Multiple sequence alignment - TraesCS4A01G435600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G435600 chr4A 100.000 3301 0 0 1 3301 705631681 705634981 0.000000e+00 6096.0
1 TraesCS4A01G435600 chr4A 97.872 47 0 1 458 503 714067237 714067191 2.730000e-11 80.5
2 TraesCS4A01G435600 chr7D 91.549 2130 107 36 759 2855 22631590 22629501 0.000000e+00 2868.0
3 TraesCS4A01G435600 chr7D 85.507 345 29 7 107 450 22632301 22631977 1.130000e-89 340.0
4 TraesCS4A01G435600 chr7D 100.000 31 0 0 2332 2362 338011908 338011878 1.280000e-04 58.4
5 TraesCS4A01G435600 chr7A 91.061 2148 101 43 747 2858 22982903 22980811 0.000000e+00 2819.0
6 TraesCS4A01G435600 chr7A 83.398 259 34 6 1 250 22983720 22983462 7.120000e-57 231.0
7 TraesCS4A01G435600 chr7A 83.142 261 27 10 520 776 22983184 22982937 4.290000e-54 222.0
8 TraesCS4A01G435600 chr7A 91.818 110 8 1 2854 2963 80206442 80206334 5.710000e-33 152.0
9 TraesCS4A01G435600 chr7A 94.444 36 1 1 2335 2369 380755558 380755523 2.000000e-03 54.7
10 TraesCS4A01G435600 chr2B 90.909 110 9 1 2854 2963 439913853 439913961 2.650000e-31 147.0
11 TraesCS4A01G435600 chr2B 90.909 110 9 1 2854 2963 439914301 439914409 2.650000e-31 147.0
12 TraesCS4A01G435600 chr2B 87.736 106 12 1 2858 2963 9631623 9631519 4.470000e-24 122.0
13 TraesCS4A01G435600 chr2B 97.872 47 1 0 457 503 17575751 17575797 7.590000e-12 82.4
14 TraesCS4A01G435600 chr2B 97.872 47 1 0 457 503 789612064 789612110 7.590000e-12 82.4
15 TraesCS4A01G435600 chr2B 96.000 50 1 1 455 503 620604836 620604787 2.730000e-11 80.5
16 TraesCS4A01G435600 chr3B 92.857 98 6 1 2863 2960 755215874 755215970 1.230000e-29 141.0
17 TraesCS4A01G435600 chr6B 90.566 106 8 1 2854 2959 11555994 11556097 4.440000e-29 139.0
18 TraesCS4A01G435600 chr3D 90.566 106 9 1 2855 2960 474816674 474816570 4.440000e-29 139.0
19 TraesCS4A01G435600 chr3D 86.301 73 7 3 3059 3129 156218037 156217966 3.530000e-10 76.8
20 TraesCS4A01G435600 chr1A 87.273 110 13 1 2854 2963 532547276 532547168 1.240000e-24 124.0
21 TraesCS4A01G435600 chr1A 77.473 182 32 9 3058 3235 583936892 583937068 2.100000e-17 100.0
22 TraesCS4A01G435600 chr4B 79.213 178 35 2 541 717 580565713 580565537 4.470000e-24 122.0
23 TraesCS4A01G435600 chr4B 96.154 52 2 0 452 503 15599781 15599832 5.870000e-13 86.1
24 TraesCS4A01G435600 chr4B 100.000 45 0 0 461 505 421856048 421856092 2.110000e-12 84.2
25 TraesCS4A01G435600 chr4B 96.970 33 1 0 500 532 645892714 645892682 4.600000e-04 56.5
26 TraesCS4A01G435600 chr1D 79.661 177 31 5 3061 3233 486247361 486247186 4.470000e-24 122.0
27 TraesCS4A01G435600 chr1D 86.364 110 14 1 2854 2963 434499286 434499394 5.790000e-23 119.0
28 TraesCS4A01G435600 chr1D 90.000 70 7 0 3060 3129 365087235 365087304 1.260000e-14 91.6
29 TraesCS4A01G435600 chr1D 81.416 113 17 4 3048 3159 486246105 486246214 4.540000e-14 89.8
30 TraesCS4A01G435600 chr2D 97.917 48 0 1 457 503 572376318 572376365 7.590000e-12 82.4
31 TraesCS4A01G435600 chr2D 94.872 39 1 1 3065 3103 127838667 127838704 3.560000e-05 60.2
32 TraesCS4A01G435600 chr1B 97.872 47 1 0 457 503 613327631 613327677 7.590000e-12 82.4
33 TraesCS4A01G435600 chr5B 91.525 59 4 1 464 522 638835628 638835571 2.730000e-11 80.5
34 TraesCS4A01G435600 chr6D 100.000 31 0 0 2332 2362 229348419 229348389 1.280000e-04 58.4
35 TraesCS4A01G435600 chr6D 100.000 29 0 0 2334 2362 200401909 200401937 2.000000e-03 54.7
36 TraesCS4A01G435600 chr6D 92.105 38 2 1 2325 2362 203856059 203856023 6.000000e-03 52.8
37 TraesCS4A01G435600 chr3A 100.000 30 0 0 2334 2363 243339912 243339941 4.600000e-04 56.5
38 TraesCS4A01G435600 chrUn 100.000 29 0 0 2335 2363 247251431 247251459 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G435600 chr4A 705631681 705634981 3300 False 6096.000000 6096 100.000 1 3301 1 chr4A.!!$F1 3300
1 TraesCS4A01G435600 chr7D 22629501 22632301 2800 True 1604.000000 2868 88.528 107 2855 2 chr7D.!!$R2 2748
2 TraesCS4A01G435600 chr7A 22980811 22983720 2909 True 1090.666667 2819 85.867 1 2858 3 chr7A.!!$R3 2857

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
875 1132 0.031314 CAGATGACGACATAGGCGCT 59.969 55.0 7.64 0.0 36.82 5.92 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2802 3113 0.112412 TCCACCAAGCCTTTCTTCCC 59.888 55.0 0.0 0.0 31.27 3.97 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
47 48 5.422666 TTTATGACTTCTGCACTTGTGTG 57.577 39.130 2.61 0.00 46.37 3.82
78 79 6.268797 GCAAGTATGTCAATTGCATCAATG 57.731 37.500 15.57 13.59 46.64 2.82
80 81 6.020121 GCAAGTATGTCAATTGCATCAATGTC 60.020 38.462 15.57 8.28 46.64 3.06
87 90 6.260493 TGTCAATTGCATCAATGTCATCGATA 59.740 34.615 0.00 0.00 34.04 2.92
100 103 8.867935 CAATGTCATCGATAATTCTCCATCTAC 58.132 37.037 0.00 0.00 0.00 2.59
104 107 7.693120 GTCATCGATAATTCTCCATCTACGTAC 59.307 40.741 0.00 0.00 0.00 3.67
105 108 7.389607 TCATCGATAATTCTCCATCTACGTACA 59.610 37.037 0.00 0.00 0.00 2.90
106 109 7.500720 TCGATAATTCTCCATCTACGTACAA 57.499 36.000 0.00 0.00 0.00 2.41
116 123 4.034048 CCATCTACGTACAAAAGTGGCATC 59.966 45.833 0.00 0.00 0.00 3.91
118 125 5.648178 TCTACGTACAAAAGTGGCATCTA 57.352 39.130 0.00 0.00 0.00 1.98
140 147 9.656323 ATCTAATATACTTGTACTTCACCTGGA 57.344 33.333 0.00 0.00 0.00 3.86
203 213 4.038282 TGATGCATCTCTTTTTGCTTGTGT 59.962 37.500 26.32 0.00 39.60 3.72
236 247 2.879103 AGTGTATGGGTCTGTTTGGG 57.121 50.000 0.00 0.00 0.00 4.12
241 252 0.112412 ATGGGTCTGTTTGGGTGGAC 59.888 55.000 0.00 0.00 0.00 4.02
291 302 1.000506 GCTGATAATTGGCATGCCCTG 59.999 52.381 33.44 20.07 34.56 4.45
331 406 0.750546 GAGATAACCAAACGGCCCCC 60.751 60.000 0.00 0.00 0.00 5.40
334 409 0.927767 ATAACCAAACGGCCCCCATA 59.072 50.000 0.00 0.00 0.00 2.74
355 433 6.477688 CCATATGTTTTGATGCAACTGGATTC 59.522 38.462 1.24 0.00 0.00 2.52
377 455 1.726265 GCACCTTGCAGCATCTAGC 59.274 57.895 0.00 0.00 44.26 3.42
390 468 1.108776 ATCTAGCGAGCAAACCCGTA 58.891 50.000 0.00 0.00 0.00 4.02
417 495 3.536956 AGCGACAATATTTCCCTTCGA 57.463 42.857 0.00 0.00 0.00 3.71
431 509 2.284798 CTTCGAAGCCTGCTAGCCGA 62.285 60.000 13.09 9.86 0.00 5.54
450 528 4.261197 GCCGAGACAACAGAAAATGAAACT 60.261 41.667 0.00 0.00 0.00 2.66
452 530 5.207768 CGAGACAACAGAAAATGAAACTGG 58.792 41.667 0.00 0.00 0.00 4.00
455 533 5.067805 AGACAACAGAAAATGAAACTGGTCC 59.932 40.000 0.00 0.00 0.00 4.46
456 534 4.099419 ACAACAGAAAATGAAACTGGTCCC 59.901 41.667 0.00 0.00 0.00 4.46
457 535 4.184649 ACAGAAAATGAAACTGGTCCCT 57.815 40.909 0.00 0.00 0.00 4.20
459 537 4.962362 ACAGAAAATGAAACTGGTCCCTTT 59.038 37.500 0.00 0.00 0.00 3.11
460 538 5.425217 ACAGAAAATGAAACTGGTCCCTTTT 59.575 36.000 0.00 0.00 0.00 2.27
461 539 6.609616 ACAGAAAATGAAACTGGTCCCTTTTA 59.390 34.615 0.00 0.00 0.00 1.52
462 540 6.923508 CAGAAAATGAAACTGGTCCCTTTTAC 59.076 38.462 0.00 0.00 0.00 2.01
463 541 6.839134 AGAAAATGAAACTGGTCCCTTTTACT 59.161 34.615 0.00 0.00 0.00 2.24
464 542 6.650427 AAATGAAACTGGTCCCTTTTACTC 57.350 37.500 0.00 0.00 0.00 2.59
465 543 4.094830 TGAAACTGGTCCCTTTTACTCC 57.905 45.455 0.00 0.00 0.00 3.85
466 544 3.181437 TGAAACTGGTCCCTTTTACTCCC 60.181 47.826 0.00 0.00 0.00 4.30
467 545 2.435203 ACTGGTCCCTTTTACTCCCT 57.565 50.000 0.00 0.00 0.00 4.20
468 546 2.267192 ACTGGTCCCTTTTACTCCCTC 58.733 52.381 0.00 0.00 0.00 4.30
469 547 1.560146 CTGGTCCCTTTTACTCCCTCC 59.440 57.143 0.00 0.00 0.00 4.30
470 548 0.540454 GGTCCCTTTTACTCCCTCCG 59.460 60.000 0.00 0.00 0.00 4.63
471 549 1.273759 GTCCCTTTTACTCCCTCCGT 58.726 55.000 0.00 0.00 0.00 4.69
472 550 1.206610 GTCCCTTTTACTCCCTCCGTC 59.793 57.143 0.00 0.00 0.00 4.79
473 551 0.540454 CCCTTTTACTCCCTCCGTCC 59.460 60.000 0.00 0.00 0.00 4.79
474 552 0.175073 CCTTTTACTCCCTCCGTCCG 59.825 60.000 0.00 0.00 0.00 4.79
475 553 1.180029 CTTTTACTCCCTCCGTCCGA 58.820 55.000 0.00 0.00 0.00 4.55
