Multiple sequence alignment - TraesCS4A01G442700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G442700 chr4A 100.000 3657 0 0 1 3657 710678391 710674735 0.000000e+00 6754.0
1 TraesCS4A01G442700 chr4A 87.417 1049 127 4 1711 2755 710272233 710271186 0.000000e+00 1201.0
2 TraesCS4A01G442700 chr4A 85.741 1080 149 4 1715 2789 710284144 710283065 0.000000e+00 1136.0
3 TraesCS4A01G442700 chr4A 85.401 548 61 12 1000 1545 710695535 710695005 5.340000e-153 551.0
4 TraesCS4A01G442700 chr4A 84.335 549 76 7 999 1545 703651682 703652222 2.500000e-146 529.0
5 TraesCS4A01G442700 chr4A 83.971 549 78 7 999 1545 703707252 703707792 5.410000e-143 518.0
6 TraesCS4A01G442700 chr4A 83.607 549 80 7 999 1545 703605429 703605969 1.170000e-139 507.0
7 TraesCS4A01G442700 chr7D 92.571 1575 97 12 1595 3154 26559578 26558009 0.000000e+00 2242.0
8 TraesCS4A01G442700 chr7D 87.067 1098 137 4 1697 2789 25898020 25896923 0.000000e+00 1236.0
9 TraesCS4A01G442700 chr7D 89.137 939 59 24 628 1546 26560591 26559676 0.000000e+00 1129.0
10 TraesCS4A01G442700 chr7D 91.667 420 28 3 3240 3657 26557194 26556780 3.170000e-160 575.0
11 TraesCS4A01G442700 chr7D 85.553 533 62 9 1020 1551 25898656 25898138 8.930000e-151 544.0
12 TraesCS4A01G442700 chr7A 93.883 1226 63 7 1595 2808 26977750 26976525 0.000000e+00 1838.0
13 TraesCS4A01G442700 chr7A 87.337 1074 129 7 1686 2755 26823238 26822168 0.000000e+00 1223.0
14 TraesCS4A01G442700 chr7A 87.302 1008 125 3 1697 2701 27032265 27031258 0.000000e+00 1149.0
15 TraesCS4A01G442700 chr7A 90.711 872 51 18 680 1546 26978701 26977855 0.000000e+00 1134.0
16 TraesCS4A01G442700 chr7A 86.882 526 57 4 1020 1545 27032937 27032424 2.450000e-161 579.0
17 TraesCS4A01G442700 chr7A 83.746 566 74 12 999 1561 27604634 27605184 1.510000e-143 520.0
18 TraesCS4A01G442700 chr7A 90.780 282 17 8 3380 3657 26976121 26975845 5.770000e-98 368.0
19 TraesCS4A01G442700 chr7A 88.148 135 16 0 3247 3381 26976367 26976233 1.050000e-35 161.0
20 TraesCS4A01G442700 chr2D 89.463 968 97 3 1697 2662 338331177 338330213 0.000000e+00 1218.0
21 TraesCS4A01G442700 chr2A 89.256 968 99 3 1697 2662 448294279 448293315 0.000000e+00 1206.0
22 TraesCS4A01G442700 chr2A 86.422 545 57 9 1001 1544 448294893 448294365 6.810000e-162 580.0
23 TraesCS4A01G442700 chr2B 86.034 580 61 12 972 1546 800172531 800171967 4.040000e-169 604.0
24 TraesCS4A01G442700 chr2B 100.000 29 0 0 2839 2867 448777323 448777295 2.000000e-03 54.7
25 TraesCS4A01G442700 chr3B 85.455 550 64 12 1001 1550 224961037 224960504 3.190000e-155 558.0
26 TraesCS4A01G442700 chr3D 94.737 38 2 0 3174 3211 593338815 593338778 3.940000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G442700 chr4A 710674735 710678391 3656 True 6754.000000 6754 100.0000 1 3657 1 chr4A.!!$R3 3656
1 TraesCS4A01G442700 chr4A 710271186 710272233 1047 True 1201.000000 1201 87.4170 1711 2755 1 chr4A.!!$R1 1044
2 TraesCS4A01G442700 chr4A 710283065 710284144 1079 True 1136.000000 1136 85.7410 1715 2789 1 chr4A.!!$R2 1074
3 TraesCS4A01G442700 chr4A 710695005 710695535 530 True 551.000000 551 85.4010 1000 1545 1 chr4A.!!$R4 545
4 TraesCS4A01G442700 chr4A 703651682 703652222 540 False 529.000000 529 84.3350 999 1545 1 chr4A.!!$F2 546
5 TraesCS4A01G442700 chr4A 703707252 703707792 540 False 518.000000 518 83.9710 999 1545 1 chr4A.!!$F3 546
6 TraesCS4A01G442700 chr4A 703605429 703605969 540 False 507.000000 507 83.6070 999 1545 1 chr4A.!!$F1 546
7 TraesCS4A01G442700 chr7D 26556780 26560591 3811 True 1315.333333 2242 91.1250 628 3657 3 chr7D.!!$R2 3029
8 TraesCS4A01G442700 chr7D 25896923 25898656 1733 True 890.000000 1236 86.3100 1020 2789 2 chr7D.!!$R1 1769
9 TraesCS4A01G442700 chr7A 26822168 26823238 1070 True 1223.000000 1223 87.3370 1686 2755 1 chr7A.!!$R1 1069
10 TraesCS4A01G442700 chr7A 26975845 26978701 2856 True 875.250000 1838 90.8805 680 3657 4 chr7A.!!$R2 2977
11 TraesCS4A01G442700 chr7A 27031258 27032937 1679 True 864.000000 1149 87.0920 1020 2701 2 chr7A.!!$R3 1681
12 TraesCS4A01G442700 chr7A 27604634 27605184 550 False 520.000000 520 83.7460 999 1561 1 chr7A.!!$F1 562
13 TraesCS4A01G442700 chr2D 338330213 338331177 964 True 1218.000000 1218 89.4630 1697 2662 1 chr2D.!!$R1 965
14 TraesCS4A01G442700 chr2A 448293315 448294893 1578 True 893.000000 1206 87.8390 1001 2662 2 chr2A.!!$R1 1661
15 TraesCS4A01G442700 chr2B 800171967 800172531 564 True 604.000000 604 86.0340 972 1546 1 chr2B.!!$R2 574
16 TraesCS4A01G442700 chr3B 224960504 224961037 533 True 558.000000 558 85.4550 1001 1550 1 chr3B.!!$R1 549

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
411 412 0.036306 AACCGAGACATTGTGGACCC 59.964 55.0 0.00 0.0 0.00 4.46 F
470 471 0.105039 CTCTCAGGGGAACATACGGC 59.895 60.0 0.00 0.0 0.00 5.68 F
476 477 0.107268 GGGGAACATACGGCGGTTAT 59.893 55.0 13.24 0.0 0.00 1.89 F
484 485 0.108233 TACGGCGGTTATTGTGGTCC 60.108 55.0 13.24 0.0 0.00 4.46 F
488 489 0.167251 GCGGTTATTGTGGTCCAACG 59.833 55.0 0.00 0.0 35.44 4.10 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1824 2038 0.536724 CATGATGTCGTCAGGGTCCA 59.463 55.000 0.50 0.00 40.92 4.02 R
2215 2429 1.300620 CTTGACGTCGCCCTTGACA 60.301 57.895 11.62 0.00 38.84 3.58 R
2591 2805 4.351938 CCTTCCGTCACGCCGTGA 62.352 66.667 17.22 17.22 40.50 4.35 R
2655 2869 5.799827 TTTACCAGCCTAATTTGCTTGTT 57.200 34.783 10.36 0.00 36.81 2.83 R
2668 2884 3.862845 CGCCAAACATTTATTTACCAGCC 59.137 43.478 0.00 0.00 0.00 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
158 159 9.698617 ATTTTCGTATACGTGATAAGCTTTTTC 57.301 29.630 23.67 3.01 40.80 2.29
159 160 8.470040 TTTCGTATACGTGATAAGCTTTTTCT 57.530 30.769 23.67 0.00 40.80 2.52
160 161 8.470040 TTCGTATACGTGATAAGCTTTTTCTT 57.530 30.769 23.67 0.00 40.80 2.52
161 162 7.891782 TCGTATACGTGATAAGCTTTTTCTTG 58.108 34.615 23.67 2.44 40.80 3.02
162 163 7.756272 TCGTATACGTGATAAGCTTTTTCTTGA 59.244 33.333 23.67 0.00 40.80 3.02
163 164 8.540492 CGTATACGTGATAAGCTTTTTCTTGAT 58.460 33.333 17.16 0.00 34.11 2.57
166 167 7.907214 ACGTGATAAGCTTTTTCTTGATACT 57.093 32.000 3.20 0.00 0.00 2.12
167 168 8.324163 ACGTGATAAGCTTTTTCTTGATACTT 57.676 30.769 3.20 0.00 0.00 2.24
168 169 8.784043 ACGTGATAAGCTTTTTCTTGATACTTT 58.216 29.630 3.20 0.00 0.00 2.66
202 203 9.712305 TTTCAACTTCTTGGTTAACAATTTTCA 57.288 25.926 8.10 0.00 38.65 2.69
203 204 9.712305 TTCAACTTCTTGGTTAACAATTTTCAA 57.288 25.926 8.10 0.53 38.65 2.69
204 205 9.712305 TCAACTTCTTGGTTAACAATTTTCAAA 57.288 25.926 8.10 0.00 38.65 2.69
205 206 9.971744 CAACTTCTTGGTTAACAATTTTCAAAG 57.028 29.630 8.10 2.84 38.65 2.77
206 207 9.719355 AACTTCTTGGTTAACAATTTTCAAAGT 57.281 25.926 8.10 3.40 38.65 2.66
294 295 9.388506 TGAATAAAGCAAAAATGGAAAACAAGA 57.611 25.926 0.00 0.00 0.00 3.02
298 299 6.105657 AGCAAAAATGGAAAACAAGAAACG 57.894 33.333 0.00 0.00 0.00 3.60
299 300 5.641636 AGCAAAAATGGAAAACAAGAAACGT 59.358 32.000 0.00 0.00 0.00 3.99
300 301 5.732185 GCAAAAATGGAAAACAAGAAACGTG 59.268 36.000 0.00 0.00 0.00 4.49
301 302 6.401581 GCAAAAATGGAAAACAAGAAACGTGA 60.402 34.615 0.00 0.00 0.00 4.35
302 303 7.513968 CAAAAATGGAAAACAAGAAACGTGAA 58.486 30.769 0.00 0.00 0.00 3.18
303 304 6.641176 AAATGGAAAACAAGAAACGTGAAC 57.359 33.333 0.00 0.00 0.00 3.18
304 305 4.768130 TGGAAAACAAGAAACGTGAACA 57.232 36.364 0.00 0.00 0.00 3.18
305 306 4.728534 TGGAAAACAAGAAACGTGAACAG 58.271 39.130 0.00 0.00 0.00 3.16
306 307 4.456222 TGGAAAACAAGAAACGTGAACAGA 59.544 37.500 0.00 0.00 0.00 3.41
307 308 5.048643 TGGAAAACAAGAAACGTGAACAGAA 60.049 36.000 0.00 0.00 0.00 3.02
