Multiple sequence alignment - TraesCS4A01G434200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G434200 chr4A 100.000 3030 0 0 1 3030 704808953 704805924 0.000000e+00 5596
1 TraesCS4A01G434200 chr4A 94.121 2007 83 18 1 1986 705056227 705054235 0.000000e+00 3020
2 TraesCS4A01G434200 chr4A 87.733 1125 86 29 899 1986 705170664 705169555 0.000000e+00 1266
3 TraesCS4A01G434200 chr4A 84.568 162 22 3 2687 2845 705053517 705053356 1.120000e-34 158
4 TraesCS4A01G434200 chr4A 91.743 109 8 1 2506 2613 705169039 705168931 1.880000e-32 150
5 TraesCS4A01G434200 chr7D 89.499 1657 65 45 899 2470 22270428 22268796 0.000000e+00 1995
6 TraesCS4A01G434200 chr7D 87.604 1202 65 23 696 1835 22510210 22509031 0.000000e+00 1317
7 TraesCS4A01G434200 chr7D 86.271 1180 88 31 899 2013 22523175 22522005 0.000000e+00 1214
8 TraesCS4A01G434200 chr7D 94.722 701 33 4 1 699 142621075 142621773 0.000000e+00 1086
9 TraesCS4A01G434200 chr7D 93.537 557 30 3 2475 3030 22268749 22268198 0.000000e+00 824
10 TraesCS4A01G434200 chr7D 88.318 214 17 5 1804 2013 22509021 22508812 1.800000e-62 250
11 TraesCS4A01G434200 chr7D 85.915 71 9 1 2791 2860 22508575 22508505 1.170000e-09 75
12 TraesCS4A01G434200 chr7D 82.609 92 9 7 2511 2597 22508707 22508618 1.170000e-09 75
13 TraesCS4A01G434200 chr7A 88.850 1157 68 26 899 2020 22898542 22897412 0.000000e+00 1365
14 TraesCS4A01G434200 chr7A 87.603 968 54 26 898 1835 22916650 22915719 0.000000e+00 1062
15 TraesCS4A01G434200 chr7A 90.340 559 38 7 2475 3030 22896904 22896359 0.000000e+00 719
16 TraesCS4A01G434200 chr7A 88.318 214 17 5 1804 2013 22915709 22915500 1.800000e-62 250
17 TraesCS4A01G434200 chr7A 85.294 204 27 3 2769 2970 22897190 22896988 1.100000e-49 207
18 TraesCS4A01G434200 chr7A 82.514 183 28 2 2774 2953 22915274 22915093 1.120000e-34 158
19 TraesCS4A01G434200 chr6D 95.000 700 31 4 1 698 427235554 427234857 0.000000e+00 1096
20 TraesCS4A01G434200 chr6D 94.707 699 31 6 1 697 57995824 57995130 0.000000e+00 1081
21 TraesCS4A01G434200 chr5D 94.993 699 33 2 1 697 365119173 365118475 0.000000e+00 1096
22 TraesCS4A01G434200 chr5D 94.444 702 37 2 1 700 304883055 304882354 0.000000e+00 1079
23 TraesCS4A01G434200 chr3D 94.864 701 31 5 1 698 8303437 8302739 0.000000e+00 1090
24 TraesCS4A01G434200 chr2D 94.978 697 31 4 1 694 142522134 142521439 0.000000e+00 1090
25 TraesCS4A01G434200 chr2D 94.587 702 33 5 1 698 588795592 588794892 0.000000e+00 1081
26 TraesCS4A01G434200 chr5B 93.320 494 32 1 1090 1582 469337832 469338325 0.000000e+00 728
27 TraesCS4A01G434200 chr6B 86.874 419 20 13 1746 2142 138522438 138522843 1.290000e-118 436
28 TraesCS4A01G434200 chr6B 90.367 218 21 0 1224 1441 138522219 138522436 1.370000e-73 287
29 TraesCS4A01G434200 chr1A 98.361 61 1 0 1589 1649 27383214 27383154 1.150000e-19 108
30 TraesCS4A01G434200 chr1A 96.721 61 2 0 1589 1649 442726932 442726872 5.340000e-18 102


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G434200 chr4A 704805924 704808953 3029 True 5596.000000 5596 100.000000 1 3030 1 chr4A.!!$R1 3029
1 TraesCS4A01G434200 chr4A 705053356 705056227 2871 True 1589.000000 3020 89.344500 1 2845 2 chr4A.!!$R2 2844
2 TraesCS4A01G434200 chr4A 705168931 705170664 1733 True 708.000000 1266 89.738000 899 2613 2 chr4A.!!$R3 1714
3 TraesCS4A01G434200 chr7D 22268198 22270428 2230 True 1409.500000 1995 91.518000 899 3030 2 chr7D.!!$R2 2131
4 TraesCS4A01G434200 chr7D 22522005 22523175 1170 True 1214.000000 1214 86.271000 899 2013 1 chr7D.!!$R1 1114
5 TraesCS4A01G434200 chr7D 142621075 142621773 698 False 1086.000000 1086 94.722000 1 699 1 chr7D.!!$F1 698
6 TraesCS4A01G434200 chr7D 22508505 22510210 1705 True 429.250000 1317 86.111500 696 2860 4 chr7D.!!$R3 2164
7 TraesCS4A01G434200 chr7A 22896359 22898542 2183 True 763.666667 1365 88.161333 899 3030 3 chr7A.!!$R1 2131
8 TraesCS4A01G434200 chr7A 22915093 22916650 1557 True 490.000000 1062 86.145000 898 2953 3 chr7A.!!$R2 2055
9 TraesCS4A01G434200 chr6D 427234857 427235554 697 True 1096.000000 1096 95.000000 1 698 1 chr6D.!!$R2 697
10 TraesCS4A01G434200 chr6D 57995130 57995824 694 True 1081.000000 1081 94.707000 1 697 1 chr6D.!!$R1 696
11 TraesCS4A01G434200 chr5D 365118475 365119173 698 True 1096.000000 1096 94.993000 1 697 1 chr5D.!!$R2 696
12 TraesCS4A01G434200 chr5D 304882354 304883055 701 True 1079.000000 1079 94.444000 1 700 1 chr5D.!!$R1 699
13 TraesCS4A01G434200 chr3D 8302739 8303437 698 True 1090.000000 1090 94.864000 1 698 1 chr3D.!!$R1 697
14 TraesCS4A01G434200 chr2D 142521439 142522134 695 True 1090.000000 1090 94.978000 1 694 1 chr2D.!!$R1 693
15 TraesCS4A01G434200 chr2D 588794892 588795592 700 True 1081.000000 1081 94.587000 1 698 1 chr2D.!!$R2 697
16 TraesCS4A01G434200 chr6B 138522219 138522843 624 False 361.500000 436 88.620500 1224 2142 2 chr6B.!!$F1 918

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
799 811 0.260523 ACCTGTAGGGAGAGAGAGCC 59.739 60.0 2.53 0.0 40.27 4.7 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2141 2576 0.036765 GACCACACCTCAATACCGCA 60.037 55.0 0.0 0.0 0.0 5.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
301 302 7.141100 TCCGTTTCCTGAAAATCTGTTATTC 57.859 36.000 0.00 0.00 31.33 1.75
317 318 8.080083 TCTGTTATTCGTTTCCTAAGACAAAC 57.920 34.615 0.00 0.00 0.00 2.93
437 439 9.898152 AAGACAAATTGAACCAATAAAAGGAAA 57.102 25.926 0.00 0.00 32.43 3.13
490 493 7.709947 AGATCCGTGATTTGTTATACGTTAGA 58.290 34.615 0.00 0.00 34.96 2.10
539 542 5.429130 GAGAGAAAAATAACCCGATGGACT 58.571 41.667 0.00 0.00 34.81 3.85
658 664 4.571372 AACCAAGAAAAATAAACCGCGA 57.429 36.364 8.23 0.00 0.00 5.87
662 668 5.048294 ACCAAGAAAAATAAACCGCGAAGAT 60.048 36.000 8.23 0.00 0.00 2.40
799 811 0.260523 ACCTGTAGGGAGAGAGAGCC 59.739 60.000 2.53 0.00 40.27 4.70
991 1043 2.314415 TATAAACGCCCTCACCGGCC 62.314 60.000 0.00 0.00 46.98 6.13
1058 1119 0.105593 CCGTCATCCAGATCCACAGG 59.894 60.000 0.00 0.00 0.00 4.00
1064 1125 2.513204 CAGATCCACAGGGCAGCG 60.513 66.667 0.00 0.00 0.00 5.18
1800 1977 2.108566 CAGCGGCCAGGATCTCAG 59.891 66.667 2.24 0.00 0.00 3.35
1802 1979 4.925861 GCGGCCAGGATCTCAGCC 62.926 72.222 2.24 9.53 42.18 4.85
1903 2131 2.673775 TTGCAATCCCTGTTCTTGGA 57.326 45.000 0.00 0.00 34.54 3.53
1912 2157 2.482142 CCCTGTTCTTGGATCTAGCGAC 60.482 54.545 0.00 0.00 0.00 5.19
1922 2167 0.532573 ATCTAGCGACTGTGGTGTGG 59.467 55.000 0.00 0.00 0.00 4.17
1965 2210 2.220824 TGTGTTCGTCGAAATGCTTGAG 59.779 45.455 9.70 0.00 0.00 3.02
2008 2438 4.476113 TCCATGTCTGAATCAAATCCCTCT 59.524 41.667 0.00 0.00 0.00 3.69
2039 2474 4.156556 TGTCATGCCATGTTTCTTTCTAGC 59.843 41.667 4.31 0.00 0.00 3.42
2073 2508 7.797121 AAATCAAATCCCCTGAAAGTATTGT 57.203 32.000 0.00 0.00 0.00 2.71
2074 2509 7.410120 AATCAAATCCCCTGAAAGTATTGTC 57.590 36.000 0.00 0.00 0.00 3.18
2075 2510 6.139679 TCAAATCCCCTGAAAGTATTGTCT 57.860 37.500 0.00 0.00 0.00 3.41
2076 2511 5.945784 TCAAATCCCCTGAAAGTATTGTCTG 59.054 40.000 0.00 0.00 0.00 3.51
2077 2512 5.779241 AATCCCCTGAAAGTATTGTCTGA 57.221 39.130 0.00 0.00 0.00 3.27
2078 2513 5.983333 ATCCCCTGAAAGTATTGTCTGAT 57.017 39.130 0.00 0.00 0.00 2.90
2079 2514 5.359194 TCCCCTGAAAGTATTGTCTGATC 57.641 43.478 0.00 0.00 0.00 2.92
2080 2515 4.782691 TCCCCTGAAAGTATTGTCTGATCA 59.217 41.667 0.00 0.00 0.00 2.92
2081 2516 5.250543 TCCCCTGAAAGTATTGTCTGATCAA 59.749 40.000 0.00 0.00 0.00 2.57
2082 2517 5.355350 CCCCTGAAAGTATTGTCTGATCAAC 59.645 44.000 0.00 0.00 0.00 3.18
2083 2518 6.176183 CCCTGAAAGTATTGTCTGATCAACT 58.824 40.000 0.00 0.00 0.00 3.16
2084 2519 6.314896 CCCTGAAAGTATTGTCTGATCAACTC 59.685 42.308 0.00 0.00 0.00 3.01
2085 2520 7.102346 CCTGAAAGTATTGTCTGATCAACTCT 58.898 38.462 0.00 0.00 0.00 3.24
2086 2521 7.064371 CCTGAAAGTATTGTCTGATCAACTCTG 59.936 40.741 0.00 0.00 0.00 3.35
2087 2522 7.670364 TGAAAGTATTGTCTGATCAACTCTGA 58.330 34.615 0.00 0.00 35.56 3.27
2088 2523 8.150296 TGAAAGTATTGTCTGATCAACTCTGAA 58.850 33.333 0.00 0.00 34.49 3.02
2089 2524 9.160496 GAAAGTATTGTCTGATCAACTCTGAAT 57.840 33.333 0.00 0.00 34.49 2.57
2090 2525 9.512588 AAAGTATTGTCTGATCAACTCTGAATT 57.487 29.630 0.00 0.00 34.49 2.17
2094 2529 8.674263 ATTGTCTGATCAACTCTGAATTATCC 57.326 34.615 0.00 0.00 34.49 2.59
2095 2530 7.429374 TGTCTGATCAACTCTGAATTATCCT 57.571 36.000 0.00 0.00 34.49 3.24
2096 2531 7.270779 TGTCTGATCAACTCTGAATTATCCTG 58.729 38.462 0.00 0.00 34.49 3.86
2097 2532 7.124750 TGTCTGATCAACTCTGAATTATCCTGA 59.875 37.037 0.00 0.00 34.49 3.86
2098 2533 7.984050 GTCTGATCAACTCTGAATTATCCTGAA 59.016 37.037 0.00 0.00 34.49 3.02
2099 2534 8.542926 TCTGATCAACTCTGAATTATCCTGAAA 58.457 33.333 0.00 0.00 34.49 2.69
