Multiple sequence alignment - TraesCS4A01G435300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G435300 chr4A 100.000 3836 0 0 1 3836 705547398 705543563 0.000000e+00 7084
1 TraesCS4A01G435300 chr4A 85.185 189 21 5 3 187 705607709 705607524 1.820000e-43 187
2 TraesCS4A01G435300 chr3A 100.000 1061 0 0 1302 2362 15466338 15467398 0.000000e+00 1960
3 TraesCS4A01G435300 chr5B 100.000 1060 0 0 1303 2362 418917811 418916752 0.000000e+00 1958
4 TraesCS4A01G435300 chr4B 99.906 1063 1 0 1300 2362 636683787 636684849 0.000000e+00 1958
5 TraesCS4A01G435300 chr2B 99.906 1064 0 1 1303 2366 630736034 630734972 0.000000e+00 1958
6 TraesCS4A01G435300 chr2B 93.688 301 18 1 1917 2216 74359078 74359378 2.100000e-122 449
7 TraesCS4A01G435300 chr3B 99.906 1061 1 0 1302 2362 172057048 172055988 0.000000e+00 1954
8 TraesCS4A01G435300 chr7A 99.812 1064 1 1 1303 2366 122331661 122332723 0.000000e+00 1953
9 TraesCS4A01G435300 chr7A 87.073 967 89 15 2900 3836 22976034 22975074 0.000000e+00 1061
10 TraesCS4A01G435300 chr7A 89.150 553 30 17 2370 2900 22976610 22976066 0.000000e+00 662
11 TraesCS4A01G435300 chr7A 95.283 318 6 1 991 1299 22976932 22976615 2.660000e-136 496
12 TraesCS4A01G435300 chr7A 90.083 242 16 6 596 832 22977513 22977275 1.340000e-79 307
13 TraesCS4A01G435300 chr7D 86.462 975 85 28 2898 3836 22623783 22622820 0.000000e+00 1026
14 TraesCS4A01G435300 chr7D 88.102 748 38 12 596 1303 22625105 22624369 0.000000e+00 841
15 TraesCS4A01G435300 chr7D 94.563 423 22 1 2479 2900 22624235 22623813 0.000000e+00 652
16 TraesCS4A01G435300 chr1D 95.349 602 16 1 1303 1904 387192881 387192292 0.000000e+00 946
17 TraesCS4A01G435300 chr1D 83.219 292 40 3 1018 1303 262287836 262288124 3.800000e-65 259
18 TraesCS4A01G435300 chr1D 78.932 337 63 8 2482 2814 262036691 262037023 4.990000e-54 222
19 TraesCS4A01G435300 chr1D 80.263 304 51 8 1006 1303 262036259 262036559 1.790000e-53 220
20 TraesCS4A01G435300 chr4D 92.904 606 31 5 1303 1904 418533812 418534409 0.000000e+00 870
21 TraesCS4A01G435300 chr4D 92.222 450 19 6 1917 2366 418534500 418534933 1.170000e-174 623
22 TraesCS4A01G435300 chr7B 92.562 605 33 6 1302 1904 92126225 92125631 0.000000e+00 857
23 TraesCS4A01G435300 chr7B 94.137 307 18 0 1917 2223 92125540 92125234 5.800000e-128 468
24 TraesCS4A01G435300 chr7B 91.411 163 9 2 2208 2366 92125217 92125056 6.450000e-53 219
25 TraesCS4A01G435300 chr2A 89.709 447 36 5 1917 2362 355516923 355517360 2.590000e-156 562
26 TraesCS4A01G435300 chr1A 86.842 304 26 8 1006 1302 337776920 337776624 1.030000e-85 327
27 TraesCS4A01G435300 chr1A 81.791 335 61 0 2482 2816 337776511 337776177 8.110000e-72 281
28 TraesCS4A01G435300 chr1A 81.250 304 48 7 1006 1303 337704120 337703820 1.780000e-58 237
29 TraesCS4A01G435300 chr1A 81.570 293 45 3 1016 1302 337658533 337658244 2.300000e-57 233
30 TraesCS4A01G435300 chr1A 79.056 339 59 11 2482 2814 337703685 337703353 4.990000e-54 222
31 TraesCS4A01G435300 chr2D 86.770 257 32 2 342 597 116899527 116899272 6.270000e-73 285
32 TraesCS4A01G435300 chr2D 85.882 255 30 4 342 593 470522222 470522473 2.270000e-67 267
33 TraesCS4A01G435300 chr1B 83.562 292 39 7 1018 1303 349547302 349547014 8.170000e-67 265
34 TraesCS4A01G435300 chr1B 80.592 304 50 7 1006 1303 349596160 349595860 3.860000e-55 226


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G435300 chr4A 705543563 705547398 3835 True 7084.000000 7084 100.000000 1 3836 1 chr4A.!!$R1 3835
1 TraesCS4A01G435300 chr3A 15466338 15467398 1060 False 1960.000000 1960 100.000000 1302 2362 1 chr3A.!!$F1 1060
2 TraesCS4A01G435300 chr5B 418916752 418917811 1059 True 1958.000000 1958 100.000000 1303 2362 1 chr5B.!!$R1 1059
3 TraesCS4A01G435300 chr4B 636683787 636684849 1062 False 1958.000000 1958 99.906000 1300 2362 1 chr4B.!!$F1 1062
4 TraesCS4A01G435300 chr2B 630734972 630736034 1062 True 1958.000000 1958 99.906000 1303 2366 1 chr2B.!!$R1 1063
5 TraesCS4A01G435300 chr3B 172055988 172057048 1060 True 1954.000000 1954 99.906000 1302 2362 1 chr3B.!!$R1 1060
6 TraesCS4A01G435300 chr7A 122331661 122332723 1062 False 1953.000000 1953 99.812000 1303 2366 1 chr7A.!!$F1 1063
7 TraesCS4A01G435300 chr7A 22975074 22977513 2439 True 631.500000 1061 90.397250 596 3836 4 chr7A.!!$R1 3240
8 TraesCS4A01G435300 chr7D 22622820 22625105 2285 True 839.666667 1026 89.709000 596 3836 3 chr7D.!!$R1 3240
9 TraesCS4A01G435300 chr1D 387192292 387192881 589 True 946.000000 946 95.349000 1303 1904 1 chr1D.!!$R1 601
10 TraesCS4A01G435300 chr1D 262036259 262037023 764 False 221.000000 222 79.597500 1006 2814 2 chr1D.!!$F2 1808
11 TraesCS4A01G435300 chr4D 418533812 418534933 1121 False 746.500000 870 92.563000 1303 2366 2 chr4D.!!$F1 1063
12 TraesCS4A01G435300 chr7B 92125056 92126225 1169 True 514.666667 857 92.703333 1302 2366 3 chr7B.!!$R1 1064
13 TraesCS4A01G435300 chr1A 337776177 337776920 743 True 304.000000 327 84.316500 1006 2816 2 chr1A.!!$R3 1810
14 TraesCS4A01G435300 chr1A 337703353 337704120 767 True 229.500000 237 80.153000 1006 2814 2 chr1A.!!$R2 1808

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
102 103 0.036388 TCTTGATCGTTGGACAGGCC 60.036 55.0 0.00 0.0 37.10 5.19 F
406 407 0.040646 AGTATGTCGACCCCACAGGA 59.959 55.0 14.12 0.0 39.89 3.86 F
448 449 0.322187 ACCAACCCCGCAACTACATC 60.322 55.0 0.00 0.0 0.00 3.06 F
454 455 0.389296 CCCGCAACTACATCGTCACA 60.389 55.0 0.00 0.0 0.00 3.58 F
2454 2800 0.096976 CCGTGTTCGTGGCATTGATC 59.903 55.0 0.00 0.0 35.01 2.92 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2368 2713 4.699522 ACGAAGGCGGCCCAGAAC 62.700 66.667 17.02 2.01 43.17 3.01 R
2435 2780 0.096976 GATCAATGCCACGAACACGG 59.903 55.000 0.00 0.00 0.00 4.94 R
2454 2800 1.067283 ACAGATGTCCACAAGAGCTCG 60.067 52.381 8.37 0.00 0.00 5.03 R
2566 2955 1.617947 GCTCCGTCCAGGGTCTTCAT 61.618 60.000 0.00 0.00 41.52 2.57 R
3735 4194 0.890996 CTTTCCTGGCCTTCTTGCGT 60.891 55.000 3.32 0.00 0.00 5.24 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
82 83 5.360649 TTTTTGGAAAGGTTGTAAAGGGG 57.639 39.130 0.00 0.00 0.00 4.79
83 84 3.691698 TTGGAAAGGTTGTAAAGGGGT 57.308 42.857 0.00 0.00 0.00 4.95
84 85 3.232720 TGGAAAGGTTGTAAAGGGGTC 57.767 47.619 0.00 0.00 0.00 4.46
85 86 2.787035 TGGAAAGGTTGTAAAGGGGTCT 59.213 45.455 0.00 0.00 0.00 3.85
86 87 3.205733 TGGAAAGGTTGTAAAGGGGTCTT 59.794 43.478 0.00 0.00 34.07 3.01
87 88 3.572682 GGAAAGGTTGTAAAGGGGTCTTG 59.427 47.826 0.00 0.00 32.75 3.02
88 89 4.466827 GAAAGGTTGTAAAGGGGTCTTGA 58.533 43.478 0.00 0.00 32.75 3.02
89 90 4.741928 AAGGTTGTAAAGGGGTCTTGAT 57.258 40.909 0.00 0.00 32.75 2.57
90 91 4.302559 AGGTTGTAAAGGGGTCTTGATC 57.697 45.455 0.00 0.00 32.75 2.92
91 92 3.007635 GGTTGTAAAGGGGTCTTGATCG 58.992 50.000 0.00 0.00 32.75 3.69
92 93 3.558533 GGTTGTAAAGGGGTCTTGATCGT 60.559 47.826 0.00 0.00 32.75 3.73
93 94 4.070009 GTTGTAAAGGGGTCTTGATCGTT 58.930 43.478 0.00 0.00 32.75 3.85
94 95 3.670625 TGTAAAGGGGTCTTGATCGTTG 58.329 45.455 0.00 0.00 32.75 4.10
95 96 2.200373 AAAGGGGTCTTGATCGTTGG 57.800 50.000 0.00 0.00 32.75 3.77
96 97 1.358152 AAGGGGTCTTGATCGTTGGA 58.642 50.000 0.00 0.00 0.00 3.53
97 98 0.613777 AGGGGTCTTGATCGTTGGAC 59.386 55.000 0.00 0.00 0.00 4.02
98 99 0.323629 GGGGTCTTGATCGTTGGACA 59.676 55.000 8.60 0.00 0.00 4.02
99 100 1.676014 GGGGTCTTGATCGTTGGACAG 60.676 57.143 8.60 0.00 0.00 3.51
100 101 1.676014 GGGTCTTGATCGTTGGACAGG 60.676 57.143 8.60 0.00 0.00 4.00
101 102 1.079503 GTCTTGATCGTTGGACAGGC 58.920 55.000 0.00 0.00 0.00 4.85
102 103 0.036388 TCTTGATCGTTGGACAGGCC 60.036 55.000 0.00 0.00 37.10 5.19
103 104 1.002624 TTGATCGTTGGACAGGCCC 60.003 57.895 0.00 0.00 34.97 5.80
104 105 1.488705 TTGATCGTTGGACAGGCCCT 61.489 55.000 0.00 0.00 34.97 5.19
105 106 0.616395 TGATCGTTGGACAGGCCCTA 60.616 55.000 0.00 0.00 34.97 3.53
106 107 0.759346 GATCGTTGGACAGGCCCTAT 59.241 55.000 0.00 0.00 34.97 2.57
107 108 0.759346 ATCGTTGGACAGGCCCTATC 59.241 55.000 0.00 0.00 34.97 2.08
108 109 1.146263 CGTTGGACAGGCCCTATCC 59.854 63.158 0.00 0.00 34.97 2.59
109 110 1.338136 CGTTGGACAGGCCCTATCCT 61.338 60.000 10.00 0.00 36.78 3.24
110 111 1.802553 GTTGGACAGGCCCTATCCTA 58.197 55.000 10.00 0.00 33.95 2.94
111 112 2.339769 GTTGGACAGGCCCTATCCTAT 58.660 52.381 10.00 0.00 33.95 2.57
112 113 2.030027 TGGACAGGCCCTATCCTATG 57.970 55.000 10.00 1.30 33.95 2.23
113 114 0.615850 GGACAGGCCCTATCCTATGC 59.384 60.000 0.00 0.00 33.95 3.14
114 115 1.650528 GACAGGCCCTATCCTATGCT 58.349 55.000 0.00 0.00 33.95 3.79
115 116 1.277557 GACAGGCCCTATCCTATGCTG 59.722 57.143 0.00 0.00 33.95 4.41
116 117 1.356124 CAGGCCCTATCCTATGCTGT 58.644 55.000 0.00 0.00 33.95 4.40
117 118 1.277557 CAGGCCCTATCCTATGCTGTC 59.722 57.143 0.00 0.00 33.95 3.51
118 119 0.247736 GGCCCTATCCTATGCTGTCG 59.752 60.000 0.00 0.00 0.00 4.35
119 120 0.969894 GCCCTATCCTATGCTGTCGT 59.030 55.000 0.00 0.00 0.00 4.34
120 121 1.337260 GCCCTATCCTATGCTGTCGTG 60.337 57.143 0.00 0.00 0.00 4.35
121 122 1.964223 CCCTATCCTATGCTGTCGTGT 59.036 52.381 0.00 0.00 0.00 4.49
122 123 3.154710 CCCTATCCTATGCTGTCGTGTA 58.845 50.000 0.00 0.00 0.00 2.90