308 309 5.859648 GGAAAACAAGAAACGTGAACAGAAA 59.140 36.000 0.00 0.00 0.00 2.52
309 310 6.363896 GGAAAACAAGAAACGTGAACAGAAAA 59.636 34.615 0.00 0.00 0.00 2.29
310 311 7.095982 GGAAAACAAGAAACGTGAACAGAAAAA 60.096 33.333 0.00 0.00 0.00 1.94
311 312 7.883229 AAACAAGAAACGTGAACAGAAAAAT 57.117 28.000 0.00 0.00 0.00 1.82
312 313 8.973835 AAACAAGAAACGTGAACAGAAAAATA 57.026 26.923 0.00 0.00 0.00 1.40
313 314 8.614994 AACAAGAAACGTGAACAGAAAAATAG 57.385 30.769 0.00 0.00 0.00 1.73
314 315 7.981142 ACAAGAAACGTGAACAGAAAAATAGA 58.019 30.769 0.00 0.00 0.00 1.98
315 316 8.455682 ACAAGAAACGTGAACAGAAAAATAGAA 58.544 29.630 0.00 0.00 0.00 2.10
316 317 9.284594 CAAGAAACGTGAACAGAAAAATAGAAA 57.715 29.630 0.00 0.00 0.00 2.52
317 318 9.849166 AAGAAACGTGAACAGAAAAATAGAAAA 57.151 25.926 0.00 0.00 0.00 2.29
318 319 9.849166 AGAAACGTGAACAGAAAAATAGAAAAA 57.151 25.926 0.00 0.00 0.00 1.94
337 338 7.462590 AGAAAAATATTAGACTATGGCCTCCC 58.537 38.462 3.32 0.00 0.00 4.30
346 347 3.848558 TGGCCTCCCATTTGCCTA 58.151 55.556 3.32 0.00 45.56 3.93
347 348 1.614711 TGGCCTCCCATTTGCCTAG 59.385 57.895 3.32 0.00 45.56 3.02
348 349 1.152673 GGCCTCCCATTTGCCTAGG 60.153 63.158 3.67 3.67 42.01 3.02
349 350 1.829970 GCCTCCCATTTGCCTAGGC 60.830 63.158 27.71 27.71 45.37 3.93
350 351 1.152673 CCTCCCATTTGCCTAGGCC 60.153 63.158 30.81 13.48 41.09 5.19
351 352 1.526917 CTCCCATTTGCCTAGGCCG 60.527 63.158 30.81 15.91 41.09 6.13
352 353 2.270874 CTCCCATTTGCCTAGGCCGT 62.271 60.000 30.81 13.80 41.09 5.68
353 354 1.823899 CCCATTTGCCTAGGCCGTC 60.824 63.158 30.81 4.06 41.09 4.79
354 355 1.823899 CCATTTGCCTAGGCCGTCC 60.824 63.158 30.81 3.64 41.09 4.79
355 356 1.823899 CATTTGCCTAGGCCGTCCC 60.824 63.158 30.81 2.84 41.09 4.46
356 357 2.305607 ATTTGCCTAGGCCGTCCCA 61.306 57.895 30.81 8.34 41.09 4.37
357 358 1.645402 ATTTGCCTAGGCCGTCCCAT 61.645 55.000 30.81 10.51 41.09 4.00
358 359 2.550699 TTTGCCTAGGCCGTCCCATG 62.551 60.000 30.81 0.00 41.09 3.66
359 360 4.937431 GCCTAGGCCGTCCCATGC 62.937 72.222 24.19 0.00 35.39 4.06
366 367 3.124921 CCGTCCCATGCCGTTCAC 61.125 66.667 0.00 0.00 0.00 3.18
367 368 3.487202 CGTCCCATGCCGTTCACG 61.487 66.667 0.00 0.00 39.44 4.35
368 369 3.799755 GTCCCATGCCGTTCACGC 61.800 66.667 0.00 0.00 38.18 5.34
371 372 3.853330 CCATGCCGTTCACGCGAG 61.853 66.667 15.93 4.59 38.18 5.03
372 373 3.853330 CATGCCGTTCACGCGAGG 61.853 66.667 15.93 9.05 38.18 4.63
376 377 3.411351 CCGTTCACGCGAGGGTTG 61.411 66.667 15.93 0.00 38.18 3.77
377 378 4.072088 CGTTCACGCGAGGGTTGC 62.072 66.667 15.93 0.00 34.73 4.17
378 379 3.723348 GTTCACGCGAGGGTTGCC 61.723 66.667 15.93 0.00 34.73 4.52
379 380 3.936203 TTCACGCGAGGGTTGCCT 61.936 61.111 15.93 0.00 34.73 4.75
380 381 2.575893 TTCACGCGAGGGTTGCCTA 61.576 57.895 15.93 0.00 34.73 3.93
381 382 2.775032 TTCACGCGAGGGTTGCCTAC 62.775 60.000 15.93 0.00 34.73 3.18
382 383 4.430765 ACGCGAGGGTTGCCTACG 62.431 66.667 15.93 0.00 0.00 3.51
383 384 4.430765 CGCGAGGGTTGCCTACGT 62.431 66.667 0.00 0.00 0.00 3.57
384 385 2.508663 GCGAGGGTTGCCTACGTC 60.509 66.667 0.00 0.00 0.00 4.34
385 386 3.003113 GCGAGGGTTGCCTACGTCT 62.003 63.158 0.00 0.00 0.00 4.18
386 387 1.139095 CGAGGGTTGCCTACGTCTC 59.861 63.158 0.00 0.00 0.00 3.36
387 388 1.139095 GAGGGTTGCCTACGTCTCG 59.861 63.158 0.00 0.00 0.00 4.04
388 389 1.303888 AGGGTTGCCTACGTCTCGA 60.304 57.895 0.00 0.00 0.00 4.04
389 390 0.683504 AGGGTTGCCTACGTCTCGAT 60.684 55.000 0.00 0.00 0.00 3.59
390 391 1.027357 GGGTTGCCTACGTCTCGATA 58.973 55.000 0.00 0.00 0.00 2.92
391 392 1.612463 GGGTTGCCTACGTCTCGATAT 59.388 52.381 0.00 0.00 0.00 1.63
392 393 2.816087 GGGTTGCCTACGTCTCGATATA 59.184 50.000 0.00 0.00 0.00 0.86
393 394 3.254166 GGGTTGCCTACGTCTCGATATAA 59.746 47.826 0.00 0.00 0.00 0.98
394 395 4.225208 GGTTGCCTACGTCTCGATATAAC 58.775 47.826 0.00 0.00 0.00 1.89
395 396 4.225208 GTTGCCTACGTCTCGATATAACC 58.775 47.826 0.00 0.00 0.00 2.85
396 397 2.481568 TGCCTACGTCTCGATATAACCG 59.518 50.000 0.00 0.00 0.00 4.44
397 398 2.738846 GCCTACGTCTCGATATAACCGA 59.261 50.000 0.00 0.00 34.61 4.69
407 408 4.866921 TCGATATAACCGAGACATTGTGG 58.133 43.478 0.00 0.00 0.00 4.17
408 409 4.581409 TCGATATAACCGAGACATTGTGGA 59.419 41.667 0.00 0.00 0.00 4.02
409 410 4.680110 CGATATAACCGAGACATTGTGGAC 59.320 45.833 0.00 0.00 0.00 4.02
410 411 2.754946 TAACCGAGACATTGTGGACC 57.245 50.000 0.00 0.00 0.00 4.46
411 412 0.036306 AACCGAGACATTGTGGACCC 59.964 55.000 0.00 0.00 0.00 4.46
412 413 1.078426 CCGAGACATTGTGGACCCC 60.078 63.158 0.00 0.00 0.00 4.95
413 414 1.553690 CCGAGACATTGTGGACCCCT 61.554 60.000 0.00 0.00 0.00 4.79
414 415 0.108138 CGAGACATTGTGGACCCCTC 60.108 60.000 0.00 0.00 0.00 4.30
415 416 0.253327 GAGACATTGTGGACCCCTCC 59.747 60.000 0.00 0.00 37.04 4.30
416 417 0.178861 AGACATTGTGGACCCCTCCT 60.179 55.000 0.00 0.00 37.48 3.69
417 418 0.698818 GACATTGTGGACCCCTCCTT 59.301 55.000 0.00 0.00 37.48 3.36
418 419 0.698818 ACATTGTGGACCCCTCCTTC 59.301 55.000 0.00 0.00 37.48 3.46
419 420 0.995024 CATTGTGGACCCCTCCTTCT 59.005 55.000 0.00 0.00 37.48 2.85
420 421 0.995024 ATTGTGGACCCCTCCTTCTG 59.005 55.000 0.00 0.00 37.48 3.02
421 422 1.133809 TTGTGGACCCCTCCTTCTGG 61.134 60.000 0.00 0.00 37.48 3.86
422 423 2.610859 TGGACCCCTCCTTCTGGC 60.611 66.667 0.00 0.00 37.48 4.85
423 424 3.787001 GGACCCCTCCTTCTGGCG 61.787 72.222 0.00 0.00 33.07 5.69
424 425 4.475135 GACCCCTCCTTCTGGCGC 62.475 72.222 0.00 0.00 0.00 6.53
426 427 3.801997 CCCCTCCTTCTGGCGCAT 61.802 66.667 10.83 0.00 0.00 4.73
427 428 2.515523 CCCTCCTTCTGGCGCATG 60.516 66.667 10.83 0.05 0.00 4.06
428 429 3.207669 CCTCCTTCTGGCGCATGC 61.208 66.667 10.83 7.91 41.71 4.06
429 430 3.570638 CTCCTTCTGGCGCATGCG 61.571 66.667 34.83 34.83 44.10 4.73
439 440 4.088762 CGCATGCGGGTGTCACAC 62.089 66.667 31.99 0.00 35.56 3.82
440 441 2.977456 GCATGCGGGTGTCACACA 60.977 61.111 10.85 0.52 35.86 3.72
441 442 2.551006 GCATGCGGGTGTCACACAA 61.551 57.895 10.85 0.00 35.86 3.33
442 443 1.575922 CATGCGGGTGTCACACAAG 59.424 57.895 10.85 3.79 35.86 3.16
443 444 1.600636 ATGCGGGTGTCACACAAGG 60.601 57.895 10.85 0.00 35.86 3.61
444 445 2.978010 GCGGGTGTCACACAAGGG 60.978 66.667 10.85 0.00 35.86 3.95
445 446 2.508928 CGGGTGTCACACAAGGGT 59.491 61.111 10.85 0.00 35.86 4.34
446 447 1.153046 CGGGTGTCACACAAGGGTT 60.153 57.895 10.85 0.00 35.86 4.11
447 448 1.164041 CGGGTGTCACACAAGGGTTC 61.164 60.000 10.85 0.00 35.86 3.62
448 449 0.822121 GGGTGTCACACAAGGGTTCC 60.822 60.000 10.85 0.00 35.86 3.62
449 450 0.822121 GGTGTCACACAAGGGTTCCC 60.822 60.000 10.85 0.00 35.86 3.97
450 451 0.822121 GTGTCACACAAGGGTTCCCC 60.822 60.000 2.00 0.00 37.93 4.81
469 470 0.753262 CCTCTCAGGGGAACATACGG 59.247 60.000 0.00 0.00 0.00 4.02
470 471 0.105039 CTCTCAGGGGAACATACGGC 59.895 60.000 0.00 0.00 0.00 5.68
471 472 1.227263 CTCAGGGGAACATACGGCG 60.227 63.158 4.80 4.80 0.00 6.46
472 473 2.203015 CAGGGGAACATACGGCGG 60.203 66.667 13.24 0.00 0.00 6.13
473 474 2.686106 AGGGGAACATACGGCGGT 60.686 61.111 13.24 1.39 0.00 5.68
474 475 2.269883 GGGGAACATACGGCGGTT 59.730 61.111 13.24 5.68 0.00 4.44
475 476 0.977108 AGGGGAACATACGGCGGTTA 60.977 55.000 13.24 0.00 0.00 2.85
476 477 0.107268 GGGGAACATACGGCGGTTAT 59.893 55.000 13.24 0.00 0.00 1.89
477 478 1.475571 GGGGAACATACGGCGGTTATT 60.476 52.381 13.24 0.00 0.00 1.40
478 479 1.600485 GGGAACATACGGCGGTTATTG 59.400 52.381 13.24 3.54 0.00 1.90
479 480 2.282407 GGAACATACGGCGGTTATTGT 58.718 47.619 13.24 4.21 0.00 2.71
480 481 2.031191 GGAACATACGGCGGTTATTGTG 59.969 50.000 13.24 0.14 0.00 3.33
