Multiple sequence alignment - TraesCS4A01G431700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G431700 chr4A 100.000 2597 0 0 1 2597 702332763 702330167 0.000000e+00 4796.0
1 TraesCS4A01G431700 chr4A 90.836 622 56 1 1 622 500358389 500357769 0.000000e+00 832.0
2 TraesCS4A01G431700 chr4A 92.137 585 44 2 1023 1605 702393610 702394194 0.000000e+00 824.0
3 TraesCS4A01G431700 chr4A 86.895 351 35 9 1370 1714 702375834 702376179 1.460000e-102 383.0
4 TraesCS4A01G431700 chr4A 79.115 407 45 17 631 1006 702375410 702375807 7.180000e-61 244.0
5 TraesCS4A01G431700 chr4A 91.818 110 9 0 618 727 702502214 702502105 1.240000e-33 154.0
6 TraesCS4A01G431700 chr6B 95.462 617 28 0 1 617 619097967 619098583 0.000000e+00 985.0
7 TraesCS4A01G431700 chr6B 90.968 620 56 0 1 620 710073629 710074248 0.000000e+00 835.0
8 TraesCS4A01G431700 chr6B 88.935 479 45 4 2127 2597 76197998 76197520 3.720000e-163 584.0
9 TraesCS4A01G431700 chr6D 94.516 620 34 0 1 620 387397902 387398521 0.000000e+00 957.0
10 TraesCS4A01G431700 chr5D 94.051 622 36 1 1 621 491284837 491285458 0.000000e+00 942.0
11 TraesCS4A01G431700 chr4D 93.548 620 36 2 1 620 504533667 504533052 0.000000e+00 920.0
12 TraesCS4A01G431700 chr1B 93.709 604 37 1 17 620 632978063 632977461 0.000000e+00 904.0
13 TraesCS4A01G431700 chr2B 93.543 604 39 0 9 612 596922072 596922675 0.000000e+00 900.0
14 TraesCS4A01G431700 chr2B 80.682 88 12 5 2119 2203 698970378 698970463 2.160000e-06 63.9
15 TraesCS4A01G431700 chr7D 89.481 713 51 10 1427 2123 28598540 28597836 0.000000e+00 880.0
16 TraesCS4A01G431700 chr7D 89.481 713 51 10 1427 2123 28602746 28602042 0.000000e+00 880.0
17 TraesCS4A01G431700 chr7D 89.481 713 51 10 1427 2123 28648271 28648975 0.000000e+00 880.0
18 TraesCS4A01G431700 chr7D 92.066 605 46 2 1023 1625 28691337 28691941 0.000000e+00 850.0
19 TraesCS4A01G431700 chr7D 86.413 368 36 12 1355 1714 28668934 28669295 8.710000e-105 390.0
20 TraesCS4A01G431700 chr7D 79.524 420 47 17 618 1006 28668440 28668851 1.980000e-66 263.0
21 TraesCS4A01G431700 chr7D 85.603 257 26 6 758 1006 28690994 28691247 2.560000e-65 259.0
22 TraesCS4A01G431700 chr5A 92.220 617 48 0 1 617 216565470 216564854 0.000000e+00 874.0
23 TraesCS4A01G431700 chr7A 91.901 605 47 2 1023 1625 29105490 29106094 0.000000e+00 845.0
24 TraesCS4A01G431700 chr7A 90.800 250 23 0 1355 1604 29022523 29022772 4.140000e-88 335.0
25 TraesCS4A01G431700 chr7A 84.519 239 28 7 756 986 29105134 29105371 7.230000e-56 228.0
26 TraesCS4A01G431700 chr4B 100.000 29 0 0 1753 1781 502994931 502994903 1.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G431700 chr4A 702330167 702332763 2596 True 4796.0 4796 100.0000 1 2597 1 chr4A.!!$R2 2596
1 TraesCS4A01G431700 chr4A 500357769 500358389 620 True 832.0 832 90.8360 1 622 1 chr4A.!!$R1 621
2 TraesCS4A01G431700 chr4A 702393610 702394194 584 False 824.0 824 92.1370 1023 1605 1 chr4A.!!$F1 582
3 TraesCS4A01G431700 chr4A 702375410 702376179 769 False 313.5 383 83.0050 631 1714 2 chr4A.!!$F2 1083
4 TraesCS4A01G431700 chr6B 619097967 619098583 616 False 985.0 985 95.4620 1 617 1 chr6B.!!$F1 616
5 TraesCS4A01G431700 chr6B 710073629 710074248 619 False 835.0 835 90.9680 1 620 1 chr6B.!!$F2 619
6 TraesCS4A01G431700 chr6D 387397902 387398521 619 False 957.0 957 94.5160 1 620 1 chr6D.!!$F1 619
7 TraesCS4A01G431700 chr5D 491284837 491285458 621 False 942.0 942 94.0510 1 621 1 chr5D.!!$F1 620
8 TraesCS4A01G431700 chr4D 504533052 504533667 615 True 920.0 920 93.5480 1 620 1 chr4D.!!$R1 619
9 TraesCS4A01G431700 chr1B 632977461 632978063 602 True 904.0 904 93.7090 17 620 1 chr1B.!!$R1 603
10 TraesCS4A01G431700 chr2B 596922072 596922675 603 False 900.0 900 93.5430 9 612 1 chr2B.!!$F1 603
11 TraesCS4A01G431700 chr7D 28597836 28602746 4910 True 880.0 880 89.4810 1427 2123 2 chr7D.!!$R1 696
12 TraesCS4A01G431700 chr7D 28648271 28648975 704 False 880.0 880 89.4810 1427 2123 1 chr7D.!!$F1 696
13 TraesCS4A01G431700 chr7D 28690994 28691941 947 False 554.5 850 88.8345 758 1625 2 chr7D.!!$F3 867
14 TraesCS4A01G431700 chr7D 28668440 28669295 855 False 326.5 390 82.9685 618 1714 2 chr7D.!!$F2 1096
15 TraesCS4A01G431700 chr5A 216564854 216565470 616 True 874.0 874 92.2200 1 617 1 chr5A.!!$R1 616
16 TraesCS4A01G431700 chr7A 29105134 29106094 960 False 536.5 845 88.2100 756 1625 2 chr7A.!!$F2 869

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
323 324 1.003545 CGGTCAGATTTGCCTATTGCG 60.004 52.381 0.0 0.0 45.6 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1865 6211 0.030504 TGTTTGTCATGGCTTGTGCG 59.969 50.0 0.0 0.0 40.82 5.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
58 59 2.102420 AGATGGCGATCGTTATGGACAA 59.898 45.455 17.81 0.00 31.97 3.18
218 219 3.628942 CGGATGGCAAAATCATCTTCTCA 59.371 43.478 0.00 0.00 40.44 3.27
221 222 3.423749 TGGCAAAATCATCTTCTCAGCA 58.576 40.909 0.00 0.00 0.00 4.41
268 269 3.032265 TGCTCTGGAGGCTGAACTATA 57.968 47.619 0.00 0.00 0.00 1.31
323 324 1.003545 CGGTCAGATTTGCCTATTGCG 60.004 52.381 0.00 0.00 45.60 4.85
380 384 2.743664 CACATGTGATGGTTGTGATCGT 59.256 45.455 21.64 0.00 42.59 3.73
452 456 7.755582 TCGTCAATCTTGTATTACTCATGTG 57.244 36.000 0.00 0.00 0.00 3.21
507 511 2.751806 GCTGCTTTTGGTAGAGCTCAAT 59.248 45.455 17.77 0.00 39.60 2.57
694 698 6.017523 TGTTCTCAATTCGCAAGTGATAAACA 60.018 34.615 15.13 15.13 38.02 2.83
695 699 6.169419 TCTCAATTCGCAAGTGATAAACAG 57.831 37.500 0.75 0.00 34.70 3.16
718 722 9.178758 ACAGAATAACAAATACTGAAATCCCTC 57.821 33.333 0.00 0.00 33.53 4.30
726 730 2.196595 ACTGAAATCCCTCCGATCCAA 58.803 47.619 0.00 0.00 0.00 3.53
729 733 3.380393 TGAAATCCCTCCGATCCAAGTA 58.620 45.455 0.00 0.00 0.00 2.24
731 735 4.141711 TGAAATCCCTCCGATCCAAGTAAG 60.142 45.833 0.00 0.00 0.00 2.34
732 736 2.840640 TCCCTCCGATCCAAGTAAGA 57.159 50.000 0.00 0.00 0.00 2.10
733 737 2.667470 TCCCTCCGATCCAAGTAAGAG 58.333 52.381 0.00 0.00 0.00 2.85
734 738 2.024273 TCCCTCCGATCCAAGTAAGAGT 60.024 50.000 0.00 0.00 0.00 3.24
736 740 3.197983 CCCTCCGATCCAAGTAAGAGTTT 59.802 47.826 0.00 0.00 0.00 2.66
737 741 4.323562 CCCTCCGATCCAAGTAAGAGTTTT 60.324 45.833 0.00 0.00 0.00 2.43
806 832 3.311322 TCATTTCTTCGTGTTTGCTTCGT 59.689 39.130 0.00 0.00 0.00 3.85
828 854 2.969300 TTTCCACCGTCCAGGGTTGC 62.969 60.000 0.00 0.00 46.96 4.17
837 863 4.954970 CAGGGTTGCCGTGCCTGT 62.955 66.667 0.00 0.00 32.63 4.00
838 864 3.246112 AGGGTTGCCGTGCCTGTA 61.246 61.111 0.00 0.00 0.00 2.74
847 873 3.616219 TGCCGTGCCTGTATTTCTTAAT 58.384 40.909 0.00 0.00 0.00 1.40
851 877 5.468746 GCCGTGCCTGTATTTCTTAATCATA 59.531 40.000 0.00 0.00 0.00 2.15
852 878 6.149474 GCCGTGCCTGTATTTCTTAATCATAT 59.851 38.462 0.00 0.00 0.00 1.78
853 879 7.624344 GCCGTGCCTGTATTTCTTAATCATATC 60.624 40.741 0.00 0.00 0.00 1.63
854 880 7.604164 CCGTGCCTGTATTTCTTAATCATATCT 59.396 37.037 0.00 0.00 0.00 1.98
855 881 8.438513 CGTGCCTGTATTTCTTAATCATATCTG 58.561 37.037 0.00 0.00 0.00 2.90
856 882 9.494271 GTGCCTGTATTTCTTAATCATATCTGA 57.506 33.333 0.00 0.00 35.41 3.27
874 912 2.206750 TGATCGTTTATTGCCGCTACC 58.793 47.619 0.00 0.00 0.00 3.18
905 943 3.308866 AGGTTTCGTCAGTTTTTGTCTCG 59.691 43.478 0.00 0.00 0.00 4.04
912 952 3.067106 TCAGTTTTTGTCTCGGCATCTC 58.933 45.455 0.00 0.00 0.00 2.75
961 1006 4.413520 ACAAGGGCATCCACTATATCTGTT 59.586 41.667 0.00 0.00 34.83 3.16
974 1019 8.725148 CCACTATATCTGTTAATTCCTTCATGC 58.275 37.037 0.00 0.00 0.00 4.06
981 1026 2.149973 AATTCCTTCATGCCAGGTCC 57.850 50.000 9.85 0.00 32.59 4.46
1006 1060 2.667470 GTCTCCCTCTAGCCATGTACA 58.333 52.381 0.00 0.00 0.00 2.90
1007 1061 3.235200 GTCTCCCTCTAGCCATGTACAT 58.765 50.000 1.41 1.41 0.00 2.29
1008 1062 3.643792 GTCTCCCTCTAGCCATGTACATT 59.356 47.826 5.37 0.00 0.00 2.71
1010 1064 4.721776 TCTCCCTCTAGCCATGTACATTTT 59.278 41.667 5.37 0.00 0.00 1.82
1014 1068 5.357257 CCTCTAGCCATGTACATTTTACGT 58.643 41.667 5.37 0.00 0.00 3.57
1015 1069 5.234329 CCTCTAGCCATGTACATTTTACGTG 59.766 44.000 5.37 0.00 34.99 4.49
1016 1070 5.726397 TCTAGCCATGTACATTTTACGTGT 58.274 37.500 5.37 0.00 33.76 4.49
1017 1071 4.939509 AGCCATGTACATTTTACGTGTC 57.060 40.909 5.37 0.00 33.76 3.67
