57.895 12.98 1.66 0.00 3.69
60 61 1.005275 CTCTCATCATGGCGGCGAT 60.005 57.895 12.98 0.00 0.00 4.58
61 62 2.418777 CTCTCATCATGGCGGCGA 59.581 61.111 12.98 0.00 0.00 5.54
62 63 2.664185 CCTCTCATCATGGCGGCG 60.664 66.667 0.51 0.51 0.00 6.46
63 64 1.301558 CTCCTCTCATCATGGCGGC 60.302 63.158 0.00 0.00 0.00 6.53
64 65 1.370437 CCTCCTCTCATCATGGCGG 59.630 63.158 0.00 0.00 0.00 6.13
65 66 1.271934 CTACCTCCTCTCATCATGGCG 59.728 57.143 0.00 0.00 0.00 5.69
66 67 2.603021 TCTACCTCCTCTCATCATGGC 58.397 52.381 0.00 0.00 0.00 4.40
67 68 4.040217 CCTTTCTACCTCCTCTCATCATGG 59.960 50.000 0.00 0.00 0.00 3.66
68 69 4.653341 ACCTTTCTACCTCCTCTCATCATG 59.347 45.833 0.00 0.00 0.00 3.07
69 70 4.889780 ACCTTTCTACCTCCTCTCATCAT 58.110 43.478 0.00 0.00 0.00 2.45
70 71 4.338795 ACCTTTCTACCTCCTCTCATCA 57.661 45.455 0.00 0.00 0.00 3.07
71 72 5.300792 CACTACCTTTCTACCTCCTCTCATC 59.699 48.000 0.00 0.00 0.00 2.92
72 73 5.205056 CACTACCTTTCTACCTCCTCTCAT 58.795 45.833 0.00 0.00 0.00 2.90
73 74 4.570079 CCACTACCTTTCTACCTCCTCTCA 60.570 50.000 0.00 0.00 0.00 3.27
74 75 3.955551 CCACTACCTTTCTACCTCCTCTC 59.044 52.174 0.00 0.00 0.00 3.20
75 76 3.337301 ACCACTACCTTTCTACCTCCTCT 59.663 47.826 0.00 0.00 0.00 3.69
76 77 3.700539 GACCACTACCTTTCTACCTCCTC 59.299 52.174 0.00 0.00 0.00 3.71
77 78 3.077088 TGACCACTACCTTTCTACCTCCT 59.923 47.826 0.00 0.00 0.00 3.69
78 79 3.438183 TGACCACTACCTTTCTACCTCC 58.562 50.000 0.00 0.00 0.00 4.30
79 80 5.479124 TTTGACCACTACCTTTCTACCTC 57.521 43.478 0.00 0.00 0.00 3.85
80 81 4.262938 GCTTTGACCACTACCTTTCTACCT 60.263 45.833 0.00 0.00 0.00 3.08
81 82 4.001652 GCTTTGACCACTACCTTTCTACC 58.998 47.826 0.00 0.00 0.00 3.18
82 83 4.895961 AGCTTTGACCACTACCTTTCTAC 58.104 43.478 0.00 0.00 0.00 2.59
83 84 6.869206 ATAGCTTTGACCACTACCTTTCTA 57.131 37.500 0.00 0.00 0.00 2.10
84 85 5.763876 ATAGCTTTGACCACTACCTTTCT 57.236 39.130 0.00 0.00 0.00 2.52
85 86 6.539103 CCTAATAGCTTTGACCACTACCTTTC 59.461 42.308 0.00 0.00 0.00 2.62
86 87 6.214819 TCCTAATAGCTTTGACCACTACCTTT 59.785 38.462 0.00 0.00 0.00 3.11
87 88 5.724854 TCCTAATAGCTTTGACCACTACCTT 59.275 40.000 0.00 0.00 0.00 3.50
88 89 5.278061 TCCTAATAGCTTTGACCACTACCT 58.722 41.667 0.00 0.00 0.00 3.08
89 90 5.363005 TCTCCTAATAGCTTTGACCACTACC 59.637 44.000 0.00 0.00 0.00 3.18
90 91 6.461788 CCTCTCCTAATAGCTTTGACCACTAC 60.462 46.154 0.00 0.00 0.00 2.73
91 92 5.598830 CCTCTCCTAATAGCTTTGACCACTA 59.401 44.000 0.00 0.00 0.00 2.74
92 93 4.407296 CCTCTCCTAATAGCTTTGACCACT 59.593 45.833 0.00 0.00 0.00 4.00
93 94 4.443598 CCCTCTCCTAATAGCTTTGACCAC 60.444 50.000 0.00 0.00 0.00 4.16
94 95 3.711704 CCCTCTCCTAATAGCTTTGACCA 59.288 47.826 0.00 0.00 0.00 4.02
95 96 3.712218 ACCCTCTCCTAATAGCTTTGACC 59.288 47.826 0.00 0.00 0.00 4.02
96 97 4.162509 ACACCCTCTCCTAATAGCTTTGAC 59.837 45.833 0.00 0.00 0.00 3.18
97 98 4.362677 ACACCCTCTCCTAATAGCTTTGA 58.637 43.478 0.00 0.00 0.00 2.69
98 99 4.762289 ACACCCTCTCCTAATAGCTTTG 57.238 45.455 0.00 0.00 0.00 2.77
99 100 6.615726 TGATTACACCCTCTCCTAATAGCTTT 59.384 38.462 0.00 0.00 0.00 3.51
100 101 6.143915 TGATTACACCCTCTCCTAATAGCTT 58.856 40.000 0.00 0.00 0.00 3.74
101 102 5.716979 TGATTACACCCTCTCCTAATAGCT 58.283 41.667 0.00 0.00 0.00 3.32
102 103 6.014156 ACATGATTACACCCTCTCCTAATAGC 60.014 42.308 0.00 0.00 0.00 2.97
103 104 7.546250 ACATGATTACACCCTCTCCTAATAG 57.454 40.000 0.00 0.00 0.00 1.73
