Multiple sequence alignment - TraesCS4A01G444500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G444500 chr4A 100.000 3741 0 0 1 3741 712914290 712918030 0.000000e+00 6909.0
1 TraesCS4A01G444500 chr4A 90.836 1866 141 15 1309 3165 712954951 712956795 0.000000e+00 2471.0
2 TraesCS4A01G444500 chr4A 93.137 510 32 1 754 1263 712954435 712954941 0.000000e+00 745.0
3 TraesCS4A01G444500 chr4A 81.619 593 73 19 57 638 712953340 712953907 3.410000e-125 459.0
4 TraesCS4A01G444500 chr4A 94.382 267 14 1 266 532 611288243 611288508 3.480000e-110 409.0
5 TraesCS4A01G444500 chr4A 81.081 481 52 17 233 705 712953904 712954353 7.690000e-92 348.0
6 TraesCS4A01G444500 chr4A 80.508 118 20 3 3624 3740 75946944 75947059 1.850000e-13 87.9
7 TraesCS4A01G444500 chr7D 90.100 1596 122 13 1479 3070 20239058 20240621 0.000000e+00 2039.0
8 TraesCS4A01G444500 chr7D 92.588 742 48 5 738 1478 20238239 20238974 0.000000e+00 1059.0
9 TraesCS4A01G444500 chr7D 84.551 712 60 25 1 705 20237491 20238159 0.000000e+00 660.0
10 TraesCS4A01G444500 chr7D 91.262 103 9 0 3063 3165 20246852 20246954 1.400000e-29 141.0
11 TraesCS4A01G444500 chr7A 90.257 1129 78 14 1479 2600 20293354 20294457 0.000000e+00 1447.0
12 TraesCS4A01G444500 chr7A 90.374 748 60 6 740 1478 20292526 20293270 0.000000e+00 972.0
13 TraesCS4A01G444500 chr7A 82.436 706 75 32 2 702 20291780 20292441 4.190000e-159 571.0
14 TraesCS4A01G444500 chr7A 82.319 526 49 12 2648 3132 20294457 20294979 2.080000e-112 416.0
15 TraesCS4A01G444500 chr7A 93.796 274 15 2 260 532 199440837 199440565 9.670000e-111 411.0
16 TraesCS4A01G444500 chr2A 91.379 522 32 7 17 532 269307586 269307072 0.000000e+00 702.0
17 TraesCS4A01G444500 chr2A 90.805 522 35 7 17 532 269269812 269269298 0.000000e+00 686.0
18 TraesCS4A01G444500 chr2A 84.337 83 7 3 2150 2227 726586973 726586892 4.010000e-10 76.8
19 TraesCS4A01G444500 chr3A 91.188 522 36 5 17 532 689756020 689755503 0.000000e+00 701.0
20 TraesCS4A01G444500 chr3A 80.000 155 30 1 3586 3740 277491031 277491184 3.050000e-21 113.0
21 TraesCS4A01G444500 chr2D 81.459 658 72 21 1 643 140190839 140190217 9.330000e-136 494.0
22 TraesCS4A01G444500 chrUn 94.382 267 14 1 266 532 295945215 295944950 3.480000e-110 409.0
23 TraesCS4A01G444500 chr1B 79.888 179 19 11 2153 2323 143638185 143638354 8.490000e-22 115.0
24 TraesCS4A01G444500 chr5B 80.503 159 22 9 3587 3741 697457122 697457275 3.050000e-21 113.0
25 TraesCS4A01G444500 chr5B 82.353 85 7 2 2151 2227 81178346 81178430 2.410000e-07 67.6
26 TraesCS4A01G444500 chr6A 84.337 83 7 4 2150 2227 391866935 391866854 4.010000e-10 76.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G444500 chr4A 712914290 712918030 3740 False 6909.000000 6909 100.000000 1 3741 1 chr4A.!!$F3 3740
1 TraesCS4A01G444500 chr4A 712953340 712956795 3455 False 1005.750000 2471 86.668250 57 3165 4 chr4A.!!$F4 3108
2 TraesCS4A01G444500 chr7D 20237491 20240621 3130 False 1252.666667 2039 89.079667 1 3070 3 chr7D.!!$F2 3069
3 TraesCS4A01G444500 chr7A 20291780 20294979 3199 False 851.500000 1447 86.346500 2 3132 4 chr7A.!!$F1 3130
4 TraesCS4A01G444500 chr2A 269307072 269307586 514 True 702.000000 702 91.379000 17 532 1 chr2A.!!$R2 515
5 TraesCS4A01G444500 chr2A 269269298 269269812 514 True 686.000000 686 90.805000 17 532 1 chr2A.!!$R1 515
6 TraesCS4A01G444500 chr3A 689755503 689756020 517 True 701.000000 701 91.188000 17 532 1 chr3A.!!$R1 515
7 TraesCS4A01G444500 chr2D 140190217 140190839 622 True 494.000000 494 81.459000 1 643 1 chr2D.!!$R1 642

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
676 1118 2.005370 GGGGGCATCATCATGTGAAT 57.995 50.0 0.00 0.0 40.97 2.57 F
1546 2144 0.322277 CTGGACTGGCTTGTCATGCT 60.322 55.0 10.26 0.0 38.61 3.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1629 2227 0.105039 GCCGGTCTTGAGATACCTGG 59.895 60.0 1.9 0.0 34.55 4.45 R
3236 3885 0.034089 ATGTTTAGGCACCCAGGAGC 60.034 55.0 0.0 0.0 0.00 4.70 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 45 3.039526 CTCCCTCCCTCCCTCCCT 61.040 72.222 0.00 0.00 0.00 4.20
37 46 3.036959 TCCCTCCCTCCCTCCCTC 61.037 72.222 0.00 0.00 0.00 4.30
38 47 4.179599 CCCTCCCTCCCTCCCTCC 62.180 77.778 0.00 0.00 0.00 4.30
39 48 4.179599 CCTCCCTCCCTCCCTCCC 62.180 77.778 0.00 0.00 0.00 4.30
68 77 4.371786 CGGCATGCTCTGTTATCTTCTTA 58.628 43.478 18.92 0.00 0.00 2.10
122 143 5.458015 GGGTTGTTTGTGAGTAGTAAATGC 58.542 41.667 0.00 0.00 0.00 3.56
150 172 6.746364 GTGAATTACAGTGTTCGACCTAGTAG 59.254 42.308 0.00 0.00 0.00 2.57
152 174 7.607607 TGAATTACAGTGTTCGACCTAGTAGTA 59.392 37.037 0.00 0.00 0.00 1.82
153 175 6.727824 TTACAGTGTTCGACCTAGTAGTAC 57.272 41.667 0.00 0.00 0.00 2.73
154 176 4.645535 ACAGTGTTCGACCTAGTAGTACA 58.354 43.478 2.52 0.00 0.00 2.90
155 177 4.694509 ACAGTGTTCGACCTAGTAGTACAG 59.305 45.833 2.52 0.00 0.00 2.74
156 178 4.934001 CAGTGTTCGACCTAGTAGTACAGA 59.066 45.833 2.52 0.00 0.00 3.41
157 179 5.410746 CAGTGTTCGACCTAGTAGTACAGAA 59.589 44.000 2.52 0.00 0.00 3.02
158 180 6.000219 AGTGTTCGACCTAGTAGTACAGAAA 59.000 40.000 2.52 0.00 0.00 2.52
202 238 7.327275 CAGTACATATTCGAATTGCTAGACTCC 59.673 40.741 17.19 0.00 0.00 3.85
277 327 6.389091 TCCACAACATTGCATTGTTCTTATC 58.611 36.000 20.98 0.00 38.22 1.75
341 391 2.169561 TGCTCCTGTGTTGTTCAGTACA 59.830 45.455 0.00 0.00 34.12 2.90
362 798 6.398234 ACAGTATAAGATACCTGTGCAGAG 57.602 41.667 3.32 3.32 0.00 3.35
446 882 4.650754 TCTTACAGCCTTCTCCGATTAC 57.349 45.455 0.00 0.00 0.00 1.89
454 890 3.245519 GCCTTCTCCGATTACGATTTGTC 59.754 47.826 0.00 0.00 42.66 3.18
504 941 4.517285 AGAAAGTTCAGCAAGTTCTGTGA 58.483 39.130 0.00 0.00 35.63 3.58
561 1001 2.064014 GTTCGTCTCCCCTGTTTAACG 58.936 52.381 0.00 0.00 0.00 3.18
588 1029 6.166279 TCTTATGCTCTAGTTTTGTGAGTGG 58.834 40.000 0.00 0.00 0.00 4.00
596 1037 9.032420 GCTCTAGTTTTGTGAGTGGTAATATAC 57.968 37.037 0.00 0.00 0.00 1.47
636 1078 3.717400 TGTGCGAGAGGAAGATATGTC 57.283 47.619 0.00 0.00 0.00 3.06
645 1087 4.222588 AGAGGAAGATATGTCAGCTATGCC 59.777 45.833 0.00 0.00 0.00 4.40
646 1088 3.906218 AGGAAGATATGTCAGCTATGCCA 59.094 43.478 0.00 0.00 0.00 4.92
647 1089 4.535294 AGGAAGATATGTCAGCTATGCCAT 59.465 41.667 0.00 0.00 0.00 4.40
648 1090 4.634883 GGAAGATATGTCAGCTATGCCATG 59.365 45.833 0.00 0.00 0.00 3.66
649 1091 5.485620 GAAGATATGTCAGCTATGCCATGA 58.514 41.667 0.00 0.00 0.00 3.07
650 1092 5.695424 AGATATGTCAGCTATGCCATGAT 57.305 39.130 0.00 0.00 0.00 2.45
651 1093 5.429130 AGATATGTCAGCTATGCCATGATG 58.571 41.667 0.00 0.00 0.00 3.07
652 1094 3.782656 ATGTCAGCTATGCCATGATGA 57.217 42.857 0.00 0.00 0.00 2.92
653 1095 3.782656 TGTCAGCTATGCCATGATGAT 57.217 42.857 0.00 0.00 31.20 2.45
658 1100 3.883489 CAGCTATGCCATGATGATATGGG 59.117 47.826 6.88 0.00 46.23 4.00
676 1118 2.005370 GGGGGCATCATCATGTGAAT 57.995 50.000 0.00 0.00 40.97 2.57
830 1336 6.985188 TGGTTGATTAGCATCTAAACAGTC 57.015 37.500 0.00 0.00 0.00 3.51
922 1429 5.163237 ACAACTTCTAGCTTTCCCACAGTTA 60.163 40.000 0.00 0.00 0.00 2.24
933 1440 2.840038 TCCCACAGTTATCAGCTCACAT 59.160 45.455 0.00 0.00 0.00 3.21
1326 1840 5.163385 TGTGCACTAAGTACCTGTACTGTTT 60.163 40.000 19.41 0.00 44.96 2.83
1490 2088 3.384467 TGCTGCATATGTAGTAGACTGCA 59.616 43.478 20.18 12.14 42.54 4.41
1545 2143 1.930908 GCTGGACTGGCTTGTCATGC 61.931 60.000 11.85 2.09 38.61 4.06
1546 2144 0.322277 CTGGACTGGCTTGTCATGCT 60.322 55.000 10.26 0.00 38.61 3.79
1607 2205 1.402968 AGCAACTGACTGCACAAACAG 59.597 47.619 8.69 0.00 45.18 3.16
1626 2224 9.878599 ACAAACAGTAATTATTTCGAAGAAGTG 57.121 29.630 0.00 0.00 45.90 3.16
1649 2247 0.249073 CAGGTATCTCAAGACCGGCG 60.249 60.000 0.00 0.00 41.87 6.46
1653 2251 0.459585 TATCTCAAGACCGGCGTTGC 60.460 55.000 6.01 0.00 0.00 4.17
1656 2254 0.669318 CTCAAGACCGGCGTTGCTTA 60.669 55.000 6.01 0.00 0.00 3.09
1694 2292 8.012241 GCTGCTTGTATAATGTAGCTAACAATC 58.988 37.037 6.83 4.39 42.70 2.67
1695 2293 9.265901 CTGCTTGTATAATGTAGCTAACAATCT 57.734 33.333 6.83 0.00 42.70 2.40
1820 2418 7.605449 ACATCCCATGTATCTTCTTGTTTTTG 58.395 34.615 0.00 0.00 42.78 2.44
1821 2419 6.024552 TCCCATGTATCTTCTTGTTTTTGC 57.975 37.500 0.00 0.00 0.00 3.68
1873 2472 9.933723 AAGTTGATTTTTAAATCTCCATTGAGG 57.066 29.630 14.37 0.00 43.97 3.86
2086 2685 7.176589 TGGTTTTGTTTTCCTGTGAGTAATT 57.823 32.000 0.00 0.00 0.00 1.40
2093 2692 3.719268 TCCTGTGAGTAATTGCCATGT 57.281 42.857 0.00 0.00 0.00 3.21
2102 2701 5.418524 TGAGTAATTGCCATGTGCTAAATGT 59.581 36.000 7.54 0.00 42.00 2.71
2108 2707 3.056678 TGCCATGTGCTAAATGTTCTTGG 60.057 43.478 7.54 0.00 42.00 3.61
2110 2709 3.511146 CCATGTGCTAAATGTTCTTGGGT 59.489 43.478 0.00 0.00 0.00 4.51
2133 2732 2.299867 GTCCAGGTTTGATGCCATTGTT 59.700 45.455 0.00 0.00 0.00 2.83
2209 2808 8.159344 AGCATTAGGTATTGCAGAGTTTAATC 57.841 34.615 6.64 0.00 41.35 1.75
2275 2875 1.414181 AGCCTGATTCTGGATACACGG 59.586 52.381 13.34 0.00 46.17 4.94
2291 2891 2.151202 CACGGTTGTGCTGAAGGTAAT 58.849 47.619 0.00 0.00 39.67 1.89
2292 2892 2.095768 CACGGTTGTGCTGAAGGTAATG 60.096 50.000 0.00 0.00 39.67 1.90
2324 2926 1.676006 ACCCACAAACAAGAAGCTTCG 59.324 47.619 20.43 10.11 0.00 3.79