1018 1072 4.320023 AGCCATGTACATTTTACGTGTCA 58.680 39.130 5.37 0.00 33.76 3.58
1019 1073 4.941263 AGCCATGTACATTTTACGTGTCAT 59.059 37.500 5.37 0.00 33.76 3.06
1020 1074 5.064707 AGCCATGTACATTTTACGTGTCATC 59.935 40.000 5.37 0.00 33.76 2.92
1021 1075 5.489335 CCATGTACATTTTACGTGTCATCG 58.511 41.667 5.37 0.00 33.76 3.84
1025 1079 2.664568 ACATTTTACGTGTCATCGTCCG 59.335 45.455 0.00 0.00 43.12 4.79
1026 1080 1.062258 TTTTACGTGTCATCGTCCGC 58.938 50.000 0.00 0.00 43.12 5.54
1027 1081 0.733566 TTTACGTGTCATCGTCCGCC 60.734 55.000 0.00 0.00 43.12 6.13
1028 1082 2.546645 TTACGTGTCATCGTCCGCCC 62.547 60.000 0.00 0.00 43.12 6.13
1095 1224 0.538584 TCTTCATCGGCATCTGCACT 59.461 50.000 4.33 0.00 44.36 4.40
1099 1228 0.027194 CATCGGCATCTGCACTTTCG 59.973 55.000 4.33 0.00 44.36 3.46
1106 1235 1.084370 ATCTGCACTTTCGTAGGCGC 61.084 55.000 0.00 0.00 38.14 6.53
1113 1242 1.668101 CTTTCGTAGGCGCCCTCTCT 61.668 60.000 26.15 6.59 38.14 3.10
1155 1284 1.530891 TCCCCGGACGATCCTGATC 60.531 63.158 0.73 0.00 33.30 2.92
1189 1318 0.095245 CACACTATGGCGCTTCAACG 59.905 55.000 7.64 0.00 0.00 4.10
1203 1332 0.377905 TCAACGTGAACTCGACGACA 59.622 50.000 0.00 0.00 39.21 4.35
1259 1388 1.898094 TGTCCGTCTCGAACCCGAA 60.898 57.895 0.18 0.00 45.04 4.30
1319 1448 2.022527 AGGGATTCTACCAGGAAGAGCT 60.023 50.000 0.00 0.00 0.00 4.09
1565 5900 0.464013 CAGCTGATGGAGGCCTCAAG 60.464 60.000 33.29 23.38 0.00 3.02
1611 5956 8.539770 TCAGCTTTTGAATCTACTAGAACTTG 57.460 34.615 0.00 0.00 31.34 3.16
1625 5970 6.056884 ACTAGAACTTGGTATCCTAGACGAG 58.943 44.000 0.00 6.21 33.13 4.18
1652 5997 0.445436 CAGTGCGCTCATCTGGAAAC 59.555 55.000 9.73 0.00 0.00 2.78
1695 6040 2.505982 CATCCTCAACGGCCCGAT 59.494 61.111 11.71 0.00 0.00 4.18
1763 6108 6.474427 TCGGTCATTTCAGTAACTAATAAGCG 59.526 38.462 0.00 0.00 0.00 4.68
1785 6130 2.174107 CATGCAACACACGCCTCG 59.826 61.111 0.00 0.00 0.00 4.63
1786 6131 3.049674 ATGCAACACACGCCTCGG 61.050 61.111 0.00 0.00 0.00 4.63
1795 6140 1.227527 CACGCCTCGGCCAATGATA 60.228 57.895 2.24 0.00 37.98 2.15
1796 6141 0.603707 CACGCCTCGGCCAATGATAT 60.604 55.000 2.24 0.00 37.98 1.63
1843 6189 4.951715 TGGACCAATGATCATTCCAAAGAG 59.048 41.667 20.57 8.44 0.00 2.85
1865 6211 2.232208 ACACCTACTACAAAGCGTACCC 59.768 50.000 0.00 0.00 0.00 3.69
1903 6253 9.897744 GACAAACATGAATTCAAAGATCAACTA 57.102 29.630 13.09 0.00 0.00 2.24
1959 6315 9.936329 ACCTCAATATTTATTATTTGTGACCCT 57.064 29.630 0.00 0.00 0.00 4.34
2032 6388 2.254464 GCCCTTAGCACGCCTATGC 61.254 63.158 0.00 0.00 46.50 3.14
2043 6399 1.153509 GCCTATGCGGTACCGTGTT 60.154 57.895 33.34 20.71 42.09 3.32
2103 6459 5.123820 GGTAACACTAAGCATTGCAGATTCA 59.876 40.000 11.91 0.00 0.00 2.57
2115 6471 9.135189 AGCATTGCAGATTCAAATTATACCTTA 57.865 29.630 11.91 0.00 0.00 2.69
2174 6530 8.847444 TTCGTATTAGAAGTCTAAATCGAACC 57.153 34.615 23.63 5.21 43.44 3.62
2175 6531 7.420800 TCGTATTAGAAGTCTAAATCGAACCC 58.579 38.462 19.09 0.94 41.27 4.11
2176 6532 7.284034 TCGTATTAGAAGTCTAAATCGAACCCT 59.716 37.037 19.09 1.61 41.27 4.34
2177 6533 8.562892 CGTATTAGAAGTCTAAATCGAACCCTA 58.437 37.037 16.24 0.00 41.27 3.53
2180 6536 5.975282 AGAAGTCTAAATCGAACCCTAACC 58.025 41.667 0.00 0.00 0.00 2.85
2181 6537 5.720520 AGAAGTCTAAATCGAACCCTAACCT 59.279 40.000 0.00 0.00 0.00 3.50
2182 6538 5.595257 AGTCTAAATCGAACCCTAACCTC 57.405 43.478 0.00 0.00 0.00 3.85
2183 6539 4.405036 AGTCTAAATCGAACCCTAACCTCC 59.595 45.833 0.00 0.00 0.00 4.30
2184 6540 4.405036 GTCTAAATCGAACCCTAACCTCCT 59.595 45.833 0.00 0.00 0.00 3.69
2185 6541 3.629142 AAATCGAACCCTAACCTCCTG 57.371 47.619 0.00 0.00 0.00 3.86
2186 6542 2.544844 ATCGAACCCTAACCTCCTGA 57.455 50.000 0.00 0.00 0.00 3.86
2187 6543 2.544844 TCGAACCCTAACCTCCTGAT 57.455 50.000 0.00 0.00 0.00 2.90
2188 6544 2.385803 TCGAACCCTAACCTCCTGATC 58.614 52.381 0.00 0.00 0.00 2.92
2189 6545 1.413077 CGAACCCTAACCTCCTGATCC 59.587 57.143 0.00 0.00 0.00 3.36
2190 6546 1.769465 GAACCCTAACCTCCTGATCCC 59.231 57.143 0.00 0.00 0.00 3.85
2191 6547 1.027815 ACCCTAACCTCCTGATCCCT 58.972 55.000 0.00 0.00 0.00 4.20
2192 6548 1.344496 ACCCTAACCTCCTGATCCCTG 60.344 57.143 0.00 0.00 0.00 4.45
2193 6549 1.062121 CCCTAACCTCCTGATCCCTGA 60.062 57.143 0.00 0.00 0.00 3.86
2194 6550 2.629639 CCCTAACCTCCTGATCCCTGAA 60.630 54.545 0.00 0.00 0.00 3.02
2195 6551 3.115390 CCTAACCTCCTGATCCCTGAAA 58.885 50.000 0.00 0.00 0.00 2.69
2196 6552 3.718956 CCTAACCTCCTGATCCCTGAAAT 59.281 47.826 0.00 0.00 0.00 2.17
2197 6553 3.659183 AACCTCCTGATCCCTGAAATG 57.341 47.619 0.00 0.00 0.00 2.32
2198 6554 2.850833 ACCTCCTGATCCCTGAAATGA 58.149 47.619 0.00 0.00 0.00 2.57
2199 6555 2.776536 ACCTCCTGATCCCTGAAATGAG 59.223 50.000 0.00 0.00 0.00 2.90
2200 6556 2.486907 CCTCCTGATCCCTGAAATGAGC 60.487 54.545 0.00 0.00 0.00 4.26
2201 6557 2.172082 CTCCTGATCCCTGAAATGAGCA 59.828 50.000 0.00 0.00 0.00 4.26
2202 6558 2.092753 TCCTGATCCCTGAAATGAGCAC 60.093 50.000 0.00 0.00 0.00 4.40
2203 6559 2.295885 CTGATCCCTGAAATGAGCACC 58.704 52.381 0.00 0.00 0.00 5.01
2204 6560 1.918262 TGATCCCTGAAATGAGCACCT 59.082 47.619 0.00 0.00 0.00 4.00
2205 6561 2.309755 TGATCCCTGAAATGAGCACCTT 59.690 45.455 0.00 0.00 0.00 3.50
2206 6562 2.205022 TCCCTGAAATGAGCACCTTG 57.795 50.000 0.00 0.00 0.00 3.61
2207 6563 1.425066 TCCCTGAAATGAGCACCTTGT 59.575 47.619 0.00 0.00 0.00 3.16
2208 6564 2.642311 TCCCTGAAATGAGCACCTTGTA 59.358 45.455 0.00 0.00 0.00 2.41
2209 6565 3.266772 TCCCTGAAATGAGCACCTTGTAT 59.733 43.478 0.00 0.00 0.00 2.29
2210 6566 4.019174 CCCTGAAATGAGCACCTTGTATT 58.981 43.478 0.00 0.00 0.00 1.89
2211 6567 4.463891 CCCTGAAATGAGCACCTTGTATTT 59.536 41.667 0.00 0.00 0.00 1.40
2212 6568 5.652014 CCCTGAAATGAGCACCTTGTATTTA 59.348 40.000 0.00 0.00 0.00 1.40
2213 6569 6.322201 CCCTGAAATGAGCACCTTGTATTTAT 59.678 38.462 0.00 0.00 0.00 1.40
2214 6570 7.198390 CCTGAAATGAGCACCTTGTATTTATG 58.802 38.462 0.00 0.00 0.00 1.90
2215 6571 7.067372 CCTGAAATGAGCACCTTGTATTTATGA 59.933 37.037 0.00 0.00 0.00 2.15
2216 6572 8.347004 TGAAATGAGCACCTTGTATTTATGAA 57.653 30.769 0.00 0.00 0.00 2.57
2217 6573 8.970020 TGAAATGAGCACCTTGTATTTATGAAT 58.030 29.630 0.00 0.00 0.00 2.57
2218 6574 9.455847 GAAATGAGCACCTTGTATTTATGAATC 57.544 33.333 0.00 0.00 0.00 2.52
2219 6575 6.942532 TGAGCACCTTGTATTTATGAATCC 57.057 37.500 0.00 0.00 0.00 3.01
2220 6576 5.827797 TGAGCACCTTGTATTTATGAATCCC 59.172 40.000 0.00 0.00 0.00 3.85
2221 6577 4.821805 AGCACCTTGTATTTATGAATCCCG 59.178 41.667 0.00 0.00 0.00 5.14
2222 6578 4.023193 GCACCTTGTATTTATGAATCCCGG 60.023 45.833 0.00 0.00 0.00 5.73
2223 6579 4.518970 CACCTTGTATTTATGAATCCCGGG 59.481 45.833 16.85 16.85 0.00 5.73
2224 6580 3.506067 CCTTGTATTTATGAATCCCGGGC 59.494 47.826 18.49 1.66 0.00 6.13
2225 6581 3.866703 TGTATTTATGAATCCCGGGCA 57.133 42.857 18.49 9.05 0.00 5.36
2226 6582 4.380843 TGTATTTATGAATCCCGGGCAT 57.619 40.909 18.49 16.57 0.00 4.40
2227 6583 4.735369 TGTATTTATGAATCCCGGGCATT 58.265 39.130 18.49 16.58 0.00 3.56
2228 6584 4.764823 TGTATTTATGAATCCCGGGCATTC 59.235 41.667 26.31 26.31 0.00 2.67
2229 6585 3.593442 TTTATGAATCCCGGGCATTCT 57.407 42.857 29.72 22.09 32.32 2.40
2230 6586 3.593442 TTATGAATCCCGGGCATTCTT 57.407 42.857 29.72 26.90 32.32 2.52
2231 6587 2.459555 ATGAATCCCGGGCATTCTTT 57.540 45.000 29.72 20.81 32.32 2.52
2232 6588 1.473258 TGAATCCCGGGCATTCTTTG 58.527 50.000 29.72 5.06 32.32 2.77
2248 6604 8.255394 GCATTCTTTGCCTTATATTTGTTTGT 57.745 30.769 0.00 0.00 46.15 2.83
2249 6605 8.382875 GCATTCTTTGCCTTATATTTGTTTGTC 58.617 33.333 0.00 0.00 46.15 3.18
2250 6606 8.586273 CATTCTTTGCCTTATATTTGTTTGTCG 58.414 33.333 0.00 0.00 0.00 4.35
2251 6607 6.090129 TCTTTGCCTTATATTTGTTTGTCGC 58.910 36.000 0.00 0.00 0.00 5.19
2252 6608 4.009798 TGCCTTATATTTGTTTGTCGCG 57.990 40.909 0.00 0.00 0.00 5.87
2253 6609 3.437395 TGCCTTATATTTGTTTGTCGCGT 59.563 39.130 5.77 0.00 0.00 6.01
2254 6610 4.026407 GCCTTATATTTGTTTGTCGCGTC 58.974 43.478 5.77 0.00 0.00 5.19
2255 6611 4.260670 CCTTATATTTGTTTGTCGCGTCG 58.739 43.478 5.77 0.00 0.00 5.12
2256 6612 2.798834 ATATTTGTTTGTCGCGTCGG 57.201 45.000 5.77 0.00 0.00 4.79
2257 6613 0.791422 TATTTGTTTGTCGCGTCGGG 59.209 50.000 5.77 2.31 0.00 5.14