104 105 7.931015 AACATGATTACACCCTCTCCTAATA 57.069 36.000 0.00 0.00 0.00 0.98
105 106 6.831664 AACATGATTACACCCTCTCCTAAT 57.168 37.500 0.00 0.00 0.00 1.73
106 107 6.183360 GCTAACATGATTACACCCTCTCCTAA 60.183 42.308 0.00 0.00 0.00 2.69
107 108 5.304614 GCTAACATGATTACACCCTCTCCTA 59.695 44.000 0.00 0.00 0.00 2.94
108 109 4.101741 GCTAACATGATTACACCCTCTCCT 59.898 45.833 0.00 0.00 0.00 3.69
109 110 4.381411 GCTAACATGATTACACCCTCTCC 58.619 47.826 0.00 0.00 0.00 3.71
110 111 4.141711 TGGCTAACATGATTACACCCTCTC 60.142 45.833 0.00 0.00 0.00 3.20
111 112 3.780294 TGGCTAACATGATTACACCCTCT 59.220 43.478 0.00 0.00 0.00 3.69
112 113 3.877508 GTGGCTAACATGATTACACCCTC 59.122 47.826 0.00 0.00 0.00 4.30
113 114 3.371595 GGTGGCTAACATGATTACACCCT 60.372 47.826 15.41 0.00 40.64 4.34
114 115 2.949644 GGTGGCTAACATGATTACACCC 59.050 50.000 15.41 2.36 40.64 4.61
115 116 3.886123 AGGTGGCTAACATGATTACACC 58.114 45.455 17.32 17.32 45.37 4.16
116 117 5.007724 GCTAAGGTGGCTAACATGATTACAC 59.992 44.000 0.00 1.80 0.00 2.90
117 118 5.104527 AGCTAAGGTGGCTAACATGATTACA 60.105 40.000 0.00 0.00 38.36 2.41
118 119 5.368989 AGCTAAGGTGGCTAACATGATTAC 58.631 41.667 0.00 0.00 38.36 1.89
119 120 5.630415 AGCTAAGGTGGCTAACATGATTA 57.370 39.130 0.00 0.00 38.36 1.75
120 121 4.510167 AGCTAAGGTGGCTAACATGATT 57.490 40.909 0.00 0.00 38.36 2.57
121 122 4.202441 CAAGCTAAGGTGGCTAACATGAT 58.798 43.478 0.00 0.00 39.30 2.45
122 123 3.609853 CAAGCTAAGGTGGCTAACATGA 58.390 45.455 0.00 0.00 39.30 3.07
123 124 2.684881 CCAAGCTAAGGTGGCTAACATG 59.315 50.000 0.00 0.00 39.30 3.21
124 125 2.576191 TCCAAGCTAAGGTGGCTAACAT 59.424 45.455 5.15 0.00 39.30 2.71
125 126 1.982226 TCCAAGCTAAGGTGGCTAACA 59.018 47.619 5.15 0.00 39.30 2.41
126 127 2.781681 TCCAAGCTAAGGTGGCTAAC 57.218 50.000 5.15 0.00 39.30 2.34
127 128 2.158957 CGATCCAAGCTAAGGTGGCTAA 60.159 50.000 5.15 0.00 39.30 3.09
128 129 1.412710 CGATCCAAGCTAAGGTGGCTA 59.587 52.381 5.15 0.00 39.30 3.93
129 130 0.179000 CGATCCAAGCTAAGGTGGCT 59.821 55.000 5.15 0.00 42.31 4.75
130 131 0.815615 CCGATCCAAGCTAAGGTGGC 60.816 60.000 5.15 0.00 34.68 5.01
131 132 0.541863 ACCGATCCAAGCTAAGGTGG 59.458 55.000 5.15 0.42 36.13 4.61
132 133 2.693591 TCTACCGATCCAAGCTAAGGTG 59.306 50.000 5.15 0.00 33.58 4.00
133 134 3.028094 TCTACCGATCCAAGCTAAGGT 57.972 47.619 5.15 3.15 35.91 3.50
134 135 3.322254 ACATCTACCGATCCAAGCTAAGG 59.678 47.826 0.00 0.00 0.00 2.69
135 136 4.038042 TCACATCTACCGATCCAAGCTAAG 59.962 45.833 0.00 0.00 0.00 2.18
136 137 3.958147 TCACATCTACCGATCCAAGCTAA 59.042 43.478 0.00 0.00 0.00 3.09
137 138 3.562182 TCACATCTACCGATCCAAGCTA 58.438 45.455 0.00 0.00 0.00 3.32
138 139 2.363680 CTCACATCTACCGATCCAAGCT 59.636 50.000 0.00 0.00 0.00 3.74
139 140 2.362397 TCTCACATCTACCGATCCAAGC 59.638 50.000 0.00 0.00 0.00 4.01
140 141 4.862902 ATCTCACATCTACCGATCCAAG 57.137 45.455 0.00 0.00 0.00 3.61
141 142 5.243954 CCTTATCTCACATCTACCGATCCAA 59.756 44.000 0.00 0.00 0.00 3.53
142 143 4.767409 CCTTATCTCACATCTACCGATCCA 59.233 45.833 0.00 0.00 0.00 3.41
143 144 5.010933 TCCTTATCTCACATCTACCGATCC 58.989 45.833 0.00 0.00 0.00 3.36
144 145 6.405286 CCATCCTTATCTCACATCTACCGATC 60.405 46.154 0.00 0.00 0.00 3.69
145 146 5.420421 CCATCCTTATCTCACATCTACCGAT 59.580 44.000 0.00 0.00 0.00 4.18
146 147 4.767409 CCATCCTTATCTCACATCTACCGA 59.233 45.833 0.00 0.00 0.00 4.69