2100 2535 9.339850 CTGATCAACTCTGAATTATCCTGAAAT 57.660 33.333 0.00 0.00 34.49 2.17
2109 2544 9.950496 TCTGAATTATCCTGAAATAATAGCTCC 57.050 33.333 0.00 0.00 32.72 4.70
2110 2545 9.956640 CTGAATTATCCTGAAATAATAGCTCCT 57.043 33.333 0.00 0.00 32.72 3.69
2111 2546 9.730705 TGAATTATCCTGAAATAATAGCTCCTG 57.269 33.333 0.00 0.00 32.72 3.86
2112 2547 9.732130 GAATTATCCTGAAATAATAGCTCCTGT 57.268 33.333 0.00 0.00 32.72 4.00
2115 2550 9.920946 TTATCCTGAAATAATAGCTCCTGTTTT 57.079 29.630 0.00 0.00 0.00 2.43
2116 2551 8.829373 ATCCTGAAATAATAGCTCCTGTTTTT 57.171 30.769 0.00 0.00 0.00 1.94
2143 2578 9.577110 TTGATATCTGAAAATCTTCACAATTGC 57.423 29.630 5.05 0.00 36.62 3.56
2144 2579 7.911727 TGATATCTGAAAATCTTCACAATTGCG 59.088 33.333 5.05 0.00 36.62 4.85
2145 2580 4.797471 TCTGAAAATCTTCACAATTGCGG 58.203 39.130 5.05 0.00 36.62 5.69
2146 2581 4.278170 TCTGAAAATCTTCACAATTGCGGT 59.722 37.500 5.05 0.00 36.62 5.68
2147 2582 5.471797 TCTGAAAATCTTCACAATTGCGGTA 59.528 36.000 5.05 0.00 36.62 4.02
2148 2583 6.150976 TCTGAAAATCTTCACAATTGCGGTAT 59.849 34.615 5.05 0.00 36.62 2.73
2149 2584 6.686630 TGAAAATCTTCACAATTGCGGTATT 58.313 32.000 5.05 0.00 36.62 1.89
2150 2585 6.585702 TGAAAATCTTCACAATTGCGGTATTG 59.414 34.615 5.05 0.00 36.62 1.90
2151 2586 5.895636 AATCTTCACAATTGCGGTATTGA 57.104 34.783 5.05 0.00 38.56 2.57
2152 2587 4.944962 TCTTCACAATTGCGGTATTGAG 57.055 40.909 5.05 5.44 38.56 3.02
2153 2588 3.689161 TCTTCACAATTGCGGTATTGAGG 59.311 43.478 5.05 1.45 38.56 3.86
2154 2589 3.066291 TCACAATTGCGGTATTGAGGT 57.934 42.857 5.05 0.00 38.56 3.85
2155 2590 2.746904 TCACAATTGCGGTATTGAGGTG 59.253 45.455 5.05 0.00 38.56 4.00
2156 2591 2.487762 CACAATTGCGGTATTGAGGTGT 59.512 45.455 5.05 0.00 38.56 4.16
2157 2592 2.487762 ACAATTGCGGTATTGAGGTGTG 59.512 45.455 5.05 0.00 38.56 3.82
2158 2593 1.750193 ATTGCGGTATTGAGGTGTGG 58.250 50.000 0.00 0.00 0.00 4.17
2159 2594 0.398696 TTGCGGTATTGAGGTGTGGT 59.601 50.000 0.00 0.00 0.00 4.16
2160 2595 0.036765 TGCGGTATTGAGGTGTGGTC 60.037 55.000 0.00 0.00 0.00 4.02
2161 2596 0.249398 GCGGTATTGAGGTGTGGTCT 59.751 55.000 0.00 0.00 0.00 3.85
2162 2597 1.338769 GCGGTATTGAGGTGTGGTCTT 60.339 52.381 0.00 0.00 0.00 3.01
2163 2598 2.346803 CGGTATTGAGGTGTGGTCTTG 58.653 52.381 0.00 0.00 0.00 3.02
2164 2599 2.711542 GGTATTGAGGTGTGGTCTTGG 58.288 52.381 0.00 0.00 0.00 3.61
2165 2600 2.304761 GGTATTGAGGTGTGGTCTTGGA 59.695 50.000 0.00 0.00 0.00 3.53
2166 2601 2.867109 ATTGAGGTGTGGTCTTGGAG 57.133 50.000 0.00 0.00 0.00 3.86
2167 2602 1.801242 TTGAGGTGTGGTCTTGGAGA 58.199 50.000 0.00 0.00 0.00 3.71
2168 2603 2.030027 TGAGGTGTGGTCTTGGAGAT 57.970 50.000 0.00 0.00 0.00 2.75
2169 2604 1.625315 TGAGGTGTGGTCTTGGAGATG 59.375 52.381 0.00 0.00 0.00 2.90
2170 2605 1.625818 GAGGTGTGGTCTTGGAGATGT 59.374 52.381 0.00 0.00 0.00 3.06
2171 2606 2.039084 GAGGTGTGGTCTTGGAGATGTT 59.961 50.000 0.00 0.00 0.00 2.71
2172 2607 2.443255 AGGTGTGGTCTTGGAGATGTTT 59.557 45.455 0.00 0.00 0.00 2.83
2173 2608 2.814336 GGTGTGGTCTTGGAGATGTTTC 59.186 50.000 0.00 0.00 0.00 2.78
2174 2609 3.476552 GTGTGGTCTTGGAGATGTTTCA 58.523 45.455 0.00 0.00 0.00 2.69
2175 2610 4.074970 GTGTGGTCTTGGAGATGTTTCAT 58.925 43.478 0.00 0.00 0.00 2.57
2176 2611 4.520492 GTGTGGTCTTGGAGATGTTTCATT 59.480 41.667 0.00 0.00 0.00 2.57
2177 2612 5.010012 GTGTGGTCTTGGAGATGTTTCATTT 59.990 40.000 0.00 0.00 0.00 2.32
2178 2613 6.206634 GTGTGGTCTTGGAGATGTTTCATTTA 59.793 38.462 0.00 0.00 0.00 1.40
2179 2614 6.947733 TGTGGTCTTGGAGATGTTTCATTTAT 59.052 34.615 0.00 0.00 0.00 1.40
2180 2615 7.451255 TGTGGTCTTGGAGATGTTTCATTTATT 59.549 33.333 0.00 0.00 0.00 1.40
2181 2616 8.306761 GTGGTCTTGGAGATGTTTCATTTATTT 58.693 33.333 0.00 0.00 0.00 1.40
2182 2617 8.522830 TGGTCTTGGAGATGTTTCATTTATTTC 58.477 33.333 0.00 0.00 0.00 2.17
2183 2618 8.743714 GGTCTTGGAGATGTTTCATTTATTTCT 58.256 33.333 0.00 0.00 0.00 2.52
2184 2619 9.780413 GTCTTGGAGATGTTTCATTTATTTCTC 57.220 33.333 0.00 0.00 0.00 2.87
2185 2620 9.745018 TCTTGGAGATGTTTCATTTATTTCTCT 57.255 29.630 0.00 0.00 0.00 3.10
2205 2640 9.964354 TTTCTCTTATCTGAATCAAATCCTTCA 57.036 29.630 0.00 0.00 0.00 3.02
2206 2641 9.964354 TTCTCTTATCTGAATCAAATCCTTCAA 57.036 29.630 0.00 0.00 31.40 2.69
2207 2642 9.610705 TCTCTTATCTGAATCAAATCCTTCAAG 57.389 33.333 0.00 0.00 31.40 3.02
2208 2643 8.218338 TCTTATCTGAATCAAATCCTTCAAGC 57.782 34.615 0.00 0.00 31.40 4.01
2209 2644 7.830697 TCTTATCTGAATCAAATCCTTCAAGCA 59.169 33.333 0.00 0.00 31.40 3.91
2210 2645 8.529424 TTATCTGAATCAAATCCTTCAAGCAT 57.471 30.769 0.00 0.00 31.40 3.79
2211 2646 6.446781 TCTGAATCAAATCCTTCAAGCATC 57.553 37.500 0.00 0.00 31.40 3.91
2212 2647 5.065602 TCTGAATCAAATCCTTCAAGCATCG 59.934 40.000 0.00 0.00 31.40 3.84
2213 2648 4.701651 TGAATCAAATCCTTCAAGCATCGT 59.298 37.500 0.00 0.00 0.00 3.73
2214 2649 4.889832 ATCAAATCCTTCAAGCATCGTC 57.110 40.909 0.00 0.00 0.00 4.20
2215 2650 3.942829 TCAAATCCTTCAAGCATCGTCT 58.057 40.909 0.00 0.00 0.00 4.18
2216 2651 4.326826 TCAAATCCTTCAAGCATCGTCTT 58.673 39.130 0.00 0.00 0.00 3.01
2217 2652 5.487433 TCAAATCCTTCAAGCATCGTCTTA 58.513 37.500 0.00 0.00 0.00 2.10
2218 2653 6.115446 TCAAATCCTTCAAGCATCGTCTTAT 58.885 36.000 0.00 0.00 0.00 1.73
2219 2654 6.258727 TCAAATCCTTCAAGCATCGTCTTATC 59.741 38.462 0.00 0.00 0.00 1.75
2220 2655 4.736126 TCCTTCAAGCATCGTCTTATCA 57.264 40.909 0.00 0.00 0.00 2.15
2221 2656 5.084818 TCCTTCAAGCATCGTCTTATCAA 57.915 39.130 0.00 0.00 0.00 2.57
2222 2657 4.870426 TCCTTCAAGCATCGTCTTATCAAC 59.130 41.667 0.00 0.00 0.00 3.18
2223 2658 4.034510 CCTTCAAGCATCGTCTTATCAACC 59.965 45.833 0.00 0.00 0.00 3.77
2224 2659 3.531538 TCAAGCATCGTCTTATCAACCC 58.468 45.455 0.00 0.00 0.00 4.11
2225 2660 3.197766 TCAAGCATCGTCTTATCAACCCT 59.802 43.478 0.00 0.00 0.00 4.34
2226 2661 3.185246 AGCATCGTCTTATCAACCCTG 57.815 47.619 0.00 0.00 0.00 4.45
2227 2662 2.766263 AGCATCGTCTTATCAACCCTGA 59.234 45.455 0.00 0.00 35.56 3.86
2228 2663 3.197766 AGCATCGTCTTATCAACCCTGAA 59.802 43.478 0.00 0.00 34.49 3.02
2229 2664 4.130118 GCATCGTCTTATCAACCCTGAAT 58.870 43.478 0.00 0.00 34.49 2.57
2230 2665 4.576463 GCATCGTCTTATCAACCCTGAATT 59.424 41.667 0.00 0.00 34.49 2.17
2231 2666 5.758296 GCATCGTCTTATCAACCCTGAATTA 59.242 40.000 0.00 0.00 34.49 1.40
2232 2667 6.073548 GCATCGTCTTATCAACCCTGAATTAG 60.074 42.308 0.00 0.00 34.49 1.73
2233 2668 6.540438 TCGTCTTATCAACCCTGAATTAGT 57.460 37.500 0.00 0.00 34.49 2.24
2234 2669 7.649533 TCGTCTTATCAACCCTGAATTAGTA 57.350 36.000 0.00 0.00 34.49 1.82
2235 2670 8.246430 TCGTCTTATCAACCCTGAATTAGTAT 57.754 34.615 0.00 0.00 34.49 2.12
2236 2671 8.141909 TCGTCTTATCAACCCTGAATTAGTATG 58.858 37.037 0.00 0.00 34.49 2.39
2237 2672 7.926555 CGTCTTATCAACCCTGAATTAGTATGT 59.073 37.037 0.00 0.00 34.49 2.29
2238 2673 9.614792 GTCTTATCAACCCTGAATTAGTATGTT 57.385 33.333 0.00 0.00 34.49 2.71
2239 2674 9.832445 TCTTATCAACCCTGAATTAGTATGTTC 57.168 33.333 0.00 0.00 34.49 3.18
2240 2675 9.838339 CTTATCAACCCTGAATTAGTATGTTCT 57.162 33.333 0.00 0.00 34.49 3.01
2242 2677 7.921786 TCAACCCTGAATTAGTATGTTCTTG 57.078 36.000 0.00 0.00 0.00 3.02
2243 2678 7.685481 TCAACCCTGAATTAGTATGTTCTTGA 58.315 34.615 0.00 0.00 0.00 3.02
2244 2679 8.160765 TCAACCCTGAATTAGTATGTTCTTGAA 58.839 33.333 0.00 0.00 0.00 2.69
2245 2680 8.454106 CAACCCTGAATTAGTATGTTCTTGAAG 58.546 37.037 0.00 0.00 0.00 3.02
2246 2681 7.690256 ACCCTGAATTAGTATGTTCTTGAAGT 58.310 34.615 0.00 0.00 0.00 3.01
2247 2682 8.822805 ACCCTGAATTAGTATGTTCTTGAAGTA 58.177 33.333 0.00 0.00 0.00 2.24
2248 2683 9.667107 CCCTGAATTAGTATGTTCTTGAAGTAA 57.333 33.333 0.00 0.00 0.00 2.24
2256 2691 8.974060 AGTATGTTCTTGAAGTAAAAACCTGA 57.026 30.769 0.00 0.00 0.00 3.86
2257 2692 9.403583 AGTATGTTCTTGAAGTAAAAACCTGAA 57.596 29.630 0.00 0.00 0.00 3.02
2260 2695 8.925161 TGTTCTTGAAGTAAAAACCTGAAATG 57.075 30.769 0.00 0.00 0.00 2.32
2261 2696 8.744652 TGTTCTTGAAGTAAAAACCTGAAATGA 58.255 29.630 0.00 0.00 0.00 2.57
2262 2697 9.750125 GTTCTTGAAGTAAAAACCTGAAATGAT 57.250 29.630 0.00 0.00 0.00 2.45
2274 2709 9.927081 AAAACCTGAAATGATATGATAGTTCCT 57.073 29.630 0.00 0.00 0.00 3.36
2275 2710 8.915057 AACCTGAAATGATATGATAGTTCCTG 57.085 34.615 0.00 0.00 0.00 3.86
2276 2711 8.038862 ACCTGAAATGATATGATAGTTCCTGT 57.961 34.615 0.00 0.00 0.00 4.00
2277 2712 9.159254 ACCTGAAATGATATGATAGTTCCTGTA 57.841 33.333 0.00 0.00 0.00 2.74
2278 2713 9.429359 CCTGAAATGATATGATAGTTCCTGTAC 57.571 37.037 0.00 0.00 0.00 2.90
2280 2715 9.987272 TGAAATGATATGATAGTTCCTGTACTG 57.013 33.333 0.00 0.00 0.00 2.74
2283 2718 9.593565 AATGATATGATAGTTCCTGTACTGAGA 57.406 33.333 0.60 0.00 0.00 3.27
2284 2719 9.766754 ATGATATGATAGTTCCTGTACTGAGAT 57.233 33.333 0.60 0.00 0.00 2.75