2258 6614 0.881159 ATTTGTTTGTCGCGTCGGGA 60.881 50.000 8.06 8.06 0.00 5.14
2259 6615 1.088340 TTTGTTTGTCGCGTCGGGAA 61.088 50.000 14.10 2.10 0.00 3.97
2260 6616 1.492319 TTGTTTGTCGCGTCGGGAAG 61.492 55.000 14.10 0.00 0.00 3.46
2261 6617 3.039588 TTTGTCGCGTCGGGAAGC 61.040 61.111 14.10 3.30 0.00 3.86
2262 6618 3.793775 TTTGTCGCGTCGGGAAGCA 62.794 57.895 14.10 6.05 35.53 3.91
2272 6628 2.511600 GGGAAGCACACGATCCCG 60.512 66.667 0.00 0.00 43.20 5.14
2273 6629 3.195698 GGAAGCACACGATCCCGC 61.196 66.667 0.00 0.00 39.95 6.13
2274 6630 3.195698 GAAGCACACGATCCCGCC 61.196 66.667 0.00 0.00 39.95 6.13
2275 6631 4.778143 AAGCACACGATCCCGCCC 62.778 66.667 0.00 0.00 39.95 6.13
2288 6644 3.948735 CCGCCCGGGAATATACAAT 57.051 52.632 29.31 0.00 38.47 2.71
2289 6645 2.194201 CCGCCCGGGAATATACAATT 57.806 50.000 29.31 0.00 38.47 2.32
2290 6646 2.081462 CCGCCCGGGAATATACAATTC 58.919 52.381 29.31 0.00 38.47 2.17
2291 6647 2.290071 CCGCCCGGGAATATACAATTCT 60.290 50.000 29.31 0.00 38.47 2.40
2292 6648 3.000727 CGCCCGGGAATATACAATTCTC 58.999 50.000 29.31 0.00 0.00 2.87
2293 6649 3.344515 GCCCGGGAATATACAATTCTCC 58.655 50.000 29.31 0.00 0.00 3.71
2294 6650 3.009143 GCCCGGGAATATACAATTCTCCT 59.991 47.826 29.31 0.00 0.00 3.69
2295 6651 4.579869 CCCGGGAATATACAATTCTCCTG 58.420 47.826 18.48 0.00 33.10 3.86
2296 6652 4.286032 CCCGGGAATATACAATTCTCCTGA 59.714 45.833 18.48 0.00 34.94 3.86
2297 6653 5.238583 CCGGGAATATACAATTCTCCTGAC 58.761 45.833 0.00 0.00 34.94 3.51
2298 6654 5.221641 CCGGGAATATACAATTCTCCTGACA 60.222 44.000 0.00 0.00 34.94 3.58
2299 6655 6.288294 CGGGAATATACAATTCTCCTGACAA 58.712 40.000 0.00 0.00 34.94 3.18
2300 6656 6.936900 CGGGAATATACAATTCTCCTGACAAT 59.063 38.462 0.00 0.00 34.94 2.71
2301 6657 7.445402 CGGGAATATACAATTCTCCTGACAATT 59.555 37.037 0.00 0.00 34.94 2.32
2302 6658 9.136323 GGGAATATACAATTCTCCTGACAATTT 57.864 33.333 0.00 0.00 0.00 1.82
2303 6659 9.956720 GGAATATACAATTCTCCTGACAATTTG 57.043 33.333 0.00 0.00 0.00 2.32
2304 6660 9.956720 GAATATACAATTCTCCTGACAATTTGG 57.043 33.333 0.78 0.00 0.00 3.28
2305 6661 6.780457 ATACAATTCTCCTGACAATTTGGG 57.220 37.500 0.78 0.00 0.00 4.12
2306 6662 3.834231 ACAATTCTCCTGACAATTTGGGG 59.166 43.478 0.78 0.77 0.00 4.96
2307 6663 1.923356 TTCTCCTGACAATTTGGGGC 58.077 50.000 0.78 0.00 0.00 5.80
2308 6664 0.039618 TCTCCTGACAATTTGGGGCC 59.960 55.000 0.00 0.00 0.00 5.80
2309 6665 0.251742 CTCCTGACAATTTGGGGCCA 60.252 55.000 4.39 0.00 0.00 5.36
2310 6666 0.541764 TCCTGACAATTTGGGGCCAC 60.542 55.000 4.39 0.00 0.00 5.01
2311 6667 0.831288 CCTGACAATTTGGGGCCACA 60.831 55.000 1.54 1.54 0.00 4.17
2312 6668 1.269012 CTGACAATTTGGGGCCACAT 58.731 50.000 9.55 0.00 0.00 3.21
2313 6669 0.975135 TGACAATTTGGGGCCACATG 59.025 50.000 9.55 7.12 0.00 3.21
2314 6670 1.265236 GACAATTTGGGGCCACATGA 58.735 50.000 9.55 0.00 0.00 3.07
2315 6671 0.975887 ACAATTTGGGGCCACATGAC 59.024 50.000 9.55 0.00 0.00 3.06
2316 6672 0.975135 CAATTTGGGGCCACATGACA 59.025 50.000 9.55 0.00 0.00 3.58
2317 6673 1.555992 CAATTTGGGGCCACATGACAT 59.444 47.619 9.55 0.00 0.00 3.06
2318 6674 1.488390 ATTTGGGGCCACATGACATC 58.512 50.000 9.55 0.00 0.00 3.06
2319 6675 0.614415 TTTGGGGCCACATGACATCC 60.614 55.000 9.55 0.00 0.00 3.51
2320 6676 1.798087 TTGGGGCCACATGACATCCA 61.798 55.000 9.55 0.00 0.00 3.41
2321 6677 1.231068 GGGGCCACATGACATCCAT 59.769 57.895 4.39 0.00 35.44 3.41
2322 6678 0.825010 GGGGCCACATGACATCCATC 60.825 60.000 4.39 0.00 31.94 3.51
2323 6679 0.184451 GGGCCACATGACATCCATCT 59.816 55.000 4.39 0.00 31.94 2.90
2324 6680 1.410648 GGGCCACATGACATCCATCTT 60.411 52.381 4.39 0.00 31.94 2.40
2325 6681 1.952296 GGCCACATGACATCCATCTTC 59.048 52.381 0.00 0.00 31.94 2.87
2326 6682 2.422519 GGCCACATGACATCCATCTTCT 60.423 50.000 0.00 0.00 31.94 2.85
2327 6683 3.285484 GCCACATGACATCCATCTTCTT 58.715 45.455 0.00 0.00 31.94 2.52
2328 6684 3.314635 GCCACATGACATCCATCTTCTTC 59.685 47.826 0.00 0.00 31.94 2.87
2329 6685 3.881688 CCACATGACATCCATCTTCTTCC 59.118 47.826 0.00 0.00 31.94 3.46
2330 6686 4.384978 CCACATGACATCCATCTTCTTCCT 60.385 45.833 0.00 0.00 31.94 3.36
2331 6687 4.815308 CACATGACATCCATCTTCTTCCTC 59.185 45.833 0.00 0.00 31.94 3.71
2332 6688 3.808466 TGACATCCATCTTCTTCCTCG 57.192 47.619 0.00 0.00 0.00 4.63
2333 6689 3.365472 TGACATCCATCTTCTTCCTCGA 58.635 45.455 0.00 0.00 0.00 4.04
2334 6690 3.963374 TGACATCCATCTTCTTCCTCGAT 59.037 43.478 0.00 0.00 0.00 3.59
2335 6691 4.038522 TGACATCCATCTTCTTCCTCGATC 59.961 45.833 0.00 0.00 0.00 3.69
2336 6692 3.963374 ACATCCATCTTCTTCCTCGATCA 59.037 43.478 0.00 0.00 0.00 2.92
2337 6693 4.406972 ACATCCATCTTCTTCCTCGATCAA 59.593 41.667 0.00 0.00 0.00 2.57
2338 6694 4.392921 TCCATCTTCTTCCTCGATCAAC 57.607 45.455 0.00 0.00 0.00 3.18
2339 6695 4.026744 TCCATCTTCTTCCTCGATCAACT 58.973 43.478 0.00 0.00 0.00 3.16
2340 6696 4.098654 TCCATCTTCTTCCTCGATCAACTC 59.901 45.833 0.00 0.00 0.00 3.01
2341 6697 4.367450 CATCTTCTTCCTCGATCAACTCC 58.633 47.826 0.00 0.00 0.00 3.85
2342 6698 2.423892 TCTTCTTCCTCGATCAACTCCG 59.576 50.000 0.00 0.00 0.00 4.63
2343 6699 0.456221 TCTTCCTCGATCAACTCCGC 59.544 55.000 0.00 0.00 0.00 5.54
2344 6700 0.528684 CTTCCTCGATCAACTCCGCC 60.529 60.000 0.00 0.00 0.00 6.13
2345 6701 1.254975 TTCCTCGATCAACTCCGCCA 61.255 55.000 0.00 0.00 0.00 5.69
2346 6702 1.043116 TCCTCGATCAACTCCGCCAT 61.043 55.000 0.00 0.00 0.00 4.40
2347 6703 0.877649 CCTCGATCAACTCCGCCATG 60.878 60.000 0.00 0.00 0.00 3.66
2348 6704 0.877649 CTCGATCAACTCCGCCATGG 60.878 60.000 7.63 7.63 40.09 3.66
2350 6706 1.154205 CGATCAACTCCGCCATGGAC 61.154 60.000 18.40 5.97 43.74 4.02
2351 6707 0.179000 GATCAACTCCGCCATGGACT 59.821 55.000 18.40 0.00 43.74 3.85
2352 6708 0.179000 ATCAACTCCGCCATGGACTC 59.821 55.000 18.40 0.00 43.74 3.36
2353 6709 1.450312 CAACTCCGCCATGGACTCC 60.450 63.158 18.40 0.00 43.74 3.85
2354 6710 1.918293 AACTCCGCCATGGACTCCA 60.918 57.895 18.40 0.00 43.74 3.86
2355 6711 1.488705 AACTCCGCCATGGACTCCAA 61.489 55.000 18.40 0.00 43.74 3.53
2356 6712 1.450312 CTCCGCCATGGACTCCAAC 60.450 63.158 18.40 0.00 43.74 3.77
2357 6713 2.438434 CCGCCATGGACTCCAACC 60.438 66.667 18.40 0.00 42.00 3.77
2358 6714 2.438434 CGCCATGGACTCCAACCC 60.438 66.667 18.40 0.00 36.95 4.11
2359 6715 2.043953 GCCATGGACTCCAACCCC 60.044 66.667 18.40 0.00 36.95 4.95
2360 6716 2.272146 CCATGGACTCCAACCCCG 59.728 66.667 5.56 0.00 36.95 5.73
2361 6717 2.602676 CCATGGACTCCAACCCCGT 61.603 63.158 5.56 0.00 36.95 5.28
2362 6718 1.078426 CATGGACTCCAACCCCGTC 60.078 63.158 0.66 0.00 36.95 4.79
2363 6719 2.656069 ATGGACTCCAACCCCGTCG 61.656 63.158 0.66 0.00 36.95 5.12
2364 6720 4.754667 GGACTCCAACCCCGTCGC 62.755 72.222 0.00 0.00 0.00 5.19
2365 6721 4.754667 GACTCCAACCCCGTCGCC 62.755 72.222 0.00 0.00 0.00 5.54
2367 6723 4.096003 CTCCAACCCCGTCGCCAT 62.096 66.667 0.00 0.00 0.00 4.40
2368 6724 2.684294 TCCAACCCCGTCGCCATA 60.684 61.111 0.00 0.00 0.00 2.74
2369 6725 2.040009 CTCCAACCCCGTCGCCATAT 62.040 60.000 0.00 0.00 0.00 1.78
2370 6726 1.891919 CCAACCCCGTCGCCATATG 60.892 63.158 0.00 0.00 0.00 1.78
2371 6727 2.203153 AACCCCGTCGCCATATGC 60.203 61.111 0.00 0.00 0.00 3.14
2372 6728 3.767630 AACCCCGTCGCCATATGCC 62.768 63.158 0.00 0.00 36.24 4.40
2373 6729 3.941188 CCCCGTCGCCATATGCCT 61.941 66.667 0.00 0.00 36.24 4.75
2374 6730 2.111043 CCCGTCGCCATATGCCTT 59.889 61.111 0.00 0.00 36.24 4.35
2375 6731 1.525995 CCCGTCGCCATATGCCTTT 60.526 57.895 0.00 0.00 36.24 3.11
2376 6732 1.648720 CCGTCGCCATATGCCTTTG 59.351 57.895 0.00 0.00 36.24 2.77
2377 6733 1.009675 CGTCGCCATATGCCTTTGC 60.010 57.895 0.00 0.00 36.24 3.68
2378 6734 1.360192 GTCGCCATATGCCTTTGCC 59.640 57.895 0.00 0.00 36.24 4.52
2379 6735 1.077140 TCGCCATATGCCTTTGCCA 60.077 52.632 0.00 0.00 36.24 4.92
2380 6736 1.066257 CGCCATATGCCTTTGCCAC 59.934 57.895 0.00 0.00 36.24 5.01
2381 6737 1.386525 CGCCATATGCCTTTGCCACT 61.387 55.000 0.00 0.00 36.24 4.00
2382 6738 0.826062 GCCATATGCCTTTGCCACTT 59.174 50.000 0.00 0.00 36.33 3.16
2383 6739 1.202452 GCCATATGCCTTTGCCACTTC 60.202 52.381 0.00 0.00 36.33 3.01
2384 6740 2.101783 CCATATGCCTTTGCCACTTCA 58.898 47.619 0.00 0.00 36.33 3.02