481 482 1.658994 ACATACGGCGGTTATTGTGG 58.341 50.000 13.24 0.00 0.00 4.17
482 483 1.065998 ACATACGGCGGTTATTGTGGT 60.066 47.619 13.24 0.00 0.00 4.16
483 484 1.595794 CATACGGCGGTTATTGTGGTC 59.404 52.381 13.24 0.00 0.00 4.02
484 485 0.108233 TACGGCGGTTATTGTGGTCC 60.108 55.000 13.24 0.00 0.00 4.46
485 486 1.376166 CGGCGGTTATTGTGGTCCA 60.376 57.895 0.00 0.00 0.00 4.02
486 487 0.956410 CGGCGGTTATTGTGGTCCAA 60.956 55.000 0.00 0.00 37.49 3.53
487 488 0.524414 GGCGGTTATTGTGGTCCAAC 59.476 55.000 0.00 0.00 35.44 3.77
488 489 0.167251 GCGGTTATTGTGGTCCAACG 59.833 55.000 0.00 0.00 35.44 4.10
489 490 1.798283 CGGTTATTGTGGTCCAACGA 58.202 50.000 0.00 0.00 35.44 3.85
490 491 2.144730 CGGTTATTGTGGTCCAACGAA 58.855 47.619 0.00 0.00 35.44 3.85
491 492 2.548904 CGGTTATTGTGGTCCAACGAAA 59.451 45.455 0.00 0.00 35.44 3.46
492 493 3.003482 CGGTTATTGTGGTCCAACGAAAA 59.997 43.478 0.00 0.00 35.44 2.29
493 494 4.320641 CGGTTATTGTGGTCCAACGAAAAT 60.321 41.667 0.00 0.00 35.44 1.82
494 495 4.920927 GGTTATTGTGGTCCAACGAAAATG 59.079 41.667 0.00 0.00 35.44 2.32
495 496 2.500509 TTGTGGTCCAACGAAAATGC 57.499 45.000 0.00 0.00 0.00 3.56
496 497 1.393603 TGTGGTCCAACGAAAATGCA 58.606 45.000 0.00 0.00 0.00 3.96
497 498 1.751351 TGTGGTCCAACGAAAATGCAA 59.249 42.857 0.00 0.00 0.00 4.08
498 499 2.166459 TGTGGTCCAACGAAAATGCAAA 59.834 40.909 0.00 0.00 0.00 3.68
499 500 3.190874 GTGGTCCAACGAAAATGCAAAA 58.809 40.909 0.00 0.00 0.00 2.44
500 501 3.000825 GTGGTCCAACGAAAATGCAAAAC 59.999 43.478 0.00 0.00 0.00 2.43
501 502 3.118956 TGGTCCAACGAAAATGCAAAACT 60.119 39.130 0.00 0.00 0.00 2.66
502 503 3.868661 GGTCCAACGAAAATGCAAAACTT 59.131 39.130 0.00 0.00 0.00 2.66
503 504 4.260172 GGTCCAACGAAAATGCAAAACTTG 60.260 41.667 0.00 0.00 0.00 3.16
519 520 7.281991 CAAAACTTGCCAACATATTTAGAGC 57.718 36.000 0.00 0.00 0.00 4.09
520 521 6.840780 AAACTTGCCAACATATTTAGAGCT 57.159 33.333 0.00 0.00 0.00 4.09
521 522 6.442513 AACTTGCCAACATATTTAGAGCTC 57.557 37.500 5.27 5.27 0.00 4.09
522 523 4.884164 ACTTGCCAACATATTTAGAGCTCC 59.116 41.667 10.93 0.00 0.00 4.70
523 524 3.820557 TGCCAACATATTTAGAGCTCCC 58.179 45.455 10.93 0.00 0.00 4.30
524 525 3.201930 TGCCAACATATTTAGAGCTCCCA 59.798 43.478 10.93 0.00 0.00 4.37
525 526 4.141181 TGCCAACATATTTAGAGCTCCCAT 60.141 41.667 10.93 2.50 0.00 4.00
526 527 5.073008 TGCCAACATATTTAGAGCTCCCATA 59.927 40.000 10.93 4.85 0.00 2.74
527 528 5.645497 GCCAACATATTTAGAGCTCCCATAG 59.355 44.000 10.93 0.00 0.00 2.23
559 560 7.923414 AAAAAGAGCTTTCATAATACTCCGT 57.077 32.000 0.00 0.00 31.45 4.69
560 561 7.541122 AAAAGAGCTTTCATAATACTCCGTC 57.459 36.000 0.00 0.00 31.45 4.79
561 562 5.854010 AGAGCTTTCATAATACTCCGTCA 57.146 39.130 0.00 0.00 0.00 4.35
562 563 5.837437 AGAGCTTTCATAATACTCCGTCAG 58.163 41.667 0.00 0.00 0.00 3.51
563 564 5.361285 AGAGCTTTCATAATACTCCGTCAGT 59.639 40.000 0.00 0.00 39.41 3.41
564 565 5.593010 AGCTTTCATAATACTCCGTCAGTC 58.407 41.667 0.00 0.00 36.43 3.51
565 566 4.745620 GCTTTCATAATACTCCGTCAGTCC 59.254 45.833 0.00 0.00 36.43 3.85
566 567 4.931661 TTCATAATACTCCGTCAGTCCC 57.068 45.455 0.00 0.00 36.43 4.46
567 568 2.882761 TCATAATACTCCGTCAGTCCCG 59.117 50.000 0.00 0.00 36.43 5.14
568 569 2.425143 TAATACTCCGTCAGTCCCGT 57.575 50.000 0.00 0.00 36.43 5.28
569 570 2.425143 AATACTCCGTCAGTCCCGTA 57.575 50.000 0.00 0.00 36.43 4.02
570 571 2.425143 ATACTCCGTCAGTCCCGTAA 57.575 50.000 0.00 0.00 36.43 3.18
571 572 2.425143 TACTCCGTCAGTCCCGTAAT 57.575 50.000 0.00 0.00 36.43 1.89
572 573 2.425143 ACTCCGTCAGTCCCGTAATA 57.575 50.000 0.00 0.00 0.00 0.98
573 574 2.941480 ACTCCGTCAGTCCCGTAATAT 58.059 47.619 0.00 0.00 0.00 1.28
574 575 4.090761 ACTCCGTCAGTCCCGTAATATA 57.909 45.455 0.00 0.00 0.00 0.86
575 576 4.464008 ACTCCGTCAGTCCCGTAATATAA 58.536 43.478 0.00 0.00 0.00 0.98
576 577 4.518211 ACTCCGTCAGTCCCGTAATATAAG 59.482 45.833 0.00 0.00 0.00 1.73
577 578 4.717877 TCCGTCAGTCCCGTAATATAAGA 58.282 43.478 0.00 0.00 0.00 2.10
578 579 4.758674 TCCGTCAGTCCCGTAATATAAGAG 59.241 45.833 0.00 0.00 0.00 2.85
579 580 4.474113 CGTCAGTCCCGTAATATAAGAGC 58.526 47.826 0.00 0.00 0.00 4.09
580 581 4.023450 CGTCAGTCCCGTAATATAAGAGCA 60.023 45.833 0.00 0.00 0.00 4.26
581 582 5.335740 CGTCAGTCCCGTAATATAAGAGCAT 60.336 44.000 0.00 0.00 0.00 3.79
582 583 6.456501 GTCAGTCCCGTAATATAAGAGCATT 58.543 40.000 0.00 0.00 0.00 3.56
583 584 6.929606 GTCAGTCCCGTAATATAAGAGCATTT 59.070 38.462 0.00 0.00 0.00 2.32
584 585 8.086522 GTCAGTCCCGTAATATAAGAGCATTTA 58.913 37.037 0.00 0.00 0.00 1.40
585 586 8.812972 TCAGTCCCGTAATATAAGAGCATTTAT 58.187 33.333 0.00 0.00 0.00 1.40
586 587 8.873830 CAGTCCCGTAATATAAGAGCATTTATG 58.126 37.037 3.71 0.00 0.00 1.90
587 588 8.812972 AGTCCCGTAATATAAGAGCATTTATGA 58.187 33.333 0.00 0.00 0.00 2.15
588 589 8.870879 GTCCCGTAATATAAGAGCATTTATGAC 58.129 37.037 0.00 0.00 0.00 3.06
589 590 8.590204 TCCCGTAATATAAGAGCATTTATGACA 58.410 33.333 0.00 0.00 0.00 3.58
590 591 8.656849 CCCGTAATATAAGAGCATTTATGACAC 58.343 37.037 0.00 0.00 0.00 3.67
591 592 9.424319 CCGTAATATAAGAGCATTTATGACACT 57.576 33.333 0.00 0.00 0.00 3.55
606 607 3.251817 CACTATAGGTGCGACCGTG 57.748 57.895 4.43 0.00 44.90 4.94
607 608 0.870307 CACTATAGGTGCGACCGTGC 60.870 60.000 4.43 0.00 44.90 5.34
608 609 1.657487 CTATAGGTGCGACCGTGCG 60.657 63.158 0.00 0.00 44.90 5.34
609 610 2.055310 CTATAGGTGCGACCGTGCGA 62.055 60.000 0.00 0.00 44.90 5.10
610 611 2.055310 TATAGGTGCGACCGTGCGAG 62.055 60.000 0.00 0.00 44.90 5.03
638 639 9.226345 GCAAGTATAATAAGATGCAACTTTGTC 57.774 33.333 14.90 0.00 34.10 3.18
647 648 6.922247 AGATGCAACTTTGTCATAGATGAG 57.078 37.500 5.01 0.00 37.51 2.90
650 651 6.915544 TGCAACTTTGTCATAGATGAGATC 57.084 37.500 5.01 0.00 37.51 2.75
654 655 9.102757 GCAACTTTGTCATAGATGAGATCTTTA 57.897 33.333 0.00 0.00 40.76 1.85
678 679 5.885912 AGTAAAGAAAAGGCAAGTTGTCTGA 59.114 36.000 11.49 0.00 29.54 3.27
683 684 5.885912 AGAAAAGGCAAGTTGTCTGAAAGTA 59.114 36.000 11.49 0.00 29.54 2.24
696 697 1.068885 TGAAAGTAACCAAATGCGCCG 60.069 47.619 4.18 0.00 0.00 6.46
715 716 2.345880 GAACTATTCGAGGCGGCCGA 62.346 60.000 33.48 16.29 0.00 5.54
716 717 1.745320 AACTATTCGAGGCGGCCGAT 61.745 55.000 33.48 17.60 35.84 4.18
717 718 0.892358 ACTATTCGAGGCGGCCGATA 60.892 55.000 33.48 15.57 35.84 2.92
718 719 0.456221 CTATTCGAGGCGGCCGATAT 59.544 55.000 33.48 13.99 35.84 1.63
719 720 1.674441 CTATTCGAGGCGGCCGATATA 59.326 52.381 33.48 14.12 35.84 0.86
766 767 2.601702 ATGCATGGTCCCGTGTCCA 61.602 57.895 0.00 0.00 38.14 4.02
794 798 7.905265 TCCCACAACAACAATAATTCATGAAT 58.095 30.769 15.36 15.36 0.00 2.57
843 847 2.180862 TCGAGATCGAGACCGCCTG 61.181 63.158 0.00 0.00 44.22 4.85
844 848 2.180862 CGAGATCGAGACCGCCTGA 61.181 63.158 0.00 0.00 43.02 3.86
845 849 1.511318 CGAGATCGAGACCGCCTGAT 61.511 60.000 0.00 0.00 43.02 2.90
846 850 0.239879 GAGATCGAGACCGCCTGATC 59.760 60.000 0.00 0.00 37.97 2.92
899 916 0.817654 TACCATCACGTCAGGAGCTG 59.182 55.000 0.00 0.00 0.00 4.24
916 960 1.848932 CTGATGCAGCACAGCGTTGT 61.849 55.000 0.00 0.00 37.55 3.32
940 984 1.511768 GTAGCCTCGTGGGTGAGAC 59.488 63.158 18.00 5.00 44.81 3.36
941 985 1.681327 TAGCCTCGTGGGTGAGACC 60.681 63.158 18.00 0.00 44.81 3.85
942 986 4.436998 GCCTCGTGGGTGAGACCG 62.437 72.222 5.54 0.00 39.83 4.79
943 987 2.989824 CCTCGTGGGTGAGACCGT 60.990 66.667 0.00 0.00 39.83 4.83
944 988 2.258591 CTCGTGGGTGAGACCGTG 59.741 66.667 0.00 0.00 39.83 4.94
945 989 2.203379 TCGTGGGTGAGACCGTGA 60.203 61.111 0.00 0.00 39.83 4.35
946 990 2.201436 CTCGTGGGTGAGACCGTGAG 62.201 65.000 0.00 0.00 39.83 3.51