476 554 1.547372 CTTTTACTCCCTCCGTCCGAA 59.453 52.381 0.00 0.00 0.00 4.30
477 555 1.631405 TTTACTCCCTCCGTCCGAAA 58.369 50.000 0.00 0.00 0.00 3.46
478 556 1.631405 TTACTCCCTCCGTCCGAAAA 58.369 50.000 0.00 0.00 0.00 2.29
479 557 1.856629 TACTCCCTCCGTCCGAAAAT 58.143 50.000 0.00 0.00 0.00 1.82
480 558 1.856629 ACTCCCTCCGTCCGAAAATA 58.143 50.000 0.00 0.00 0.00 1.40
481 559 1.479730 ACTCCCTCCGTCCGAAAATAC 59.520 52.381 0.00 0.00 0.00 1.89
482 560 1.755380 CTCCCTCCGTCCGAAAATACT 59.245 52.381 0.00 0.00 0.00 2.12
483 561 2.167900 CTCCCTCCGTCCGAAAATACTT 59.832 50.000 0.00 0.00 0.00 2.24
484 562 2.093869 TCCCTCCGTCCGAAAATACTTG 60.094 50.000 0.00 0.00 0.00 3.16
485 563 2.354403 CCCTCCGTCCGAAAATACTTGT 60.354 50.000 0.00 0.00 0.00 3.16
486 564 2.928116 CCTCCGTCCGAAAATACTTGTC 59.072 50.000 0.00 0.00 0.00 3.18
487 565 2.597305 CTCCGTCCGAAAATACTTGTCG 59.403 50.000 0.00 0.00 34.58 4.35
495 573 5.143916 CGAAAATACTTGTCGGAGGAATG 57.856 43.478 0.00 0.00 0.00 2.67
496 574 4.034048 CGAAAATACTTGTCGGAGGAATGG 59.966 45.833 0.00 0.00 0.00 3.16
497 575 4.837093 AAATACTTGTCGGAGGAATGGA 57.163 40.909 0.00 0.00 0.00 3.41
498 576 5.373812 AAATACTTGTCGGAGGAATGGAT 57.626 39.130 0.00 0.00 0.00 3.41
499 577 2.698855 ACTTGTCGGAGGAATGGATG 57.301 50.000 0.00 0.00 0.00 3.51
500 578 1.909302 ACTTGTCGGAGGAATGGATGT 59.091 47.619 0.00 0.00 0.00 3.06
501 579 3.104512 ACTTGTCGGAGGAATGGATGTA 58.895 45.455 0.00 0.00 0.00 2.29
502 580 3.711704 ACTTGTCGGAGGAATGGATGTAT 59.288 43.478 0.00 0.00 0.00 2.29
503 581 4.164221 ACTTGTCGGAGGAATGGATGTATT 59.836 41.667 0.00 0.00 0.00 1.89
504 582 4.771114 TGTCGGAGGAATGGATGTATTT 57.229 40.909 0.00 0.00 0.00 1.40
505 583 4.703897 TGTCGGAGGAATGGATGTATTTC 58.296 43.478 0.00 0.00 0.00 2.17
506 584 4.065789 GTCGGAGGAATGGATGTATTTCC 58.934 47.826 0.00 0.00 36.24 3.13
507 585 3.067106 CGGAGGAATGGATGTATTTCCG 58.933 50.000 0.00 0.00 38.74 4.30
508 586 3.412386 GGAGGAATGGATGTATTTCCGG 58.588 50.000 0.00 0.00 38.74 5.14
509 587 3.072476 GGAGGAATGGATGTATTTCCGGA 59.928 47.826 0.00 0.00 38.74 5.14
510 588 4.065789 GAGGAATGGATGTATTTCCGGAC 58.934 47.826 1.83 0.00 38.74 4.79
511 589 2.806244 GGAATGGATGTATTTCCGGACG 59.194 50.000 1.83 0.00 38.74 4.79
512 590 2.543777 ATGGATGTATTTCCGGACGG 57.456 50.000 1.83 3.96 38.74 4.79
513 591 1.487300 TGGATGTATTTCCGGACGGA 58.513 50.000 1.83 9.76 43.52 4.69
514 592 1.411246 TGGATGTATTTCCGGACGGAG 59.589 52.381 13.64 0.00 46.06 4.63
515 593 1.270147 GGATGTATTTCCGGACGGAGG 60.270 57.143 13.64 0.00 46.06 4.30
516 594 0.756903 ATGTATTTCCGGACGGAGGG 59.243 55.000 13.64 0.00 46.06 4.30
517 595 0.324552 TGTATTTCCGGACGGAGGGA 60.325 55.000 13.64 4.95 46.06 4.20
518 596 0.388294 GTATTTCCGGACGGAGGGAG 59.612 60.000 13.64 0.00 46.06 4.30
526 604 1.878734 CGGACGGAGGGAGTAGATAAC 59.121 57.143 0.00 0.00 0.00 1.89
533 611 4.686396 CGGAGGGAGTAGATAACAGAGTCA 60.686 50.000 0.00 0.00 0.00 3.41
534 612 5.202004 GGAGGGAGTAGATAACAGAGTCAA 58.798 45.833 0.00 0.00 0.00 3.18
571 649 2.684881 GACATCTTCATGAAATGCGGGT 59.315 45.455 20.87 10.62 46.21 5.28
587 665 1.933853 CGGGTACTCATAAGCAGCAAC 59.066 52.381 0.00 0.00 0.00 4.17
593 671 5.106157 GGTACTCATAAGCAGCAACAACATT 60.106 40.000 0.00 0.00 0.00 2.71
595 673 5.942872 ACTCATAAGCAGCAACAACATTAC 58.057 37.500 0.00 0.00 0.00 1.89
601 679 4.062293 AGCAGCAACAACATTACTCGTAA 58.938 39.130 0.00 0.00 0.00 3.18
712 860 9.997482 AAATAATATTAAAGGTTACACTGCACG 57.003 29.630 0.00 0.00 0.00 5.34
719 867 4.062677 AGGTTACACTGCACGAACTAAA 57.937 40.909 0.00 0.00 0.00 1.85
728 876 5.178623 CACTGCACGAACTAAAATGGACTTA 59.821 40.000 0.00 0.00 0.00 2.24
731 879 7.604927 ACTGCACGAACTAAAATGGACTTATTA 59.395 33.333 0.00 0.00 0.00 0.98
798 1055 2.092323 GGATACTTTTCCTGGTGCACC 58.908 52.381 29.67 29.67 32.68 5.01
810 1067 3.476552 CTGGTGCACCAAGAAGAAACTA 58.523 45.455 36.71 11.78 46.97 2.24
817 1074 7.279981 GGTGCACCAAGAAGAAACTAAAAATTT 59.720 33.333 31.23 0.00 35.64 1.82
841 1098 0.113190 CTCACTCCCAAAAAGGCCCT 59.887 55.000 0.00 0.00 35.39 5.19
844 1101 0.178932 ACTCCCAAAAAGGCCCTTCC 60.179 55.000 0.00 0.00 35.39 3.46
859 1116 0.178992 CTTCCCAGCCCAACAACAGA 60.179 55.000 0.00 0.00 0.00 3.41
861 1118 0.251297 TCCCAGCCCAACAACAGATG 60.251 55.000 0.00 0.00 0.00 2.90
862 1119 0.251297 CCCAGCCCAACAACAGATGA 60.251 55.000 0.00 0.00 0.00 2.92
863 1120 0.883833 CCAGCCCAACAACAGATGAC 59.116 55.000 0.00 0.00 0.00 3.06
871 1128 3.618594 CCAACAACAGATGACGACATAGG 59.381 47.826 0.00 0.00 36.82 2.57
875 1132 0.031314 CAGATGACGACATAGGCGCT 59.969 55.000 7.64 0.00 36.82 5.92
905 1163 0.808755 CGTCCTAAGCCCGCAAAATT 59.191 50.000 0.00 0.00 0.00 1.82
913 1171 1.963515 AGCCCGCAAAATTTGTCTTCT 59.036 42.857 7.60 0.00 0.00 2.85
917 1175 4.929211 GCCCGCAAAATTTGTCTTCTATTT 59.071 37.500 7.60 0.00 0.00 1.40
1101 1368 2.203998 CACCACCACCTCCTCCCT 60.204 66.667 0.00 0.00 0.00 4.20
1134 1401 4.772231 AGGTCCTTCGCGCCCCTA 62.772 66.667 0.00 0.00 0.00 3.53
1334 1610 3.126225 GCCAGTGCTCTGCTCTGC 61.126 66.667 10.32 4.78 45.23 4.26
1335 1611 2.663796 CCAGTGCTCTGCTCTGCT 59.336 61.111 10.32 0.00 45.23 4.24
1336 1612 1.448189 CCAGTGCTCTGCTCTGCTC 60.448 63.158 10.32 0.00 45.23 4.26
1337 1613 1.592743 CAGTGCTCTGCTCTGCTCT 59.407 57.895 2.32 0.00 41.87 4.09
1338 1614 0.738063 CAGTGCTCTGCTCTGCTCTG 60.738 60.000 2.32 10.91 41.87 3.35
1345 1621 0.108233 CTGCTCTGCTCTGTTCCCTC 60.108 60.000 0.00 0.00 0.00 4.30
1380 1656 0.872388 AATTCTCGGCCACAAACGAC 59.128 50.000 2.24 0.00 35.04 4.34
1383 1663 1.952133 CTCGGCCACAAACGACGAA 60.952 57.895 2.24 0.00 35.04 3.85
1389 1669 0.580104 CCACAAACGACGAACCAGAC 59.420 55.000 0.00 0.00 0.00 3.51
1393 1673 0.101040 AAACGACGAACCAGACGTGA 59.899 50.000 0.00 0.00 43.97 4.35
1416 1698 0.591659 GGGATAAGGCGGCGAAATTC 59.408 55.000 12.98 0.00 0.00 2.17
1425 1707 1.865725 CGGCGAAATTCACGTTCTTC 58.134 50.000 0.00 0.00 0.00 2.87
1427 1709 1.463528 GGCGAAATTCACGTTCTTCCG 60.464 52.381 0.00 0.00 0.00 4.30
1428 1710 1.865725 CGAAATTCACGTTCTTCCGC 58.134 50.000 0.00 0.00 0.00 5.54
1430 1712 0.110373 AAATTCACGTTCTTCCGCGC 60.110 50.000 0.00 0.00 0.00 6.86
1431 1713 2.222953 AATTCACGTTCTTCCGCGCG 62.223 55.000 25.67 25.67 0.00 6.86
1448 1730 2.802667 CGGAAATCTGCAGGTCGCG 61.803 63.158 15.13 0.00 46.97 5.87
1598 1880 2.099921 GAGCATCTTCAAGTCGGAGCTA 59.900 50.000 0.00 0.00 0.00 3.32
2292 2580 3.003763 AGTCCTTCGGGGTGAGCC 61.004 66.667 0.00 0.00 36.25 4.70
2307 2595 2.047061 TGAGCCTGTACTGAACCACTT 58.953 47.619 0.60 0.00 0.00 3.16
2317 2611 6.273071 TGTACTGAACCACTTATCATCATCG 58.727 40.000 0.00 0.00 0.00 3.84
2320 2614 4.693283 TGAACCACTTATCATCATCGTCC 58.307 43.478 0.00 0.00 0.00 4.79
2327 2621 2.109229 ATCATCATCGTCCTCCCCTT 57.891 50.000 0.00 0.00 0.00 3.95
2347 2641 0.457509 CGCCTGCAACAACAACAACA 60.458 50.000 0.00 0.00 0.00 3.33
2348 2642 1.719600 GCCTGCAACAACAACAACAA 58.280 45.000 0.00 0.00 0.00 2.83
2349 2643 1.393196 GCCTGCAACAACAACAACAAC 59.607 47.619 0.00 0.00 0.00 3.32
2350 2644 1.653114 CCTGCAACAACAACAACAACG 59.347 47.619 0.00 0.00 0.00 4.10
2351 2645 2.590073 CTGCAACAACAACAACAACGA 58.410 42.857 0.00 0.00 0.00 3.85
2352 2646 2.320367 TGCAACAACAACAACAACGAC 58.680 42.857 0.00 0.00 0.00 4.34
2466 2760 6.097356 CAGCAACTAGGATGTAGTTTACGAA 58.903 40.000 0.00 0.00 35.76 3.85
2523 2818 1.445754 CTGCTGAGACGAGTGGCAG 60.446 63.158 0.00 0.00 43.03 4.85
2635 2930 3.352648 CCCGTTTCCTATTGTGATGGTT 58.647 45.455 0.00 0.00 0.00 3.67
2636 2931 3.128589 CCCGTTTCCTATTGTGATGGTTG 59.871 47.826 0.00 0.00 0.00 3.77
2637 2932 3.427503 CCGTTTCCTATTGTGATGGTTGC 60.428 47.826 0.00 0.00 0.00 4.17
2638 2933 3.440173 CGTTTCCTATTGTGATGGTTGCT 59.560 43.478 0.00 0.00 0.00 3.91
2639 2934 4.672542 CGTTTCCTATTGTGATGGTTGCTG 60.673 45.833 0.00 0.00 0.00 4.41
2640 2935 2.368439 TCCTATTGTGATGGTTGCTGC 58.632 47.619 0.00 0.00 0.00 5.25