123 124 3.191581 CCCTATCCTATGCTGTCGTGTAG 59.808 52.174 0.00 0.00 0.00 2.74
124 125 3.821600 CCTATCCTATGCTGTCGTGTAGT 59.178 47.826 0.00 0.00 0.00 2.73
125 126 5.001874 CCTATCCTATGCTGTCGTGTAGTA 58.998 45.833 0.00 0.00 0.00 1.82
126 127 5.472478 CCTATCCTATGCTGTCGTGTAGTAA 59.528 44.000 0.00 0.00 0.00 2.24
127 128 6.151312 CCTATCCTATGCTGTCGTGTAGTAAT 59.849 42.308 0.00 0.00 0.00 1.89
128 129 7.336176 CCTATCCTATGCTGTCGTGTAGTAATA 59.664 40.741 0.00 0.00 0.00 0.98
129 130 6.555812 TCCTATGCTGTCGTGTAGTAATAG 57.444 41.667 0.00 0.00 0.00 1.73
130 131 5.472478 TCCTATGCTGTCGTGTAGTAATAGG 59.528 44.000 0.00 0.00 36.48 2.57
131 132 4.585955 ATGCTGTCGTGTAGTAATAGGG 57.414 45.455 0.00 0.00 0.00 3.53
132 133 2.691526 TGCTGTCGTGTAGTAATAGGGG 59.308 50.000 0.00 0.00 0.00 4.79
133 134 2.035576 GCTGTCGTGTAGTAATAGGGGG 59.964 54.545 0.00 0.00 0.00 5.40
134 135 3.294214 CTGTCGTGTAGTAATAGGGGGT 58.706 50.000 0.00 0.00 0.00 4.95
135 136 4.464008 CTGTCGTGTAGTAATAGGGGGTA 58.536 47.826 0.00 0.00 0.00 3.69
136 137 5.065613 TGTCGTGTAGTAATAGGGGGTAT 57.934 43.478 0.00 0.00 0.00 2.73
137 138 4.828939 TGTCGTGTAGTAATAGGGGGTATG 59.171 45.833 0.00 0.00 0.00 2.39
138 139 3.828451 TCGTGTAGTAATAGGGGGTATGC 59.172 47.826 0.00 0.00 0.00 3.14
139 140 3.575256 CGTGTAGTAATAGGGGGTATGCA 59.425 47.826 0.00 0.00 0.00 3.96
140 141 4.222145 CGTGTAGTAATAGGGGGTATGCAT 59.778 45.833 3.79 3.79 0.00 3.96
141 142 5.488341 GTGTAGTAATAGGGGGTATGCATG 58.512 45.833 10.16 0.00 0.00 4.06
142 143 4.534500 TGTAGTAATAGGGGGTATGCATGG 59.466 45.833 10.16 0.00 0.00 3.66
143 144 3.609162 AGTAATAGGGGGTATGCATGGT 58.391 45.455 10.16 0.00 0.00 3.55
144 145 4.770193 AGTAATAGGGGGTATGCATGGTA 58.230 43.478 10.16 0.00 0.00 3.25
145 146 5.359173 AGTAATAGGGGGTATGCATGGTAT 58.641 41.667 10.16 0.00 0.00 2.73
146 147 5.795870 AGTAATAGGGGGTATGCATGGTATT 59.204 40.000 10.16 5.98 0.00 1.89
147 148 5.615335 AATAGGGGGTATGCATGGTATTT 57.385 39.130 10.16 0.00 0.00 1.40
148 149 3.525800 AGGGGGTATGCATGGTATTTC 57.474 47.619 10.16 0.00 0.00 2.17
149 150 2.110011 AGGGGGTATGCATGGTATTTCC 59.890 50.000 10.16 2.04 0.00 3.13
150 151 2.110011 GGGGGTATGCATGGTATTTCCT 59.890 50.000 10.16 0.00 37.07 3.36
151 152 3.332485 GGGGGTATGCATGGTATTTCCTA 59.668 47.826 10.16 0.00 37.07 2.94
152 153 4.017499 GGGGGTATGCATGGTATTTCCTAT 60.017 45.833 10.16 0.00 37.07 2.57
153 154 5.518367 GGGGGTATGCATGGTATTTCCTATT 60.518 44.000 10.16 0.00 37.07 1.73
154 155 5.652452 GGGGTATGCATGGTATTTCCTATTC 59.348 44.000 10.16 0.00 37.07 1.75
155 156 6.485171 GGGTATGCATGGTATTTCCTATTCT 58.515 40.000 10.16 0.00 37.07 2.40
156 157 6.375455 GGGTATGCATGGTATTTCCTATTCTG 59.625 42.308 10.16 0.00 37.07 3.02
157 158 5.972107 ATGCATGGTATTTCCTATTCTGC 57.028 39.130 0.00 0.00 37.07 4.26
158 159 4.790937 TGCATGGTATTTCCTATTCTGCA 58.209 39.130 0.00 0.00 37.07 4.41
159 160 4.580167 TGCATGGTATTTCCTATTCTGCAC 59.420 41.667 0.00 0.00 37.07 4.57
160 161 4.823989 GCATGGTATTTCCTATTCTGCACT 59.176 41.667 0.00 0.00 37.07 4.40
161 162 5.300286 GCATGGTATTTCCTATTCTGCACTT 59.700 40.000 0.00 0.00 37.07 3.16
162 163 6.183360 GCATGGTATTTCCTATTCTGCACTTT 60.183 38.462 0.00 0.00 37.07 2.66
163 164 7.013274 GCATGGTATTTCCTATTCTGCACTTTA 59.987 37.037 0.00 0.00 37.07 1.85
164 165 8.562892 CATGGTATTTCCTATTCTGCACTTTAG 58.437 37.037 0.00 0.00 37.07 1.85
165 166 7.054124 TGGTATTTCCTATTCTGCACTTTAGG 58.946 38.462 5.18 5.18 37.07 2.69
166 167 6.017026 GGTATTTCCTATTCTGCACTTTAGGC 60.017 42.308 6.31 0.00 32.83 3.93
167 168 3.179443 TCCTATTCTGCACTTTAGGCG 57.821 47.619 6.31 0.00 32.83 5.52
168 169 1.599542 CCTATTCTGCACTTTAGGCGC 59.400 52.381 0.00 0.00 0.00 6.53
169 170 1.599542 CTATTCTGCACTTTAGGCGCC 59.400 52.381 21.89 21.89 0.00 6.53
170 171 1.369091 ATTCTGCACTTTAGGCGCCG 61.369 55.000 23.20 9.47 0.00 6.46
171 172 2.725203 TTCTGCACTTTAGGCGCCGT 62.725 55.000 23.20 10.26 0.00 5.68
172 173 2.281208 TGCACTTTAGGCGCCGTT 60.281 55.556 23.20 7.21 0.00 4.44
173 174 1.004799 TGCACTTTAGGCGCCGTTA 60.005 52.632 23.20 5.95 0.00 3.18
174 175 1.293267 TGCACTTTAGGCGCCGTTAC 61.293 55.000 23.20 8.82 0.00 2.50
175 176 1.293267 GCACTTTAGGCGCCGTTACA 61.293 55.000 23.20 0.47 0.00 2.41
176 177 0.719465 CACTTTAGGCGCCGTTACAG 59.281 55.000 23.20 13.79 0.00 2.74
177 178 0.319405 ACTTTAGGCGCCGTTACAGT 59.681 50.000 23.20 14.47 0.00 3.55
178 179 1.545582 ACTTTAGGCGCCGTTACAGTA 59.454 47.619 23.20 2.40 0.00 2.74
179 180 2.167075 ACTTTAGGCGCCGTTACAGTAT 59.833 45.455 23.20 1.83 0.00 2.12
180 181 3.381272 ACTTTAGGCGCCGTTACAGTATA 59.619 43.478 23.20 0.65 0.00 1.47
181 182 4.142182 ACTTTAGGCGCCGTTACAGTATAA 60.142 41.667 23.20 7.90 0.00 0.98
182 183 2.965572 AGGCGCCGTTACAGTATAAA 57.034 45.000 23.20 0.00 0.00 1.40
183 184 2.543641 AGGCGCCGTTACAGTATAAAC 58.456 47.619 23.20 0.00 0.00 2.01
184 185 2.167075 AGGCGCCGTTACAGTATAAACT 59.833 45.455 23.20 0.00 35.91 2.66
185 186 3.381272 AGGCGCCGTTACAGTATAAACTA 59.619 43.478 23.20 0.00 33.48 2.24
186 187 3.487207 GGCGCCGTTACAGTATAAACTAC 59.513 47.826 12.58 0.00 33.48 2.73
187 188 4.104776 GCGCCGTTACAGTATAAACTACA 58.895 43.478 0.00 0.00 33.48 2.74
188 189 4.562394 GCGCCGTTACAGTATAAACTACAA 59.438 41.667 0.00 0.00 33.48 2.41
189 190 5.062058 GCGCCGTTACAGTATAAACTACAAA 59.938 40.000 0.00 0.00 33.48 2.83
190 191 6.460987 CGCCGTTACAGTATAAACTACAAAC 58.539 40.000 0.00 0.00 33.48 2.93
191 192 6.460987 GCCGTTACAGTATAAACTACAAACG 58.539 40.000 0.00 0.00 40.41 3.60
192 193 6.981708 CCGTTACAGTATAAACTACAAACGG 58.018 40.000 16.73 16.73 46.45 4.44
193 194 6.034898 CCGTTACAGTATAAACTACAAACGGG 59.965 42.308 19.81 9.50 47.00 5.28
194 195 6.454186 CGTTACAGTATAAACTACAAACGGGC 60.454 42.308 0.00 0.00 38.86 6.13
195 196 3.928375 ACAGTATAAACTACAAACGGGCG 59.072 43.478 0.00 0.00 33.48 6.13
196 197 2.931969 AGTATAAACTACAAACGGGCGC 59.068 45.455 0.00 0.00 32.84 6.53
197 198 1.810959 ATAAACTACAAACGGGCGCA 58.189 45.000 10.83 0.00 0.00 6.09
198 199 0.867086 TAAACTACAAACGGGCGCAC 59.133 50.000 10.83 3.71 0.00 5.34
199 200 1.096386 AAACTACAAACGGGCGCACA 61.096 50.000 11.77 0.00 0.00 4.57
200 201 1.778027 AACTACAAACGGGCGCACAC 61.778 55.000 11.77 0.00 0.00 3.82
201 202 3.289816 CTACAAACGGGCGCACACG 62.290 63.158 11.77 13.89 44.07 4.49
213 214 2.972505 CACACGCCCGCTTCACTT 60.973 61.111 0.00 0.00 0.00 3.16
214 215 2.203153 ACACGCCCGCTTCACTTT 60.203 55.556 0.00 0.00 0.00 2.66
215 216 1.070105 ACACGCCCGCTTCACTTTA 59.930 52.632 0.00 0.00 0.00 1.85
216 217 0.949105 ACACGCCCGCTTCACTTTAG 60.949 55.000 0.00 0.00 0.00 1.85
217 218 1.375523 ACGCCCGCTTCACTTTAGG 60.376 57.895 0.00 0.00 0.00 2.69
218 219 2.750888 CGCCCGCTTCACTTTAGGC 61.751 63.158 0.00 0.00 37.03 3.93
219 220 1.674322 GCCCGCTTCACTTTAGGCA 60.674 57.895 0.00 0.00 40.20 4.75
220 221 1.032114 GCCCGCTTCACTTTAGGCAT 61.032 55.000 0.00 0.00 40.20 4.40
221 222 1.463674 CCCGCTTCACTTTAGGCATT 58.536 50.000 0.00 0.00 0.00 3.56
222 223 1.818674 CCCGCTTCACTTTAGGCATTT 59.181 47.619 0.00 0.00 0.00 2.32
223 224 2.231235 CCCGCTTCACTTTAGGCATTTT 59.769 45.455 0.00 0.00 0.00 1.82
224 225 3.442273 CCCGCTTCACTTTAGGCATTTTA 59.558 43.478 0.00 0.00 0.00 1.52
225 226 4.097892 CCCGCTTCACTTTAGGCATTTTAT 59.902 41.667 0.00 0.00 0.00 1.40
226 227 5.298276 CCCGCTTCACTTTAGGCATTTTATA 59.702 40.000 0.00 0.00 0.00 0.98
227 228 6.183360 CCCGCTTCACTTTAGGCATTTTATAA 60.183 38.462 0.00 0.00 0.00 0.98
228 229 7.254852 CCGCTTCACTTTAGGCATTTTATAAA 58.745 34.615 0.00 0.00 0.00 1.40
229 230 7.757624 CCGCTTCACTTTAGGCATTTTATAAAA 59.242 33.333 12.85 12.85 0.00 1.52
230 231 9.301153 CGCTTCACTTTAGGCATTTTATAAAAT 57.699 29.630 16.15 16.15 39.07 1.82
315 316 9.504708 AAAATGGCATCTTTTTGATAAATGTGA 57.495 25.926 0.00 0.00 33.36 3.58
316 317 9.675464 AAATGGCATCTTTTTGATAAATGTGAT 57.325 25.926 0.00 0.00 33.36 3.06
318 319 9.976511 ATGGCATCTTTTTGATAAATGTGATAG 57.023 29.630 0.00 0.00 33.36 2.08
319 320 7.922278 TGGCATCTTTTTGATAAATGTGATAGC 59.078 33.333 0.00 0.00 33.36 2.97
320 321 8.139989 GGCATCTTTTTGATAAATGTGATAGCT 58.860 33.333 0.00 0.00 33.36 3.32
321 322 9.525409 GCATCTTTTTGATAAATGTGATAGCTT 57.475 29.630 0.00 0.00 33.36 3.74
330 331 9.806203 TGATAAATGTGATAGCTTTTGAAATGG 57.194 29.630 0.00 0.00 0.00 3.16
331 332 9.807649 GATAAATGTGATAGCTTTTGAAATGGT 57.192 29.630 0.00 1.27 0.00 3.55
333 334 8.986477 AAATGTGATAGCTTTTGAAATGGTAC 57.014 30.769 5.09 0.00 0.00 3.34
351 352 3.741344 GGTACATACCGTTGATGATCTGC 59.259 47.826 0.00 0.00 36.50 4.26
352 353 3.541996 ACATACCGTTGATGATCTGCA 57.458 42.857 0.00 0.00 0.00 4.41
353 354 3.872696 ACATACCGTTGATGATCTGCAA 58.127 40.909 0.00 0.00 0.00 4.08
354 355 3.873361 ACATACCGTTGATGATCTGCAAG 59.127 43.478 0.00 0.00 0.00 4.01
355 356 1.742761 ACCGTTGATGATCTGCAAGG 58.257 50.000 11.38 11.38 0.00 3.61
356 357 1.019673 CCGTTGATGATCTGCAAGGG 58.980 55.000 18.52 18.52 41.72 3.95
357 358 0.379669 CGTTGATGATCTGCAAGGGC 59.620 55.000 10.81 0.00 41.68 5.19
369 370 1.944032 GCAAGGGCAAATGGCTATTG 58.056 50.000 15.74 15.74 44.01 1.90
380 381 3.420943 GCTATTGCCATTCGCGGT 58.579 55.556 6.13 0.00 42.08 5.68
381 382 2.612200 GCTATTGCCATTCGCGGTA 58.388 52.632 6.13 0.00 42.08 4.02
382 383 0.941542 GCTATTGCCATTCGCGGTAA 59.058 50.000 6.13 0.00 42.08 2.85