947 991 2.265904 CGTGGGTGAGACCGTGAGA 61.266 63.158 0.00 0.00 39.83 3.27
948 992 1.289380 GTGGGTGAGACCGTGAGAC 59.711 63.158 0.00 0.00 39.83 3.36
1008 1059 2.100989 GGTAGCTATAGGATGGGGTCG 58.899 57.143 0.00 0.00 0.00 4.79
1131 1182 0.798776 GCTTCCACATCACCTTCGTG 59.201 55.000 0.00 0.00 41.72 4.35
1338 1389 0.888619 TCAAGGAGCTCGTCGTCAAT 59.111 50.000 9.78 0.00 0.00 2.57
1546 1597 3.024547 CTCGTCCCTCTCAAAGGTATGA 58.975 50.000 0.00 0.00 44.56 2.15
1547 1598 3.639094 CTCGTCCCTCTCAAAGGTATGAT 59.361 47.826 0.00 0.00 44.56 2.45
1548 1599 3.637229 TCGTCCCTCTCAAAGGTATGATC 59.363 47.826 0.00 0.00 44.56 2.92
1551 1602 5.363939 GTCCCTCTCAAAGGTATGATCTTG 58.636 45.833 0.00 0.00 44.56 3.02
1553 1604 5.488919 TCCCTCTCAAAGGTATGATCTTGTT 59.511 40.000 0.00 0.00 44.56 2.83
1555 1606 6.660949 CCCTCTCAAAGGTATGATCTTGTTTT 59.339 38.462 0.00 0.00 44.56 2.43
1556 1607 7.362401 CCCTCTCAAAGGTATGATCTTGTTTTG 60.362 40.741 0.00 1.95 44.56 2.44
1557 1608 7.175641 CCTCTCAAAGGTATGATCTTGTTTTGT 59.824 37.037 0.00 0.00 40.67 2.83
1559 1610 8.352201 TCTCAAAGGTATGATCTTGTTTTGTTG 58.648 33.333 0.00 0.00 0.00 3.33
1561 1612 7.920151 TCAAAGGTATGATCTTGTTTTGTTGTG 59.080 33.333 0.00 0.00 0.00 3.33
1563 1614 7.346751 AGGTATGATCTTGTTTTGTTGTGTT 57.653 32.000 0.00 0.00 0.00 3.32
1564 1615 7.781056 AGGTATGATCTTGTTTTGTTGTGTTT 58.219 30.769 0.00 0.00 0.00 2.83
1565 1616 7.920682 AGGTATGATCTTGTTTTGTTGTGTTTC 59.079 33.333 0.00 0.00 0.00 2.78
1567 1618 7.992180 ATGATCTTGTTTTGTTGTGTTTCTC 57.008 32.000 0.00 0.00 0.00 2.87
1568 1619 7.156876 TGATCTTGTTTTGTTGTGTTTCTCT 57.843 32.000 0.00 0.00 0.00 3.10
1569 1620 7.601856 TGATCTTGTTTTGTTGTGTTTCTCTT 58.398 30.769 0.00 0.00 0.00 2.85
1570 1621 7.541783 TGATCTTGTTTTGTTGTGTTTCTCTTG 59.458 33.333 0.00 0.00 0.00 3.02
1571 1622 6.744112 TCTTGTTTTGTTGTGTTTCTCTTGT 58.256 32.000 0.00 0.00 0.00 3.16
1575 1668 7.846485 TGTTTTGTTGTGTTTCTCTTGTTTTC 58.154 30.769 0.00 0.00 0.00 2.29
1577 1670 8.547894 GTTTTGTTGTGTTTCTCTTGTTTTCTT 58.452 29.630 0.00 0.00 0.00 2.52
1593 1700 9.450807 CTTGTTTTCTTTTGAAGTATGTACCAG 57.549 33.333 0.00 0.00 39.88 4.00
1600 1707 4.445452 TGAAGTATGTACCAGGTCGTTC 57.555 45.455 0.00 0.00 0.00 3.95
1606 1713 1.337728 TGTACCAGGTCGTTCTGCATG 60.338 52.381 0.00 0.00 33.64 4.06
1654 1771 7.757097 AAATTAGACGCAGACATAGTACTTG 57.243 36.000 0.00 2.03 0.00 3.16
1733 1947 0.604780 TGCAGAAGAGGCTCAGTTGC 60.605 55.000 22.24 22.24 0.00 4.17
1915 2129 1.052617 TCATCAACACCTGGGACGAA 58.947 50.000 0.00 0.00 0.00 3.85
2215 2429 4.250305 AACGTGCGGCCTGACCTT 62.250 61.111 0.00 0.00 35.61 3.50
2638 2852 4.201940 CGCAATGTTGATAGGCTCATCAAA 60.202 41.667 15.96 10.07 44.36 2.69
2655 2869 2.371841 TCAAAGAGGTGCTTCTGGCTTA 59.628 45.455 0.00 0.00 42.39 3.09
2678 2894 6.358974 AACAAGCAAATTAGGCTGGTAAAT 57.641 33.333 11.33 0.00 44.62 1.40
2679 2895 7.475137 AACAAGCAAATTAGGCTGGTAAATA 57.525 32.000 11.33 0.00 44.62 1.40
2696 2917 6.879993 TGGTAAATAAATGTTTGGCGAGTCTA 59.120 34.615 0.00 0.00 0.00 2.59
2712 2933 6.035327 GGCGAGTCTAAAGCGTTTATTAAGAA 59.965 38.462 0.00 0.00 0.00 2.52
2734 2956 5.536497 AGTAACCAATCCCTCTCCATTTT 57.464 39.130 0.00 0.00 0.00 1.82
2755 2977 7.769272 TTTTAAAGCTTCAGTCATGTTTTGG 57.231 32.000 0.00 0.00 0.00 3.28
2763 2985 5.957842 TCAGTCATGTTTTGGGTGATAAC 57.042 39.130 0.00 0.00 0.00 1.89
2797 3019 9.931210 GATTACCAAGATTTGTTATAAAGACGG 57.069 33.333 0.00 0.00 0.00 4.79
2846 3068 6.168270 AGCTTTATTCACATCTACTCCCTC 57.832 41.667 0.00 0.00 0.00 4.30
2847 3069 5.071115 AGCTTTATTCACATCTACTCCCTCC 59.929 44.000 0.00 0.00 0.00 4.30
2848 3070 5.163301 GCTTTATTCACATCTACTCCCTCCA 60.163 44.000 0.00 0.00 0.00 3.86
2851 3073 3.981516 TCACATCTACTCCCTCCATCT 57.018 47.619 0.00 0.00 0.00 2.90
2859 3081 5.970289 TCTACTCCCTCCATCTCATAATGT 58.030 41.667 0.00 0.00 0.00 2.71
2861 3083 7.178573 TCTACTCCCTCCATCTCATAATGTAG 58.821 42.308 0.00 0.00 0.00 2.74
2870 3106 7.896811 TCCATCTCATAATGTAGGATGTGTAC 58.103 38.462 0.00 0.00 33.94 2.90
2878 3114 8.604035 CATAATGTAGGATGTGTACTGTCAAAC 58.396 37.037 0.00 0.00 0.00 2.93
2884 3120 4.318546 GGATGTGTACTGTCAAACAACGTC 60.319 45.833 0.00 0.00 0.00 4.34
2885 3121 2.931325 TGTGTACTGTCAAACAACGTCC 59.069 45.455 0.00 0.00 0.00 4.79
2886 3122 3.192466 GTGTACTGTCAAACAACGTCCT 58.808 45.455 0.00 0.00 0.00 3.85
2887 3123 3.000925 GTGTACTGTCAAACAACGTCCTG 59.999 47.826 0.00 0.00 0.00 3.86
2888 3124 1.014352 ACTGTCAAACAACGTCCTGC 58.986 50.000 0.00 0.00 0.00 4.85
2889 3125 1.013596 CTGTCAAACAACGTCCTGCA 58.986 50.000 0.00 0.00 0.00 4.41
2890 3126 1.603802 CTGTCAAACAACGTCCTGCAT 59.396 47.619 0.00 0.00 0.00 3.96
2891 3127 2.020720 TGTCAAACAACGTCCTGCATT 58.979 42.857 0.00 0.00 0.00 3.56
2892 3128 3.206964 TGTCAAACAACGTCCTGCATTA 58.793 40.909 0.00 0.00 0.00 1.90
2893 3129 3.818210 TGTCAAACAACGTCCTGCATTAT 59.182 39.130 0.00 0.00 0.00 1.28
2894 3130 4.158384 GTCAAACAACGTCCTGCATTATG 58.842 43.478 0.00 0.00 0.00 1.90
2895 3131 3.190327 TCAAACAACGTCCTGCATTATGG 59.810 43.478 0.00 0.00 0.00 2.74
2896 3132 1.750193 ACAACGTCCTGCATTATGGG 58.250 50.000 0.00 0.00 0.00 4.00
2897 3133 1.280710 ACAACGTCCTGCATTATGGGA 59.719 47.619 0.00 0.00 0.00 4.37
2898 3134 1.670811 CAACGTCCTGCATTATGGGAC 59.329 52.381 11.17 11.17 44.16 4.46
2921 3157 6.803642 ACGAAGGGAGTATGATTTACACTAC 58.196 40.000 0.00 0.00 0.00 2.73
2923 3159 6.696148 CGAAGGGAGTATGATTTACACTACAC 59.304 42.308 0.00 0.00 0.00 2.90
2941 3177 4.325028 ACACGGATGTTATTATACGCCA 57.675 40.909 0.00 0.00 37.93 5.69
2946 3182 6.588756 CACGGATGTTATTATACGCCAAGTAT 59.411 38.462 0.00 0.00 46.90 2.12
2949 3185 7.329962 CGGATGTTATTATACGCCAAGTATCAA 59.670 37.037 0.00 0.00 44.41 2.57
2958 3194 9.602568 TTATACGCCAAGTATCAAAAATACTCA 57.397 29.630 0.00 0.00 44.41 3.41
2959 3195 8.677148 ATACGCCAAGTATCAAAAATACTCAT 57.323 30.769 0.00 0.00 42.03 2.90
2972 3208 6.933514 AAAATACTCATCAACACCCCAAAT 57.066 33.333 0.00 0.00 0.00 2.32
2990 3226 6.540914 CCCCAAATATACTTCGCTTTTACTCA 59.459 38.462 0.00 0.00 0.00 3.41
3004 3240 5.730568 GCTTTTACTCAGTGTTGGTTGACTG 60.731 44.000 0.00 0.00 40.89 3.51
3012 3248 1.202879 TGTTGGTTGACTGGACATCCC 60.203 52.381 0.00 0.00 34.29 3.85
3037 3273 6.529463 CTTTCAAAAGCATTCAACCGAAAT 57.471 33.333 0.00 0.00 34.01 2.17
3038 3274 7.636259 CTTTCAAAAGCATTCAACCGAAATA 57.364 32.000 0.00 0.00 34.01 1.40
3045 3281 6.515272 AGCATTCAACCGAAATAATGAACT 57.485 33.333 0.00 0.00 34.88 3.01
3046 3282 6.324819 AGCATTCAACCGAAATAATGAACTG 58.675 36.000 0.00 0.00 34.88 3.16
3081 3317 4.999311 GCAGGAGTATGATTATGTGATGCA 59.001 41.667 0.00 0.00 0.00 3.96
3127 3363 2.544844 AGAAAGATGGGTAGACCGGA 57.455 50.000 9.46 0.00 44.64 5.14
3161 3404 0.103937 TGATCATGTATCGCCGTGCA 59.896 50.000 0.00 0.00 37.42 4.57
3165 3408 1.227263 ATGTATCGCCGTGCACCTC 60.227 57.895 12.15 1.80 0.00 3.85
3171 3414 2.434185 GCCGTGCACCTCGAATCA 60.434 61.111 12.15 0.00 0.00 2.57
3176 3419 1.588404 CGTGCACCTCGAATCACATAC 59.412 52.381 12.15 0.00 0.00 2.39
3177 3420 1.588404 GTGCACCTCGAATCACATACG 59.412 52.381 5.22 0.00 0.00 3.06
3184 3427 4.201990 ACCTCGAATCACATACGGAACTAC 60.202 45.833 0.00 0.00 0.00 2.73
3185 3428 4.036498 CCTCGAATCACATACGGAACTACT 59.964 45.833 0.00 0.00 0.00 2.57
3206 4103 1.457303 CTGCACACGACAGTTTAGAGC 59.543 52.381 0.00 0.00 0.00 4.09
3213 4110 2.993899 ACGACAGTTTAGAGCCGATTTG 59.006 45.455 0.00 0.00 0.00 2.32
3214 4111 2.222819 CGACAGTTTAGAGCCGATTTGC 60.223 50.000 0.00 0.00 0.00 3.68
3226 4134 3.627577 AGCCGATTTGCGTTGATTTCTAT 59.372 39.130 0.00 0.00 38.67 1.98
3232 4140 7.855409 CCGATTTGCGTTGATTTCTATCATAAA 59.145 33.333 0.00 0.00 37.62 1.40