2326 2928 1.676006 CCACAAACAAGAAGCTTCGGT 59.324 47.619 20.43 18.86 0.00 4.69
2327 2929 2.099098 CCACAAACAAGAAGCTTCGGTT 59.901 45.455 24.70 24.70 33.26 4.44
2345 2947 4.021807 TCGGTTCACAGTGTGCTTATTAGA 60.022 41.667 18.80 8.15 32.98 2.10
2351 2953 8.936864 GTTCACAGTGTGCTTATTAGAACTAAT 58.063 33.333 18.80 11.09 35.43 1.73
2499 3104 5.857268 AGTGCTGGTATGCAATTTTCTTTT 58.143 33.333 0.00 0.00 45.12 2.27
2500 3105 5.697633 AGTGCTGGTATGCAATTTTCTTTTG 59.302 36.000 0.00 0.00 45.12 2.44
2541 3146 2.286125 CGTGCAGACATCGTGTTTCAAA 60.286 45.455 0.00 0.00 0.00 2.69
2542 3147 3.035942 GTGCAGACATCGTGTTTCAAAC 58.964 45.455 0.00 0.00 0.00 2.93
2543 3148 2.942376 TGCAGACATCGTGTTTCAAACT 59.058 40.909 1.10 0.00 0.00 2.66
2544 3149 3.376859 TGCAGACATCGTGTTTCAAACTT 59.623 39.130 1.10 0.00 0.00 2.66
2545 3150 4.142491 TGCAGACATCGTGTTTCAAACTTT 60.142 37.500 1.10 0.00 0.00 2.66
2546 3151 4.437820 GCAGACATCGTGTTTCAAACTTTC 59.562 41.667 1.10 0.00 0.00 2.62
2547 3152 5.568482 CAGACATCGTGTTTCAAACTTTCA 58.432 37.500 1.10 0.00 0.00 2.69
2548 3153 6.027131 CAGACATCGTGTTTCAAACTTTCAA 58.973 36.000 1.10 0.00 0.00 2.69
2636 3241 1.993701 TTTGGTGGCTGACTGGCTGA 61.994 55.000 7.41 0.00 42.34 4.26
2661 3266 7.946207 ACTGACTGATTATTACTGATGTCGAT 58.054 34.615 0.00 0.00 0.00 3.59
2712 3317 7.095229 TGTGAAGGAATTTTCTGAGATACAACG 60.095 37.037 0.00 0.00 0.00 4.10
2714 3319 5.245531 AGGAATTTTCTGAGATACAACGCA 58.754 37.500 0.00 0.00 0.00 5.24
2719 3324 4.471904 TTCTGAGATACAACGCAGGATT 57.528 40.909 0.00 0.00 38.04 3.01
2777 3382 2.287547 TGTTTCTGTTTGCCTGATTCGC 60.288 45.455 0.00 0.00 0.00 4.70
2811 3416 4.630430 GCTAAGGGGCCCTAATAACAGTTT 60.630 45.833 29.08 8.61 31.13 2.66
2818 3423 6.338146 GGGCCCTAATAACAGTTTTGATTTC 58.662 40.000 17.04 0.00 0.00 2.17
2845 3450 2.961526 ATATCTGTTTCTCCGCACGT 57.038 45.000 0.00 0.00 0.00 4.49
2853 3458 0.878523 TTCTCCGCACGTTCTGTTGG 60.879 55.000 0.00 0.00 0.00 3.77
2890 3495 5.105752 AGTGCTAAGAAGAAGAATGCTACG 58.894 41.667 0.00 0.00 0.00 3.51
2892 3497 3.865745 GCTAAGAAGAAGAATGCTACGCA 59.134 43.478 0.00 0.00 44.86 5.24
3037 3667 6.373779 GCCAAGTTGATGTATGTATGTATGC 58.626 40.000 3.87 0.00 0.00 3.14
3056 3689 2.807967 TGCATGCTAGTGTTGTCAAGAC 59.192 45.455 20.33 4.71 0.00 3.01
3072 3705 5.482908 GTCAAGACTGACCAAGTATGTCAT 58.517 41.667 0.00 0.00 45.41 3.06
3115 3762 1.404391 CTGGCTGAGATGAAACCATGC 59.596 52.381 0.00 0.00 0.00 4.06
3117 3764 1.372582 GCTGAGATGAAACCATGCGA 58.627 50.000 0.00 0.00 0.00 5.10
3119 3766 1.325640 CTGAGATGAAACCATGCGACG 59.674 52.381 0.00 0.00 0.00 5.12
3138 3786 2.365617 ACGTCCATCACAAGACAAGAGT 59.634 45.455 0.00 0.00 33.08 3.24
3143 3791 5.866633 GTCCATCACAAGACAAGAGTAAGAG 59.133 44.000 0.00 0.00 33.08 2.85
3165 3814 0.604578 TCAAGGCAATTGCTTGAGGC 59.395 50.000 28.42 11.81 41.70 4.70
3166 3815 0.390735 CAAGGCAATTGCTTGAGGCC 60.391 55.000 28.42 11.33 44.92 5.19
3167 3816 2.182537 GGCAATTGCTTGAGGCCG 59.817 61.111 28.42 0.00 41.70 6.13
3168 3817 2.507769 GCAATTGCTTGAGGCCGC 60.508 61.111 23.21 0.00 40.92 6.53
3169 3818 2.964174 CAATTGCTTGAGGCCGCA 59.036 55.556 4.49 4.49 40.92 5.69
3170 3819 1.444895 CAATTGCTTGAGGCCGCAC 60.445 57.895 9.41 0.00 40.92 5.34
3171 3820 1.902918 AATTGCTTGAGGCCGCACA 60.903 52.632 9.41 1.36 40.92 4.57
3172 3821 1.870055 AATTGCTTGAGGCCGCACAG 61.870 55.000 9.41 11.20 40.92 3.66
3173 3822 2.753009 ATTGCTTGAGGCCGCACAGA 62.753 55.000 9.41 0.00 40.92 3.41
3174 3823 2.669569 GCTTGAGGCCGCACAGAA 60.670 61.111 9.41 0.00 34.27 3.02
3175 3824 2.042831 GCTTGAGGCCGCACAGAAT 61.043 57.895 9.41 0.00 34.27 2.40
3176 3825 1.589716 GCTTGAGGCCGCACAGAATT 61.590 55.000 9.41 0.00 34.27 2.17
3177 3826 0.883833 CTTGAGGCCGCACAGAATTT 59.116 50.000 9.41 0.00 0.00 1.82
3178 3827 1.270550 CTTGAGGCCGCACAGAATTTT 59.729 47.619 9.41 0.00 0.00 1.82
3179 3828 2.192664 TGAGGCCGCACAGAATTTTA 57.807 45.000 4.49 0.00 0.00 1.52
3180 3829 2.083774 TGAGGCCGCACAGAATTTTAG 58.916 47.619 4.49 0.00 0.00 1.85
3181 3830 1.401905 GAGGCCGCACAGAATTTTAGG 59.598 52.381 0.00 0.00 0.00 2.69
3182 3831 0.455815 GGCCGCACAGAATTTTAGGG 59.544 55.000 0.00 0.00 0.00 3.53
3183 3832 0.455815 GCCGCACAGAATTTTAGGGG 59.544 55.000 0.00 0.00 35.61 4.79
3184 3833 0.455815 CCGCACAGAATTTTAGGGGC 59.544 55.000 0.00 0.00 0.00 5.80
3185 3834 1.463674 CGCACAGAATTTTAGGGGCT 58.536 50.000 0.00 0.00 0.00 5.19
3186 3835 2.639065 CGCACAGAATTTTAGGGGCTA 58.361 47.619 0.00 0.00 0.00 3.93
3187 3836 2.354821 CGCACAGAATTTTAGGGGCTAC 59.645 50.000 0.00 0.00 0.00 3.58
3188 3837 3.352648 GCACAGAATTTTAGGGGCTACA 58.647 45.455 0.00 0.00 0.00 2.74
3189 3838 3.954258 GCACAGAATTTTAGGGGCTACAT 59.046 43.478 0.00 0.00 0.00 2.29
3190 3839 4.402474 GCACAGAATTTTAGGGGCTACATT 59.598 41.667 0.00 0.00 0.00 2.71
3191 3840 5.105351 GCACAGAATTTTAGGGGCTACATTT 60.105 40.000 0.00 0.00 0.00 2.32
3192 3841 6.332630 CACAGAATTTTAGGGGCTACATTTG 58.667 40.000 0.00 0.00 0.00 2.32
3193 3842 5.422012 ACAGAATTTTAGGGGCTACATTTGG 59.578 40.000 0.00 0.00 0.00 3.28
3194 3843 5.422012 CAGAATTTTAGGGGCTACATTTGGT 59.578 40.000 0.00 0.00 0.00 3.67
3195 3844 6.022958 AGAATTTTAGGGGCTACATTTGGTT 58.977 36.000 0.00 0.00 0.00 3.67
3196 3845 6.500400 AGAATTTTAGGGGCTACATTTGGTTT 59.500 34.615 0.00 0.00 0.00 3.27
3197 3846 5.731957 TTTTAGGGGCTACATTTGGTTTC 57.268 39.130 0.00 0.00 0.00 2.78
3198 3847 2.231716 AGGGGCTACATTTGGTTTCC 57.768 50.000 0.00 0.00 0.00 3.13
3199 3848 1.431243 AGGGGCTACATTTGGTTTCCA 59.569 47.619 0.00 0.00 0.00 3.53
3200 3849 1.548719 GGGGCTACATTTGGTTTCCAC 59.451 52.381 0.00 0.00 30.78 4.02
3201 3850 1.201414 GGGCTACATTTGGTTTCCACG 59.799 52.381 0.00 0.00 30.78 4.94
3202 3851 1.201414 GGCTACATTTGGTTTCCACGG 59.799 52.381 0.00 0.00 30.78 4.94
3203 3852 2.156098 GCTACATTTGGTTTCCACGGA 58.844 47.619 0.00 0.00 30.78 4.69
3204 3853 2.161609 GCTACATTTGGTTTCCACGGAG 59.838 50.000 0.00 0.00 30.78 4.63
3205 3854 2.649531 ACATTTGGTTTCCACGGAGA 57.350 45.000 0.00 0.00 30.78 3.71
3206 3855 2.227194 ACATTTGGTTTCCACGGAGAC 58.773 47.619 0.00 0.00 30.78 3.36
3207 3856 2.158667 ACATTTGGTTTCCACGGAGACT 60.159 45.455 6.70 0.00 30.78 3.24
3208 3857 2.721425 TTTGGTTTCCACGGAGACTT 57.279 45.000 6.70 0.00 30.78 3.01
3209 3858 2.721425 TTGGTTTCCACGGAGACTTT 57.279 45.000 6.70 0.00 30.78 2.66
3210 3859 1.961793 TGGTTTCCACGGAGACTTTG 58.038 50.000 6.70 0.00 31.01 2.77
3211 3860 1.235724 GGTTTCCACGGAGACTTTGG 58.764 55.000 6.70 0.00 33.51 3.28
3212 3861 1.202722 GGTTTCCACGGAGACTTTGGA 60.203 52.381 6.70 0.00 38.14 3.53
3213 3862 2.567985 GTTTCCACGGAGACTTTGGAA 58.432 47.619 9.12 9.12 44.18 3.53
3214 3863 2.543777 TTCCACGGAGACTTTGGAAG 57.456 50.000 9.12 0.00 42.23 3.46
3215 3864 1.712056 TCCACGGAGACTTTGGAAGA 58.288 50.000 0.11 0.00 37.27 2.87
3216 3865 2.257207 TCCACGGAGACTTTGGAAGAT 58.743 47.619 0.11 0.00 37.27 2.40
3217 3866 2.233922 TCCACGGAGACTTTGGAAGATC 59.766 50.000 0.11 0.00 37.27 2.75
3218 3867 2.234908 CCACGGAGACTTTGGAAGATCT 59.765 50.000 0.00 0.00 33.96 2.75
3219 3868 3.516615 CACGGAGACTTTGGAAGATCTC 58.483 50.000 0.00 9.68 36.15 2.75
3220 3869 2.498078 ACGGAGACTTTGGAAGATCTCC 59.502 50.000 18.84 18.84 44.05 3.71
3234 3883 2.619147 GATCTCCATGATCGCCATCTG 58.381 52.381 0.00 0.00 41.68 2.90
3235 3884 1.417288 TCTCCATGATCGCCATCTGT 58.583 50.000 0.00 0.00 31.94 3.41
3236 3885 1.069668 TCTCCATGATCGCCATCTGTG 59.930 52.381 0.00 0.00 31.94 3.66
3237 3886 0.533531 TCCATGATCGCCATCTGTGC 60.534 55.000 0.00 0.00 31.94 4.57
3238 3887 0.534427 CCATGATCGCCATCTGTGCT 60.534 55.000 0.00 0.00 31.94 4.40
3239 3888 0.866427 CATGATCGCCATCTGTGCTC 59.134 55.000 0.00 0.00 31.94 4.26
3240 3889 0.250209 ATGATCGCCATCTGTGCTCC 60.250 55.000 0.00 0.00 0.00 4.70
3241 3890 1.332889 TGATCGCCATCTGTGCTCCT 61.333 55.000 0.00 0.00 0.00 3.69
3242 3891 0.879400 GATCGCCATCTGTGCTCCTG 60.879 60.000 0.00 0.00 0.00 3.86
3243 3892 2.321263 ATCGCCATCTGTGCTCCTGG 62.321 60.000 0.00 0.00 0.00 4.45
3244 3893 2.124403 GCCATCTGTGCTCCTGGG 60.124 66.667 0.00 0.00 0.00 4.45
3245 3894 2.976490 GCCATCTGTGCTCCTGGGT 61.976 63.158 0.00 0.00 0.00 4.51
3246 3895 1.077930 CCATCTGTGCTCCTGGGTG 60.078 63.158 0.00 0.00 0.00 4.61
3247 3896 1.748122 CATCTGTGCTCCTGGGTGC 60.748 63.158 6.72 6.72 35.46 5.01
3248 3897 2.976490 ATCTGTGCTCCTGGGTGCC 61.976 63.158 10.57 3.95 34.16 5.01
3249 3898 3.644606 CTGTGCTCCTGGGTGCCT 61.645 66.667 10.57 0.00 34.16 4.75
3250 3899 2.203922 TGTGCTCCTGGGTGCCTA 60.204 61.111 10.57 0.00 34.16 3.93
3251 3900 1.841302 CTGTGCTCCTGGGTGCCTAA 61.841 60.000 10.57 0.00 34.16 2.69
3252 3901 1.378762 GTGCTCCTGGGTGCCTAAA 59.621 57.895 10.57 0.00 34.16 1.85
3253 3902 0.960861 GTGCTCCTGGGTGCCTAAAC 60.961 60.000 10.57 0.00 34.16 2.01
3254 3903 1.378762 GCTCCTGGGTGCCTAAACA 59.621 57.895 2.60 0.00 0.00 2.83
3255 3904 0.034089 GCTCCTGGGTGCCTAAACAT 60.034 55.000 2.60 0.00 0.00 2.71
3256 3905 2.019156 GCTCCTGGGTGCCTAAACATC 61.019 57.143 2.60 0.00 0.00 3.06
3257 3906 1.281867 CTCCTGGGTGCCTAAACATCA 59.718 52.381 0.00 0.00 0.00 3.07
3258 3907 1.281867 TCCTGGGTGCCTAAACATCAG 59.718 52.381 0.00 0.00 0.00 2.90
3259 3908 1.098050 CTGGGTGCCTAAACATCAGC 58.902 55.000 0.00 0.00 0.00 4.26
3260 3909 0.403655 TGGGTGCCTAAACATCAGCA 59.596 50.000 0.00 0.00 0.00 4.41