147 148 4.619394 GCCATCCTTATCTCACATCTACCG 60.619 50.000 0.00 0.00 0.00 4.02
148 149 4.323104 GGCCATCCTTATCTCACATCTACC 60.323 50.000 0.00 0.00 0.00 3.18
149 150 4.619394 CGGCCATCCTTATCTCACATCTAC 60.619 50.000 2.24 0.00 0.00 2.59
150 151 3.511540 CGGCCATCCTTATCTCACATCTA 59.488 47.826 2.24 0.00 0.00 1.98
151 152 2.301296 CGGCCATCCTTATCTCACATCT 59.699 50.000 2.24 0.00 0.00 2.90
152 153 2.037772 ACGGCCATCCTTATCTCACATC 59.962 50.000 2.24 0.00 0.00 3.06
153 154 2.050144 ACGGCCATCCTTATCTCACAT 58.950 47.619 2.24 0.00 0.00 3.21
154 155 1.496060 ACGGCCATCCTTATCTCACA 58.504 50.000 2.24 0.00 0.00 3.58
155 156 3.589988 CATACGGCCATCCTTATCTCAC 58.410 50.000 2.24 0.00 0.00 3.51
156 157 2.567169 CCATACGGCCATCCTTATCTCA 59.433 50.000 2.24 0.00 0.00 3.27
157 158 2.567615 ACCATACGGCCATCCTTATCTC 59.432 50.000 2.24 0.00 34.57 2.75
158 159 2.621070 ACCATACGGCCATCCTTATCT 58.379 47.619 2.24 0.00 34.57 1.98
159 160 3.418684 AACCATACGGCCATCCTTATC 57.581 47.619 2.24 0.00 34.57 1.75
160 161 4.281898 GTAACCATACGGCCATCCTTAT 57.718 45.455 2.24 0.00 34.57 1.73
161 162 3.756933 GTAACCATACGGCCATCCTTA 57.243 47.619 2.24 0.00 34.57 2.69
162 163 2.632987 GTAACCATACGGCCATCCTT 57.367 50.000 2.24 0.00 34.57 3.36
172 173 0.807275 GTGCCCGACCGTAACCATAC 60.807 60.000 0.00 0.00 0.00 2.39
173 174 0.971959 AGTGCCCGACCGTAACCATA 60.972 55.000 0.00 0.00 0.00 2.74
174 175 0.971959 TAGTGCCCGACCGTAACCAT 60.972 55.000 0.00 0.00 0.00 3.55
175 176 1.184322 TTAGTGCCCGACCGTAACCA 61.184 55.000 0.00 0.00 0.00 3.67
176 177 0.459063 CTTAGTGCCCGACCGTAACC 60.459 60.000 0.00 0.00 0.00 2.85
177 178 0.527565 TCTTAGTGCCCGACCGTAAC 59.472 55.000 0.00 0.00 0.00 2.50
178 179 0.813184 CTCTTAGTGCCCGACCGTAA 59.187 55.000 0.00 0.00 0.00 3.18
179 180 1.033746 CCTCTTAGTGCCCGACCGTA 61.034 60.000 0.00 0.00 0.00 4.02
180 181 2.348888 CCTCTTAGTGCCCGACCGT 61.349 63.158 0.00 0.00 0.00 4.83
181 182 2.494918 CCTCTTAGTGCCCGACCG 59.505 66.667 0.00 0.00 0.00 4.79
182 183 1.551019 AACCCTCTTAGTGCCCGACC 61.551 60.000 0.00 0.00 0.00 4.79
183 184 0.391263 CAACCCTCTTAGTGCCCGAC 60.391 60.000 0.00 0.00 0.00 4.79
184 185 0.834687 ACAACCCTCTTAGTGCCCGA 60.835 55.000 0.00 0.00 0.00 5.14
185 186 0.899720 TACAACCCTCTTAGTGCCCG 59.100 55.000 0.00 0.00 0.00 6.13
186 187 3.079578 GTTTACAACCCTCTTAGTGCCC 58.920 50.000 0.00 0.00 0.00 5.36
187 188 4.017177 AGTTTACAACCCTCTTAGTGCC 57.983 45.455 0.00 0.00 0.00 5.01
188 189 4.820173 ACAAGTTTACAACCCTCTTAGTGC 59.180 41.667 0.00 0.00 0.00 4.40
189 190 5.820947 ACACAAGTTTACAACCCTCTTAGTG 59.179 40.000 0.00 0.00 0.00 2.74
190 191 5.820947 CACACAAGTTTACAACCCTCTTAGT 59.179 40.000 0.00 0.00 0.00 2.24
191 192 6.053005 TCACACAAGTTTACAACCCTCTTAG 58.947 40.000 0.00 0.00 0.00 2.18
192 193 5.991861 TCACACAAGTTTACAACCCTCTTA 58.008 37.500 0.00 0.00 0.00 2.10
193 194 4.850680 TCACACAAGTTTACAACCCTCTT 58.149 39.130 0.00 0.00 0.00 2.85
194 195 4.497291 TCACACAAGTTTACAACCCTCT 57.503 40.909 0.00 0.00 0.00 3.69
195 196 4.638865 AGTTCACACAAGTTTACAACCCTC 59.361 41.667 0.00 0.00 0.00 4.30
196 197 4.398044 CAGTTCACACAAGTTTACAACCCT 59.602 41.667 0.00 0.00 0.00 4.34
197 198 4.439563 CCAGTTCACACAAGTTTACAACCC 60.440 45.833 0.00 0.00 0.00 4.11
198 199 4.396790 TCCAGTTCACACAAGTTTACAACC 59.603 41.667 0.00 0.00 0.00 3.77
199 200 5.123344 AGTCCAGTTCACACAAGTTTACAAC 59.877 40.000 0.00 0.00 0.00 3.32
200 201 5.123186 CAGTCCAGTTCACACAAGTTTACAA 59.877 40.000 0.00 0.00 0.00 2.41