2285 2720 9.237187 TGATATGATAGTTCCTGTACTGAGATC 57.763 37.037 0.60 0.00 0.00 2.75
2286 2721 9.461312 GATATGATAGTTCCTGTACTGAGATCT 57.539 37.037 0.00 0.00 0.00 2.75
2287 2722 6.951062 TGATAGTTCCTGTACTGAGATCTG 57.049 41.667 0.00 0.00 0.00 2.90
2288 2723 6.663734 TGATAGTTCCTGTACTGAGATCTGA 58.336 40.000 0.00 0.00 0.00 3.27
2289 2724 7.119387 TGATAGTTCCTGTACTGAGATCTGAA 58.881 38.462 0.00 0.00 0.00 3.02
2290 2725 7.615757 TGATAGTTCCTGTACTGAGATCTGAAA 59.384 37.037 0.00 0.00 0.00 2.69
2291 2726 6.672266 AGTTCCTGTACTGAGATCTGAAAA 57.328 37.500 0.00 0.00 0.00 2.29
2292 2727 7.251321 AGTTCCTGTACTGAGATCTGAAAAT 57.749 36.000 0.00 0.00 0.00 1.82
2293 2728 7.102346 AGTTCCTGTACTGAGATCTGAAAATG 58.898 38.462 0.00 0.00 0.00 2.32
2294 2729 6.611613 TCCTGTACTGAGATCTGAAAATGT 57.388 37.500 0.00 0.00 0.00 2.71
2295 2730 7.009179 TCCTGTACTGAGATCTGAAAATGTT 57.991 36.000 0.00 0.00 0.00 2.71
2296 2731 7.099764 TCCTGTACTGAGATCTGAAAATGTTC 58.900 38.462 0.00 0.00 0.00 3.18
2297 2732 6.875726 CCTGTACTGAGATCTGAAAATGTTCA 59.124 38.462 0.00 0.00 41.57 3.18
2298 2733 7.388776 CCTGTACTGAGATCTGAAAATGTTCAA 59.611 37.037 0.00 0.00 43.18 2.69
2299 2734 8.853077 TGTACTGAGATCTGAAAATGTTCAAT 57.147 30.769 0.00 0.00 43.18 2.57
2300 2735 8.724229 TGTACTGAGATCTGAAAATGTTCAATG 58.276 33.333 0.00 0.00 43.18 2.82
2301 2736 6.618811 ACTGAGATCTGAAAATGTTCAATGC 58.381 36.000 0.00 0.00 43.18 3.56
2302 2737 6.433404 ACTGAGATCTGAAAATGTTCAATGCT 59.567 34.615 0.00 0.00 43.18 3.79
2303 2738 6.617879 TGAGATCTGAAAATGTTCAATGCTG 58.382 36.000 0.00 0.00 43.18 4.41
2304 2739 6.208007 TGAGATCTGAAAATGTTCAATGCTGT 59.792 34.615 0.00 0.00 43.18 4.40
2305 2740 6.989659 AGATCTGAAAATGTTCAATGCTGTT 58.010 32.000 0.00 0.00 43.18 3.16
2306 2741 7.439381 AGATCTGAAAATGTTCAATGCTGTTT 58.561 30.769 0.00 0.00 43.18 2.83
2307 2742 7.597743 AGATCTGAAAATGTTCAATGCTGTTTC 59.402 33.333 0.00 0.00 43.18 2.78
2308 2743 6.808829 TCTGAAAATGTTCAATGCTGTTTCT 58.191 32.000 0.00 0.00 43.18 2.52
2309 2744 6.919662 TCTGAAAATGTTCAATGCTGTTTCTC 59.080 34.615 0.00 0.00 43.18 2.87
2310 2745 6.571605 TGAAAATGTTCAATGCTGTTTCTCA 58.428 32.000 0.00 0.00 40.87 3.27
2311 2746 6.476380 TGAAAATGTTCAATGCTGTTTCTCAC 59.524 34.615 0.00 0.00 40.87 3.51
2312 2747 5.518848 AATGTTCAATGCTGTTTCTCACA 57.481 34.783 0.00 0.00 0.00 3.58
2313 2748 5.717078 ATGTTCAATGCTGTTTCTCACAT 57.283 34.783 0.00 0.00 33.76 3.21
2314 2749 5.518848 TGTTCAATGCTGTTTCTCACATT 57.481 34.783 0.00 0.00 33.76 2.71
2315 2750 5.904941 TGTTCAATGCTGTTTCTCACATTT 58.095 33.333 0.00 0.00 33.76 2.32
2316 2751 6.339730 TGTTCAATGCTGTTTCTCACATTTT 58.660 32.000 0.00 0.00 33.76 1.82
2317 2752 6.256104 TGTTCAATGCTGTTTCTCACATTTTG 59.744 34.615 0.00 0.00 33.76 2.44
2318 2753 5.904941 TCAATGCTGTTTCTCACATTTTGT 58.095 33.333 0.00 0.00 33.76 2.83
2319 2754 6.339730 TCAATGCTGTTTCTCACATTTTGTT 58.660 32.000 0.00 0.00 33.76 2.83
2320 2755 6.817641 TCAATGCTGTTTCTCACATTTTGTTT 59.182 30.769 0.00 0.00 33.76 2.83
2321 2756 7.978414 TCAATGCTGTTTCTCACATTTTGTTTA 59.022 29.630 0.00 0.00 33.76 2.01
2322 2757 8.767085 CAATGCTGTTTCTCACATTTTGTTTAT 58.233 29.630 0.00 0.00 33.76 1.40
2323 2758 7.928908 TGCTGTTTCTCACATTTTGTTTATC 57.071 32.000 0.00 0.00 33.76 1.75
2324 2759 7.487484 TGCTGTTTCTCACATTTTGTTTATCA 58.513 30.769 0.00 0.00 33.76 2.15
2325 2760 7.648908 TGCTGTTTCTCACATTTTGTTTATCAG 59.351 33.333 0.00 0.00 33.76 2.90
2326 2761 7.649306 GCTGTTTCTCACATTTTGTTTATCAGT 59.351 33.333 0.00 0.00 33.76 3.41
2327 2762 9.520204 CTGTTTCTCACATTTTGTTTATCAGTT 57.480 29.630 0.00 0.00 33.76 3.16
2328 2763 9.515020 TGTTTCTCACATTTTGTTTATCAGTTC 57.485 29.630 0.00 0.00 0.00 3.01
2329 2764 9.515020 GTTTCTCACATTTTGTTTATCAGTTCA 57.485 29.630 0.00 0.00 0.00 3.18
2330 2765 9.734620 TTTCTCACATTTTGTTTATCAGTTCAG 57.265 29.630 0.00 0.00 0.00 3.02
2331 2766 8.450578 TCTCACATTTTGTTTATCAGTTCAGT 57.549 30.769 0.00 0.00 0.00 3.41
2332 2767 8.902806 TCTCACATTTTGTTTATCAGTTCAGTT 58.097 29.630 0.00 0.00 0.00 3.16
2333 2768 8.854979 TCACATTTTGTTTATCAGTTCAGTTG 57.145 30.769 0.00 0.00 0.00 3.16
2334 2769 8.681806 TCACATTTTGTTTATCAGTTCAGTTGA 58.318 29.630 0.00 0.00 0.00 3.18
2335 2770 9.299963 CACATTTTGTTTATCAGTTCAGTTGAA 57.700 29.630 0.00 0.00 0.00 2.69
2336 2771 9.520204 ACATTTTGTTTATCAGTTCAGTTGAAG 57.480 29.630 0.00 0.00 34.27 3.02
2337 2772 7.985634 TTTTGTTTATCAGTTCAGTTGAAGC 57.014 32.000 0.00 0.00 34.27 3.86
2338 2773 6.942532 TTGTTTATCAGTTCAGTTGAAGCT 57.057 33.333 0.00 0.00 34.27 3.74
2339 2774 8.445275 TTTGTTTATCAGTTCAGTTGAAGCTA 57.555 30.769 0.00 0.00 34.27 3.32
2340 2775 8.621532 TTGTTTATCAGTTCAGTTGAAGCTAT 57.378 30.769 0.00 0.00 34.27 2.97
2341 2776 8.256611 TGTTTATCAGTTCAGTTGAAGCTATC 57.743 34.615 0.00 0.00 34.27 2.08
2342 2777 8.097038 TGTTTATCAGTTCAGTTGAAGCTATCT 58.903 33.333 0.00 0.00 34.27 1.98
2343 2778 8.940952 GTTTATCAGTTCAGTTGAAGCTATCTT 58.059 33.333 0.00 0.00 34.27 2.40
2344 2779 6.981762 ATCAGTTCAGTTGAAGCTATCTTG 57.018 37.500 0.00 0.00 34.27 3.02
2345 2780 5.858381 TCAGTTCAGTTGAAGCTATCTTGT 58.142 37.500 0.00 0.00 34.27 3.16
2346 2781 5.698089 TCAGTTCAGTTGAAGCTATCTTGTG 59.302 40.000 0.00 0.00 34.27 3.33
2347 2782 5.698089 CAGTTCAGTTGAAGCTATCTTGTGA 59.302 40.000 0.00 0.00 34.27 3.58
2348 2783 6.203530 CAGTTCAGTTGAAGCTATCTTGTGAA 59.796 38.462 0.00 0.00 34.27 3.18
2349 2784 6.939163 AGTTCAGTTGAAGCTATCTTGTGAAT 59.061 34.615 0.00 0.00 34.27 2.57
2350 2785 7.446625 AGTTCAGTTGAAGCTATCTTGTGAATT 59.553 33.333 0.00 0.00 34.27 2.17
2351 2786 7.137490 TCAGTTGAAGCTATCTTGTGAATTG 57.863 36.000 0.00 0.00 31.48 2.32
2352 2787 5.798934 CAGTTGAAGCTATCTTGTGAATTGC 59.201 40.000 0.00 0.00 31.48 3.56
2353 2788 5.474532 AGTTGAAGCTATCTTGTGAATTGCA 59.525 36.000 0.00 0.00 31.48 4.08
2354 2789 5.963176 TGAAGCTATCTTGTGAATTGCAA 57.037 34.783 0.00 0.00 31.48 4.08
2355 2790 6.330004 TGAAGCTATCTTGTGAATTGCAAA 57.670 33.333 1.71 0.00 31.48 3.68
2356 2791 6.747125 TGAAGCTATCTTGTGAATTGCAAAA 58.253 32.000 1.71 0.00 31.48 2.44
2357 2792 7.380536 TGAAGCTATCTTGTGAATTGCAAAAT 58.619 30.769 1.71 0.00 31.48 1.82
2358 2793 7.329962 TGAAGCTATCTTGTGAATTGCAAAATG 59.670 33.333 1.71 0.00 31.48 2.32
2359 2794 6.927416 AGCTATCTTGTGAATTGCAAAATGA 58.073 32.000 1.71 0.00 0.00 2.57
2360 2795 7.380536 AGCTATCTTGTGAATTGCAAAATGAA 58.619 30.769 1.71 0.00 0.00 2.57
2361 2796 8.038944 AGCTATCTTGTGAATTGCAAAATGAAT 58.961 29.630 1.71 0.00 0.00 2.57
2362 2797 8.662141 GCTATCTTGTGAATTGCAAAATGAATT 58.338 29.630 1.71 0.00 0.00 2.17
2364 2799 8.610248 ATCTTGTGAATTGCAAAATGAATTCA 57.390 26.923 11.26 11.26 43.18 2.57
2365 2800 8.434733 TCTTGTGAATTGCAAAATGAATTCAA 57.565 26.923 13.09 0.00 45.53 2.69
2366 2801 8.890718 TCTTGTGAATTGCAAAATGAATTCAAA 58.109 25.926 13.09 5.02 45.53 2.69
2367 2802 9.672086 CTTGTGAATTGCAAAATGAATTCAAAT 57.328 25.926 13.09 3.63 45.53 2.32
2368 2803 9.452065 TTGTGAATTGCAAAATGAATTCAAATG 57.548 25.926 13.09 12.34 45.53 2.32
2369 2804 7.591795 TGTGAATTGCAAAATGAATTCAAATGC 59.408 29.630 24.91 24.91 45.53 3.56
2370 2805 7.591795 GTGAATTGCAAAATGAATTCAAATGCA 59.408 29.630 28.00 28.00 45.53 3.96
2371 2806 8.135529 TGAATTGCAAAATGAATTCAAATGCAA 58.864 25.926 35.19 35.19 46.39 4.08
2372 2807 7.861176 ATTGCAAAATGAATTCAAATGCAAC 57.139 28.000 35.52 17.79 45.82 4.17
2373 2808 5.441543 TGCAAAATGAATTCAAATGCAACG 58.558 33.333 28.86 10.76 38.70 4.10
2374 2809 4.318854 GCAAAATGAATTCAAATGCAACGC 59.681 37.500 25.91 13.46 34.81 4.84
2375 2810 4.666928 AAATGAATTCAAATGCAACGCC 57.333 36.364 13.09 0.00 0.00 5.68
2376 2811 2.077413 TGAATTCAAATGCAACGCCC 57.923 45.000 5.45 0.00 0.00 6.13
2377 2812 1.342496 TGAATTCAAATGCAACGCCCA 59.658 42.857 5.45 0.00 0.00 5.36
2378 2813 2.224137 TGAATTCAAATGCAACGCCCAA 60.224 40.909 5.45 0.00 0.00 4.12
2379 2814 2.766345 ATTCAAATGCAACGCCCAAT 57.234 40.000 0.00 0.00 0.00 3.16
2380 2815 2.077413 TTCAAATGCAACGCCCAATC 57.923 45.000 0.00 0.00 0.00 2.67
2381 2816 1.255882 TCAAATGCAACGCCCAATCT 58.744 45.000 0.00 0.00 0.00 2.40
2382 2817 2.441410 TCAAATGCAACGCCCAATCTA 58.559 42.857 0.00 0.00 0.00 1.98
2383 2818 3.023119 TCAAATGCAACGCCCAATCTAT 58.977 40.909 0.00 0.00 0.00 1.98
2384 2819 3.446873 TCAAATGCAACGCCCAATCTATT 59.553 39.130 0.00 0.00 0.00 1.73
2385 2820 3.441496 AATGCAACGCCCAATCTATTG 57.559 42.857 0.00 0.00 37.52 1.90
2386 2821 1.832883 TGCAACGCCCAATCTATTGT 58.167 45.000 2.25 0.00 36.06 2.71
2387 2822 2.166829 TGCAACGCCCAATCTATTGTT 58.833 42.857 2.25 0.00 36.06 2.83
2388 2823 2.094803 TGCAACGCCCAATCTATTGTTG 60.095 45.455 2.25 0.00 36.06 3.33
2389 2824 2.529151 CAACGCCCAATCTATTGTTGC 58.471 47.619 2.25 3.82 36.06 4.17
2390 2825 2.128771 ACGCCCAATCTATTGTTGCT 57.871 45.000 10.71 0.16 36.06 3.91