2653 2951 2.599659 GTTGCTGCTGCTGGTTAATTC 58.400 47.619 17.00 0.00 40.48 2.17
2668 2966 4.847757 GGTTAATTCTCGTTTTTGTACCGC 59.152 41.667 0.00 0.00 0.00 5.68
2678 2976 0.664166 TTTGTACCGCGACGAGGTTC 60.664 55.000 28.20 22.74 42.81 3.62
2713 3011 4.887071 ACCTTAGCACATTGTTTCTGAACA 59.113 37.500 0.00 0.00 43.73 3.18
2714 3012 5.009010 ACCTTAGCACATTGTTTCTGAACAG 59.991 40.000 0.00 0.00 45.80 3.16
2716 3014 4.558538 AGCACATTGTTTCTGAACAGAC 57.441 40.909 3.88 0.00 45.80 3.51
2721 3019 4.580580 ACATTGTTTCTGAACAGACCCTTC 59.419 41.667 3.88 0.00 45.80 3.46
2722 3020 4.503714 TTGTTTCTGAACAGACCCTTCT 57.496 40.909 3.88 0.00 45.80 2.85
2723 3021 5.623956 TTGTTTCTGAACAGACCCTTCTA 57.376 39.130 3.88 0.00 45.80 2.10
2724 3022 5.825593 TGTTTCTGAACAGACCCTTCTAT 57.174 39.130 3.88 0.00 40.71 1.98
2725 3023 6.928348 TGTTTCTGAACAGACCCTTCTATA 57.072 37.500 3.88 0.00 40.71 1.31
2726 3024 6.936279 TGTTTCTGAACAGACCCTTCTATAG 58.064 40.000 3.88 0.00 40.71 1.31
2727 3025 6.497259 TGTTTCTGAACAGACCCTTCTATAGT 59.503 38.462 3.88 0.00 40.71 2.12
2728 3026 6.531503 TTCTGAACAGACCCTTCTATAGTG 57.468 41.667 3.88 0.00 37.14 2.74
2729 3027 5.580998 TCTGAACAGACCCTTCTATAGTGT 58.419 41.667 0.00 0.00 31.41 3.55
2730 3028 6.017192 TCTGAACAGACCCTTCTATAGTGTT 58.983 40.000 0.00 1.17 31.41 3.32
2774 3085 8.228035 TGTGGTAGCTTAAAATTTGTACTTGT 57.772 30.769 0.00 0.00 0.00 3.16
2802 3113 7.757173 TCATTTCTCTTGTCTCTGATACGAAAG 59.243 37.037 0.00 0.00 0.00 2.62
2805 3116 4.341487 TCTTGTCTCTGATACGAAAGGGA 58.659 43.478 0.00 0.00 0.00 4.20
2855 3170 5.815581 TGGCAGAGTTAAAATCCATACAGT 58.184 37.500 0.00 0.00 0.00 3.55
2856 3171 5.647658 TGGCAGAGTTAAAATCCATACAGTG 59.352 40.000 0.00 0.00 0.00 3.66
2857 3172 5.880332 GGCAGAGTTAAAATCCATACAGTGA 59.120 40.000 0.00 0.00 0.00 3.41
2858 3173 6.037610 GGCAGAGTTAAAATCCATACAGTGAG 59.962 42.308 0.00 0.00 0.00 3.51
2859 3174 6.457528 GCAGAGTTAAAATCCATACAGTGAGC 60.458 42.308 0.00 0.00 0.00 4.26
2860 3175 6.037610 CAGAGTTAAAATCCATACAGTGAGCC 59.962 42.308 0.00 0.00 0.00 4.70
2861 3176 4.876107 AGTTAAAATCCATACAGTGAGCCG 59.124 41.667 0.00 0.00 0.00 5.52
2862 3177 3.627395 AAAATCCATACAGTGAGCCGA 57.373 42.857 0.00 0.00 0.00 5.54
2863 3178 2.898729 AATCCATACAGTGAGCCGAG 57.101 50.000 0.00 0.00 0.00 4.63
2864 3179 0.390860 ATCCATACAGTGAGCCGAGC 59.609 55.000 0.00 0.00 0.00 5.03
2865 3180 0.684479 TCCATACAGTGAGCCGAGCT 60.684 55.000 0.00 0.00 43.88 4.09
2874 3189 3.151906 AGCCGAGCTCAACTGGTT 58.848 55.556 15.40 1.39 30.62 3.67
2875 3190 1.302033 AGCCGAGCTCAACTGGTTG 60.302 57.895 15.40 7.10 41.71 3.77
2876 3191 2.328099 GCCGAGCTCAACTGGTTGG 61.328 63.158 15.40 5.07 40.78 3.77
2877 3192 1.672356 CCGAGCTCAACTGGTTGGG 60.672 63.158 15.40 10.80 43.71 4.12
2878 3193 1.672356 CGAGCTCAACTGGTTGGGG 60.672 63.158 15.40 8.58 41.25 4.96
2879 3194 1.303643 GAGCTCAACTGGTTGGGGG 60.304 63.158 9.40 6.57 41.25 5.40
2897 3212 4.353383 GGGGGAGTAGATGTACAAATCC 57.647 50.000 0.00 1.34 0.00 3.01
2898 3213 3.714798 GGGGGAGTAGATGTACAAATCCA 59.285 47.826 13.04 0.00 0.00 3.41
2899 3214 4.165372 GGGGGAGTAGATGTACAAATCCAA 59.835 45.833 13.04 0.00 0.00 3.53
2900 3215 5.163088 GGGGGAGTAGATGTACAAATCCAAT 60.163 44.000 13.04 0.00 0.00 3.16
2901 3216 6.043938 GGGGGAGTAGATGTACAAATCCAATA 59.956 42.308 13.04 0.00 0.00 1.90
2902 3217 6.935208 GGGGAGTAGATGTACAAATCCAATAC 59.065 42.308 13.04 1.96 0.00 1.89
2903 3218 6.935208 GGGAGTAGATGTACAAATCCAATACC 59.065 42.308 13.04 0.00 0.00 2.73
2904 3219 7.202102 GGGAGTAGATGTACAAATCCAATACCT 60.202 40.741 13.04 0.00 0.00 3.08
2905 3220 7.657761 GGAGTAGATGTACAAATCCAATACCTG 59.342 40.741 0.00 0.00 0.00 4.00
2907 3222 5.694995 AGATGTACAAATCCAATACCTGGG 58.305 41.667 0.00 0.00 46.44 4.45
2908 3223 4.938575 TGTACAAATCCAATACCTGGGT 57.061 40.909 0.00 0.00 46.44 4.51
2910 3225 5.258051 TGTACAAATCCAATACCTGGGTTC 58.742 41.667 0.00 0.00 46.42 3.62
2911 3226 4.396357 ACAAATCCAATACCTGGGTTCA 57.604 40.909 0.00 0.00 46.42 3.18
2912 3227 4.746466 ACAAATCCAATACCTGGGTTCAA 58.254 39.130 0.00 0.00 46.42 2.69
2913 3228 5.151454 ACAAATCCAATACCTGGGTTCAAA 58.849 37.500 0.00 0.00 46.42 2.69
2914 3229 5.784906 ACAAATCCAATACCTGGGTTCAAAT 59.215 36.000 0.00 0.00 46.42 2.32
2915 3230 6.070824 ACAAATCCAATACCTGGGTTCAAATC 60.071 38.462 0.00 0.00 46.42 2.17
2916 3231 3.976015 TCCAATACCTGGGTTCAAATCC 58.024 45.455 0.00 0.00 46.44 3.01
2917 3232 3.596046 TCCAATACCTGGGTTCAAATCCT 59.404 43.478 0.00 0.00 46.44 3.24
2918 3233 3.954258 CCAATACCTGGGTTCAAATCCTC 59.046 47.826 0.00 0.00 42.17 3.71
2919 3234 4.569653 CCAATACCTGGGTTCAAATCCTCA 60.570 45.833 0.00 0.00 42.17 3.86
2920 3235 5.203528 CAATACCTGGGTTCAAATCCTCAT 58.796 41.667 0.00 0.00 0.00 2.90
2921 3236 3.091633 ACCTGGGTTCAAATCCTCATG 57.908 47.619 0.00 0.00 0.00 3.07
2922 3237 2.291800 ACCTGGGTTCAAATCCTCATGG 60.292 50.000 0.00 0.00 0.00 3.66
2924 3239 3.285484 CTGGGTTCAAATCCTCATGGAG 58.715 50.000 0.00 0.00 46.91 3.86
2925 3240 2.918934 TGGGTTCAAATCCTCATGGAGA 59.081 45.455 0.00 0.00 46.91 3.71
2926 3241 3.282885 GGGTTCAAATCCTCATGGAGAC 58.717 50.000 0.00 0.00 46.91 3.36
2927 3242 2.939103 GGTTCAAATCCTCATGGAGACG 59.061 50.000 0.00 0.00 46.91 4.18
2928 3243 3.369471 GGTTCAAATCCTCATGGAGACGA 60.369 47.826 0.00 0.00 46.91 4.20
2929 3244 4.253685 GTTCAAATCCTCATGGAGACGAA 58.746 43.478 0.00 0.00 46.91 3.85
2930 3245 4.760530 TCAAATCCTCATGGAGACGAAT 57.239 40.909 0.00 0.00 46.91 3.34
2931 3246 5.102953 TCAAATCCTCATGGAGACGAATT 57.897 39.130 0.00 0.00 46.91 2.17
2932 3247 5.500234 TCAAATCCTCATGGAGACGAATTT 58.500 37.500 0.00 0.00 46.91 1.82
2933 3248 6.649155 TCAAATCCTCATGGAGACGAATTTA 58.351 36.000 0.00 0.00 46.91 1.40
2934 3249 6.763135 TCAAATCCTCATGGAGACGAATTTAG 59.237 38.462 0.00 0.00 46.91 1.85
2935 3250 6.485830 AATCCTCATGGAGACGAATTTAGA 57.514 37.500 0.00 0.00 46.91 2.10
2936 3251 6.678568 ATCCTCATGGAGACGAATTTAGAT 57.321 37.500 0.00 0.00 46.91 1.98
2937 3252 6.485830 TCCTCATGGAGACGAATTTAGATT 57.514 37.500 0.00 0.00 37.46 2.40
2938 3253 6.516718 TCCTCATGGAGACGAATTTAGATTC 58.483 40.000 0.00 0.00 37.46 2.52
2939 3254 5.698545 CCTCATGGAGACGAATTTAGATTCC 59.301 44.000 0.66 0.00 35.83 3.01
2940 3255 6.463614 CCTCATGGAGACGAATTTAGATTCCT 60.464 42.308 0.66 0.00 35.83 3.36
2941 3256 7.255977 CCTCATGGAGACGAATTTAGATTCCTA 60.256 40.741 0.66 0.00 35.83 2.94
2942 3257 8.195165 TCATGGAGACGAATTTAGATTCCTAT 57.805 34.615 0.66 0.00 38.76 2.57
2943 3258 8.651389 TCATGGAGACGAATTTAGATTCCTATT 58.349 33.333 0.66 0.00 38.76 1.73
2944 3259 9.277783 CATGGAGACGAATTTAGATTCCTATTT 57.722 33.333 0.66 0.00 38.76 1.40
2958 3273 8.337118 AGATTCCTATTTATTCTTGAGGACCA 57.663 34.615 0.00 0.00 36.04 4.02
2959 3274 8.435982 AGATTCCTATTTATTCTTGAGGACCAG 58.564 37.037 0.00 0.00 36.04 4.00
2960 3275 7.749377 TTCCTATTTATTCTTGAGGACCAGA 57.251 36.000 0.00 0.00 36.04 3.86
2961 3276 7.125792 TCCTATTTATTCTTGAGGACCAGAC 57.874 40.000 0.00 0.00 31.25 3.51
2962 3277 6.903534 TCCTATTTATTCTTGAGGACCAGACT 59.096 38.462 0.00 0.00 31.25 3.24
2963 3278 6.989169 CCTATTTATTCTTGAGGACCAGACTG 59.011 42.308 0.00 0.00 0.00 3.51
2964 3279 4.826274 TTATTCTTGAGGACCAGACTGG 57.174 45.455 20.45 20.45 45.02 4.00
2965 3280 1.352083 TTCTTGAGGACCAGACTGGG 58.648 55.000 25.34 7.84 43.37 4.45
2966 3281 0.487325 TCTTGAGGACCAGACTGGGA 59.513 55.000 25.34 8.26 43.37 4.37
2967 3282 1.132849 TCTTGAGGACCAGACTGGGAA 60.133 52.381 25.34 8.78 43.37 3.97
2968 3283 1.699634 CTTGAGGACCAGACTGGGAAA 59.300 52.381 25.34 10.58 43.37 3.13
2969 3284 1.352083 TGAGGACCAGACTGGGAAAG 58.648 55.000 25.34 0.10 43.37 2.62
2970 3285 1.353091 GAGGACCAGACTGGGAAAGT 58.647 55.000 25.34 3.66 43.37 2.66
2971 3286 1.002544 GAGGACCAGACTGGGAAAGTG 59.997 57.143 25.34 0.00 43.37 3.16
2972 3287 0.036875 GGACCAGACTGGGAAAGTGG 59.963 60.000 25.34 0.00 43.37 4.00
2973 3288 1.056660 GACCAGACTGGGAAAGTGGA 58.943 55.000 25.34 0.00 43.37 4.02