201 202 4.634004 CAGTCCAGTTCACACAAGTTTACA 59.366 41.667 0.00 0.00 0.00 2.41
202 203 4.634443 ACAGTCCAGTTCACACAAGTTTAC 59.366 41.667 0.00 0.00 0.00 2.01
203 204 4.839121 ACAGTCCAGTTCACACAAGTTTA 58.161 39.130 0.00 0.00 0.00 2.01
204 205 3.686016 ACAGTCCAGTTCACACAAGTTT 58.314 40.909 0.00 0.00 0.00 2.66
205 206 3.350219 ACAGTCCAGTTCACACAAGTT 57.650 42.857 0.00 0.00 0.00 2.66
206 207 4.189231 GTTACAGTCCAGTTCACACAAGT 58.811 43.478 0.00 0.00 0.00 3.16
207 208 3.245284 CGTTACAGTCCAGTTCACACAAG 59.755 47.826 0.00 0.00 0.00 3.16
208 209 3.191669 CGTTACAGTCCAGTTCACACAA 58.808 45.455 0.00 0.00 0.00 3.33
209 210 2.166870 ACGTTACAGTCCAGTTCACACA 59.833 45.455 0.00 0.00 0.00 3.72
210 211 2.817901 ACGTTACAGTCCAGTTCACAC 58.182 47.619 0.00 0.00 0.00 3.82
211 212 3.450578 GAACGTTACAGTCCAGTTCACA 58.549 45.455 0.00 0.00 40.41 3.58
212 213 2.798847 GGAACGTTACAGTCCAGTTCAC 59.201 50.000 5.39 0.00 41.91 3.18
213 214 2.431419 TGGAACGTTACAGTCCAGTTCA 59.569 45.455 9.75 0.00 41.91 3.18
214 215 3.057734 CTGGAACGTTACAGTCCAGTTC 58.942 50.000 29.00 0.00 42.06 3.01
215 216 2.224209 CCTGGAACGTTACAGTCCAGTT 60.224 50.000 33.00 0.00 44.64 3.16
216 217 1.343465 CCTGGAACGTTACAGTCCAGT 59.657 52.381 33.00 0.00 44.64 4.00
217 218 1.343465 ACCTGGAACGTTACAGTCCAG 59.657 52.381 33.00 27.06 45.43 3.86
218 219 1.416243 ACCTGGAACGTTACAGTCCA 58.584 50.000 33.00 20.39 37.43 4.02
219 220 2.538512 AACCTGGAACGTTACAGTCC 57.461 50.000 33.00 16.93 37.43 3.85
220 221 7.656707 TTAATTAACCTGGAACGTTACAGTC 57.343 36.000 33.00 7.70 37.43 3.51
221 222 9.895138 ATATTAATTAACCTGGAACGTTACAGT 57.105 29.630 33.00 21.17 37.43 3.55
227 228 9.551734 GGTTCTATATTAATTAACCTGGAACGT 57.448 33.333 20.11 0.00 37.27 3.99
228 229 8.996271 GGGTTCTATATTAATTAACCTGGAACG 58.004 37.037 20.11 0.00 39.62 3.95
237 238 9.886337 GGGGGAAAAGGGTTCTATATTAATTAA 57.114 33.333 0.00 0.00 0.00 1.40
238 239 8.165397 CGGGGGAAAAGGGTTCTATATTAATTA 58.835 37.037 0.00 0.00 0.00 1.40
239 240 7.008332 CGGGGGAAAAGGGTTCTATATTAATT 58.992 38.462 0.00 0.00 0.00 1.40
240 241 6.549242 CGGGGGAAAAGGGTTCTATATTAAT 58.451 40.000 0.00 0.00 0.00 1.40
241 242 5.690899 GCGGGGGAAAAGGGTTCTATATTAA 60.691 44.000 0.00 0.00 0.00 1.40
242 243 4.202493 GCGGGGGAAAAGGGTTCTATATTA 60.202 45.833 0.00 0.00 0.00 0.98
243 244 3.436035 GCGGGGGAAAAGGGTTCTATATT 60.436 47.826 0.00 0.00 0.00 1.28
244 245 2.107726 GCGGGGGAAAAGGGTTCTATAT 59.892 50.000 0.00 0.00 0.00 0.86
245 246 1.491754 GCGGGGGAAAAGGGTTCTATA 59.508 52.381 0.00 0.00 0.00 1.31
246 247 0.257905 GCGGGGGAAAAGGGTTCTAT 59.742 55.000 0.00 0.00 0.00 1.98
247 248 1.135068 TGCGGGGGAAAAGGGTTCTA 61.135 55.000 0.00 0.00 0.00 2.10
248 249 2.014033 TTGCGGGGGAAAAGGGTTCT 62.014 55.000 0.00 0.00 0.00 3.01
249 250 1.116536 TTTGCGGGGGAAAAGGGTTC 61.117 55.000 0.00 0.00 0.00 3.62
250 251 0.472925 ATTTGCGGGGGAAAAGGGTT 60.473 50.000 0.00 0.00 0.00 4.11
251 252 0.410270 TATTTGCGGGGGAAAAGGGT 59.590 50.000 0.00 0.00 0.00 4.34
252 253 1.562783 TTATTTGCGGGGGAAAAGGG 58.437 50.000 0.00 0.00 0.00 3.95
253 254 3.686916 TTTTATTTGCGGGGGAAAAGG 57.313 42.857 0.00 0.00 0.00 3.11
271 272 0.958876 GGATCGTCGCCCAGGTTTTT 60.959 55.000 0.00 0.00 0.00 1.94
272 273 1.376812 GGATCGTCGCCCAGGTTTT 60.377 57.895 0.00 0.00 0.00 2.43
273 274 2.267961 GGATCGTCGCCCAGGTTT 59.732 61.111 0.00 0.00 0.00 3.27
