Multiple sequence alignment - TraesCS4A01G431000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G431000 chr4A 100.000 3078 0 0 1 3078 702008133 702011210 0.000000e+00 5685.0
1 TraesCS4A01G431000 chr4A 91.659 1103 58 11 979 2078 709858262 709857191 0.000000e+00 1496.0
2 TraesCS4A01G431000 chr4A 92.149 242 17 2 1 240 709859523 709859282 1.060000e-89 340.0
3 TraesCS4A01G431000 chr4A 92.683 205 14 1 263 467 709859289 709859086 8.350000e-76 294.0
4 TraesCS4A01G431000 chr4A 94.505 182 7 2 463 642 709858786 709858606 8.410000e-71 278.0
5 TraesCS4A01G431000 chr4A 92.000 75 1 1 640 709 709858333 709858259 1.950000e-17 100.0
6 TraesCS4A01G431000 chr4A 96.610 59 2 0 2075 2133 709857074 709857016 7.020000e-17 99.0
7 TraesCS4A01G431000 chr7D 93.288 730 43 4 979 1708 25357155 25356432 0.000000e+00 1072.0
8 TraesCS4A01G431000 chr7D 89.197 722 44 15 1 709 25357852 25357152 0.000000e+00 870.0
9 TraesCS4A01G431000 chr7D 89.680 281 26 3 706 983 125335106 125334826 3.770000e-94 355.0
10 TraesCS4A01G431000 chr7D 81.538 130 24 0 1096 1225 25386320 25386191 1.170000e-19 108.0
11 TraesCS4A01G431000 chr7D 91.935 62 5 0 2134 2195 14252627 14252566 1.520000e-13 87.9
12 TraesCS4A01G431000 chr7A 90.291 721 31 11 991 1708 26318580 26317896 0.000000e+00 907.0
13 TraesCS4A01G431000 chr7A 94.813 482 16 3 2506 2978 690017460 690016979 0.000000e+00 743.0
14 TraesCS4A01G431000 chr7A 89.043 575 50 10 1 566 26319684 26319114 0.000000e+00 701.0
15 TraesCS4A01G431000 chr7A 95.192 416 17 2 2565 2978 578060977 578060563 0.000000e+00 654.0
16 TraesCS4A01G431000 chr7A 89.097 321 35 0 1749 2069 690433979 690434299 1.720000e-107 399.0
17 TraesCS4A01G431000 chr7A 89.418 189 10 5 411 595 26319113 26318931 2.390000e-56 230.0
18 TraesCS4A01G431000 chr7A 93.182 132 8 1 2341 2471 578061377 578061246 3.130000e-45 193.0
19 TraesCS4A01G431000 chr7A 94.828 116 6 0 589 704 26318694 26318579 6.780000e-42 182.0
20 TraesCS4A01G431000 chr6A 95.824 455 18 1 2525 2978 577695145 577694691 0.000000e+00 734.0
21 TraesCS4A01G431000 chr6A 95.824 455 18 1 2525 2978 577712719 577712265 0.000000e+00 734.0
22 TraesCS4A01G431000 chr6A 94.776 134 5 2 2339 2471 577695406 577695274 1.120000e-49 207.0
23 TraesCS4A01G431000 chr6A 94.776 134 5 2 2339 2471 577712980 577712848 1.120000e-49 207.0
24 TraesCS4A01G431000 chr3A 94.363 479 24 3 2506 2984 655805506 655805031 0.000000e+00 732.0
25 TraesCS4A01G431000 chr3A 93.939 132 7 1 2341 2471 658045900 658046031 6.730000e-47 198.0
26 TraesCS4A01G431000 chr5B 93.763 481 20 7 2506 2978 458623345 458622867 0.000000e+00 713.0
27 TraesCS4A01G431000 chr5B 87.423 326 36 4 1747 2071 57100102 57100423 1.350000e-98 370.0
28 TraesCS4A01G431000 chr5B 89.860 286 26 2 702 984 590959692 590959407 6.270000e-97 364.0