3234 4142 9.722056 GATTTGCGTTGATTTCTATCATAAAGT 57.278 29.630 0.00 0.00 40.37 2.66
3253 4161 9.459640 CATAAAGTGATCTAATGGATGCTTTTG 57.540 33.333 9.62 6.28 37.40 2.44
3261 4226 4.558538 AATGGATGCTTTTGTCTATCGC 57.441 40.909 0.00 0.00 0.00 4.58
3292 4257 0.867753 GCACATAGCCGTCGTCTCTG 60.868 60.000 0.00 0.00 37.23 3.35
3294 4259 0.452184 ACATAGCCGTCGTCTCTGTG 59.548 55.000 0.00 0.00 0.00 3.66
3311 4276 0.895100 GTGGCACTGCTCAATCCCAA 60.895 55.000 11.13 0.00 0.00 4.12
3322 4287 1.627834 TCAATCCCAAATGGCCCAAAC 59.372 47.619 0.00 0.00 0.00 2.93
3353 4318 2.183478 TGGTCACGAAATCAGCATGT 57.817 45.000 0.00 0.00 37.40 3.21
3354 4319 2.503331 TGGTCACGAAATCAGCATGTT 58.497 42.857 0.00 0.00 37.40 2.71
3385 4463 5.592104 TCTAGCGGTGAGAAAATATGTCA 57.408 39.130 0.00 0.00 0.00 3.58
3386 4464 6.161855 TCTAGCGGTGAGAAAATATGTCAT 57.838 37.500 0.00 0.00 33.34 3.06
3420 4498 4.142945 GCTCTGTAGTTCTGTTCATTGCTG 60.143 45.833 0.00 0.00 0.00 4.41
3438 4516 4.093743 TGCTGTAACCAAGTCTGGATCTA 58.906 43.478 0.00 0.00 46.92 1.98
3440 4518 4.680975 GCTGTAACCAAGTCTGGATCTACC 60.681 50.000 0.00 0.00 46.92 3.18
3475 4555 7.986889 TGCATAGTGTGACATAGTACAATCAAT 59.013 33.333 0.00 0.00 0.00 2.57
3516 4596 1.601166 CATCGATCCACATGGTGCAT 58.399 50.000 0.00 0.00 36.34 3.96
3542 4626 3.799755 GTCGACCCCATGTTGCGC 61.800 66.667 3.51 0.00 0.00 6.09
3554 4638 0.392060 TGTTGCGCTGAGATGAGCAT 60.392 50.000 9.73 0.00 41.89 3.79
3555 4639 1.134729 TGTTGCGCTGAGATGAGCATA 60.135 47.619 9.73 0.00 41.89 3.14
3556 4640 2.141517 GTTGCGCTGAGATGAGCATAT 58.858 47.619 9.73 0.00 41.89 1.78
3557 4641 3.243839 TGTTGCGCTGAGATGAGCATATA 60.244 43.478 9.73 0.00 41.89 0.86
3581 4665 0.028902 GAACGTGCGACTGGCTTTTT 59.971 50.000 0.00 0.00 44.05 1.94
3608 4692 1.160329 AGATATGCGGAAAGTGCGGC 61.160 55.000 0.00 0.00 34.24 6.53
3632 4716 0.394565 ATTCTCGATGTAGGGCCTGC 59.605 55.000 18.53 16.90 0.00 4.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
132 133 9.698617 GAAAAAGCTTATCACGTATACGAAAAT 57.301 29.630 30.77 20.44 43.02 1.82
133 134 8.928733 AGAAAAAGCTTATCACGTATACGAAAA 58.071 29.630 30.77 15.43 43.02 2.29
134 135 8.470040 AGAAAAAGCTTATCACGTATACGAAA 57.530 30.769 30.77 17.83 43.02 3.46
135 136 8.377681 CAAGAAAAAGCTTATCACGTATACGAA 58.622 33.333 30.77 18.17 43.02 3.85
136 137 7.756272 TCAAGAAAAAGCTTATCACGTATACGA 59.244 33.333 30.77 10.74 43.02 3.43
137 138 7.891782 TCAAGAAAAAGCTTATCACGTATACG 58.108 34.615 23.24 23.24 46.33 3.06
140 141 9.601217 AGTATCAAGAAAAAGCTTATCACGTAT 57.399 29.630 0.00 0.00 0.00 3.06
141 142 8.997621 AGTATCAAGAAAAAGCTTATCACGTA 57.002 30.769 0.00 0.00 0.00 3.57
142 143 7.907214 AGTATCAAGAAAAAGCTTATCACGT 57.093 32.000 0.00 0.00 0.00 4.49
176 177 9.712305 TGAAAATTGTTAACCAAGAAGTTGAAA 57.288 25.926 2.48 0.00 36.25 2.69
177 178 9.712305 TTGAAAATTGTTAACCAAGAAGTTGAA 57.288 25.926 2.48 0.00 36.25 2.69
178 179 9.712305 TTTGAAAATTGTTAACCAAGAAGTTGA 57.288 25.926 2.48 0.00 36.25 3.18
179 180 9.971744 CTTTGAAAATTGTTAACCAAGAAGTTG 57.028 29.630 2.48 0.00 36.25 3.16
180 181 9.719355 ACTTTGAAAATTGTTAACCAAGAAGTT 57.281 25.926 2.48 0.00 36.25 2.66
268 269 9.388506 TCTTGTTTTCCATTTTTGCTTTATTCA 57.611 25.926 0.00 0.00 0.00 2.57
272 273 8.171840 CGTTTCTTGTTTTCCATTTTTGCTTTA 58.828 29.630 0.00 0.00 0.00 1.85
273 274 7.020602 CGTTTCTTGTTTTCCATTTTTGCTTT 58.979 30.769 0.00 0.00 0.00 3.51
274 275 6.148645 ACGTTTCTTGTTTTCCATTTTTGCTT 59.851 30.769 0.00 0.00 0.00 3.91
275 276 5.641636 ACGTTTCTTGTTTTCCATTTTTGCT 59.358 32.000 0.00 0.00 0.00 3.91
276 277 5.732185 CACGTTTCTTGTTTTCCATTTTTGC 59.268 36.000 0.00 0.00 0.00 3.68
277 278 7.054855 TCACGTTTCTTGTTTTCCATTTTTG 57.945 32.000 0.00 0.00 0.00 2.44
278 279 7.171678 TGTTCACGTTTCTTGTTTTCCATTTTT 59.828 29.630 0.00 0.00 0.00 1.94
279 280 6.647067 TGTTCACGTTTCTTGTTTTCCATTTT 59.353 30.769 0.00 0.00 0.00 1.82
280 281 6.159988 TGTTCACGTTTCTTGTTTTCCATTT 58.840 32.000 0.00 0.00 0.00 2.32
281 282 5.715070 TGTTCACGTTTCTTGTTTTCCATT 58.285 33.333 0.00 0.00 0.00 3.16
282 283 5.124776 TCTGTTCACGTTTCTTGTTTTCCAT 59.875 36.000 0.00 0.00 0.00 3.41
283 284 4.456222 TCTGTTCACGTTTCTTGTTTTCCA 59.544 37.500 0.00 0.00 0.00 3.53
284 285 4.976987 TCTGTTCACGTTTCTTGTTTTCC 58.023 39.130 0.00 0.00 0.00 3.13
285 286 6.921332 TTTCTGTTCACGTTTCTTGTTTTC 57.079 33.333 0.00 0.00 0.00 2.29
286 287 7.701809 TTTTTCTGTTCACGTTTCTTGTTTT 57.298 28.000 0.00 0.00 0.00 2.43
287 288 7.883229 ATTTTTCTGTTCACGTTTCTTGTTT 57.117 28.000 0.00 0.00 0.00 2.83
288 289 8.455682 TCTATTTTTCTGTTCACGTTTCTTGTT 58.544 29.630 0.00 0.00 0.00 2.83
289 290 7.981142 TCTATTTTTCTGTTCACGTTTCTTGT 58.019 30.769 0.00 0.00 0.00 3.16
290 291 8.835467 TTCTATTTTTCTGTTCACGTTTCTTG 57.165 30.769 0.00 0.00 0.00 3.02
291 292 9.849166 TTTTCTATTTTTCTGTTCACGTTTCTT 57.151 25.926 0.00 0.00 0.00 2.52
292 293 9.849166 TTTTTCTATTTTTCTGTTCACGTTTCT 57.151 25.926 0.00 0.00 0.00 2.52
311 312 8.603304 GGGAGGCCATAGTCTAATATTTTTCTA 58.397 37.037 5.01 0.00 0.00 2.10
312 313 7.073725 TGGGAGGCCATAGTCTAATATTTTTCT 59.926 37.037 5.01 0.00 0.00 2.52
313 314 7.231467 TGGGAGGCCATAGTCTAATATTTTTC 58.769 38.462 5.01 0.00 0.00 2.29
314 315 7.161715 TGGGAGGCCATAGTCTAATATTTTT 57.838 36.000 5.01 0.00 0.00 1.94
315 316 6.780198 TGGGAGGCCATAGTCTAATATTTT 57.220 37.500 5.01 0.00 0.00 1.82
316 317 6.977244 ATGGGAGGCCATAGTCTAATATTT 57.023 37.500 5.01 0.00 0.00 1.40
317 318 6.977244 AATGGGAGGCCATAGTCTAATATT 57.023 37.500 5.01 0.00 0.00 1.28
318 319 6.725364 CAAATGGGAGGCCATAGTCTAATAT 58.275 40.000 5.01 0.00 0.00 1.28
319 320 5.514834 GCAAATGGGAGGCCATAGTCTAATA 60.515 44.000 5.01 0.00 0.00 0.98
320 321 4.751028 GCAAATGGGAGGCCATAGTCTAAT 60.751 45.833 5.01 0.00 0.00 1.73
321 322 3.435026 GCAAATGGGAGGCCATAGTCTAA 60.435 47.826 5.01 0.00 0.00 2.10
322 323 2.106511 GCAAATGGGAGGCCATAGTCTA 59.893 50.000 5.01 0.00 0.00 2.59
323 324 1.133668 GCAAATGGGAGGCCATAGTCT 60.134 52.381 5.01 0.00 0.00 3.24
324 325 1.322442 GCAAATGGGAGGCCATAGTC 58.678 55.000 5.01 0.00 0.00 2.59
325 326 0.106015 GGCAAATGGGAGGCCATAGT 60.106 55.000 5.01 0.00 46.92 2.12
326 327 2.737503 GGCAAATGGGAGGCCATAG 58.262 57.895 5.01 0.00 46.92 2.23
331 332 1.829970 GCCTAGGCAAATGGGAGGC 60.830 63.158 29.33 0.00 45.48 4.70
332 333 1.152673 GGCCTAGGCAAATGGGAGG 60.153 63.158 34.09 0.00 44.11 4.30
333 334 1.526917 CGGCCTAGGCAAATGGGAG 60.527 63.158 34.09 11.00 44.11 4.30
334 335 2.265467 GACGGCCTAGGCAAATGGGA 62.265 60.000 34.09 0.00 44.11 4.37
335 336 1.823899 GACGGCCTAGGCAAATGGG 60.824 63.158 34.09 17.27 44.11 4.00
336 337 1.823899 GGACGGCCTAGGCAAATGG 60.824 63.158 34.09 18.94 44.11 3.16
337 338 1.823899 GGGACGGCCTAGGCAAATG 60.824 63.158 34.09 21.84 44.11 2.32
338 339 1.645402 ATGGGACGGCCTAGGCAAAT 61.645 55.000 34.09 19.07 44.11 2.32
339 340 2.305607 ATGGGACGGCCTAGGCAAA 61.306 57.895 34.09 13.19 44.11 3.68
340 341 2.690881 ATGGGACGGCCTAGGCAA 60.691 61.111 34.09 12.83 44.11 4.52
341 342 3.479203 CATGGGACGGCCTAGGCA 61.479 66.667 34.09 14.02 44.11 4.75
342 343 4.937431 GCATGGGACGGCCTAGGC 62.937 72.222 26.55 26.55 45.01 3.93
343 344 4.256180 GGCATGGGACGGCCTAGG 62.256 72.222 7.57 2.99 46.02 3.02
351 352 3.799755 GCGTGAACGGCATGGGAC 61.800 66.667 4.84 0.00 40.23 4.46
354 355 3.853330 CTCGCGTGAACGGCATGG 61.853 66.667 5.77 0.00 40.23 3.66
355 356 3.853330 CCTCGCGTGAACGGCATG 61.853 66.667 10.21 0.00 40.23 4.06
359 360 3.411351 CAACCCTCGCGTGAACGG 61.411 66.667 10.21 9.62 40.23 4.44
360 361 4.072088 GCAACCCTCGCGTGAACG 62.072 66.667 10.21 0.00 43.27 3.95