2391 2826 3.275617 ACGCCCAATCTATTGTTGCTA 57.724 42.857 10.71 0.00 36.06 3.49
2392 2827 2.943033 ACGCCCAATCTATTGTTGCTAC 59.057 45.455 10.71 0.00 36.06 3.58
2393 2828 3.206150 CGCCCAATCTATTGTTGCTACT 58.794 45.455 0.00 0.00 36.06 2.57
2394 2829 3.002656 CGCCCAATCTATTGTTGCTACTG 59.997 47.826 0.00 0.00 36.06 2.74
2395 2830 3.316308 GCCCAATCTATTGTTGCTACTGG 59.684 47.826 0.00 0.00 36.06 4.00
2396 2831 3.885297 CCCAATCTATTGTTGCTACTGGG 59.115 47.826 5.40 5.40 36.06 4.45
2397 2832 4.385199 CCCAATCTATTGTTGCTACTGGGA 60.385 45.833 12.22 1.37 43.11 4.37
2398 2833 5.380043 CCAATCTATTGTTGCTACTGGGAT 58.620 41.667 0.00 0.00 36.06 3.85
2399 2834 5.471456 CCAATCTATTGTTGCTACTGGGATC 59.529 44.000 0.00 0.00 36.06 3.36
2400 2835 6.294473 CAATCTATTGTTGCTACTGGGATCT 58.706 40.000 0.00 0.00 33.22 2.75
2401 2836 5.282055 TCTATTGTTGCTACTGGGATCTG 57.718 43.478 0.00 0.00 0.00 2.90
2402 2837 4.962362 TCTATTGTTGCTACTGGGATCTGA 59.038 41.667 0.00 0.00 0.00 3.27
2403 2838 4.574674 ATTGTTGCTACTGGGATCTGAA 57.425 40.909 0.00 0.00 0.00 3.02
2404 2839 4.365514 TTGTTGCTACTGGGATCTGAAA 57.634 40.909 0.00 0.00 0.00 2.69
2405 2840 4.365514 TGTTGCTACTGGGATCTGAAAA 57.634 40.909 0.00 0.00 0.00 2.29
2406 2841 4.922206 TGTTGCTACTGGGATCTGAAAAT 58.078 39.130 0.00 0.00 0.00 1.82
2407 2842 4.701651 TGTTGCTACTGGGATCTGAAAATG 59.298 41.667 0.00 0.00 0.00 2.32
2408 2843 4.574674 TGCTACTGGGATCTGAAAATGT 57.425 40.909 0.00 0.00 0.00 2.71
2409 2844 4.264253 TGCTACTGGGATCTGAAAATGTG 58.736 43.478 0.00 0.00 0.00 3.21
2410 2845 4.263462 TGCTACTGGGATCTGAAAATGTGT 60.263 41.667 0.00 0.00 0.00 3.72
2411 2846 4.702131 GCTACTGGGATCTGAAAATGTGTT 59.298 41.667 0.00 0.00 0.00 3.32
2412 2847 5.183904 GCTACTGGGATCTGAAAATGTGTTT 59.816 40.000 0.00 0.00 0.00 2.83
2413 2848 6.294731 GCTACTGGGATCTGAAAATGTGTTTT 60.295 38.462 0.00 0.00 40.13 2.43
2429 2864 9.442047 AAATGTGTTTTCCTTGTTTATGTTTGA 57.558 25.926 0.00 0.00 0.00 2.69
2430 2865 9.612066 AATGTGTTTTCCTTGTTTATGTTTGAT 57.388 25.926 0.00 0.00 0.00 2.57
2431 2866 8.417780 TGTGTTTTCCTTGTTTATGTTTGATG 57.582 30.769 0.00 0.00 0.00 3.07
2432 2867 7.010923 TGTGTTTTCCTTGTTTATGTTTGATGC 59.989 33.333 0.00 0.00 0.00 3.91
2433 2868 7.224557 GTGTTTTCCTTGTTTATGTTTGATGCT 59.775 33.333 0.00 0.00 0.00 3.79
2434 2869 8.417106 TGTTTTCCTTGTTTATGTTTGATGCTA 58.583 29.630 0.00 0.00 0.00 3.49
2435 2870 8.699749 GTTTTCCTTGTTTATGTTTGATGCTAC 58.300 33.333 0.00 0.00 0.00 3.58
2436 2871 7.759489 TTCCTTGTTTATGTTTGATGCTACT 57.241 32.000 0.00 0.00 0.00 2.57
2437 2872 7.759489 TCCTTGTTTATGTTTGATGCTACTT 57.241 32.000 0.00 0.00 0.00 2.24
2438 2873 7.816640 TCCTTGTTTATGTTTGATGCTACTTC 58.183 34.615 0.00 0.00 0.00 3.01
2439 2874 7.665559 TCCTTGTTTATGTTTGATGCTACTTCT 59.334 33.333 0.00 0.00 0.00 2.85
2440 2875 8.946085 CCTTGTTTATGTTTGATGCTACTTCTA 58.054 33.333 0.00 0.00 0.00 2.10
2460 2895 9.408648 ACTTCTATTAACATTATGTTTGGGGAG 57.591 33.333 16.08 10.24 41.45 4.30
2461 2896 8.760980 TTCTATTAACATTATGTTTGGGGAGG 57.239 34.615 16.08 1.84 41.45 4.30
2462 2897 7.878495 TCTATTAACATTATGTTTGGGGAGGT 58.122 34.615 16.08 0.00 41.45 3.85
2463 2898 7.996644 TCTATTAACATTATGTTTGGGGAGGTC 59.003 37.037 16.08 0.00 41.45 3.85
2464 2899 2.999331 ACATTATGTTTGGGGAGGTCG 58.001 47.619 0.00 0.00 0.00 4.79
2465 2900 2.574369 ACATTATGTTTGGGGAGGTCGA 59.426 45.455 0.00 0.00 0.00 4.20
2466 2901 3.009695 ACATTATGTTTGGGGAGGTCGAA 59.990 43.478 0.00 0.00 0.00 3.71
2467 2902 3.343941 TTATGTTTGGGGAGGTCGAAG 57.656 47.619 0.00 0.00 0.00 3.79
2468 2903 0.322546 ATGTTTGGGGAGGTCGAAGC 60.323 55.000 0.00 0.00 0.00 3.86
2469 2904 1.072505 GTTTGGGGAGGTCGAAGCA 59.927 57.895 0.00 0.00 0.00 3.91
2470 2905 0.322546 GTTTGGGGAGGTCGAAGCAT 60.323 55.000 0.00 0.00 0.00 3.79
2471 2906 0.404040 TTTGGGGAGGTCGAAGCATT 59.596 50.000 0.00 0.00 0.00 3.56
2472 2907 1.281419 TTGGGGAGGTCGAAGCATTA 58.719 50.000 0.00 0.00 0.00 1.90
2473 2908 1.507140 TGGGGAGGTCGAAGCATTAT 58.493 50.000 0.00 0.00 0.00 1.28
2474 2909 1.140852 TGGGGAGGTCGAAGCATTATG 59.859 52.381 0.00 0.00 0.00 1.90
2475 2910 1.416401 GGGGAGGTCGAAGCATTATGA 59.584 52.381 0.00 0.00 0.00 2.15
2476 2911 2.039084 GGGGAGGTCGAAGCATTATGAT 59.961 50.000 0.00 0.00 0.00 2.45
2477 2912 3.496870 GGGGAGGTCGAAGCATTATGATT 60.497 47.826 0.00 0.00 0.00 2.57
2478 2913 3.499918 GGGAGGTCGAAGCATTATGATTG 59.500 47.826 0.00 0.00 0.00 2.67
2479 2914 4.380531 GGAGGTCGAAGCATTATGATTGA 58.619 43.478 0.00 0.00 0.00 2.57
2480 2915 4.450419 GGAGGTCGAAGCATTATGATTGAG 59.550 45.833 0.00 0.00 0.00 3.02
2481 2916 4.384056 AGGTCGAAGCATTATGATTGAGG 58.616 43.478 0.00 0.00 0.00 3.86
2482 2917 4.130118 GGTCGAAGCATTATGATTGAGGT 58.870 43.478 0.00 0.00 0.00 3.85
2483 2918 4.024556 GGTCGAAGCATTATGATTGAGGTG 60.025 45.833 0.00 0.00 0.00 4.00
2484 2919 4.572389 GTCGAAGCATTATGATTGAGGTGT 59.428 41.667 0.00 0.00 0.00 4.16
2485 2920 4.571984 TCGAAGCATTATGATTGAGGTGTG 59.428 41.667 0.00 0.00 0.00 3.82
2486 2921 4.571984 CGAAGCATTATGATTGAGGTGTGA 59.428 41.667 0.00 0.00 0.00 3.58
2487 2922 5.237996 CGAAGCATTATGATTGAGGTGTGAT 59.762 40.000 0.00 0.00 0.00 3.06
2488 2923 6.565435 CGAAGCATTATGATTGAGGTGTGATC 60.565 42.308 0.00 0.00 0.00 2.92
2489 2924 5.938279 AGCATTATGATTGAGGTGTGATCT 58.062 37.500 0.00 0.00 0.00 2.75
2490 2925 6.363065 AGCATTATGATTGAGGTGTGATCTT 58.637 36.000 0.00 0.00 0.00 2.40
2491 2926 6.832384 AGCATTATGATTGAGGTGTGATCTTT 59.168 34.615 0.00 0.00 0.00 2.52
2492 2927 6.916387 GCATTATGATTGAGGTGTGATCTTTG 59.084 38.462 0.00 0.00 0.00 2.77
2493 2928 7.201758 GCATTATGATTGAGGTGTGATCTTTGA 60.202 37.037 0.00 0.00 0.00 2.69
2494 2929 7.854557 TTATGATTGAGGTGTGATCTTTGAG 57.145 36.000 0.00 0.00 0.00 3.02
2495 2930 5.488262 TGATTGAGGTGTGATCTTTGAGA 57.512 39.130 0.00 0.00 0.00 3.27
2496 2931 6.058553 TGATTGAGGTGTGATCTTTGAGAT 57.941 37.500 0.00 0.00 37.73 2.75
2497 2932 5.878669 TGATTGAGGTGTGATCTTTGAGATG 59.121 40.000 0.00 0.00 34.53 2.90
2498 2933 3.603532 TGAGGTGTGATCTTTGAGATGC 58.396 45.455 0.00 0.00 34.53 3.91
2499 2934 3.008266 TGAGGTGTGATCTTTGAGATGCA 59.992 43.478 0.00 0.00 34.53 3.96
2500 2935 3.607741 AGGTGTGATCTTTGAGATGCAG 58.392 45.455 0.00 0.00 34.53 4.41
2501 2936 3.008813 AGGTGTGATCTTTGAGATGCAGT 59.991 43.478 0.00 0.00 34.53 4.40
2502 2937 3.126514 GGTGTGATCTTTGAGATGCAGTG 59.873 47.826 0.00 0.00 34.53 3.66
2503 2938 3.750130 GTGTGATCTTTGAGATGCAGTGT 59.250 43.478 0.00 0.00 34.53 3.55
2504 2939 3.749609 TGTGATCTTTGAGATGCAGTGTG 59.250 43.478 0.00 0.00 34.53 3.82
2505 2940 3.750130 GTGATCTTTGAGATGCAGTGTGT 59.250 43.478 0.00 0.00 34.53 3.72
2506 2941 4.214971 GTGATCTTTGAGATGCAGTGTGTT 59.785 41.667 0.00 0.00 34.53 3.32
2507 2942 4.823442 TGATCTTTGAGATGCAGTGTGTTT 59.177 37.500 0.00 0.00 34.53 2.83
2508 2943 4.556942 TCTTTGAGATGCAGTGTGTTTG 57.443 40.909 0.00 0.00 0.00 2.93
2509 2944 3.947196 TCTTTGAGATGCAGTGTGTTTGT 59.053 39.130 0.00 0.00 0.00 2.83
2510 2945 3.969117 TTGAGATGCAGTGTGTTTGTC 57.031 42.857 0.00 0.00 0.00 3.18
2511 2946 1.866601 TGAGATGCAGTGTGTTTGTCG 59.133 47.619 0.00 0.00 0.00 4.35
2512 2947 2.135139 GAGATGCAGTGTGTTTGTCGA 58.865 47.619 0.00 0.00 0.00 4.20
2513 2948 2.543848 GAGATGCAGTGTGTTTGTCGAA 59.456 45.455 0.00 0.00 0.00 3.71
2514 2949 3.141398 AGATGCAGTGTGTTTGTCGAAT 58.859 40.909 0.00 0.00 0.00 3.34
2515 2950 2.753989 TGCAGTGTGTTTGTCGAATG 57.246 45.000 0.00 0.00 0.00 2.67
2516 2951 1.268488 TGCAGTGTGTTTGTCGAATGC 60.268 47.619 0.00 0.00 0.00 3.56
2517 2952 1.002468 GCAGTGTGTTTGTCGAATGCT 60.002 47.619 0.00 0.00 0.00 3.79
2518 2953 2.642995 CAGTGTGTTTGTCGAATGCTG 58.357 47.619 0.00 0.00 0.00 4.41
2519 2954 1.603802 AGTGTGTTTGTCGAATGCTGG 59.396 47.619 0.00 0.00 0.00 4.85
2520 2955 1.601903 GTGTGTTTGTCGAATGCTGGA 59.398 47.619 0.00 0.00 0.00 3.86
2521 2956 2.032799 GTGTGTTTGTCGAATGCTGGAA 59.967 45.455 0.00 0.00 0.00 3.53
2522 2957 2.884012 TGTGTTTGTCGAATGCTGGAAT 59.116 40.909 0.00 0.00 0.00 3.01
2523 2958 3.236816 GTGTTTGTCGAATGCTGGAATG 58.763 45.455 0.00 0.00 0.00 2.67
2524 2959 3.058293 GTGTTTGTCGAATGCTGGAATGA 60.058 43.478 0.00 0.00 0.00 2.57
2525 2960 3.567585 TGTTTGTCGAATGCTGGAATGAA 59.432 39.130 0.00 0.00 0.00 2.57
2526 2961 4.037327 TGTTTGTCGAATGCTGGAATGAAA 59.963 37.500 0.00 0.00 0.00 2.69
2527 2962 4.844998 TTGTCGAATGCTGGAATGAAAA 57.155 36.364 0.00 0.00 0.00 2.29
2528 2963 4.424061 TGTCGAATGCTGGAATGAAAAG 57.576 40.909 0.00 0.00 0.00 2.27
2529 2964 3.820467 TGTCGAATGCTGGAATGAAAAGT 59.180 39.130 0.00 0.00 0.00 2.66
2530 2965 5.000591 TGTCGAATGCTGGAATGAAAAGTA 58.999 37.500 0.00 0.00 0.00 2.24
2531 2966 5.471797 TGTCGAATGCTGGAATGAAAAGTAA 59.528 36.000 0.00 0.00 0.00 2.24
2532 2967 6.150976 TGTCGAATGCTGGAATGAAAAGTAAT 59.849 34.615 0.00 0.00 0.00 1.89