2385 6741 2.696707 CCATATGCCTTTGCCACTTCAT 59.303 45.455 0.00 0.00 36.33 2.57
2386 6742 3.243636 CCATATGCCTTTGCCACTTCATC 60.244 47.826 0.00 0.00 36.33 2.92
2387 6743 1.188863 ATGCCTTTGCCACTTCATCC 58.811 50.000 0.00 0.00 36.33 3.51
2388 6744 1.243342 TGCCTTTGCCACTTCATCCG 61.243 55.000 0.00 0.00 36.33 4.18
2389 6745 1.508088 CCTTTGCCACTTCATCCGC 59.492 57.895 0.00 0.00 0.00 5.54
2390 6746 1.135315 CTTTGCCACTTCATCCGCG 59.865 57.895 0.00 0.00 0.00 6.46
2391 6747 2.855728 CTTTGCCACTTCATCCGCGC 62.856 60.000 0.00 0.00 0.00 6.86
2397 6753 4.794648 CTTCATCCGCGCCCCCAA 62.795 66.667 0.00 0.00 0.00 4.12
2398 6754 4.122149 TTCATCCGCGCCCCCAAT 62.122 61.111 0.00 0.00 0.00 3.16
2399 6755 4.873810 TCATCCGCGCCCCCAATG 62.874 66.667 0.00 0.00 0.00 2.82
2405 6761 4.813235 GCGCCCCCAATGCCTACA 62.813 66.667 0.00 0.00 0.00 2.74
2406 6762 2.828549 CGCCCCCAATGCCTACAC 60.829 66.667 0.00 0.00 0.00 2.90
2407 6763 2.442087 GCCCCCAATGCCTACACC 60.442 66.667 0.00 0.00 0.00 4.16
2408 6764 2.124320 CCCCCAATGCCTACACCG 60.124 66.667 0.00 0.00 0.00 4.94
2409 6765 2.674754 CCCCAATGCCTACACCGT 59.325 61.111 0.00 0.00 0.00 4.83
2410 6766 1.001393 CCCCAATGCCTACACCGTT 60.001 57.895 0.00 0.00 0.00 4.44
2411 6767 1.029947 CCCCAATGCCTACACCGTTC 61.030 60.000 0.00 0.00 0.00 3.95
2412 6768 1.366111 CCCAATGCCTACACCGTTCG 61.366 60.000 0.00 0.00 0.00 3.95
2413 6769 1.423845 CAATGCCTACACCGTTCGC 59.576 57.895 0.00 0.00 0.00 4.70
2414 6770 1.004320 AATGCCTACACCGTTCGCA 60.004 52.632 0.00 0.00 0.00 5.10
2415 6771 0.392461 AATGCCTACACCGTTCGCAT 60.392 50.000 0.00 0.00 41.77 4.73
2416 6772 0.810031 ATGCCTACACCGTTCGCATC 60.810 55.000 0.00 0.00 35.28 3.91
2417 6773 1.447140 GCCTACACCGTTCGCATCA 60.447 57.895 0.00 0.00 0.00 3.07
2418 6774 1.693083 GCCTACACCGTTCGCATCAC 61.693 60.000 0.00 0.00 0.00 3.06
2419 6775 1.082117 CCTACACCGTTCGCATCACC 61.082 60.000 0.00 0.00 0.00 4.02
2420 6776 1.410737 CTACACCGTTCGCATCACCG 61.411 60.000 0.00 0.00 0.00 4.94
2421 6777 2.144833 TACACCGTTCGCATCACCGT 62.145 55.000 0.00 0.00 0.00 4.83
2422 6778 2.431942 ACCGTTCGCATCACCGTC 60.432 61.111 0.00 0.00 0.00 4.79
2423 6779 3.541831 CCGTTCGCATCACCGTCG 61.542 66.667 0.00 0.00 0.00 5.12
2424 6780 2.503158 CGTTCGCATCACCGTCGA 60.503 61.111 0.00 0.00 0.00 4.20
2425 6781 1.872234 CGTTCGCATCACCGTCGAT 60.872 57.895 0.00 0.00 31.96 3.59
2426 6782 1.631072 GTTCGCATCACCGTCGATG 59.369 57.895 0.00 0.00 44.69 3.84
2430 6786 3.630148 CATCACCGTCGATGCCGC 61.630 66.667 0.00 0.00 36.64 6.53
2431 6787 4.891727 ATCACCGTCGATGCCGCC 62.892 66.667 0.00 0.00 35.37 6.13
2436 6792 4.201679 CGTCGATGCCGCCACCTA 62.202 66.667 0.00 0.00 35.37 3.08
2437 6793 2.421739 GTCGATGCCGCCACCTAT 59.578 61.111 0.00 0.00 35.37 2.57
2438 6794 1.663739 GTCGATGCCGCCACCTATA 59.336 57.895 0.00 0.00 35.37 1.31
2439 6795 0.666577 GTCGATGCCGCCACCTATAC 60.667 60.000 0.00 0.00 35.37 1.47
2440 6796 1.733041 CGATGCCGCCACCTATACG 60.733 63.158 0.00 0.00 0.00 3.06
2441 6797 1.663739 GATGCCGCCACCTATACGA 59.336 57.895 0.00 0.00 0.00 3.43
2442 6798 0.666577 GATGCCGCCACCTATACGAC 60.667 60.000 0.00 0.00 0.00 4.34
2443 6799 2.028631 GCCGCCACCTATACGACC 59.971 66.667 0.00 0.00 0.00 4.79
2444 6800 2.333938 CCGCCACCTATACGACCG 59.666 66.667 0.00 0.00 0.00 4.79
2445 6801 2.188829 CCGCCACCTATACGACCGA 61.189 63.158 0.00 0.00 0.00 4.69
2446 6802 1.009222 CGCCACCTATACGACCGAC 60.009 63.158 0.00 0.00 0.00 4.79
2448 6804 1.009222 CCACCTATACGACCGACGC 60.009 63.158 0.00 0.00 46.94 5.19
2449 6805 1.368493 CACCTATACGACCGACGCG 60.368 63.158 3.53 3.53 46.94 6.01
2450 6806 2.426425 CCTATACGACCGACGCGC 60.426 66.667 5.73 0.00 46.94 6.86
2451 6807 2.790124 CTATACGACCGACGCGCG 60.790 66.667 30.96 30.96 46.94 6.86
2452 6808 3.497407 CTATACGACCGACGCGCGT 62.497 63.158 38.52 38.52 46.94 6.01
2453 6809 3.772000 TATACGACCGACGCGCGTG 62.772 63.158 42.90 29.05 46.94 5.34
2461 6817 4.771356 GACGCGCGTGCTGGACTA 62.771 66.667 42.90 0.00 39.65 2.59
2464 6820 3.479269 GCGCGTGCTGGACTACAC 61.479 66.667 15.02 0.00 38.39 2.90
2465 6821 2.809601 CGCGTGCTGGACTACACC 60.810 66.667 0.00 0.00 33.09 4.16
2466 6822 2.809601 GCGTGCTGGACTACACCG 60.810 66.667 0.00 0.00 33.09 4.94
2467 6823 2.809601 CGTGCTGGACTACACCGC 60.810 66.667 0.00 0.00 33.09 5.68
2468 6824 2.434359 GTGCTGGACTACACCGCC 60.434 66.667 0.00 0.00 0.00 6.13
2469 6825 4.063967 TGCTGGACTACACCGCCG 62.064 66.667 0.00 0.00 0.00 6.46
2470 6826 4.814294 GCTGGACTACACCGCCGG 62.814 72.222 0.00 0.00 0.00 6.13
2471 6827 3.066190 CTGGACTACACCGCCGGA 61.066 66.667 11.71 0.00 0.00 5.14
2472 6828 3.352338 CTGGACTACACCGCCGGAC 62.352 68.421 11.71 0.00 0.00 4.79
2473 6829 4.139234 GGACTACACCGCCGGACC 62.139 72.222 11.71 0.00 0.00 4.46
2474 6830 4.487412 GACTACACCGCCGGACCG 62.487 72.222 11.71 6.99 0.00 4.79
2491 6847 3.334054 GCTCCACCAGGCCCTCTT 61.334 66.667 0.00 0.00 33.74 2.85
2492 6848 2.993853 CTCCACCAGGCCCTCTTC 59.006 66.667 0.00 0.00 33.74 2.87
2493 6849 1.614824 CTCCACCAGGCCCTCTTCT 60.615 63.158 0.00 0.00 33.74 2.85
2494 6850 1.908340 CTCCACCAGGCCCTCTTCTG 61.908 65.000 0.00 0.00 33.74 3.02
2495 6851 2.227036 CCACCAGGCCCTCTTCTGT 61.227 63.158 0.00 0.00 0.00 3.41
2496 6852 1.763770 CACCAGGCCCTCTTCTGTT 59.236 57.895 0.00 0.00 0.00 3.16
2497 6853 0.322008 CACCAGGCCCTCTTCTGTTC 60.322 60.000 0.00 0.00 0.00 3.18
2498 6854 1.301293 CCAGGCCCTCTTCTGTTCC 59.699 63.158 0.00 0.00 0.00 3.62
2499 6855 1.078848 CAGGCCCTCTTCTGTTCCG 60.079 63.158 0.00 0.00 0.00 4.30
2500 6856 2.269241 GGCCCTCTTCTGTTCCGG 59.731 66.667 0.00 0.00 0.00 5.14
2501 6857 2.593956 GGCCCTCTTCTGTTCCGGT 61.594 63.158 0.00 0.00 0.00 5.28
2502 6858 1.079057 GCCCTCTTCTGTTCCGGTC 60.079 63.158 0.00 0.00 0.00 4.79
2503 6859 1.215647 CCCTCTTCTGTTCCGGTCG 59.784 63.158 0.00 0.00 0.00 4.79
2504 6860 1.215647 CCTCTTCTGTTCCGGTCGG 59.784 63.158 0.00 2.52 0.00 4.79
2505 6861 1.215647 CTCTTCTGTTCCGGTCGGG 59.784 63.158 9.68 0.00 35.59 5.14
2506 6862 2.227089 CTCTTCTGTTCCGGTCGGGG 62.227 65.000 9.68 0.00 36.01 5.73
2507 6863 3.952628 CTTCTGTTCCGGTCGGGGC 62.953 68.421 9.68 3.70 36.01 5.80
2535 6891 3.900888 GGAACCAGACACCCCTGA 58.099 61.111 0.00 0.00 36.29 3.86
2536 6892 1.375326 GGAACCAGACACCCCTGAC 59.625 63.158 0.00 0.00 36.29 3.51
2537 6893 1.004918 GAACCAGACACCCCTGACG 60.005 63.158 0.00 0.00 36.29 4.35
2538 6894 2.450479 GAACCAGACACCCCTGACGG 62.450 65.000 0.00 0.00 36.29 4.79
2539 6895 4.394712 CCAGACACCCCTGACGGC 62.395 72.222 0.00 0.00 36.29 5.68
2540 6896 4.394712 CAGACACCCCTGACGGCC 62.395 72.222 0.00 0.00 36.29 6.13
2541 6897 4.954118 AGACACCCCTGACGGCCA 62.954 66.667 2.24 0.00 0.00 5.36
2542 6898 3.948719 GACACCCCTGACGGCCAA 61.949 66.667 2.24 0.00 0.00 4.52
2543 6899 4.265056 ACACCCCTGACGGCCAAC 62.265 66.667 2.24 0.00 0.00 3.77
2546 6902 4.722700 CCCCTGACGGCCAACCTG 62.723 72.222 2.24 0.00 0.00 4.00
2548 6904 4.641645 CCTGACGGCCAACCTGCA 62.642 66.667 2.24 0.00 0.00 4.41
2549 6905 3.052082 CTGACGGCCAACCTGCAG 61.052 66.667 6.78 6.78 0.00 4.41
2555 6911 3.982241 GCCAACCTGCAGCGCTTT 61.982 61.111 7.50 0.00 0.00 3.51
2556 6912 2.049802 CCAACCTGCAGCGCTTTG 60.050 61.111 7.50 9.79 0.00 2.77
2557 6913 2.723746 CAACCTGCAGCGCTTTGT 59.276 55.556 7.50 0.00 0.00 2.83
2558 6914 1.659335 CAACCTGCAGCGCTTTGTG 60.659 57.895 7.50 0.00 0.00 3.33
2559 6915 2.848858 AACCTGCAGCGCTTTGTGG 61.849 57.895 7.50 10.67 0.00 4.17
2560 6916 4.047059 CCTGCAGCGCTTTGTGGG 62.047 66.667 7.50 1.82 0.00 4.61
2561 6917 4.047059 CTGCAGCGCTTTGTGGGG 62.047 66.667 7.50 0.00 0.00 4.96
2564 6920 3.376078 CAGCGCTTTGTGGGGCAT 61.376 61.111 7.50 0.00 45.65 4.40
2565 6921 3.064324 AGCGCTTTGTGGGGCATC 61.064 61.111 2.64 0.00 45.65 3.91
2566 6922 4.481112 GCGCTTTGTGGGGCATCG 62.481 66.667 0.00 0.00 43.28 3.84
2567 6923 4.481112 CGCTTTGTGGGGCATCGC 62.481 66.667 0.00 0.00 0.00 4.58
2568 6924 4.481112 GCTTTGTGGGGCATCGCG 62.481 66.667 0.00 0.00 0.00 5.87
2569 6925 3.814268 CTTTGTGGGGCATCGCGG 61.814 66.667 6.13 0.00 0.00 6.46
2577 6933 3.799755 GGCATCGCGGCTTCGTTT 61.800 61.111 6.13 0.00 37.17 3.60
2578 6934 2.175811 GCATCGCGGCTTCGTTTT 59.824 55.556 6.13 0.00 36.07 2.43