29 TraesCS4A01G431000 chr5B 92.308 143 8 3 2341 2482 458623630 458623490 1.870000e-47 200.0
30 TraesCS4A01G431000 chr3B 94.889 450 19 3 2531 2978 590445102 590445549 0.000000e+00 701.0
31 TraesCS4A01G431000 chr3B 87.156 327 37 4 1744 2069 663039296 663039618 1.740000e-97 366.0
32 TraesCS4A01G431000 chr3B 89.964 279 24 3 706 981 407663960 407663683 1.050000e-94 357.0
33 TraesCS4A01G431000 chr3B 89.123 285 28 3 705 986 482394964 482394680 4.880000e-93 351.0
34 TraesCS4A01G431000 chr3B 92.424 132 7 2 2341 2471 590444782 590444911 5.240000e-43 185.0
35 TraesCS4A01G431000 chr7B 91.002 489 22 3 2503 2978 726364152 726364631 9.310000e-180 640.0
36 TraesCS4A01G431000 chr7B 90.714 280 20 5 706 981 620533306 620533029 4.850000e-98 368.0
37 TraesCS4A01G431000 chr7B 94.811 212 11 0 2134 2345 690054703 690054492 6.360000e-87 331.0
38 TraesCS4A01G431000 chr7B 94.634 205 11 0 2141 2345 684465705 684465501 4.950000e-83 318.0
39 TraesCS4A01G431000 chr7B 93.893 131 7 1 2342 2471 726363386 726363516 2.420000e-46 196.0
40 TraesCS4A01G431000 chr7B 90.099 101 3 1 2978 3078 684465514 684465421 1.160000e-24 124.0
41 TraesCS4A01G431000 chr7B 100.000 37 0 0 2470 2506 726363776 726363812 5.510000e-08 69.4
42 TraesCS4A01G431000 chr2A 95.550 382 15 2 2520 2900 762725762 762725382 7.300000e-171 610.0
43 TraesCS4A01G431000 chr5A 93.548 372 15 1 2503 2874 608441258 608441620 2.090000e-151 545.0
44 TraesCS4A01G431000 chr5A 93.939 132 7 1 2341 2471 608438394 608438525 6.730000e-47 198.0
45 TraesCS4A01G431000 chr5A 88.667 150 15 2 2133 2280 512583366 512583515 6.780000e-42 182.0
46 TraesCS4A01G431000 chr5A 97.297 37 1 0 2470 2506 608438792 608438828 2.560000e-06 63.9
47 TraesCS4A01G431000 chr1D 90.432 324 30 1 1748 2071 481307713 481308035 2.840000e-115 425.0
48 TraesCS4A01G431000 chr1D 89.815 324 32 1 1748 2071 481140910 481141232 6.140000e-112 414.0
49 TraesCS4A01G431000 chr2B 88.252 349 38 3 1724 2071 106463292 106463638 6.140000e-112 414.0
50 TraesCS4A01G431000 chr5D 88.923 325 36 0 1747 2071 391744616 391744940 4.780000e-108 401.0
51 TraesCS4A01G431000 chr5D 87.578 322 36 3 1750 2069 480753794 480753475 1.350000e-98 370.0
52 TraesCS4A01G431000 chrUn 91.039 279 22 2 706 981 9753388 9753110 1.040000e-99 374.0
53 TraesCS4A01G431000 chrUn 89.964 279 25 3 706 981 108701363 108701085 1.050000e-94 357.0
54 TraesCS4A01G431000 chrUn 93.130 131 8 1 2342 2471 330579816 330579946 1.130000e-44 191.0
55 TraesCS4A01G431000 chr3D 90.182 275 24 3 708 979 505973685 505973411 3.770000e-94 355.0
56 TraesCS4A01G431000 chr6D 88.850 287 28 4 696 979 15786075 15786360 1.760000e-92 350.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G431000 chr4A 702008133 702011210 3077 False 5685.000000 5685 100.000000 1 3078 1 chr4A.!!$F1 3077