2533 2968 6.470235 GTCGAATGCTGGAATGAAAAGTAATG 59.530 38.462 0.00 0.00 0.00 1.90
2539 2974 6.209192 TGCTGGAATGAAAAGTAATGTCATGT 59.791 34.615 0.00 0.00 32.38 3.21
2568 3003 9.447157 CTTTCTATATCTGAATCAAATCCCTCC 57.553 37.037 0.00 0.00 0.00 4.30
2571 3006 8.948362 TCTATATCTGAATCAAATCCCTCCAAA 58.052 33.333 0.00 0.00 0.00 3.28
2572 3007 9.578576 CTATATCTGAATCAAATCCCTCCAAAA 57.421 33.333 0.00 0.00 0.00 2.44
2573 3008 8.843308 ATATCTGAATCAAATCCCTCCAAAAA 57.157 30.769 0.00 0.00 0.00 1.94
2574 3009 7.744678 ATCTGAATCAAATCCCTCCAAAAAT 57.255 32.000 0.00 0.00 0.00 1.82
2575 3010 8.843308 ATCTGAATCAAATCCCTCCAAAAATA 57.157 30.769 0.00 0.00 0.00 1.40
2576 3011 8.843308 TCTGAATCAAATCCCTCCAAAAATAT 57.157 30.769 0.00 0.00 0.00 1.28
2577 3012 8.698210 TCTGAATCAAATCCCTCCAAAAATATG 58.302 33.333 0.00 0.00 0.00 1.78
2587 3022 7.181361 TCCCTCCAAAAATATGTCTGATCAAA 58.819 34.615 0.00 0.00 0.00 2.69
2588 3023 7.122650 TCCCTCCAAAAATATGTCTGATCAAAC 59.877 37.037 0.00 0.00 0.00 2.93
2591 3026 9.177608 CTCCAAAAATATGTCTGATCAAACCTA 57.822 33.333 0.00 0.00 0.00 3.08
2629 3200 6.723298 AATAGTTCCTGTACTGAGATCTGG 57.277 41.667 0.00 0.00 0.00 3.86
2677 3248 0.764890 TTGAGGTGTGGTCTTGGAGG 59.235 55.000 0.00 0.00 0.00 4.30
2680 3251 1.600916 GGTGTGGTCTTGGAGGTGC 60.601 63.158 0.00 0.00 0.00 5.01
2688 3259 0.111061 TCTTGGAGGTGCATTGCTGT 59.889 50.000 10.49 0.00 0.00 4.40
2690 3261 0.467844 TTGGAGGTGCATTGCTGTGT 60.468 50.000 10.49 0.00 0.00 3.72
2691 3262 1.174078 TGGAGGTGCATTGCTGTGTG 61.174 55.000 10.49 0.00 0.00 3.82
2692 3263 1.174712 GGAGGTGCATTGCTGTGTGT 61.175 55.000 10.49 0.00 0.00 3.72
2694 3265 0.670162 AGGTGCATTGCTGTGTGTTC 59.330 50.000 10.49 0.00 0.00 3.18
2696 3267 1.000060 GGTGCATTGCTGTGTGTTCAT 60.000 47.619 10.49 0.00 0.00 2.57
2697 3268 2.546373 GGTGCATTGCTGTGTGTTCATT 60.546 45.455 10.49 0.00 0.00 2.57
2698 3269 2.473609 GTGCATTGCTGTGTGTTCATTG 59.526 45.455 10.49 0.00 0.00 2.82
2699 3270 2.361438 TGCATTGCTGTGTGTTCATTGA 59.639 40.909 10.49 0.00 0.00 2.57
2700 3271 3.181478 TGCATTGCTGTGTGTTCATTGAA 60.181 39.130 10.49 0.00 0.00 2.69
2701 3272 3.991773 GCATTGCTGTGTGTTCATTGAAT 59.008 39.130 1.78 0.00 0.00 2.57
2706 3277 5.761003 TGCTGTGTGTTCATTGAATAGTTG 58.239 37.500 1.78 0.00 0.00 3.16
2707 3278 5.530543 TGCTGTGTGTTCATTGAATAGTTGA 59.469 36.000 1.78 0.00 0.00 3.18
2708 3279 6.039159 TGCTGTGTGTTCATTGAATAGTTGAA 59.961 34.615 1.78 0.00 0.00 2.69
2709 3280 6.360681 GCTGTGTGTTCATTGAATAGTTGAAC 59.639 38.462 1.78 7.82 45.94 3.18
2710 3281 7.566760 TGTGTGTTCATTGAATAGTTGAACT 57.433 32.000 2.37 2.37 45.93 3.01
2711 3282 8.669946 TGTGTGTTCATTGAATAGTTGAACTA 57.330 30.769 7.60 7.60 45.93 2.24
2712 3283 9.114952 TGTGTGTTCATTGAATAGTTGAACTAA 57.885 29.630 9.35 0.00 45.93 2.24
2713 3284 9.599322 GTGTGTTCATTGAATAGTTGAACTAAG 57.401 33.333 9.35 0.00 45.93 2.18
2714 3285 9.337396 TGTGTTCATTGAATAGTTGAACTAAGT 57.663 29.630 9.35 0.36 45.93 2.24
2765 3336 4.044065 TCAAATCCCCCAAGTATTGTCTGT 59.956 41.667 0.00 0.00 46.99 3.41
2772 3343 4.398319 CCCAAGTATTGTCTGTTCAACCT 58.602 43.478 0.00 0.00 46.99 3.50
2778 3393 7.645340 CAAGTATTGTCTGTTCAACCTTGAAAG 59.355 37.037 2.00 3.69 44.02 2.62
2875 3603 6.558009 TGAAGCTATCATCTGAATTGCAAAC 58.442 36.000 1.71 1.21 31.50 2.93
2908 3636 3.244146 TGCAATTCCCAATCTGTTGTTGG 60.244 43.478 0.00 0.00 44.54 3.77
2913 3641 1.270550 CCCAATCTGTTGTTGGTGCTC 59.729 52.381 4.40 0.00 43.65 4.26
2937 4254 8.412608 TCAGATATGAAAATCTCGTGTTTCTC 57.587 34.615 0.00 0.00 33.87 2.87
2940 4257 2.478894 TGAAAATCTCGTGTTTCTCGCC 59.521 45.455 0.00 0.00 35.26 5.54
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
275 276 5.629079 AACAGATTTTCAGGAAACGGATC 57.371 39.130 0.00 0.00 33.48 3.36
301 302 4.573201 TGGTTCAGTTTGTCTTAGGAAACG 59.427 41.667 0.00 0.00 37.19 3.60
317 318 7.761409 TCAATCGATTCCTTTTATTGGTTCAG 58.239 34.615 7.92 0.00 0.00 3.02
490 493 8.630037 CCACTCTTTATTACAACCAGAACTTTT 58.370 33.333 0.00 0.00 0.00 2.27
529 532 2.140792 CCCACCCTAGTCCATCGGG 61.141 68.421 0.00 0.00 43.79 5.14
539 542 4.033251 CCACCCCCTCCCACCCTA 62.033 72.222 0.00 0.00 0.00 3.53
578 583 5.837437 TGGTTTGTGATTTATTTTCGCTGT 58.163 33.333 0.00 0.00 0.00 4.40
592 597 3.172106 TCCCGCCCTGGTTTGTGA 61.172 61.111 0.00 0.00 35.15 3.58
644 650 6.526674 GTGAATCATCTTCGCGGTTTATTTTT 59.473 34.615 6.13 0.00 0.00 1.94
658 664 2.744202 GCACGAGTTGGTGAATCATCTT 59.256 45.455 0.00 0.00 40.38 2.40
662 668 2.183478 ATGCACGAGTTGGTGAATCA 57.817 45.000 0.00 0.00 40.38 2.57
729 735 5.475220 ACCCAAATCGTGTATTCATTTGTGA 59.525 36.000 0.00 0.00 32.18 3.58
785 797 1.631388 CTATCCGGCTCTCTCTCCCTA 59.369 57.143 0.00 0.00 0.00 3.53
799 811 2.990066 AGCTTTCCTTCACCTATCCG 57.010 50.000 0.00 0.00 0.00 4.18
991 1043 0.560193 TGGATGAGAGAGAGAGGGGG 59.440 60.000 0.00 0.00 0.00 5.40
992 1044 2.528564 GATGGATGAGAGAGAGAGGGG 58.471 57.143 0.00 0.00 0.00 4.79
1024 1084 2.844839 CGGTGGGGAGGGAGGATC 60.845 72.222 0.00 0.00 0.00 3.36
1064 1125 2.786495 TTGCTCCGGCGATCTCTCC 61.786 63.158 9.30 0.00 42.25 3.71
1145 1220 3.771160 CCGCCGTAGAACCTGCCT 61.771 66.667 0.00 0.00 0.00 4.75
1795 1972 1.986413 GCCTTCCTCTTGGCTGAGA 59.014 57.895 9.11 1.12 45.26 3.27
1802 1979 1.449246 CTCCGCAGCCTTCCTCTTG 60.449 63.158 0.00 0.00 0.00 3.02
1903 2131 0.532573 CCACACCACAGTCGCTAGAT 59.467 55.000 0.00 0.00 0.00 1.98
1912 2157 1.179174 TCTCCGAGACCACACCACAG 61.179 60.000 0.00 0.00 0.00 3.66
1922 2167 1.777101 GCATACTGCATCTCCGAGAC 58.223 55.000 0.00 0.00 44.26 3.36
1965 2210 2.119801 AGCATGACACCAGATTCCAC 57.880 50.000 0.00 0.00 0.00 4.02
2073 2508 7.666063 TCAGGATAATTCAGAGTTGATCAGA 57.334 36.000 0.00 0.00 32.27 3.27
2074 2509 8.728337 TTTCAGGATAATTCAGAGTTGATCAG 57.272 34.615 0.00 0.00 32.27 2.90
2083 2518 9.950496 GGAGCTATTATTTCAGGATAATTCAGA 57.050 33.333 0.00 0.00 34.79 3.27
2084 2519 9.956640 AGGAGCTATTATTTCAGGATAATTCAG 57.043 33.333 0.00 0.00 34.79 3.02
2085 2520 9.730705 CAGGAGCTATTATTTCAGGATAATTCA 57.269 33.333 0.00 0.00 34.79 2.57
2086 2521 9.732130 ACAGGAGCTATTATTTCAGGATAATTC 57.268 33.333 0.00 0.00 34.79 2.17
2089 2524 9.920946 AAAACAGGAGCTATTATTTCAGGATAA 57.079 29.630 0.00 0.00 0.00 1.75
2090 2525 9.920946 AAAAACAGGAGCTATTATTTCAGGATA 57.079 29.630 0.00 0.00 0.00 2.59
2091 2526 8.829373 AAAAACAGGAGCTATTATTTCAGGAT 57.171 30.769 0.00 0.00 0.00 3.24
2117 2552 9.577110 GCAATTGTGAAGATTTTCAGATATCAA 57.423 29.630 7.40 0.72 43.66 2.57
2118 2553 7.911727 CGCAATTGTGAAGATTTTCAGATATCA 59.088 33.333 13.88 0.00 43.66 2.15
2119 2554 7.377928 CCGCAATTGTGAAGATTTTCAGATATC 59.622 37.037 20.47 0.00 43.66 1.63
2120 2555 7.148018 ACCGCAATTGTGAAGATTTTCAGATAT 60.148 33.333 20.47 0.00 43.66 1.63
2121 2556 6.150976 ACCGCAATTGTGAAGATTTTCAGATA 59.849 34.615 20.47 0.00 43.66 1.98
2122 2557 5.047802 ACCGCAATTGTGAAGATTTTCAGAT 60.048 36.000 20.47 0.00 43.66 2.90
2123 2558 4.278170 ACCGCAATTGTGAAGATTTTCAGA 59.722 37.500 20.47 0.00 43.66 3.27
2124 2559 4.549458 ACCGCAATTGTGAAGATTTTCAG 58.451 39.130 20.47 2.11 43.66 3.02
2125 2560 4.582701 ACCGCAATTGTGAAGATTTTCA 57.417 36.364 20.47 0.00 40.92 2.69
2126 2561 6.806249 TCAATACCGCAATTGTGAAGATTTTC 59.194 34.615 20.47 0.00 37.94 2.29
2127 2562 6.686630 TCAATACCGCAATTGTGAAGATTTT 58.313 32.000 20.47 2.82 37.94 1.82
2128 2563 6.266168 TCAATACCGCAATTGTGAAGATTT 57.734 33.333 20.47 4.11 37.94 2.17
2129 2564 5.163622 CCTCAATACCGCAATTGTGAAGATT 60.164 40.000 20.47 12.49 37.94 2.40
2130 2565 4.336433 CCTCAATACCGCAATTGTGAAGAT 59.664 41.667 20.47 7.39 37.94 2.40
2131 2566 3.689161 CCTCAATACCGCAATTGTGAAGA 59.311 43.478 20.47 9.02 37.94 2.87
2132 2567 3.440173 ACCTCAATACCGCAATTGTGAAG 59.560 43.478 20.47 7.11 37.94 3.02
2133 2568 3.190327 CACCTCAATACCGCAATTGTGAA 59.810 43.478 20.47 8.39 37.94 3.18
2134 2569 2.746904 CACCTCAATACCGCAATTGTGA 59.253 45.455 20.47 7.24 37.94 3.58
2135 2570 2.487762 ACACCTCAATACCGCAATTGTG 59.512 45.455 12.16 12.16 37.94 3.33
2136 2571 2.487762 CACACCTCAATACCGCAATTGT 59.512 45.455 7.40 0.00 37.94 2.71
2137 2572 2.159393 CCACACCTCAATACCGCAATTG 60.159 50.000 0.00 0.00 38.05 2.32
2138 2573 2.091541 CCACACCTCAATACCGCAATT 58.908 47.619 0.00 0.00 0.00 2.32
2139 2574 1.004277 ACCACACCTCAATACCGCAAT 59.996 47.619 0.00 0.00 0.00 3.56
2140 2575 0.398696 ACCACACCTCAATACCGCAA 59.601 50.000 0.00 0.00 0.00 4.85
2141 2576 0.036765 GACCACACCTCAATACCGCA 60.037 55.000 0.00 0.00 0.00 5.69
2142 2577 0.249398 AGACCACACCTCAATACCGC 59.751 55.000 0.00 0.00 0.00 5.68
2143 2578 2.346803 CAAGACCACACCTCAATACCG 58.653 52.381 0.00 0.00 0.00 4.02
2144 2579 2.304761 TCCAAGACCACACCTCAATACC 59.695 50.000 0.00 0.00 0.00 2.73
2145 2580 3.260884 TCTCCAAGACCACACCTCAATAC 59.739 47.826 0.00 0.00 0.00 1.89