383 384 1.069906 GCTATTGCCATTCGCGGTAAG 60.070 52.381 6.13 0.00 42.08 2.34
384 385 2.210116 CTATTGCCATTCGCGGTAAGT 58.790 47.619 6.13 0.00 42.08 2.24
385 386 2.319136 ATTGCCATTCGCGGTAAGTA 57.681 45.000 6.13 0.00 42.08 2.24
386 387 1.647346 TTGCCATTCGCGGTAAGTAG 58.353 50.000 6.13 0.00 42.08 2.57
387 388 0.818938 TGCCATTCGCGGTAAGTAGA 59.181 50.000 6.13 0.00 42.08 2.59
388 389 1.202371 TGCCATTCGCGGTAAGTAGAG 60.202 52.381 6.13 0.00 42.08 2.43
389 390 1.202382 GCCATTCGCGGTAAGTAGAGT 60.202 52.381 6.13 0.00 0.00 3.24
390 391 2.033801 GCCATTCGCGGTAAGTAGAGTA 59.966 50.000 6.13 0.00 0.00 2.59
391 392 3.305199 GCCATTCGCGGTAAGTAGAGTAT 60.305 47.826 6.13 0.00 0.00 2.12
392 393 4.227538 CCATTCGCGGTAAGTAGAGTATG 58.772 47.826 6.13 0.00 0.00 2.39
393 394 4.261489 CCATTCGCGGTAAGTAGAGTATGT 60.261 45.833 6.13 0.00 0.00 2.29
394 395 4.542662 TTCGCGGTAAGTAGAGTATGTC 57.457 45.455 6.13 0.00 0.00 3.06
395 396 2.541346 TCGCGGTAAGTAGAGTATGTCG 59.459 50.000 6.13 0.00 0.00 4.35
396 397 2.541346 CGCGGTAAGTAGAGTATGTCGA 59.459 50.000 0.00 0.00 0.00 4.20
397 398 3.603401 CGCGGTAAGTAGAGTATGTCGAC 60.603 52.174 9.11 9.11 0.00 4.20
398 399 3.303659 GCGGTAAGTAGAGTATGTCGACC 60.304 52.174 14.12 0.00 31.33 4.79
399 400 3.249559 CGGTAAGTAGAGTATGTCGACCC 59.750 52.174 14.12 0.65 31.33 4.46
400 401 3.567585 GGTAAGTAGAGTATGTCGACCCC 59.432 52.174 14.12 0.25 31.33 4.95
401 402 3.377253 AAGTAGAGTATGTCGACCCCA 57.623 47.619 14.12 0.00 31.33 4.96
402 403 2.652590 AGTAGAGTATGTCGACCCCAC 58.347 52.381 14.12 8.09 31.33 4.61
403 404 2.025605 AGTAGAGTATGTCGACCCCACA 60.026 50.000 14.12 0.00 31.33 4.17
404 405 1.475403 AGAGTATGTCGACCCCACAG 58.525 55.000 14.12 0.00 0.00 3.66
405 406 0.460311 GAGTATGTCGACCCCACAGG 59.540 60.000 14.12 0.00 43.78 4.00
406 407 0.040646 AGTATGTCGACCCCACAGGA 59.959 55.000 14.12 0.00 39.89 3.86
407 408 0.899720 GTATGTCGACCCCACAGGAA 59.100 55.000 14.12 0.00 39.89 3.36
408 409 1.134788 GTATGTCGACCCCACAGGAAG 60.135 57.143 14.12 0.00 39.89 3.46
409 410 2.047179 GTCGACCCCACAGGAAGC 60.047 66.667 3.51 0.00 39.89 3.86
410 411 2.525629 TCGACCCCACAGGAAGCA 60.526 61.111 0.00 0.00 39.89 3.91
411 412 2.046892 CGACCCCACAGGAAGCAG 60.047 66.667 0.00 0.00 39.89 4.24
412 413 2.883828 CGACCCCACAGGAAGCAGT 61.884 63.158 0.00 0.00 39.89 4.40
413 414 1.302832 GACCCCACAGGAAGCAGTG 60.303 63.158 0.00 0.00 39.89 3.66
417 418 3.957260 CACAGGAAGCAGTGGTCG 58.043 61.111 0.00 0.00 32.24 4.79
418 419 2.031163 ACAGGAAGCAGTGGTCGC 59.969 61.111 0.00 0.00 0.00 5.19
419 420 2.031012 CAGGAAGCAGTGGTCGCA 59.969 61.111 0.00 0.00 0.00 5.10
420 421 2.031163 AGGAAGCAGTGGTCGCAC 59.969 61.111 0.00 0.00 0.00 5.34
421 422 2.031163 GGAAGCAGTGGTCGCACT 59.969 61.111 0.00 0.00 35.49 4.40
427 428 3.299050 CAGTGGTCGCACTGGTAAA 57.701 52.632 13.55 0.00 46.37 2.01
428 429 1.808411 CAGTGGTCGCACTGGTAAAT 58.192 50.000 13.55 0.00 46.37 1.40
429 430 2.967362 CAGTGGTCGCACTGGTAAATA 58.033 47.619 13.55 0.00 46.37 1.40
430 431 2.671396 CAGTGGTCGCACTGGTAAATAC 59.329 50.000 13.55 0.00 46.37 1.89
431 432 2.004733 GTGGTCGCACTGGTAAATACC 58.995 52.381 2.53 2.53 46.62 2.73
440 441 3.573626 GGTAAATACCAACCCCGCA 57.426 52.632 4.72 0.00 45.73 5.69
441 442 1.836802 GGTAAATACCAACCCCGCAA 58.163 50.000 4.72 0.00 45.73 4.85
442 443 1.473677 GGTAAATACCAACCCCGCAAC 59.526 52.381 4.72 0.00 45.73 4.17
443 444 2.439409 GTAAATACCAACCCCGCAACT 58.561 47.619 0.00 0.00 0.00 3.16
444 445 2.883122 AAATACCAACCCCGCAACTA 57.117 45.000 0.00 0.00 0.00 2.24
445 446 2.118313 AATACCAACCCCGCAACTAC 57.882 50.000 0.00 0.00 0.00 2.73
446 447 0.985760 ATACCAACCCCGCAACTACA 59.014 50.000 0.00 0.00 0.00 2.74
447 448 0.985760 TACCAACCCCGCAACTACAT 59.014 50.000 0.00 0.00 0.00 2.29
448 449 0.322187 ACCAACCCCGCAACTACATC 60.322 55.000 0.00 0.00 0.00 3.06
449 450 1.366111 CCAACCCCGCAACTACATCG 61.366 60.000 0.00 0.00 0.00 3.84
450 451 0.672401 CAACCCCGCAACTACATCGT 60.672 55.000 0.00 0.00 0.00 3.73
451 452 0.390735 AACCCCGCAACTACATCGTC 60.391 55.000 0.00 0.00 0.00 4.20
452 453 1.216977 CCCCGCAACTACATCGTCA 59.783 57.895 0.00 0.00 0.00 4.35
453 454 1.082117 CCCCGCAACTACATCGTCAC 61.082 60.000 0.00 0.00 0.00 3.67
454 455 0.389296 CCCGCAACTACATCGTCACA 60.389 55.000 0.00 0.00 0.00 3.58
455 456 0.713883 CCGCAACTACATCGTCACAC 59.286 55.000 0.00 0.00 0.00 3.82
456 457 1.414378 CGCAACTACATCGTCACACA 58.586 50.000 0.00 0.00 0.00 3.72
457 458 1.992667 CGCAACTACATCGTCACACAT 59.007 47.619 0.00 0.00 0.00 3.21
458 459 2.222574 CGCAACTACATCGTCACACATG 60.223 50.000 0.00 0.00 0.00 3.21
459 460 2.474526 GCAACTACATCGTCACACATGC 60.475 50.000 0.00 0.00 0.00 4.06
460 461 1.629013 ACTACATCGTCACACATGCG 58.371 50.000 0.00 0.00 0.00 4.73
461 462 0.923403 CTACATCGTCACACATGCGG 59.077 55.000 0.00 0.00 0.00 5.69
462 463 1.081556 TACATCGTCACACATGCGGC 61.082 55.000 0.00 0.00 0.00 6.53
463 464 2.102438 CATCGTCACACATGCGGCT 61.102 57.895 0.00 0.00 0.00 5.52
464 465 0.805711 CATCGTCACACATGCGGCTA 60.806 55.000 0.00 0.00 0.00 3.93
465 466 0.806102 ATCGTCACACATGCGGCTAC 60.806 55.000 0.00 0.00 0.00 3.58
466 467 2.788176 CGTCACACATGCGGCTACG 61.788 63.158 0.00 0.00 44.63 3.51
467 468 1.736645 GTCACACATGCGGCTACGT 60.737 57.895 0.00 0.00 43.45 3.57
468 469 1.005512 TCACACATGCGGCTACGTT 60.006 52.632 0.00 0.00 43.45 3.99
469 470 1.011968 TCACACATGCGGCTACGTTC 61.012 55.000 0.00 0.00 43.45 3.95
470 471 1.005512 ACACATGCGGCTACGTTCA 60.006 52.632 0.00 0.00 43.45 3.18
471 472 1.289109 ACACATGCGGCTACGTTCAC 61.289 55.000 0.00 0.00 43.45 3.18
472 473 1.005512 ACATGCGGCTACGTTCACA 60.006 52.632 0.00 0.00 43.45 3.58
473 474 1.289109 ACATGCGGCTACGTTCACAC 61.289 55.000 0.00 0.00 43.45 3.82
474 475 1.740296 ATGCGGCTACGTTCACACC 60.740 57.895 0.00 0.00 43.45 4.16
475 476 3.116531 GCGGCTACGTTCACACCC 61.117 66.667 0.00 0.00 43.45 4.61
476 477 2.340809 CGGCTACGTTCACACCCA 59.659 61.111 0.00 0.00 34.81 4.51
477 478 1.301087 CGGCTACGTTCACACCCAA 60.301 57.895 0.00 0.00 34.81 4.12
478 479 0.881159 CGGCTACGTTCACACCCAAA 60.881 55.000 0.00 0.00 34.81 3.28
479 480 1.310904 GGCTACGTTCACACCCAAAA 58.689 50.000 0.00 0.00 0.00 2.44
480 481 1.002142 GGCTACGTTCACACCCAAAAC 60.002 52.381 0.00 0.00 0.00 2.43
485 486 3.612472 CGTTCACACCCAAAACGTTAT 57.388 42.857 0.00 0.00 40.51 1.89
486 487 3.547601 CGTTCACACCCAAAACGTTATC 58.452 45.455 0.00 0.00 40.51 1.75
487 488 3.249080 CGTTCACACCCAAAACGTTATCT 59.751 43.478 0.00 0.00 40.51 1.98
488 489 4.533222 GTTCACACCCAAAACGTTATCTG 58.467 43.478 0.00 0.00 0.00 2.90
489 490 3.142951 TCACACCCAAAACGTTATCTGG 58.857 45.455 14.19 14.19 0.00 3.86
490 491 3.142951 CACACCCAAAACGTTATCTGGA 58.857 45.455 20.10 0.00 0.00 3.86
491 492 3.566322 CACACCCAAAACGTTATCTGGAA 59.434 43.478 20.10 0.00 0.00 3.53
492 493 4.036971 CACACCCAAAACGTTATCTGGAAA 59.963 41.667 20.10 0.00 0.00 3.13
493 494 4.830600 ACACCCAAAACGTTATCTGGAAAT 59.169 37.500 20.10 7.26 0.00 2.17
494 495 6.005198 ACACCCAAAACGTTATCTGGAAATA 58.995 36.000 20.10 0.00 0.00 1.40
495 496 6.150474 ACACCCAAAACGTTATCTGGAAATAG 59.850 38.462 20.10 9.35 0.00 1.73
496 497 6.150474 CACCCAAAACGTTATCTGGAAATAGT 59.850 38.462 20.10 9.83 0.00 2.12
497 498 6.373495 ACCCAAAACGTTATCTGGAAATAGTC 59.627 38.462 20.10 0.00 0.00 2.59
498 499 6.598064 CCCAAAACGTTATCTGGAAATAGTCT 59.402 38.462 20.10 0.00 0.00 3.24
499 500 7.767198 CCCAAAACGTTATCTGGAAATAGTCTA 59.233 37.037 20.10 0.00 0.00 2.59
500 501 9.326413 CCAAAACGTTATCTGGAAATAGTCTAT 57.674 33.333 15.50 0.00 0.00 1.98
502 503 9.543783 AAAACGTTATCTGGAAATAGTCTATCC 57.456 33.333 0.00 0.00 0.00 2.59
503 504 6.910995 ACGTTATCTGGAAATAGTCTATCCG 58.089 40.000 0.00 0.00 35.96 4.18
504 505 6.489361 ACGTTATCTGGAAATAGTCTATCCGT 59.511 38.462 0.00 0.00 35.96 4.69
505 506 7.014038 ACGTTATCTGGAAATAGTCTATCCGTT 59.986 37.037 0.00 0.00 35.96 4.44
506 507 7.326305 CGTTATCTGGAAATAGTCTATCCGTTG 59.674 40.741 0.00 0.00 35.96 4.10
507 508 5.531122 TCTGGAAATAGTCTATCCGTTGG 57.469 43.478 0.00 0.00 35.96 3.77
508 509 4.960469 TCTGGAAATAGTCTATCCGTTGGT 59.040 41.667 0.00 0.00 35.96 3.67
509 510 5.424252 TCTGGAAATAGTCTATCCGTTGGTT 59.576 40.000 0.00 0.00 35.96 3.67
510 511 5.424757 TGGAAATAGTCTATCCGTTGGTTG 58.575 41.667 0.00 0.00 35.96 3.77
511 512 4.272748 GGAAATAGTCTATCCGTTGGTTGC 59.727 45.833 0.00 0.00 0.00 4.17
512 513 4.755266 AATAGTCTATCCGTTGGTTGCT 57.245 40.909 0.00 0.00 0.00 3.91
513 514 5.864418 AATAGTCTATCCGTTGGTTGCTA 57.136 39.130 0.00 0.00 0.00 3.49
514 515 5.864418 ATAGTCTATCCGTTGGTTGCTAA 57.136 39.130 0.00 0.00 0.00 3.09
515 516 3.858247 AGTCTATCCGTTGGTTGCTAAC 58.142 45.455 0.00 0.00 0.00 2.34
532 533 8.007405 GTTGCTAACCAAATGATAATAAGGGT 57.993 34.615 0.00 0.00 34.68 4.34
533 534 7.581213 TGCTAACCAAATGATAATAAGGGTG 57.419 36.000 0.00 0.00 0.00 4.61
534 535 6.549364 TGCTAACCAAATGATAATAAGGGTGG 59.451 38.462 0.00 0.00 0.00 4.61
535 536 6.549736 GCTAACCAAATGATAATAAGGGTGGT 59.450 38.462 0.00 0.00 39.79 4.16
536 537 7.069455 GCTAACCAAATGATAATAAGGGTGGTT 59.931 37.037 9.47 9.47 46.82 3.67
537 538 7.806680 AACCAAATGATAATAAGGGTGGTTT 57.193 32.000 0.00 0.00 43.76 3.27
538 539 7.806680 ACCAAATGATAATAAGGGTGGTTTT 57.193 32.000 0.00 0.00 34.49 2.43