1 TraesCS4A01G431000 chr4A 709857016 709859523 2507 True 434.500000 1496 93.267667 1 2133 6 chr4A.!!$R1 2132
2 TraesCS4A01G431000 chr7D 25356432 25357852 1420 True 971.000000 1072 91.242500 1 1708 2 chr7D.!!$R4 1707
3 TraesCS4A01G431000 chr7A 26317896 26319684 1788 True 505.000000 907 90.895000 1 1708 4 chr7A.!!$R2 1707
4 TraesCS4A01G431000 chr7A 578060563 578061377 814 True 423.500000 654 94.187000 2341 2978 2 chr7A.!!$R3 637
5 TraesCS4A01G431000 chr6A 577694691 577695406 715 True 470.500000 734 95.300000 2339 2978 2 chr6A.!!$R1 639
6 TraesCS4A01G431000 chr6A 577712265 577712980 715 True 470.500000 734 95.300000 2339 2978 2 chr6A.!!$R2 639
7 TraesCS4A01G431000 chr5B 458622867 458623630 763 True 456.500000 713 93.035500 2341 2978 2 chr5B.!!$R2 637
8 TraesCS4A01G431000 chr3B 590444782 590445549 767 False 443.000000 701 93.656500 2341 2978 2 chr3B.!!$F2 637
9 TraesCS4A01G431000 chr7B 726363386 726364631 1245 False 301.800000 640 94.965000 2342 2978 3 chr7B.!!$F1 636
10 TraesCS4A01G431000 chr5A 608438394 608441620 3226 False 268.966667 545 94.928000 2341 2874 3 chr5A.!!$F2 533

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
977 1979 0.035056 ACTTGCCACTATGACCAGCC 60.035 55.0 0.0 0.0 0.0 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2175 3315 0.033011 ACATGCTAGAGGACGGGTCT 60.033 55.0 0.0 0.0 0.0 3.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
122 124 4.214545 CGTGCAACCAAACACCTTCTATTA 59.785 41.667 0.00 0.00 33.09 0.98
192 198 6.813293 TGTCCTGATCCATTCTTATTCTGA 57.187 37.500 0.00 0.00 0.00 3.27
195 201 6.928492 GTCCTGATCCATTCTTATTCTGAGTC 59.072 42.308 0.00 0.00 0.00 3.36
197 203 6.930164 CCTGATCCATTCTTATTCTGAGTCTG 59.070 42.308 0.00 0.00 0.00 3.51
214 220 3.193691 AGTCTGTAGAATCCTGTGAACCG 59.806 47.826 0.00 0.00 0.00 4.44
237 244 4.013267 AGAGACCCAAGTTGATTGTCAG 57.987 45.455 16.99 0.00 37.17 3.51
249 256 6.906659 AGTTGATTGTCAGATTCATGTGTTC 58.093 36.000 0.00 0.00 0.00 3.18
278 285 7.921786 TCTTAAACTGTGGGATCAAATGTAG 57.078 36.000 0.00 0.00 0.00 2.74
285 292 3.377172 GTGGGATCAAATGTAGTTTCCCG 59.623 47.826 0.00 0.00 35.23 5.14
290 297 1.129811 CAAATGTAGTTTCCCGCCGTC 59.870 52.381 0.00 0.00 0.00 4.79
293 300 2.604079 TAGTTTCCCGCCGTCCCA 60.604 61.111 0.00 0.00 0.00 4.37
319 326 4.692228 TGCTCCAATCCTTTGAAAAACAC 58.308 39.130 0.00 0.00 34.60 3.32
334 341 2.325583 AACACATGAGTGGTGTCGTT 57.674 45.000 0.00 0.00 45.92 3.85
338 345 5.543714 AACACATGAGTGGTGTCGTTATAA 58.456 37.500 0.00 0.00 45.92 0.98
484 803 7.246698 GGAGATCCAAGCCAAAAGCAGAAAA 62.247 44.000 0.00 0.00 39.15 2.29
503 824 3.795688 AAGAAAGTCTGCCAGGAATCA 57.204 42.857 0.00 0.00 0.00 2.57
540 863 4.679373 AGTACTATCCCTGCATGTCAAG 57.321 45.455 0.00 0.00 0.00 3.02
557 880 4.340666 TGTCAAGTTTGTAACATGCATGGT 59.659 37.500 29.41 26.41 30.62 3.55