2146 2581 3.516586 TCTCCAAGACCACACCTCAATA 58.483 45.455 0.00 0.00 0.00 1.90
2147 2582 2.338809 TCTCCAAGACCACACCTCAAT 58.661 47.619 0.00 0.00 0.00 2.57
2148 2583 1.801242 TCTCCAAGACCACACCTCAA 58.199 50.000 0.00 0.00 0.00 3.02
2149 2584 1.625315 CATCTCCAAGACCACACCTCA 59.375 52.381 0.00 0.00 0.00 3.86
2150 2585 1.625818 ACATCTCCAAGACCACACCTC 59.374 52.381 0.00 0.00 0.00 3.85
2151 2586 1.734655 ACATCTCCAAGACCACACCT 58.265 50.000 0.00 0.00 0.00 4.00
2152 2587 2.568623 AACATCTCCAAGACCACACC 57.431 50.000 0.00 0.00 0.00 4.16
2153 2588 3.476552 TGAAACATCTCCAAGACCACAC 58.523 45.455 0.00 0.00 0.00 3.82
2154 2589 3.855255 TGAAACATCTCCAAGACCACA 57.145 42.857 0.00 0.00 0.00 4.17
2155 2590 5.712152 AAATGAAACATCTCCAAGACCAC 57.288 39.130 0.00 0.00 0.00 4.16
2156 2591 8.421249 AAATAAATGAAACATCTCCAAGACCA 57.579 30.769 0.00 0.00 0.00 4.02
2157 2592 8.743714 AGAAATAAATGAAACATCTCCAAGACC 58.256 33.333 0.00 0.00 0.00 3.85
2158 2593 9.780413 GAGAAATAAATGAAACATCTCCAAGAC 57.220 33.333 0.00 0.00 0.00 3.01
2159 2594 9.745018 AGAGAAATAAATGAAACATCTCCAAGA 57.255 29.630 0.00 0.00 33.92 3.02
2179 2614 9.964354 TGAAGGATTTGATTCAGATAAGAGAAA 57.036 29.630 0.00 0.00 31.93 2.52
2180 2615 9.964354 TTGAAGGATTTGATTCAGATAAGAGAA 57.036 29.630 0.00 0.00 36.81 2.87
2181 2616 9.610705 CTTGAAGGATTTGATTCAGATAAGAGA 57.389 33.333 0.00 0.00 36.81 3.10
2182 2617 8.344098 GCTTGAAGGATTTGATTCAGATAAGAG 58.656 37.037 0.00 0.00 36.81 2.85
2183 2618 7.830697 TGCTTGAAGGATTTGATTCAGATAAGA 59.169 33.333 0.00 0.00 36.81 2.10
2184 2619 7.993101 TGCTTGAAGGATTTGATTCAGATAAG 58.007 34.615 0.00 0.00 36.81 1.73
2185 2620 7.943079 TGCTTGAAGGATTTGATTCAGATAA 57.057 32.000 0.00 0.00 36.81 1.75
2186 2621 7.041576 CGATGCTTGAAGGATTTGATTCAGATA 60.042 37.037 0.00 0.00 36.81 1.98
2187 2622 6.238676 CGATGCTTGAAGGATTTGATTCAGAT 60.239 38.462 0.00 0.00 36.81 2.90
2188 2623 5.065602 CGATGCTTGAAGGATTTGATTCAGA 59.934 40.000 0.00 0.00 36.81 3.27
2189 2624 5.163683 ACGATGCTTGAAGGATTTGATTCAG 60.164 40.000 0.00 0.00 36.81 3.02
2190 2625 4.701651 ACGATGCTTGAAGGATTTGATTCA 59.298 37.500 0.00 0.00 33.73 2.57
2191 2626 5.065731 AGACGATGCTTGAAGGATTTGATTC 59.934 40.000 0.00 0.00 0.00 2.52
2192 2627 4.946157 AGACGATGCTTGAAGGATTTGATT 59.054 37.500 0.00 0.00 0.00 2.57
2193 2628 4.521146 AGACGATGCTTGAAGGATTTGAT 58.479 39.130 0.00 0.00 0.00 2.57
2194 2629 3.942829 AGACGATGCTTGAAGGATTTGA 58.057 40.909 0.00 0.00 0.00 2.69
2195 2630 4.691860 AAGACGATGCTTGAAGGATTTG 57.308 40.909 0.00 0.00 0.00 2.32
2196 2631 6.115446 TGATAAGACGATGCTTGAAGGATTT 58.885 36.000 0.00 0.00 0.00 2.17
2197 2632 5.674525 TGATAAGACGATGCTTGAAGGATT 58.325 37.500 0.00 0.00 0.00 3.01
2198 2633 5.282055 TGATAAGACGATGCTTGAAGGAT 57.718 39.130 0.00 0.00 0.00 3.24
2199 2634 4.736126 TGATAAGACGATGCTTGAAGGA 57.264 40.909 0.00 0.00 0.00 3.36
2200 2635 4.034510 GGTTGATAAGACGATGCTTGAAGG 59.965 45.833 0.00 0.00 0.00 3.46
2201 2636 4.034510 GGGTTGATAAGACGATGCTTGAAG 59.965 45.833 0.00 0.00 0.00 3.02
2202 2637 3.938963 GGGTTGATAAGACGATGCTTGAA 59.061 43.478 0.00 0.00 0.00 2.69
2203 2638 3.197766 AGGGTTGATAAGACGATGCTTGA 59.802 43.478 0.00 0.00 0.00 3.02
2204 2639 3.310774 CAGGGTTGATAAGACGATGCTTG 59.689 47.826 0.00 0.00 0.00 4.01
2205 2640 3.197766 TCAGGGTTGATAAGACGATGCTT 59.802 43.478 0.00 0.00 0.00 3.91
2206 2641 2.766263 TCAGGGTTGATAAGACGATGCT 59.234 45.455 0.00 0.00 0.00 3.79
2207 2642 3.179443 TCAGGGTTGATAAGACGATGC 57.821 47.619 0.00 0.00 0.00 3.91
2208 2643 6.986817 ACTAATTCAGGGTTGATAAGACGATG 59.013 38.462 0.00 0.00 32.27 3.84
2209 2644 7.125792 ACTAATTCAGGGTTGATAAGACGAT 57.874 36.000 0.00 0.00 32.27 3.73
2210 2645 6.540438 ACTAATTCAGGGTTGATAAGACGA 57.460 37.500 0.00 0.00 32.27 4.20
2211 2646 7.926555 ACATACTAATTCAGGGTTGATAAGACG 59.073 37.037 0.00 0.00 32.27 4.18
2212 2647 9.614792 AACATACTAATTCAGGGTTGATAAGAC 57.385 33.333 0.00 0.00 32.27 3.01
2213 2648 9.832445 GAACATACTAATTCAGGGTTGATAAGA 57.168 33.333 0.00 0.00 32.27 2.10
2214 2649 9.838339 AGAACATACTAATTCAGGGTTGATAAG 57.162 33.333 0.00 0.00 32.27 1.73
2216 2651 9.613428 CAAGAACATACTAATTCAGGGTTGATA 57.387 33.333 0.00 0.00 32.27 2.15
2217 2652 8.328758 TCAAGAACATACTAATTCAGGGTTGAT 58.671 33.333 0.00 0.00 32.27 2.57
2218 2653 7.685481 TCAAGAACATACTAATTCAGGGTTGA 58.315 34.615 0.00 0.00 0.00 3.18
2219 2654 7.921786 TCAAGAACATACTAATTCAGGGTTG 57.078 36.000 0.00 0.00 0.00 3.77
2220 2655 8.164070 ACTTCAAGAACATACTAATTCAGGGTT 58.836 33.333 0.00 0.00 0.00 4.11
2221 2656 7.690256 ACTTCAAGAACATACTAATTCAGGGT 58.310 34.615 0.00 0.00 0.00 4.34
2222 2657 9.667107 TTACTTCAAGAACATACTAATTCAGGG 57.333 33.333 0.00 0.00 0.00 4.45
2231 2666 8.974060 TCAGGTTTTTACTTCAAGAACATACT 57.026 30.769 0.00 0.00 33.84 2.12
2234 2669 9.533253 CATTTCAGGTTTTTACTTCAAGAACAT 57.467 29.630 0.00 0.00 33.84 2.71
2235 2670 8.744652 TCATTTCAGGTTTTTACTTCAAGAACA 58.255 29.630 0.00 0.00 33.84 3.18
2236 2671 9.750125 ATCATTTCAGGTTTTTACTTCAAGAAC 57.250 29.630 0.00 0.00 31.91 3.01
2248 2683 9.927081 AGGAACTATCATATCATTTCAGGTTTT 57.073 29.630 0.00 0.00 36.02 2.43
2249 2684 9.347240 CAGGAACTATCATATCATTTCAGGTTT 57.653 33.333 0.00 0.00 36.02 3.27
2250 2685 8.497745 ACAGGAACTATCATATCATTTCAGGTT 58.502 33.333 0.00 0.00 36.02 3.50
2251 2686 8.038862 ACAGGAACTATCATATCATTTCAGGT 57.961 34.615 0.00 0.00 36.02 4.00
2252 2687 9.429359 GTACAGGAACTATCATATCATTTCAGG 57.571 37.037 0.00 0.00 36.02 3.86
2254 2689 9.987272 CAGTACAGGAACTATCATATCATTTCA 57.013 33.333 0.00 0.00 36.02 2.69
2257 2692 9.593565 TCTCAGTACAGGAACTATCATATCATT 57.406 33.333 0.00 0.00 36.02 2.57
2258 2693 9.766754 ATCTCAGTACAGGAACTATCATATCAT 57.233 33.333 0.00 0.00 36.02 2.45
2259 2694 9.237187 GATCTCAGTACAGGAACTATCATATCA 57.763 37.037 0.00 0.00 36.02 2.15
2260 2695 9.461312 AGATCTCAGTACAGGAACTATCATATC 57.539 37.037 0.00 0.00 36.02 1.63
2261 2696 9.241919 CAGATCTCAGTACAGGAACTATCATAT 57.758 37.037 0.00 0.00 36.02 1.78
2262 2697 8.440771 TCAGATCTCAGTACAGGAACTATCATA 58.559 37.037 0.00 0.00 36.02 2.15
2263 2698 7.293828 TCAGATCTCAGTACAGGAACTATCAT 58.706 38.462 0.00 0.00 36.02 2.45
2264 2699 6.663734 TCAGATCTCAGTACAGGAACTATCA 58.336 40.000 0.00 0.00 36.02 2.15
2265 2700 7.575414 TTCAGATCTCAGTACAGGAACTATC 57.425 40.000 0.00 0.00 36.02 2.08
2266 2701 7.962995 TTTCAGATCTCAGTACAGGAACTAT 57.037 36.000 0.00 0.00 36.02 2.12
2267 2702 7.776618 TTTTCAGATCTCAGTACAGGAACTA 57.223 36.000 0.00 0.00 36.02 2.24
2268 2703 6.672266 TTTTCAGATCTCAGTACAGGAACT 57.328 37.500 0.00 0.00 43.88 3.01
2269 2704 6.876257 ACATTTTCAGATCTCAGTACAGGAAC 59.124 38.462 0.00 0.00 0.00 3.62
2270 2705 7.009179 ACATTTTCAGATCTCAGTACAGGAA 57.991 36.000 0.00 0.00 0.00 3.36
2271 2706 6.611613 ACATTTTCAGATCTCAGTACAGGA 57.388 37.500 0.00 0.00 0.00 3.86
2272 2707 6.875726 TGAACATTTTCAGATCTCAGTACAGG 59.124 38.462 0.00 0.00 36.79 4.00
2273 2708 7.895975 TGAACATTTTCAGATCTCAGTACAG 57.104 36.000 0.00 0.00 36.79 2.74
2274 2709 8.724229 CATTGAACATTTTCAGATCTCAGTACA 58.276 33.333 0.00 0.00 42.79 2.90
2275 2710 7.695618 GCATTGAACATTTTCAGATCTCAGTAC 59.304 37.037 0.00 0.00 42.79 2.73
2276 2711 7.609146 AGCATTGAACATTTTCAGATCTCAGTA 59.391 33.333 0.00 0.00 42.79 2.74
2277 2712 6.433404 AGCATTGAACATTTTCAGATCTCAGT 59.567 34.615 0.00 0.00 42.79 3.41
2278 2713 6.747739 CAGCATTGAACATTTTCAGATCTCAG 59.252 38.462 0.00 0.00 42.79 3.35
2279 2714 6.208007 ACAGCATTGAACATTTTCAGATCTCA 59.792 34.615 0.00 0.00 42.79 3.27
2280 2715 6.618811 ACAGCATTGAACATTTTCAGATCTC 58.381 36.000 0.00 0.00 42.79 2.75
2281 2716 6.585695 ACAGCATTGAACATTTTCAGATCT 57.414 33.333 0.00 0.00 42.79 2.75
2282 2717 7.597743 AGAAACAGCATTGAACATTTTCAGATC 59.402 33.333 0.00 0.00 42.79 2.75
2283 2718 7.439381 AGAAACAGCATTGAACATTTTCAGAT 58.561 30.769 0.00 0.00 42.79 2.90
2284 2719 6.808829 AGAAACAGCATTGAACATTTTCAGA 58.191 32.000 0.00 0.00 42.79 3.27
2285 2720 6.698329 TGAGAAACAGCATTGAACATTTTCAG 59.302 34.615 0.00 0.00 42.79 3.02
2286 2721 6.476380 GTGAGAAACAGCATTGAACATTTTCA 59.524 34.615 0.00 0.00 40.14 2.69
2287 2722 6.476380 TGTGAGAAACAGCATTGAACATTTTC 59.524 34.615 0.00 0.00 33.78 2.29
2288 2723 6.339730 TGTGAGAAACAGCATTGAACATTTT 58.660 32.000 0.00 0.00 33.78 1.82
2289 2724 5.904941 TGTGAGAAACAGCATTGAACATTT 58.095 33.333 0.00 0.00 33.78 2.32
2290 2725 5.518848 TGTGAGAAACAGCATTGAACATT 57.481 34.783 0.00 0.00 33.78 2.71
2291 2726 5.717078 ATGTGAGAAACAGCATTGAACAT 57.283 34.783 0.00 0.00 43.64 2.71
2292 2727 5.518848 AATGTGAGAAACAGCATTGAACA 57.481 34.783 0.00 0.00 43.64 3.18
2293 2728 6.256321 ACAAAATGTGAGAAACAGCATTGAAC 59.744 34.615 0.00 0.00 43.64 3.18
2294 2729 6.339730 ACAAAATGTGAGAAACAGCATTGAA 58.660 32.000 0.00 0.00 43.64 2.69