2974 3289 1.420138 GACCAGACTGGGAAAGTGGAA 59.580 52.381 25.34 0.00 43.37 3.53
2975 3290 2.040412 GACCAGACTGGGAAAGTGGAAT 59.960 50.000 25.34 0.00 43.37 3.01
2976 3291 2.447047 ACCAGACTGGGAAAGTGGAATT 59.553 45.455 25.34 0.00 43.37 2.17
2977 3292 3.084786 CCAGACTGGGAAAGTGGAATTC 58.915 50.000 14.26 0.00 40.07 2.17
2978 3293 3.245052 CCAGACTGGGAAAGTGGAATTCT 60.245 47.826 14.26 0.00 40.07 2.40
2979 3294 4.006319 CAGACTGGGAAAGTGGAATTCTC 58.994 47.826 5.23 0.00 40.07 2.87
2980 3295 3.009584 AGACTGGGAAAGTGGAATTCTCC 59.990 47.826 5.23 3.81 40.07 3.71
2981 3296 2.041755 ACTGGGAAAGTGGAATTCTCCC 59.958 50.000 18.57 18.57 45.24 4.30
2982 3297 1.357761 TGGGAAAGTGGAATTCTCCCC 59.642 52.381 21.22 14.82 44.53 4.81
2983 3298 1.342076 GGGAAAGTGGAATTCTCCCCC 60.342 57.143 15.74 9.66 41.64 5.40
2984 3299 1.357761 GGAAAGTGGAATTCTCCCCCA 59.642 52.381 5.23 0.00 41.64 4.96
2985 3300 2.621668 GGAAAGTGGAATTCTCCCCCAG 60.622 54.545 5.23 0.00 41.64 4.45
2986 3301 1.760405 AAGTGGAATTCTCCCCCAGT 58.240 50.000 5.23 0.00 41.64 4.00
2987 3302 1.760405 AGTGGAATTCTCCCCCAGTT 58.240 50.000 5.23 0.00 41.64 3.16
2988 3303 2.073776 AGTGGAATTCTCCCCCAGTTT 58.926 47.619 5.23 0.00 41.64 2.66
2989 3304 3.265489 AGTGGAATTCTCCCCCAGTTTA 58.735 45.455 5.23 0.00 41.64 2.01
2990 3305 3.660669 AGTGGAATTCTCCCCCAGTTTAA 59.339 43.478 5.23 0.00 41.64 1.52
2991 3306 4.107311 AGTGGAATTCTCCCCCAGTTTAAA 59.893 41.667 5.23 0.00 41.64 1.52
2992 3307 4.462834 GTGGAATTCTCCCCCAGTTTAAAG 59.537 45.833 5.23 0.00 41.64 1.85
2993 3308 4.023980 GGAATTCTCCCCCAGTTTAAAGG 58.976 47.826 5.23 0.00 35.42 3.11
2994 3309 4.264217 GGAATTCTCCCCCAGTTTAAAGGA 60.264 45.833 5.23 0.00 35.42 3.36
2995 3310 5.519808 GAATTCTCCCCCAGTTTAAAGGAT 58.480 41.667 0.00 0.00 0.00 3.24
2996 3311 4.586306 TTCTCCCCCAGTTTAAAGGATC 57.414 45.455 0.00 0.00 0.00 3.36
2997 3312 3.815507 TCTCCCCCAGTTTAAAGGATCT 58.184 45.455 0.00 0.00 0.00 2.75
2998 3313 3.780850 TCTCCCCCAGTTTAAAGGATCTC 59.219 47.826 0.00 0.00 0.00 2.75
2999 3314 3.783082 CTCCCCCAGTTTAAAGGATCTCT 59.217 47.826 0.00 0.00 0.00 3.10
3000 3315 3.780850 TCCCCCAGTTTAAAGGATCTCTC 59.219 47.826 0.00 0.00 0.00 3.20
3001 3316 3.783082 CCCCCAGTTTAAAGGATCTCTCT 59.217 47.826 0.00 0.00 0.00 3.10
3002 3317 4.969359 CCCCCAGTTTAAAGGATCTCTCTA 59.031 45.833 0.00 0.00 0.00 2.43
3003 3318 5.163290 CCCCCAGTTTAAAGGATCTCTCTAC 60.163 48.000 0.00 0.00 0.00 2.59
3004 3319 5.452077 CCCCAGTTTAAAGGATCTCTCTACG 60.452 48.000 0.00 0.00 0.00 3.51
3005 3320 5.127356 CCCAGTTTAAAGGATCTCTCTACGT 59.873 44.000 0.00 0.00 0.00 3.57
3006 3321 6.320672 CCCAGTTTAAAGGATCTCTCTACGTA 59.679 42.308 0.00 0.00 0.00 3.57
3007 3322 7.014422 CCCAGTTTAAAGGATCTCTCTACGTAT 59.986 40.741 0.00 0.00 0.00 3.06
3008 3323 9.064706 CCAGTTTAAAGGATCTCTCTACGTATA 57.935 37.037 0.00 0.00 0.00 1.47
3014 3329 7.931578 AAGGATCTCTCTACGTATATTCAGG 57.068 40.000 0.00 0.00 0.00 3.86
3015 3330 5.883673 AGGATCTCTCTACGTATATTCAGGC 59.116 44.000 0.00 0.00 0.00 4.85
3016 3331 5.066764 GGATCTCTCTACGTATATTCAGGCC 59.933 48.000 0.00 0.00 0.00 5.19
3017 3332 4.333690 TCTCTCTACGTATATTCAGGCCC 58.666 47.826 0.00 0.00 0.00 5.80
3018 3333 3.079578 TCTCTACGTATATTCAGGCCCG 58.920 50.000 0.00 0.00 0.00 6.13
3019 3334 2.818432 CTCTACGTATATTCAGGCCCGT 59.182 50.000 0.00 1.11 0.00 5.28
3020 3335 4.005650 CTCTACGTATATTCAGGCCCGTA 58.994 47.826 0.00 2.47 0.00 4.02
3021 3336 4.592942 TCTACGTATATTCAGGCCCGTAT 58.407 43.478 0.00 0.00 31.37 3.06
3022 3337 5.012239 TCTACGTATATTCAGGCCCGTATT 58.988 41.667 0.00 0.00 31.37 1.89
3023 3338 4.612264 ACGTATATTCAGGCCCGTATTT 57.388 40.909 0.00 0.00 0.00 1.40
3024 3339 4.563061 ACGTATATTCAGGCCCGTATTTC 58.437 43.478 0.00 0.00 0.00 2.17
3025 3340 4.039488 ACGTATATTCAGGCCCGTATTTCA 59.961 41.667 0.00 0.00 0.00 2.69
3026 3341 4.625742 CGTATATTCAGGCCCGTATTTCAG 59.374 45.833 0.00 0.00 0.00 3.02
3027 3342 4.974645 ATATTCAGGCCCGTATTTCAGA 57.025 40.909 0.00 0.00 0.00 3.27
3028 3343 2.396590 TTCAGGCCCGTATTTCAGAC 57.603 50.000 0.00 0.00 0.00 3.51
3029 3344 1.271856 TCAGGCCCGTATTTCAGACA 58.728 50.000 0.00 0.00 0.00 3.41
3030 3345 1.066430 TCAGGCCCGTATTTCAGACAC 60.066 52.381 0.00 0.00 0.00 3.67
3031 3346 0.981183 AGGCCCGTATTTCAGACACA 59.019 50.000 0.00 0.00 0.00 3.72
3032 3347 1.559682 AGGCCCGTATTTCAGACACAT 59.440 47.619 0.00 0.00 0.00 3.21
3033 3348 2.026262 AGGCCCGTATTTCAGACACATT 60.026 45.455 0.00 0.00 0.00 2.71
3034 3349 2.354821 GGCCCGTATTTCAGACACATTC 59.645 50.000 0.00 0.00 0.00 2.67
3035 3350 3.270877 GCCCGTATTTCAGACACATTCT 58.729 45.455 0.00 0.00 33.33 2.40
3064 3379 8.846423 TTTTTGGTATATACATGGGGAACATT 57.154 30.769 14.70 0.00 37.84 2.71
3065 3380 8.846423 TTTTGGTATATACATGGGGAACATTT 57.154 30.769 14.70 0.00 37.84 2.32
3066 3381 8.846423 TTTGGTATATACATGGGGAACATTTT 57.154 30.769 14.70 0.00 37.84 1.82
3067 3382 8.846423 TTGGTATATACATGGGGAACATTTTT 57.154 30.769 14.70 0.00 37.84 1.94
3100 3415 8.864069 ACGTTGAACATTTTTCAAATACATGA 57.136 26.923 0.00 0.00 39.76 3.07
3101 3416 9.474920 ACGTTGAACATTTTTCAAATACATGAT 57.525 25.926 0.00 0.00 39.76 2.45
3102 3417 9.730146 CGTTGAACATTTTTCAAATACATGATG 57.270 29.630 0.00 0.00 39.76 3.07
3168 3483 8.973378 ACATGTTAAAACATTTTCCAATACACG 58.027 29.630 5.60 0.00 46.95 4.49
3169 3484 7.396190 TGTTAAAACATTTTCCAATACACGC 57.604 32.000 0.00 0.00 33.17 5.34
3170 3485 7.203910 TGTTAAAACATTTTCCAATACACGCT 58.796 30.769 0.00 0.00 33.17 5.07
3171 3486 7.168302 TGTTAAAACATTTTCCAATACACGCTG 59.832 33.333 0.00 0.00 33.17 5.18
3172 3487 5.446143 AAACATTTTCCAATACACGCTGA 57.554 34.783 0.00 0.00 0.00 4.26
3173 3488 5.446143 AACATTTTCCAATACACGCTGAA 57.554 34.783 0.00 0.00 0.00 3.02
3174 3489 4.794169 ACATTTTCCAATACACGCTGAAC 58.206 39.130 0.00 0.00 0.00 3.18
3175 3490 4.277174 ACATTTTCCAATACACGCTGAACA 59.723 37.500 0.00 0.00 0.00 3.18
3176 3491 5.048083 ACATTTTCCAATACACGCTGAACAT 60.048 36.000 0.00 0.00 0.00 2.71
3177 3492 4.418013 TTTCCAATACACGCTGAACATG 57.582 40.909 0.00 0.00 0.00 3.21
3178 3493 3.052455 TCCAATACACGCTGAACATGT 57.948 42.857 0.00 0.00 0.00 3.21
3179 3494 3.407698 TCCAATACACGCTGAACATGTT 58.592 40.909 11.78 11.78 0.00 2.71
3180 3495 3.818210 TCCAATACACGCTGAACATGTTT 59.182 39.130 13.36 0.00 0.00 2.83
3181 3496 4.277174 TCCAATACACGCTGAACATGTTTT 59.723 37.500 13.36 0.00 0.00 2.43
3182 3497 4.981674 CCAATACACGCTGAACATGTTTTT 59.018 37.500 13.36 0.00 0.00 1.94
3183 3498 5.116983 CCAATACACGCTGAACATGTTTTTC 59.883 40.000 13.36 0.24 0.00 2.29
3184 3499 3.773860 ACACGCTGAACATGTTTTTCA 57.226 38.095 13.36 5.51 0.00 2.69
3185 3500 4.103365 ACACGCTGAACATGTTTTTCAA 57.897 36.364 13.36 0.00 32.61 2.69
3186 3501 4.681744 ACACGCTGAACATGTTTTTCAAT 58.318 34.783 13.36 0.00 32.61 2.57
3187 3502 4.503734 ACACGCTGAACATGTTTTTCAATG 59.496 37.500 13.36 9.79 32.61 2.82
3188 3503 4.050553 ACGCTGAACATGTTTTTCAATGG 58.949 39.130 13.36 1.53 32.61 3.16
3189 3504 3.120923 CGCTGAACATGTTTTTCAATGGC 60.121 43.478 13.36 5.71 32.61 4.40
3190 3505 3.808726 GCTGAACATGTTTTTCAATGGCA 59.191 39.130 13.36 1.69 32.61 4.92
3191 3506 4.453136 GCTGAACATGTTTTTCAATGGCAT 59.547 37.500 13.36 0.00 32.61 4.40
3192 3507 5.615984 GCTGAACATGTTTTTCAATGGCATG 60.616 40.000 13.36 0.00 41.67 4.06
3193 3508 5.608449 TGAACATGTTTTTCAATGGCATGA 58.392 33.333 13.36 0.00 39.21 3.07
3194 3509 6.053650 TGAACATGTTTTTCAATGGCATGAA 58.946 32.000 13.36 4.51 39.21 2.57
3195 3510 6.541278 TGAACATGTTTTTCAATGGCATGAAA 59.459 30.769 13.36 16.07 45.07 2.69
3196 3511 6.303021 ACATGTTTTTCAATGGCATGAAAC 57.697 33.333 18.32 17.07 46.06 2.78
3197 3512 5.821470 ACATGTTTTTCAATGGCATGAAACA 59.179 32.000 22.37 22.37 46.06 2.83
3198 3513 6.487331 ACATGTTTTTCAATGGCATGAAACAT 59.513 30.769 23.83 23.83 46.06 2.71
3199 3514 6.939132 TGTTTTTCAATGGCATGAAACATT 57.061 29.167 19.08 0.60 46.06 2.71