3261 3910 1.098050 GGGTGCCTAAACATCAGCAG 58.902 55.000 0.00 0.00 35.56 4.24
3262 3911 0.453390 GGTGCCTAAACATCAGCAGC 59.547 55.000 0.00 0.00 45.16 5.25
3263 3912 1.167851 GTGCCTAAACATCAGCAGCA 58.832 50.000 0.00 0.00 35.56 4.41
3264 3913 1.541147 GTGCCTAAACATCAGCAGCAA 59.459 47.619 0.00 0.00 35.56 3.91
3265 3914 2.165030 GTGCCTAAACATCAGCAGCAAT 59.835 45.455 0.00 0.00 35.56 3.56
3266 3915 3.378112 GTGCCTAAACATCAGCAGCAATA 59.622 43.478 0.00 0.00 35.56 1.90
3267 3916 4.037208 GTGCCTAAACATCAGCAGCAATAT 59.963 41.667 0.00 0.00 35.56 1.28
3268 3917 4.646040 TGCCTAAACATCAGCAGCAATATT 59.354 37.500 0.00 0.00 0.00 1.28
3269 3918 5.127519 TGCCTAAACATCAGCAGCAATATTT 59.872 36.000 0.00 0.00 0.00 1.40
3270 3919 6.044682 GCCTAAACATCAGCAGCAATATTTT 58.955 36.000 0.00 0.00 0.00 1.82
3271 3920 6.019318 GCCTAAACATCAGCAGCAATATTTTG 60.019 38.462 0.00 0.00 35.85 2.44
3288 3937 9.333497 CAATATTTTGCACCATCATTCTATACG 57.667 33.333 0.00 0.00 0.00 3.06
3289 3938 4.811555 TTTGCACCATCATTCTATACGC 57.188 40.909 0.00 0.00 0.00 4.42
3290 3939 3.467374 TGCACCATCATTCTATACGCA 57.533 42.857 0.00 0.00 0.00 5.24
3291 3940 3.392882 TGCACCATCATTCTATACGCAG 58.607 45.455 0.00 0.00 0.00 5.18
3292 3941 2.738846 GCACCATCATTCTATACGCAGG 59.261 50.000 0.00 0.00 0.00 4.85
3293 3942 3.329386 CACCATCATTCTATACGCAGGG 58.671 50.000 0.00 0.00 0.00 4.45
3294 3943 3.006859 CACCATCATTCTATACGCAGGGA 59.993 47.826 0.00 0.00 0.00 4.20
3295 3944 3.259374 ACCATCATTCTATACGCAGGGAG 59.741 47.826 0.00 0.00 0.00 4.30
3296 3945 3.368843 CCATCATTCTATACGCAGGGAGG 60.369 52.174 0.00 0.00 0.00 4.30
3297 3946 3.238788 TCATTCTATACGCAGGGAGGA 57.761 47.619 0.00 0.00 0.00 3.71
3298 3947 2.891580 TCATTCTATACGCAGGGAGGAC 59.108 50.000 0.00 0.00 0.00 3.85
3299 3948 2.447408 TTCTATACGCAGGGAGGACA 57.553 50.000 0.00 0.00 0.00 4.02
3300 3949 2.447408 TCTATACGCAGGGAGGACAA 57.553 50.000 0.00 0.00 0.00 3.18
3301 3950 2.742348 TCTATACGCAGGGAGGACAAA 58.258 47.619 0.00 0.00 0.00 2.83
3302 3951 2.429610 TCTATACGCAGGGAGGACAAAC 59.570 50.000 0.00 0.00 0.00 2.93
3303 3952 0.981183 ATACGCAGGGAGGACAAACA 59.019 50.000 0.00 0.00 0.00 2.83
3304 3953 0.981183 TACGCAGGGAGGACAAACAT 59.019 50.000 0.00 0.00 0.00 2.71
3305 3954 0.110486 ACGCAGGGAGGACAAACATT 59.890 50.000 0.00 0.00 0.00 2.71
3306 3955 1.349688 ACGCAGGGAGGACAAACATTA 59.650 47.619 0.00 0.00 0.00 1.90
3307 3956 2.026262 ACGCAGGGAGGACAAACATTAT 60.026 45.455 0.00 0.00 0.00 1.28
3308 3957 3.199071 ACGCAGGGAGGACAAACATTATA 59.801 43.478 0.00 0.00 0.00 0.98
3309 3958 4.141482 ACGCAGGGAGGACAAACATTATAT 60.141 41.667 0.00 0.00 0.00 0.86
3310 3959 5.071250 ACGCAGGGAGGACAAACATTATATA 59.929 40.000 0.00 0.00 0.00 0.86
3311 3960 5.639506 CGCAGGGAGGACAAACATTATATAG 59.360 44.000 0.00 0.00 0.00 1.31
3312 3961 6.518369 CGCAGGGAGGACAAACATTATATAGA 60.518 42.308 0.00 0.00 0.00 1.98
3313 3962 6.651225 GCAGGGAGGACAAACATTATATAGAC 59.349 42.308 0.00 0.00 0.00 2.59
3314 3963 7.162082 CAGGGAGGACAAACATTATATAGACC 58.838 42.308 0.00 0.00 0.00 3.85
3315 3964 6.849697 AGGGAGGACAAACATTATATAGACCA 59.150 38.462 0.00 0.00 0.00 4.02
3316 3965 7.016661 AGGGAGGACAAACATTATATAGACCAG 59.983 40.741 0.00 0.00 0.00 4.00
3317 3966 7.016268 GGGAGGACAAACATTATATAGACCAGA 59.984 40.741 0.00 0.00 0.00 3.86
3318 3967 8.598041 GGAGGACAAACATTATATAGACCAGAT 58.402 37.037 0.00 0.00 0.00 2.90
3319 3968 9.429359 GAGGACAAACATTATATAGACCAGATG 57.571 37.037 0.00 0.00 0.00 2.90
3320 3969 7.880195 AGGACAAACATTATATAGACCAGATGC 59.120 37.037 0.00 0.00 0.00 3.91
3321 3970 7.119846 GGACAAACATTATATAGACCAGATGCC 59.880 40.741 0.00 0.00 0.00 4.40
3322 3971 7.517320 ACAAACATTATATAGACCAGATGCCA 58.483 34.615 0.00 0.00 0.00 4.92
3323 3972 7.998383 ACAAACATTATATAGACCAGATGCCAA 59.002 33.333 0.00 0.00 0.00 4.52
3324 3973 7.986085 AACATTATATAGACCAGATGCCAAC 57.014 36.000 0.00 0.00 0.00 3.77
3325 3974 7.078249 ACATTATATAGACCAGATGCCAACA 57.922 36.000 0.00 0.00 0.00 3.33
3326 3975 6.936900 ACATTATATAGACCAGATGCCAACAC 59.063 38.462 0.00 0.00 0.00 3.32
3327 3976 6.493189 TTATATAGACCAGATGCCAACACA 57.507 37.500 0.00 0.00 0.00 3.72
3328 3977 2.768253 TAGACCAGATGCCAACACAG 57.232 50.000 0.00 0.00 0.00 3.66
3329 3978 0.607489 AGACCAGATGCCAACACAGC 60.607 55.000 0.00 0.00 0.00 4.40
3330 3979 1.589716 GACCAGATGCCAACACAGCC 61.590 60.000 0.00 0.00 0.00 4.85
3331 3980 2.345760 CCAGATGCCAACACAGCCC 61.346 63.158 0.00 0.00 0.00 5.19
3332 3981 1.303888 CAGATGCCAACACAGCCCT 60.304 57.895 0.00 0.00 0.00 5.19
3333 3982 1.303888 AGATGCCAACACAGCCCTG 60.304 57.895 0.00 0.00 0.00 4.45
3334 3983 1.303561 GATGCCAACACAGCCCTGA 60.304 57.895 1.69 0.00 0.00 3.86
3335 3984 1.589716 GATGCCAACACAGCCCTGAC 61.590 60.000 1.69 0.00 0.00 3.51
3336 3985 3.357079 GCCAACACAGCCCTGACG 61.357 66.667 1.69 0.00 0.00 4.35
3337 3986 2.111043 CCAACACAGCCCTGACGT 59.889 61.111 1.69 0.00 0.00 4.34
3338 3987 1.961277 CCAACACAGCCCTGACGTC 60.961 63.158 9.11 9.11 0.00 4.34
3339 3988 2.029073 AACACAGCCCTGACGTCG 59.971 61.111 11.62 5.76 0.00 5.12
3340 3989 2.792947 AACACAGCCCTGACGTCGT 61.793 57.895 11.62 0.00 0.00 4.34
3341 3990 2.734723 CACAGCCCTGACGTCGTG 60.735 66.667 11.62 7.80 0.00 4.35
3342 3991 3.991051 ACAGCCCTGACGTCGTGG 61.991 66.667 16.56 16.56 0.00 4.94
3343 3992 3.991051 CAGCCCTGACGTCGTGGT 61.991 66.667 20.40 10.48 0.00 4.16
3344 3993 3.231736 AGCCCTGACGTCGTGGTT 61.232 61.111 20.40 14.05 0.00 3.67
3345 3994 2.280592 GCCCTGACGTCGTGGTTT 60.281 61.111 20.40 0.00 0.00 3.27
3346 3995 1.890510 GCCCTGACGTCGTGGTTTT 60.891 57.895 20.40 0.00 0.00 2.43
3347 3996 0.600782 GCCCTGACGTCGTGGTTTTA 60.601 55.000 20.40 0.00 0.00 1.52
3348 3997 1.142474 CCCTGACGTCGTGGTTTTAC 58.858 55.000 20.96 0.00 0.00 2.01
3349 3998 0.780002 CCTGACGTCGTGGTTTTACG 59.220 55.000 11.62 0.00 44.98 3.18
3350 3999 0.160182 CTGACGTCGTGGTTTTACGC 59.840 55.000 11.62 0.00 43.40 4.42
3351 4000 0.527169 TGACGTCGTGGTTTTACGCA 60.527 50.000 11.62 0.00 43.40 5.24
3352 4001 0.111574 GACGTCGTGGTTTTACGCAC 60.112 55.000 0.63 0.00 43.40 5.34
3353 4002 0.805322 ACGTCGTGGTTTTACGCACA 60.805 50.000 0.00 0.00 43.40 4.57
3354 4003 0.301088 CGTCGTGGTTTTACGCACAA 59.699 50.000 0.00 0.00 43.40 3.33
3355 4004 1.655325 CGTCGTGGTTTTACGCACAAG 60.655 52.381 0.00 0.00 43.40 3.16
3356 4005 1.593933 GTCGTGGTTTTACGCACAAGA 59.406 47.619 0.00 0.00 43.40 3.02
3357 4006 2.222445 GTCGTGGTTTTACGCACAAGAT 59.778 45.455 0.00 0.00 43.40 2.40
3358 4007 3.429543 GTCGTGGTTTTACGCACAAGATA 59.570 43.478 0.00 0.00 43.40 1.98
3359 4008 4.092383 GTCGTGGTTTTACGCACAAGATAT 59.908 41.667 0.00 0.00 43.40 1.63
3360 4009 5.289193 GTCGTGGTTTTACGCACAAGATATA 59.711 40.000 0.00 0.00 43.40 0.86
3361 4010 6.019318 GTCGTGGTTTTACGCACAAGATATAT 60.019 38.462 0.00 0.00 43.40 0.86
3362 4011 7.167968 GTCGTGGTTTTACGCACAAGATATATA 59.832 37.037 0.00 0.00 43.40 0.86
3363 4012 7.380333 TCGTGGTTTTACGCACAAGATATATAG 59.620 37.037 0.00 0.00 43.40 1.31
3364 4013 7.288672 GTGGTTTTACGCACAAGATATATAGC 58.711 38.462 0.00 0.00 0.00 2.97
3365 4014 6.987404 TGGTTTTACGCACAAGATATATAGCA 59.013 34.615 0.07 0.00 0.00 3.49
3366 4015 7.659799 TGGTTTTACGCACAAGATATATAGCAT 59.340 33.333 0.07 0.00 0.00 3.79
3367 4016 8.169268 GGTTTTACGCACAAGATATATAGCATC 58.831 37.037 0.07 0.00 0.00 3.91
3368 4017 7.506296 TTTACGCACAAGATATATAGCATCG 57.494 36.000 0.07 0.00 0.00 3.84
3369 4018 4.424626 ACGCACAAGATATATAGCATCGG 58.575 43.478 0.07 0.00 0.00 4.18
3370 4019 3.243877 CGCACAAGATATATAGCATCGGC 59.756 47.826 0.07 0.00 41.61 5.54
3371 4020 4.183865 GCACAAGATATATAGCATCGGCA 58.816 43.478 0.07 0.00 44.61 5.69
3372 4021 4.813161 GCACAAGATATATAGCATCGGCAT 59.187 41.667 0.07 0.00 44.61 4.40
3373 4022 5.050499 GCACAAGATATATAGCATCGGCATC 60.050 44.000 0.07 0.00 44.61 3.91
3374 4023 6.044682 CACAAGATATATAGCATCGGCATCA 58.955 40.000 0.07 0.00 44.61 3.07
3375 4024 6.200475 CACAAGATATATAGCATCGGCATCAG 59.800 42.308 0.07 0.00 44.61 2.90
3376 4025 4.880759 AGATATATAGCATCGGCATCAGC 58.119 43.478 0.07 0.00 44.61 4.26
3377 4026 4.343239 AGATATATAGCATCGGCATCAGCA 59.657 41.667 0.07 0.00 44.61 4.41
3378 4027 2.375173 TATAGCATCGGCATCAGCAG 57.625 50.000 0.00 0.00 44.61 4.24
3379 4028 0.321387 ATAGCATCGGCATCAGCAGG 60.321 55.000 0.00 0.00 44.61 4.85
3380 4029 2.387476 TAGCATCGGCATCAGCAGGG 62.387 60.000 0.00 0.00 44.61 4.45
3381 4030 2.507452 CATCGGCATCAGCAGGGA 59.493 61.111 0.00 0.00 44.61 4.20
3382 4031 1.153107 CATCGGCATCAGCAGGGAA 60.153 57.895 0.00 0.00 44.61 3.97
3383 4032 1.147824 ATCGGCATCAGCAGGGAAG 59.852 57.895 0.00 0.00 44.61 3.46
3384 4033 1.340399 ATCGGCATCAGCAGGGAAGA 61.340 55.000 0.00 0.00 44.61 2.87
3385 4034 1.147824 CGGCATCAGCAGGGAAGAT 59.852 57.895 0.00 0.00 44.61 2.40
3386 4035 1.164662 CGGCATCAGCAGGGAAGATG 61.165 60.000 0.00 0.00 44.61 2.90
3387 4036 0.106819 GGCATCAGCAGGGAAGATGT 60.107 55.000 0.00 0.00 44.61 3.06
3388 4037 1.307097 GCATCAGCAGGGAAGATGTC 58.693 55.000 0.00 0.00 40.86 3.06
3389 4038 2.084075 GCATCAGCAGGGAAGATGTCC 61.084 57.143 0.00 0.00 42.84 4.02
3397 4046 3.987594 GGAAGATGTCCCTGGCTTT 57.012 52.632 0.00 0.00 41.10 3.51
3398 4047 1.467920 GGAAGATGTCCCTGGCTTTG 58.532 55.000 0.00 0.00 41.10 2.77