2295 2730 5.904941 ACAAAATGTGAGAAACAGCATTGA 58.095 33.333 0.00 0.00 43.64 2.57
2296 2731 6.592798 AACAAAATGTGAGAAACAGCATTG 57.407 33.333 0.00 0.00 43.64 2.82
2297 2732 8.891671 ATAAACAAAATGTGAGAAACAGCATT 57.108 26.923 0.00 0.00 43.64 3.56
2298 2733 8.143193 TGATAAACAAAATGTGAGAAACAGCAT 58.857 29.630 0.00 0.00 43.64 3.79
2299 2734 7.487484 TGATAAACAAAATGTGAGAAACAGCA 58.513 30.769 0.00 0.00 43.64 4.41
2300 2735 7.649306 ACTGATAAACAAAATGTGAGAAACAGC 59.351 33.333 0.00 0.00 43.64 4.40
2301 2736 9.520204 AACTGATAAACAAAATGTGAGAAACAG 57.480 29.630 0.00 0.00 43.64 3.16
2302 2737 9.515020 GAACTGATAAACAAAATGTGAGAAACA 57.485 29.630 0.00 0.00 44.79 2.83
2303 2738 9.515020 TGAACTGATAAACAAAATGTGAGAAAC 57.485 29.630 0.00 0.00 0.00 2.78
2304 2739 9.734620 CTGAACTGATAAACAAAATGTGAGAAA 57.265 29.630 0.00 0.00 0.00 2.52
2305 2740 8.902806 ACTGAACTGATAAACAAAATGTGAGAA 58.097 29.630 0.00 0.00 0.00 2.87
2306 2741 8.450578 ACTGAACTGATAAACAAAATGTGAGA 57.549 30.769 0.00 0.00 0.00 3.27
2307 2742 8.961092 CAACTGAACTGATAAACAAAATGTGAG 58.039 33.333 0.00 0.00 0.00 3.51
2308 2743 8.681806 TCAACTGAACTGATAAACAAAATGTGA 58.318 29.630 0.00 0.00 0.00 3.58
2309 2744 8.854979 TCAACTGAACTGATAAACAAAATGTG 57.145 30.769 0.00 0.00 0.00 3.21
2310 2745 9.520204 CTTCAACTGAACTGATAAACAAAATGT 57.480 29.630 0.00 0.00 0.00 2.71
2311 2746 8.482429 GCTTCAACTGAACTGATAAACAAAATG 58.518 33.333 0.00 0.00 0.00 2.32
2312 2747 8.416329 AGCTTCAACTGAACTGATAAACAAAAT 58.584 29.630 0.00 0.00 0.00 1.82
2313 2748 7.771183 AGCTTCAACTGAACTGATAAACAAAA 58.229 30.769 0.00 0.00 0.00 2.44
2314 2749 7.333528 AGCTTCAACTGAACTGATAAACAAA 57.666 32.000 0.00 0.00 0.00 2.83
2315 2750 6.942532 AGCTTCAACTGAACTGATAAACAA 57.057 33.333 0.00 0.00 0.00 2.83
2316 2751 8.097038 AGATAGCTTCAACTGAACTGATAAACA 58.903 33.333 0.00 0.00 0.00 2.83
2317 2752 8.485976 AGATAGCTTCAACTGAACTGATAAAC 57.514 34.615 0.00 0.00 0.00 2.01
2318 2753 8.939929 CAAGATAGCTTCAACTGAACTGATAAA 58.060 33.333 0.00 0.00 30.14 1.40
2319 2754 8.097038 ACAAGATAGCTTCAACTGAACTGATAA 58.903 33.333 0.00 0.00 30.14 1.75
2320 2755 7.547019 CACAAGATAGCTTCAACTGAACTGATA 59.453 37.037 0.00 0.00 30.14 2.15
2321 2756 6.370994 CACAAGATAGCTTCAACTGAACTGAT 59.629 38.462 0.00 0.00 30.14 2.90
2322 2757 5.698089 CACAAGATAGCTTCAACTGAACTGA 59.302 40.000 0.00 0.00 30.14 3.41
2323 2758 5.698089 TCACAAGATAGCTTCAACTGAACTG 59.302 40.000 0.00 0.00 30.14 3.16
2324 2759 5.858381 TCACAAGATAGCTTCAACTGAACT 58.142 37.500 0.00 0.00 30.14 3.01
2325 2760 6.545504 TTCACAAGATAGCTTCAACTGAAC 57.454 37.500 0.00 0.00 30.14 3.18
2326 2761 7.587629 CAATTCACAAGATAGCTTCAACTGAA 58.412 34.615 0.00 0.00 30.14 3.02
2327 2762 6.348786 GCAATTCACAAGATAGCTTCAACTGA 60.349 38.462 0.00 0.00 30.14 3.41
2328 2763 5.798934 GCAATTCACAAGATAGCTTCAACTG 59.201 40.000 0.00 0.00 30.14 3.16
2329 2764 5.474532 TGCAATTCACAAGATAGCTTCAACT 59.525 36.000 0.00 0.00 30.14 3.16
2330 2765 5.702865 TGCAATTCACAAGATAGCTTCAAC 58.297 37.500 0.00 0.00 30.14 3.18
2331 2766 5.963176 TGCAATTCACAAGATAGCTTCAA 57.037 34.783 0.00 0.00 30.14 2.69
2332 2767 5.963176 TTGCAATTCACAAGATAGCTTCA 57.037 34.783 0.00 0.00 30.14 3.02
2333 2768 7.543172 TCATTTTGCAATTCACAAGATAGCTTC 59.457 33.333 0.00 0.00 30.14 3.86
2334 2769 7.380536 TCATTTTGCAATTCACAAGATAGCTT 58.619 30.769 0.00 0.00 33.74 3.74
2335 2770 6.927416 TCATTTTGCAATTCACAAGATAGCT 58.073 32.000 0.00 0.00 0.00 3.32
2336 2771 7.585286 TTCATTTTGCAATTCACAAGATAGC 57.415 32.000 0.00 0.00 0.00 2.97
2338 2773 9.708092 TGAATTCATTTTGCAATTCACAAGATA 57.292 25.926 3.38 0.00 41.80 1.98
2339 2774 8.610248 TGAATTCATTTTGCAATTCACAAGAT 57.390 26.923 3.38 0.00 41.80 2.40
2340 2775 8.434733 TTGAATTCATTTTGCAATTCACAAGA 57.565 26.923 9.40 0.00 44.77 3.02
2341 2776 9.672086 ATTTGAATTCATTTTGCAATTCACAAG 57.328 25.926 9.40 0.00 44.77 3.16
2342 2777 9.452065 CATTTGAATTCATTTTGCAATTCACAA 57.548 25.926 9.40 8.46 44.77 3.33
2343 2778 7.591795 GCATTTGAATTCATTTTGCAATTCACA 59.408 29.630 22.68 5.26 44.77 3.58
2344 2779 7.591795 TGCATTTGAATTCATTTTGCAATTCAC 59.408 29.630 25.69 9.95 44.77 3.18
2345 2780 7.649057 TGCATTTGAATTCATTTTGCAATTCA 58.351 26.923 25.69 13.84 43.88 2.57
2346 2781 8.421701 GTTGCATTTGAATTCATTTTGCAATTC 58.578 29.630 32.74 24.56 42.07 2.17
2347 2782 7.113684 CGTTGCATTTGAATTCATTTTGCAATT 59.886 29.630 32.74 8.65 42.07 2.32
2348 2783 6.579292 CGTTGCATTTGAATTCATTTTGCAAT 59.421 30.769 32.74 19.11 42.07 3.56
2349 2784 5.907945 CGTTGCATTTGAATTCATTTTGCAA 59.092 32.000 29.84 29.84 40.10 4.08
2350 2785 5.441543 CGTTGCATTTGAATTCATTTTGCA 58.558 33.333 24.81 24.81 35.24 4.08
2351 2786 4.318854 GCGTTGCATTTGAATTCATTTTGC 59.681 37.500 21.62 21.62 0.00 3.68
2352 2787 4.847217 GGCGTTGCATTTGAATTCATTTTG 59.153 37.500 9.40 8.47 0.00 2.44
2353 2788 4.083377 GGGCGTTGCATTTGAATTCATTTT 60.083 37.500 9.40 0.00 0.00 1.82
2354 2789 3.436359 GGGCGTTGCATTTGAATTCATTT 59.564 39.130 9.40 0.00 0.00 2.32
2355 2790 3.002102 GGGCGTTGCATTTGAATTCATT 58.998 40.909 9.40 0.00 0.00 2.57
2356 2791 2.028294 TGGGCGTTGCATTTGAATTCAT 60.028 40.909 9.40 0.00 0.00 2.57
2357 2792 1.342496 TGGGCGTTGCATTTGAATTCA 59.658 42.857 3.38 3.38 0.00 2.57
2358 2793 2.077413 TGGGCGTTGCATTTGAATTC 57.923 45.000 0.00 0.00 0.00 2.17
2359 2794 2.540265 TTGGGCGTTGCATTTGAATT 57.460 40.000 0.00 0.00 0.00 2.17
2360 2795 2.234414 AGATTGGGCGTTGCATTTGAAT 59.766 40.909 0.00 0.00 0.00 2.57
2361 2796 1.617850 AGATTGGGCGTTGCATTTGAA 59.382 42.857 0.00 0.00 0.00 2.69
2362 2797 1.255882 AGATTGGGCGTTGCATTTGA 58.744 45.000 0.00 0.00 0.00 2.69
2363 2798 2.937469 TAGATTGGGCGTTGCATTTG 57.063 45.000 0.00 0.00 0.00 2.32
2364 2799 3.195396 ACAATAGATTGGGCGTTGCATTT 59.805 39.130 7.16 0.00 41.96 2.32
2365 2800 2.760092 ACAATAGATTGGGCGTTGCATT 59.240 40.909 7.16 0.00 41.96 3.56
2366 2801 2.378038 ACAATAGATTGGGCGTTGCAT 58.622 42.857 7.16 0.00 41.96 3.96
2367 2802 1.832883 ACAATAGATTGGGCGTTGCA 58.167 45.000 7.16 0.00 41.96 4.08
2368 2803 2.529151 CAACAATAGATTGGGCGTTGC 58.471 47.619 7.16 0.00 41.96 4.17
2369 2804 2.164219 AGCAACAATAGATTGGGCGTTG 59.836 45.455 7.16 0.00 42.85 4.10
2370 2805 2.446435 AGCAACAATAGATTGGGCGTT 58.554 42.857 7.16 0.00 42.85 4.84
2371 2806 2.128771 AGCAACAATAGATTGGGCGT 57.871 45.000 7.16 0.00 42.85 5.68
2372 2807 3.002656 CAGTAGCAACAATAGATTGGGCG 59.997 47.826 7.16 0.00 42.85 6.13
2373 2808 3.316308 CCAGTAGCAACAATAGATTGGGC 59.684 47.826 7.16 9.43 41.96 5.36
2374 2809 3.885297 CCCAGTAGCAACAATAGATTGGG 59.115 47.826 7.16 0.00 41.96 4.12
2375 2810 4.780815 TCCCAGTAGCAACAATAGATTGG 58.219 43.478 7.16 0.00 41.96 3.16
2376 2811 6.204301 CAGATCCCAGTAGCAACAATAGATTG 59.796 42.308 0.61 0.61 43.26 2.67
2377 2812 6.100279 TCAGATCCCAGTAGCAACAATAGATT 59.900 38.462 0.00 0.00 0.00 2.40
2378 2813 5.604231 TCAGATCCCAGTAGCAACAATAGAT 59.396 40.000 0.00 0.00 0.00 1.98
2379 2814 4.962362 TCAGATCCCAGTAGCAACAATAGA 59.038 41.667 0.00 0.00 0.00 1.98
2380 2815 5.282055 TCAGATCCCAGTAGCAACAATAG 57.718 43.478 0.00 0.00 0.00 1.73
2381 2816 5.692115 TTCAGATCCCAGTAGCAACAATA 57.308 39.130 0.00 0.00 0.00 1.90
2382 2817 4.574674 TTCAGATCCCAGTAGCAACAAT 57.425 40.909 0.00 0.00 0.00 2.71
2383 2818 4.365514 TTTCAGATCCCAGTAGCAACAA 57.634 40.909 0.00 0.00 0.00 2.83
2384 2819 4.365514 TTTTCAGATCCCAGTAGCAACA 57.634 40.909 0.00 0.00 0.00 3.33
2385 2820 4.702131 ACATTTTCAGATCCCAGTAGCAAC 59.298 41.667 0.00 0.00 0.00 4.17
2386 2821 4.701651 CACATTTTCAGATCCCAGTAGCAA 59.298 41.667 0.00 0.00 0.00 3.91
2387 2822 4.263462 ACACATTTTCAGATCCCAGTAGCA 60.263 41.667 0.00 0.00 0.00 3.49
2388 2823 4.265073 ACACATTTTCAGATCCCAGTAGC 58.735 43.478 0.00 0.00 0.00 3.58
2389 2824 6.824305 AAACACATTTTCAGATCCCAGTAG 57.176 37.500 0.00 0.00 0.00 2.57
2403 2838 9.442047 TCAAACATAAACAAGGAAAACACATTT 57.558 25.926 0.00 0.00 0.00 2.32
2404 2839 9.612066 ATCAAACATAAACAAGGAAAACACATT 57.388 25.926 0.00 0.00 0.00 2.71
2405 2840 9.044150 CATCAAACATAAACAAGGAAAACACAT 57.956 29.630 0.00 0.00 0.00 3.21
2406 2841 7.010923 GCATCAAACATAAACAAGGAAAACACA 59.989 33.333 0.00 0.00 0.00 3.72
2407 2842 7.224557 AGCATCAAACATAAACAAGGAAAACAC 59.775 33.333 0.00 0.00 0.00 3.32
2408 2843 7.271511 AGCATCAAACATAAACAAGGAAAACA 58.728 30.769 0.00 0.00 0.00 2.83
2409 2844 7.713764 AGCATCAAACATAAACAAGGAAAAC 57.286 32.000 0.00 0.00 0.00 2.43
2410 2845 8.637986 AGTAGCATCAAACATAAACAAGGAAAA 58.362 29.630 0.00 0.00 0.00 2.29
2411 2846 8.177119 AGTAGCATCAAACATAAACAAGGAAA 57.823 30.769 0.00 0.00 0.00 3.13
2412 2847 7.759489 AGTAGCATCAAACATAAACAAGGAA 57.241 32.000 0.00 0.00 0.00 3.36
2413 2848 7.665559 AGAAGTAGCATCAAACATAAACAAGGA 59.334 33.333 0.00 0.00 0.00 3.36
2414 2849 7.820648 AGAAGTAGCATCAAACATAAACAAGG 58.179 34.615 0.00 0.00 0.00 3.61