617 1337 4.717233 ATATGCACTCATCGATCCTCTC 57.283 45.455 0.00 0.00 34.22 3.20
623 1343 0.665298 TCATCGATCCTCTCTGCACG 59.335 55.000 0.00 0.00 0.00 5.34
709 1711 6.094186 TCAGTACATGATCGCTAGCTATAAGG 59.906 42.308 13.93 4.86 31.12 2.69
710 1712 4.116747 ACATGATCGCTAGCTATAAGGC 57.883 45.455 13.93 0.00 0.00 4.35
711 1713 3.766591 ACATGATCGCTAGCTATAAGGCT 59.233 43.478 13.93 0.00 45.29 4.58
712 1714 3.857549 TGATCGCTAGCTATAAGGCTG 57.142 47.619 13.93 0.00 43.01 4.85
713 1715 2.493675 TGATCGCTAGCTATAAGGCTGG 59.506 50.000 13.93 0.00 43.01 4.85
719 1721 4.399004 CTAGCTATAAGGCTGGCCATAG 57.601 50.000 5.51 4.99 43.01 2.23
720 1722 2.625639 AGCTATAAGGCTGGCCATAGT 58.374 47.619 5.51 0.00 41.43 2.12
721 1723 2.304180 AGCTATAAGGCTGGCCATAGTG 59.696 50.000 5.51 0.00 41.43 2.74
722 1724 2.616510 GCTATAAGGCTGGCCATAGTGG 60.617 54.545 5.51 0.00 41.55 4.00
723 1725 0.773644 ATAAGGCTGGCCATAGTGGG 59.226 55.000 5.51 0.00 38.19 4.61
724 1726 0.327095 TAAGGCTGGCCATAGTGGGA 60.327 55.000 5.51 0.00 38.19 4.37
725 1727 1.639635 AAGGCTGGCCATAGTGGGAG 61.640 60.000 5.51 0.00 38.19 4.30
726 1728 2.378634 GGCTGGCCATAGTGGGAGT 61.379 63.158 5.51 0.00 38.19 3.85
727 1729 1.054406 GGCTGGCCATAGTGGGAGTA 61.054 60.000 5.51 0.00 38.19 2.59
728 1730 0.837272 GCTGGCCATAGTGGGAGTAA 59.163 55.000 5.51 0.00 38.19 2.24
729 1731 1.475213 GCTGGCCATAGTGGGAGTAAC 60.475 57.143 5.51 0.00 38.19 2.50
730 1732 1.837439 CTGGCCATAGTGGGAGTAACA 59.163 52.381 5.51 0.00 38.19 2.41
731 1733 2.439507 CTGGCCATAGTGGGAGTAACAT 59.560 50.000 5.51 0.00 38.19 2.71
732 1734 3.646162 CTGGCCATAGTGGGAGTAACATA 59.354 47.826 5.51 0.00 38.19 2.29
733 1735 4.041464 TGGCCATAGTGGGAGTAACATAA 58.959 43.478 0.00 0.00 38.19 1.90
734 1736 4.663120 TGGCCATAGTGGGAGTAACATAAT 59.337 41.667 0.00 0.00 38.19 1.28
735 1737 5.133660 TGGCCATAGTGGGAGTAACATAATT 59.866 40.000 0.00 0.00 38.19 1.40
736 1738 6.330514 TGGCCATAGTGGGAGTAACATAATTA 59.669 38.462 0.00 0.00 38.19 1.40
737 1739 6.879458 GGCCATAGTGGGAGTAACATAATTAG 59.121 42.308 0.00 0.00 38.19 1.73
738 1740 7.450903 GCCATAGTGGGAGTAACATAATTAGT 58.549 38.462 0.00 0.00 38.19 2.24
739 1741 8.591072 GCCATAGTGGGAGTAACATAATTAGTA 58.409 37.037 0.00 0.00 38.19 1.82
745 1747 8.936864 GTGGGAGTAACATAATTAGTATCATGC 58.063 37.037 0.00 0.00 0.00 4.06
746 1748 8.655901 TGGGAGTAACATAATTAGTATCATGCA 58.344 33.333 0.00 0.00 0.00 3.96
747 1749 8.936864 GGGAGTAACATAATTAGTATCATGCAC 58.063 37.037 0.00 0.00 0.00 4.57
748 1750 9.712305 GGAGTAACATAATTAGTATCATGCACT 57.288 33.333 0.00 5.31 0.00 4.40
753 1755 9.836864 AACATAATTAGTATCATGCACTTGAGA 57.163 29.630 5.29 0.00 0.00 3.27
754 1756 9.265901 ACATAATTAGTATCATGCACTTGAGAC 57.734 33.333 6.92 6.92 37.96 3.36
755 1757 9.486497 CATAATTAGTATCATGCACTTGAGACT 57.514 33.333 18.62 18.62 46.72 3.24