2579 6935 1.863446 GCATCGCGGCTTCGTTTTC 60.863 57.895 6.13 0.00 36.07 2.29
2580 6936 1.226018 CATCGCGGCTTCGTTTTCC 60.226 57.895 6.13 0.00 36.07 3.13
2581 6937 1.669760 ATCGCGGCTTCGTTTTCCA 60.670 52.632 6.13 0.00 36.07 3.53
2582 6938 1.908066 ATCGCGGCTTCGTTTTCCAC 61.908 55.000 6.13 0.00 36.07 4.02
2583 6939 2.254350 GCGGCTTCGTTTTCCACC 59.746 61.111 0.00 0.00 36.07 4.61
2584 6940 2.548295 GCGGCTTCGTTTTCCACCA 61.548 57.895 0.00 0.00 36.07 4.17
2585 6941 1.862602 GCGGCTTCGTTTTCCACCAT 61.863 55.000 0.00 0.00 36.07 3.55
2586 6942 0.109781 CGGCTTCGTTTTCCACCATG 60.110 55.000 0.00 0.00 0.00 3.66
2587 6943 0.388520 GGCTTCGTTTTCCACCATGC 60.389 55.000 0.00 0.00 0.00 4.06
2588 6944 0.388520 GCTTCGTTTTCCACCATGCC 60.389 55.000 0.00 0.00 0.00 4.40
2589 6945 0.243636 CTTCGTTTTCCACCATGCCC 59.756 55.000 0.00 0.00 0.00 5.36
2590 6946 0.468214 TTCGTTTTCCACCATGCCCA 60.468 50.000 0.00 0.00 0.00 5.36
2591 6947 0.893270 TCGTTTTCCACCATGCCCAG 60.893 55.000 0.00 0.00 0.00 4.45
2592 6948 1.876497 CGTTTTCCACCATGCCCAGG 61.876 60.000 0.00 0.00 0.00 4.45
2593 6949 0.831711 GTTTTCCACCATGCCCAGGT 60.832 55.000 0.00 0.00 40.85 4.00
2594 6950 0.541764 TTTTCCACCATGCCCAGGTC 60.542 55.000 0.00 0.00 37.23 3.85
2595 6951 2.762969 TTTCCACCATGCCCAGGTCG 62.763 60.000 0.00 0.00 37.23 4.79
2596 6952 3.716195 CCACCATGCCCAGGTCGA 61.716 66.667 0.00 0.00 37.23 4.20
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
14 15 1.474077 CCTTTAGCAGGGTCACAATGC 59.526 52.381 0.00 0.00 39.39 3.56
218 219 1.072015 GAGAATAGAGCCCTGCATGCT 59.928 52.381 20.33 10.38 43.03 3.79
221 222 1.698532 CAGGAGAATAGAGCCCTGCAT 59.301 52.381 0.00 0.00 39.59 3.96
323 324 2.996621 CACAAGAGAGTCCAATTCGACC 59.003 50.000 0.00 0.00 32.91 4.79
380 384 6.349611 CCTTTAGCAGAAAAGCATAAGCAGAA 60.350 38.462 0.00 0.00 45.49 3.02
452 456 0.247537 CCTTATTTTGCGACCGCGAC 60.248 55.000 8.23 0.00 45.51 5.19
662 666 8.726068 TCACTTGCGAATTGAGAACAATAAATA 58.274 29.630 0.00 0.00 44.67 1.40
670 674 6.370593 TGTTTATCACTTGCGAATTGAGAAC 58.629 36.000 0.00 0.00 0.00 3.01
694 698 7.499232 CGGAGGGATTTCAGTATTTGTTATTCT 59.501 37.037 0.00 0.00 0.00 2.40
695 699 7.497909 TCGGAGGGATTTCAGTATTTGTTATTC 59.502 37.037 0.00 0.00 0.00 1.75
707 711 2.171448 ACTTGGATCGGAGGGATTTCAG 59.829 50.000 0.00 0.00 34.82 3.02
710 714 4.037927 TCTTACTTGGATCGGAGGGATTT 58.962 43.478 0.00 0.00 34.82 2.17
712 716 3.235200 CTCTTACTTGGATCGGAGGGAT 58.765 50.000 0.00 0.00 38.35 3.85
747 765 6.105657 GCAAATGCAAACAAAGTACAACTT 57.894 33.333 0.00 0.00 39.63 2.66
791 817 2.904011 AACAACGAAGCAAACACGAA 57.096 40.000 0.00 0.00 0.00 3.85
806 832 1.149627 CCCTGGACGGTGGAAACAA 59.850 57.895 0.00 0.00 46.06 2.83
823 849 0.170339 GAAATACAGGCACGGCAACC 59.830 55.000 0.00 0.00 0.00 3.77
828 854 7.604164 AGATATGATTAAGAAATACAGGCACGG 59.396 37.037 0.00 0.00 0.00 4.94
847 873 4.388773 GCGGCAATAAACGATCAGATATGA 59.611 41.667 0.00 0.00 0.00 2.15
851 877 2.838736 AGCGGCAATAAACGATCAGAT 58.161 42.857 1.45 0.00 0.00 2.90
852 878 2.309528 AGCGGCAATAAACGATCAGA 57.690 45.000 1.45 0.00 0.00 3.27
853 879 2.221055 GGTAGCGGCAATAAACGATCAG 59.779 50.000 1.45 0.00 0.00 2.90
854 880 2.206750 GGTAGCGGCAATAAACGATCA 58.793 47.619 1.45 0.00 0.00 2.92
855 881 2.206750 TGGTAGCGGCAATAAACGATC 58.793 47.619 1.45 0.00 0.00 3.69
856 882 2.210116 CTGGTAGCGGCAATAAACGAT 58.790 47.619 1.45 0.00 0.00 3.73
857 883 1.647346 CTGGTAGCGGCAATAAACGA 58.353 50.000 1.45 0.00 0.00 3.85
858 884 0.027586 GCTGGTAGCGGCAATAAACG 59.972 55.000 20.65 0.00 0.00 3.60
874 912 1.532868 CTGACGAAACCTTCAAGGCTG 59.467 52.381 2.20 0.00 39.63 4.85
905 943 1.224075 CATCGATGTGGTGAGATGCC 58.776 55.000 17.50 0.00 34.85 4.40
912 952 1.875009 CTGATCCCATCGATGTGGTG 58.125 55.000 23.27 8.40 37.57 4.17
961 1006 2.091885 GGGACCTGGCATGAAGGAATTA 60.092 50.000 18.88 0.00 38.27 1.40
981 1026 1.529713 GGCTAGAGGGAGACGAGGG 60.530 68.421 0.00 0.00 0.00 4.30
1006 1060 1.657094 GCGGACGATGACACGTAAAAT 59.343 47.619 0.00 0.00 46.52 1.82
1007 1061 1.062258 GCGGACGATGACACGTAAAA 58.938 50.000 0.00 0.00 46.52 1.52
1008 1062 0.733566 GGCGGACGATGACACGTAAA 60.734 55.000 0.00 0.00 46.52 2.01
1010 1064 2.486504 GGCGGACGATGACACGTA 59.513 61.111 0.00 0.00 46.52 3.57
1014 1068 4.451150 GCTGGGCGGACGATGACA 62.451 66.667 0.00 0.00 0.00 3.58
1015 1069 4.148825 AGCTGGGCGGACGATGAC 62.149 66.667 0.00 0.00 0.00 3.06
1016 1070 3.838271 GAGCTGGGCGGACGATGA 61.838 66.667 0.00 0.00 0.00 2.92
1017 1071 4.899239 GGAGCTGGGCGGACGATG 62.899 72.222 0.00 0.00 0.00 3.84
1020 1074 4.821589 GAAGGAGCTGGGCGGACG 62.822 72.222 0.00 0.00 0.00 4.79
1021 1075 3.706373 TGAAGGAGCTGGGCGGAC 61.706 66.667 0.00 0.00 0.00 4.79
1035 1164 3.641986 GTCAAACGGCGGCGTGAA 61.642 61.111 38.07 22.41 0.00 3.18
1054 1183 0.107508 CTCACCAGGATGCGGAATGT 60.108 55.000 0.00 0.00 31.97 2.71
1095 1224 1.664321 GAGAGAGGGCGCCTACGAAA 61.664 60.000 28.56 0.00 43.93 3.46
1099 1228 2.197605 GGAGAGAGAGGGCGCCTAC 61.198 68.421 28.56 20.03 31.76 3.18
1106 1235 1.999648 CCAGATGAGGAGAGAGAGGG 58.000 60.000 0.00 0.00 0.00 4.30
1113 1242 2.771562 AGATGAGCCAGATGAGGAGA 57.228 50.000 0.00 0.00 0.00 3.71
1151 1280 3.822192 CCGAGTCCACGGCGATCA 61.822 66.667 16.62 0.00 46.20 2.92
1170 1299 0.095245 CGTTGAAGCGCCATAGTGTG 59.905 55.000 2.29 0.00 0.00 3.82
1176 1305 0.884704 AGTTCACGTTGAAGCGCCAT 60.885 50.000 2.29 0.00 37.00 4.40
1180 1309 0.158928 GTCGAGTTCACGTTGAAGCG 59.841 55.000 12.39 12.39 37.00 4.68
1189 1318 1.282930 GGGCTTGTCGTCGAGTTCAC 61.283 60.000 0.00 0.00 0.00 3.18
1213 1342 1.230324 GTGAGGTTGAAGGTCAGCAC 58.770 55.000 0.00 0.00 28.47 4.40
1219 1348 1.071471 CGGCTGTGAGGTTGAAGGT 59.929 57.895 0.00 0.00 0.00 3.50
1246 1375 0.505655 CGTTTGTTCGGGTTCGAGAC 59.494 55.000 0.00 0.00 46.75 3.36
1259 1388 4.037208 CGTAGTAGATGGATACCCGTTTGT 59.963 45.833 0.00 0.00 34.29 2.83
1482 5817 2.037902 TGTCATCAGGTCGCCAAACTTA 59.962 45.455 0.00 0.00 0.00 2.24
1565 5900 1.067142 TCACAATACACTCGACCCTGC 60.067 52.381 0.00 0.00 0.00 4.85
1635 5980 1.291877 ACGTTTCCAGATGAGCGCAC 61.292 55.000 11.47 3.13 0.00 5.34
1652 5997 2.440501 GGCGCTTGAATCAATTGTACG 58.559 47.619 7.64 0.00 0.00 3.67
1687 6032 4.830765 TCGGAGCAAATCGGGCCG 62.831 66.667 22.51 22.51 43.11 6.13
1714 6059 3.070018 CAATTCAGAGGAGTCGCAACTT 58.930 45.455 0.00 0.00 35.28 2.66
1727 6072 4.393834 TGAAATGACCGAACCAATTCAGA 58.606 39.130 0.00 0.00 30.93 3.27
1781 6126 4.392940 AGAGAAAATATCATTGGCCGAGG 58.607 43.478 0.00 0.00 0.00 4.63
1813 6159 5.303589 GGAATGATCATTGGTCCATTCACAT 59.696 40.000 25.37 0.00 43.85 3.21
1816 6162 4.869451 TGGAATGATCATTGGTCCATTCA 58.131 39.130 25.37 1.79 43.85 2.57
1843 6189 3.505836 GGTACGCTTTGTAGTAGGTGTC 58.494 50.000 0.00 0.00 32.51 3.67
1865 6211 0.030504 TGTTTGTCATGGCTTGTGCG 59.969 50.000 0.00 0.00 40.82 5.34
1981 6337 6.403866 AGCCTTATCTTAGATGTGTCAGAG 57.596 41.667 4.78 0.00 0.00 3.35
1990 6346 8.428063 GGCATGTATGATAGCCTTATCTTAGAT 58.572 37.037 0.00 0.00 43.70 1.98
1993 6349 6.673978 AGGGCATGTATGATAGCCTTATCTTA 59.326 38.462 0.00 0.00 46.23 2.10
2001 6357 3.274288 GCTAAGGGCATGTATGATAGCC 58.726 50.000 0.00 0.00 46.28 3.93
2043 6399 4.927557 GCCCATCCATATGTGGCA 57.072 55.556 3.06 0.00 45.63 4.92
2059 6415 2.162809 CCTAATGGTACGGTTGGTTTGC 59.837 50.000 0.00 0.00 0.00 3.68
2060 6416 3.414269 ACCTAATGGTACGGTTGGTTTG 58.586 45.455 0.00 0.00 46.43 2.93
2061 6417 3.793819 ACCTAATGGTACGGTTGGTTT 57.206 42.857 0.00 0.00 46.43 3.27
2071 6427 6.540914 GCAATGCTTAGTGTTACCTAATGGTA 59.459 38.462 0.00 0.00 46.43 3.25
2148 6504 9.460906 GGTTCGATTTAGACTTCTAATACGAAT 57.539 33.333 25.38 10.04 45.45 3.34
2149 6505 7.917505 GGGTTCGATTTAGACTTCTAATACGAA 59.082 37.037 22.31 22.31 43.99 3.85
2150 6506 7.284034 AGGGTTCGATTTAGACTTCTAATACGA 59.716 37.037 16.68 16.68 40.59 3.43
2151 6507 7.424001 AGGGTTCGATTTAGACTTCTAATACG 58.576 38.462 13.99 13.99 38.16 3.06
2154 6510 8.202811 GGTTAGGGTTCGATTTAGACTTCTAAT 58.797 37.037 0.00 0.00 38.16 1.73
2155 6511 7.398332 AGGTTAGGGTTCGATTTAGACTTCTAA 59.602 37.037 0.00 0.00 36.72 2.10
2156 6512 6.894103 AGGTTAGGGTTCGATTTAGACTTCTA 59.106 38.462 0.00 0.00 0.00 2.10
2157 6513 5.720520 AGGTTAGGGTTCGATTTAGACTTCT 59.279 40.000 0.00 0.00 0.00 2.85