2434 2869 9.408648 CTCCCCAAACATAATGTTAATAGAAGT 57.591 33.333 0.00 0.00 40.14 3.01
2435 2870 8.850156 CCTCCCCAAACATAATGTTAATAGAAG 58.150 37.037 0.00 0.00 40.14 2.85
2436 2871 8.340757 ACCTCCCCAAACATAATGTTAATAGAA 58.659 33.333 0.00 0.00 40.14 2.10
2437 2872 7.878495 ACCTCCCCAAACATAATGTTAATAGA 58.122 34.615 0.00 0.00 40.14 1.98
2438 2873 7.041372 CGACCTCCCCAAACATAATGTTAATAG 60.041 40.741 0.00 0.00 40.14 1.73
2439 2874 6.768861 CGACCTCCCCAAACATAATGTTAATA 59.231 38.462 0.00 0.00 40.14 0.98
2440 2875 5.592688 CGACCTCCCCAAACATAATGTTAAT 59.407 40.000 0.00 0.00 40.14 1.40
2441 2876 4.944930 CGACCTCCCCAAACATAATGTTAA 59.055 41.667 0.00 0.00 40.14 2.01
2442 2877 4.225492 TCGACCTCCCCAAACATAATGTTA 59.775 41.667 0.00 0.00 40.14 2.41
2443 2878 3.009695 TCGACCTCCCCAAACATAATGTT 59.990 43.478 0.00 0.00 43.41 2.71
2444 2879 2.574369 TCGACCTCCCCAAACATAATGT 59.426 45.455 0.00 0.00 0.00 2.71
2445 2880 3.275617 TCGACCTCCCCAAACATAATG 57.724 47.619 0.00 0.00 0.00 1.90
2446 2881 3.886123 CTTCGACCTCCCCAAACATAAT 58.114 45.455 0.00 0.00 0.00 1.28
2447 2882 2.617021 GCTTCGACCTCCCCAAACATAA 60.617 50.000 0.00 0.00 0.00 1.90
2448 2883 1.065709 GCTTCGACCTCCCCAAACATA 60.066 52.381 0.00 0.00 0.00 2.29
2449 2884 0.322546 GCTTCGACCTCCCCAAACAT 60.323 55.000 0.00 0.00 0.00 2.71
2450 2885 1.072505 GCTTCGACCTCCCCAAACA 59.927 57.895 0.00 0.00 0.00 2.83
2451 2886 0.322546 ATGCTTCGACCTCCCCAAAC 60.323 55.000 0.00 0.00 0.00 2.93
2452 2887 0.404040 AATGCTTCGACCTCCCCAAA 59.596 50.000 0.00 0.00 0.00 3.28
2453 2888 1.281419 TAATGCTTCGACCTCCCCAA 58.719 50.000 0.00 0.00 0.00 4.12
2454 2889 1.140852 CATAATGCTTCGACCTCCCCA 59.859 52.381 0.00 0.00 0.00 4.96
2455 2890 1.416401 TCATAATGCTTCGACCTCCCC 59.584 52.381 0.00 0.00 0.00 4.81
2456 2891 2.910688 TCATAATGCTTCGACCTCCC 57.089 50.000 0.00 0.00 0.00 4.30
2457 2892 4.380531 TCAATCATAATGCTTCGACCTCC 58.619 43.478 0.00 0.00 0.00 4.30
2458 2893 4.450419 CCTCAATCATAATGCTTCGACCTC 59.550 45.833 0.00 0.00 0.00 3.85
2459 2894 4.141620 ACCTCAATCATAATGCTTCGACCT 60.142 41.667 0.00 0.00 0.00 3.85
2460 2895 4.024556 CACCTCAATCATAATGCTTCGACC 60.025 45.833 0.00 0.00 0.00 4.79
2461 2896 4.572389 ACACCTCAATCATAATGCTTCGAC 59.428 41.667 0.00 0.00 0.00 4.20
2462 2897 4.571984 CACACCTCAATCATAATGCTTCGA 59.428 41.667 0.00 0.00 0.00 3.71
2463 2898 4.571984 TCACACCTCAATCATAATGCTTCG 59.428 41.667 0.00 0.00 0.00 3.79
2464 2899 6.485984 AGATCACACCTCAATCATAATGCTTC 59.514 38.462 0.00 0.00 0.00 3.86
2465 2900 6.363065 AGATCACACCTCAATCATAATGCTT 58.637 36.000 0.00 0.00 0.00 3.91
2466 2901 5.938279 AGATCACACCTCAATCATAATGCT 58.062 37.500 0.00 0.00 0.00 3.79
2467 2902 6.630444 AAGATCACACCTCAATCATAATGC 57.370 37.500 0.00 0.00 0.00 3.56
2468 2903 8.217131 TCAAAGATCACACCTCAATCATAATG 57.783 34.615 0.00 0.00 0.00 1.90
2469 2904 8.270030 TCTCAAAGATCACACCTCAATCATAAT 58.730 33.333 0.00 0.00 0.00 1.28
2470 2905 7.623630 TCTCAAAGATCACACCTCAATCATAA 58.376 34.615 0.00 0.00 0.00 1.90
2471 2906 7.186570 TCTCAAAGATCACACCTCAATCATA 57.813 36.000 0.00 0.00 0.00 2.15
2472 2907 6.058553 TCTCAAAGATCACACCTCAATCAT 57.941 37.500 0.00 0.00 0.00 2.45
2473 2908 5.488262 TCTCAAAGATCACACCTCAATCA 57.512 39.130 0.00 0.00 0.00 2.57
2474 2909 5.220815 GCATCTCAAAGATCACACCTCAATC 60.221 44.000 0.00 0.00 31.32 2.67
2475 2910 4.639310 GCATCTCAAAGATCACACCTCAAT 59.361 41.667 0.00 0.00 31.32 2.57
2476 2911 4.005650 GCATCTCAAAGATCACACCTCAA 58.994 43.478 0.00 0.00 31.32 3.02
2477 2912 3.008266 TGCATCTCAAAGATCACACCTCA 59.992 43.478 0.00 0.00 31.32 3.86
2478 2913 3.603532 TGCATCTCAAAGATCACACCTC 58.396 45.455 0.00 0.00 31.32 3.85
2479 2914 3.008813 ACTGCATCTCAAAGATCACACCT 59.991 43.478 0.00 0.00 31.32 4.00
2480 2915 3.126514 CACTGCATCTCAAAGATCACACC 59.873 47.826 0.00 0.00 31.32 4.16
2481 2916 3.750130 ACACTGCATCTCAAAGATCACAC 59.250 43.478 0.00 0.00 31.32 3.82
2482 2917 3.749609 CACACTGCATCTCAAAGATCACA 59.250 43.478 0.00 0.00 31.32 3.58
2483 2918 3.750130 ACACACTGCATCTCAAAGATCAC 59.250 43.478 0.00 0.00 31.32 3.06
2484 2919 4.011966 ACACACTGCATCTCAAAGATCA 57.988 40.909 0.00 0.00 31.32 2.92
2485 2920 5.152097 CAAACACACTGCATCTCAAAGATC 58.848 41.667 0.00 0.00 31.32 2.75
2486 2921 4.581824 ACAAACACACTGCATCTCAAAGAT 59.418 37.500 0.00 0.00 34.74 2.40
2487 2922 3.947196 ACAAACACACTGCATCTCAAAGA 59.053 39.130 0.00 0.00 0.00 2.52
2488 2923 4.285292 GACAAACACACTGCATCTCAAAG 58.715 43.478 0.00 0.00 0.00 2.77
2489 2924 3.242706 CGACAAACACACTGCATCTCAAA 60.243 43.478 0.00 0.00 0.00 2.69
2490 2925 2.287644 CGACAAACACACTGCATCTCAA 59.712 45.455 0.00 0.00 0.00 3.02
2491 2926 1.866601 CGACAAACACACTGCATCTCA 59.133 47.619 0.00 0.00 0.00 3.27
2492 2927 2.135139 TCGACAAACACACTGCATCTC 58.865 47.619 0.00 0.00 0.00 2.75
2493 2928 2.238942 TCGACAAACACACTGCATCT 57.761 45.000 0.00 0.00 0.00 2.90
2494 2929 3.228749 CATTCGACAAACACACTGCATC 58.771 45.455 0.00 0.00 0.00 3.91
2495 2930 2.605338 GCATTCGACAAACACACTGCAT 60.605 45.455 0.00 0.00 0.00 3.96
2496 2931 1.268488 GCATTCGACAAACACACTGCA 60.268 47.619 0.00 0.00 0.00 4.41
2497 2932 1.002468 AGCATTCGACAAACACACTGC 60.002 47.619 0.00 0.00 0.00 4.40
2498 2933 2.602933 CCAGCATTCGACAAACACACTG 60.603 50.000 0.00 0.00 0.00 3.66
2499 2934 1.603802 CCAGCATTCGACAAACACACT 59.396 47.619 0.00 0.00 0.00 3.55
2500 2935 1.601903 TCCAGCATTCGACAAACACAC 59.398 47.619 0.00 0.00 0.00 3.82
2501 2936 1.960417 TCCAGCATTCGACAAACACA 58.040 45.000 0.00 0.00 0.00 3.72
2502 2937 3.058293 TCATTCCAGCATTCGACAAACAC 60.058 43.478 0.00 0.00 0.00 3.32
2503 2938 3.145286 TCATTCCAGCATTCGACAAACA 58.855 40.909 0.00 0.00 0.00 2.83
2504 2939 3.829886 TCATTCCAGCATTCGACAAAC 57.170 42.857 0.00 0.00 0.00 2.93
2505 2940 4.844998 TTTCATTCCAGCATTCGACAAA 57.155 36.364 0.00 0.00 0.00 2.83
2506 2941 4.278170 ACTTTTCATTCCAGCATTCGACAA 59.722 37.500 0.00 0.00 0.00 3.18
2507 2942 3.820467 ACTTTTCATTCCAGCATTCGACA 59.180 39.130 0.00 0.00 0.00 4.35
2508 2943 4.425577 ACTTTTCATTCCAGCATTCGAC 57.574 40.909 0.00 0.00 0.00 4.20
2509 2944 6.150976 ACATTACTTTTCATTCCAGCATTCGA 59.849 34.615 0.00 0.00 0.00 3.71
2510 2945 6.324819 ACATTACTTTTCATTCCAGCATTCG 58.675 36.000 0.00 0.00 0.00 3.34
2511 2946 7.315142 TGACATTACTTTTCATTCCAGCATTC 58.685 34.615 0.00 0.00 0.00 2.67
2512 2947 7.230849 TGACATTACTTTTCATTCCAGCATT 57.769 32.000 0.00 0.00 0.00 3.56
2513 2948 6.839124 TGACATTACTTTTCATTCCAGCAT 57.161 33.333 0.00 0.00 0.00 3.79
2514 2949 6.209192 ACATGACATTACTTTTCATTCCAGCA 59.791 34.615 0.00 0.00 0.00 4.41
2515 2950 6.624423 ACATGACATTACTTTTCATTCCAGC 58.376 36.000 0.00 0.00 0.00 4.85
2516 2951 9.132521 GAAACATGACATTACTTTTCATTCCAG 57.867 33.333 0.00 0.00 0.00 3.86
2517 2952 8.859090 AGAAACATGACATTACTTTTCATTCCA 58.141 29.630 0.00 0.00 0.00 3.53
2518 2953 9.696917 AAGAAACATGACATTACTTTTCATTCC 57.303 29.630 0.00 0.00 0.00 3.01
2548 2983 8.843308 TTTTTGGAGGGATTTGATTCAGATAT 57.157 30.769 0.00 0.00 0.00 1.63
2552 2987 8.480501 ACATATTTTTGGAGGGATTTGATTCAG 58.519 33.333 0.00 0.00 0.00 3.02
2575 3010 9.347240 CAGGATATTTTAGGTTTGATCAGACAT 57.653 33.333 17.33 13.15 0.00 3.06
2576 3011 8.548025 TCAGGATATTTTAGGTTTGATCAGACA 58.452 33.333 17.33 0.00 0.00 3.41
2577 3012 8.964476 TCAGGATATTTTAGGTTTGATCAGAC 57.036 34.615 7.85 7.85 0.00 3.51
2677 3248 2.427232 ATGAACACACAGCAATGCAC 57.573 45.000 8.35 0.00 0.00 4.57
2680 3251 6.384224 ACTATTCAATGAACACACAGCAATG 58.616 36.000 0.00 0.00 0.00 2.82
2697 3268 9.639601 CATGACACTACTTAGTTCAACTATTCA 57.360 33.333 0.00 0.00 33.46 2.57
2698 3269 9.640963 ACATGACACTACTTAGTTCAACTATTC 57.359 33.333 0.00 0.00 33.46 1.75
2699 3270 9.998106 AACATGACACTACTTAGTTCAACTATT 57.002 29.630 0.00 0.00 33.46 1.73
2700 3271 9.998106 AAACATGACACTACTTAGTTCAACTAT 57.002 29.630 0.00 0.00 33.46 2.12
2701 3272 9.472361 GAAACATGACACTACTTAGTTCAACTA 57.528 33.333 0.00 0.00 33.46 2.24
2706 3277 9.262358 AGAAAGAAACATGACACTACTTAGTTC 57.738 33.333 0.00 0.00 33.46 3.01
2739 3310 6.833416 CAGACAATACTTGGGGGATTTGATTA 59.167 38.462 0.00 0.00 34.12 1.75
2751 3322 5.530915 TCAAGGTTGAACAGACAATACTTGG 59.469 40.000 18.55 8.66 41.75 3.61
2863 3591 6.795114 GCATTTGAATTCAGTTTGCAATTCAG 59.205 34.615 23.45 6.93 45.34 3.02
2875 3603 6.821665 AGATTGGGAATTGCATTTGAATTCAG 59.178 34.615 8.41 0.00 40.26 3.02
2908 3636 5.521735 ACACGAGATTTTCATATCTGAGCAC 59.478 40.000 0.00 0.00 35.06 4.40
2913 3641 7.333269 CGAGAAACACGAGATTTTCATATCTG 58.667 38.462 0.00 0.00 35.06 2.90
2937 4254 1.382522 AGTGGCATCAAACATAGGCG 58.617 50.000 0.00 0.00 0.00 5.52
2940 4257 7.549134 TGTTACTAGAAGTGGCATCAAACATAG 59.451 37.037 0.00 0.00 0.00 2.23


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.