274 275 3.782443 GGGATCGTCGCCCAGGTT 61.782 66.667 3.26 0.00 45.31 3.50
279 280 3.607661 GGAGAGGGATCGTCGCCC 61.608 72.222 5.46 0.00 46.40 6.13
280 281 1.749334 AATGGAGAGGGATCGTCGCC 61.749 60.000 8.91 8.91 38.38 5.54
281 282 0.105039 AAATGGAGAGGGATCGTCGC 59.895 55.000 0.00 0.00 0.00 5.19
282 283 1.539065 CCAAATGGAGAGGGATCGTCG 60.539 57.143 0.00 0.00 37.39 5.12
283 284 1.202698 CCCAAATGGAGAGGGATCGTC 60.203 57.143 0.00 0.00 45.80 4.20
284 285 0.839946 CCCAAATGGAGAGGGATCGT 59.160 55.000 0.00 0.00 45.80 3.73
285 286 0.839946 ACCCAAATGGAGAGGGATCG 59.160 55.000 3.32 0.00 45.80 3.69
286 287 3.318313 TCTACCCAAATGGAGAGGGATC 58.682 50.000 3.32 0.00 45.80 3.36
287 288 3.438131 TCTACCCAAATGGAGAGGGAT 57.562 47.619 3.32 0.00 45.80 3.85
288 289 2.844348 GTTCTACCCAAATGGAGAGGGA 59.156 50.000 3.32 0.00 45.80 4.20
290 291 4.202441 CATGTTCTACCCAAATGGAGAGG 58.798 47.826 0.00 0.00 37.39 3.69
291 292 3.629398 GCATGTTCTACCCAAATGGAGAG 59.371 47.826 0.00 0.00 37.39 3.20
292 293 3.266772 AGCATGTTCTACCCAAATGGAGA 59.733 43.478 0.00 0.00 37.39 3.71
293 294 3.624777 AGCATGTTCTACCCAAATGGAG 58.375 45.455 0.00 0.00 37.39 3.86
294 295 3.737559 AGCATGTTCTACCCAAATGGA 57.262 42.857 0.00 0.00 37.39 3.41
295 296 4.339247 CCTAAGCATGTTCTACCCAAATGG 59.661 45.833 0.00 0.00 41.37 3.16
296 297 4.949856 ACCTAAGCATGTTCTACCCAAATG 59.050 41.667 0.00 0.00 0.00 2.32
297 298 5.193099 ACCTAAGCATGTTCTACCCAAAT 57.807 39.130 0.00 0.00 0.00 2.32
298 299 4.650972 ACCTAAGCATGTTCTACCCAAA 57.349 40.909 0.00 0.00 0.00 3.28
299 300 4.781087 AGTACCTAAGCATGTTCTACCCAA 59.219 41.667 0.00 0.00 0.00 4.12
300 301 4.359105 AGTACCTAAGCATGTTCTACCCA 58.641 43.478 0.00 0.00 0.00 4.51
301 302 4.202233 GGAGTACCTAAGCATGTTCTACCC 60.202 50.000 0.00 0.00 0.00 3.69
302 303 4.202233 GGGAGTACCTAAGCATGTTCTACC 60.202 50.000 0.00 0.00 35.85 3.18
303 304 4.404715 TGGGAGTACCTAAGCATGTTCTAC 59.595 45.833 0.00 0.00 41.11 2.59
304 305 4.616553 TGGGAGTACCTAAGCATGTTCTA 58.383 43.478 0.00 0.00 41.11 2.10
305 306 3.450904 TGGGAGTACCTAAGCATGTTCT 58.549 45.455 0.00 0.00 41.11 3.01
306 307 3.451178 TCTGGGAGTACCTAAGCATGTTC 59.549 47.826 0.00 0.00 41.11 3.18
307 308 3.450904 TCTGGGAGTACCTAAGCATGTT 58.549 45.455 0.00 0.00 41.11 2.71
308 309 3.116096 TCTGGGAGTACCTAAGCATGT 57.884 47.619 0.00 0.00 41.11 3.21
309 310 4.221703 CCTATCTGGGAGTACCTAAGCATG 59.778 50.000 0.00 0.00 41.11 4.06
310 311 4.421131 CCTATCTGGGAGTACCTAAGCAT 58.579 47.826 0.00 0.00 41.11 3.79
311 312 3.845860 CCTATCTGGGAGTACCTAAGCA 58.154 50.000 0.00 0.00 41.11 3.91
312 313 2.563620 GCCTATCTGGGAGTACCTAAGC 59.436 54.545 0.00 0.00 41.11 3.09
313 314 4.120946 AGCCTATCTGGGAGTACCTAAG 57.879 50.000 0.00 0.00 41.11 2.18
314 315 4.668812 AGTAGCCTATCTGGGAGTACCTAA 59.331 45.833 0.00 0.00 41.11 2.69
315 316 4.249490 AGTAGCCTATCTGGGAGTACCTA 58.751 47.826 0.00 0.00 41.11 3.08
316 317 3.065175 AGTAGCCTATCTGGGAGTACCT 58.935 50.000 0.00 0.00 41.11 3.08
317 318 3.529216 AGTAGCCTATCTGGGAGTACC 57.471 52.381 0.00 0.00 40.81 3.34
318 319 4.216708 ACAAGTAGCCTATCTGGGAGTAC 58.783 47.826 0.00 0.00 36.00 2.73
319 320 4.537945 ACAAGTAGCCTATCTGGGAGTA 57.462 45.455 0.00 0.00 36.00 2.59
320 321 3.406512 ACAAGTAGCCTATCTGGGAGT 57.593 47.619 0.00 0.00 36.00 3.85
321 322 3.452627 ACAACAAGTAGCCTATCTGGGAG 59.547 47.826 0.00 0.00 36.00 4.30
322 323 3.197766 CACAACAAGTAGCCTATCTGGGA 59.802 47.826 0.00 0.00 36.00 4.37