361 362 2.775032 TAGGCAACCCTCGCGTGAAC 62.775 60.000 10.21 0.00 41.75 3.18
362 363 2.575893 TAGGCAACCCTCGCGTGAA 61.576 57.895 10.21 0.00 41.75 3.18
363 364 2.992689 TAGGCAACCCTCGCGTGA 60.993 61.111 10.21 0.00 41.75 4.35
364 365 2.813908 GTAGGCAACCCTCGCGTG 60.814 66.667 5.77 2.75 41.75 5.34
365 366 4.430765 CGTAGGCAACCCTCGCGT 62.431 66.667 5.77 0.00 41.75 6.01
366 367 4.430765 ACGTAGGCAACCCTCGCG 62.431 66.667 0.00 0.00 41.75 5.87
367 368 2.508663 GACGTAGGCAACCCTCGC 60.509 66.667 0.00 0.00 41.75 5.03
368 369 1.139095 GAGACGTAGGCAACCCTCG 59.861 63.158 0.00 0.00 41.75 4.63
369 370 1.139095 CGAGACGTAGGCAACCCTC 59.861 63.158 0.00 0.00 41.75 4.30
370 371 0.683504 ATCGAGACGTAGGCAACCCT 60.684 55.000 0.00 0.00 45.61 4.34
371 372 1.027357 TATCGAGACGTAGGCAACCC 58.973 55.000 0.00 0.00 37.17 4.11
372 373 4.225208 GTTATATCGAGACGTAGGCAACC 58.775 47.826 0.00 0.00 37.17 3.77
373 374 4.225208 GGTTATATCGAGACGTAGGCAAC 58.775 47.826 0.00 0.00 0.00 4.17
374 375 3.058708 CGGTTATATCGAGACGTAGGCAA 60.059 47.826 0.00 0.00 0.00 4.52
375 376 2.481568 CGGTTATATCGAGACGTAGGCA 59.518 50.000 0.00 0.00 0.00 4.75
376 377 2.738846 TCGGTTATATCGAGACGTAGGC 59.261 50.000 0.00 0.00 32.51 3.93
385 386 4.581409 TCCACAATGTCTCGGTTATATCGA 59.419 41.667 0.00 0.00 35.24 3.59
386 387 4.680110 GTCCACAATGTCTCGGTTATATCG 59.320 45.833 0.00 0.00 0.00 2.92
387 388 4.989168 GGTCCACAATGTCTCGGTTATATC 59.011 45.833 0.00 0.00 0.00 1.63
388 389 4.202326 GGGTCCACAATGTCTCGGTTATAT 60.202 45.833 0.00 0.00 0.00 0.86
389 390 3.133362 GGGTCCACAATGTCTCGGTTATA 59.867 47.826 0.00 0.00 0.00 0.98
390 391 2.093128 GGGTCCACAATGTCTCGGTTAT 60.093 50.000 0.00 0.00 0.00 1.89
391 392 1.276989 GGGTCCACAATGTCTCGGTTA 59.723 52.381 0.00 0.00 0.00 2.85
392 393 0.036306 GGGTCCACAATGTCTCGGTT 59.964 55.000 0.00 0.00 0.00 4.44
393 394 1.677552 GGGTCCACAATGTCTCGGT 59.322 57.895 0.00 0.00 0.00 4.69
394 395 1.078426 GGGGTCCACAATGTCTCGG 60.078 63.158 0.00 0.00 0.00 4.63
395 396 0.108138 GAGGGGTCCACAATGTCTCG 60.108 60.000 0.00 0.00 0.00 4.04
396 397 0.253327 GGAGGGGTCCACAATGTCTC 59.747 60.000 0.00 0.00 0.00 3.36
397 398 0.178861 AGGAGGGGTCCACAATGTCT 60.179 55.000 0.00 0.00 0.00 3.41
398 399 0.698818 AAGGAGGGGTCCACAATGTC 59.301 55.000 0.00 0.00 0.00 3.06
399 400 0.698818 GAAGGAGGGGTCCACAATGT 59.301 55.000 0.00 0.00 0.00 2.71
400 401 0.995024 AGAAGGAGGGGTCCACAATG 59.005 55.000 0.00 0.00 0.00 2.82
401 402 0.995024 CAGAAGGAGGGGTCCACAAT 59.005 55.000 0.00 0.00 0.00 2.71
402 403 1.133809 CCAGAAGGAGGGGTCCACAA 61.134 60.000 0.00 0.00 36.89 3.33
403 404 1.538876 CCAGAAGGAGGGGTCCACA 60.539 63.158 0.00 0.00 36.89 4.17
404 405 2.972819 GCCAGAAGGAGGGGTCCAC 61.973 68.421 0.00 0.00 36.89 4.02
405 406 2.610859 GCCAGAAGGAGGGGTCCA 60.611 66.667 0.00 0.00 36.89 4.02
406 407 3.787001 CGCCAGAAGGAGGGGTCC 61.787 72.222 0.00 0.00 36.89 4.46
407 408 4.475135 GCGCCAGAAGGAGGGGTC 62.475 72.222 0.00 0.00 40.86 4.46
409 410 3.801997 ATGCGCCAGAAGGAGGGG 61.802 66.667 4.18 0.00 41.62 4.79
410 411 2.515523 CATGCGCCAGAAGGAGGG 60.516 66.667 4.18 0.00 36.89 4.30
411 412 3.207669 GCATGCGCCAGAAGGAGG 61.208 66.667 4.18 0.00 36.89 4.30
412 413 3.570638 CGCATGCGCCAGAAGGAG 61.571 66.667 29.09 0.00 36.89 3.69
422 423 4.088762 GTGTGACACCCGCATGCG 62.089 66.667 32.60 32.60 37.64 4.73
423 424 2.462255 CTTGTGTGACACCCGCATGC 62.462 60.000 13.85 7.91 37.64 4.06
424 425 1.575922 CTTGTGTGACACCCGCATG 59.424 57.895 13.85 0.00 37.64 4.06
425 426 1.600636 CCTTGTGTGACACCCGCAT 60.601 57.895 13.85 0.00 37.64 4.73
426 427 2.203139 CCTTGTGTGACACCCGCA 60.203 61.111 13.85 0.00 32.73 5.69
427 428 2.978010 CCCTTGTGTGACACCCGC 60.978 66.667 13.85 0.00 32.73 6.13
428 429 1.153046 AACCCTTGTGTGACACCCG 60.153 57.895 13.85 3.85 32.73 5.28
429 430 0.822121 GGAACCCTTGTGTGACACCC 60.822 60.000 13.85 1.04 32.73 4.61
430 431 2.715536 GGAACCCTTGTGTGACACC 58.284 57.895 13.85 0.00 32.73 4.16
450 451 0.753262 CCGTATGTTCCCCTGAGAGG 59.247 60.000 0.00 0.00 34.30 3.69
451 452 0.105039 GCCGTATGTTCCCCTGAGAG 59.895 60.000 0.00 0.00 0.00 3.20
452 453 1.672854 CGCCGTATGTTCCCCTGAGA 61.673 60.000 0.00 0.00 0.00 3.27
453 454 1.227263 CGCCGTATGTTCCCCTGAG 60.227 63.158 0.00 0.00 0.00 3.35
454 455 2.727392 CCGCCGTATGTTCCCCTGA 61.727 63.158 0.00 0.00 0.00 3.86
455 456 2.203015 CCGCCGTATGTTCCCCTG 60.203 66.667 0.00 0.00 0.00 4.45
456 457 0.977108 TAACCGCCGTATGTTCCCCT 60.977 55.000 0.00 0.00 0.00 4.79
457 458 0.107268 ATAACCGCCGTATGTTCCCC 59.893 55.000 0.00 0.00 0.00 4.81
458 459 1.600485 CAATAACCGCCGTATGTTCCC 59.400 52.381 0.00 0.00 0.00 3.97
459 460 2.031191 CACAATAACCGCCGTATGTTCC 59.969 50.000 0.00 0.00 0.00 3.62
460 461 2.031191 CCACAATAACCGCCGTATGTTC 59.969 50.000 0.00 0.00 0.00 3.18
461 462 2.011222 CCACAATAACCGCCGTATGTT 58.989 47.619 0.00 0.00 0.00 2.71
462 463 1.065998 ACCACAATAACCGCCGTATGT 60.066 47.619 0.00 0.00 0.00 2.29
463 464 1.595794 GACCACAATAACCGCCGTATG 59.404 52.381 0.00 0.00 0.00 2.39
464 465 1.473788 GGACCACAATAACCGCCGTAT 60.474 52.381 0.00 0.00 0.00 3.06
465 466 0.108233 GGACCACAATAACCGCCGTA 60.108 55.000 0.00 0.00 0.00 4.02
466 467 1.376295 GGACCACAATAACCGCCGT 60.376 57.895 0.00 0.00 0.00 5.68
467 468 0.956410 TTGGACCACAATAACCGCCG 60.956 55.000 0.00 0.00 33.18 6.46
468 469 0.524414 GTTGGACCACAATAACCGCC 59.476 55.000 0.00 0.00 41.95 6.13
469 470 0.167251 CGTTGGACCACAATAACCGC 59.833 55.000 0.00 0.00 41.95 5.68
470 471 1.798283 TCGTTGGACCACAATAACCG 58.202 50.000 0.00 0.00 41.95 4.44
471 472 4.571372 TTTTCGTTGGACCACAATAACC 57.429 40.909 0.00 0.00 41.95 2.85
472 473 4.384547 GCATTTTCGTTGGACCACAATAAC 59.615 41.667 0.00 0.00 41.95 1.89
473 474 4.038042 TGCATTTTCGTTGGACCACAATAA 59.962 37.500 0.00 0.00 41.95 1.40
474 475 3.570125 TGCATTTTCGTTGGACCACAATA 59.430 39.130 0.00 0.00 41.95 1.90
475 476 2.363680 TGCATTTTCGTTGGACCACAAT 59.636 40.909 0.00 0.00 41.95 2.71
476 477 1.751351 TGCATTTTCGTTGGACCACAA 59.249 42.857 0.00 0.00 36.54 3.33
477 478 1.393603 TGCATTTTCGTTGGACCACA 58.606 45.000 0.00 0.00 0.00 4.17
478 479 2.500509 TTGCATTTTCGTTGGACCAC 57.499 45.000 0.00 0.00 0.00 4.16
479 480 3.118956 AGTTTTGCATTTTCGTTGGACCA 60.119 39.130 0.00 0.00 0.00 4.02
480 481 3.453424 AGTTTTGCATTTTCGTTGGACC 58.547 40.909 0.00 0.00 0.00 4.46
481 482 4.821012 CAAGTTTTGCATTTTCGTTGGAC 58.179 39.130 0.00 0.00 0.00 4.02
495 496 7.092716 AGCTCTAAATATGTTGGCAAGTTTTG 58.907 34.615 0.00 1.87 0.00 2.44
496 497 7.232118 AGCTCTAAATATGTTGGCAAGTTTT 57.768 32.000 0.00 1.24 0.00 2.43
497 498 6.127619 GGAGCTCTAAATATGTTGGCAAGTTT 60.128 38.462 14.64 2.82 0.00 2.66
498 499 5.358160 GGAGCTCTAAATATGTTGGCAAGTT 59.642 40.000 14.64 0.00 0.00 2.66
499 500 4.884164 GGAGCTCTAAATATGTTGGCAAGT 59.116 41.667 14.64 0.00 0.00 3.16
500 501 4.276926 GGGAGCTCTAAATATGTTGGCAAG 59.723 45.833 14.64 0.00 0.00 4.01
501 502 4.207165 GGGAGCTCTAAATATGTTGGCAA 58.793 43.478 14.64 0.00 0.00 4.52
502 503 3.201930 TGGGAGCTCTAAATATGTTGGCA 59.798 43.478 14.64 0.00 0.00 4.92
503 504 3.820557 TGGGAGCTCTAAATATGTTGGC 58.179 45.455 14.64 0.00 0.00 4.52
535 536 7.923414 ACGGAGTATTATGAAAGCTCTTTTT 57.077 32.000 0.00 0.00 41.94 1.94
554 555 4.758674 TCTTATATTACGGGACTGACGGAG 59.241 45.833 0.00 0.00 35.23 4.63
555 556 4.717877 TCTTATATTACGGGACTGACGGA 58.282 43.478 0.00 0.00 35.23 4.69
556 557 4.615452 GCTCTTATATTACGGGACTGACGG 60.615 50.000 0.00 0.00 35.23 4.79
557 558 4.023450 TGCTCTTATATTACGGGACTGACG 60.023 45.833 0.00 0.00 37.36 4.35
558 559 5.449107 TGCTCTTATATTACGGGACTGAC 57.551 43.478 0.00 0.00 0.00 3.51