3399 4048 1.272147 GGAAGATGTCCCTGGCTTTGT 60.272 52.381 0.00 0.00 41.10 2.83
3400 4049 2.087646 GAAGATGTCCCTGGCTTTGTC 58.912 52.381 0.00 0.00 0.00 3.18
3401 4050 1.366319 AGATGTCCCTGGCTTTGTCT 58.634 50.000 0.00 0.00 0.00 3.41
3402 4051 1.707427 AGATGTCCCTGGCTTTGTCTT 59.293 47.619 0.00 0.00 0.00 3.01
3403 4052 2.087646 GATGTCCCTGGCTTTGTCTTC 58.912 52.381 0.00 0.00 0.00 2.87
3404 4053 0.110486 TGTCCCTGGCTTTGTCTTCC 59.890 55.000 0.00 0.00 0.00 3.46
3405 4054 0.110486 GTCCCTGGCTTTGTCTTCCA 59.890 55.000 0.00 0.00 0.00 3.53
3406 4055 0.850100 TCCCTGGCTTTGTCTTCCAA 59.150 50.000 0.00 0.00 0.00 3.53
3407 4056 0.961753 CCCTGGCTTTGTCTTCCAAC 59.038 55.000 0.00 0.00 31.20 3.77
3408 4057 0.961753 CCTGGCTTTGTCTTCCAACC 59.038 55.000 0.00 0.00 31.20 3.77
3409 4058 1.691196 CTGGCTTTGTCTTCCAACCA 58.309 50.000 0.00 0.00 31.20 3.67
3410 4059 2.031120 CTGGCTTTGTCTTCCAACCAA 58.969 47.619 0.00 0.00 31.03 3.67
3411 4060 2.430332 CTGGCTTTGTCTTCCAACCAAA 59.570 45.455 0.00 0.00 31.03 3.28
3412 4061 2.430332 TGGCTTTGTCTTCCAACCAAAG 59.570 45.455 6.92 6.92 44.90 2.77
3413 4062 2.430694 GGCTTTGTCTTCCAACCAAAGT 59.569 45.455 11.60 0.00 44.28 2.66
3414 4063 3.490933 GGCTTTGTCTTCCAACCAAAGTC 60.491 47.826 11.60 6.69 44.28 3.01
3415 4064 3.490933 GCTTTGTCTTCCAACCAAAGTCC 60.491 47.826 11.60 0.00 44.28 3.85
3416 4065 1.961793 TGTCTTCCAACCAAAGTCCG 58.038 50.000 0.00 0.00 0.00 4.79
3417 4066 1.210967 TGTCTTCCAACCAAAGTCCGT 59.789 47.619 0.00 0.00 0.00 4.69
3418 4067 1.871676 GTCTTCCAACCAAAGTCCGTC 59.128 52.381 0.00 0.00 0.00 4.79
3419 4068 1.487142 TCTTCCAACCAAAGTCCGTCA 59.513 47.619 0.00 0.00 0.00 4.35
3420 4069 2.105821 TCTTCCAACCAAAGTCCGTCAT 59.894 45.455 0.00 0.00 0.00 3.06
3421 4070 2.178912 TCCAACCAAAGTCCGTCATC 57.821 50.000 0.00 0.00 0.00 2.92
3422 4071 1.697432 TCCAACCAAAGTCCGTCATCT 59.303 47.619 0.00 0.00 0.00 2.90
3423 4072 2.105821 TCCAACCAAAGTCCGTCATCTT 59.894 45.455 0.00 0.00 0.00 2.40
3424 4073 2.884639 CCAACCAAAGTCCGTCATCTTT 59.115 45.455 0.00 0.00 34.74 2.52
3425 4074 3.317993 CCAACCAAAGTCCGTCATCTTTT 59.682 43.478 0.00 0.00 32.52 2.27
3426 4075 4.290155 CAACCAAAGTCCGTCATCTTTTG 58.710 43.478 0.00 0.00 32.52 2.44
3427 4076 3.815809 ACCAAAGTCCGTCATCTTTTGA 58.184 40.909 0.00 0.00 32.52 2.69
3444 4093 9.403110 CATCTTTTGACATTCTTAAGAAGTTGG 57.597 33.333 21.75 13.62 37.48 3.77
3445 4094 8.519799 TCTTTTGACATTCTTAAGAAGTTGGT 57.480 30.769 21.75 16.25 37.48 3.67
3446 4095 8.966868 TCTTTTGACATTCTTAAGAAGTTGGTT 58.033 29.630 21.75 2.71 37.48 3.67
3447 4096 9.237846 CTTTTGACATTCTTAAGAAGTTGGTTC 57.762 33.333 21.75 11.56 37.48 3.62
3448 4097 7.873719 TTGACATTCTTAAGAAGTTGGTTCA 57.126 32.000 21.75 13.56 37.67 3.18
3449 4098 7.873719 TGACATTCTTAAGAAGTTGGTTCAA 57.126 32.000 21.75 6.55 37.67 2.69
3450 4099 8.287439 TGACATTCTTAAGAAGTTGGTTCAAA 57.713 30.769 21.75 0.00 37.67 2.69
3451 4100 8.744652 TGACATTCTTAAGAAGTTGGTTCAAAA 58.255 29.630 21.75 0.00 37.67 2.44
3452 4101 9.750125 GACATTCTTAAGAAGTTGGTTCAAAAT 57.250 29.630 21.75 0.00 37.67 1.82
3455 4104 8.940768 TTCTTAAGAAGTTGGTTCAAAATTGG 57.059 30.769 13.99 0.00 37.67 3.16
3456 4105 7.496747 TCTTAAGAAGTTGGTTCAAAATTGGG 58.503 34.615 1.68 0.00 37.67 4.12
3457 4106 5.948742 AAGAAGTTGGTTCAAAATTGGGA 57.051 34.783 0.00 0.00 37.67 4.37
3458 4107 6.499106 AAGAAGTTGGTTCAAAATTGGGAT 57.501 33.333 0.00 0.00 37.67 3.85
3459 4108 7.610580 AAGAAGTTGGTTCAAAATTGGGATA 57.389 32.000 0.00 0.00 37.67 2.59
3460 4109 7.797121 AGAAGTTGGTTCAAAATTGGGATAT 57.203 32.000 0.00 0.00 37.67 1.63
3461 4110 7.840931 AGAAGTTGGTTCAAAATTGGGATATC 58.159 34.615 0.00 0.00 37.67 1.63
3462 4111 7.454380 AGAAGTTGGTTCAAAATTGGGATATCA 59.546 33.333 4.83 0.00 37.67 2.15
3463 4112 7.738437 AGTTGGTTCAAAATTGGGATATCAT 57.262 32.000 4.83 0.00 0.00 2.45
3464 4113 8.837099 AGTTGGTTCAAAATTGGGATATCATA 57.163 30.769 4.83 0.00 0.00 2.15
3465 4114 8.695456 AGTTGGTTCAAAATTGGGATATCATAC 58.305 33.333 4.83 0.00 0.00 2.39
3466 4115 7.595819 TGGTTCAAAATTGGGATATCATACC 57.404 36.000 4.83 0.00 0.00 2.73
3467 4116 7.361438 TGGTTCAAAATTGGGATATCATACCT 58.639 34.615 4.83 0.00 32.98 3.08
3468 4117 8.506921 TGGTTCAAAATTGGGATATCATACCTA 58.493 33.333 4.83 0.00 32.98 3.08
3469 4118 9.014297 GGTTCAAAATTGGGATATCATACCTAG 57.986 37.037 4.83 0.00 32.98 3.02
3470 4119 9.014297 GTTCAAAATTGGGATATCATACCTAGG 57.986 37.037 7.41 7.41 32.98 3.02
3471 4120 8.287904 TCAAAATTGGGATATCATACCTAGGT 57.712 34.615 20.57 20.57 32.98 3.08
3472 4121 8.163408 TCAAAATTGGGATATCATACCTAGGTG 58.837 37.037 25.33 8.97 32.98 4.00
3473 4122 7.648177 AAATTGGGATATCATACCTAGGTGT 57.352 36.000 25.33 15.84 32.98 4.16
3474 4123 6.875972 ATTGGGATATCATACCTAGGTGTC 57.124 41.667 25.33 11.64 32.98 3.67
3475 4124 4.684724 TGGGATATCATACCTAGGTGTCC 58.315 47.826 25.33 18.65 32.98 4.02
3476 4125 4.360140 TGGGATATCATACCTAGGTGTCCT 59.640 45.833 25.33 9.48 37.71 3.85
3477 4126 5.162760 TGGGATATCATACCTAGGTGTCCTT 60.163 44.000 25.33 7.17 34.61 3.36
3478 4127 6.047479 TGGGATATCATACCTAGGTGTCCTTA 59.953 42.308 25.33 9.11 34.61 2.69
3479 4128 7.133483 GGGATATCATACCTAGGTGTCCTTAT 58.867 42.308 25.33 13.18 34.61 1.73
3480 4129 7.288158 GGGATATCATACCTAGGTGTCCTTATC 59.712 44.444 25.33 19.46 34.61 1.75
3481 4130 8.062536 GGATATCATACCTAGGTGTCCTTATCT 58.937 40.741 25.33 1.71 34.61 1.98
3485 4134 9.845214 ATCATACCTAGGTGTCCTTATCTATTT 57.155 33.333 25.33 0.00 34.61 1.40
3486 4135 9.670442 TCATACCTAGGTGTCCTTATCTATTTT 57.330 33.333 25.33 0.00 34.61 1.82
3509 4158 8.622948 TTTTAAAAAGTTGGTTCAACATTGGT 57.377 26.923 12.46 3.15 45.66 3.67
3510 4159 9.720769 TTTTAAAAAGTTGGTTCAACATTGGTA 57.279 25.926 12.46 2.38 45.66 3.25
3511 4160 9.892130 TTTAAAAAGTTGGTTCAACATTGGTAT 57.108 25.926 12.46 0.09 45.66 2.73
3512 4161 7.784633 AAAAAGTTGGTTCAACATTGGTATG 57.215 32.000 12.46 0.00 45.66 2.39
3513 4162 6.478512 AAAGTTGGTTCAACATTGGTATGT 57.521 33.333 12.46 0.00 45.66 2.29
3562 4211 7.905604 AAAGCACTTCTTATTAATTTTGGCC 57.094 32.000 0.00 0.00 33.88 5.36
3563 4212 5.977635 AGCACTTCTTATTAATTTTGGCCC 58.022 37.500 0.00 0.00 0.00 5.80
3564 4213 5.721480 AGCACTTCTTATTAATTTTGGCCCT 59.279 36.000 0.00 0.00 0.00 5.19
3565 4214 6.213397 AGCACTTCTTATTAATTTTGGCCCTT 59.787 34.615 0.00 0.00 0.00 3.95
3566 4215 7.398904 AGCACTTCTTATTAATTTTGGCCCTTA 59.601 33.333 0.00 0.00 0.00 2.69
3567 4216 8.204160 GCACTTCTTATTAATTTTGGCCCTTAT 58.796 33.333 0.00 0.00 0.00 1.73
3568 4217 9.750125 CACTTCTTATTAATTTTGGCCCTTATC 57.250 33.333 0.00 0.00 0.00 1.75
3569 4218 9.715119 ACTTCTTATTAATTTTGGCCCTTATCT 57.285 29.630 0.00 0.00 0.00 1.98
3615 4264 8.697507 AATCTGAAACTTTGGGATATCATACC 57.302 34.615 4.83 0.00 0.00 2.73
3616 4265 7.451731 TCTGAAACTTTGGGATATCATACCT 57.548 36.000 4.83 0.00 32.98 3.08
3617 4266 8.561536 TCTGAAACTTTGGGATATCATACCTA 57.438 34.615 4.83 0.00 32.98 3.08
3618 4267 8.651389 TCTGAAACTTTGGGATATCATACCTAG 58.349 37.037 4.83 2.28 32.98 3.02
3619 4268 7.745717 TGAAACTTTGGGATATCATACCTAGG 58.254 38.462 7.41 7.41 32.98 3.02
3620 4269 7.349859 TGAAACTTTGGGATATCATACCTAGGT 59.650 37.037 20.57 20.57 29.95 3.08
3621 4270 6.688073 ACTTTGGGATATCATACCTAGGTG 57.312 41.667 25.33 8.97 32.98 4.00
3622 4271 6.151049 ACTTTGGGATATCATACCTAGGTGT 58.849 40.000 25.33 15.84 32.98 4.16
3623 4272 6.270231 ACTTTGGGATATCATACCTAGGTGTC 59.730 42.308 25.33 11.64 32.98 3.67
3624 4273 4.684724 TGGGATATCATACCTAGGTGTCC 58.315 47.826 25.33 18.65 32.98 4.02
3625 4274 3.700038 GGGATATCATACCTAGGTGTCCG 59.300 52.174 25.33 7.17 0.00 4.79
3626 4275 4.342359 GGATATCATACCTAGGTGTCCGT 58.658 47.826 25.33 8.27 0.00 4.69
3627 4276 4.771054 GGATATCATACCTAGGTGTCCGTT 59.229 45.833 25.33 5.31 0.00 4.44
3628 4277 5.336531 GGATATCATACCTAGGTGTCCGTTG 60.337 48.000 25.33 11.58 0.00 4.10
3629 4278 2.811410 TCATACCTAGGTGTCCGTTGT 58.189 47.619 25.33 0.00 0.00 3.32
3630 4279 3.966979 TCATACCTAGGTGTCCGTTGTA 58.033 45.455 25.33 0.57 0.00 2.41
3631 4280 3.696051 TCATACCTAGGTGTCCGTTGTAC 59.304 47.826 25.33 0.00 0.00 2.90
3632 4281 1.999648 ACCTAGGTGTCCGTTGTACA 58.000 50.000 15.42 0.00 0.00 2.90
3633 4282 1.615392 ACCTAGGTGTCCGTTGTACAC 59.385 52.381 15.42 0.00 45.21 2.90
3636 4285 3.941035 GTGTCCGTTGTACACCCG 58.059 61.111 0.00 0.52 41.10 5.28
3637 4286 1.067916 GTGTCCGTTGTACACCCGT 59.932 57.895 11.81 0.00 41.10 5.28
3638 4287 1.067749 TGTCCGTTGTACACCCGTG 59.932 57.895 11.81 0.00 0.00 4.94
3639 4288 1.067916 GTCCGTTGTACACCCGTGT 59.932 57.895 5.69 5.69 46.87 4.49
3640 4289 0.530431 GTCCGTTGTACACCCGTGTT 60.530 55.000 5.69 0.00 41.83 3.32
3641 4290 0.249405 TCCGTTGTACACCCGTGTTC 60.249 55.000 5.69 1.60 41.83 3.18
3642 4291 0.530211 CCGTTGTACACCCGTGTTCA 60.530 55.000 5.69 4.47 41.83 3.18
3643 4292 1.504359 CGTTGTACACCCGTGTTCAT 58.496 50.000 5.69 0.00 41.83 2.57
3644 4293 1.868498 CGTTGTACACCCGTGTTCATT 59.132 47.619 5.69 0.00 41.83 2.57
3645 4294 2.288458 CGTTGTACACCCGTGTTCATTT 59.712 45.455 5.69 0.00 41.83 2.32
3646 4295 3.242804 CGTTGTACACCCGTGTTCATTTT 60.243 43.478 5.69 0.00 41.83 1.82
3647 4296 4.674475 GTTGTACACCCGTGTTCATTTTT 58.326 39.130 5.69 0.00 41.83 1.94