756 1758 9.703892 ATAATTAGTATCATGCACTTGAGACTC 57.296 33.333 18.25 0.00 42.87 3.36
757 1759 4.039151 AGTATCATGCACTTGAGACTCG 57.961 45.455 10.98 0.00 42.87 4.18
758 1760 1.649664 ATCATGCACTTGAGACTCGC 58.350 50.000 0.00 0.00 0.00 5.03
759 1761 0.318120 TCATGCACTTGAGACTCGCA 59.682 50.000 5.40 5.40 36.95 5.10
760 1762 1.150827 CATGCACTTGAGACTCGCAA 58.849 50.000 6.82 0.00 35.98 4.85
761 1763 1.532437 CATGCACTTGAGACTCGCAAA 59.468 47.619 6.82 0.00 35.98 3.68
762 1764 0.937304 TGCACTTGAGACTCGCAAAC 59.063 50.000 0.00 0.00 0.00 2.93
763 1765 0.937304 GCACTTGAGACTCGCAAACA 59.063 50.000 0.00 0.00 0.00 2.83
764 1766 1.532868 GCACTTGAGACTCGCAAACAT 59.467 47.619 0.00 0.00 0.00 2.71
765 1767 2.736721 GCACTTGAGACTCGCAAACATA 59.263 45.455 0.00 0.00 0.00 2.29
766 1768 3.423645 GCACTTGAGACTCGCAAACATAC 60.424 47.826 0.00 0.00 0.00 2.39
767 1769 3.990469 CACTTGAGACTCGCAAACATACT 59.010 43.478 0.00 0.00 0.00 2.12
768 1770 4.449068 CACTTGAGACTCGCAAACATACTT 59.551 41.667 0.00 0.00 0.00 2.24
769 1771 5.633601 CACTTGAGACTCGCAAACATACTTA 59.366 40.000 0.00 0.00 0.00 2.24
770 1772 6.311445 CACTTGAGACTCGCAAACATACTTAT 59.689 38.462 0.00 0.00 0.00 1.73
771 1773 6.311445 ACTTGAGACTCGCAAACATACTTATG 59.689 38.462 0.00 0.00 39.55 1.90
773 1775 5.576774 TGAGACTCGCAAACATACTTATGTG 59.423 40.000 2.62 0.00 45.55 3.21
774 1776 4.870426 AGACTCGCAAACATACTTATGTGG 59.130 41.667 2.62 0.80 45.55 4.17
775 1777 3.374058 ACTCGCAAACATACTTATGTGGC 59.626 43.478 12.82 12.82 45.55 5.01
776 1778 3.339141 TCGCAAACATACTTATGTGGCA 58.661 40.909 18.76 0.00 45.55 4.92
777 1779 3.373748 TCGCAAACATACTTATGTGGCAG 59.626 43.478 18.76 13.80 45.55 4.85
778 1780 3.373748 CGCAAACATACTTATGTGGCAGA 59.626 43.478 18.76 0.00 45.55 4.26
779 1781 4.662145 GCAAACATACTTATGTGGCAGAC 58.338 43.478 15.95 0.00 45.55 3.51
780 1782 4.155826 GCAAACATACTTATGTGGCAGACA 59.844 41.667 15.95 0.00 45.55 3.41
781 1783 5.335583 GCAAACATACTTATGTGGCAGACAA 60.336 40.000 15.95 0.00 45.55 3.18
782 1784 6.625740 GCAAACATACTTATGTGGCAGACAAT 60.626 38.462 15.95 0.00 45.55 2.71
783 1785 7.315142 CAAACATACTTATGTGGCAGACAATT 58.685 34.615 2.62 0.00 45.55 2.32
784 1786 8.458052 CAAACATACTTATGTGGCAGACAATTA 58.542 33.333 2.62 0.00 45.55 1.40
785 1787 8.574251 AACATACTTATGTGGCAGACAATTAA 57.426 30.769 2.62 0.00 45.55 1.40
786 1788 8.574251 ACATACTTATGTGGCAGACAATTAAA 57.426 30.769 0.94 0.00 44.66 1.52
787 1789 8.677300 ACATACTTATGTGGCAGACAATTAAAG 58.323 33.333 0.94 0.00 44.66 1.85
788 1790 8.892723 CATACTTATGTGGCAGACAATTAAAGA 58.107 33.333 0.00 0.00 38.36 2.52
789 1791 7.759489 ACTTATGTGGCAGACAATTAAAGAA 57.241 32.000 0.00 0.00 38.36 2.52
790 1792 7.820648 ACTTATGTGGCAGACAATTAAAGAAG 58.179 34.615 0.00 0.00 38.36 2.85
791 1793 7.665559 ACTTATGTGGCAGACAATTAAAGAAGA 59.334 33.333 0.00 0.00 38.36 2.87
792 1794 6.899393 ATGTGGCAGACAATTAAAGAAGAA 57.101 33.333 0.00 0.00 38.36 2.52