559 560 6.665992 AATGCTCTTATATTACGGGACTGA 57.334 37.500 0.00 0.00 0.00 3.41
560 561 8.873830 CATAAATGCTCTTATATTACGGGACTG 58.126 37.037 0.00 0.00 0.00 3.51
561 562 8.812972 TCATAAATGCTCTTATATTACGGGACT 58.187 33.333 0.00 0.00 0.00 3.85
562 563 8.870879 GTCATAAATGCTCTTATATTACGGGAC 58.129 37.037 0.00 0.00 0.00 4.46
563 564 8.590204 TGTCATAAATGCTCTTATATTACGGGA 58.410 33.333 0.00 0.00 0.00 5.14
564 565 8.656849 GTGTCATAAATGCTCTTATATTACGGG 58.343 37.037 0.00 0.00 0.00 5.28
565 566 9.424319 AGTGTCATAAATGCTCTTATATTACGG 57.576 33.333 0.00 0.00 0.00 4.02
572 573 9.935241 CACCTATAGTGTCATAAATGCTCTTAT 57.065 33.333 0.00 0.00 41.93 1.73
589 590 1.436336 GCACGGTCGCACCTATAGT 59.564 57.895 0.00 0.00 35.66 2.12
590 591 1.657487 CGCACGGTCGCACCTATAG 60.657 63.158 0.00 0.00 35.66 1.31
591 592 2.055310 CTCGCACGGTCGCACCTATA 62.055 60.000 4.21 0.00 35.66 1.31
592 593 3.411418 CTCGCACGGTCGCACCTAT 62.411 63.158 4.21 0.00 35.66 2.57
593 594 4.111016 CTCGCACGGTCGCACCTA 62.111 66.667 4.21 0.00 35.66 3.08
605 606 5.635280 GCATCTTATTATACTTGCTCTCGCA 59.365 40.000 0.00 0.00 46.24 5.10
606 607 5.635280 TGCATCTTATTATACTTGCTCTCGC 59.365 40.000 0.00 0.00 0.00 5.03
607 608 7.383572 AGTTGCATCTTATTATACTTGCTCTCG 59.616 37.037 0.00 0.00 0.00 4.04
608 609 8.600449 AGTTGCATCTTATTATACTTGCTCTC 57.400 34.615 0.00 0.00 0.00 3.20
609 610 8.970859 AAGTTGCATCTTATTATACTTGCTCT 57.029 30.769 8.28 0.00 0.00 4.09
610 611 9.443283 CAAAGTTGCATCTTATTATACTTGCTC 57.557 33.333 10.37 0.00 0.00 4.26
611 612 8.960591 ACAAAGTTGCATCTTATTATACTTGCT 58.039 29.630 10.37 0.00 0.00 3.91
612 613 9.226345 GACAAAGTTGCATCTTATTATACTTGC 57.774 33.333 10.37 0.00 0.00 4.01
620 621 9.399797 TCATCTATGACAAAGTTGCATCTTATT 57.600 29.630 10.37 0.97 0.00 1.40
621 622 8.969260 TCATCTATGACAAAGTTGCATCTTAT 57.031 30.769 10.37 2.57 0.00 1.73
622 623 8.260114 TCTCATCTATGACAAAGTTGCATCTTA 58.740 33.333 10.37 0.00 32.50 2.10
623 624 7.108194 TCTCATCTATGACAAAGTTGCATCTT 58.892 34.615 4.13 4.13 32.50 2.40
624 625 6.647229 TCTCATCTATGACAAAGTTGCATCT 58.353 36.000 0.00 0.00 32.50 2.90
625 626 6.915544 TCTCATCTATGACAAAGTTGCATC 57.084 37.500 0.00 0.00 32.50 3.91
626 627 7.281098 AGATCTCATCTATGACAAAGTTGCAT 58.719 34.615 0.00 6.32 38.00 3.96
647 648 9.399403 CAACTTGCCTTTTCTTTACTAAAGATC 57.601 33.333 11.30 0.00 46.15 2.75
650 651 8.406297 AGACAACTTGCCTTTTCTTTACTAAAG 58.594 33.333 2.49 2.49 39.88 1.85
654 655 5.885912 TCAGACAACTTGCCTTTTCTTTACT 59.114 36.000 0.00 0.00 0.00 2.24
655 656 6.131544 TCAGACAACTTGCCTTTTCTTTAC 57.868 37.500 0.00 0.00 0.00 2.01
656 657 6.767524 TTCAGACAACTTGCCTTTTCTTTA 57.232 33.333 0.00 0.00 0.00 1.85
657 658 5.659440 TTCAGACAACTTGCCTTTTCTTT 57.341 34.783 0.00 0.00 0.00 2.52
658 659 5.185828 ACTTTCAGACAACTTGCCTTTTCTT 59.814 36.000 0.00 0.00 0.00 2.52
660 661 4.998788 ACTTTCAGACAACTTGCCTTTTC 58.001 39.130 0.00 0.00 0.00 2.29
668 669 6.273071 GCATTTGGTTACTTTCAGACAACTT 58.727 36.000 0.00 0.00 0.00 2.66
678 679 1.240256 TCGGCGCATTTGGTTACTTT 58.760 45.000 10.83 0.00 0.00 2.66
683 684 1.459450 ATAGTTCGGCGCATTTGGTT 58.541 45.000 10.83 0.00 0.00 3.67
696 697 1.949631 CGGCCGCCTCGAATAGTTC 60.950 63.158 14.67 0.00 0.00 3.01
715 716 6.420008 GCACGTCCTTTCGTTTGTCTATATAT 59.580 38.462 0.00 0.00 42.27 0.86
716 717 5.745294 GCACGTCCTTTCGTTTGTCTATATA 59.255 40.000 0.00 0.00 42.27 0.86
717 718 4.565564 GCACGTCCTTTCGTTTGTCTATAT 59.434 41.667 0.00 0.00 42.27 0.86
718 719 3.922240 GCACGTCCTTTCGTTTGTCTATA 59.078 43.478 0.00 0.00 42.27 1.31
719 720 2.735134 GCACGTCCTTTCGTTTGTCTAT 59.265 45.455 0.00 0.00 42.27 1.98
766 767 5.144100 TGAATTATTGTTGTTGTGGGAGGT 58.856 37.500 0.00 0.00 0.00 3.85
794 798 0.955428 GCATGGCTTCTGTCGTTGGA 60.955 55.000 0.00 0.00 0.00 3.53
821 825 0.590230 GCGGTCTCGATCTCGACTTG 60.590 60.000 0.00 5.82 44.22 3.16
836 840 3.133014 CTGGATCGATCAGGCGGT 58.867 61.111 25.93 0.00 0.00 5.68
840 844 0.533755 GGGTTGCTGGATCGATCAGG 60.534 60.000 25.93 17.78 33.16 3.86
843 847 1.144057 ACGGGTTGCTGGATCGATC 59.856 57.895 17.36 17.36 0.00 3.69
844 848 1.153369 CACGGGTTGCTGGATCGAT 60.153 57.895 0.00 0.00 0.00 3.59
845 849 2.225791 CTCACGGGTTGCTGGATCGA 62.226 60.000 0.00 0.00 0.00 3.59
846 850 1.811266 CTCACGGGTTGCTGGATCG 60.811 63.158 0.00 0.00 0.00 3.69
899 916 1.441515 CACAACGCTGTGCTGCATC 60.442 57.895 5.27 0.09 46.19 3.91
921 965 2.044555 TCTCACCCACGAGGCTACG 61.045 63.158 0.00 0.00 40.58 3.51
929 973 2.258591 CTCACGGTCTCACCCACG 59.741 66.667 0.00 0.00 33.75 4.94
940 984 0.249868 TTCAGTTGGCTGTCTCACGG 60.250 55.000 0.00 0.00 43.05 4.94
941 985 1.143305 CTTCAGTTGGCTGTCTCACG 58.857 55.000 0.00 0.00 43.05 4.35
942 986 0.871057 GCTTCAGTTGGCTGTCTCAC 59.129 55.000 0.00 0.00 43.05 3.51
943 987 0.601046 CGCTTCAGTTGGCTGTCTCA 60.601 55.000 0.00 0.00 43.05 3.27
944 988 1.905922 GCGCTTCAGTTGGCTGTCTC 61.906 60.000 0.00 0.00 43.05 3.36
945 989 1.963338 GCGCTTCAGTTGGCTGTCT 60.963 57.895 0.00 0.00 43.05 3.41
946 990 2.558313 GCGCTTCAGTTGGCTGTC 59.442 61.111 0.00 0.00 43.05 3.51
947 991 3.349006 CGCGCTTCAGTTGGCTGT 61.349 61.111 5.56 0.00 43.05 4.40
948 992 4.748679 GCGCGCTTCAGTTGGCTG 62.749 66.667 26.67 0.00 43.87 4.85
994 1038 1.053424 GGCAACGACCCCATCCTATA 58.947 55.000 0.00 0.00 0.00 1.31
995 1039 1.837090 GGCAACGACCCCATCCTAT 59.163 57.895 0.00 0.00 0.00 2.57
1275 1326 2.355244 GAGTAGATCAGCGCGGGC 60.355 66.667 17.92 17.92 40.37 6.13
1338 1389 0.967887 CCTCAGCCTCCTCGTTGAGA 60.968 60.000 4.28 0.00 39.46 3.27
1546 1597 7.378181 ACAAGAGAAACACAACAAAACAAGAT 58.622 30.769 0.00 0.00 0.00 2.40
1547 1598 6.744112 ACAAGAGAAACACAACAAAACAAGA 58.256 32.000 0.00 0.00 0.00 3.02
1548 1599 7.406799 AACAAGAGAAACACAACAAAACAAG 57.593 32.000 0.00 0.00 0.00 3.16
1551 1602 8.072238 AGAAAACAAGAGAAACACAACAAAAC 57.928 30.769 0.00 0.00 0.00 2.43
1553 1604 8.655651 AAAGAAAACAAGAGAAACACAACAAA 57.344 26.923 0.00 0.00 0.00 2.83
1555 1606 7.923344 TCAAAAGAAAACAAGAGAAACACAACA 59.077 29.630 0.00 0.00 0.00 3.33
1556 1607 8.293114 TCAAAAGAAAACAAGAGAAACACAAC 57.707 30.769 0.00 0.00 0.00 3.32
1557 1608 8.879342 TTCAAAAGAAAACAAGAGAAACACAA 57.121 26.923 0.00 0.00 0.00 3.33
1559 1610 8.520835 ACTTCAAAAGAAAACAAGAGAAACAC 57.479 30.769 0.00 0.00 0.00 3.32
1565 1616 9.665264 GGTACATACTTCAAAAGAAAACAAGAG 57.335 33.333 0.00 0.00 0.00 2.85
1567 1618 9.450807 CTGGTACATACTTCAAAAGAAAACAAG 57.549 33.333 0.00 0.00 38.20 3.16
1568 1619 8.410141 CCTGGTACATACTTCAAAAGAAAACAA 58.590 33.333 0.00 0.00 38.20 2.83
1569 1620 7.558444 ACCTGGTACATACTTCAAAAGAAAACA 59.442 33.333 0.00 0.00 38.20 2.83
1570 1621 7.937649 ACCTGGTACATACTTCAAAAGAAAAC 58.062 34.615 0.00 0.00 38.20 2.43
1571 1622 7.041644 CGACCTGGTACATACTTCAAAAGAAAA 60.042 37.037 0.00 0.00 38.20 2.29
1575 1668 5.235516 ACGACCTGGTACATACTTCAAAAG 58.764 41.667 0.00 0.00 38.20 2.27
1577 1670 4.877378 ACGACCTGGTACATACTTCAAA 57.123 40.909 0.00 0.00 38.20 2.69
1590 1697 2.401766 GGCATGCAGAACGACCTGG 61.402 63.158 21.36 0.00 34.82 4.45
1593 1700 1.448985 TTTAGGCATGCAGAACGACC 58.551 50.000 21.36 0.00 0.00 4.79
1600 1707 2.164827 TGCAACAGATTTAGGCATGCAG 59.835 45.455 21.36 0.84 37.40 4.41
1606 1713 4.708726 ATCAGTTGCAACAGATTTAGGC 57.291 40.909 30.11 0.04 32.08 3.93
1654 1771 7.761409 TGCCATCAGTTGAATTGTTCTATAAC 58.239 34.615 0.00 0.00 36.07 1.89
1671 1845 6.441093 ACTTGTATGTAATGTTGCCATCAG 57.559 37.500 0.00 0.00 0.00 2.90
1703 1917 3.854784 GCCTCTTCTGCATCAACAACAAC 60.855 47.826 0.00 0.00 0.00 3.32
1713 1927 1.949547 GCAACTGAGCCTCTTCTGCAT 60.950 52.381 7.36 0.00 0.00 3.96
1733 1947 1.327460 CGTGTCCAAGTATCCATTGCG 59.673 52.381 0.00 0.00 0.00 4.85