3648 4297 4.294416 TGTACACCCGTGTTCATTTTTG 57.706 40.909 5.69 0.00 41.83 2.44
3649 4298 3.695060 TGTACACCCGTGTTCATTTTTGT 59.305 39.130 5.69 0.00 41.83 2.83
3650 4299 3.157932 ACACCCGTGTTCATTTTTGTG 57.842 42.857 0.00 0.00 41.83 3.33
3651 4300 2.159170 ACACCCGTGTTCATTTTTGTGG 60.159 45.455 0.00 0.00 41.83 4.17
3652 4301 1.410882 ACCCGTGTTCATTTTTGTGGG 59.589 47.619 0.00 0.00 41.29 4.61
3653 4302 1.270041 CCCGTGTTCATTTTTGTGGGG 60.270 52.381 0.00 0.00 0.00 4.96
3654 4303 1.683917 CCGTGTTCATTTTTGTGGGGA 59.316 47.619 0.00 0.00 0.00 4.81
3655 4304 2.101582 CCGTGTTCATTTTTGTGGGGAA 59.898 45.455 0.00 0.00 0.00 3.97
3656 4305 3.244044 CCGTGTTCATTTTTGTGGGGAAT 60.244 43.478 0.00 0.00 0.00 3.01
3657 4306 3.740321 CGTGTTCATTTTTGTGGGGAATG 59.260 43.478 0.00 0.00 33.24 2.67
3658 4307 4.064388 GTGTTCATTTTTGTGGGGAATGG 58.936 43.478 0.00 0.00 32.91 3.16
3659 4308 3.072184 TGTTCATTTTTGTGGGGAATGGG 59.928 43.478 0.00 0.00 32.91 4.00
3660 4309 2.983296 TCATTTTTGTGGGGAATGGGT 58.017 42.857 0.00 0.00 32.91 4.51
3661 4310 2.636893 TCATTTTTGTGGGGAATGGGTG 59.363 45.455 0.00 0.00 32.91 4.61
3662 4311 0.761802 TTTTTGTGGGGAATGGGTGC 59.238 50.000 0.00 0.00 0.00 5.01
3663 4312 1.124477 TTTTGTGGGGAATGGGTGCC 61.124 55.000 0.00 0.00 36.87 5.01
3664 4313 3.877344 TTGTGGGGAATGGGTGCCG 62.877 63.158 0.00 0.00 39.07 5.69
3669 4318 4.360405 GGAATGGGTGCCGGTGGT 62.360 66.667 1.90 0.00 0.00 4.16
3670 4319 2.672295 GAATGGGTGCCGGTGGTA 59.328 61.111 1.90 0.00 0.00 3.25
3671 4320 1.226262 GAATGGGTGCCGGTGGTAT 59.774 57.895 1.90 0.00 0.00 2.73
3672 4321 0.818040 GAATGGGTGCCGGTGGTATC 60.818 60.000 1.90 0.00 0.00 2.24
3673 4322 2.279037 AATGGGTGCCGGTGGTATCC 62.279 60.000 1.90 0.00 39.12 2.59
3674 4323 3.404438 GGGTGCCGGTGGTATCCA 61.404 66.667 1.90 0.00 38.50 3.41
3684 4333 3.081048 TGGTATCCACAGTGCTGGA 57.919 52.632 14.32 14.32 44.72 3.86
3685 4334 1.357137 TGGTATCCACAGTGCTGGAA 58.643 50.000 15.48 5.87 43.79 3.53
3686 4335 1.915489 TGGTATCCACAGTGCTGGAAT 59.085 47.619 15.48 8.96 43.79 3.01
3687 4336 2.308570 TGGTATCCACAGTGCTGGAATT 59.691 45.455 15.48 6.03 43.79 2.17
3688 4337 3.521531 TGGTATCCACAGTGCTGGAATTA 59.478 43.478 15.48 5.27 43.79 1.40
3689 4338 4.165950 TGGTATCCACAGTGCTGGAATTAT 59.834 41.667 15.48 5.21 43.79 1.28
3690 4339 4.516698 GGTATCCACAGTGCTGGAATTATG 59.483 45.833 15.48 0.00 43.79 1.90
3691 4340 3.003394 TCCACAGTGCTGGAATTATGG 57.997 47.619 10.80 1.64 37.39 2.74
3692 4341 2.308570 TCCACAGTGCTGGAATTATGGT 59.691 45.455 10.80 0.00 37.39 3.55
3693 4342 3.091545 CCACAGTGCTGGAATTATGGTT 58.908 45.455 4.11 0.00 32.30 3.67
3694 4343 3.129287 CCACAGTGCTGGAATTATGGTTC 59.871 47.826 4.11 0.00 32.30 3.62
3695 4344 3.758023 CACAGTGCTGGAATTATGGTTCA 59.242 43.478 4.11 0.00 34.19 3.18
3696 4345 4.218200 CACAGTGCTGGAATTATGGTTCAA 59.782 41.667 4.11 0.00 34.19 2.69
3697 4346 4.218417 ACAGTGCTGGAATTATGGTTCAAC 59.782 41.667 4.11 0.00 34.19 3.18
3698 4347 4.218200 CAGTGCTGGAATTATGGTTCAACA 59.782 41.667 0.00 0.00 0.00 3.33
3699 4348 5.018809 AGTGCTGGAATTATGGTTCAACAT 58.981 37.500 0.00 0.00 34.90 2.71
3700 4349 6.095300 CAGTGCTGGAATTATGGTTCAACATA 59.905 38.462 0.00 0.00 32.39 2.29
3701 4350 6.095440 AGTGCTGGAATTATGGTTCAACATAC 59.905 38.462 0.00 0.00 33.33 2.39
3702 4351 5.065859 TGCTGGAATTATGGTTCAACATACG 59.934 40.000 0.00 0.00 33.33 3.06
3703 4352 5.295787 GCTGGAATTATGGTTCAACATACGA 59.704 40.000 0.00 0.00 33.33 3.43
3704 4353 6.017109 GCTGGAATTATGGTTCAACATACGAT 60.017 38.462 0.00 0.00 33.33 3.73
3705 4354 7.172532 GCTGGAATTATGGTTCAACATACGATA 59.827 37.037 0.00 0.00 33.33 2.92
3706 4355 8.373048 TGGAATTATGGTTCAACATACGATAC 57.627 34.615 0.00 0.00 33.33 2.24
3707 4356 7.988028 TGGAATTATGGTTCAACATACGATACA 59.012 33.333 0.00 0.00 33.33 2.29
3708 4357 8.999431 GGAATTATGGTTCAACATACGATACAT 58.001 33.333 0.00 0.00 33.33 2.29
3710 4359 9.778741 AATTATGGTTCAACATACGATACATCT 57.221 29.630 0.00 0.00 33.33 2.90
3714 4363 9.778741 ATGGTTCAACATACGATACATCTAATT 57.221 29.630 0.00 0.00 0.00 1.40
3715 4364 9.607988 TGGTTCAACATACGATACATCTAATTT 57.392 29.630 0.00 0.00 0.00 1.82
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
46 55 2.831333 AGAAGATAACAGAGCATGCCG 58.169 47.619 15.66 5.90 0.00 5.69
68 77 5.813513 AAAATCATCAGGCCAAGAAAAGT 57.186 34.783 5.01 0.00 0.00 2.66
122 143 3.432252 GGTCGAACACTGTAATTCACTGG 59.568 47.826 0.00 0.00 0.00 4.00
202 238 2.942376 TCCAGCCATGCTAAACAATACG 59.058 45.455 0.00 0.00 36.40 3.06
229 276 2.146724 CCTGGTGAGTGGTGACCCA 61.147 63.158 0.00 0.00 38.87 4.51
341 391 6.129874 TGTCTCTGCACAGGTATCTTATACT 58.870 40.000 0.00 0.00 0.00 2.12
362 798 8.611757 AGGCTTGTTCAAATTTTGTATTTTGTC 58.388 29.630 8.89 0.00 35.01 3.18
454 890 4.524749 CAGCATCATTCTGACAATAAGCG 58.475 43.478 0.00 0.00 33.54 4.68
561 1001 8.012241 CACTCACAAAACTAGAGCATAAGAAAC 58.988 37.037 0.00 0.00 32.71 2.78
636 1078 3.883489 CCCATATCATCATGGCATAGCTG 59.117 47.826 0.00 0.00 43.63 4.24
658 1100 2.589720 TGATTCACATGATGATGCCCC 58.410 47.619 0.00 0.00 37.11 5.80
676 1118 6.486320 ACATGGATCACGCAAAATACATATGA 59.514 34.615 10.38 0.00 0.00 2.15
794 1300 7.535139 TGCTAATCAACCATAAAGCAGTAAAC 58.465 34.615 0.00 0.00 35.20 2.01
830 1336 2.993899 CAGTACCACTAAGGCGTGAAAG 59.006 50.000 0.00 0.00 43.14 2.62
922 1429 4.882427 CCAAGAAATCTGATGTGAGCTGAT 59.118 41.667 0.00 0.00 0.00 2.90
933 1440 5.319453 AGCTGTGAATTCCAAGAAATCTGA 58.681 37.500 2.27 0.00 0.00 3.27
998 1512 2.108514 ATCAACGTGGCAGGCATCG 61.109 57.895 7.17 14.47 0.00 3.84
1049 1563 4.680537 AGTGTCGGAGGGCGGTCT 62.681 66.667 0.00 0.00 0.00 3.85
1307 1821 4.560108 CGGCAAACAGTACAGGTACTTAGT 60.560 45.833 9.31 3.47 43.35 2.24
1313 1827 2.366266 AGAACGGCAAACAGTACAGGTA 59.634 45.455 0.00 0.00 0.00 3.08
1326 1840 1.371183 CACCTGGAGAAGAACGGCA 59.629 57.895 0.00 0.00 0.00 5.69
1470 1984 4.936891 TGTGCAGTCTACTACATATGCAG 58.063 43.478 1.58 1.32 43.64 4.41
1478 1992 3.318017 CCACAGTTGTGCAGTCTACTAC 58.682 50.000 6.74 0.00 44.34 2.73
1490 2088 2.760092 ACAACAATCAAGCCACAGTTGT 59.240 40.909 0.00 0.00 43.11 3.32
1545 2143 2.063979 TGGTCGCCCATCACCCTAG 61.064 63.158 0.00 0.00 35.17 3.02
1546 2144 2.039787 TGGTCGCCCATCACCCTA 59.960 61.111 0.00 0.00 35.17 3.53
1607 2205 8.601476 CCTGGTACACTTCTTCGAAATAATTAC 58.399 37.037 0.00 0.00 0.00 1.89
1626 2224 2.361438 CCGGTCTTGAGATACCTGGTAC 59.639 54.545 9.09 3.67 33.34 3.34
1629 2227 0.105039 GCCGGTCTTGAGATACCTGG 59.895 60.000 1.90 0.00 34.55 4.45
1649 2247 3.373439 CAGCAGAGTCCAGAATAAGCAAC 59.627 47.826 0.00 0.00 0.00 4.17
1653 2251 3.540314 AGCAGCAGAGTCCAGAATAAG 57.460 47.619 0.00 0.00 0.00 1.73
1656 2254 1.350351 ACAAGCAGCAGAGTCCAGAAT 59.650 47.619 0.00 0.00 0.00 2.40
1864 2463 3.118261 GGTCATACAAGAGCCTCAATGGA 60.118 47.826 0.00 0.00 38.35 3.41
1873 2472 7.934120 ACAGATTAATTAGGGTCATACAAGAGC 59.066 37.037 0.00 0.00 35.36 4.09
2093 2692 3.572255 GGACAACCCAAGAACATTTAGCA 59.428 43.478 0.00 0.00 34.14 3.49
2102 2701 2.024846 TCAAACCTGGACAACCCAAGAA 60.025 45.455 0.00 0.00 46.07 2.52
2108 2707 0.603065 GGCATCAAACCTGGACAACC 59.397 55.000 0.00 0.00 0.00 3.77
2110 2709 2.299582 CAATGGCATCAAACCTGGACAA 59.700 45.455 0.00 0.00 0.00 3.18
2133 2732 5.083821 TCATATCCAACCTCCGATGATACA 58.916 41.667 0.00 0.00 0.00 2.29
2275 2875 3.923017 AAGCATTACCTTCAGCACAAC 57.077 42.857 0.00 0.00 0.00 3.32
2291 2891 1.891919 GTGGGTGTCGCTCAAAGCA 60.892 57.895 0.00 0.00 42.58 3.91
2292 2892 1.444119 TTGTGGGTGTCGCTCAAAGC 61.444 55.000 0.00 0.00 38.02 3.51
2324 2926 5.701290 AGTTCTAATAAGCACACTGTGAACC 59.299 40.000 15.86 2.08 35.23 3.62
2326 2928 9.502091 AATTAGTTCTAATAAGCACACTGTGAA 57.498 29.630 15.86 0.00 35.23 3.18
2327 2929 9.502091 AAATTAGTTCTAATAAGCACACTGTGA 57.498 29.630 15.86 0.00 35.23 3.58
2499 3104 3.492337 GGGGAAGAAACCACAATGTACA 58.508 45.455 0.00 0.00 32.85 2.90
2500 3105 2.486592 CGGGGAAGAAACCACAATGTAC 59.513 50.000 0.00 0.00 31.94 2.90
2602 3207 5.594317 AGCCACCAAACCAGATATTCAATAC 59.406 40.000 0.00 0.00 0.00 1.89
2619 3224 2.848679 TCAGCCAGTCAGCCACCA 60.849 61.111 0.00 0.00 0.00 4.17
2636 3241 7.334844 TCGACATCAGTAATAATCAGTCAGT 57.665 36.000 0.00 0.00 0.00 3.41
2661 3266 2.647299 TCTCCCCACAGCCTAAAAATGA 59.353 45.455 0.00 0.00 0.00 2.57
2712 3317 2.284263 GCCTTTTGCTACAATCCTGC 57.716 50.000 0.00 0.00 36.87 4.85
2759 3364 1.806542 GAGCGAATCAGGCAAACAGAA 59.193 47.619 0.00 0.00 0.00 3.02
2777 3382 2.363359 GGCCCCTTAGCAATCAAATGAG 59.637 50.000 0.00 0.00 0.00 2.90
2811 3416 8.902806 AGAAACAGATATATTTGGCGAAATCAA 58.097 29.630 10.18 0.72 33.63 2.57
2818 3423 4.377431 GCGGAGAAACAGATATATTTGGCG 60.377 45.833 8.04 0.00 0.00 5.69
2845 3450 2.623878 TTACAAGGACGCCAACAGAA 57.376 45.000 0.00 0.00 0.00 3.02
2853 3458 5.107133 TCTTAGCACTTATTACAAGGACGC 58.893 41.667 0.00 0.00 0.00 5.19
2890 3495 4.637483 AGTATTTGCACATGTACCATGC 57.363 40.909 0.00 0.00 39.88 4.06
2892 3497 6.207691 GGAAAGTATTTGCACATGTACCAT 57.792 37.500 0.00 0.00 46.44 3.55
3037 3667 4.309933 TCAGTCTTGACAACACTAGCATG 58.690 43.478 3.49 0.00 0.00 4.06
3070 3703 4.621068 AACATTTGTGGCTGTCGATATG 57.379 40.909 0.00 0.00 0.00 1.78
3072 3705 4.793071 CAAAACATTTGTGGCTGTCGATA 58.207 39.130 0.00 0.00 0.00 2.92