3200 3515 6.957150 TGTTTTTCAATGGCATGAAACATTC 58.043 32.000 19.08 12.73 46.06 2.67
3201 3516 6.766944 TGTTTTTCAATGGCATGAAACATTCT 59.233 30.769 19.08 0.00 46.06 2.40
3202 3517 7.282675 TGTTTTTCAATGGCATGAAACATTCTT 59.717 29.630 19.08 0.00 46.06 2.52
3203 3518 7.804843 TTTTCAATGGCATGAAACATTCTTT 57.195 28.000 18.32 0.00 46.06 2.52
3204 3519 7.804843 TTTCAATGGCATGAAACATTCTTTT 57.195 28.000 16.07 0.00 42.68 2.27
3205 3520 7.804843 TTCAATGGCATGAAACATTCTTTTT 57.195 28.000 0.00 0.00 36.42 1.94
3206 3521 8.899427 TTCAATGGCATGAAACATTCTTTTTA 57.101 26.923 0.00 0.00 36.42 1.52
3207 3522 8.899427 TCAATGGCATGAAACATTCTTTTTAA 57.101 26.923 0.00 0.00 35.26 1.52
3208 3523 8.772705 TCAATGGCATGAAACATTCTTTTTAAC 58.227 29.630 0.00 0.00 35.26 2.01
3209 3524 8.776470 CAATGGCATGAAACATTCTTTTTAACT 58.224 29.630 0.00 0.00 35.26 2.24
3210 3525 9.995003 AATGGCATGAAACATTCTTTTTAACTA 57.005 25.926 0.00 0.00 32.12 2.24
3211 3526 9.643693 ATGGCATGAAACATTCTTTTTAACTAG 57.356 29.630 0.00 0.00 0.00 2.57
3212 3527 8.855110 TGGCATGAAACATTCTTTTTAACTAGA 58.145 29.630 0.00 0.00 0.00 2.43
3213 3528 9.346725 GGCATGAAACATTCTTTTTAACTAGAG 57.653 33.333 0.00 0.00 0.00 2.43
3271 3586 8.961294 TCCTAAAATGCCATGATTATTTTTGG 57.039 30.769 21.59 21.59 42.58 3.28
3272 3587 8.766476 TCCTAAAATGCCATGATTATTTTTGGA 58.234 29.630 23.72 23.72 44.96 3.53
3273 3588 9.393512 CCTAAAATGCCATGATTATTTTTGGAA 57.606 29.630 22.31 8.17 43.22 3.53
3279 3594 9.768662 ATGCCATGATTATTTTTGGAATAGTTC 57.231 29.630 0.00 0.00 0.00 3.01
3280 3595 8.980596 TGCCATGATTATTTTTGGAATAGTTCT 58.019 29.630 0.00 0.00 0.00 3.01
3281 3596 9.252962 GCCATGATTATTTTTGGAATAGTTCTG 57.747 33.333 0.00 0.00 0.00 3.02
3282 3597 9.754382 CCATGATTATTTTTGGAATAGTTCTGG 57.246 33.333 0.00 0.00 0.00 3.86
3283 3598 9.754382 CATGATTATTTTTGGAATAGTTCTGGG 57.246 33.333 0.00 0.00 0.00 4.45
3284 3599 9.713684 ATGATTATTTTTGGAATAGTTCTGGGA 57.286 29.630 0.00 0.00 0.00 4.37
3285 3600 9.540538 TGATTATTTTTGGAATAGTTCTGGGAA 57.459 29.630 0.00 0.00 0.00 3.97
3287 3602 6.857437 ATTTTTGGAATAGTTCTGGGAAGG 57.143 37.500 0.00 0.00 0.00 3.46
3288 3603 5.333566 TTTTGGAATAGTTCTGGGAAGGT 57.666 39.130 0.00 0.00 0.00 3.50
3289 3604 5.333566 TTTGGAATAGTTCTGGGAAGGTT 57.666 39.130 0.00 0.00 0.00 3.50
3290 3605 4.569719 TGGAATAGTTCTGGGAAGGTTC 57.430 45.455 0.00 0.00 0.00 3.62
3291 3606 4.175962 TGGAATAGTTCTGGGAAGGTTCT 58.824 43.478 0.00 0.00 0.00 3.01
3292 3607 5.347124 TGGAATAGTTCTGGGAAGGTTCTA 58.653 41.667 0.00 0.00 0.00 2.10
3293 3608 5.970640 TGGAATAGTTCTGGGAAGGTTCTAT 59.029 40.000 0.00 0.00 0.00 1.98
3294 3609 6.126768 TGGAATAGTTCTGGGAAGGTTCTATG 60.127 42.308 0.00 0.00 0.00 2.23
3295 3610 5.896073 ATAGTTCTGGGAAGGTTCTATGG 57.104 43.478 0.00 0.00 0.00 2.74
3296 3611 3.803340 AGTTCTGGGAAGGTTCTATGGA 58.197 45.455 0.00 0.00 0.00 3.41
3297 3612 3.519913 AGTTCTGGGAAGGTTCTATGGAC 59.480 47.826 0.00 0.00 0.00 4.02
3298 3613 2.478292 TCTGGGAAGGTTCTATGGACC 58.522 52.381 0.00 0.00 0.00 4.46
3299 3614 2.045885 TCTGGGAAGGTTCTATGGACCT 59.954 50.000 0.00 0.00 34.95 3.85
3300 3615 2.171448 CTGGGAAGGTTCTATGGACCTG 59.829 54.545 0.00 0.00 33.55 4.00
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
13 14 7.970061 TGCAGAAGTCATAAAATAACTGAATGC 59.030 33.333 0.00 0.00 32.01 3.56
14 15 9.282247 GTGCAGAAGTCATAAAATAACTGAATG 57.718 33.333 0.00 0.00 0.00 2.67
56 57 7.030768 TGACATTGATGCAATTGACATACTTG 58.969 34.615 10.34 11.47 31.05 3.16
78 79 6.613233 ACGTAGATGGAGAATTATCGATGAC 58.387 40.000 8.54 0.56 0.00 3.06
80 81 7.527457 TGTACGTAGATGGAGAATTATCGATG 58.473 38.462 8.54 0.00 0.00 3.84
87 90 6.594159 CCACTTTTGTACGTAGATGGAGAATT 59.406 38.462 4.48 0.00 0.00 2.17
100 103 8.589335 AGTATATTAGATGCCACTTTTGTACG 57.411 34.615 0.00 0.00 0.00 3.67
116 123 7.861372 CGTCCAGGTGAAGTACAAGTATATTAG 59.139 40.741 0.00 0.00 0.00 1.73
118 125 6.570692 CGTCCAGGTGAAGTACAAGTATATT 58.429 40.000 0.00 0.00 0.00 1.28
140 147 0.179032 TTGTGACCACCATGAAGCGT 60.179 50.000 0.00 0.00 0.00 5.07
181 190 4.553323 ACACAAGCAAAAAGAGATGCATC 58.447 39.130 19.37 19.37 44.95 3.91
203 213 5.201243 CCCATACACTATCTGATATCCCGA 58.799 45.833 0.00 0.00 0.00 5.14
236 247 4.803426 CTGGCTCTCGGCGTCCAC 62.803 72.222 6.85 0.00 42.94 4.02
266 277 1.069703 CATGCCAATTATCAGCGGACG 60.070 52.381 0.00 0.00 0.00 4.79
331 406 6.477688 GGAATCCAGTTGCATCAAAACATATG 59.522 38.462 0.00 0.00 0.00 1.78
334 409 4.529377 AGGAATCCAGTTGCATCAAAACAT 59.471 37.500 0.61 0.00 0.00 2.71
377 455 2.125269 CCCCTACGGGTTTGCTCG 60.125 66.667 0.00 0.00 45.50 5.03
390 468 2.422945 GGAAATATTGTCGCTTCCCCCT 60.423 50.000 0.00 0.00 32.71 4.79
399 477 3.002348 GGCTTCGAAGGGAAATATTGTCG 59.998 47.826 25.77 0.00 33.34 4.35
413 491 2.184322 CGGCTAGCAGGCTTCGAA 59.816 61.111 18.24 0.00 38.85 3.71
417 495 1.544825 TTGTCTCGGCTAGCAGGCTT 61.545 55.000 18.24 0.00 38.85 4.35
431 509 5.067805 GGACCAGTTTCATTTTCTGTTGTCT 59.932 40.000 0.00 0.00 0.00 3.41
450 528 1.665137 GGAGGGAGTAAAAGGGACCA 58.335 55.000 0.00 0.00 0.00 4.02
452 530 1.206610 GACGGAGGGAGTAAAAGGGAC 59.793 57.143 0.00 0.00 0.00 4.46
455 533 0.175073 CGGACGGAGGGAGTAAAAGG 59.825 60.000 0.00 0.00 0.00 3.11
456 534 1.180029 TCGGACGGAGGGAGTAAAAG 58.820 55.000 0.00 0.00 0.00 2.27
457 535 1.631405 TTCGGACGGAGGGAGTAAAA 58.369 50.000 0.00 0.00 0.00 1.52
459 537 1.631405 TTTTCGGACGGAGGGAGTAA 58.369 50.000 0.00 0.00 0.00 2.24
460 538 1.856629 ATTTTCGGACGGAGGGAGTA 58.143 50.000 0.00 0.00 0.00 2.59
461 539 1.479730 GTATTTTCGGACGGAGGGAGT 59.520 52.381 0.00 0.00 0.00 3.85
462 540 1.755380 AGTATTTTCGGACGGAGGGAG 59.245 52.381 0.00 0.00 0.00 4.30
463 541 1.856629 AGTATTTTCGGACGGAGGGA 58.143 50.000 0.00 0.00 0.00 4.20
464 542 2.277084 CAAGTATTTTCGGACGGAGGG 58.723 52.381 0.00 0.00 0.00 4.30
465 543 2.928116 GACAAGTATTTTCGGACGGAGG 59.072 50.000 0.00 0.00 0.00 4.30
466 544 2.597305 CGACAAGTATTTTCGGACGGAG 59.403 50.000 0.00 0.00 0.00 4.63
467 545 2.598589 CGACAAGTATTTTCGGACGGA 58.401 47.619 0.00 0.00 0.00 4.69
473 551 4.034048 CCATTCCTCCGACAAGTATTTTCG 59.966 45.833 0.00 0.00 0.00 3.46
474 552 5.183228 TCCATTCCTCCGACAAGTATTTTC 58.817 41.667 0.00 0.00 0.00 2.29
475 553 5.174037 TCCATTCCTCCGACAAGTATTTT 57.826 39.130 0.00 0.00 0.00 1.82
476 554 4.837093 TCCATTCCTCCGACAAGTATTT 57.163 40.909 0.00 0.00 0.00 1.40
477 555 4.164221 ACATCCATTCCTCCGACAAGTATT 59.836 41.667 0.00 0.00 0.00 1.89
478 556 3.711704 ACATCCATTCCTCCGACAAGTAT 59.288 43.478 0.00 0.00 0.00 2.12
479 557 3.104512 ACATCCATTCCTCCGACAAGTA 58.895 45.455 0.00 0.00 0.00 2.24
480 558 1.909302 ACATCCATTCCTCCGACAAGT 59.091 47.619 0.00 0.00 0.00 3.16
481 559 2.698855 ACATCCATTCCTCCGACAAG 57.301 50.000 0.00 0.00 0.00 3.16
482 560 4.771114 AATACATCCATTCCTCCGACAA 57.229 40.909 0.00 0.00 0.00 3.18
483 561 4.444306 GGAAATACATCCATTCCTCCGACA 60.444 45.833 0.00 0.00 39.60 4.35
484 562 4.065789 GGAAATACATCCATTCCTCCGAC 58.934 47.826 0.00 0.00 39.60 4.79
485 563 3.244078 CGGAAATACATCCATTCCTCCGA 60.244 47.826 0.99 0.00 39.22 4.55
486 564 3.067106 CGGAAATACATCCATTCCTCCG 58.933 50.000 0.00 0.00 40.37 4.63
487 565 3.072476 TCCGGAAATACATCCATTCCTCC 59.928 47.826 0.00 0.00 40.37 4.30
488 566 4.065789 GTCCGGAAATACATCCATTCCTC 58.934 47.826 5.23 0.00 40.37 3.71
489 567 3.494398 CGTCCGGAAATACATCCATTCCT 60.494 47.826 5.23 0.00 40.37 3.36
490 568 2.806244 CGTCCGGAAATACATCCATTCC 59.194 50.000 5.23 0.00 39.61 3.01
491 569 2.806244 CCGTCCGGAAATACATCCATTC 59.194 50.000 5.23 0.00 39.61 2.67
492 570 2.436542 TCCGTCCGGAAATACATCCATT 59.563 45.455 5.23 0.00 42.05 3.16
493 571 2.037251 CTCCGTCCGGAAATACATCCAT 59.963 50.000 5.23 0.00 44.66 3.41
494 572 1.411246 CTCCGTCCGGAAATACATCCA 59.589 52.381 5.23 0.00 44.66 3.41
495 573 1.270147 CCTCCGTCCGGAAATACATCC 60.270 57.143 5.23 0.00 44.66 3.51
496 574 1.270147 CCCTCCGTCCGGAAATACATC 60.270 57.143 5.23 0.00 44.66 3.06