539 540 7.619965 ACCAAATGATAATAAGGGTGGTTTTG 58.380 34.615 0.00 0.00 34.49 2.44
540 541 7.236640 ACCAAATGATAATAAGGGTGGTTTTGT 59.763 33.333 0.00 0.00 34.49 2.83
541 542 7.763985 CCAAATGATAATAAGGGTGGTTTTGTC 59.236 37.037 0.00 0.00 0.00 3.18
542 543 8.531146 CAAATGATAATAAGGGTGGTTTTGTCT 58.469 33.333 0.00 0.00 0.00 3.41
543 544 8.664669 AATGATAATAAGGGTGGTTTTGTCTT 57.335 30.769 0.00 0.00 0.00 3.01
544 545 9.762381 AATGATAATAAGGGTGGTTTTGTCTTA 57.238 29.630 0.00 0.00 0.00 2.10
545 546 9.762381 ATGATAATAAGGGTGGTTTTGTCTTAA 57.238 29.630 0.00 0.00 0.00 1.85
546 547 9.238368 TGATAATAAGGGTGGTTTTGTCTTAAG 57.762 33.333 0.00 0.00 0.00 1.85
547 548 6.911250 AATAAGGGTGGTTTTGTCTTAAGG 57.089 37.500 1.85 0.00 0.00 2.69
548 549 4.529716 AAGGGTGGTTTTGTCTTAAGGA 57.470 40.909 1.85 0.00 0.00 3.36
549 550 4.529716 AGGGTGGTTTTGTCTTAAGGAA 57.470 40.909 1.85 0.00 0.00 3.36
550 551 4.212716 AGGGTGGTTTTGTCTTAAGGAAC 58.787 43.478 1.85 3.51 0.00 3.62
552 553 5.133153 AGGGTGGTTTTGTCTTAAGGAACTA 59.867 40.000 1.85 0.00 38.49 2.24
553 554 5.829391 GGGTGGTTTTGTCTTAAGGAACTAA 59.171 40.000 1.85 0.00 38.49 2.24
554 555 6.016527 GGGTGGTTTTGTCTTAAGGAACTAAG 60.017 42.308 1.85 0.00 38.49 2.18
555 556 6.436261 GTGGTTTTGTCTTAAGGAACTAAGC 58.564 40.000 1.85 0.47 38.49 3.09
556 557 5.237779 TGGTTTTGTCTTAAGGAACTAAGCG 59.762 40.000 1.85 0.00 38.49 4.68
557 558 5.467735 GGTTTTGTCTTAAGGAACTAAGCGA 59.532 40.000 1.85 0.00 38.49 4.93
558 559 6.017687 GGTTTTGTCTTAAGGAACTAAGCGAA 60.018 38.462 1.85 0.00 38.49 4.70
559 560 6.780706 TTTGTCTTAAGGAACTAAGCGAAG 57.219 37.500 1.85 0.00 38.49 3.79
560 561 4.817517 TGTCTTAAGGAACTAAGCGAAGG 58.182 43.478 1.85 0.00 38.49 3.46
561 562 4.282703 TGTCTTAAGGAACTAAGCGAAGGT 59.717 41.667 1.85 0.00 38.49 3.50
562 563 5.477984 TGTCTTAAGGAACTAAGCGAAGGTA 59.522 40.000 1.85 0.00 38.49 3.08
563 564 6.035217 GTCTTAAGGAACTAAGCGAAGGTAG 58.965 44.000 1.85 0.00 38.49 3.18
564 565 5.948162 TCTTAAGGAACTAAGCGAAGGTAGA 59.052 40.000 1.85 0.00 38.49 2.59
565 566 6.435277 TCTTAAGGAACTAAGCGAAGGTAGAA 59.565 38.462 1.85 0.00 38.49 2.10
566 567 5.479124 AAGGAACTAAGCGAAGGTAGAAA 57.521 39.130 0.00 0.00 38.49 2.52
567 568 4.818642 AGGAACTAAGCGAAGGTAGAAAC 58.181 43.478 0.00 0.00 37.06 2.78
568 569 3.611549 GGAACTAAGCGAAGGTAGAAACG 59.388 47.826 0.00 0.00 37.06 3.60
569 570 3.930634 ACTAAGCGAAGGTAGAAACGT 57.069 42.857 0.00 0.00 37.06 3.99
570 571 5.376854 AACTAAGCGAAGGTAGAAACGTA 57.623 39.130 0.00 0.00 37.06 3.57
571 572 5.376854 ACTAAGCGAAGGTAGAAACGTAA 57.623 39.130 0.00 0.00 37.06 3.18
572 573 5.772521 ACTAAGCGAAGGTAGAAACGTAAA 58.227 37.500 0.00 0.00 37.06 2.01
573 574 6.393171 ACTAAGCGAAGGTAGAAACGTAAAT 58.607 36.000 0.00 0.00 37.06 1.40
574 575 7.538575 ACTAAGCGAAGGTAGAAACGTAAATA 58.461 34.615 0.00 0.00 37.06 1.40
575 576 8.028938 ACTAAGCGAAGGTAGAAACGTAAATAA 58.971 33.333 0.00 0.00 37.06 1.40
576 577 7.656707 AAGCGAAGGTAGAAACGTAAATAAA 57.343 32.000 0.00 0.00 37.06 1.40
577 578 7.656707 AGCGAAGGTAGAAACGTAAATAAAA 57.343 32.000 0.00 0.00 35.08 1.52
578 579 7.513132 AGCGAAGGTAGAAACGTAAATAAAAC 58.487 34.615 0.00 0.00 35.08 2.43
579 580 7.171337 AGCGAAGGTAGAAACGTAAATAAAACA 59.829 33.333 0.00 0.00 35.08 2.83
580 581 7.959109 GCGAAGGTAGAAACGTAAATAAAACAT 59.041 33.333 0.00 0.00 0.00 2.71
581 582 9.469239 CGAAGGTAGAAACGTAAATAAAACATC 57.531 33.333 0.00 0.00 0.00 3.06
582 583 9.469239 GAAGGTAGAAACGTAAATAAAACATCG 57.531 33.333 0.00 0.00 0.00 3.84
583 584 8.761575 AGGTAGAAACGTAAATAAAACATCGA 57.238 30.769 0.00 0.00 0.00 3.59
584 585 9.206870 AGGTAGAAACGTAAATAAAACATCGAA 57.793 29.630 0.00 0.00 0.00 3.71
585 586 9.977762 GGTAGAAACGTAAATAAAACATCGAAT 57.022 29.630 0.00 0.00 0.00 3.34
638 640 3.521560 GTTCATACGATCAAGCTGACCA 58.478 45.455 0.00 0.00 0.00 4.02
653 655 3.315191 GCTGACCACAAATGTTGTACTGT 59.685 43.478 0.00 0.00 43.23 3.55
720 735 1.202076 GCGTGGCTAGCTTTGAATCAC 60.202 52.381 15.72 10.98 0.00 3.06
749 767 1.004044 AGATCTGTTTGGGTCAGCAGG 59.996 52.381 0.00 0.00 33.48 4.85
751 769 1.067295 TCTGTTTGGGTCAGCAGGAT 58.933 50.000 0.00 0.00 33.48 3.24
753 771 2.158475 TCTGTTTGGGTCAGCAGGATTT 60.158 45.455 0.00 0.00 33.48 2.17
792 810 6.377146 TGAATATAGCTAGTGCGATGGACATA 59.623 38.462 0.00 0.00 45.42 2.29
793 811 2.802787 AGCTAGTGCGATGGACATAC 57.197 50.000 0.00 0.00 45.42 2.39
832 851 4.151258 TGTCCAAGTCGTAAAGTAGACG 57.849 45.455 0.00 0.00 41.86 4.18
842 935 4.275689 TCGTAAAGTAGACGGTTCAACTGA 59.724 41.667 2.46 0.00 40.70 3.41
864 964 7.507616 ACTGAAGAATTAACCCACCAAACATTA 59.492 33.333 0.00 0.00 0.00 1.90
875 1053 4.142182 CCACCAAACATTATGCCTTGTAGG 60.142 45.833 0.00 0.00 38.80 3.18
876 1054 4.023291 ACCAAACATTATGCCTTGTAGGG 58.977 43.478 0.00 0.00 35.37 3.53
877 1055 4.023291 CCAAACATTATGCCTTGTAGGGT 58.977 43.478 0.00 0.00 35.37 4.34
878 1056 5.197451 CCAAACATTATGCCTTGTAGGGTA 58.803 41.667 0.00 0.00 35.37 3.69
879 1057 5.299279 CCAAACATTATGCCTTGTAGGGTAG 59.701 44.000 0.00 0.00 35.37 3.18
880 1058 5.710409 AACATTATGCCTTGTAGGGTAGT 57.290 39.130 0.00 0.00 35.37 2.73
881 1059 6.818281 AACATTATGCCTTGTAGGGTAGTA 57.182 37.500 0.00 0.00 35.37 1.82
882 1060 6.170846 ACATTATGCCTTGTAGGGTAGTAC 57.829 41.667 0.00 0.00 35.37 2.73
894 1072 8.567285 TTGTAGGGTAGTACAGTAAGTTCTAC 57.433 38.462 2.06 0.00 45.27 2.59
937 1119 4.194640 TCGTGTATATATACCTCCGGAGC 58.805 47.826 26.87 9.42 32.33 4.70
939 1121 4.534797 GTGTATATATACCTCCGGAGCCT 58.465 47.826 26.87 15.07 32.33 4.58
959 1141 3.004734 CCTTACAACTGAGGCACCAAAAG 59.995 47.826 0.00 0.00 0.00 2.27
962 1144 1.002468 CAACTGAGGCACCAAAAGACG 60.002 52.381 0.00 0.00 0.00 4.18
967 1149 2.556287 GCACCAAAAGACGAGCCG 59.444 61.111 0.00 0.00 0.00 5.52
989 1171 2.094700 TCTACTACGTGCAAAGCTGAGG 60.095 50.000 0.00 0.00 0.00 3.86
2362 2707 1.527370 CCCCTTGGATTCGTCCCTC 59.473 63.158 0.00 0.00 0.00 4.30
2363 2708 1.144057 CCCTTGGATTCGTCCCTCG 59.856 63.158 0.00 0.00 41.41 4.63
2365 2710 1.521681 CTTGGATTCGTCCCTCGCC 60.522 63.158 0.00 0.00 39.67 5.54
2366 2711 2.925162 CTTGGATTCGTCCCTCGCCC 62.925 65.000 0.00 0.00 39.67 6.13
2367 2712 4.587189 GGATTCGTCCCTCGCCCG 62.587 72.222 0.00 0.00 39.67 6.13
2368 2713 4.587189 GATTCGTCCCTCGCCCGG 62.587 72.222 0.00 0.00 39.67 5.73
2401 2746 2.212983 CGTCGACGACACGGTATGC 61.213 63.158 33.35 0.00 43.02 3.14
2411 2756 2.361119 GACACGGTATGCTCATACTCCA 59.639 50.000 16.73 0.00 42.42 3.86
2412 2757 2.965831 ACACGGTATGCTCATACTCCAT 59.034 45.455 16.73 2.28 42.42 3.41
2435 2780 5.947228 TCCATTGATTTCATTAGATCCGC 57.053 39.130 0.00 0.00 0.00 5.54
2454 2800 0.096976 CCGTGTTCGTGGCATTGATC 59.903 55.000 0.00 0.00 35.01 2.92
2546 2935 1.681486 GAGGAGAAAGCGGAGGGGAG 61.681 65.000 0.00 0.00 0.00 4.30
2589 2978 4.658786 ACCCTGGACGGAGCCCTT 62.659 66.667 0.00 0.00 33.16 3.95
2592 2981 2.501610 CTGGACGGAGCCCTTAGC 59.498 66.667 0.00 0.00 44.25 3.09
2718 3107 1.890894 CGTCAAGACCATCGACCCT 59.109 57.895 0.00 0.00 0.00 4.34
2720 3109 0.895530 GTCAAGACCATCGACCCTGA 59.104 55.000 0.00 0.00 0.00 3.86
2888 3280 7.691877 CCACAGCAAACTATTTTGTTTCAAAAC 59.308 33.333 9.33 0.00 43.62 2.43
2910 3334 2.209838 TGCCGCTATTCTCTCTTTCG 57.790 50.000 0.00 0.00 0.00 3.46
2919 3343 0.974383 TCTCTCTTTCGTGTTCCCCC 59.026 55.000 0.00 0.00 0.00 5.40
2920 3344 0.389948 CTCTCTTTCGTGTTCCCCCG 60.390 60.000 0.00 0.00 0.00 5.73
2932 3356 3.387947 CCCCCGGTAGCGTTCACT 61.388 66.667 13.99 0.00 0.00 3.41
2962 3386 1.742831 TGTTGTTGTTGAGTGAGCCAC 59.257 47.619 0.00 0.00 34.10 5.01
3028 3452 3.164028 GCAAACAAGCCACTCGTTC 57.836 52.632 0.00 0.00 0.00 3.95
3029 3453 0.380378 GCAAACAAGCCACTCGTTCA 59.620 50.000 0.00 0.00 0.00 3.18
3030 3454 1.001378 GCAAACAAGCCACTCGTTCAT 60.001 47.619 0.00 0.00 0.00 2.57
3031 3455 2.918131 GCAAACAAGCCACTCGTTCATC 60.918 50.000 0.00 0.00 0.00 2.92
3032 3456 2.549754 CAAACAAGCCACTCGTTCATCT 59.450 45.455 0.00 0.00 0.00 2.90
3033 3457 2.550830 ACAAGCCACTCGTTCATCTT 57.449 45.000 0.00 0.00 0.00 2.40
3034 3458 2.851195 ACAAGCCACTCGTTCATCTTT 58.149 42.857 0.00 0.00 0.00 2.52
3065 3491 6.295249 TGACAGTGGTGAATTTATTGACTCA 58.705 36.000 0.00 0.00 0.00 3.41
3076 3502 8.551205 TGAATTTATTGACTCATAATGTCGCTC 58.449 33.333 0.00 0.00 37.26 5.03
3077 3503 6.510746 TTTATTGACTCATAATGTCGCTCG 57.489 37.500 0.00 0.00 37.26 5.03
3078 3504 1.840181 TGACTCATAATGTCGCTCGC 58.160 50.000 0.00 0.00 37.26 5.03
3079 3505 1.405463 TGACTCATAATGTCGCTCGCT 59.595 47.619 0.00 0.00 37.26 4.93
3082 3508 1.449789 CTCATAATGTCGCTCGCTTCG 59.550 52.381 0.00 0.00 0.00 3.79
3108 3534 7.504403 AGAGAATACAAGCACTATAAGCACAT 58.496 34.615 0.00 0.00 0.00 3.21
3132 3558 1.166531 AGCCTTTGCACGACTGGAAC 61.167 55.000 0.00 0.00 41.13 3.62
3133 3559 1.444119 GCCTTTGCACGACTGGAACA 61.444 55.000 0.00 0.00 37.47 3.18
3140 3566 0.930310 CACGACTGGAACACACACAG 59.070 55.000 0.00 0.00 38.19 3.66
3154 3580 4.471908 ACAGCCCATCATCGCGCA 62.472 61.111 8.75 0.00 0.00 6.09
3161 3591 1.708193 CCATCATCGCGCACACACAT 61.708 55.000 8.75 0.00 0.00 3.21
3167 3597 2.570442 TCGCGCACACACATAGATAA 57.430 45.000 8.75 0.00 0.00 1.75
3170 3600 3.868661 TCGCGCACACACATAGATAAAAT 59.131 39.130 8.75 0.00 0.00 1.82
3171 3601 4.331443 TCGCGCACACACATAGATAAAATT 59.669 37.500 8.75 0.00 0.00 1.82