323 324 3.535561 CACAACAAGTAGCCTATCTGGG 58.464 50.000 0.00 0.00 36.00 4.45
324 325 2.939103 GCACAACAAGTAGCCTATCTGG 59.061 50.000 0.00 0.00 39.35 3.86
325 326 3.620374 CAGCACAACAAGTAGCCTATCTG 59.380 47.826 0.00 0.00 0.00 2.90
326 327 3.515502 TCAGCACAACAAGTAGCCTATCT 59.484 43.478 0.00 0.00 0.00 1.98
327 328 3.619038 GTCAGCACAACAAGTAGCCTATC 59.381 47.826 0.00 0.00 0.00 2.08
328 329 3.007940 TGTCAGCACAACAAGTAGCCTAT 59.992 43.478 0.00 0.00 0.00 2.57
329 330 2.367241 TGTCAGCACAACAAGTAGCCTA 59.633 45.455 0.00 0.00 0.00 3.93
330 331 1.140852 TGTCAGCACAACAAGTAGCCT 59.859 47.619 0.00 0.00 0.00 4.58
331 332 1.593196 TGTCAGCACAACAAGTAGCC 58.407 50.000 0.00 0.00 0.00 3.93
332 333 2.549754 ACATGTCAGCACAACAAGTAGC 59.450 45.455 0.00 0.00 35.64 3.58
333 334 3.058708 CCACATGTCAGCACAACAAGTAG 60.059 47.826 0.00 0.00 35.64 2.57
334 335 2.877786 CCACATGTCAGCACAACAAGTA 59.122 45.455 0.00 0.00 35.64 2.24
335 336 1.677576 CCACATGTCAGCACAACAAGT 59.322 47.619 0.00 0.00 35.64 3.16
336 337 1.948834 TCCACATGTCAGCACAACAAG 59.051 47.619 0.00 0.00 35.64 3.16
337 338 1.675483 GTCCACATGTCAGCACAACAA 59.325 47.619 0.00 0.00 35.64 2.83
338 339 1.308047 GTCCACATGTCAGCACAACA 58.692 50.000 0.00 0.00 35.64 3.33
339 340 0.593128 GGTCCACATGTCAGCACAAC 59.407 55.000 0.00 0.00 35.64 3.32
340 341 0.537143 GGGTCCACATGTCAGCACAA 60.537 55.000 0.00 0.00 35.64 3.33
341 342 1.073025 GGGTCCACATGTCAGCACA 59.927 57.895 0.00 0.00 36.78 4.57
342 343 0.537143 TTGGGTCCACATGTCAGCAC 60.537 55.000 0.00 0.00 0.00 4.40
343 344 0.184692 TTTGGGTCCACATGTCAGCA 59.815 50.000 0.00 0.00 0.00 4.41
344 345 0.598065 GTTTGGGTCCACATGTCAGC 59.402 55.000 0.00 0.00 0.00 4.26
345 346 1.881973 CAGTTTGGGTCCACATGTCAG 59.118 52.381 0.00 0.00 0.00 3.51
346 347 1.478471 CCAGTTTGGGTCCACATGTCA 60.478 52.381 0.00 0.00 32.67 3.58
347 348 1.202879 TCCAGTTTGGGTCCACATGTC 60.203 52.381 0.00 0.00 38.32 3.06
348 349 0.850100 TCCAGTTTGGGTCCACATGT 59.150 50.000 0.00 0.00 38.32 3.21
349 350 1.993956 TTCCAGTTTGGGTCCACATG 58.006 50.000 0.00 0.00 38.32 3.21
350 351 2.765689 TTTCCAGTTTGGGTCCACAT 57.234 45.000 0.00 0.00 38.32 3.21
351 352 2.534042 TTTTCCAGTTTGGGTCCACA 57.466 45.000 0.00 0.00 38.32 4.17
352 353 3.028130 TCTTTTTCCAGTTTGGGTCCAC 58.972 45.455 0.00 0.00 38.32 4.02
353 354 3.295973 CTCTTTTTCCAGTTTGGGTCCA 58.704 45.455 0.00 0.00 38.32 4.02
354 355 3.296854 ACTCTTTTTCCAGTTTGGGTCC 58.703 45.455 0.00 0.00 38.32 4.46
355 356 5.374071 TCTACTCTTTTTCCAGTTTGGGTC 58.626 41.667 0.00 0.00 38.32 4.46
356 357 5.132144 TCTCTACTCTTTTTCCAGTTTGGGT 59.868 40.000 0.00 0.00 38.32 4.51
357 358 5.621193 TCTCTACTCTTTTTCCAGTTTGGG 58.379 41.667 0.00 0.00 38.32 4.12
358 359 7.568199 TTTCTCTACTCTTTTTCCAGTTTGG 57.432 36.000 0.00 0.00 39.43 3.28
384 385 9.286170 GTCTCTTAGACAAAGTTCCCTATTTTT 57.714 33.333 2.22 0.00 44.45 1.94
385 386 8.850007 GTCTCTTAGACAAAGTTCCCTATTTT 57.150 34.615 2.22 0.00 44.45 1.82
439 440 9.927668 CCCTGTATTCACATAATTTTTGTTCTT 57.072 29.630 0.00 0.00 33.14 2.52
440 441 9.308000 TCCCTGTATTCACATAATTTTTGTTCT 57.692 29.630 0.00 0.00 33.14 3.01
441 442 9.921637 TTCCCTGTATTCACATAATTTTTGTTC 57.078 29.630 0.00 0.00 33.14 3.18
449 450 8.877864 TTGTCTTTTCCCTGTATTCACATAAT 57.122 30.769 0.00 0.00 33.14 1.28
450 451 7.393234 CCTTGTCTTTTCCCTGTATTCACATAA 59.607 37.037 0.00 0.00 33.14 1.90