497 575 0.756903 CCCTCCGTCCGGAAATACAT 59.243 55.000 5.23 0.00 44.66 2.29
498 576 0.324552 TCCCTCCGTCCGGAAATACA 60.325 55.000 5.23 0.00 44.66 2.29
499 577 0.388294 CTCCCTCCGTCCGGAAATAC 59.612 60.000 5.23 0.00 44.66 1.89
500 578 0.032813 ACTCCCTCCGTCCGGAAATA 60.033 55.000 5.23 0.00 44.66 1.40
501 579 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.000 5.23 0.00 44.66 2.17
502 580 0.682209 CTACTCCCTCCGTCCGGAAA 60.682 60.000 5.23 0.00 44.66 3.13
503 581 1.077212 CTACTCCCTCCGTCCGGAA 60.077 63.158 5.23 0.00 44.66 4.30
504 582 1.351080 ATCTACTCCCTCCGTCCGGA 61.351 60.000 0.00 0.00 42.90 5.14
505 583 0.399454 TATCTACTCCCTCCGTCCGG 59.601 60.000 0.00 0.00 0.00 5.14
506 584 1.878734 GTTATCTACTCCCTCCGTCCG 59.121 57.143 0.00 0.00 0.00 4.79
507 585 2.885894 CTGTTATCTACTCCCTCCGTCC 59.114 54.545 0.00 0.00 0.00 4.79
508 586 3.816523 CTCTGTTATCTACTCCCTCCGTC 59.183 52.174 0.00 0.00 0.00 4.79
509 587 3.202595 ACTCTGTTATCTACTCCCTCCGT 59.797 47.826 0.00 0.00 0.00 4.69
510 588 3.816523 GACTCTGTTATCTACTCCCTCCG 59.183 52.174 0.00 0.00 0.00 4.63
511 589 4.794334 TGACTCTGTTATCTACTCCCTCC 58.206 47.826 0.00 0.00 0.00 4.30
512 590 6.183360 CCTTTGACTCTGTTATCTACTCCCTC 60.183 46.154 0.00 0.00 0.00 4.30
513 591 5.659079 CCTTTGACTCTGTTATCTACTCCCT 59.341 44.000 0.00 0.00 0.00 4.20
514 592 5.422650 ACCTTTGACTCTGTTATCTACTCCC 59.577 44.000 0.00 0.00 0.00 4.30
515 593 6.378848 AGACCTTTGACTCTGTTATCTACTCC 59.621 42.308 0.00 0.00 0.00 3.85
516 594 7.399245 AGACCTTTGACTCTGTTATCTACTC 57.601 40.000 0.00 0.00 0.00 2.59
517 595 7.784470 AAGACCTTTGACTCTGTTATCTACT 57.216 36.000 0.00 0.00 0.00 2.57
518 596 9.356433 GTAAAGACCTTTGACTCTGTTATCTAC 57.644 37.037 5.34 0.00 34.23 2.59
526 604 6.986817 TCAAGAAGTAAAGACCTTTGACTCTG 59.013 38.462 5.34 4.87 34.23 3.35
533 611 7.993183 TGAAGATGTCAAGAAGTAAAGACCTTT 59.007 33.333 0.41 0.41 33.17 3.11
534 612 7.509546 TGAAGATGTCAAGAAGTAAAGACCTT 58.490 34.615 0.00 0.00 31.51 3.50
571 649 6.878923 AGTAATGTTGTTGCTGCTTATGAGTA 59.121 34.615 0.00 0.00 0.00 2.59
593 671 3.628008 TCTGGAAGGCTCATTACGAGTA 58.372 45.455 0.00 0.00 44.33 2.59
595 673 3.742433 ATCTGGAAGGCTCATTACGAG 57.258 47.619 0.00 0.00 45.37 4.18
601 679 4.340381 GCAATTTGTATCTGGAAGGCTCAT 59.660 41.667 0.00 0.00 0.00 2.90
657 803 9.941325 AAATGCATGATAACCAGTTGAAAAATA 57.059 25.926 0.00 0.00 0.00 1.40
706 854 4.749245 AAGTCCATTTTAGTTCGTGCAG 57.251 40.909 0.00 0.00 0.00 4.41
728 876 9.877222 CCCTAAAAAGTCCATATTACCCTTAAT 57.123 33.333 0.00 0.00 0.00 1.40
731 879 6.221029 ACCCCTAAAAAGTCCATATTACCCTT 59.779 38.462 0.00 0.00 0.00 3.95
794 1051 8.196802 ACAAATTTTTAGTTTCTTCTTGGTGC 57.803 30.769 0.00 0.00 0.00 5.01
810 1067 8.628630 TTTTTGGGAGTGAGAAACAAATTTTT 57.371 26.923 0.00 0.00 31.92 1.94
817 1074 2.693074 GCCTTTTTGGGAGTGAGAAACA 59.307 45.455 0.00 0.00 36.00 2.83
828 1085 1.152139 TGGGAAGGGCCTTTTTGGG 60.152 57.895 21.92 0.00 36.66 4.12
841 1098 0.482446 ATCTGTTGTTGGGCTGGGAA 59.518 50.000 0.00 0.00 0.00 3.97
844 1101 0.883833 GTCATCTGTTGTTGGGCTGG 59.116 55.000 0.00 0.00 0.00 4.85
859 1116 0.459899 TTGAGCGCCTATGTCGTCAT 59.540 50.000 2.29 0.00 38.00 3.06
861 1118 1.146358 GGTTGAGCGCCTATGTCGTC 61.146 60.000 2.29 0.00 0.00 4.20
862 1119 1.153628 GGTTGAGCGCCTATGTCGT 60.154 57.895 2.29 0.00 0.00 4.34
863 1120 1.883084 GGGTTGAGCGCCTATGTCG 60.883 63.158 2.29 0.00 0.00 4.35
875 1132 4.700448 TAGGACGGGCCGGGTTGA 62.700 66.667 31.78 8.37 43.43 3.18
891 1148 3.572255 AGAAGACAAATTTTGCGGGCTTA 59.428 39.130 9.04 0.00 0.00 3.09
1288 1564 2.447630 TCTGGAAGAAGCGGGTGAA 58.552 52.632 0.00 0.00 42.31 3.18
1334 1610 0.622665 AGGCAATGGAGGGAACAGAG 59.377 55.000 0.00 0.00 0.00 3.35
1335 1611 0.329261 CAGGCAATGGAGGGAACAGA 59.671 55.000 0.00 0.00 0.00 3.41
1336 1612 0.329261 TCAGGCAATGGAGGGAACAG 59.671 55.000 0.00 0.00 0.00 3.16
1337 1613 0.776810 TTCAGGCAATGGAGGGAACA 59.223 50.000 0.00 0.00 0.00 3.18
1338 1614 1.177401 GTTCAGGCAATGGAGGGAAC 58.823 55.000 0.00 0.00 0.00 3.62
1345 1621 3.094572 AGAATTCAGGTTCAGGCAATGG 58.905 45.455 8.44 0.00 0.00 3.16
1380 1656 0.796312 CCCATTTCACGTCTGGTTCG 59.204 55.000 0.00 0.00 0.00 3.95
1383 1663 3.370527 CCTTATCCCATTTCACGTCTGGT 60.371 47.826 0.00 0.00 0.00 4.00
1389 1669 0.944386 CCGCCTTATCCCATTTCACG 59.056 55.000 0.00 0.00 0.00 4.35
1393 1673 0.106918 TTCGCCGCCTTATCCCATTT 60.107 50.000 0.00 0.00 0.00 2.32
1425 1707 4.228097 CTGCAGATTTCCGCGCGG 62.228 66.667 42.13 42.13 0.00 6.46
1427 1709 3.100862 GACCTGCAGATTTCCGCGC 62.101 63.158 17.39 0.00 0.00 6.86
1428 1710 2.802667 CGACCTGCAGATTTCCGCG 61.803 63.158 17.39 0.00 0.00 6.46
1430 1712 2.802667 CGCGACCTGCAGATTTCCG 61.803 63.158 17.39 11.52 46.97 4.30
1431 1713 1.696832 GACGCGACCTGCAGATTTCC 61.697 60.000 17.39 0.00 46.97 3.13
1432 1714 1.710339 GACGCGACCTGCAGATTTC 59.290 57.895 17.39 7.57 46.97 2.17
1433 1715 2.094659 CGACGCGACCTGCAGATTT 61.095 57.895 17.39 0.00 46.97 2.17
1500 1782 4.429212 CGGCACCATGGACGACGA 62.429 66.667 24.17 0.00 0.00 4.20
2292 2580 6.419116 CGATGATGATAAGTGGTTCAGTACAG 59.581 42.308 0.00 0.00 0.00 2.74
2307 2595 3.165875 GAAGGGGAGGACGATGATGATA 58.834 50.000 0.00 0.00 0.00 2.15
2317 2611 4.475135 GCAGGCGAAGGGGAGGAC 62.475 72.222 0.00 0.00 0.00 3.85
2320 2614 2.747855 GTTGCAGGCGAAGGGGAG 60.748 66.667 0.00 0.00 0.00 4.30
2327 2621 0.179150 GTTGTTGTTGTTGCAGGCGA 60.179 50.000 0.00 0.00 0.00 5.54
2347 2641 1.602877 GCAATGTCGTCGTCGTCGTT 61.603 55.000 11.41 1.50 35.51 3.85
2348 2642 2.078914 GCAATGTCGTCGTCGTCGT 61.079 57.895 11.41 0.00 38.33 4.34
2349 2643 2.681666 GCAATGTCGTCGTCGTCG 59.318 61.111 5.50 5.50 38.33 5.12
2350 2644 1.007336 AAGGCAATGTCGTCGTCGTC 61.007 55.000 1.33 0.00 38.33 4.20
2351 2645 1.006571 AAGGCAATGTCGTCGTCGT 60.007 52.632 1.33 0.00 38.33 4.34
2352 2646 1.416049 CAAGGCAATGTCGTCGTCG 59.584 57.895 0.00 0.00 38.55 5.12
2523 2818 2.141535 TAACAACAATGGCGGCAAAC 57.858 45.000 18.31 0.00 0.00 2.93
2635 2930 2.086869 GAGAATTAACCAGCAGCAGCA 58.913 47.619 3.17 0.00 45.49 4.41
2636 2931 1.063174 CGAGAATTAACCAGCAGCAGC 59.937 52.381 0.00 0.00 42.56 5.25
2637 2932 2.350522 ACGAGAATTAACCAGCAGCAG 58.649 47.619 0.00 0.00 0.00 4.24
2638 2933 2.472695 ACGAGAATTAACCAGCAGCA 57.527 45.000 0.00 0.00 0.00 4.41
2639 2934 3.831715 AAACGAGAATTAACCAGCAGC 57.168 42.857 0.00 0.00 0.00 5.25
2640 2935 5.519722 ACAAAAACGAGAATTAACCAGCAG 58.480 37.500 0.00 0.00 0.00 4.24
2653 2951 0.179292 CGTCGCGGTACAAAAACGAG 60.179 55.000 6.13 0.00 32.76 4.18
2668 2966 1.630148 GTCCATGAAGAACCTCGTCG 58.370 55.000 0.00 0.00 0.00 5.12
2678 2976 2.749621 GTGCTAAGGTTGGTCCATGAAG 59.250 50.000 0.00 0.00 39.02 3.02
2713 3011 7.554959 TTTGAAGAACACTATAGAAGGGTCT 57.445 36.000 6.78 6.19 42.72 3.85
2714 3012 8.794335 AATTTGAAGAACACTATAGAAGGGTC 57.206 34.615 6.78 3.91 42.72 4.46
2716 3014 9.231297 TGAAATTTGAAGAACACTATAGAAGGG 57.769 33.333 6.78 0.00 33.39 3.95
2721 3019 9.442047 ACCTCTGAAATTTGAAGAACACTATAG 57.558 33.333 0.00 0.00 0.00 1.31
2722 3020 9.793259 AACCTCTGAAATTTGAAGAACACTATA 57.207 29.630 0.00 0.00 0.00 1.31
2723 3021 8.697507 AACCTCTGAAATTTGAAGAACACTAT 57.302 30.769 0.00 0.00 0.00 2.12
2724 3022 8.405531 CAAACCTCTGAAATTTGAAGAACACTA 58.594 33.333 0.00 0.00 35.73 2.74
2725 3023 7.093771 ACAAACCTCTGAAATTTGAAGAACACT 60.094 33.333 16.10 0.00 36.91 3.55
2726 3024 7.009540 CACAAACCTCTGAAATTTGAAGAACAC 59.990 37.037 16.10 0.00 36.91 3.32
2727 3025 7.035004 CACAAACCTCTGAAATTTGAAGAACA 58.965 34.615 16.10 0.00 36.91 3.18
2728 3026 6.476706 CCACAAACCTCTGAAATTTGAAGAAC 59.523 38.462 16.10 0.00 36.91 3.01
2729 3027 6.154363 ACCACAAACCTCTGAAATTTGAAGAA 59.846 34.615 16.10 0.00 36.91 2.52
2730 3028 5.656416 ACCACAAACCTCTGAAATTTGAAGA 59.344 36.000 16.10 0.00 36.91 2.87
2774 3085 7.602753 TCGTATCAGAGACAAGAGAAATGAAA 58.397 34.615 0.00 0.00 0.00 2.69