3173 3603 5.169561 CGCGCACACACATAGATAAAATTTC 59.830 40.000 8.75 0.00 0.00 2.17
3175 3605 5.676744 CGCACACACATAGATAAAATTTCGG 59.323 40.000 0.00 0.00 0.00 4.30
3183 3613 8.552034 CACATAGATAAAATTTCGGAACCTCTC 58.448 37.037 0.00 0.00 0.00 3.20
3184 3614 8.487028 ACATAGATAAAATTTCGGAACCTCTCT 58.513 33.333 0.00 0.00 0.00 3.10
3199 3657 4.655963 ACCTCTCTGCATACAACAACAAT 58.344 39.130 0.00 0.00 0.00 2.71
3209 3667 7.153315 TGCATACAACAACAATCATCAACATT 58.847 30.769 0.00 0.00 0.00 2.71
3220 3678 6.664816 ACAATCATCAACATTAACCATCACCT 59.335 34.615 0.00 0.00 0.00 4.00
3221 3679 7.833682 ACAATCATCAACATTAACCATCACCTA 59.166 33.333 0.00 0.00 0.00 3.08
3253 3711 4.519213 CCGGAATGTGGGATAAGTGTTTA 58.481 43.478 0.00 0.00 0.00 2.01
3275 3733 2.270352 AAACGATGCCTCCAACAAGA 57.730 45.000 0.00 0.00 0.00 3.02
3284 3742 2.408050 CCTCCAACAAGAGAACGACAG 58.592 52.381 0.00 0.00 35.82 3.51
3288 3746 2.797156 CCAACAAGAGAACGACAGACAG 59.203 50.000 0.00 0.00 0.00 3.51
3290 3748 2.032620 ACAAGAGAACGACAGACAGGT 58.967 47.619 0.00 0.00 0.00 4.00
3315 3773 2.826128 GTCATCGCTAGATCCACCCATA 59.174 50.000 0.00 0.00 34.23 2.74
3324 3782 3.863086 AGATCCACCCATAGAGGTTAGG 58.137 50.000 0.00 0.00 38.39 2.69
3330 3788 2.772515 ACCCATAGAGGTTAGGTCTTGC 59.227 50.000 0.00 0.00 36.44 4.01
3337 3795 3.135994 GAGGTTAGGTCTTGCGTTTTCA 58.864 45.455 0.00 0.00 0.00 2.69
3385 3843 9.832445 TGTTAAGGTGGAAAGATCTATATGTTC 57.168 33.333 0.00 0.00 0.00 3.18
3418 3876 6.550843 TGTATCATGTACAAATTTTGCCGAG 58.449 36.000 9.04 0.00 0.00 4.63
3424 3882 6.751514 TGTACAAATTTTGCCGAGACATAT 57.248 33.333 9.04 0.00 0.00 1.78
3434 3892 5.290493 TGCCGAGACATATGGATAAAACT 57.710 39.130 7.80 0.00 0.00 2.66
3478 3936 5.104776 AGTGCTACAACATGTATGGATGTCT 60.105 40.000 0.00 0.00 35.43 3.41
3481 3939 5.237344 GCTACAACATGTATGGATGTCTTCC 59.763 44.000 0.00 0.00 45.69 3.46
3497 3955 9.520515 GGATGTCTTCCCAAAATATGTATATGT 57.479 33.333 0.00 0.00 38.75 2.29
3515 3973 9.206870 TGTATATGTGATATGTGCTATGTGTTG 57.793 33.333 0.00 0.00 0.00 3.33
3521 3979 5.925969 TGATATGTGCTATGTGTTGGTATCG 59.074 40.000 0.00 0.00 0.00 2.92
3531 3989 7.041372 GCTATGTGTTGGTATCGGATAACAAAT 60.041 37.037 25.57 18.77 43.45 2.32
3569 4027 6.954684 GGATGATAGATAGACTAGGGTTTCCA 59.045 42.308 0.00 0.00 34.35 3.53
3579 4037 0.038310 AGGGTTTCCAAGTGGCTAGC 59.962 55.000 6.04 6.04 34.83 3.42
3586 4044 1.277842 TCCAAGTGGCTAGCGATTTCA 59.722 47.619 9.00 0.00 34.44 2.69
3650 4108 2.601367 GCTTTGGGGCTTGCCTCA 60.601 61.111 10.57 10.57 0.00 3.86
3731 4190 4.735132 GCAGCGTGCCCGACAGTA 62.735 66.667 0.00 0.00 37.42 2.74
3735 4194 2.959372 CGTGCCCGACAGTACTCA 59.041 61.111 0.00 0.00 35.63 3.41
3749 4208 0.037326 TACTCACGCAAGAAGGCCAG 60.037 55.000 5.01 0.00 43.62 4.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
60 61 4.783763 ACCCCTTTACAACCTTTCCAAAAA 59.216 37.500 0.00 0.00 0.00 1.94
61 62 4.363573 ACCCCTTTACAACCTTTCCAAAA 58.636 39.130 0.00 0.00 0.00 2.44
62 63 3.962063 GACCCCTTTACAACCTTTCCAAA 59.038 43.478 0.00 0.00 0.00 3.28
63 64 3.205733 AGACCCCTTTACAACCTTTCCAA 59.794 43.478 0.00 0.00 0.00 3.53
64 65 2.787035 AGACCCCTTTACAACCTTTCCA 59.213 45.455 0.00 0.00 0.00 3.53
65 66 3.520691 AGACCCCTTTACAACCTTTCC 57.479 47.619 0.00 0.00 0.00 3.13
66 67 4.466827 TCAAGACCCCTTTACAACCTTTC 58.533 43.478 0.00 0.00 0.00 2.62
67 68 4.529716 TCAAGACCCCTTTACAACCTTT 57.470 40.909 0.00 0.00 0.00 3.11
68 69 4.663334 GATCAAGACCCCTTTACAACCTT 58.337 43.478 0.00 0.00 0.00 3.50
69 70 3.307480 CGATCAAGACCCCTTTACAACCT 60.307 47.826 0.00 0.00 0.00 3.50
70 71 3.007635 CGATCAAGACCCCTTTACAACC 58.992 50.000 0.00 0.00 0.00 3.77
71 72 3.671716 ACGATCAAGACCCCTTTACAAC 58.328 45.455 0.00 0.00 0.00 3.32
72 73 4.069304 CAACGATCAAGACCCCTTTACAA 58.931 43.478 0.00 0.00 0.00 2.41
73 74 3.558321 CCAACGATCAAGACCCCTTTACA 60.558 47.826 0.00 0.00 0.00 2.41
74 75 3.007635 CCAACGATCAAGACCCCTTTAC 58.992 50.000 0.00 0.00 0.00 2.01
75 76 2.907696 TCCAACGATCAAGACCCCTTTA 59.092 45.455 0.00 0.00 0.00 1.85
76 77 1.702957 TCCAACGATCAAGACCCCTTT 59.297 47.619 0.00 0.00 0.00 3.11
77 78 1.003233 GTCCAACGATCAAGACCCCTT 59.997 52.381 0.00 0.00 0.00 3.95
78 79 0.613777 GTCCAACGATCAAGACCCCT 59.386 55.000 0.00 0.00 0.00 4.79
79 80 0.323629 TGTCCAACGATCAAGACCCC 59.676 55.000 0.00 0.00 0.00 4.95
80 81 1.676014 CCTGTCCAACGATCAAGACCC 60.676 57.143 0.00 0.00 0.00 4.46
81 82 1.726853 CCTGTCCAACGATCAAGACC 58.273 55.000 0.00 0.00 0.00 3.85
82 83 1.079503 GCCTGTCCAACGATCAAGAC 58.920 55.000 0.00 0.00 0.00 3.01
83 84 0.036388 GGCCTGTCCAACGATCAAGA 60.036 55.000 0.00 0.00 34.01 3.02
84 85 1.026718 GGGCCTGTCCAACGATCAAG 61.027 60.000 0.84 0.00 36.21 3.02
85 86 1.002624 GGGCCTGTCCAACGATCAA 60.003 57.895 0.84 0.00 36.21 2.57
86 87 0.616395 TAGGGCCTGTCCAACGATCA 60.616 55.000 18.53 0.00 36.21 2.92
87 88 0.759346 ATAGGGCCTGTCCAACGATC 59.241 55.000 18.53 0.00 36.21 3.69
88 89 0.759346 GATAGGGCCTGTCCAACGAT 59.241 55.000 18.53 0.00 36.21 3.73
89 90 1.335132 GGATAGGGCCTGTCCAACGA 61.335 60.000 36.41 7.68 40.73 3.85
90 91 1.146263 GGATAGGGCCTGTCCAACG 59.854 63.158 36.41 0.00 40.73 4.10
91 92 1.802553 TAGGATAGGGCCTGTCCAAC 58.197 55.000 40.19 21.01 42.99 3.77
92 93 2.338809 CATAGGATAGGGCCTGTCCAA 58.661 52.381 40.19 13.72 42.99 3.53
93 94 2.030027 CATAGGATAGGGCCTGTCCA 57.970 55.000 40.19 29.05 42.99 4.02
94 95 0.615850 GCATAGGATAGGGCCTGTCC 59.384 60.000 35.10 35.10 41.24 4.02
95 96 1.277557 CAGCATAGGATAGGGCCTGTC 59.722 57.143 21.05 21.05 39.08 3.51
96 97 1.356124 CAGCATAGGATAGGGCCTGT 58.644 55.000 18.53 10.26 39.08 4.00
97 98 1.277557 GACAGCATAGGATAGGGCCTG 59.722 57.143 18.53 0.00 39.08 4.85
98 99 1.650528 GACAGCATAGGATAGGGCCT 58.349 55.000 12.58 12.58 42.15 5.19
99 100 0.247736 CGACAGCATAGGATAGGGCC 59.752 60.000 0.00 0.00 0.00 5.80
100 101 0.969894 ACGACAGCATAGGATAGGGC 59.030 55.000 0.00 0.00 0.00 5.19
101 102 1.964223 ACACGACAGCATAGGATAGGG 59.036 52.381 0.00 0.00 0.00 3.53
102 103 3.821600 ACTACACGACAGCATAGGATAGG 59.178 47.826 0.00 0.00 0.00 2.57
103 104 6.555812 TTACTACACGACAGCATAGGATAG 57.444 41.667 0.00 0.00 0.00 2.08
104 105 7.336176 CCTATTACTACACGACAGCATAGGATA 59.664 40.741 0.00 0.00 34.47 2.59
105 106 6.151312 CCTATTACTACACGACAGCATAGGAT 59.849 42.308 0.00 0.00 34.47 3.24
106 107 5.472478 CCTATTACTACACGACAGCATAGGA 59.528 44.000 0.00 0.00 34.47 2.94
107 108 5.335740 CCCTATTACTACACGACAGCATAGG 60.336 48.000 0.00 2.61 33.39 2.57
108 109 5.335740 CCCCTATTACTACACGACAGCATAG 60.336 48.000 0.00 0.00 0.00 2.23
109 110 4.521639 CCCCTATTACTACACGACAGCATA 59.478 45.833 0.00 0.00 0.00 3.14
110 111 3.321111 CCCCTATTACTACACGACAGCAT 59.679 47.826 0.00 0.00 0.00 3.79
111 112 2.691526 CCCCTATTACTACACGACAGCA 59.308 50.000 0.00 0.00 0.00 4.41
112 113 2.035576 CCCCCTATTACTACACGACAGC 59.964 54.545 0.00 0.00 0.00 4.40
113 114 3.294214 ACCCCCTATTACTACACGACAG 58.706 50.000 0.00 0.00 0.00 3.51
114 115 3.386932 ACCCCCTATTACTACACGACA 57.613 47.619 0.00 0.00 0.00 4.35
115 116 4.321527 GCATACCCCCTATTACTACACGAC 60.322 50.000 0.00 0.00 0.00 4.34
116 117 3.828451 GCATACCCCCTATTACTACACGA 59.172 47.826 0.00 0.00 0.00 4.35
117 118 3.575256 TGCATACCCCCTATTACTACACG 59.425 47.826 0.00 0.00 0.00 4.49
118 119 5.488341 CATGCATACCCCCTATTACTACAC 58.512 45.833 0.00 0.00 0.00 2.90
119 120 4.534500 CCATGCATACCCCCTATTACTACA 59.466 45.833 0.00 0.00 0.00 2.74
120 121 4.534897 ACCATGCATACCCCCTATTACTAC 59.465 45.833 0.00 0.00 0.00 2.73
121 122 4.770193 ACCATGCATACCCCCTATTACTA 58.230 43.478 0.00 0.00 0.00 1.82
122 123 3.609162 ACCATGCATACCCCCTATTACT 58.391 45.455 0.00 0.00 0.00 2.24
123 124 5.710409 ATACCATGCATACCCCCTATTAC 57.290 43.478 0.00 0.00 0.00 1.89
124 125 6.297360 GGAAATACCATGCATACCCCCTATTA 60.297 42.308 0.00 0.00 38.79 0.98
125 126 5.518367 GGAAATACCATGCATACCCCCTATT 60.518 44.000 0.00 0.00 38.79 1.73
126 127 4.017499 GGAAATACCATGCATACCCCCTAT 60.017 45.833 0.00 0.00 38.79 2.57
127 128 3.332485 GGAAATACCATGCATACCCCCTA 59.668 47.826 0.00 0.00 38.79 3.53
128 129 2.110011 GGAAATACCATGCATACCCCCT 59.890 50.000 0.00 0.00 38.79 4.79
129 130 2.110011 AGGAAATACCATGCATACCCCC 59.890 50.000 0.00 0.00 42.04 5.40
130 131 3.525800 AGGAAATACCATGCATACCCC 57.474 47.619 0.00 0.00 42.04 4.95
131 132 6.375455 CAGAATAGGAAATACCATGCATACCC 59.625 42.308 0.00 0.00 42.04 3.69
132 133 6.127897 GCAGAATAGGAAATACCATGCATACC 60.128 42.308 0.00 0.00 42.04 2.73
133 134 6.430925 TGCAGAATAGGAAATACCATGCATAC 59.569 38.462 0.00 0.00 42.04 2.39
134 135 6.430925 GTGCAGAATAGGAAATACCATGCATA 59.569 38.462 0.00 0.00 42.04 3.14
135 136 5.242393 GTGCAGAATAGGAAATACCATGCAT 59.758 40.000 0.00 0.00 42.04 3.96
136 137 4.580167 GTGCAGAATAGGAAATACCATGCA 59.420 41.667 0.00 0.00 42.04 3.96
137 138 4.823989 AGTGCAGAATAGGAAATACCATGC 59.176 41.667 0.00 0.00 42.04 4.06
138 139 6.949352 AAGTGCAGAATAGGAAATACCATG 57.051 37.500 0.00 0.00 42.04 3.66
139 140 7.721399 CCTAAAGTGCAGAATAGGAAATACCAT 59.279 37.037 11.47 0.00 42.04 3.55
140 141 7.054124 CCTAAAGTGCAGAATAGGAAATACCA 58.946 38.462 11.47 0.00 42.04 3.25
141 142 6.017026 GCCTAAAGTGCAGAATAGGAAATACC 60.017 42.308 18.29 0.00 37.67 2.73