461 462 2.675658 TTCCCCTTGTCTTTTCCCTG 57.324 50.000 0.00 0.00 0.00 4.45
492 493 5.220381 GTGTACTCATCTCAACAGACGAAA 58.780 41.667 0.00 0.00 0.00 3.46
493 494 4.321008 GGTGTACTCATCTCAACAGACGAA 60.321 45.833 0.00 0.00 0.00 3.85
505 506 1.550524 TGACTGCAGGGTGTACTCATC 59.449 52.381 19.93 2.57 0.00 2.92
509 510 1.352083 ACATGACTGCAGGGTGTACT 58.648 50.000 19.93 0.00 0.00 2.73
519 520 6.672147 ACTCAACTTAATCAAACATGACTGC 58.328 36.000 0.00 0.00 0.00 4.40
546 563 8.978874 ATACATCACTGGCATAAACATCTTAA 57.021 30.769 0.00 0.00 0.00 1.85
547 564 8.978874 AATACATCACTGGCATAAACATCTTA 57.021 30.769 0.00 0.00 0.00 2.10
548 565 7.886629 AATACATCACTGGCATAAACATCTT 57.113 32.000 0.00 0.00 0.00 2.40
549 566 7.445402 GGTAATACATCACTGGCATAAACATCT 59.555 37.037 0.00 0.00 0.00 2.90
554 571 6.658849 ACTGGTAATACATCACTGGCATAAA 58.341 36.000 0.00 0.00 0.00 1.40
670 698 3.702045 AGATGAGACCTACCAGTAGTTGC 59.298 47.826 4.23 0.00 0.00 4.17
768 796 1.269448 GCGCTCAATCACCCTTCAAAA 59.731 47.619 0.00 0.00 0.00 2.44
777 805 2.444351 GCAACTTATGCGCTCAATCAC 58.556 47.619 9.73 0.00 46.87 3.06
789 817 5.065914 ACTCATGTGTGAACTGCAACTTAT 58.934 37.500 0.00 0.00 33.05 1.73
790 818 4.450976 ACTCATGTGTGAACTGCAACTTA 58.549 39.130 0.00 0.00 33.05 2.24
791 819 3.282021 ACTCATGTGTGAACTGCAACTT 58.718 40.909 0.00 0.00 33.05 2.66
794 822 2.223548 GCAACTCATGTGTGAACTGCAA 60.224 45.455 14.35 0.00 39.78 4.08
796 824 1.605710 AGCAACTCATGTGTGAACTGC 59.394 47.619 12.26 12.26 40.08 4.40
797 825 3.976793 AAGCAACTCATGTGTGAACTG 57.023 42.857 0.31 0.00 33.05 3.16
842 874 4.331168 GTGCATACATCTCAACAGAAGACC 59.669 45.833 0.00 0.00 30.24 3.85
935 1905 4.704103 AGGGTCTGGGCTCGAGCA 62.704 66.667 36.27 18.05 44.36 4.26
944 1914 6.579865 ACTTATAATGTCGTAAAGGGTCTGG 58.420 40.000 0.00 0.00 0.00 3.86
951 1921 9.731819 TTCTGAGCTACTTATAATGTCGTAAAG 57.268 33.333 0.00 0.00 0.00 1.85
953 1923 9.512435 GTTTCTGAGCTACTTATAATGTCGTAA 57.488 33.333 0.00 0.00 0.00 3.18
954 1924 8.900781 AGTTTCTGAGCTACTTATAATGTCGTA 58.099 33.333 0.00 0.00 0.00 3.43
955 1925 7.773149 AGTTTCTGAGCTACTTATAATGTCGT 58.227 34.615 0.00 0.00 0.00 4.34
956 1926 8.535592 CAAGTTTCTGAGCTACTTATAATGTCG 58.464 37.037 0.00 0.00 31.30 4.35
957 1927 9.587772 TCAAGTTTCTGAGCTACTTATAATGTC 57.412 33.333 0.00 0.00 31.30 3.06
958 1928 9.593134 CTCAAGTTTCTGAGCTACTTATAATGT 57.407 33.333 0.00 0.00 36.67 2.71
975 1947 4.529109 ACAGTAGAGAGGCTCAAGTTTC 57.471 45.455 18.26 4.87 32.06 2.78
983 1955 2.781174 AGTAGGCTACAGTAGAGAGGCT 59.219 50.000 25.48 7.06 46.72 4.58
986 1958 4.504340 GGAGGAGTAGGCTACAGTAGAGAG 60.504 54.167 25.48 0.00 0.00 3.20
990 1962 2.104451 TCGGAGGAGTAGGCTACAGTAG 59.896 54.545 25.48 11.81 0.00 2.57
995 1967 2.377073 AGTTTCGGAGGAGTAGGCTAC 58.623 52.381 16.93 16.93 0.00 3.58
998 1970 1.067364 GCTAGTTTCGGAGGAGTAGGC 59.933 57.143 0.00 0.00 0.00 3.93
1016 1990 1.954362 CTTGCTGCGTCCTAGAGGCT 61.954 60.000 10.26 0.00 42.87 4.58
1017 1991 1.520342 CTTGCTGCGTCCTAGAGGC 60.520 63.158 2.45 2.45 42.76 4.70
1018 1992 0.749649 ATCTTGCTGCGTCCTAGAGG 59.250 55.000 0.00 0.00 0.00 3.69
1019 1993 2.606795 GCTATCTTGCTGCGTCCTAGAG 60.607 54.545 0.00 0.00 0.00 2.43
1023 1997 1.144936 GGCTATCTTGCTGCGTCCT 59.855 57.895 0.00 0.00 0.00 3.85
1036 2010 1.228228 CCATGGCTGGTGTGGCTAT 59.772 57.895 0.00 0.00 37.79 2.97
1256 2236 2.102394 GACGGAGATGTCGATCGCGA 62.102 60.000 13.09 13.09 45.71 5.87