793 1795 6.707440 TGTGGCAGACAATTAAAGAAGAAA 57.293 33.333 0.00 0.00 0.00 2.52
794 1796 6.738114 TGTGGCAGACAATTAAAGAAGAAAG 58.262 36.000 0.00 0.00 0.00 2.62
795 1797 6.545666 TGTGGCAGACAATTAAAGAAGAAAGA 59.454 34.615 0.00 0.00 0.00 2.52
796 1798 7.080724 GTGGCAGACAATTAAAGAAGAAAGAG 58.919 38.462 0.00 0.00 0.00 2.85
797 1799 6.998074 TGGCAGACAATTAAAGAAGAAAGAGA 59.002 34.615 0.00 0.00 0.00 3.10
798 1800 7.667219 TGGCAGACAATTAAAGAAGAAAGAGAT 59.333 33.333 0.00 0.00 0.00 2.75
799 1801 7.967303 GGCAGACAATTAAAGAAGAAAGAGATG 59.033 37.037 0.00 0.00 0.00 2.90
800 1802 7.967303 GCAGACAATTAAAGAAGAAAGAGATGG 59.033 37.037 0.00 0.00 0.00 3.51
801 1803 7.967303 CAGACAATTAAAGAAGAAAGAGATGGC 59.033 37.037 0.00 0.00 0.00 4.40
802 1804 7.667219 AGACAATTAAAGAAGAAAGAGATGGCA 59.333 33.333 0.00 0.00 0.00 4.92
803 1805 8.181904 ACAATTAAAGAAGAAAGAGATGGCAA 57.818 30.769 0.00 0.00 0.00 4.52
804 1806 8.810041 ACAATTAAAGAAGAAAGAGATGGCAAT 58.190 29.630 0.00 0.00 0.00 3.56
807 1809 9.692325 ATTAAAGAAGAAAGAGATGGCAATAGT 57.308 29.630 0.00 0.00 0.00 2.12
810 1812 8.499403 AAGAAGAAAGAGATGGCAATAGTAAC 57.501 34.615 0.00 0.00 0.00 2.50
811 1813 7.624549 AGAAGAAAGAGATGGCAATAGTAACA 58.375 34.615 0.00 0.00 0.00 2.41
812 1814 8.270744 AGAAGAAAGAGATGGCAATAGTAACAT 58.729 33.333 0.00 0.00 0.00 2.71
813 1815 9.547753 GAAGAAAGAGATGGCAATAGTAACATA 57.452 33.333 0.00 0.00 0.00 2.29
814 1816 9.553064 AAGAAAGAGATGGCAATAGTAACATAG 57.447 33.333 0.00 0.00 0.00 2.23
815 1817 8.928448 AGAAAGAGATGGCAATAGTAACATAGA 58.072 33.333 0.00 0.00 0.00 1.98
816 1818 9.547753 GAAAGAGATGGCAATAGTAACATAGAA 57.452 33.333 0.00 0.00 0.00 2.10
821 1823 9.935241 AGATGGCAATAGTAACATAGAATACTG 57.065 33.333 0.00 0.00 34.37 2.74
822 1824 9.712305 GATGGCAATAGTAACATAGAATACTGT 57.288 33.333 0.00 0.00 34.37 3.55
857 1859 8.675705 AATGTTATGCTACTATGTGTTATGCA 57.324 30.769 0.00 0.00 34.61 3.96
858 1860 8.853077 ATGTTATGCTACTATGTGTTATGCAT 57.147 30.769 3.79 3.79 39.83 3.96
859 1861 8.086851 TGTTATGCTACTATGTGTTATGCATG 57.913 34.615 10.16 0.00 38.39 4.06
860 1862 7.173047 TGTTATGCTACTATGTGTTATGCATGG 59.827 37.037 10.16 0.00 38.39 3.66
861 1863 5.034852 TGCTACTATGTGTTATGCATGGT 57.965 39.130 10.16 0.00 40.35 3.55
862 1864 6.168270 TGCTACTATGTGTTATGCATGGTA 57.832 37.500 10.16 0.00 38.62 3.25
863 1865 6.587273 TGCTACTATGTGTTATGCATGGTAA 58.413 36.000 10.16 0.00 38.93 2.85
864 1866 7.223584 TGCTACTATGTGTTATGCATGGTAAT 58.776 34.615 10.16 0.00 38.93 1.89
865 1867 8.371699 TGCTACTATGTGTTATGCATGGTAATA 58.628 33.333 10.16 0.60 38.93 0.98
866 1868 9.214957 GCTACTATGTGTTATGCATGGTAATAA 57.785 33.333 10.16 0.00 38.93 1.40
874 1876 9.893305 GTGTTATGCATGGTAATAAATTAGACC 57.107 33.333 10.16 1.15 0.00 3.85
875 1877 9.634021 TGTTATGCATGGTAATAAATTAGACCA 57.366 29.630 10.16 10.74 0.00 4.02