2802 3113 0.112412 TCCACCAAGCCTTTCTTCCC 59.888 55.000 0.00 0.00 31.27 3.97
2805 3116 2.452600 TGTTCCACCAAGCCTTTCTT 57.547 45.000 0.00 0.00 34.78 2.52
2857 3172 1.302033 CAACCAGTTGAGCTCGGCT 60.302 57.895 9.64 6.63 42.93 5.52
2858 3173 2.328099 CCAACCAGTTGAGCTCGGC 61.328 63.158 12.06 4.14 42.93 5.54
2859 3174 1.672356 CCCAACCAGTTGAGCTCGG 60.672 63.158 12.06 6.53 42.93 4.63
2860 3175 1.672356 CCCCAACCAGTTGAGCTCG 60.672 63.158 12.06 0.00 42.93 5.03
2861 3176 1.303643 CCCCCAACCAGTTGAGCTC 60.304 63.158 12.06 6.82 42.93 4.09
2862 3177 2.846532 CCCCCAACCAGTTGAGCT 59.153 61.111 12.06 0.00 42.93 4.09
2876 3191 3.714798 TGGATTTGTACATCTACTCCCCC 59.285 47.826 0.00 0.00 0.00 5.40
2877 3192 5.367945 TTGGATTTGTACATCTACTCCCC 57.632 43.478 0.00 0.00 0.00 4.81
2878 3193 6.935208 GGTATTGGATTTGTACATCTACTCCC 59.065 42.308 0.00 0.00 0.00 4.30
2879 3194 7.657761 CAGGTATTGGATTTGTACATCTACTCC 59.342 40.741 0.00 0.00 0.00 3.85
2880 3195 8.594881 CAGGTATTGGATTTGTACATCTACTC 57.405 38.462 0.00 0.00 0.00 2.59
2897 3212 4.599041 TGAGGATTTGAACCCAGGTATTG 58.401 43.478 0.00 0.00 0.00 1.90
2898 3213 4.946160 TGAGGATTTGAACCCAGGTATT 57.054 40.909 0.00 0.00 0.00 1.89
2899 3214 4.386761 CCATGAGGATTTGAACCCAGGTAT 60.387 45.833 0.00 0.00 36.89 2.73
2900 3215 3.053693 CCATGAGGATTTGAACCCAGGTA 60.054 47.826 0.00 0.00 36.89 3.08
2901 3216 2.291800 CCATGAGGATTTGAACCCAGGT 60.292 50.000 0.00 0.00 36.89 4.00
2902 3217 2.025037 TCCATGAGGATTTGAACCCAGG 60.025 50.000 0.00 0.00 39.61 4.45
2903 3218 3.054139 TCTCCATGAGGATTTGAACCCAG 60.054 47.826 0.00 0.00 44.70 4.45
2904 3219 2.918934 TCTCCATGAGGATTTGAACCCA 59.081 45.455 0.00 0.00 44.70 4.51
2905 3220 3.282885 GTCTCCATGAGGATTTGAACCC 58.717 50.000 0.00 0.00 44.70 4.11
2906 3221 2.939103 CGTCTCCATGAGGATTTGAACC 59.061 50.000 0.00 0.00 44.70 3.62
2907 3222 3.861840 TCGTCTCCATGAGGATTTGAAC 58.138 45.455 0.00 0.00 44.70 3.18
2908 3223 4.551702 TTCGTCTCCATGAGGATTTGAA 57.448 40.909 0.00 0.00 44.70 2.69
2909 3224 4.760530 ATTCGTCTCCATGAGGATTTGA 57.239 40.909 0.00 0.00 44.70 2.69
2910 3225 5.824904 AAATTCGTCTCCATGAGGATTTG 57.175 39.130 0.00 0.00 44.70 2.32
2911 3226 6.889198 TCTAAATTCGTCTCCATGAGGATTT 58.111 36.000 0.00 0.00 44.70 2.17
2912 3227 6.485830 TCTAAATTCGTCTCCATGAGGATT 57.514 37.500 0.00 0.00 44.70 3.01
2913 3228 6.678568 ATCTAAATTCGTCTCCATGAGGAT 57.321 37.500 0.00 0.00 44.70 3.24
2914 3229 6.463049 GGAATCTAAATTCGTCTCCATGAGGA 60.463 42.308 0.00 0.00 41.94 3.71
2915 3230 5.698545 GGAATCTAAATTCGTCTCCATGAGG 59.301 44.000 0.00 0.00 41.94 3.86
2916 3231 6.520272 AGGAATCTAAATTCGTCTCCATGAG 58.480 40.000 0.00 0.00 41.94 2.90
2917 3232 6.485830 AGGAATCTAAATTCGTCTCCATGA 57.514 37.500 0.00 0.00 41.94 3.07
2918 3233 8.839310 AATAGGAATCTAAATTCGTCTCCATG 57.161 34.615 0.00 0.00 41.94 3.66
2932 3247 9.447279 TGGTCCTCAAGAATAAATAGGAATCTA 57.553 33.333 0.00 0.00 38.06 1.98
2933 3248 8.337118 TGGTCCTCAAGAATAAATAGGAATCT 57.663 34.615 0.00 0.00 38.06 2.40
2934 3249 8.432805 TCTGGTCCTCAAGAATAAATAGGAATC 58.567 37.037 0.00 0.00 38.06 2.52
2935 3250 8.214364 GTCTGGTCCTCAAGAATAAATAGGAAT 58.786 37.037 0.00 0.00 38.06 3.01
2936 3251 7.403231 AGTCTGGTCCTCAAGAATAAATAGGAA 59.597 37.037 0.00 0.00 38.06 3.36
2937 3252 6.903534 AGTCTGGTCCTCAAGAATAAATAGGA 59.096 38.462 0.00 0.00 33.97 2.94
2938 3253 6.989169 CAGTCTGGTCCTCAAGAATAAATAGG 59.011 42.308 0.00 0.00 0.00 2.57
2939 3254 6.989169 CCAGTCTGGTCCTCAAGAATAAATAG 59.011 42.308 11.09 0.00 31.35 1.73
2940 3255 6.126768 CCCAGTCTGGTCCTCAAGAATAAATA 60.127 42.308 17.85 0.00 35.17 1.40
2941 3256 5.339530 CCCAGTCTGGTCCTCAAGAATAAAT 60.340 44.000 17.85 0.00 35.17 1.40
2942 3257 4.019321 CCCAGTCTGGTCCTCAAGAATAAA 60.019 45.833 17.85 0.00 35.17 1.40
2943 3258 3.519510 CCCAGTCTGGTCCTCAAGAATAA 59.480 47.826 17.85 0.00 35.17 1.40
2944 3259 3.107601 CCCAGTCTGGTCCTCAAGAATA 58.892 50.000 17.85 0.00 35.17 1.75
2945 3260 1.912043 CCCAGTCTGGTCCTCAAGAAT 59.088 52.381 17.85 0.00 35.17 2.40
2946 3261 1.132849 TCCCAGTCTGGTCCTCAAGAA 60.133 52.381 17.85 0.00 35.17 2.52
2947 3262 0.487325 TCCCAGTCTGGTCCTCAAGA 59.513 55.000 17.85 3.02 35.17 3.02
2948 3263 1.352083 TTCCCAGTCTGGTCCTCAAG 58.648 55.000 17.85 0.52 35.17 3.02
2949 3264 1.699634 CTTTCCCAGTCTGGTCCTCAA 59.300 52.381 17.85 2.36 35.17 3.02
2950 3265 1.352083 CTTTCCCAGTCTGGTCCTCA 58.648 55.000 17.85 0.00 35.17 3.86
2951 3266 1.002544 CACTTTCCCAGTCTGGTCCTC 59.997 57.143 17.85 0.00 35.17 3.71
2952 3267 1.059913 CACTTTCCCAGTCTGGTCCT 58.940 55.000 17.85 0.00 35.17 3.85
2953 3268 0.036875 CCACTTTCCCAGTCTGGTCC 59.963 60.000 17.85 0.00 35.17 4.46
2954 3269 1.056660 TCCACTTTCCCAGTCTGGTC 58.943 55.000 17.85 0.00 35.17 4.02
2955 3270 1.518367 TTCCACTTTCCCAGTCTGGT 58.482 50.000 17.85 0.00 35.17 4.00
2956 3271 2.887151 ATTCCACTTTCCCAGTCTGG 57.113 50.000 12.40 12.40 37.25 3.86
2957 3272 4.006319 GAGAATTCCACTTTCCCAGTCTG 58.994 47.826 0.65 0.00 30.92 3.51
2958 3273 3.009584 GGAGAATTCCACTTTCCCAGTCT 59.990 47.826 0.65 0.00 43.45 3.24
2959 3274 3.348119 GGAGAATTCCACTTTCCCAGTC 58.652 50.000 0.65 0.00 43.45 3.51
2960 3275 2.041755 GGGAGAATTCCACTTTCCCAGT 59.958 50.000 19.88 0.00 45.98 4.00
2961 3276 2.728007 GGGAGAATTCCACTTTCCCAG 58.272 52.381 19.88 0.00 45.98 4.45
2962 3277 2.899303 GGGAGAATTCCACTTTCCCA 57.101 50.000 19.88 0.00 45.98 4.37
2963 3278 1.342076 GGGGGAGAATTCCACTTTCCC 60.342 57.143 17.59 17.59 46.84 3.97
2964 3279 1.357761 TGGGGGAGAATTCCACTTTCC 59.642 52.381 0.65 1.87 38.87 3.13
2965 3280 2.041755 ACTGGGGGAGAATTCCACTTTC 59.958 50.000 0.65 0.00 38.87 2.62
2966 3281 2.073776 ACTGGGGGAGAATTCCACTTT 58.926 47.619 0.65 0.00 38.87 2.66
2967 3282 1.760405 ACTGGGGGAGAATTCCACTT 58.240 50.000 0.65 0.00 38.87 3.16
2968 3283 1.760405 AACTGGGGGAGAATTCCACT 58.240 50.000 0.65 0.00 38.87 4.00
2969 3284 2.604912 AAACTGGGGGAGAATTCCAC 57.395 50.000 0.65 0.00 46.96 4.02
2970 3285 4.510205 CCTTTAAACTGGGGGAGAATTCCA 60.510 45.833 0.65 0.00 45.98 3.53
2971 3286 4.023980 CCTTTAAACTGGGGGAGAATTCC 58.976 47.826 0.65 0.00 43.23 3.01
2972 3287 4.930696 TCCTTTAAACTGGGGGAGAATTC 58.069 43.478 0.00 0.00 0.00 2.17
2973 3288 5.256389 AGATCCTTTAAACTGGGGGAGAATT 59.744 40.000 0.00 0.00 0.00 2.17
2974 3289 4.796265 AGATCCTTTAAACTGGGGGAGAAT 59.204 41.667 0.00 0.00 0.00 2.40
2975 3290 4.183916 AGATCCTTTAAACTGGGGGAGAA 58.816 43.478 0.00 0.00 0.00 2.87
2976 3291 3.780850 GAGATCCTTTAAACTGGGGGAGA 59.219 47.826 0.00 0.00 0.00 3.71
2977 3292 3.783082 AGAGATCCTTTAAACTGGGGGAG 59.217 47.826 0.00 0.00 0.00 4.30
2978 3293 3.780850 GAGAGATCCTTTAAACTGGGGGA 59.219 47.826 0.00 0.00 0.00 4.81
2979 3294 3.783082 AGAGAGATCCTTTAAACTGGGGG 59.217 47.826 0.00 0.00 0.00 5.40
2980 3295 5.452077 CGTAGAGAGATCCTTTAAACTGGGG 60.452 48.000 0.00 0.00 0.00 4.96
2981 3296 5.127356 ACGTAGAGAGATCCTTTAAACTGGG 59.873 44.000 0.00 0.00 0.00 4.45
2982 3297 6.210287 ACGTAGAGAGATCCTTTAAACTGG 57.790 41.667 0.00 0.00 0.00 4.00
2988 3303 9.451002 CCTGAATATACGTAGAGAGATCCTTTA 57.549 37.037 0.08 0.00 0.00 1.85
2989 3304 7.094118 GCCTGAATATACGTAGAGAGATCCTTT 60.094 40.741 0.08 0.00 0.00 3.11
2990 3305 6.376018 GCCTGAATATACGTAGAGAGATCCTT 59.624 42.308 0.08 0.00 0.00 3.36
2991 3306 5.883673 GCCTGAATATACGTAGAGAGATCCT 59.116 44.000 0.08 0.00 0.00 3.24
2992 3307 5.066764 GGCCTGAATATACGTAGAGAGATCC 59.933 48.000 0.08 0.00 0.00 3.36
2993 3308 5.066764 GGGCCTGAATATACGTAGAGAGATC 59.933 48.000 0.84 0.00 0.00 2.75
2994 3309 4.951094 GGGCCTGAATATACGTAGAGAGAT 59.049 45.833 0.84 0.00 0.00 2.75
2995 3310 4.333690 GGGCCTGAATATACGTAGAGAGA 58.666 47.826 0.84 0.00 0.00 3.10
2996 3311 3.127203 CGGGCCTGAATATACGTAGAGAG 59.873 52.174 5.28 0.00 0.00 3.20
2997 3312 3.079578 CGGGCCTGAATATACGTAGAGA 58.920 50.000 5.28 0.00 0.00 3.10
2998 3313 2.818432 ACGGGCCTGAATATACGTAGAG 59.182 50.000 21.41 0.00 32.30 2.43