3115 3762 1.721389 CTTGTCTTGTGATGGACGTCG 59.279 52.381 9.92 0.00 35.45 5.12
3117 3764 2.365617 ACTCTTGTCTTGTGATGGACGT 59.634 45.455 0.00 0.00 35.45 4.34
3119 3766 5.784177 TCTTACTCTTGTCTTGTGATGGAC 58.216 41.667 0.00 0.00 0.00 4.02
3138 3786 4.292186 AGCAATTGCCTTGAGTCTCTTA 57.708 40.909 26.45 0.00 43.38 2.10
3143 3791 2.094854 CCTCAAGCAATTGCCTTGAGTC 60.095 50.000 36.96 15.25 44.80 3.36
3165 3814 0.455815 GCCCCTAAAATTCTGTGCGG 59.544 55.000 0.00 0.00 0.00 5.69
3166 3815 1.463674 AGCCCCTAAAATTCTGTGCG 58.536 50.000 0.00 0.00 0.00 5.34
3167 3816 3.352648 TGTAGCCCCTAAAATTCTGTGC 58.647 45.455 0.00 0.00 0.00 4.57
3168 3817 6.332630 CAAATGTAGCCCCTAAAATTCTGTG 58.667 40.000 0.00 0.00 0.00 3.66
3169 3818 5.422012 CCAAATGTAGCCCCTAAAATTCTGT 59.578 40.000 0.00 0.00 0.00 3.41
3170 3819 5.422012 ACCAAATGTAGCCCCTAAAATTCTG 59.578 40.000 0.00 0.00 0.00 3.02
3171 3820 5.589831 ACCAAATGTAGCCCCTAAAATTCT 58.410 37.500 0.00 0.00 0.00 2.40
3172 3821 5.932619 ACCAAATGTAGCCCCTAAAATTC 57.067 39.130 0.00 0.00 0.00 2.17
3173 3822 6.296202 GGAAACCAAATGTAGCCCCTAAAATT 60.296 38.462 0.00 0.00 0.00 1.82
3174 3823 5.188948 GGAAACCAAATGTAGCCCCTAAAAT 59.811 40.000 0.00 0.00 0.00 1.82
3175 3824 4.528987 GGAAACCAAATGTAGCCCCTAAAA 59.471 41.667 0.00 0.00 0.00 1.52
3176 3825 4.090819 GGAAACCAAATGTAGCCCCTAAA 58.909 43.478 0.00 0.00 0.00 1.85
3177 3826 3.076182 TGGAAACCAAATGTAGCCCCTAA 59.924 43.478 0.00 0.00 0.00 2.69
3178 3827 2.650322 TGGAAACCAAATGTAGCCCCTA 59.350 45.455 0.00 0.00 0.00 3.53
3179 3828 1.431243 TGGAAACCAAATGTAGCCCCT 59.569 47.619 0.00 0.00 0.00 4.79
3180 3829 1.548719 GTGGAAACCAAATGTAGCCCC 59.451 52.381 0.00 0.00 34.18 5.80
3181 3830 1.201414 CGTGGAAACCAAATGTAGCCC 59.799 52.381 0.00 0.00 34.18 5.19
3182 3831 1.201414 CCGTGGAAACCAAATGTAGCC 59.799 52.381 0.00 0.00 34.18 3.93
3183 3832 2.156098 TCCGTGGAAACCAAATGTAGC 58.844 47.619 0.00 0.00 34.18 3.58
3184 3833 3.435671 GTCTCCGTGGAAACCAAATGTAG 59.564 47.826 0.00 0.00 34.18 2.74
3185 3834 3.071892 AGTCTCCGTGGAAACCAAATGTA 59.928 43.478 0.00 0.00 34.18 2.29
3186 3835 2.158667 AGTCTCCGTGGAAACCAAATGT 60.159 45.455 0.00 0.00 34.18 2.71
3187 3836 2.504367 AGTCTCCGTGGAAACCAAATG 58.496 47.619 0.00 0.00 34.18 2.32
3188 3837 2.951229 AGTCTCCGTGGAAACCAAAT 57.049 45.000 0.00 0.00 34.18 2.32
3189 3838 2.685897 CAAAGTCTCCGTGGAAACCAAA 59.314 45.455 0.00 0.00 34.18 3.28
3190 3839 2.294074 CAAAGTCTCCGTGGAAACCAA 58.706 47.619 0.00 0.00 34.18 3.67
3191 3840 1.476110 CCAAAGTCTCCGTGGAAACCA 60.476 52.381 0.00 0.00 34.05 3.67
3192 3841 1.202722 TCCAAAGTCTCCGTGGAAACC 60.203 52.381 0.00 0.00 38.50 3.27
3193 3842 2.249844 TCCAAAGTCTCCGTGGAAAC 57.750 50.000 0.00 0.00 38.50 2.78
3195 3844 2.043992 TCTTCCAAAGTCTCCGTGGAA 58.956 47.619 10.59 10.59 46.66 3.53
3196 3845 1.712056 TCTTCCAAAGTCTCCGTGGA 58.288 50.000 0.00 0.00 39.70 4.02
3197 3846 2.234908 AGATCTTCCAAAGTCTCCGTGG 59.765 50.000 0.00 0.00 0.00 4.94
3198 3847 3.516615 GAGATCTTCCAAAGTCTCCGTG 58.483 50.000 0.00 0.00 33.45 4.94
3199 3848 2.498078 GGAGATCTTCCAAAGTCTCCGT 59.502 50.000 15.85 0.00 46.01 4.69
3200 3849 3.172229 GGAGATCTTCCAAAGTCTCCG 57.828 52.381 15.85 0.00 46.01 4.63
3215 3864 1.976404 ACAGATGGCGATCATGGAGAT 59.024 47.619 11.55 0.00 40.48 2.75
3216 3865 1.069668 CACAGATGGCGATCATGGAGA 59.930 52.381 11.55 0.00 35.97 3.71
3217 3866 1.509703 CACAGATGGCGATCATGGAG 58.490 55.000 11.55 0.00 35.97 3.86
3218 3867 0.533531 GCACAGATGGCGATCATGGA 60.534 55.000 11.55 0.00 35.97 3.41
3219 3868 0.534427 AGCACAGATGGCGATCATGG 60.534 55.000 11.55 2.84 35.97 3.66
3220 3869 0.866427 GAGCACAGATGGCGATCATG 59.134 55.000 11.55 9.62 35.97 3.07
3221 3870 0.250209 GGAGCACAGATGGCGATCAT 60.250 55.000 11.55 0.00 39.13 2.45
3222 3871 1.144716 GGAGCACAGATGGCGATCA 59.855 57.895 11.55 0.00 36.08 2.92
3223 3872 0.879400 CAGGAGCACAGATGGCGATC 60.879 60.000 0.00 0.00 36.08 3.69
3224 3873 1.145598 CAGGAGCACAGATGGCGAT 59.854 57.895 0.00 0.00 36.08 4.58
3225 3874 2.580815 CAGGAGCACAGATGGCGA 59.419 61.111 0.00 0.00 36.08 5.54
3226 3875 2.513204 CCAGGAGCACAGATGGCG 60.513 66.667 0.00 0.00 36.08 5.69
3227 3876 2.124403 CCCAGGAGCACAGATGGC 60.124 66.667 0.00 0.00 0.00 4.40
3228 3877 1.077930 CACCCAGGAGCACAGATGG 60.078 63.158 0.00 0.00 0.00 3.51
3229 3878 1.748122 GCACCCAGGAGCACAGATG 60.748 63.158 0.83 0.00 0.00 2.90
3230 3879 2.673523 GCACCCAGGAGCACAGAT 59.326 61.111 0.83 0.00 0.00 2.90
3231 3880 2.746947 TAGGCACCCAGGAGCACAGA 62.747 60.000 8.40 0.00 33.44 3.41
3232 3881 1.841302 TTAGGCACCCAGGAGCACAG 61.841 60.000 8.40 0.00 33.44 3.66
3233 3882 1.422977 TTTAGGCACCCAGGAGCACA 61.423 55.000 8.40 0.00 33.44 4.57
3234 3883 0.960861 GTTTAGGCACCCAGGAGCAC 60.961 60.000 8.40 0.00 33.44 4.40
3235 3884 1.378762 GTTTAGGCACCCAGGAGCA 59.621 57.895 8.40 0.00 33.44 4.26
3236 3885 0.034089 ATGTTTAGGCACCCAGGAGC 60.034 55.000 0.00 0.00 0.00 4.70
3237 3886 1.281867 TGATGTTTAGGCACCCAGGAG 59.718 52.381 0.00 0.00 0.00 3.69
3238 3887 1.281867 CTGATGTTTAGGCACCCAGGA 59.718 52.381 0.00 0.00 0.00 3.86
3239 3888 1.755179 CTGATGTTTAGGCACCCAGG 58.245 55.000 0.00 0.00 0.00 4.45
3240 3889 1.098050 GCTGATGTTTAGGCACCCAG 58.902 55.000 0.00 0.00 0.00 4.45
3241 3890 0.403655 TGCTGATGTTTAGGCACCCA 59.596 50.000 0.00 0.00 0.00 4.51
3242 3891 1.098050 CTGCTGATGTTTAGGCACCC 58.902 55.000 0.00 0.00 0.00 4.61
3243 3892 0.453390 GCTGCTGATGTTTAGGCACC 59.547 55.000 0.00 0.00 0.00 5.01
3244 3893 1.167851 TGCTGCTGATGTTTAGGCAC 58.832 50.000 0.00 0.00 0.00 5.01
3245 3894 1.908344 TTGCTGCTGATGTTTAGGCA 58.092 45.000 0.00 0.00 0.00 4.75
3246 3895 4.843220 ATATTGCTGCTGATGTTTAGGC 57.157 40.909 0.00 0.00 0.00 3.93
3247 3896 7.459394 CAAAATATTGCTGCTGATGTTTAGG 57.541 36.000 0.00 0.24 0.00 2.69
3262 3911 9.333497 CGTATAGAATGATGGTGCAAAATATTG 57.667 33.333 0.00 0.00 39.65 1.90
3263 3912 8.023128 GCGTATAGAATGATGGTGCAAAATATT 58.977 33.333 0.00 0.00 0.00 1.28
3264 3913 7.174772 TGCGTATAGAATGATGGTGCAAAATAT 59.825 33.333 0.00 0.00 0.00 1.28
3265 3914 6.484977 TGCGTATAGAATGATGGTGCAAAATA 59.515 34.615 0.00 0.00 0.00 1.40
3266 3915 5.299028 TGCGTATAGAATGATGGTGCAAAAT 59.701 36.000 0.00 0.00 0.00 1.82
3267 3916 4.637977 TGCGTATAGAATGATGGTGCAAAA 59.362 37.500 0.00 0.00 0.00 2.44
3268 3917 4.195416 TGCGTATAGAATGATGGTGCAAA 58.805 39.130 0.00 0.00 0.00 3.68
3269 3918 3.802866 TGCGTATAGAATGATGGTGCAA 58.197 40.909 0.00 0.00 0.00 4.08
3270 3919 3.392882 CTGCGTATAGAATGATGGTGCA 58.607 45.455 0.00 0.00 0.00 4.57
3271 3920 2.738846 CCTGCGTATAGAATGATGGTGC 59.261 50.000 0.00 0.00 0.00 5.01
3272 3921 3.006859 TCCCTGCGTATAGAATGATGGTG 59.993 47.826 0.00 0.00 0.00 4.17
3273 3922 3.239449 TCCCTGCGTATAGAATGATGGT 58.761 45.455 0.00 0.00 0.00 3.55
3274 3923 3.368843 CCTCCCTGCGTATAGAATGATGG 60.369 52.174 0.00 0.00 0.00 3.51
3275 3924 3.511540 TCCTCCCTGCGTATAGAATGATG 59.488 47.826 0.00 0.00 0.00 3.07
3276 3925 3.511934 GTCCTCCCTGCGTATAGAATGAT 59.488 47.826 0.00 0.00 0.00 2.45
3277 3926 2.891580 GTCCTCCCTGCGTATAGAATGA 59.108 50.000 0.00 0.00 0.00 2.57
3278 3927 2.628178 TGTCCTCCCTGCGTATAGAATG 59.372 50.000 0.00 0.00 0.00 2.67
3279 3928 2.958818 TGTCCTCCCTGCGTATAGAAT 58.041 47.619 0.00 0.00 0.00 2.40
3280 3929 2.447408 TGTCCTCCCTGCGTATAGAA 57.553 50.000 0.00 0.00 0.00 2.10
3281 3930 2.429610 GTTTGTCCTCCCTGCGTATAGA 59.570 50.000 0.00 0.00 0.00 1.98
3282 3931 2.167693 TGTTTGTCCTCCCTGCGTATAG 59.832 50.000 0.00 0.00 0.00 1.31
3283 3932 2.181125 TGTTTGTCCTCCCTGCGTATA 58.819 47.619 0.00 0.00 0.00 1.47
3284 3933 0.981183 TGTTTGTCCTCCCTGCGTAT 59.019 50.000 0.00 0.00 0.00 3.06
3285 3934 0.981183 ATGTTTGTCCTCCCTGCGTA 59.019 50.000 0.00 0.00 0.00 4.42
3286 3935 0.110486 AATGTTTGTCCTCCCTGCGT 59.890 50.000 0.00 0.00 0.00 5.24
3287 3936 2.107950 TAATGTTTGTCCTCCCTGCG 57.892 50.000 0.00 0.00 0.00 5.18
3288 3937 6.651225 GTCTATATAATGTTTGTCCTCCCTGC 59.349 42.308 0.00 0.00 0.00 4.85
3289 3938 7.162082 GGTCTATATAATGTTTGTCCTCCCTG 58.838 42.308 0.00 0.00 0.00 4.45
3290 3939 6.849697 TGGTCTATATAATGTTTGTCCTCCCT 59.150 38.462 0.00 0.00 0.00 4.20
3291 3940 7.016268 TCTGGTCTATATAATGTTTGTCCTCCC 59.984 40.741 0.00 0.00 0.00 4.30
3292 3941 7.963532 TCTGGTCTATATAATGTTTGTCCTCC 58.036 38.462 0.00 0.00 0.00 4.30
3293 3942 9.429359 CATCTGGTCTATATAATGTTTGTCCTC 57.571 37.037 0.00 0.00 0.00 3.71
3294 3943 7.880195 GCATCTGGTCTATATAATGTTTGTCCT 59.120 37.037 0.00 0.00 0.00 3.85
3295 3944 7.119846 GGCATCTGGTCTATATAATGTTTGTCC 59.880 40.741 0.00 0.00 0.00 4.02
3296 3945 7.661437 TGGCATCTGGTCTATATAATGTTTGTC 59.339 37.037 0.00 0.00 0.00 3.18
3297 3946 7.517320 TGGCATCTGGTCTATATAATGTTTGT 58.483 34.615 0.00 0.00 0.00 2.83
3298 3947 7.984422 TGGCATCTGGTCTATATAATGTTTG 57.016 36.000 0.00 0.00 0.00 2.93
3299 3948 7.998383 TGTTGGCATCTGGTCTATATAATGTTT 59.002 33.333 0.00 0.00 0.00 2.83
3300 3949 7.445402 GTGTTGGCATCTGGTCTATATAATGTT 59.555 37.037 0.00 0.00 0.00 2.71
3301 3950 6.936900 GTGTTGGCATCTGGTCTATATAATGT 59.063 38.462 0.00 0.00 0.00 2.71
3302 3951 6.936335 TGTGTTGGCATCTGGTCTATATAATG 59.064 38.462 0.00 0.00 0.00 1.90
3303 3952 7.078249 TGTGTTGGCATCTGGTCTATATAAT 57.922 36.000 0.00 0.00 0.00 1.28