973 1975 8.848474 ATTATATGTTACTTGCCACTATGACC 57.152 34.615 0.00 0.00 0.00 4.02
974 1976 4.568072 ATGTTACTTGCCACTATGACCA 57.432 40.909 0.00 0.00 0.00 4.02
975 1977 3.937814 TGTTACTTGCCACTATGACCAG 58.062 45.455 0.00 0.00 0.00 4.00
976 1978 2.678336 GTTACTTGCCACTATGACCAGC 59.322 50.000 0.00 0.00 0.00 4.85
977 1979 0.035056 ACTTGCCACTATGACCAGCC 60.035 55.000 0.00 0.00 0.00 4.85
978 1980 0.254178 CTTGCCACTATGACCAGCCT 59.746 55.000 0.00 0.00 0.00 4.58
979 1981 1.486310 CTTGCCACTATGACCAGCCTA 59.514 52.381 0.00 0.00 0.00 3.93
980 1982 1.578897 TGCCACTATGACCAGCCTAA 58.421 50.000 0.00 0.00 0.00 2.69
981 1983 1.486310 TGCCACTATGACCAGCCTAAG 59.514 52.381 0.00 0.00 0.00 2.18
1048 2050 1.796459 GTTCACACTCGGCGTACAATT 59.204 47.619 6.85 0.00 0.00 2.32
1088 2090 2.225019 CACACTTCACAGTTCATCCTGC 59.775 50.000 0.00 0.00 35.83 4.85
1175 2186 1.767759 GCCATGCTGGTCATACCTTT 58.232 50.000 0.00 0.00 40.46 3.11
1190 2201 3.883744 CTTTGTCGGGCCGCTGTCT 62.884 63.158 23.83 0.00 0.00 3.41
1272 2283 3.323758 GATACCACCGGTGCCAGCA 62.324 63.158 29.75 11.35 36.19 4.41
1354 2365 1.847798 TTCGTTGTGCATAGCCCCCT 61.848 55.000 0.00 0.00 0.00 4.79
1355 2366 1.819632 CGTTGTGCATAGCCCCCTC 60.820 63.158 0.00 0.00 0.00 4.30
1411 2422 0.882042 CTGCGACAAGTGCAAGACCT 60.882 55.000 0.00 0.00 42.70 3.85
1595 2609 0.255890 AAGTGCAATGGGCCGTAGAT 59.744 50.000 0.00 0.00 43.89 1.98
1716 2734 5.405063 AGCTTTAGTATCTACTCCCTCCA 57.595 43.478 0.00 0.00 37.73 3.86
1757 2777 7.467623 ATGTTTTTCGACATTAAGAGCATCTC 58.532 34.615 0.00 0.00 40.28 2.75
1795 2815 2.757056 GGGCCGCGCGTTAAAATCT 61.757 57.895 29.95 0.00 0.00 2.40
1863 2883 0.109964 GCGCGCACAAAATAGTTGGA 60.110 50.000 29.10 0.00 0.00 3.53
1907 2927 2.667473 AGCTGCAAATTTGAGGCATC 57.333 45.000 26.04 13.68 36.87 3.91
1909 2929 1.917273 CTGCAAATTTGAGGCATCGG 58.083 50.000 22.31 4.17 36.87 4.18
1911 2931 1.202114 TGCAAATTTGAGGCATCGGAC 59.798 47.619 22.31 0.55 31.58 4.79
1932 2952 1.198867 TGTGCGCGCTTCACAATTTAT 59.801 42.857 33.29 0.00 41.01 1.40
1936 2956 5.201910 GTGCGCGCTTCACAATTTATATTA 58.798 37.500 33.29 1.49 34.73 0.98
1937 2957 5.113529 GTGCGCGCTTCACAATTTATATTAC 59.886 40.000 33.29 11.61 34.73 1.89
1977 2997 3.457234 GGTTTTGGGCATATGCTAAAGC 58.543 45.455 26.12 24.28 41.70 3.51
2024 3044 1.136057 GCTACAGTGGTGCGCTAAAAC 60.136 52.381 9.73 0.00 0.00 2.43
2133 3273 1.567504 AGGAATACGTGCGGAAATCG 58.432 50.000 0.00 0.00 42.76 3.34
2134 3274 0.580104 GGAATACGTGCGGAAATCGG 59.420 55.000 0.00 0.00 39.69 4.18
2135 3275 1.563111 GAATACGTGCGGAAATCGGA 58.437 50.000 0.00 0.00 39.69 4.55
2136 3276 2.132762 GAATACGTGCGGAAATCGGAT 58.867 47.619 0.00 0.00 42.17 4.18
2137 3277 3.311106 GAATACGTGCGGAAATCGGATA 58.689 45.455 0.00 0.00 42.17 2.59
2138 3278 3.587797 ATACGTGCGGAAATCGGATAT 57.412 42.857 0.00 0.00 42.17 1.63