2999 3314 2.867624 ACGGGCCTGAATATACGTAGA 58.132 47.619 21.41 0.00 32.30 2.59
3000 3315 4.978083 ATACGGGCCTGAATATACGTAG 57.022 45.455 21.41 0.00 39.67 3.51
3001 3316 5.243507 TGAAATACGGGCCTGAATATACGTA 59.756 40.000 21.41 13.83 40.43 3.57
3002 3317 4.039488 TGAAATACGGGCCTGAATATACGT 59.961 41.667 21.41 11.82 38.23 3.57
3003 3318 4.562082 TGAAATACGGGCCTGAATATACG 58.438 43.478 21.41 5.24 0.00 3.06
3004 3319 5.638234 GTCTGAAATACGGGCCTGAATATAC 59.362 44.000 21.41 5.57 0.00 1.47
3005 3320 5.305902 TGTCTGAAATACGGGCCTGAATATA 59.694 40.000 21.41 0.00 0.00 0.86
3006 3321 4.102524 TGTCTGAAATACGGGCCTGAATAT 59.897 41.667 21.41 3.36 0.00 1.28
3007 3322 3.452990 TGTCTGAAATACGGGCCTGAATA 59.547 43.478 21.41 0.41 0.00 1.75
3008 3323 2.238646 TGTCTGAAATACGGGCCTGAAT 59.761 45.455 21.41 0.00 0.00 2.57
3009 3324 1.626321 TGTCTGAAATACGGGCCTGAA 59.374 47.619 21.41 0.00 0.00 3.02
3010 3325 1.066430 GTGTCTGAAATACGGGCCTGA 60.066 52.381 21.41 1.76 0.00 3.86
3011 3326 1.338674 TGTGTCTGAAATACGGGCCTG 60.339 52.381 11.02 11.02 0.00 4.85
3012 3327 0.981183 TGTGTCTGAAATACGGGCCT 59.019 50.000 0.84 0.00 0.00 5.19
3013 3328 2.038387 ATGTGTCTGAAATACGGGCC 57.962 50.000 0.00 0.00 0.00 5.80
3014 3329 3.270877 AGAATGTGTCTGAAATACGGGC 58.729 45.455 0.00 0.00 34.29 6.13
3039 3354 8.846423 AATGTTCCCCATGTATATACCAAAAA 57.154 30.769 10.38 0.00 32.82 1.94
3040 3355 8.846423 AAATGTTCCCCATGTATATACCAAAA 57.154 30.769 10.38 0.00 32.82 2.44
3041 3356 8.846423 AAAATGTTCCCCATGTATATACCAAA 57.154 30.769 10.38 0.00 32.82 3.28
3042 3357 8.846423 AAAAATGTTCCCCATGTATATACCAA 57.154 30.769 10.38 0.00 32.82 3.67
3074 3389 9.952188 TCATGTATTTGAAAAATGTTCAACGTA 57.048 25.926 0.00 0.00 38.05 3.57
3075 3390 8.864069 TCATGTATTTGAAAAATGTTCAACGT 57.136 26.923 0.00 0.00 38.05 3.99
3076 3391 9.730146 CATCATGTATTTGAAAAATGTTCAACG 57.270 29.630 0.00 0.00 38.05 4.10
3145 3460 7.168302 CAGCGTGTATTGGAAAATGTTTTAACA 59.832 33.333 0.00 0.00 44.06 2.41
3146 3461 7.380065 TCAGCGTGTATTGGAAAATGTTTTAAC 59.620 33.333 0.00 0.00 0.00 2.01
3147 3462 7.426410 TCAGCGTGTATTGGAAAATGTTTTAA 58.574 30.769 0.00 0.00 0.00 1.52
3148 3463 6.971602 TCAGCGTGTATTGGAAAATGTTTTA 58.028 32.000 0.00 0.00 0.00 1.52
3149 3464 5.837437 TCAGCGTGTATTGGAAAATGTTTT 58.163 33.333 0.00 0.00 0.00 2.43
3150 3465 5.446143 TCAGCGTGTATTGGAAAATGTTT 57.554 34.783 0.00 0.00 0.00 2.83
3151 3466 5.219633 GTTCAGCGTGTATTGGAAAATGTT 58.780 37.500 0.00 0.00 0.00 2.71
3152 3467 4.277174 TGTTCAGCGTGTATTGGAAAATGT 59.723 37.500 0.00 0.00 0.00 2.71
3153 3468 4.793071 TGTTCAGCGTGTATTGGAAAATG 58.207 39.130 0.00 0.00 0.00 2.32
3154 3469 5.048083 ACATGTTCAGCGTGTATTGGAAAAT 60.048 36.000 0.00 0.00 44.85 1.82
3155 3470 4.277174 ACATGTTCAGCGTGTATTGGAAAA 59.723 37.500 0.00 0.00 44.85 2.29
3156 3471 3.818210 ACATGTTCAGCGTGTATTGGAAA 59.182 39.130 0.00 0.00 44.85 3.13
3157 3472 3.407698 ACATGTTCAGCGTGTATTGGAA 58.592 40.909 0.00 0.00 44.85 3.53
3158 3473 3.052455 ACATGTTCAGCGTGTATTGGA 57.948 42.857 0.00 0.00 44.85 3.53
3159 3474 3.829886 AACATGTTCAGCGTGTATTGG 57.170 42.857 4.92 0.00 45.86 3.16
3160 3475 5.685068 TGAAAAACATGTTCAGCGTGTATTG 59.315 36.000 12.39 0.00 45.86 1.90
3161 3476 5.826586 TGAAAAACATGTTCAGCGTGTATT 58.173 33.333 12.39 0.00 45.86 1.89
3162 3477 5.431420 TGAAAAACATGTTCAGCGTGTAT 57.569 34.783 12.39 0.00 45.86 2.29
3163 3478 4.884458 TGAAAAACATGTTCAGCGTGTA 57.116 36.364 12.39 0.00 45.86 2.90
3165 3480 4.084952 CCATTGAAAAACATGTTCAGCGTG 60.085 41.667 12.39 7.12 36.41 5.34
3166 3481 4.050553 CCATTGAAAAACATGTTCAGCGT 58.949 39.130 12.39 0.00 36.41 5.07
3167 3482 3.120923 GCCATTGAAAAACATGTTCAGCG 60.121 43.478 12.39 1.24 36.41 5.18
3168 3483 3.808726 TGCCATTGAAAAACATGTTCAGC 59.191 39.130 12.39 6.66 36.41 4.26
3169 3484 5.697178 TCATGCCATTGAAAAACATGTTCAG 59.303 36.000 12.39 0.00 37.15 3.02
3170 3485 5.608449 TCATGCCATTGAAAAACATGTTCA 58.392 33.333 12.39 2.74 37.15 3.18
3171 3486 6.542574 TTCATGCCATTGAAAAACATGTTC 57.457 33.333 12.39 0.00 37.15 3.18
3172 3487 6.318144 TGTTTCATGCCATTGAAAAACATGTT 59.682 30.769 4.92 4.92 44.71 2.71
3173 3488 5.821470 TGTTTCATGCCATTGAAAAACATGT 59.179 32.000 7.80 0.00 44.71 3.21
3174 3489 6.301687 TGTTTCATGCCATTGAAAAACATG 57.698 33.333 7.80 0.00 44.71 3.21
3175 3490 7.446013 AGAATGTTTCATGCCATTGAAAAACAT 59.554 29.630 10.44 10.44 44.71 2.71
3176 3491 6.766944 AGAATGTTTCATGCCATTGAAAAACA 59.233 30.769 9.03 8.18 44.71 2.83
3177 3492 7.193377 AGAATGTTTCATGCCATTGAAAAAC 57.807 32.000 9.03 3.47 44.71 2.43
3178 3493 7.804843 AAGAATGTTTCATGCCATTGAAAAA 57.195 28.000 9.03 4.32 44.71 1.94
3179 3494 7.804843 AAAGAATGTTTCATGCCATTGAAAA 57.195 28.000 9.03 1.83 44.71 2.29
3180 3495 7.804843 AAAAGAATGTTTCATGCCATTGAAA 57.195 28.000 9.03 3.29 41.92 2.69
3181 3496 7.804843 AAAAAGAATGTTTCATGCCATTGAA 57.195 28.000 9.03 0.00 31.67 2.69
3182 3497 8.772705 GTTAAAAAGAATGTTTCATGCCATTGA 58.227 29.630 9.03 0.00 31.67 2.57
3183 3498 8.776470 AGTTAAAAAGAATGTTTCATGCCATTG 58.224 29.630 9.03 0.00 31.67 2.82
3184 3499 8.907222 AGTTAAAAAGAATGTTTCATGCCATT 57.093 26.923 5.20 5.20 34.11 3.16
3185 3500 9.643693 CTAGTTAAAAAGAATGTTTCATGCCAT 57.356 29.630 0.00 0.00 0.00 4.40
3186 3501 8.855110 TCTAGTTAAAAAGAATGTTTCATGCCA 58.145 29.630 0.00 0.00 0.00 4.92
3187 3502 9.346725 CTCTAGTTAAAAAGAATGTTTCATGCC 57.653 33.333 0.00 0.00 0.00 4.40
3245 3560 9.393512 CCAAAAATAATCATGGCATTTTAGGAA 57.606 29.630 0.00 0.00 32.89 3.36
3246 3561 8.766476 TCCAAAAATAATCATGGCATTTTAGGA 58.234 29.630 0.00 4.67 32.89 2.94
3247 3562 8.961294 TCCAAAAATAATCATGGCATTTTAGG 57.039 30.769 0.00 2.40 32.89 2.69
3253 3568 9.768662 GAACTATTCCAAAAATAATCATGGCAT 57.231 29.630 0.00 0.00 32.87 4.40
3254 3569 8.980596 AGAACTATTCCAAAAATAATCATGGCA 58.019 29.630 0.00 0.00 32.87 4.92
3255 3570 9.252962 CAGAACTATTCCAAAAATAATCATGGC 57.747 33.333 0.00 0.00 32.87 4.40
3256 3571 9.754382 CCAGAACTATTCCAAAAATAATCATGG 57.246 33.333 0.00 0.00 0.00 3.66
3257 3572 9.754382 CCCAGAACTATTCCAAAAATAATCATG 57.246 33.333 0.00 0.00 0.00 3.07
3258 3573 9.713684 TCCCAGAACTATTCCAAAAATAATCAT 57.286 29.630 0.00 0.00 0.00 2.45
3259 3574 9.540538 TTCCCAGAACTATTCCAAAAATAATCA 57.459 29.630 0.00 0.00 0.00 2.57
3261 3576 8.981659 CCTTCCCAGAACTATTCCAAAAATAAT 58.018 33.333 0.00 0.00 0.00 1.28
3262 3577 7.953493 ACCTTCCCAGAACTATTCCAAAAATAA 59.047 33.333 0.00 0.00 0.00 1.40
3263 3578 7.475299 ACCTTCCCAGAACTATTCCAAAAATA 58.525 34.615 0.00 0.00 0.00 1.40
3264 3579 6.322931 ACCTTCCCAGAACTATTCCAAAAAT 58.677 36.000 0.00 0.00 0.00 1.82
3265 3580 5.711698 ACCTTCCCAGAACTATTCCAAAAA 58.288 37.500 0.00 0.00 0.00 1.94
3266 3581 5.333566 ACCTTCCCAGAACTATTCCAAAA 57.666 39.130 0.00 0.00 0.00 2.44
3267 3582 5.074515 AGAACCTTCCCAGAACTATTCCAAA 59.925 40.000 0.00 0.00 0.00 3.28
3268 3583 4.601857 AGAACCTTCCCAGAACTATTCCAA 59.398 41.667 0.00 0.00 0.00 3.53
3269 3584 4.175962 AGAACCTTCCCAGAACTATTCCA 58.824 43.478 0.00 0.00 0.00 3.53
3270 3585 4.846168 AGAACCTTCCCAGAACTATTCC 57.154 45.455 0.00 0.00 0.00 3.01
3271 3586 6.099845 TCCATAGAACCTTCCCAGAACTATTC 59.900 42.308 0.00 0.00 0.00 1.75
3272 3587 5.970640 TCCATAGAACCTTCCCAGAACTATT 59.029 40.000 0.00 0.00 0.00 1.73
3273 3588 5.367060 GTCCATAGAACCTTCCCAGAACTAT 59.633 44.000 0.00 0.00 0.00 2.12
3274 3589 4.715297 GTCCATAGAACCTTCCCAGAACTA 59.285 45.833 0.00 0.00 0.00 2.24
3275 3590 3.519913 GTCCATAGAACCTTCCCAGAACT 59.480 47.826 0.00 0.00 0.00 3.01
3276 3591 3.370633 GGTCCATAGAACCTTCCCAGAAC 60.371 52.174 0.00 0.00 33.78 3.01
3277 3592 2.844348 GGTCCATAGAACCTTCCCAGAA 59.156 50.000 0.00 0.00 33.78 3.02
3278 3593 2.045885 AGGTCCATAGAACCTTCCCAGA 59.954 50.000 0.00 0.00 44.93 3.86
3279 3594 2.171448 CAGGTCCATAGAACCTTCCCAG 59.829 54.545 0.00 0.00 44.93 4.45
3280 3595 2.196595 CAGGTCCATAGAACCTTCCCA 58.803 52.381 0.00 0.00 44.93 4.37


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.