142 143 6.292919 CGCCTAAAGTGCAGAATAGGAAATAC 60.293 42.308 18.29 4.02 37.67 1.89
143 144 5.758296 CGCCTAAAGTGCAGAATAGGAAATA 59.242 40.000 18.29 0.00 37.67 1.40
144 145 4.576463 CGCCTAAAGTGCAGAATAGGAAAT 59.424 41.667 18.29 0.00 37.67 2.17
145 146 3.938963 CGCCTAAAGTGCAGAATAGGAAA 59.061 43.478 18.29 0.00 37.67 3.13
146 147 3.531538 CGCCTAAAGTGCAGAATAGGAA 58.468 45.455 18.29 0.00 37.67 3.36
147 148 3.179443 CGCCTAAAGTGCAGAATAGGA 57.821 47.619 18.29 0.00 37.67 2.94
157 158 0.719465 CTGTAACGGCGCCTAAAGTG 59.281 55.000 26.68 10.34 0.00 3.16
158 159 0.319405 ACTGTAACGGCGCCTAAAGT 59.681 50.000 26.68 18.28 0.00 2.66
159 160 2.282701 TACTGTAACGGCGCCTAAAG 57.717 50.000 26.68 17.59 0.00 1.85
160 161 2.965572 ATACTGTAACGGCGCCTAAA 57.034 45.000 26.68 4.99 0.00 1.85
161 162 4.111916 GTTTATACTGTAACGGCGCCTAA 58.888 43.478 26.68 9.93 0.00 2.69
162 163 3.381272 AGTTTATACTGTAACGGCGCCTA 59.619 43.478 26.68 8.31 31.99 3.93
163 164 2.167075 AGTTTATACTGTAACGGCGCCT 59.833 45.455 26.68 9.55 31.99 5.52
164 165 2.543641 AGTTTATACTGTAACGGCGCC 58.456 47.619 19.07 19.07 31.99 6.53
165 166 4.104776 TGTAGTTTATACTGTAACGGCGC 58.895 43.478 6.90 0.00 35.78 6.53
166 167 6.460987 GTTTGTAGTTTATACTGTAACGGCG 58.539 40.000 4.80 4.80 35.78 6.46
167 168 6.454186 CCGTTTGTAGTTTATACTGTAACGGC 60.454 42.308 22.27 0.00 45.53 5.68
168 169 6.981708 CCGTTTGTAGTTTATACTGTAACGG 58.018 40.000 21.49 21.49 45.76 4.44
169 170 6.454186 GCCCGTTTGTAGTTTATACTGTAACG 60.454 42.308 15.52 15.52 40.02 3.18
170 171 6.454186 CGCCCGTTTGTAGTTTATACTGTAAC 60.454 42.308 0.00 0.00 35.78 2.50
171 172 5.576384 CGCCCGTTTGTAGTTTATACTGTAA 59.424 40.000 0.00 0.00 35.78 2.41
172 173 5.101628 CGCCCGTTTGTAGTTTATACTGTA 58.898 41.667 0.00 0.00 35.78 2.74
173 174 3.928375 CGCCCGTTTGTAGTTTATACTGT 59.072 43.478 0.00 0.00 35.78 3.55
174 175 3.242188 GCGCCCGTTTGTAGTTTATACTG 60.242 47.826 0.00 0.00 35.78 2.74
175 176 2.931969 GCGCCCGTTTGTAGTTTATACT 59.068 45.455 0.00 0.00 38.44 2.12
176 177 2.672381 TGCGCCCGTTTGTAGTTTATAC 59.328 45.455 4.18 0.00 0.00 1.47
177 178 2.672381 GTGCGCCCGTTTGTAGTTTATA 59.328 45.455 4.18 0.00 0.00 0.98
178 179 1.465777 GTGCGCCCGTTTGTAGTTTAT 59.534 47.619 4.18 0.00 0.00 1.40
179 180 0.867086 GTGCGCCCGTTTGTAGTTTA 59.133 50.000 4.18 0.00 0.00 2.01
180 181 1.096386 TGTGCGCCCGTTTGTAGTTT 61.096 50.000 4.18 0.00 0.00 2.66
181 182 1.524165 TGTGCGCCCGTTTGTAGTT 60.524 52.632 4.18 0.00 0.00 2.24
182 183 2.109387 TGTGCGCCCGTTTGTAGT 59.891 55.556 4.18 0.00 0.00 2.73
183 184 2.554272 GTGTGCGCCCGTTTGTAG 59.446 61.111 4.18 0.00 0.00 2.74
184 185 3.339464 CGTGTGCGCCCGTTTGTA 61.339 61.111 4.18 0.00 0.00 2.41
196 197 1.225376 TAAAGTGAAGCGGGCGTGTG 61.225 55.000 0.00 0.00 0.00 3.82
197 198 0.949105 CTAAAGTGAAGCGGGCGTGT 60.949 55.000 0.00 0.00 0.00 4.49
198 199 1.635663 CCTAAAGTGAAGCGGGCGTG 61.636 60.000 0.00 0.00 0.00 5.34
199 200 1.375523 CCTAAAGTGAAGCGGGCGT 60.376 57.895 0.00 0.00 0.00 5.68
200 201 2.750888 GCCTAAAGTGAAGCGGGCG 61.751 63.158 0.00 0.00 0.00 6.13
201 202 1.032114 ATGCCTAAAGTGAAGCGGGC 61.032 55.000 0.00 0.00 39.93 6.13
202 203 1.463674 AATGCCTAAAGTGAAGCGGG 58.536 50.000 0.00 0.00 0.00 6.13
203 204 3.575965 AAAATGCCTAAAGTGAAGCGG 57.424 42.857 0.00 0.00 0.00 5.52
204 205 8.682128 TTTTATAAAATGCCTAAAGTGAAGCG 57.318 30.769 6.54 0.00 0.00 4.68
289 290 9.504708 TCACATTTATCAAAAAGATGCCATTTT 57.495 25.926 0.00 0.00 37.57 1.82
290 291 9.675464 ATCACATTTATCAAAAAGATGCCATTT 57.325 25.926 0.00 0.00 37.57 2.32
292 293 9.976511 CTATCACATTTATCAAAAAGATGCCAT 57.023 29.630 0.00 0.00 37.57 4.40
293 294 7.922278 GCTATCACATTTATCAAAAAGATGCCA 59.078 33.333 0.00 0.00 37.57 4.92
294 295 8.139989 AGCTATCACATTTATCAAAAAGATGCC 58.860 33.333 0.00 0.00 37.57 4.40
295 296 9.525409 AAGCTATCACATTTATCAAAAAGATGC 57.475 29.630 0.00 0.00 37.57 3.91
304 305 9.806203 CCATTTCAAAAGCTATCACATTTATCA 57.194 29.630 0.00 0.00 0.00 2.15
305 306 9.807649 ACCATTTCAAAAGCTATCACATTTATC 57.192 29.630 0.00 0.00 0.00 1.75
308 309 8.584157 TGTACCATTTCAAAAGCTATCACATTT 58.416 29.630 0.00 0.00 0.00 2.32
309 310 8.121305 TGTACCATTTCAAAAGCTATCACATT 57.879 30.769 0.00 0.00 0.00 2.71
310 311 7.701539 TGTACCATTTCAAAAGCTATCACAT 57.298 32.000 0.00 0.00 0.00 3.21
311 312 7.701539 ATGTACCATTTCAAAAGCTATCACA 57.298 32.000 0.00 0.00 0.00 3.58
312 313 8.129211 GGTATGTACCATTTCAAAAGCTATCAC 58.871 37.037 4.34 0.00 45.73 3.06
313 314 7.011950 CGGTATGTACCATTTCAAAAGCTATCA 59.988 37.037 9.69 0.00 46.80 2.15
314 315 7.012044 ACGGTATGTACCATTTCAAAAGCTATC 59.988 37.037 9.69 0.00 46.80 2.08
315 316 6.826741 ACGGTATGTACCATTTCAAAAGCTAT 59.173 34.615 9.69 0.00 46.80 2.97
316 317 6.174760 ACGGTATGTACCATTTCAAAAGCTA 58.825 36.000 9.69 0.00 46.80 3.32
317 318 5.007682 ACGGTATGTACCATTTCAAAAGCT 58.992 37.500 9.69 0.00 46.80 3.74
318 319 5.305139 ACGGTATGTACCATTTCAAAAGC 57.695 39.130 9.69 0.00 46.80 3.51
319 320 6.904498 TCAACGGTATGTACCATTTCAAAAG 58.096 36.000 9.69 0.00 46.80 2.27
320 321 6.879276 TCAACGGTATGTACCATTTCAAAA 57.121 33.333 9.69 0.00 46.80 2.44
321 322 6.655425 TCATCAACGGTATGTACCATTTCAAA 59.345 34.615 9.69 0.00 46.80 2.69
322 323 6.174049 TCATCAACGGTATGTACCATTTCAA 58.826 36.000 9.69 0.00 46.80 2.69
323 324 5.735766 TCATCAACGGTATGTACCATTTCA 58.264 37.500 9.69 0.00 46.80 2.69
324 325 6.706270 AGATCATCAACGGTATGTACCATTTC 59.294 38.462 9.69 0.00 46.80 2.17
325 326 6.483307 CAGATCATCAACGGTATGTACCATTT 59.517 38.462 9.69 0.00 46.80 2.32
326 327 5.991606 CAGATCATCAACGGTATGTACCATT 59.008 40.000 9.69 0.00 46.80 3.16
327 328 5.541845 CAGATCATCAACGGTATGTACCAT 58.458 41.667 9.69 0.00 46.80 3.55
328 329 4.739436 GCAGATCATCAACGGTATGTACCA 60.739 45.833 9.69 0.00 46.80 3.25
329 330 3.741344 GCAGATCATCAACGGTATGTACC 59.259 47.826 0.00 0.00 42.98 3.34
330 331 4.368315 TGCAGATCATCAACGGTATGTAC 58.632 43.478 0.00 0.00 0.00 2.90
331 332 4.664150 TGCAGATCATCAACGGTATGTA 57.336 40.909 0.00 0.00 0.00 2.29
332 333 3.541996 TGCAGATCATCAACGGTATGT 57.458 42.857 0.00 0.00 0.00 2.29
333 334 3.249320 CCTTGCAGATCATCAACGGTATG 59.751 47.826 0.00 0.00 0.00 2.39
334 335 3.470709 CCTTGCAGATCATCAACGGTAT 58.529 45.455 0.00 0.00 0.00 2.73
335 336 2.419990 CCCTTGCAGATCATCAACGGTA 60.420 50.000 0.00 0.00 0.00 4.02
336 337 1.679944 CCCTTGCAGATCATCAACGGT 60.680 52.381 0.00 0.00 0.00 4.83
337 338 1.019673 CCCTTGCAGATCATCAACGG 58.980 55.000 0.00 0.00 0.00 4.44
338 339 0.379669 GCCCTTGCAGATCATCAACG 59.620 55.000 0.00 0.00 37.47 4.10
339 340 1.466856 TGCCCTTGCAGATCATCAAC 58.533 50.000 0.00 0.00 44.23 3.18
340 341 3.983229 TGCCCTTGCAGATCATCAA 57.017 47.368 0.00 0.00 44.23 2.57
350 351 1.944032 CAATAGCCATTTGCCCTTGC 58.056 50.000 0.00 0.00 42.71 4.01
351 352 1.944032 GCAATAGCCATTTGCCCTTG 58.056 50.000 4.90 0.00 42.84 3.61
363 364 0.941542 TTACCGCGAATGGCAATAGC 59.058 50.000 8.23 0.00 43.84 2.97
364 365 2.210116 ACTTACCGCGAATGGCAATAG 58.790 47.619 8.23 0.00 43.84 1.73
365 366 2.319136 ACTTACCGCGAATGGCAATA 57.681 45.000 8.23 0.00 43.84 1.90
366 367 2.159014 TCTACTTACCGCGAATGGCAAT 60.159 45.455 8.23 0.00 43.84 3.56
367 368 1.205179 TCTACTTACCGCGAATGGCAA 59.795 47.619 8.23 0.00 43.84 4.52
368 369 0.818938 TCTACTTACCGCGAATGGCA 59.181 50.000 8.23 0.00 43.84 4.92
369 370 1.202382 ACTCTACTTACCGCGAATGGC 60.202 52.381 8.23 0.00 38.69 4.40
370 371 2.865343 ACTCTACTTACCGCGAATGG 57.135 50.000 8.23 0.00 0.00 3.16
371 372 4.856664 ACATACTCTACTTACCGCGAATG 58.143 43.478 8.23 0.00 0.00 2.67
372 373 4.319333 CGACATACTCTACTTACCGCGAAT 60.319 45.833 8.23 0.00 0.00 3.34
373 374 3.001634 CGACATACTCTACTTACCGCGAA 59.998 47.826 8.23 0.00 0.00 4.70
374 375 2.541346 CGACATACTCTACTTACCGCGA 59.459 50.000 8.23 0.00 0.00 5.87
375 376 2.541346 TCGACATACTCTACTTACCGCG 59.459 50.000 0.00 0.00 0.00 6.46
376 377 3.303659 GGTCGACATACTCTACTTACCGC 60.304 52.174 18.91 0.00 0.00 5.68
377 378 3.249559 GGGTCGACATACTCTACTTACCG 59.750 52.174 18.91 0.00 0.00 4.02
378 379 3.567585 GGGGTCGACATACTCTACTTACC 59.432 52.174 18.91 3.99 0.00 2.85
379 380 4.036144 GTGGGGTCGACATACTCTACTTAC 59.964 50.000 18.91 0.00 29.26 2.34
380 381 4.202441 GTGGGGTCGACATACTCTACTTA 58.798 47.826 18.91 0.00 29.26 2.24
381 382 3.022406 GTGGGGTCGACATACTCTACTT 58.978 50.000 18.91 0.00 29.26 2.24
382 383 2.025605 TGTGGGGTCGACATACTCTACT 60.026 50.000 18.91 0.00 32.84 2.57
383 384 2.358267 CTGTGGGGTCGACATACTCTAC 59.642 54.545 18.91 9.27 32.29 2.59
384 385 2.651455 CTGTGGGGTCGACATACTCTA 58.349 52.381 18.91 0.00 0.00 2.43
385 386 1.475403 CTGTGGGGTCGACATACTCT 58.525 55.000 18.91 0.00 0.00 3.24
386 387 0.460311 CCTGTGGGGTCGACATACTC 59.540 60.000 18.91 8.03 0.00 2.59
387 388 0.040646 TCCTGTGGGGTCGACATACT 59.959 55.000 18.91 0.00 36.25 2.12
388 389 0.899720 TTCCTGTGGGGTCGACATAC 59.100 55.000 18.91 12.86 36.25 2.39
389 390 1.191535 CTTCCTGTGGGGTCGACATA 58.808 55.000 18.91 0.00 36.25 2.29
390 391 1.983224 CTTCCTGTGGGGTCGACAT 59.017 57.895 18.91 0.00 36.25 3.06
391 392 2.879233 GCTTCCTGTGGGGTCGACA 61.879 63.158 18.91 0.00 36.25 4.35
392 393 2.047179 GCTTCCTGTGGGGTCGAC 60.047 66.667 7.13 7.13 36.25 4.20
393 394 2.525629 TGCTTCCTGTGGGGTCGA 60.526 61.111 0.00 0.00 36.25 4.20
394 395 2.046892 CTGCTTCCTGTGGGGTCG 60.047 66.667 0.00 0.00 36.25 4.79