2158 6514 5.975282 AGGTTAGGGTTCGATTTAGACTTC 58.025 41.667 0.00 0.00 0.00 3.01
2159 6515 5.105023 GGAGGTTAGGGTTCGATTTAGACTT 60.105 44.000 0.00 0.00 0.00 3.01
2160 6516 4.405036 GGAGGTTAGGGTTCGATTTAGACT 59.595 45.833 0.00 0.00 0.00 3.24
2161 6517 4.405036 AGGAGGTTAGGGTTCGATTTAGAC 59.595 45.833 0.00 0.00 0.00 2.59
2162 6518 4.404715 CAGGAGGTTAGGGTTCGATTTAGA 59.595 45.833 0.00 0.00 0.00 2.10
2163 6519 4.404715 TCAGGAGGTTAGGGTTCGATTTAG 59.595 45.833 0.00 0.00 0.00 1.85
2164 6520 4.355549 TCAGGAGGTTAGGGTTCGATTTA 58.644 43.478 0.00 0.00 0.00 1.40
2165 6521 3.178865 TCAGGAGGTTAGGGTTCGATTT 58.821 45.455 0.00 0.00 0.00 2.17
2166 6522 2.829023 TCAGGAGGTTAGGGTTCGATT 58.171 47.619 0.00 0.00 0.00 3.34
2167 6523 2.544844 TCAGGAGGTTAGGGTTCGAT 57.455 50.000 0.00 0.00 0.00 3.59
2168 6524 2.385803 GATCAGGAGGTTAGGGTTCGA 58.614 52.381 0.00 0.00 0.00 3.71
2169 6525 1.413077 GGATCAGGAGGTTAGGGTTCG 59.587 57.143 0.00 0.00 0.00 3.95
2170 6526 1.769465 GGGATCAGGAGGTTAGGGTTC 59.231 57.143 0.00 0.00 0.00 3.62
2171 6527 1.369983 AGGGATCAGGAGGTTAGGGTT 59.630 52.381 0.00 0.00 0.00 4.11
2172 6528 1.027815 AGGGATCAGGAGGTTAGGGT 58.972 55.000 0.00 0.00 0.00 4.34
2173 6529 1.062121 TCAGGGATCAGGAGGTTAGGG 60.062 57.143 0.00 0.00 0.00 3.53
2174 6530 2.478872 TCAGGGATCAGGAGGTTAGG 57.521 55.000 0.00 0.00 0.00 2.69
2175 6531 4.410228 TCATTTCAGGGATCAGGAGGTTAG 59.590 45.833 0.00 0.00 0.00 2.34
2176 6532 4.370776 TCATTTCAGGGATCAGGAGGTTA 58.629 43.478 0.00 0.00 0.00 2.85
2177 6533 3.192944 TCATTTCAGGGATCAGGAGGTT 58.807 45.455 0.00 0.00 0.00 3.50
2178 6534 2.776536 CTCATTTCAGGGATCAGGAGGT 59.223 50.000 0.00 0.00 0.00 3.85
2179 6535 2.486907 GCTCATTTCAGGGATCAGGAGG 60.487 54.545 0.00 0.00 0.00 4.30
2180 6536 2.172082 TGCTCATTTCAGGGATCAGGAG 59.828 50.000 0.00 0.00 0.00 3.69
2181 6537 2.092753 GTGCTCATTTCAGGGATCAGGA 60.093 50.000 0.00 0.00 0.00 3.86
2182 6538 2.295885 GTGCTCATTTCAGGGATCAGG 58.704 52.381 0.00 0.00 0.00 3.86
2183 6539 2.092538 AGGTGCTCATTTCAGGGATCAG 60.093 50.000 0.00 0.00 0.00 2.90
2184 6540 1.918262 AGGTGCTCATTTCAGGGATCA 59.082 47.619 0.00 0.00 0.00 2.92
2185 6541 2.686915 CAAGGTGCTCATTTCAGGGATC 59.313 50.000 0.00 0.00 0.00 3.36
2186 6542 2.042162 ACAAGGTGCTCATTTCAGGGAT 59.958 45.455 0.00 0.00 0.00 3.85
2187 6543 1.425066 ACAAGGTGCTCATTTCAGGGA 59.575 47.619 0.00 0.00 0.00 4.20
2188 6544 1.915141 ACAAGGTGCTCATTTCAGGG 58.085 50.000 0.00 0.00 0.00 4.45
2189 6545 5.649782 AAATACAAGGTGCTCATTTCAGG 57.350 39.130 0.00 0.00 0.00 3.86
2190 6546 7.988737 TCATAAATACAAGGTGCTCATTTCAG 58.011 34.615 0.00 0.00 0.00 3.02
2191 6547 7.936496 TCATAAATACAAGGTGCTCATTTCA 57.064 32.000 0.00 0.00 0.00 2.69
2192 6548 9.455847 GATTCATAAATACAAGGTGCTCATTTC 57.544 33.333 0.00 0.00 0.00 2.17
2193 6549 8.416329 GGATTCATAAATACAAGGTGCTCATTT 58.584 33.333 0.00 0.00 0.00 2.32
2194 6550 7.014615 GGGATTCATAAATACAAGGTGCTCATT 59.985 37.037 0.00 0.00 0.00 2.57
2195 6551 6.491403 GGGATTCATAAATACAAGGTGCTCAT 59.509 38.462 0.00 0.00 0.00 2.90
2196 6552 5.827797 GGGATTCATAAATACAAGGTGCTCA 59.172 40.000 0.00 0.00 0.00 4.26
2197 6553 5.049405 CGGGATTCATAAATACAAGGTGCTC 60.049 44.000 0.00 0.00 0.00 4.26
2198 6554 4.821805 CGGGATTCATAAATACAAGGTGCT 59.178 41.667 0.00 0.00 0.00 4.40
2199 6555 4.023193 CCGGGATTCATAAATACAAGGTGC 60.023 45.833 0.00 0.00 0.00 5.01
2200 6556 4.518970 CCCGGGATTCATAAATACAAGGTG 59.481 45.833 18.48 0.00 0.00 4.00
2201 6557 4.725490 CCCGGGATTCATAAATACAAGGT 58.275 43.478 18.48 0.00 0.00 3.50
2202 6558 3.506067 GCCCGGGATTCATAAATACAAGG 59.494 47.826 29.31 0.00 0.00 3.61
2203 6559 4.141287 TGCCCGGGATTCATAAATACAAG 58.859 43.478 29.31 0.00 0.00 3.16
2204 6560 4.171878 TGCCCGGGATTCATAAATACAA 57.828 40.909 29.31 0.00 0.00 2.41
2205 6561 3.866703 TGCCCGGGATTCATAAATACA 57.133 42.857 29.31 4.49 0.00 2.29
2206 6562 5.010282 AGAATGCCCGGGATTCATAAATAC 58.990 41.667 30.68 12.17 33.03 1.89
2207 6563 5.255397 AGAATGCCCGGGATTCATAAATA 57.745 39.130 30.68 7.72 33.03 1.40
2208 6564 4.118168 AGAATGCCCGGGATTCATAAAT 57.882 40.909 30.68 17.06 33.03 1.40
2209 6565 3.593442 AGAATGCCCGGGATTCATAAA 57.407 42.857 30.68 9.26 33.03 1.40
2210 6566 3.593442 AAGAATGCCCGGGATTCATAA 57.407 42.857 30.68 10.40 33.03 1.90
2211 6567 3.221771 CAAAGAATGCCCGGGATTCATA 58.778 45.455 30.68 12.32 33.03 2.15
2212 6568 2.034124 CAAAGAATGCCCGGGATTCAT 58.966 47.619 30.68 23.01 33.03 2.57
2213 6569 1.473258 CAAAGAATGCCCGGGATTCA 58.527 50.000 30.68 20.42 33.03 2.57
2224 6580 8.586273 CGACAAACAAATATAAGGCAAAGAATG 58.414 33.333 0.00 0.00 0.00 2.67
2225 6581 7.275560 GCGACAAACAAATATAAGGCAAAGAAT 59.724 33.333 0.00 0.00 0.00 2.40
2226 6582 6.584563 GCGACAAACAAATATAAGGCAAAGAA 59.415 34.615 0.00 0.00 0.00 2.52
2227 6583 6.090129 GCGACAAACAAATATAAGGCAAAGA 58.910 36.000 0.00 0.00 0.00 2.52
2228 6584 5.003402 CGCGACAAACAAATATAAGGCAAAG 59.997 40.000 0.00 0.00 0.00 2.77
2229 6585 4.854291 CGCGACAAACAAATATAAGGCAAA 59.146 37.500 0.00 0.00 0.00 3.68
2230 6586 4.083217 ACGCGACAAACAAATATAAGGCAA 60.083 37.500 15.93 0.00 0.00 4.52
2231 6587 3.437395 ACGCGACAAACAAATATAAGGCA 59.563 39.130 15.93 0.00 0.00 4.75
2232 6588 4.011058 ACGCGACAAACAAATATAAGGC 57.989 40.909 15.93 0.00 0.00 4.35
2233 6589 4.260670 CGACGCGACAAACAAATATAAGG 58.739 43.478 15.93 0.00 0.00 2.69
2234 6590 4.260670 CCGACGCGACAAACAAATATAAG 58.739 43.478 15.93 0.00 0.00 1.73
2235 6591 3.062369 CCCGACGCGACAAACAAATATAA 59.938 43.478 15.93 0.00 0.00 0.98
2236 6592 2.604011 CCCGACGCGACAAACAAATATA 59.396 45.455 15.93 0.00 0.00 0.86
2237 6593 1.395608 CCCGACGCGACAAACAAATAT 59.604 47.619 15.93 0.00 0.00 1.28
2238 6594 0.791422 CCCGACGCGACAAACAAATA 59.209 50.000 15.93 0.00 0.00 1.40
2239 6595 0.881159 TCCCGACGCGACAAACAAAT 60.881 50.000 15.93 0.00 0.00 2.32
2240 6596 1.088340 TTCCCGACGCGACAAACAAA 61.088 50.000 15.93 0.00 0.00 2.83
2241 6597 1.492319 CTTCCCGACGCGACAAACAA 61.492 55.000 15.93 0.00 0.00 2.83
2242 6598 1.952133 CTTCCCGACGCGACAAACA 60.952 57.895 15.93 0.00 0.00 2.83
2243 6599 2.851104 CTTCCCGACGCGACAAAC 59.149 61.111 15.93 0.00 0.00 2.93
2244 6600 3.039588 GCTTCCCGACGCGACAAA 61.040 61.111 15.93 0.04 0.00 2.83
2245 6601 4.287781 TGCTTCCCGACGCGACAA 62.288 61.111 15.93 0.00 0.00 3.18
2251 6607 2.126071 ATCGTGTGCTTCCCGACG 60.126 61.111 0.00 0.00 32.86 5.12
2252 6608 1.810030 GGATCGTGTGCTTCCCGAC 60.810 63.158 0.00 0.00 32.86 4.79
2253 6609 2.577059 GGATCGTGTGCTTCCCGA 59.423 61.111 0.00 0.00 34.79 5.14
2254 6610 2.511600 GGGATCGTGTGCTTCCCG 60.512 66.667 0.00 0.00 39.80 5.14
2255 6611 2.511600 CGGGATCGTGTGCTTCCC 60.512 66.667 0.00 0.00 44.83 3.97
2256 6612 3.195698 GCGGGATCGTGTGCTTCC 61.196 66.667 0.00 0.00 38.89 3.46
2257 6613 3.195698 GGCGGGATCGTGTGCTTC 61.196 66.667 0.00 0.00 38.89 3.86
2258 6614 4.778143 GGGCGGGATCGTGTGCTT 62.778 66.667 0.00 0.00 38.89 3.91
2270 6626 2.081462 GAATTGTATATTCCCGGGCGG 58.919 52.381 18.49 0.00 0.00 6.13
2271 6627 3.000727 GAGAATTGTATATTCCCGGGCG 58.999 50.000 18.49 0.00 0.00 6.13
2272 6628 3.009143 AGGAGAATTGTATATTCCCGGGC 59.991 47.826 18.49 0.00 0.00 6.13
2273 6629 4.286032 TCAGGAGAATTGTATATTCCCGGG 59.714 45.833 16.85 16.85 0.00 5.73
2274 6630 5.221641 TGTCAGGAGAATTGTATATTCCCGG 60.222 44.000 0.00 0.00 0.00 5.73
2275 6631 5.853936 TGTCAGGAGAATTGTATATTCCCG 58.146 41.667 0.00 0.00 0.00 5.14
2276 6632 8.697507 AATTGTCAGGAGAATTGTATATTCCC 57.302 34.615 3.87 0.00 33.70 3.97
2277 6633 9.956720 CAAATTGTCAGGAGAATTGTATATTCC 57.043 33.333 5.32 0.00 34.95 3.01
2278 6634 9.956720 CCAAATTGTCAGGAGAATTGTATATTC 57.043 33.333 5.32 0.00 34.95 1.75
2279 6635 8.917088 CCCAAATTGTCAGGAGAATTGTATATT 58.083 33.333 5.32 0.00 34.95 1.28
2280 6636 7.506938 CCCCAAATTGTCAGGAGAATTGTATAT 59.493 37.037 5.32 0.00 34.95 0.86
2281 6637 6.833416 CCCCAAATTGTCAGGAGAATTGTATA 59.167 38.462 5.32 0.00 34.95 1.47
2282 6638 5.658190 CCCCAAATTGTCAGGAGAATTGTAT 59.342 40.000 5.32 0.00 34.95 2.29
2283 6639 5.016173 CCCCAAATTGTCAGGAGAATTGTA 58.984 41.667 5.32 0.00 34.95 2.41
2284 6640 3.834231 CCCCAAATTGTCAGGAGAATTGT 59.166 43.478 5.32 0.00 34.95 2.71
2285 6641 3.368739 GCCCCAAATTGTCAGGAGAATTG 60.369 47.826 5.32 1.46 34.95 2.32