1344 2327 2.049433 CGGAAGAACCTGTCGCGT 60.049 61.111 5.77 0.00 36.31 6.01
1698 2693 2.997897 ACCTCGCCGAAGCTCCTT 60.998 61.111 0.00 0.00 36.60 3.36
1816 2811 2.751436 CCCGGCCATGTTGTCCTG 60.751 66.667 2.24 0.00 0.00 3.86
1991 2986 1.202177 CCATCGCCCACAGAAAATTCG 60.202 52.381 0.00 0.00 0.00 3.34
2231 3234 1.483004 TCTCGTTGTTGAACTGGTCCA 59.517 47.619 0.00 0.00 0.00 4.02
2397 3415 4.379243 ACAGCGAGGTCCTTGGCG 62.379 66.667 8.30 1.09 0.00 5.69
2467 3485 0.037326 GTCAACTCGTCCATCAGCCA 60.037 55.000 0.00 0.00 0.00 4.75
2499 3517 4.219033 CAGCTTGTTTAACATTGACGGAC 58.781 43.478 0.00 0.00 0.00 4.79
2508 3530 2.483877 CGATCAGCCAGCTTGTTTAACA 59.516 45.455 0.00 0.00 0.00 2.41
2537 3559 2.356135 ACGAGCCATGTGGTCAATAAC 58.644 47.619 12.02 0.00 41.69 1.89
2538 3560 2.779755 ACGAGCCATGTGGTCAATAA 57.220 45.000 12.02 0.00 41.69 1.40
2539 3561 2.779755 AACGAGCCATGTGGTCAATA 57.220 45.000 12.02 0.00 41.69 1.90
2540 3562 1.812571 GAAACGAGCCATGTGGTCAAT 59.187 47.619 12.02 0.03 41.69 2.57
2541 3563 1.234821 GAAACGAGCCATGTGGTCAA 58.765 50.000 12.02 0.00 41.69 3.18
2542 3564 0.107643 TGAAACGAGCCATGTGGTCA 59.892 50.000 12.02 0.00 41.69 4.02
2543 3565 0.517316 GTGAAACGAGCCATGTGGTC 59.483 55.000 0.35 0.00 37.57 4.02
2544 3566 0.108585 AGTGAAACGAGCCATGTGGT 59.891 50.000 0.35 0.00 45.86 4.16
2545 3567 1.238439 AAGTGAAACGAGCCATGTGG 58.762 50.000 0.00 0.00 45.86 4.17
2546 3568 3.003689 AGAAAAGTGAAACGAGCCATGTG 59.996 43.478 0.00 0.00 45.86 3.21
2547 3569 3.003689 CAGAAAAGTGAAACGAGCCATGT 59.996 43.478 0.00 0.00 45.86 3.21
2575 3597 7.123547 TGTGCTCCCTCTAAAGAAAAAGAAAAA 59.876 33.333 0.00 0.00 0.00 1.94
2576 3598 6.605594 TGTGCTCCCTCTAAAGAAAAAGAAAA 59.394 34.615 0.00 0.00 0.00 2.29
2577 3599 6.126409 TGTGCTCCCTCTAAAGAAAAAGAAA 58.874 36.000 0.00 0.00 0.00 2.52
2578 3600 5.690865 TGTGCTCCCTCTAAAGAAAAAGAA 58.309 37.500 0.00 0.00 0.00 2.52
2579 3601 5.304686 TGTGCTCCCTCTAAAGAAAAAGA 57.695 39.130 0.00 0.00 0.00 2.52
2580 3602 5.707298 TCATGTGCTCCCTCTAAAGAAAAAG 59.293 40.000 0.00 0.00 0.00 2.27
2581 3603 5.630121 TCATGTGCTCCCTCTAAAGAAAAA 58.370 37.500 0.00 0.00 0.00 1.94
2582 3604 5.221925 ACTCATGTGCTCCCTCTAAAGAAAA 60.222 40.000 0.00 0.00 0.00 2.29
2583 3605 4.287067 ACTCATGTGCTCCCTCTAAAGAAA 59.713 41.667 0.00 0.00 0.00 2.52
2584 3606 3.840666 ACTCATGTGCTCCCTCTAAAGAA 59.159 43.478 0.00 0.00 0.00 2.52
2585 3607 3.445008 ACTCATGTGCTCCCTCTAAAGA 58.555 45.455 0.00 0.00 0.00 2.52
2586 3608 3.902881 ACTCATGTGCTCCCTCTAAAG 57.097 47.619 0.00 0.00 0.00 1.85
2587 3609 3.307691 CCAACTCATGTGCTCCCTCTAAA 60.308 47.826 0.00 0.00 0.00 1.85
2588 3610 2.237143 CCAACTCATGTGCTCCCTCTAA 59.763 50.000 0.00 0.00 0.00 2.10
2589 3611 1.833630 CCAACTCATGTGCTCCCTCTA 59.166 52.381 0.00 0.00 0.00 2.43
2590 3612 0.617413 CCAACTCATGTGCTCCCTCT 59.383 55.000 0.00 0.00 0.00 3.69
2591 3613 1.028868 GCCAACTCATGTGCTCCCTC 61.029 60.000 0.00 0.00 0.00 4.30
2592 3614 1.001641 GCCAACTCATGTGCTCCCT 60.002 57.895 0.00 0.00 0.00 4.20
2646 3668 9.606631 TGGCAAATCACTTTTAAACTTTACAAT 57.393 25.926 0.00 0.00 0.00 2.71
2656 3678 7.817418 ACTACTTCTGGCAAATCACTTTTAA 57.183 32.000 0.00 0.00 0.00 1.52
2657 3679 7.500892 TCAACTACTTCTGGCAAATCACTTTTA 59.499 33.333 0.00 0.00 0.00 1.52
3338 4386 9.533253 CAAAGTCTTTACCAAATTCAACATTCT 57.467 29.630 0.00 0.00 0.00 2.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.