395 396 1.302832 CACTGCTTCCTGTGGGGTC 60.303 63.158 0.00 0.00 37.29 4.46
396 397 2.839098 CACTGCTTCCTGTGGGGT 59.161 61.111 0.00 0.00 37.29 4.95
400 401 2.320587 GCGACCACTGCTTCCTGTG 61.321 63.158 0.00 0.00 39.71 3.66
401 402 2.031163 GCGACCACTGCTTCCTGT 59.969 61.111 0.00 0.00 0.00 4.00
402 403 2.031012 TGCGACCACTGCTTCCTG 59.969 61.111 0.00 0.00 0.00 3.86
403 404 2.031163 GTGCGACCACTGCTTCCT 59.969 61.111 0.00 0.00 38.93 3.36
411 412 2.004733 GGTATTTACCAGTGCGACCAC 58.995 52.381 1.79 0.00 45.73 4.16
412 413 2.389962 GGTATTTACCAGTGCGACCA 57.610 50.000 1.79 0.00 45.73 4.02
422 423 1.473677 GTTGCGGGGTTGGTATTTACC 59.526 52.381 0.00 0.00 46.62 2.85
423 424 2.439409 AGTTGCGGGGTTGGTATTTAC 58.561 47.619 0.00 0.00 0.00 2.01
424 425 2.883122 AGTTGCGGGGTTGGTATTTA 57.117 45.000 0.00 0.00 0.00 1.40
425 426 2.224818 TGTAGTTGCGGGGTTGGTATTT 60.225 45.455 0.00 0.00 0.00 1.40
426 427 1.351683 TGTAGTTGCGGGGTTGGTATT 59.648 47.619 0.00 0.00 0.00 1.89
427 428 0.985760 TGTAGTTGCGGGGTTGGTAT 59.014 50.000 0.00 0.00 0.00 2.73
428 429 0.985760 ATGTAGTTGCGGGGTTGGTA 59.014 50.000 0.00 0.00 0.00 3.25
429 430 0.322187 GATGTAGTTGCGGGGTTGGT 60.322 55.000 0.00 0.00 0.00 3.67
430 431 1.366111 CGATGTAGTTGCGGGGTTGG 61.366 60.000 0.00 0.00 0.00 3.77
431 432 0.672401 ACGATGTAGTTGCGGGGTTG 60.672 55.000 0.00 0.00 0.00 3.77
432 433 0.390735 GACGATGTAGTTGCGGGGTT 60.391 55.000 0.00 0.00 0.00 4.11
433 434 1.217244 GACGATGTAGTTGCGGGGT 59.783 57.895 0.00 0.00 0.00 4.95
434 435 1.082117 GTGACGATGTAGTTGCGGGG 61.082 60.000 0.00 0.00 0.00 5.73
435 436 0.389296 TGTGACGATGTAGTTGCGGG 60.389 55.000 0.00 0.00 0.00 6.13
436 437 0.713883 GTGTGACGATGTAGTTGCGG 59.286 55.000 0.00 0.00 0.00 5.69
437 438 1.414378 TGTGTGACGATGTAGTTGCG 58.586 50.000 0.00 0.00 0.00 4.85
438 439 2.474526 GCATGTGTGACGATGTAGTTGC 60.475 50.000 0.00 0.00 0.00 4.17
439 440 2.222574 CGCATGTGTGACGATGTAGTTG 60.223 50.000 0.00 0.00 0.00 3.16
440 441 1.992667 CGCATGTGTGACGATGTAGTT 59.007 47.619 0.00 0.00 0.00 2.24
441 442 1.629013 CGCATGTGTGACGATGTAGT 58.371 50.000 0.00 0.00 0.00 2.73
442 443 0.923403 CCGCATGTGTGACGATGTAG 59.077 55.000 5.38 0.00 0.00 2.74
443 444 1.081556 GCCGCATGTGTGACGATGTA 61.082 55.000 5.38 0.00 0.00 2.29
444 445 2.390599 GCCGCATGTGTGACGATGT 61.391 57.895 5.38 0.00 0.00 3.06
445 446 0.805711 TAGCCGCATGTGTGACGATG 60.806 55.000 5.38 0.00 0.00 3.84
446 447 0.806102 GTAGCCGCATGTGTGACGAT 60.806 55.000 5.38 0.00 0.00 3.73
447 448 1.445410 GTAGCCGCATGTGTGACGA 60.445 57.895 5.38 0.00 0.00 4.20
448 449 2.788176 CGTAGCCGCATGTGTGACG 61.788 63.158 5.38 7.84 0.00 4.35
449 450 1.289109 AACGTAGCCGCATGTGTGAC 61.289 55.000 5.38 0.00 37.70 3.67
450 451 1.005512 AACGTAGCCGCATGTGTGA 60.006 52.632 5.38 0.00 37.70 3.58
451 452 1.288419 TGAACGTAGCCGCATGTGTG 61.288 55.000 5.38 0.00 37.70 3.82
452 453 1.005512 TGAACGTAGCCGCATGTGT 60.006 52.632 5.38 0.00 37.70 3.72
453 454 1.288419 TGTGAACGTAGCCGCATGTG 61.288 55.000 0.00 0.00 37.70 3.21
454 455 1.005512 TGTGAACGTAGCCGCATGT 60.006 52.632 0.00 0.00 37.70 3.21
455 456 1.419922 GTGTGAACGTAGCCGCATG 59.580 57.895 0.00 0.00 37.70 4.06
456 457 1.740296 GGTGTGAACGTAGCCGCAT 60.740 57.895 0.00 0.00 37.70 4.73
457 458 2.356553 GGTGTGAACGTAGCCGCA 60.357 61.111 0.00 0.00 37.70 5.69
458 459 3.116531 GGGTGTGAACGTAGCCGC 61.117 66.667 0.00 0.00 37.70 6.53
459 460 0.881159 TTTGGGTGTGAACGTAGCCG 60.881 55.000 0.00 0.00 37.27 5.52
460 461 1.002142 GTTTTGGGTGTGAACGTAGCC 60.002 52.381 0.00 0.00 35.09 3.93
461 462 1.333435 CGTTTTGGGTGTGAACGTAGC 60.333 52.381 0.00 0.00 40.71 3.58
462 463 2.656192 CGTTTTGGGTGTGAACGTAG 57.344 50.000 0.00 0.00 40.71 3.51
466 467 4.533222 CAGATAACGTTTTGGGTGTGAAC 58.467 43.478 5.91 0.00 0.00 3.18
467 468 3.566322 CCAGATAACGTTTTGGGTGTGAA 59.434 43.478 5.91 0.00 0.00 3.18
468 469 3.142951 CCAGATAACGTTTTGGGTGTGA 58.857 45.455 5.91 0.00 0.00 3.58
469 470 3.142951 TCCAGATAACGTTTTGGGTGTG 58.857 45.455 19.64 6.82 0.00 3.82
470 471 3.495434 TCCAGATAACGTTTTGGGTGT 57.505 42.857 19.64 0.00 0.00 4.16
471 472 4.839668 TTTCCAGATAACGTTTTGGGTG 57.160 40.909 19.64 7.32 0.00 4.61
472 473 6.243148 ACTATTTCCAGATAACGTTTTGGGT 58.757 36.000 19.64 10.61 0.00 4.51
473 474 6.598064 AGACTATTTCCAGATAACGTTTTGGG 59.402 38.462 19.64 11.95 0.00 4.12
474 475 7.611213 AGACTATTTCCAGATAACGTTTTGG 57.389 36.000 5.91 12.60 0.00 3.28
476 477 9.543783 GGATAGACTATTTCCAGATAACGTTTT 57.456 33.333 5.91 0.00 0.00 2.43
477 478 7.866393 CGGATAGACTATTTCCAGATAACGTTT 59.134 37.037 5.91 0.00 0.00 3.60
478 479 7.014038 ACGGATAGACTATTTCCAGATAACGTT 59.986 37.037 5.88 5.88 0.00 3.99
479 480 6.489361 ACGGATAGACTATTTCCAGATAACGT 59.511 38.462 0.00 0.00 0.00 3.99
480 481 6.910995 ACGGATAGACTATTTCCAGATAACG 58.089 40.000 0.00 0.00 0.00 3.18
481 482 7.599245 CCAACGGATAGACTATTTCCAGATAAC 59.401 40.741 0.00 0.00 0.00 1.89
482 483 7.289317 ACCAACGGATAGACTATTTCCAGATAA 59.711 37.037 0.00 0.00 0.00 1.75
483 484 6.781014 ACCAACGGATAGACTATTTCCAGATA 59.219 38.462 0.00 0.00 0.00 1.98
484 485 5.602978 ACCAACGGATAGACTATTTCCAGAT 59.397 40.000 0.00 0.00 0.00 2.90
485 486 4.960469 ACCAACGGATAGACTATTTCCAGA 59.040 41.667 0.00 0.00 0.00 3.86
486 487 5.277857 ACCAACGGATAGACTATTTCCAG 57.722 43.478 0.00 0.00 0.00 3.86
487 488 5.424757 CAACCAACGGATAGACTATTTCCA 58.575 41.667 0.00 0.00 0.00 3.53
488 489 4.272748 GCAACCAACGGATAGACTATTTCC 59.727 45.833 0.00 0.00 0.00 3.13
489 490 5.116882 AGCAACCAACGGATAGACTATTTC 58.883 41.667 0.00 0.00 0.00 2.17
490 491 5.099042 AGCAACCAACGGATAGACTATTT 57.901 39.130 0.00 0.00 0.00 1.40
491 492 4.755266 AGCAACCAACGGATAGACTATT 57.245 40.909 0.00 0.00 0.00 1.73
492 493 5.598769 GTTAGCAACCAACGGATAGACTAT 58.401 41.667 0.00 0.00 0.00 2.12
493 494 5.002464 GTTAGCAACCAACGGATAGACTA 57.998 43.478 0.00 0.00 0.00 2.59
494 495 3.858247 GTTAGCAACCAACGGATAGACT 58.142 45.455 0.00 0.00 0.00 3.24
507 508 7.920682 CACCCTTATTATCATTTGGTTAGCAAC 59.079 37.037 0.00 0.00 0.00 4.17
508 509 7.069331 CCACCCTTATTATCATTTGGTTAGCAA 59.931 37.037 0.00 0.00 0.00 3.91
509 510 6.549364 CCACCCTTATTATCATTTGGTTAGCA 59.451 38.462 0.00 0.00 0.00 3.49
510 511 6.549736 ACCACCCTTATTATCATTTGGTTAGC 59.450 38.462 0.00 0.00 31.99 3.09
511 512 8.533569 AACCACCCTTATTATCATTTGGTTAG 57.466 34.615 0.84 0.00 42.84 2.34
512 513 8.903059 AAACCACCCTTATTATCATTTGGTTA 57.097 30.769 3.23 0.00 43.64 2.85
513 514 7.806680 AAACCACCCTTATTATCATTTGGTT 57.193 32.000 0.00 0.00 45.79 3.67
514 515 7.236640 ACAAAACCACCCTTATTATCATTTGGT 59.763 33.333 0.00 0.00 37.73 3.67
515 516 7.619965 ACAAAACCACCCTTATTATCATTTGG 58.380 34.615 0.00 0.00 0.00 3.28
516 517 8.531146 AGACAAAACCACCCTTATTATCATTTG 58.469 33.333 0.00 0.00 0.00 2.32
517 518 8.664669 AGACAAAACCACCCTTATTATCATTT 57.335 30.769 0.00 0.00 0.00 2.32
518 519 8.664669 AAGACAAAACCACCCTTATTATCATT 57.335 30.769 0.00 0.00 0.00 2.57
519 520 9.762381 TTAAGACAAAACCACCCTTATTATCAT 57.238 29.630 0.00 0.00 0.00 2.45
520 521 9.238368 CTTAAGACAAAACCACCCTTATTATCA 57.762 33.333 0.00 0.00 0.00 2.15
521 522 8.683615 CCTTAAGACAAAACCACCCTTATTATC 58.316 37.037 3.36 0.00 0.00 1.75
522 523 8.395605 TCCTTAAGACAAAACCACCCTTATTAT 58.604 33.333 3.36 0.00 0.00 1.28
523 524 7.757611 TCCTTAAGACAAAACCACCCTTATTA 58.242 34.615 3.36 0.00 0.00 0.98
524 525 6.616577 TCCTTAAGACAAAACCACCCTTATT 58.383 36.000 3.36 0.00 0.00 1.40
525 526 6.208840 TCCTTAAGACAAAACCACCCTTAT 57.791 37.500 3.36 0.00 0.00 1.73
526 527 5.649970 TCCTTAAGACAAAACCACCCTTA 57.350 39.130 3.36 0.00 0.00 2.69
527 528 4.529716 TCCTTAAGACAAAACCACCCTT 57.470 40.909 3.36 0.00 0.00 3.95
528 529 4.079385 AGTTCCTTAAGACAAAACCACCCT 60.079 41.667 3.36 0.00 0.00 4.34
529 530 4.212716 AGTTCCTTAAGACAAAACCACCC 58.787 43.478 3.36 0.00 0.00 4.61
530 531 6.514541 GCTTAGTTCCTTAAGACAAAACCACC 60.515 42.308 3.36 0.00 33.42 4.61
531 532 6.436261 GCTTAGTTCCTTAAGACAAAACCAC 58.564 40.000 3.36 0.00 33.42 4.16
532 533 5.237779 CGCTTAGTTCCTTAAGACAAAACCA 59.762 40.000 3.36 0.00 33.42 3.67
533 534 5.467735 TCGCTTAGTTCCTTAAGACAAAACC 59.532 40.000 3.36 0.00 33.42 3.27
534 535 6.535274 TCGCTTAGTTCCTTAAGACAAAAC 57.465 37.500 3.36 3.34 33.42 2.43
535 536 6.204108 CCTTCGCTTAGTTCCTTAAGACAAAA 59.796 38.462 3.36 0.00 33.42 2.44
536 537 5.699458 CCTTCGCTTAGTTCCTTAAGACAAA 59.301 40.000 3.36 0.00 33.42 2.83
537 538 5.221581 ACCTTCGCTTAGTTCCTTAAGACAA 60.222 40.000 3.36 0.00 33.42 3.18
538 539 4.282703 ACCTTCGCTTAGTTCCTTAAGACA 59.717 41.667 3.36 0.00 33.42 3.41
539 540 4.818642 ACCTTCGCTTAGTTCCTTAAGAC 58.181 43.478 3.36 0.00 33.42 3.01
540 541 5.948162 TCTACCTTCGCTTAGTTCCTTAAGA 59.052 40.000 3.36 0.00 33.42 2.10
541 542 6.205101 TCTACCTTCGCTTAGTTCCTTAAG 57.795 41.667 0.00 0.00 34.48 1.85
542 543 6.594788 TTCTACCTTCGCTTAGTTCCTTAA 57.405 37.500 0.00 0.00 0.00 1.85
543 544 6.393171 GTTTCTACCTTCGCTTAGTTCCTTA 58.607 40.000 0.00 0.00 0.00 2.69
544 545 5.236282 GTTTCTACCTTCGCTTAGTTCCTT 58.764 41.667 0.00 0.00 0.00 3.36
545 546 4.617762 CGTTTCTACCTTCGCTTAGTTCCT 60.618 45.833 0.00 0.00 0.00 3.36
546 547 3.611549 CGTTTCTACCTTCGCTTAGTTCC 59.388 47.826 0.00 0.00 0.00 3.62
547 548 4.233005 ACGTTTCTACCTTCGCTTAGTTC 58.767 43.478 0.00 0.00 0.00 3.01