1823 2037 0.537188 ATGATGTCGTCAGGGTCCAC 59.463 55.000 0.50 0.00 40.92 4.02
1824 2038 0.536724 CATGATGTCGTCAGGGTCCA 59.463 55.000 0.50 0.00 40.92 4.02
1834 2048 5.596268 TGAAGAAGTTGAACATGATGTCG 57.404 39.130 0.00 0.00 0.00 4.35
2215 2429 1.300620 CTTGACGTCGCCCTTGACA 60.301 57.895 11.62 0.00 38.84 3.58
2591 2805 4.351938 CCTTCCGTCACGCCGTGA 62.352 66.667 17.22 17.22 40.50 4.35
2655 2869 5.799827 TTTACCAGCCTAATTTGCTTGTT 57.200 34.783 10.36 0.00 36.81 2.83
2668 2884 3.862845 CGCCAAACATTTATTTACCAGCC 59.137 43.478 0.00 0.00 0.00 4.85
2678 2894 4.142988 CGCTTTAGACTCGCCAAACATTTA 60.143 41.667 0.00 0.00 0.00 1.40
2679 2895 3.364964 CGCTTTAGACTCGCCAAACATTT 60.365 43.478 0.00 0.00 0.00 2.32
2696 2917 9.836076 GATTGGTTACTTCTTAATAAACGCTTT 57.164 29.630 0.00 0.00 0.00 3.51
2712 2933 5.536497 AAAATGGAGAGGGATTGGTTACT 57.464 39.130 0.00 0.00 0.00 2.24
2734 2956 4.892934 ACCCAAAACATGACTGAAGCTTTA 59.107 37.500 0.00 0.00 0.00 1.85
2755 2977 7.990886 TCTTGGTAATCCATGTAAGTTATCACC 59.009 37.037 0.00 0.00 43.91 4.02
2789 3011 8.149647 TCCAAAGTAGTATTTCAACCGTCTTTA 58.850 33.333 0.00 0.00 0.00 1.85
2804 3026 9.953565 ATAAAGCTACAAATGTCCAAAGTAGTA 57.046 29.630 0.00 0.00 35.71 1.82
2805 3027 8.863872 ATAAAGCTACAAATGTCCAAAGTAGT 57.136 30.769 0.00 0.00 35.71 2.73
2806 3028 9.774742 GAATAAAGCTACAAATGTCCAAAGTAG 57.225 33.333 0.00 0.00 36.22 2.57
2846 3068 7.816513 CAGTACACATCCTACATTATGAGATGG 59.183 40.741 19.80 14.22 38.89 3.51
2847 3069 8.363390 ACAGTACACATCCTACATTATGAGATG 58.637 37.037 16.62 16.62 40.12 2.90
2848 3070 8.484214 ACAGTACACATCCTACATTATGAGAT 57.516 34.615 0.00 0.00 0.00 2.75
2851 3073 7.654022 TGACAGTACACATCCTACATTATGA 57.346 36.000 0.00 0.00 0.00 2.15
2859 3081 4.986034 CGTTGTTTGACAGTACACATCCTA 59.014 41.667 0.00 0.00 0.00 2.94
2861 3083 3.558418 ACGTTGTTTGACAGTACACATCC 59.442 43.478 0.00 0.00 0.00 3.51
2870 3106 1.013596 TGCAGGACGTTGTTTGACAG 58.986 50.000 0.00 0.00 0.00 3.51
2878 3114 1.670811 GTCCCATAATGCAGGACGTTG 59.329 52.381 6.34 0.00 40.65 4.10
2884 3120 1.597742 CCTTCGTCCCATAATGCAGG 58.402 55.000 0.00 0.00 0.00 4.85
2885 3121 1.140852 TCCCTTCGTCCCATAATGCAG 59.859 52.381 0.00 0.00 0.00 4.41
2886 3122 1.140852 CTCCCTTCGTCCCATAATGCA 59.859 52.381 0.00 0.00 0.00 3.96
2887 3123 1.141053 ACTCCCTTCGTCCCATAATGC 59.859 52.381 0.00 0.00 0.00 3.56
2888 3124 4.283467 TCATACTCCCTTCGTCCCATAATG 59.717 45.833 0.00 0.00 0.00 1.90
2889 3125 4.489737 TCATACTCCCTTCGTCCCATAAT 58.510 43.478 0.00 0.00 0.00 1.28
2890 3126 3.918566 TCATACTCCCTTCGTCCCATAA 58.081 45.455 0.00 0.00 0.00 1.90
2891 3127 3.605726 TCATACTCCCTTCGTCCCATA 57.394 47.619 0.00 0.00 0.00 2.74
2892 3128 2.471815 TCATACTCCCTTCGTCCCAT 57.528 50.000 0.00 0.00 0.00 4.00
2893 3129 2.471815 ATCATACTCCCTTCGTCCCA 57.528 50.000 0.00 0.00 0.00 4.37
2894 3130 3.840124 AAATCATACTCCCTTCGTCCC 57.160 47.619 0.00 0.00 0.00 4.46
2895 3131 5.048507 GTGTAAATCATACTCCCTTCGTCC 58.951 45.833 0.00 0.00 0.00 4.79
2896 3132 5.903810 AGTGTAAATCATACTCCCTTCGTC 58.096 41.667 0.00 0.00 0.00 4.20
2897 3133 5.934402 AGTGTAAATCATACTCCCTTCGT 57.066 39.130 0.00 0.00 0.00 3.85
2898 3134 6.696148 GTGTAGTGTAAATCATACTCCCTTCG 59.304 42.308 0.00 0.00 30.25 3.79
2899 3135 6.696148 CGTGTAGTGTAAATCATACTCCCTTC 59.304 42.308 0.00 0.00 30.25 3.46
2900 3136 6.406624 CCGTGTAGTGTAAATCATACTCCCTT 60.407 42.308 0.00 0.00 30.25 3.95
2921 3157 4.748102 ACTTGGCGTATAATAACATCCGTG 59.252 41.667 0.00 0.00 0.00 4.94
2923 3159 6.809689 TGATACTTGGCGTATAATAACATCCG 59.190 38.462 0.00 0.00 38.90 4.18
2941 3177 8.739972 GGGTGTTGATGAGTATTTTTGATACTT 58.260 33.333 0.72 0.00 35.20 2.24
2946 3182 5.389520 TGGGGTGTTGATGAGTATTTTTGA 58.610 37.500 0.00 0.00 0.00 2.69
2949 3185 6.933514 ATTTGGGGTGTTGATGAGTATTTT 57.066 33.333 0.00 0.00 0.00 1.82
2955 3191 6.017934 CGAAGTATATTTGGGGTGTTGATGAG 60.018 42.308 0.00 0.00 0.00 2.90
2958 3194 4.578928 GCGAAGTATATTTGGGGTGTTGAT 59.421 41.667 0.00 0.00 0.00 2.57
2959 3195 3.942748 GCGAAGTATATTTGGGGTGTTGA 59.057 43.478 0.00 0.00 0.00 3.18
2972 3208 6.588756 CCAACACTGAGTAAAAGCGAAGTATA 59.411 38.462 0.00 0.00 0.00 1.47
2990 3226 2.487265 GGATGTCCAGTCAACCAACACT 60.487 50.000 0.00 0.00 35.64 3.55
3004 3240 2.636768 CTTTTGAAAGCGGGATGTCC 57.363 50.000 0.00 0.00 0.00 4.02
3029 3265 6.399639 AACAACCAGTTCATTATTTCGGTT 57.600 33.333 0.00 0.00 34.74 4.44
3037 3273 5.129634 TGCTCAGAAACAACCAGTTCATTA 58.870 37.500 0.00 0.00 40.26 1.90
3038 3274 3.953612 TGCTCAGAAACAACCAGTTCATT 59.046 39.130 0.00 0.00 40.26 2.57
3045 3281 1.490490 ACTCCTGCTCAGAAACAACCA 59.510 47.619 0.00 0.00 0.00 3.67
3046 3282 2.262423 ACTCCTGCTCAGAAACAACC 57.738 50.000 0.00 0.00 0.00 3.77
3081 3317 1.076024 AGTTGCATGGTTGGTCCTCAT 59.924 47.619 0.00 0.00 37.07 2.90
3097 3333 7.281100 GTCTACCCATCTTTCTATCCAAAGTTG 59.719 40.741 0.00 0.00 35.25 3.16
3127 3363 2.475155 TGATCATGAGTTCCAGAGCCT 58.525 47.619 0.09 0.00 0.00 4.58
3161 3404 2.758979 AGTTCCGTATGTGATTCGAGGT 59.241 45.455 0.00 0.00 0.00 3.85
3165 3408 4.970611 CAGAGTAGTTCCGTATGTGATTCG 59.029 45.833 0.00 0.00 0.00 3.34
3171 3414 2.823747 TGTGCAGAGTAGTTCCGTATGT 59.176 45.455 0.00 0.00 0.00 2.29
3176 3419 0.240145 TCGTGTGCAGAGTAGTTCCG 59.760 55.000 0.00 0.00 0.00 4.30
3177 3420 1.000607 TGTCGTGTGCAGAGTAGTTCC 60.001 52.381 0.00 0.00 0.00 3.62
3184 3427 2.983136 CTCTAAACTGTCGTGTGCAGAG 59.017 50.000 0.00 0.00 37.40 3.35
3185 3428 2.862530 GCTCTAAACTGTCGTGTGCAGA 60.863 50.000 0.00 0.00 37.40 4.26
3206 4103 5.155509 TGATAGAAATCAACGCAAATCGG 57.844 39.130 0.00 0.00 39.20 4.18
3226 4134 8.985315 AAAGCATCCATTAGATCACTTTATGA 57.015 30.769 0.00 0.00 43.13 2.15
3232 4140 6.421485 AGACAAAAGCATCCATTAGATCACT 58.579 36.000 0.00 0.00 30.59 3.41
3234 4142 7.386025 CGATAGACAAAAGCATCCATTAGATCA 59.614 37.037 0.00 0.00 39.76 2.92
3253 4161 2.847254 GCACAATTTCTGCGCGATAGAC 60.847 50.000 12.10 0.00 39.76 2.59
3261 4226 2.179589 GCTATGTGCACAATTTCTGCG 58.820 47.619 25.72 7.10 42.31 5.18
3292 4257 0.895100 TTGGGATTGAGCAGTGCCAC 60.895 55.000 12.58 7.24 38.19 5.01
3294 4259 1.134907 CATTTGGGATTGAGCAGTGCC 60.135 52.381 12.58 3.92 0.00 5.01
3311 4276 2.390225 TGGTTACAGTTTGGGCCATT 57.610 45.000 7.26 0.00 0.00 3.16
3353 4318 4.014406 TCTCACCGCTAGATTCTGTACAA 58.986 43.478 0.00 0.00 0.00 2.41
3354 4319 3.617284 TCTCACCGCTAGATTCTGTACA 58.383 45.455 0.00 0.00 0.00 2.90
3385 4463 7.831193 ACAGAACTACAGAGCCATATGAAAAAT 59.169 33.333 3.65 0.00 0.00 1.82
3386 4464 7.168219 ACAGAACTACAGAGCCATATGAAAAA 58.832 34.615 3.65 0.00 0.00 1.94
3438 4516 2.130193 ACACTATGCATGGGAGATGGT 58.870 47.619 15.11 1.32 0.00 3.55
3440 4518 3.136763 GTCACACTATGCATGGGAGATG 58.863 50.000 15.11 5.96 27.51 2.90
3475 4555 0.694771 ATCTTGGAGGCACTTGCTCA 59.305 50.000 0.38 0.00 41.55 4.26
3510 4590 2.461110 CGACGGCCAACTATGCACC 61.461 63.158 2.24 0.00 0.00 5.01
3516 4596 3.384532 GGGGTCGACGGCCAACTA 61.385 66.667 21.93 0.00 0.00 2.24
3542 4626 7.909641 CACGTTCTCTATATATGCTCATCTCAG 59.090 40.741 0.00 0.00 0.00 3.35
3554 4638 3.058432 GCCAGTCGCACGTTCTCTATATA 60.058 47.826 0.00 0.00 37.47 0.86
3555 4639 2.287668 GCCAGTCGCACGTTCTCTATAT 60.288 50.000 0.00 0.00 37.47 0.86
3556 4640 1.065102 GCCAGTCGCACGTTCTCTATA 59.935 52.381 0.00 0.00 37.47 1.31
3557 4641 0.179134 GCCAGTCGCACGTTCTCTAT 60.179 55.000 0.00 0.00 37.47 1.98
3581 4665 5.064707 GCACTTTCCGCATATCTCTGTTAAA 59.935 40.000 0.00 0.00 0.00 1.52
3608 4692 3.322254 AGGCCCTACATCGAGAATTACAG 59.678 47.826 0.00 0.00 0.00 2.74


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.