2286 6642 2.833943 GCCCCAAATTGTCAGGAGAATT 59.166 45.455 0.00 0.00 36.06 2.17
2287 6643 2.460669 GCCCCAAATTGTCAGGAGAAT 58.539 47.619 0.00 0.00 0.00 2.40
2288 6644 1.549950 GGCCCCAAATTGTCAGGAGAA 60.550 52.381 0.00 0.00 0.00 2.87
2289 6645 0.039618 GGCCCCAAATTGTCAGGAGA 59.960 55.000 0.00 0.00 0.00 3.71
2290 6646 0.251742 TGGCCCCAAATTGTCAGGAG 60.252 55.000 0.00 0.00 0.00 3.69
2291 6647 0.541764 GTGGCCCCAAATTGTCAGGA 60.542 55.000 0.00 0.00 0.00 3.86
2292 6648 0.831288 TGTGGCCCCAAATTGTCAGG 60.831 55.000 0.00 0.00 0.00 3.86
2293 6649 1.066716 CATGTGGCCCCAAATTGTCAG 60.067 52.381 0.00 0.00 0.00 3.51
2294 6650 0.975135 CATGTGGCCCCAAATTGTCA 59.025 50.000 0.00 0.00 0.00 3.58
2295 6651 1.066929 GTCATGTGGCCCCAAATTGTC 60.067 52.381 0.00 0.00 0.00 3.18
2296 6652 0.975887 GTCATGTGGCCCCAAATTGT 59.024 50.000 0.00 0.00 0.00 2.71
2297 6653 0.975135 TGTCATGTGGCCCCAAATTG 59.025 50.000 0.00 0.00 0.00 2.32
2298 6654 1.832998 GATGTCATGTGGCCCCAAATT 59.167 47.619 0.00 0.00 0.00 1.82
2299 6655 1.488390 GATGTCATGTGGCCCCAAAT 58.512 50.000 0.00 0.00 0.00 2.32
2300 6656 0.614415 GGATGTCATGTGGCCCCAAA 60.614 55.000 0.00 0.00 0.00 3.28
2301 6657 1.000233 GGATGTCATGTGGCCCCAA 60.000 57.895 0.00 0.00 0.00 4.12
2302 6658 1.582853 ATGGATGTCATGTGGCCCCA 61.583 55.000 0.00 0.00 34.22 4.96
2303 6659 0.825010 GATGGATGTCATGTGGCCCC 60.825 60.000 0.00 0.00 35.97 5.80
2304 6660 0.184451 AGATGGATGTCATGTGGCCC 59.816 55.000 0.00 0.00 35.97 5.80
2305 6661 1.952296 GAAGATGGATGTCATGTGGCC 59.048 52.381 0.00 0.00 35.97 5.36
2306 6662 2.928334 AGAAGATGGATGTCATGTGGC 58.072 47.619 0.00 0.00 35.97 5.01
2307 6663 3.881688 GGAAGAAGATGGATGTCATGTGG 59.118 47.826 0.00 0.00 35.97 4.17
2308 6664 4.778579 AGGAAGAAGATGGATGTCATGTG 58.221 43.478 0.00 0.00 35.97 3.21
2309 6665 4.442612 CGAGGAAGAAGATGGATGTCATGT 60.443 45.833 0.00 0.00 35.97 3.21
2310 6666 4.056740 CGAGGAAGAAGATGGATGTCATG 58.943 47.826 0.00 0.00 35.97 3.07
2311 6667 3.963374 TCGAGGAAGAAGATGGATGTCAT 59.037 43.478 0.00 0.00 39.13 3.06
2312 6668 3.365472 TCGAGGAAGAAGATGGATGTCA 58.635 45.455 0.00 0.00 0.00 3.58
2313 6669 4.038522 TGATCGAGGAAGAAGATGGATGTC 59.961 45.833 0.00 0.00 0.00 3.06
2314 6670 3.963374 TGATCGAGGAAGAAGATGGATGT 59.037 43.478 0.00 0.00 0.00 3.06
2315 6671 4.597404 TGATCGAGGAAGAAGATGGATG 57.403 45.455 0.00 0.00 0.00 3.51
2316 6672 4.653341 AGTTGATCGAGGAAGAAGATGGAT 59.347 41.667 0.00 0.00 0.00 3.41
2317 6673 4.026744 AGTTGATCGAGGAAGAAGATGGA 58.973 43.478 0.00 0.00 0.00 3.41
2318 6674 4.367450 GAGTTGATCGAGGAAGAAGATGG 58.633 47.826 0.00 0.00 0.00 3.51
2319 6675 4.367450 GGAGTTGATCGAGGAAGAAGATG 58.633 47.826 0.00 0.00 0.00 2.90
2320 6676 3.067461 CGGAGTTGATCGAGGAAGAAGAT 59.933 47.826 0.00 0.00 0.00 2.40
2321 6677 2.423892 CGGAGTTGATCGAGGAAGAAGA 59.576 50.000 0.00 0.00 0.00 2.87
2322 6678 2.803451 CGGAGTTGATCGAGGAAGAAG 58.197 52.381 0.00 0.00 0.00 2.85
2323 6679 1.135083 GCGGAGTTGATCGAGGAAGAA 60.135 52.381 0.00 0.00 0.00 2.52
2324 6680 0.456221 GCGGAGTTGATCGAGGAAGA 59.544 55.000 0.00 0.00 0.00 2.87
2325 6681 0.528684 GGCGGAGTTGATCGAGGAAG 60.529 60.000 0.00 0.00 0.00 3.46
2326 6682 1.254975 TGGCGGAGTTGATCGAGGAA 61.255 55.000 0.00 0.00 0.00 3.36
2327 6683 1.043116 ATGGCGGAGTTGATCGAGGA 61.043 55.000 0.00 0.00 0.00 3.71
2328 6684 0.877649 CATGGCGGAGTTGATCGAGG 60.878 60.000 0.00 0.00 0.00 4.63
2329 6685 0.877649 CCATGGCGGAGTTGATCGAG 60.878 60.000 0.00 0.00 36.56 4.04
2330 6686 1.143838 CCATGGCGGAGTTGATCGA 59.856 57.895 0.00 0.00 36.56 3.59
2331 6687 1.143838 TCCATGGCGGAGTTGATCG 59.856 57.895 6.96 0.00 39.64 3.69
2332 6688 0.179000 AGTCCATGGCGGAGTTGATC 59.821 55.000 6.96 0.00 46.08 2.92
2333 6689 2.300996 AGTCCATGGCGGAGTTGAT 58.699 52.632 6.96 0.00 46.08 2.57
2334 6690 3.805928 AGTCCATGGCGGAGTTGA 58.194 55.556 6.96 0.00 46.08 3.18
2339 6695 2.668632 GTTGGAGTCCATGGCGGA 59.331 61.111 14.00 0.00 43.61 5.54
2340 6696 2.438434 GGTTGGAGTCCATGGCGG 60.438 66.667 14.00 0.00 31.53 6.13
2341 6697 2.438434 GGGTTGGAGTCCATGGCG 60.438 66.667 14.00 0.00 31.53 5.69
2342 6698 2.043953 GGGGTTGGAGTCCATGGC 60.044 66.667 14.00 6.53 31.53 4.40
2343 6699 2.272146 CGGGGTTGGAGTCCATGG 59.728 66.667 14.00 4.97 31.53 3.66
2344 6700 1.078426 GACGGGGTTGGAGTCCATG 60.078 63.158 14.00 3.64 31.53 3.66
2345 6701 2.656069 CGACGGGGTTGGAGTCCAT 61.656 63.158 14.00 0.00 31.53 3.41
2346 6702 3.307906 CGACGGGGTTGGAGTCCA 61.308 66.667 8.12 8.12 0.00 4.02
2347 6703 4.754667 GCGACGGGGTTGGAGTCC 62.755 72.222 0.73 0.73 0.00 3.85
2348 6704 4.754667 GGCGACGGGGTTGGAGTC 62.755 72.222 0.00 0.00 0.00 3.36
2350 6706 2.040009 ATATGGCGACGGGGTTGGAG 62.040 60.000 0.00 0.00 0.00 3.86
2351 6707 2.067605 ATATGGCGACGGGGTTGGA 61.068 57.895 0.00 0.00 0.00 3.53
2352 6708 1.891919 CATATGGCGACGGGGTTGG 60.892 63.158 0.00 0.00 0.00 3.77
2353 6709 2.542907 GCATATGGCGACGGGGTTG 61.543 63.158 4.56 0.00 0.00 3.77
2354 6710 2.203153 GCATATGGCGACGGGGTT 60.203 61.111 4.56 0.00 0.00 4.11
2355 6711 4.250305 GGCATATGGCGACGGGGT 62.250 66.667 14.11 0.00 46.16 4.95
2356 6712 2.958578 AAAGGCATATGGCGACGGGG 62.959 60.000 22.17 0.00 46.16 5.73
2357 6713 1.525995 AAAGGCATATGGCGACGGG 60.526 57.895 22.17 0.00 46.16 5.28
2358 6714 1.648720 CAAAGGCATATGGCGACGG 59.351 57.895 22.17 10.53 46.16 4.79
2359 6715 1.009675 GCAAAGGCATATGGCGACG 60.010 57.895 22.17 15.18 46.16 5.12
2360 6716 1.360192 GGCAAAGGCATATGGCGAC 59.640 57.895 22.17 13.06 46.16 5.19
2361 6717 1.077140 TGGCAAAGGCATATGGCGA 60.077 52.632 22.17 2.75 46.16 5.54
2362 6718 1.066257 GTGGCAAAGGCATATGGCG 59.934 57.895 22.17 10.52 46.16 5.69
2363 6719 0.826062 AAGTGGCAAAGGCATATGGC 59.174 50.000 21.09 21.09 43.71 4.40
2364 6720 2.101783 TGAAGTGGCAAAGGCATATGG 58.898 47.619 4.56 0.00 43.71 2.74
2365 6721 3.243636 GGATGAAGTGGCAAAGGCATATG 60.244 47.826 0.00 0.00 43.71 1.78
2366 6722 2.961062 GGATGAAGTGGCAAAGGCATAT 59.039 45.455 0.00 0.00 43.71 1.78
2367 6723 2.378038 GGATGAAGTGGCAAAGGCATA 58.622 47.619 0.00 0.00 43.71 3.14
2368 6724 1.188863 GGATGAAGTGGCAAAGGCAT 58.811 50.000 0.00 0.00 43.71 4.40
2369 6725 1.243342 CGGATGAAGTGGCAAAGGCA 61.243 55.000 0.00 0.00 43.71 4.75
2370 6726 1.508088 CGGATGAAGTGGCAAAGGC 59.492 57.895 0.00 0.00 40.13 4.35
2371 6727 1.508088 GCGGATGAAGTGGCAAAGG 59.492 57.895 0.00 0.00 0.00 3.11
2372 6728 1.135315 CGCGGATGAAGTGGCAAAG 59.865 57.895 0.00 0.00 0.00 2.77
2373 6729 2.976840 GCGCGGATGAAGTGGCAAA 61.977 57.895 8.83 0.00 0.00 3.68
2374 6730 3.430862 GCGCGGATGAAGTGGCAA 61.431 61.111 8.83 0.00 0.00 4.52
2380 6736 4.794648 TTGGGGGCGCGGATGAAG 62.795 66.667 8.83 0.00 0.00 3.02
2381 6737 4.122149 ATTGGGGGCGCGGATGAA 62.122 61.111 8.83 0.00 0.00 2.57
2382 6738 4.873810 CATTGGGGGCGCGGATGA 62.874 66.667 8.83 0.00 0.00 2.92
2388 6744 4.813235 TGTAGGCATTGGGGGCGC 62.813 66.667 0.00 0.00 38.57 6.53
2389 6745 2.828549 GTGTAGGCATTGGGGGCG 60.829 66.667 0.00 0.00 38.57 6.13
2390 6746 2.442087 GGTGTAGGCATTGGGGGC 60.442 66.667 0.00 0.00 0.00 5.80
2391 6747 2.124320 CGGTGTAGGCATTGGGGG 60.124 66.667 0.00 0.00 0.00 5.40
2392 6748 1.001393 AACGGTGTAGGCATTGGGG 60.001 57.895 0.00 0.00 0.00 4.96
2393 6749 1.366111 CGAACGGTGTAGGCATTGGG 61.366 60.000 0.00 0.00 0.00 4.12
2394 6750 1.977594 GCGAACGGTGTAGGCATTGG 61.978 60.000 0.00 0.00 0.00 3.16
2395 6751 1.295357 TGCGAACGGTGTAGGCATTG 61.295 55.000 0.00 0.00 0.00 2.82
2396 6752 0.392461 ATGCGAACGGTGTAGGCATT 60.392 50.000 0.00 0.00 41.19 3.56
2397 6753 0.810031 GATGCGAACGGTGTAGGCAT 60.810 55.000 7.17 7.17 46.14 4.40
2398 6754 1.447140 GATGCGAACGGTGTAGGCA 60.447 57.895 0.00 0.00 38.09 4.75
2399 6755 1.447140 TGATGCGAACGGTGTAGGC 60.447 57.895 0.00 0.00 0.00 3.93
2400 6756 1.082117 GGTGATGCGAACGGTGTAGG 61.082 60.000 0.00 0.00 0.00 3.18
2401 6757 1.410737 CGGTGATGCGAACGGTGTAG 61.411 60.000 0.00 0.00 0.00 2.74
2402 6758 1.444724 CGGTGATGCGAACGGTGTA 60.445 57.895 0.00 0.00 0.00 2.90
2403 6759 2.736995 CGGTGATGCGAACGGTGT 60.737 61.111 0.00 0.00 0.00 4.16
2404 6760 2.726691 GACGGTGATGCGAACGGTG 61.727 63.158 0.00 0.00 31.98 4.94
2405 6761 2.431942 GACGGTGATGCGAACGGT 60.432 61.111 0.00 0.00 34.22 4.83