548 549 4.248691 ACGTTTCTACCTTCGCTTAGTT 57.751 40.909 0.00 0.00 0.00 2.24
549 550 3.930634 ACGTTTCTACCTTCGCTTAGT 57.069 42.857 0.00 0.00 0.00 2.24
550 551 6.882458 ATTTACGTTTCTACCTTCGCTTAG 57.118 37.500 0.00 0.00 0.00 2.18
551 552 8.755696 TTTATTTACGTTTCTACCTTCGCTTA 57.244 30.769 0.00 0.00 0.00 3.09
552 553 7.656707 TTTATTTACGTTTCTACCTTCGCTT 57.343 32.000 0.00 0.00 0.00 4.68
553 554 7.171337 TGTTTTATTTACGTTTCTACCTTCGCT 59.829 33.333 0.00 0.00 0.00 4.93
554 555 7.290118 TGTTTTATTTACGTTTCTACCTTCGC 58.710 34.615 0.00 0.00 0.00 4.70
555 556 9.469239 GATGTTTTATTTACGTTTCTACCTTCG 57.531 33.333 0.00 0.00 0.00 3.79
556 557 9.469239 CGATGTTTTATTTACGTTTCTACCTTC 57.531 33.333 0.00 0.00 0.00 3.46
557 558 9.206870 TCGATGTTTTATTTACGTTTCTACCTT 57.793 29.630 0.00 0.00 0.00 3.50
558 559 8.761575 TCGATGTTTTATTTACGTTTCTACCT 57.238 30.769 0.00 0.00 0.00 3.08
559 560 9.977762 ATTCGATGTTTTATTTACGTTTCTACC 57.022 29.630 0.00 0.00 0.00 3.18
576 577 8.400186 CGTTTACCCCTTATTTTATTCGATGTT 58.600 33.333 0.00 0.00 0.00 2.71
577 578 7.553760 ACGTTTACCCCTTATTTTATTCGATGT 59.446 33.333 0.00 0.00 0.00 3.06
578 579 7.922837 ACGTTTACCCCTTATTTTATTCGATG 58.077 34.615 0.00 0.00 0.00 3.84
579 580 7.769970 TGACGTTTACCCCTTATTTTATTCGAT 59.230 33.333 0.00 0.00 0.00 3.59
580 581 7.102346 TGACGTTTACCCCTTATTTTATTCGA 58.898 34.615 0.00 0.00 0.00 3.71
581 582 7.306205 TGACGTTTACCCCTTATTTTATTCG 57.694 36.000 0.00 0.00 0.00 3.34
582 583 7.191551 GCTGACGTTTACCCCTTATTTTATTC 58.808 38.462 0.00 0.00 0.00 1.75
583 584 6.183360 CGCTGACGTTTACCCCTTATTTTATT 60.183 38.462 0.00 0.00 33.53 1.40
584 585 5.295045 CGCTGACGTTTACCCCTTATTTTAT 59.705 40.000 0.00 0.00 33.53 1.40
585 586 4.630940 CGCTGACGTTTACCCCTTATTTTA 59.369 41.667 0.00 0.00 33.53 1.52
586 587 3.437741 CGCTGACGTTTACCCCTTATTTT 59.562 43.478 0.00 0.00 33.53 1.82
587 588 3.004862 CGCTGACGTTTACCCCTTATTT 58.995 45.455 0.00 0.00 33.53 1.40
588 589 2.624636 CGCTGACGTTTACCCCTTATT 58.375 47.619 0.00 0.00 33.53 1.40
589 590 2.304751 CGCTGACGTTTACCCCTTAT 57.695 50.000 0.00 0.00 33.53 1.73
590 591 3.818586 CGCTGACGTTTACCCCTTA 57.181 52.632 0.00 0.00 33.53 2.69
591 592 4.687464 CGCTGACGTTTACCCCTT 57.313 55.556 0.00 0.00 33.53 3.95
664 666 6.472016 TGCCAAAGTTGACTCAGTATTGATA 58.528 36.000 0.00 0.00 31.68 2.15
720 735 2.089980 CCAAACAGATCTTGGCCTCTG 58.910 52.381 16.15 16.15 43.62 3.35
768 786 5.060662 TGTCCATCGCACTAGCTATATTC 57.939 43.478 0.00 0.00 39.10 1.75
792 810 0.246635 AAGTAATCAGGAGCGCACGT 59.753 50.000 11.47 0.81 0.00 4.49
793 811 0.647410 CAAGTAATCAGGAGCGCACG 59.353 55.000 11.47 0.00 0.00 5.34
832 851 5.278808 GGTGGGTTAATTCTTCAGTTGAACC 60.279 44.000 0.00 0.00 35.23 3.62
842 935 7.102993 GCATAATGTTTGGTGGGTTAATTCTT 58.897 34.615 0.00 0.00 0.00 2.52
864 964 3.721021 ACTGTACTACCCTACAAGGCAT 58.279 45.455 0.00 0.00 32.73 4.40
875 1053 5.186198 TCCGGTAGAACTTACTGTACTACC 58.814 45.833 16.60 16.60 45.30 3.18
876 1054 6.595716 TCTTCCGGTAGAACTTACTGTACTAC 59.404 42.308 8.54 0.00 34.55 2.73
877 1055 6.711277 TCTTCCGGTAGAACTTACTGTACTA 58.289 40.000 8.54 0.00 0.00 1.82
878 1056 5.564550 TCTTCCGGTAGAACTTACTGTACT 58.435 41.667 8.54 0.00 0.00 2.73
879 1057 5.414144 ACTCTTCCGGTAGAACTTACTGTAC 59.586 44.000 12.26 0.00 0.00 2.90
880 1058 5.564550 ACTCTTCCGGTAGAACTTACTGTA 58.435 41.667 12.26 0.00 0.00 2.74
881 1059 4.405548 ACTCTTCCGGTAGAACTTACTGT 58.594 43.478 12.26 1.94 0.00 3.55
882 1060 4.701171 AGACTCTTCCGGTAGAACTTACTG 59.299 45.833 12.26 1.31 0.00 2.74
894 1072 1.269517 GCATAGCAGAGACTCTTCCGG 60.270 57.143 0.98 0.00 0.00 5.14
937 1119 2.270352 TTGGTGCCTCAGTTGTAAGG 57.730 50.000 0.00 0.00 35.65 2.69
939 1121 3.630312 GTCTTTTGGTGCCTCAGTTGTAA 59.370 43.478 0.00 0.00 0.00 2.41
967 1149 2.917971 CTCAGCTTTGCACGTAGTAGAC 59.082 50.000 0.00 0.00 41.61 2.59
989 1171 4.189188 CCGCCATTGCTGCTGCTC 62.189 66.667 17.00 0.61 40.48 4.26
2368 2713 4.699522 ACGAAGGCGGCCCAGAAC 62.700 66.667 17.02 2.01 43.17 3.01
2401 2746 7.812690 TGAAATCAATGGAATGGAGTATGAG 57.187 36.000 0.00 0.00 23.05 2.90
2411 2756 6.071728 GGCGGATCTAATGAAATCAATGGAAT 60.072 38.462 0.00 0.00 0.00 3.01
2412 2757 5.241506 GGCGGATCTAATGAAATCAATGGAA 59.758 40.000 0.00 0.00 0.00 3.53
2435 2780 0.096976 GATCAATGCCACGAACACGG 59.903 55.000 0.00 0.00 0.00 4.94
2454 2800 1.067283 ACAGATGTCCACAAGAGCTCG 60.067 52.381 8.37 0.00 0.00 5.03
2546 2935 4.050934 CGGCGGCCACCTTTTTCC 62.051 66.667 20.71 0.00 0.00 3.13
2566 2955 1.617947 GCTCCGTCCAGGGTCTTCAT 61.618 60.000 0.00 0.00 41.52 2.57
2718 3107 2.755876 AGGAGCGGCATCGTCTCA 60.756 61.111 1.45 0.00 39.49 3.27
2720 3109 3.842923 CCAGGAGCGGCATCGTCT 61.843 66.667 1.45 0.00 38.89 4.18
2888 3280 3.060003 CGAAAGAGAGAATAGCGGCAATG 60.060 47.826 1.45 0.00 0.00 2.82
2910 3334 3.244281 AACGCTACCGGGGGAACAC 62.244 63.158 6.32 0.00 39.22 3.32
2919 3343 6.128742 ACAAAACTAAATAGTGAACGCTACCG 60.129 38.462 0.00 0.00 36.50 4.02
2920 3344 7.125536 ACAAAACTAAATAGTGAACGCTACC 57.874 36.000 0.00 0.00 36.50 3.18
2932 3356 9.781834 CTCACTCAACAACAACAAAACTAAATA 57.218 29.630 0.00 0.00 0.00 1.40
2994 3418 6.709846 GCTTGTTTGCCTGAAGATAGATAGAT 59.290 38.462 0.00 0.00 0.00 1.98
3050 3474 8.437360 AGCGACATTATGAGTCAATAAATTCA 57.563 30.769 0.00 0.00 35.77 2.57
3051 3475 7.737744 CGAGCGACATTATGAGTCAATAAATTC 59.262 37.037 0.00 0.00 35.77 2.17
3052 3476 7.567571 CGAGCGACATTATGAGTCAATAAATT 58.432 34.615 0.00 0.00 35.77 1.82
3065 3491 1.759994 CTCGAAGCGAGCGACATTAT 58.240 50.000 3.76 0.00 46.75 1.28
3076 3502 2.280183 GTGCTTGTATTCTCTCGAAGCG 59.720 50.000 0.00 0.00 41.59 4.68
3077 3503 3.516615 AGTGCTTGTATTCTCTCGAAGC 58.483 45.455 0.00 0.00 39.59 3.86
3078 3504 7.114247 GCTTATAGTGCTTGTATTCTCTCGAAG 59.886 40.741 0.00 0.00 31.60 3.79
3079 3505 6.918569 GCTTATAGTGCTTGTATTCTCTCGAA 59.081 38.462 0.00 0.00 0.00 3.71
3082 3508 6.980978 TGTGCTTATAGTGCTTGTATTCTCTC 59.019 38.462 2.33 0.00 0.00 3.20
3108 3534 2.110835 TCGTGCAAAGGCTGAGCA 59.889 55.556 6.82 9.74 41.91 4.26
3113 3539 1.148273 TTCCAGTCGTGCAAAGGCT 59.852 52.632 0.00 0.00 41.91 4.58
3132 3558 1.985447 GCGATGATGGGCTGTGTGTG 61.985 60.000 0.00 0.00 0.00 3.82
3133 3559 1.746615 GCGATGATGGGCTGTGTGT 60.747 57.895 0.00 0.00 0.00 3.72
3140 3566 4.241999 GTGTGCGCGATGATGGGC 62.242 66.667 12.10 0.00 46.92 5.36
3154 3580 7.610305 AGGTTCCGAAATTTTATCTATGTGTGT 59.390 33.333 0.00 0.00 0.00 3.72
3161 3591 6.761714 GCAGAGAGGTTCCGAAATTTTATCTA 59.238 38.462 0.00 0.00 0.00 1.98
3167 3597 3.140325 TGCAGAGAGGTTCCGAAATTT 57.860 42.857 0.00 0.00 0.00 1.82
3170 3600 2.565391 TGTATGCAGAGAGGTTCCGAAA 59.435 45.455 0.00 0.00 0.00 3.46
3171 3601 2.176045 TGTATGCAGAGAGGTTCCGAA 58.824 47.619 0.00 0.00 0.00 4.30
3173 3603 2.271800 GTTGTATGCAGAGAGGTTCCG 58.728 52.381 0.00 0.00 0.00 4.30
3175 3605 4.065088 TGTTGTTGTATGCAGAGAGGTTC 58.935 43.478 0.00 0.00 0.00 3.62
3183 3613 6.151004 TGTTGATGATTGTTGTTGTATGCAG 58.849 36.000 0.00 0.00 0.00 4.41
3184 3614 6.081872 TGTTGATGATTGTTGTTGTATGCA 57.918 33.333 0.00 0.00 0.00 3.96
3199 3657 6.705825 CGATAGGTGATGGTTAATGTTGATGA 59.294 38.462 0.00 0.00 0.00 2.92
3209 3667 1.760029 TGCTGCGATAGGTGATGGTTA 59.240 47.619 0.00 0.00 0.00 2.85
3220 3678 1.227527 CATTCCGGGTGCTGCGATA 60.228 57.895 0.00 0.00 0.00 2.92
3221 3679 2.514592 CATTCCGGGTGCTGCGAT 60.515 61.111 0.00 0.00 0.00 4.58
3271 3729 2.223829 ACACCTGTCTGTCGTTCTCTTG 60.224 50.000 0.00 0.00 0.00 3.02
3275 3733 1.480954 ACAACACCTGTCTGTCGTTCT 59.519 47.619 0.00 0.00 29.87 3.01
3288 3746 2.159099 TGGATCTAGCGATGACAACACC 60.159 50.000 0.00 0.00 0.00 4.16
3290 3748 2.159099 GGTGGATCTAGCGATGACAACA 60.159 50.000 0.00 0.00 0.00 3.33
3315 3773 3.181458 TGAAAACGCAAGACCTAACCTCT 60.181 43.478 0.00 0.00 43.62 3.69
3324 3782 1.161563 TCGGGGTGAAAACGCAAGAC 61.162 55.000 0.00 0.00 43.62 3.01
3330 3788 4.752661 TCTTTTAATCGGGGTGAAAACG 57.247 40.909 0.00 0.00 0.00 3.60
3363 3821 7.451731 TGGAACATATAGATCTTTCCACCTT 57.548 36.000 18.02 0.00 40.63 3.50
3381 3839 8.633561 TTGTACATGATACAATTTTGTGGAACA 58.366 29.630 13.46 2.28 42.31 3.18
3413 3871 9.601217 AATATAGTTTTATCCATATGTCTCGGC 57.399 33.333 1.24 0.00 0.00 5.54
3424 3882 9.772973 ATTGCTACGTCAATATAGTTTTATCCA 57.227 29.630 0.00 0.00 35.12 3.41
3497 3955 5.925969 CGATACCAACACATAGCACATATCA 59.074 40.000 0.00 0.00 0.00 2.15
3505 3963 5.294356 TGTTATCCGATACCAACACATAGC 58.706 41.667 0.00 0.00 0.00 2.97
3515 3973 7.078228 GCTTGATTGATTTGTTATCCGATACC 58.922 38.462 0.00 0.00 0.00 2.73
3521 3979 5.516339 CCAACGCTTGATTGATTTGTTATCC 59.484 40.000 0.15 0.00 0.00 2.59
3531 3989 5.022282 TCTATCATCCAACGCTTGATTGA 57.978 39.130 0.00 0.00 32.04 2.57
3569 4027 1.739067 GGTGAAATCGCTAGCCACTT 58.261 50.000 17.09 0.00 0.00 3.16
3692 4151 4.623171 GCTCGTTTCCAGAAATCTTCCCTA 60.623 45.833 0.00 0.00 32.36 3.53
3726 4185 1.605712 GCCTTCTTGCGTGAGTACTGT 60.606 52.381 0.00 0.00 0.00 3.55
3731 4190 1.302033 CTGGCCTTCTTGCGTGAGT 60.302 57.895 3.32 0.00 0.00 3.41
3735 4194 0.890996 CTTTCCTGGCCTTCTTGCGT 60.891 55.000 3.32 0.00 0.00 5.24
3749 4208 1.468914 GTCTTCCGCCAACATCTTTCC 59.531 52.381 0.00 0.00 0.00 3.13


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.