3304 3953 6.493189 TGTGTTGGCATCTGGTCTATATAA 57.507 37.500 0.00 0.00 0.00 0.98
3305 3954 5.511373 GCTGTGTTGGCATCTGGTCTATATA 60.511 44.000 0.00 0.00 0.00 0.86
3306 3955 4.744867 GCTGTGTTGGCATCTGGTCTATAT 60.745 45.833 0.00 0.00 0.00 0.86
3307 3956 3.432186 GCTGTGTTGGCATCTGGTCTATA 60.432 47.826 0.00 0.00 0.00 1.31
3308 3957 2.681976 GCTGTGTTGGCATCTGGTCTAT 60.682 50.000 0.00 0.00 0.00 1.98
3309 3958 1.339055 GCTGTGTTGGCATCTGGTCTA 60.339 52.381 0.00 0.00 0.00 2.59
3310 3959 0.607489 GCTGTGTTGGCATCTGGTCT 60.607 55.000 0.00 0.00 0.00 3.85
3311 3960 1.589716 GGCTGTGTTGGCATCTGGTC 61.590 60.000 0.00 0.00 0.00 4.02
3312 3961 1.604593 GGCTGTGTTGGCATCTGGT 60.605 57.895 0.00 0.00 0.00 4.00
3313 3962 2.345760 GGGCTGTGTTGGCATCTGG 61.346 63.158 0.00 0.00 0.00 3.86
3314 3963 1.303888 AGGGCTGTGTTGGCATCTG 60.304 57.895 0.00 0.00 0.00 2.90
3315 3964 1.303888 CAGGGCTGTGTTGGCATCT 60.304 57.895 0.00 0.00 0.00 2.90
3316 3965 1.303561 TCAGGGCTGTGTTGGCATC 60.304 57.895 0.00 0.00 0.00 3.91
3317 3966 1.604593 GTCAGGGCTGTGTTGGCAT 60.605 57.895 0.00 0.00 0.00 4.40
3318 3967 2.203337 GTCAGGGCTGTGTTGGCA 60.203 61.111 0.00 0.00 0.00 4.92
3319 3968 3.357079 CGTCAGGGCTGTGTTGGC 61.357 66.667 0.00 0.00 0.00 4.52
3320 3969 1.961277 GACGTCAGGGCTGTGTTGG 60.961 63.158 11.55 0.00 0.00 3.77
3321 3970 2.310233 CGACGTCAGGGCTGTGTTG 61.310 63.158 17.16 0.00 0.00 3.33
3322 3971 2.029073 CGACGTCAGGGCTGTGTT 59.971 61.111 17.16 0.00 0.00 3.32
3323 3972 3.224324 ACGACGTCAGGGCTGTGT 61.224 61.111 17.16 0.00 0.00 3.72
3324 3973 2.734723 CACGACGTCAGGGCTGTG 60.735 66.667 17.16 10.30 0.00 3.66
3325 3974 3.991051 CCACGACGTCAGGGCTGT 61.991 66.667 17.16 0.58 0.00 4.40
3326 3975 2.989055 AAACCACGACGTCAGGGCTG 62.989 60.000 23.30 6.65 0.00 4.85
3327 3976 2.319890 AAAACCACGACGTCAGGGCT 62.320 55.000 23.30 10.12 0.00 5.19
3328 3977 0.600782 TAAAACCACGACGTCAGGGC 60.601 55.000 23.30 0.00 0.00 5.19
3329 3978 1.142474 GTAAAACCACGACGTCAGGG 58.858 55.000 23.30 20.84 0.00 4.45
3330 3979 0.780002 CGTAAAACCACGACGTCAGG 59.220 55.000 17.16 18.42 44.69 3.86
3331 3980 0.160182 GCGTAAAACCACGACGTCAG 59.840 55.000 17.16 10.90 44.69 3.51
3332 3981 0.527169 TGCGTAAAACCACGACGTCA 60.527 50.000 17.16 0.00 44.69 4.35
3333 3982 0.111574 GTGCGTAAAACCACGACGTC 60.112 55.000 5.18 5.18 44.69 4.34
3334 3983 0.805322 TGTGCGTAAAACCACGACGT 60.805 50.000 0.00 0.00 44.69 4.34
3335 3984 0.301088 TTGTGCGTAAAACCACGACG 59.699 50.000 0.00 0.00 44.69 5.12
3336 3985 1.593933 TCTTGTGCGTAAAACCACGAC 59.406 47.619 0.00 0.00 44.69 4.34
3337 3986 1.937278 TCTTGTGCGTAAAACCACGA 58.063 45.000 0.00 0.00 44.69 4.35
3338 3987 2.961522 ATCTTGTGCGTAAAACCACG 57.038 45.000 0.00 0.00 44.71 4.94
3339 3988 7.042321 TGCTATATATCTTGTGCGTAAAACCAC 60.042 37.037 0.00 0.00 0.00 4.16
3340 3989 6.987404 TGCTATATATCTTGTGCGTAAAACCA 59.013 34.615 0.00 0.00 0.00 3.67
3341 3990 7.416154 TGCTATATATCTTGTGCGTAAAACC 57.584 36.000 0.00 0.00 0.00 3.27
3342 3991 7.893236 CGATGCTATATATCTTGTGCGTAAAAC 59.107 37.037 0.00 0.00 0.00 2.43
3343 3992 7.062956 CCGATGCTATATATCTTGTGCGTAAAA 59.937 37.037 0.00 0.00 0.00 1.52
3344 3993 6.530181 CCGATGCTATATATCTTGTGCGTAAA 59.470 38.462 0.00 0.00 0.00 2.01
3345 3994 6.033966 CCGATGCTATATATCTTGTGCGTAA 58.966 40.000 0.00 0.00 0.00 3.18
3346 3995 5.578776 CCGATGCTATATATCTTGTGCGTA 58.421 41.667 0.00 0.00 0.00 4.42
3347 3996 4.424626 CCGATGCTATATATCTTGTGCGT 58.575 43.478 0.00 0.00 0.00 5.24
3348 3997 3.243877 GCCGATGCTATATATCTTGTGCG 59.756 47.826 0.00 0.00 33.53 5.34
3349 3998 4.183865 TGCCGATGCTATATATCTTGTGC 58.816 43.478 0.00 0.00 38.71 4.57
3350 3999 6.044682 TGATGCCGATGCTATATATCTTGTG 58.955 40.000 0.00 0.00 38.71 3.33
3351 4000 6.225981 TGATGCCGATGCTATATATCTTGT 57.774 37.500 0.00 0.00 38.71 3.16
3352 4001 5.177142 GCTGATGCCGATGCTATATATCTTG 59.823 44.000 0.00 0.00 38.71 3.02
3353 4002 5.163374 TGCTGATGCCGATGCTATATATCTT 60.163 40.000 0.00 0.00 38.71 2.40
3354 4003 4.343239 TGCTGATGCCGATGCTATATATCT 59.657 41.667 0.00 0.00 38.71 1.98
3355 4004 4.625028 TGCTGATGCCGATGCTATATATC 58.375 43.478 0.00 0.00 38.71 1.63
3356 4005 4.502777 CCTGCTGATGCCGATGCTATATAT 60.503 45.833 0.00 0.00 38.71 0.86
3357 4006 3.181472 CCTGCTGATGCCGATGCTATATA 60.181 47.826 0.00 0.00 38.71 0.86
3358 4007 2.419713 CCTGCTGATGCCGATGCTATAT 60.420 50.000 0.00 0.00 38.71 0.86
3359 4008 1.066645 CCTGCTGATGCCGATGCTATA 60.067 52.381 0.00 0.00 38.71 1.31
3360 4009 0.321387 CCTGCTGATGCCGATGCTAT 60.321 55.000 0.00 0.00 38.71 2.97
3361 4010 1.070275 CCTGCTGATGCCGATGCTA 59.930 57.895 0.00 0.00 38.71 3.49
3362 4011 2.203167 CCTGCTGATGCCGATGCT 60.203 61.111 0.00 0.00 38.71 3.79
3363 4012 3.285215 CCCTGCTGATGCCGATGC 61.285 66.667 0.00 0.00 38.71 3.91
3364 4013 1.153107 TTCCCTGCTGATGCCGATG 60.153 57.895 0.00 0.00 38.71 3.84
3365 4014 1.147824 CTTCCCTGCTGATGCCGAT 59.852 57.895 0.00 0.00 38.71 4.18
3366 4015 1.340399 ATCTTCCCTGCTGATGCCGA 61.340 55.000 0.00 0.00 38.71 5.54
3367 4016 1.147824 ATCTTCCCTGCTGATGCCG 59.852 57.895 0.00 0.00 38.71 5.69
3368 4017 0.106819 ACATCTTCCCTGCTGATGCC 60.107 55.000 0.00 0.00 40.66 4.40
3369 4018 1.307097 GACATCTTCCCTGCTGATGC 58.693 55.000 0.00 0.00 40.66 3.91
3370 4019 1.964552 GGACATCTTCCCTGCTGATG 58.035 55.000 0.00 0.00 42.14 3.07
3379 4028 1.272147 ACAAAGCCAGGGACATCTTCC 60.272 52.381 0.00 0.00 45.00 3.46
3380 4029 2.087646 GACAAAGCCAGGGACATCTTC 58.912 52.381 0.00 0.00 0.00 2.87
3381 4030 1.707427 AGACAAAGCCAGGGACATCTT 59.293 47.619 0.00 0.00 0.00 2.40
3382 4031 1.366319 AGACAAAGCCAGGGACATCT 58.634 50.000 0.00 0.00 0.00 2.90
3383 4032 2.087646 GAAGACAAAGCCAGGGACATC 58.912 52.381 0.00 0.00 0.00 3.06
3384 4033 1.272147 GGAAGACAAAGCCAGGGACAT 60.272 52.381 0.00 0.00 0.00 3.06
3385 4034 0.110486 GGAAGACAAAGCCAGGGACA 59.890 55.000 0.00 0.00 0.00 4.02
3386 4035 0.110486 TGGAAGACAAAGCCAGGGAC 59.890 55.000 0.00 0.00 0.00 4.46
3387 4036 0.850100 TTGGAAGACAAAGCCAGGGA 59.150 50.000 0.00 0.00 35.79 4.20
3388 4037 0.961753 GTTGGAAGACAAAGCCAGGG 59.038 55.000 0.00 0.00 41.58 4.45
3389 4038 0.961753 GGTTGGAAGACAAAGCCAGG 59.038 55.000 0.00 0.00 41.58 4.45
3390 4039 1.691196 TGGTTGGAAGACAAAGCCAG 58.309 50.000 0.00 0.00 41.58 4.85
3391 4040 2.151502 TTGGTTGGAAGACAAAGCCA 57.848 45.000 0.00 0.00 41.58 4.75
3392 4041 3.097877 CTTTGGTTGGAAGACAAAGCC 57.902 47.619 0.00 0.00 42.88 4.35
3395 4044 2.685897 CGGACTTTGGTTGGAAGACAAA 59.314 45.455 0.00 0.00 41.58 2.83
3396 4045 2.294074 CGGACTTTGGTTGGAAGACAA 58.706 47.619 0.00 0.00 36.54 3.18
3397 4046 1.210967 ACGGACTTTGGTTGGAAGACA 59.789 47.619 0.00 0.00 0.00 3.41
3398 4047 1.871676 GACGGACTTTGGTTGGAAGAC 59.128 52.381 0.00 0.00 0.00 3.01
3399 4048 1.487142 TGACGGACTTTGGTTGGAAGA 59.513 47.619 0.00 0.00 0.00 2.87
3400 4049 1.961793 TGACGGACTTTGGTTGGAAG 58.038 50.000 0.00 0.00 0.00 3.46
3401 4050 2.105821 AGATGACGGACTTTGGTTGGAA 59.894 45.455 0.00 0.00 0.00 3.53
3402 4051 1.697432 AGATGACGGACTTTGGTTGGA 59.303 47.619 0.00 0.00 0.00 3.53
3403 4052 2.185004 AGATGACGGACTTTGGTTGG 57.815 50.000 0.00 0.00 0.00 3.77
3404 4053 4.036262 TCAAAAGATGACGGACTTTGGTTG 59.964 41.667 0.00 0.00 36.62 3.77
3405 4054 4.204012 TCAAAAGATGACGGACTTTGGTT 58.796 39.130 0.00 0.00 36.62 3.67
3406 4055 3.815809 TCAAAAGATGACGGACTTTGGT 58.184 40.909 0.00 0.00 36.62 3.67
3418 4067 9.403110 CCAACTTCTTAAGAATGTCAAAAGATG 57.597 33.333 18.02 8.66 33.01 2.90
3419 4068 9.136323 ACCAACTTCTTAAGAATGTCAAAAGAT 57.864 29.630 18.02 0.00 33.01 2.40
3420 4069 8.519799 ACCAACTTCTTAAGAATGTCAAAAGA 57.480 30.769 18.02 0.00 33.01 2.52
3421 4070 9.237846 GAACCAACTTCTTAAGAATGTCAAAAG 57.762 33.333 18.02 6.68 33.01 2.27
3422 4071 8.744652 TGAACCAACTTCTTAAGAATGTCAAAA 58.255 29.630 18.02 0.00 33.01 2.44
3423 4072 8.287439 TGAACCAACTTCTTAAGAATGTCAAA 57.713 30.769 18.02 0.00 33.01 2.69
3424 4073 7.873719 TGAACCAACTTCTTAAGAATGTCAA 57.126 32.000 18.02 0.00 33.01 3.18
3425 4074 7.873719 TTGAACCAACTTCTTAAGAATGTCA 57.126 32.000 18.02 11.69 33.01 3.58
3426 4075 9.750125 ATTTTGAACCAACTTCTTAAGAATGTC 57.250 29.630 18.02 9.58 33.01 3.06
3429 4078 9.546428 CCAATTTTGAACCAACTTCTTAAGAAT 57.454 29.630 18.02 2.42 33.01 2.40
3430 4079 7.984617 CCCAATTTTGAACCAACTTCTTAAGAA 59.015 33.333 16.85 16.85 0.00 2.52
3431 4080 7.343316 TCCCAATTTTGAACCAACTTCTTAAGA 59.657 33.333 0.00 0.00 0.00 2.10
3432 4081 7.496747 TCCCAATTTTGAACCAACTTCTTAAG 58.503 34.615 0.00 0.00 0.00 1.85
3433 4082 7.425224 TCCCAATTTTGAACCAACTTCTTAA 57.575 32.000 0.00 0.00 0.00 1.85
3434 4083 7.610580 ATCCCAATTTTGAACCAACTTCTTA 57.389 32.000 0.00 0.00 0.00 2.10
3435 4084 5.948742 TCCCAATTTTGAACCAACTTCTT 57.051 34.783 0.00 0.00 0.00 2.52
3436 4085 7.454380 TGATATCCCAATTTTGAACCAACTTCT 59.546 33.333 0.00 0.00 0.00 2.85
3437 4086 7.610865 TGATATCCCAATTTTGAACCAACTTC 58.389 34.615 0.00 0.00 0.00 3.01
3438 4087 7.552050 TGATATCCCAATTTTGAACCAACTT 57.448 32.000 0.00 0.00 0.00 2.66
3439 4088 7.738437 ATGATATCCCAATTTTGAACCAACT 57.262 32.000 0.00 0.00 0.00 3.16
3440 4089 7.926018 GGTATGATATCCCAATTTTGAACCAAC 59.074 37.037 0.00 0.00 0.00 3.77
3441 4090 7.843760 AGGTATGATATCCCAATTTTGAACCAA 59.156 33.333 0.00 0.00 0.00 3.67