2406 6762 3.541831 CGACGGTGATGCGAACGG 61.542 66.667 0.00 0.00 0.00 4.44
2407 6763 1.872234 ATCGACGGTGATGCGAACG 60.872 57.895 0.00 0.00 37.60 3.95
2408 6764 1.631072 CATCGACGGTGATGCGAAC 59.369 57.895 0.56 0.00 39.33 3.95
2409 6765 4.086860 CATCGACGGTGATGCGAA 57.913 55.556 0.56 0.00 39.33 4.70
2413 6769 3.630148 GCGGCATCGACGGTGATG 61.630 66.667 13.40 13.09 46.78 3.07
2414 6770 4.891727 GGCGGCATCGACGGTGAT 62.892 66.667 13.40 0.00 39.00 3.06
2420 6776 0.666577 GTATAGGTGGCGGCATCGAC 60.667 60.000 17.19 12.00 46.45 4.20
2421 6777 1.663739 GTATAGGTGGCGGCATCGA 59.336 57.895 17.19 12.17 39.00 3.59
2422 6778 1.733041 CGTATAGGTGGCGGCATCG 60.733 63.158 17.19 9.75 39.81 3.84
2423 6779 0.666577 GTCGTATAGGTGGCGGCATC 60.667 60.000 17.19 16.35 0.00 3.91
2424 6780 1.366366 GTCGTATAGGTGGCGGCAT 59.634 57.895 17.19 1.74 0.00 4.40
2425 6781 2.788640 GGTCGTATAGGTGGCGGCA 61.789 63.158 7.97 7.97 31.25 5.69
2426 6782 2.028631 GGTCGTATAGGTGGCGGC 59.971 66.667 0.00 0.00 0.00 6.53
2427 6783 2.188829 TCGGTCGTATAGGTGGCGG 61.189 63.158 0.00 0.00 0.00 6.13
2428 6784 1.009222 GTCGGTCGTATAGGTGGCG 60.009 63.158 0.00 0.00 0.00 5.69
2429 6785 1.009222 CGTCGGTCGTATAGGTGGC 60.009 63.158 0.00 0.00 34.52 5.01
2430 6786 1.009222 GCGTCGGTCGTATAGGTGG 60.009 63.158 0.00 0.00 42.13 4.61
2431 6787 1.368493 CGCGTCGGTCGTATAGGTG 60.368 63.158 0.00 0.00 42.13 4.00
2432 6788 3.017323 CGCGTCGGTCGTATAGGT 58.983 61.111 0.00 0.00 42.13 3.08
2433 6789 2.426425 GCGCGTCGGTCGTATAGG 60.426 66.667 8.43 0.00 42.13 2.57
2434 6790 2.790124 CGCGCGTCGGTCGTATAG 60.790 66.667 24.19 0.00 42.13 1.31
2435 6791 3.563088 ACGCGCGTCGGTCGTATA 61.563 61.111 32.73 0.00 43.86 1.47
2444 6800 4.771356 TAGTCCAGCACGCGCGTC 62.771 66.667 35.61 26.23 45.49 5.19
2447 6803 3.479269 GTGTAGTCCAGCACGCGC 61.479 66.667 5.73 0.00 38.99 6.86
2448 6804 2.809601 GGTGTAGTCCAGCACGCG 60.810 66.667 3.53 3.53 41.31 6.01
2449 6805 2.809601 CGGTGTAGTCCAGCACGC 60.810 66.667 0.00 0.00 41.76 5.34
2450 6806 2.809601 GCGGTGTAGTCCAGCACG 60.810 66.667 0.00 0.00 41.76 5.34
2451 6807 2.434359 GGCGGTGTAGTCCAGCAC 60.434 66.667 0.00 0.00 41.76 4.40
2452 6808 4.063967 CGGCGGTGTAGTCCAGCA 62.064 66.667 0.00 0.00 41.76 4.41
2453 6809 4.814294 CCGGCGGTGTAGTCCAGC 62.814 72.222 19.97 0.00 38.22 4.85
2454 6810 3.066190 TCCGGCGGTGTAGTCCAG 61.066 66.667 27.32 0.00 0.00 3.86
2455 6811 3.376078 GTCCGGCGGTGTAGTCCA 61.376 66.667 27.32 0.00 0.00 4.02
2456 6812 4.139234 GGTCCGGCGGTGTAGTCC 62.139 72.222 27.32 15.04 0.00 3.85
2457 6813 4.487412 CGGTCCGGCGGTGTAGTC 62.487 72.222 27.32 10.15 0.00 2.59
2474 6830 3.334054 AAGAGGGCCTGGTGGAGC 61.334 66.667 12.95 0.00 34.57 4.70
2475 6831 1.614824 AGAAGAGGGCCTGGTGGAG 60.615 63.158 12.95 0.00 34.57 3.86
2476 6832 1.920325 CAGAAGAGGGCCTGGTGGA 60.920 63.158 12.95 0.00 34.57 4.02
2477 6833 1.783250 AACAGAAGAGGGCCTGGTGG 61.783 60.000 12.95 0.00 34.85 4.61
2478 6834 0.322008 GAACAGAAGAGGGCCTGGTG 60.322 60.000 12.95 5.01 34.85 4.17
2479 6835 1.492993 GGAACAGAAGAGGGCCTGGT 61.493 60.000 12.95 0.00 34.85 4.00
2480 6836 1.301293 GGAACAGAAGAGGGCCTGG 59.699 63.158 12.95 0.00 34.85 4.45
2481 6837 1.078848 CGGAACAGAAGAGGGCCTG 60.079 63.158 12.95 0.00 36.53 4.85
2482 6838 2.294078 CCGGAACAGAAGAGGGCCT 61.294 63.158 5.25 5.25 0.00 5.19
2483 6839 2.269241 CCGGAACAGAAGAGGGCC 59.731 66.667 0.00 0.00 0.00 5.80
2484 6840 1.079057 GACCGGAACAGAAGAGGGC 60.079 63.158 9.46 0.00 0.00 5.19
2485 6841 1.215647 CGACCGGAACAGAAGAGGG 59.784 63.158 9.46 0.00 0.00 4.30
2486 6842 1.215647 CCGACCGGAACAGAAGAGG 59.784 63.158 9.46 0.00 37.50 3.69
2487 6843 1.215647 CCCGACCGGAACAGAAGAG 59.784 63.158 9.46 0.00 37.50 2.85
2488 6844 2.280552 CCCCGACCGGAACAGAAGA 61.281 63.158 9.46 0.00 37.50 2.87
2489 6845 2.264794 CCCCGACCGGAACAGAAG 59.735 66.667 9.46 0.00 37.50 2.85
2490 6846 4.011517 GCCCCGACCGGAACAGAA 62.012 66.667 9.46 0.00 37.50 3.02
2508 6864 4.856801 CTGGTTCCCATCCCCGCG 62.857 72.222 0.00 0.00 30.82 6.46
2509 6865 3.407967 TCTGGTTCCCATCCCCGC 61.408 66.667 0.00 0.00 30.82 6.13
2510 6866 2.297895 TGTCTGGTTCCCATCCCCG 61.298 63.158 0.00 0.00 30.82 5.73
2511 6867 1.303282 GTGTCTGGTTCCCATCCCC 59.697 63.158 0.00 0.00 30.82 4.81
2512 6868 1.303282 GGTGTCTGGTTCCCATCCC 59.697 63.158 0.00 0.00 30.82 3.85
2513 6869 1.303282 GGGTGTCTGGTTCCCATCC 59.697 63.158 0.00 0.00 40.79 3.51
2514 6870 1.208165 AGGGGTGTCTGGTTCCCATC 61.208 60.000 0.00 0.00 42.71 3.51
2515 6871 1.151587 AGGGGTGTCTGGTTCCCAT 60.152 57.895 0.00 0.00 42.71 4.00
2516 6872 2.153401 CAGGGGTGTCTGGTTCCCA 61.153 63.158 0.00 0.00 42.71 4.37
2517 6873 1.846124 TCAGGGGTGTCTGGTTCCC 60.846 63.158 0.00 0.00 40.41 3.97
2518 6874 1.375326 GTCAGGGGTGTCTGGTTCC 59.625 63.158 0.00 0.00 35.58 3.62
2519 6875 1.004918 CGTCAGGGGTGTCTGGTTC 60.005 63.158 0.00 0.00 35.58 3.62
2520 6876 2.516888 CCGTCAGGGGTGTCTGGTT 61.517 63.158 0.00 0.00 35.58 3.67
2521 6877 2.923035 CCGTCAGGGGTGTCTGGT 60.923 66.667 0.00 0.00 35.58 4.00
2522 6878 4.394712 GCCGTCAGGGGTGTCTGG 62.395 72.222 0.00 0.00 38.20 3.86
2523 6879 4.394712 GGCCGTCAGGGGTGTCTG 62.395 72.222 0.00 0.00 38.20 3.51
2524 6880 4.954118 TGGCCGTCAGGGGTGTCT 62.954 66.667 0.00 0.00 38.20 3.41
2525 6881 3.948719 TTGGCCGTCAGGGGTGTC 61.949 66.667 0.00 0.00 38.20 3.67
2526 6882 4.265056 GTTGGCCGTCAGGGGTGT 62.265 66.667 0.00 0.00 38.20 4.16
2529 6885 4.722700 CAGGTTGGCCGTCAGGGG 62.723 72.222 0.00 0.00 40.50 4.79
2531 6887 4.641645 TGCAGGTTGGCCGTCAGG 62.642 66.667 0.00 0.00 40.50 3.86
2532 6888 3.052082 CTGCAGGTTGGCCGTCAG 61.052 66.667 5.57 0.00 40.50 3.51
2538 6894 3.982241 AAAGCGCTGCAGGTTGGC 61.982 61.111 12.58 0.00 31.63 4.52
2539 6895 2.049802 CAAAGCGCTGCAGGTTGG 60.050 61.111 12.58 0.00 31.63 3.77
2540 6896 1.659335 CACAAAGCGCTGCAGGTTG 60.659 57.895 12.58 14.39 31.63 3.77
2541 6897 2.723746 CACAAAGCGCTGCAGGTT 59.276 55.556 12.58 0.00 0.00 3.50
2542 6898 3.289834 CCACAAAGCGCTGCAGGT 61.290 61.111 12.58 3.89 0.00 4.00
2543 6899 4.047059 CCCACAAAGCGCTGCAGG 62.047 66.667 12.58 11.23 0.00 4.85
2544 6900 4.047059 CCCCACAAAGCGCTGCAG 62.047 66.667 12.58 10.11 0.00 4.41
2547 6903 3.346631 GATGCCCCACAAAGCGCTG 62.347 63.158 12.58 1.84 0.00 5.18
2548 6904 3.064324 GATGCCCCACAAAGCGCT 61.064 61.111 2.64 2.64 0.00 5.92
2549 6905 4.481112 CGATGCCCCACAAAGCGC 62.481 66.667 0.00 0.00 0.00 5.92
2550 6906 4.481112 GCGATGCCCCACAAAGCG 62.481 66.667 0.00 0.00 0.00 4.68
2551 6907 4.481112 CGCGATGCCCCACAAAGC 62.481 66.667 0.00 0.00 0.00 3.51
2552 6908 3.814268 CCGCGATGCCCCACAAAG 61.814 66.667 8.23 0.00 0.00 2.77
2560 6916 3.322706 AAAACGAAGCCGCGATGCC 62.323 57.895 8.23 0.00 39.95 4.40
2561 6917 1.863446 GAAAACGAAGCCGCGATGC 60.863 57.895 8.23 2.58 39.95 3.91
2562 6918 1.226018 GGAAAACGAAGCCGCGATG 60.226 57.895 8.23 0.00 39.95 3.84
2563 6919 1.669760 TGGAAAACGAAGCCGCGAT 60.670 52.632 8.23 0.00 39.95 4.58
2564 6920 2.280254 TGGAAAACGAAGCCGCGA 60.280 55.556 8.23 0.00 39.95 5.87
2565 6921 2.127383 GTGGAAAACGAAGCCGCG 60.127 61.111 0.00 0.00 39.95 6.46
2566 6922 1.862602 ATGGTGGAAAACGAAGCCGC 61.863 55.000 0.00 0.00 39.95 6.53
2567 6923 0.109781 CATGGTGGAAAACGAAGCCG 60.110 55.000 0.00 0.00 42.50 5.52
2568 6924 0.388520 GCATGGTGGAAAACGAAGCC 60.389 55.000 0.00 0.00 0.00 4.35
2569 6925 0.388520 GGCATGGTGGAAAACGAAGC 60.389 55.000 0.00 0.00 31.27 3.86
2570 6926 0.243636 GGGCATGGTGGAAAACGAAG 59.756 55.000 0.00 0.00 0.00 3.79
2571 6927 0.468214 TGGGCATGGTGGAAAACGAA 60.468 50.000 0.00 0.00 0.00 3.85
2572 6928 0.893270 CTGGGCATGGTGGAAAACGA 60.893 55.000 0.00 0.00 0.00 3.85
2573 6929 1.586028 CTGGGCATGGTGGAAAACG 59.414 57.895 0.00 0.00 0.00 3.60
2574 6930 0.831711 ACCTGGGCATGGTGGAAAAC 60.832 55.000 0.00 0.00 36.30 2.43
2575 6931 0.541764 GACCTGGGCATGGTGGAAAA 60.542 55.000 5.38 0.00 38.03 2.29
2576 6932 1.076549 GACCTGGGCATGGTGGAAA 59.923 57.895 5.38 0.00 38.03 3.13
2577 6933 2.763215 GACCTGGGCATGGTGGAA 59.237 61.111 5.38 0.00 38.03 3.53
2578 6934 3.716195 CGACCTGGGCATGGTGGA 61.716 66.667 0.00 0.00 38.03 4.02
2579 6935 3.716195 TCGACCTGGGCATGGTGG 61.716 66.667 0.00 4.79 38.03 4.61


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.