3442 4091 7.361438 AGGTATGATATCCCAATTTTGAACCA 58.639 34.615 0.00 0.00 0.00 3.67
3443 4092 7.839680 AGGTATGATATCCCAATTTTGAACC 57.160 36.000 0.00 0.00 0.00 3.62
3444 4093 9.014297 CCTAGGTATGATATCCCAATTTTGAAC 57.986 37.037 0.00 0.00 0.00 3.18
3445 4094 8.732854 ACCTAGGTATGATATCCCAATTTTGAA 58.267 33.333 14.41 0.00 0.00 2.69
3446 4095 8.163408 CACCTAGGTATGATATCCCAATTTTGA 58.837 37.037 15.80 0.00 0.00 2.69
3447 4096 7.944554 ACACCTAGGTATGATATCCCAATTTTG 59.055 37.037 15.80 0.00 0.00 2.44
3448 4097 8.057246 ACACCTAGGTATGATATCCCAATTTT 57.943 34.615 15.80 0.00 0.00 1.82
3449 4098 7.257053 GGACACCTAGGTATGATATCCCAATTT 60.257 40.741 15.80 0.00 0.00 1.82
3450 4099 6.215636 GGACACCTAGGTATGATATCCCAATT 59.784 42.308 15.80 0.00 0.00 2.32
3451 4100 5.726793 GGACACCTAGGTATGATATCCCAAT 59.273 44.000 15.80 0.00 0.00 3.16
3452 4101 5.091552 GGACACCTAGGTATGATATCCCAA 58.908 45.833 15.80 0.00 0.00 4.12
3453 4102 4.360140 AGGACACCTAGGTATGATATCCCA 59.640 45.833 15.80 0.00 28.47 4.37
3454 4103 4.949121 AGGACACCTAGGTATGATATCCC 58.051 47.826 15.80 0.00 28.47 3.85
3455 4104 8.062536 AGATAAGGACACCTAGGTATGATATCC 58.937 40.741 15.80 13.97 31.13 2.59
3459 4108 9.845214 AAATAGATAAGGACACCTAGGTATGAT 57.155 33.333 15.80 0.00 31.13 2.45
3460 4109 9.670442 AAAATAGATAAGGACACCTAGGTATGA 57.330 33.333 15.80 0.00 31.13 2.15
3483 4132 9.067986 ACCAATGTTGAACCAACTTTTTAAAAA 57.932 25.926 12.62 12.62 43.85 1.94
3484 4133 8.622948 ACCAATGTTGAACCAACTTTTTAAAA 57.377 26.923 10.63 0.00 43.85 1.52
3485 4134 9.892130 ATACCAATGTTGAACCAACTTTTTAAA 57.108 25.926 10.63 0.00 43.85 1.52
3486 4135 9.319143 CATACCAATGTTGAACCAACTTTTTAA 57.681 29.630 10.63 0.80 43.85 1.52
3487 4136 8.478877 ACATACCAATGTTGAACCAACTTTTTA 58.521 29.630 10.63 5.63 44.07 1.52
3488 4137 7.334858 ACATACCAATGTTGAACCAACTTTTT 58.665 30.769 10.63 4.01 44.07 1.94
3489 4138 6.883744 ACATACCAATGTTGAACCAACTTTT 58.116 32.000 10.63 3.08 44.07 2.27
3490 4139 6.478512 ACATACCAATGTTGAACCAACTTT 57.521 33.333 10.63 7.93 44.07 2.66
3536 4185 8.783093 GGCCAAAATTAATAAGAAGTGCTTTTT 58.217 29.630 0.00 0.00 38.05 1.94
3537 4186 7.390440 GGGCCAAAATTAATAAGAAGTGCTTTT 59.610 33.333 4.39 0.00 38.05 2.27
3538 4187 6.878923 GGGCCAAAATTAATAAGAAGTGCTTT 59.121 34.615 4.39 0.00 38.05 3.51
3539 4188 6.213397 AGGGCCAAAATTAATAAGAAGTGCTT 59.787 34.615 6.18 0.00 40.68 3.91
3540 4189 5.721480 AGGGCCAAAATTAATAAGAAGTGCT 59.279 36.000 6.18 0.00 0.00 4.40
3541 4190 5.977635 AGGGCCAAAATTAATAAGAAGTGC 58.022 37.500 6.18 0.00 0.00 4.40
3542 4191 9.750125 GATAAGGGCCAAAATTAATAAGAAGTG 57.250 33.333 6.18 0.00 0.00 3.16
3543 4192 9.715119 AGATAAGGGCCAAAATTAATAAGAAGT 57.285 29.630 6.18 0.00 0.00 3.01
3589 4238 9.136323 GGTATGATATCCCAAAGTTTCAGATTT 57.864 33.333 0.00 0.00 0.00 2.17
3590 4239 8.506083 AGGTATGATATCCCAAAGTTTCAGATT 58.494 33.333 0.00 0.00 0.00 2.40
3591 4240 8.050316 AGGTATGATATCCCAAAGTTTCAGAT 57.950 34.615 0.00 3.15 0.00 2.90
3592 4241 7.451731 AGGTATGATATCCCAAAGTTTCAGA 57.548 36.000 0.00 0.00 0.00 3.27
3593 4242 7.880195 CCTAGGTATGATATCCCAAAGTTTCAG 59.120 40.741 0.00 0.00 0.00 3.02
3594 4243 7.349859 ACCTAGGTATGATATCCCAAAGTTTCA 59.650 37.037 14.41 0.00 0.00 2.69
3595 4244 7.661847 CACCTAGGTATGATATCCCAAAGTTTC 59.338 40.741 15.80 0.00 0.00 2.78
3596 4245 7.128883 ACACCTAGGTATGATATCCCAAAGTTT 59.871 37.037 15.80 0.00 0.00 2.66
3597 4246 6.619852 ACACCTAGGTATGATATCCCAAAGTT 59.380 38.462 15.80 0.00 0.00 2.66
3598 4247 6.151049 ACACCTAGGTATGATATCCCAAAGT 58.849 40.000 15.80 0.00 0.00 2.66
3599 4248 6.295916 GGACACCTAGGTATGATATCCCAAAG 60.296 46.154 15.80 0.00 0.00 2.77
3600 4249 5.546499 GGACACCTAGGTATGATATCCCAAA 59.454 44.000 15.80 0.00 0.00 3.28
3601 4250 5.091552 GGACACCTAGGTATGATATCCCAA 58.908 45.833 15.80 0.00 0.00 4.12
3602 4251 4.684724 GGACACCTAGGTATGATATCCCA 58.315 47.826 15.80 0.00 0.00 4.37
3603 4252 3.700038 CGGACACCTAGGTATGATATCCC 59.300 52.174 15.80 0.00 0.00 3.85
3604 4253 4.342359 ACGGACACCTAGGTATGATATCC 58.658 47.826 15.80 13.09 0.00 2.59
3605 4254 5.243283 ACAACGGACACCTAGGTATGATATC 59.757 44.000 15.80 5.60 0.00 1.63
3606 4255 5.145564 ACAACGGACACCTAGGTATGATAT 58.854 41.667 15.80 0.00 0.00 1.63
3607 4256 4.539726 ACAACGGACACCTAGGTATGATA 58.460 43.478 15.80 0.00 0.00 2.15
3608 4257 3.371965 ACAACGGACACCTAGGTATGAT 58.628 45.455 15.80 0.00 0.00 2.45
3609 4258 2.811410 ACAACGGACACCTAGGTATGA 58.189 47.619 15.80 0.00 0.00 2.15
3610 4259 3.444742 TGTACAACGGACACCTAGGTATG 59.555 47.826 15.80 5.90 0.00 2.39
3611 4260 3.445096 GTGTACAACGGACACCTAGGTAT 59.555 47.826 15.80 1.84 41.13 2.73
3612 4261 2.819608 GTGTACAACGGACACCTAGGTA 59.180 50.000 15.80 0.00 41.13 3.08
3613 4262 1.615392 GTGTACAACGGACACCTAGGT 59.385 52.381 9.21 9.21 41.13 3.08
3614 4263 2.358939 GTGTACAACGGACACCTAGG 57.641 55.000 7.41 7.41 41.13 3.02
3619 4268 1.067916 ACGGGTGTACAACGGACAC 59.932 57.895 23.68 0.60 45.31 3.67
3620 4269 1.067749 CACGGGTGTACAACGGACA 59.932 57.895 23.68 0.00 0.00 4.02
3621 4270 0.530431 AACACGGGTGTACAACGGAC 60.530 55.000 23.68 0.39 44.13 4.79
3622 4271 0.249405 GAACACGGGTGTACAACGGA 60.249 55.000 23.68 0.00 44.13 4.69
3623 4272 0.530211 TGAACACGGGTGTACAACGG 60.530 55.000 20.83 18.82 44.13 4.44
3624 4273 1.504359 ATGAACACGGGTGTACAACG 58.496 50.000 16.81 16.81 44.13 4.10
3625 4274 3.974871 AAATGAACACGGGTGTACAAC 57.025 42.857 0.97 0.97 44.13 3.32
3626 4275 4.158025 ACAAAAATGAACACGGGTGTACAA 59.842 37.500 4.68 0.00 44.13 2.41
3627 4276 3.695060 ACAAAAATGAACACGGGTGTACA 59.305 39.130 4.68 0.00 44.13 2.90
3628 4277 4.039032 CACAAAAATGAACACGGGTGTAC 58.961 43.478 4.68 0.00 44.13 2.90
3629 4278 3.066900 CCACAAAAATGAACACGGGTGTA 59.933 43.478 4.68 0.00 44.13 2.90
3631 4280 2.468831 CCACAAAAATGAACACGGGTG 58.531 47.619 0.00 0.00 0.00 4.61
3632 4281 1.410882 CCCACAAAAATGAACACGGGT 59.589 47.619 0.00 0.00 0.00 5.28
3633 4282 1.270041 CCCCACAAAAATGAACACGGG 60.270 52.381 0.00 0.00 0.00 5.28
3634 4283 1.683917 TCCCCACAAAAATGAACACGG 59.316 47.619 0.00 0.00 0.00 4.94
3635 4284 3.444703 TTCCCCACAAAAATGAACACG 57.555 42.857 0.00 0.00 0.00 4.49
3636 4285 4.064388 CCATTCCCCACAAAAATGAACAC 58.936 43.478 0.00 0.00 33.22 3.32
3637 4286 3.072184 CCCATTCCCCACAAAAATGAACA 59.928 43.478 0.00 0.00 33.22 3.18
3638 4287 3.072330 ACCCATTCCCCACAAAAATGAAC 59.928 43.478 0.00 0.00 33.22 3.18
3639 4288 3.072184 CACCCATTCCCCACAAAAATGAA 59.928 43.478 0.00 0.00 33.22 2.57
3640 4289 2.636893 CACCCATTCCCCACAAAAATGA 59.363 45.455 0.00 0.00 33.22 2.57
3641 4290 2.875267 GCACCCATTCCCCACAAAAATG 60.875 50.000 0.00 0.00 0.00 2.32
3642 4291 1.350684 GCACCCATTCCCCACAAAAAT 59.649 47.619 0.00 0.00 0.00 1.82
3643 4292 0.761802 GCACCCATTCCCCACAAAAA 59.238 50.000 0.00 0.00 0.00 1.94
3644 4293 1.124477 GGCACCCATTCCCCACAAAA 61.124 55.000 0.00 0.00 0.00 2.44
3645 4294 1.535202 GGCACCCATTCCCCACAAA 60.535 57.895 0.00 0.00 0.00 2.83
3646 4295 2.119391 GGCACCCATTCCCCACAA 59.881 61.111 0.00 0.00 0.00 3.33
3647 4296 4.358841 CGGCACCCATTCCCCACA 62.359 66.667 0.00 0.00 0.00 4.17
3652 4301 2.279037 ATACCACCGGCACCCATTCC 62.279 60.000 0.00 0.00 0.00 3.01
3653 4302 0.818040 GATACCACCGGCACCCATTC 60.818 60.000 0.00 0.00 0.00 2.67
3654 4303 1.226262 GATACCACCGGCACCCATT 59.774 57.895 0.00 0.00 0.00 3.16
3655 4304 2.752807 GGATACCACCGGCACCCAT 61.753 63.158 0.00 0.00 0.00 4.00
3656 4305 3.404438 GGATACCACCGGCACCCA 61.404 66.667 0.00 0.00 0.00 4.51
3657 4306 3.404438 TGGATACCACCGGCACCC 61.404 66.667 0.00 0.00 0.00 4.61
3666 4315 1.357137 TTCCAGCACTGTGGATACCA 58.643 50.000 10.21 0.00 46.31 3.25
3667 4316 2.717639 ATTCCAGCACTGTGGATACC 57.282 50.000 10.21 0.00 46.31 2.73
3668 4317 4.516698 CCATAATTCCAGCACTGTGGATAC 59.483 45.833 10.21 0.00 46.31 2.24
3669 4318 4.165950 ACCATAATTCCAGCACTGTGGATA 59.834 41.667 10.21 0.00 46.31 2.59
3670 4319 3.053395 ACCATAATTCCAGCACTGTGGAT 60.053 43.478 10.21 0.00 46.31 3.41
3671 4320 2.308570 ACCATAATTCCAGCACTGTGGA 59.691 45.455 10.21 0.00 45.37 4.02
3672 4321 2.726821 ACCATAATTCCAGCACTGTGG 58.273 47.619 10.21 0.00 39.19 4.17
3673 4322 3.758023 TGAACCATAATTCCAGCACTGTG 59.242 43.478 2.76 2.76 0.00 3.66
3674 4323 4.032960 TGAACCATAATTCCAGCACTGT 57.967 40.909 0.00 0.00 0.00 3.55
3675 4324 4.218200 TGTTGAACCATAATTCCAGCACTG 59.782 41.667 0.00 0.00 0.00 3.66
3676 4325 4.406456 TGTTGAACCATAATTCCAGCACT 58.594 39.130 0.00 0.00 0.00 4.40
3677 4326 4.782019 TGTTGAACCATAATTCCAGCAC 57.218 40.909 0.00 0.00 0.00 4.40
3678 4327 5.065859 CGTATGTTGAACCATAATTCCAGCA 59.934 40.000 0.00 0.00 0.00 4.41
3679 4328 5.295787 TCGTATGTTGAACCATAATTCCAGC 59.704 40.000 0.00 0.00 0.00 4.85
3680 4329 6.918892 TCGTATGTTGAACCATAATTCCAG 57.081 37.500 0.00 0.00 0.00 3.86
3681 4330 7.988028 TGTATCGTATGTTGAACCATAATTCCA 59.012 33.333 0.00 0.00 0.00 3.53
3682 4331 8.373048 TGTATCGTATGTTGAACCATAATTCC 57.627 34.615 0.00 0.00 0.00 3.01
3684 4333 9.778741 AGATGTATCGTATGTTGAACCATAATT 57.221 29.630 0.00 0.00 0.00 1.40
3688 4337 9.778741 AATTAGATGTATCGTATGTTGAACCAT 57.221 29.630 0.00 0.00 0.00 3.55
3689 4338 9.607988 AAATTAGATGTATCGTATGTTGAACCA 57.392 29.630 0.00 0.00 0.00 3.67


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.