2139 3279 1.779569 ACGTGCGGAAATCGGATATC 58.220 50.000 0.00 0.00 42.17 1.63
2140 3280 1.068474 CGTGCGGAAATCGGATATCC 58.932 55.000 12.14 12.14 42.17 2.59
2141 3281 1.604438 CGTGCGGAAATCGGATATCCA 60.604 52.381 21.70 9.21 42.17 3.41
2142 3282 2.699954 GTGCGGAAATCGGATATCCAT 58.300 47.619 21.70 11.05 42.17 3.41
2143 3283 3.074412 GTGCGGAAATCGGATATCCATT 58.926 45.455 21.70 15.81 42.17 3.16
2144 3284 3.502211 GTGCGGAAATCGGATATCCATTT 59.498 43.478 21.70 21.86 42.17 2.32
2145 3285 3.751175 TGCGGAAATCGGATATCCATTTC 59.249 43.478 29.13 29.13 39.73 2.17
2146 3286 4.003648 GCGGAAATCGGATATCCATTTCT 58.996 43.478 31.81 17.17 39.99 2.52
2147 3287 4.142816 GCGGAAATCGGATATCCATTTCTG 60.143 45.833 33.05 33.05 43.38 3.02
2148 3288 5.237815 CGGAAATCGGATATCCATTTCTGA 58.762 41.667 33.43 21.16 43.31 3.27
2149 3289 5.349817 CGGAAATCGGATATCCATTTCTGAG 59.650 44.000 33.43 26.08 43.31 3.35
2150 3290 5.123027 GGAAATCGGATATCCATTTCTGAGC 59.877 44.000 31.81 22.36 39.99 4.26
2151 3291 5.495926 AATCGGATATCCATTTCTGAGCT 57.504 39.130 21.70 0.00 35.14 4.09
2152 3292 4.527509 TCGGATATCCATTTCTGAGCTC 57.472 45.455 21.70 6.82 35.14 4.09
2153 3293 3.057245 TCGGATATCCATTTCTGAGCTCG 60.057 47.826 21.70 4.19 35.14 5.03
2154 3294 3.057245 CGGATATCCATTTCTGAGCTCGA 60.057 47.826 21.70 6.70 35.14 4.04
2155 3295 4.493547 GGATATCCATTTCTGAGCTCGAG 58.506 47.826 17.34 8.45 35.64 4.04
2156 3296 2.237393 ATCCATTTCTGAGCTCGAGC 57.763 50.000 30.01 30.01 42.49 5.03
2157 3297 7.300522 GGATATCCATTTCTGAGCTCGAGCT 62.301 48.000 38.87 38.87 45.03 4.09
2174 3314 3.767902 AGCTCAGATGCTCCCTAAATC 57.232 47.619 0.00 0.00 39.34 2.17
2175 3315 3.044156 AGCTCAGATGCTCCCTAAATCA 58.956 45.455 0.00 0.00 39.34 2.57
2176 3316 3.071312 AGCTCAGATGCTCCCTAAATCAG 59.929 47.826 0.00 0.00 39.34 2.90
2177 3317 3.070734 GCTCAGATGCTCCCTAAATCAGA 59.929 47.826 0.00 0.00 0.00 3.27
2178 3318 4.630111 CTCAGATGCTCCCTAAATCAGAC 58.370 47.826 0.00 0.00 0.00 3.51
2179 3319 3.389329 TCAGATGCTCCCTAAATCAGACC 59.611 47.826 0.00 0.00 0.00 3.85
2180 3320 2.708325 AGATGCTCCCTAAATCAGACCC 59.292 50.000 0.00 0.00 0.00 4.46
2181 3321 0.830648 TGCTCCCTAAATCAGACCCG 59.169 55.000 0.00 0.00 0.00 5.28
2182 3322 0.831307 GCTCCCTAAATCAGACCCGT 59.169 55.000 0.00 0.00 0.00 5.28
2183 3323 1.202545 GCTCCCTAAATCAGACCCGTC 60.203 57.143 0.00 0.00 0.00 4.79
2184 3324 1.413077 CTCCCTAAATCAGACCCGTCC 59.587 57.143 0.00 0.00 0.00 4.79
2185 3325 1.007963 TCCCTAAATCAGACCCGTCCT 59.992 52.381 0.00 0.00 0.00 3.85
2186 3326 1.413077 CCCTAAATCAGACCCGTCCTC 59.587 57.143 0.00 0.00 0.00 3.71
2187 3327 2.389715 CCTAAATCAGACCCGTCCTCT 58.610 52.381 0.00 0.00 0.00 3.69
2188 3328 3.563223 CCTAAATCAGACCCGTCCTCTA 58.437 50.000 0.00 0.00 0.00 2.43
2189 3329 3.570550 CCTAAATCAGACCCGTCCTCTAG 59.429 52.174 0.00 0.00 0.00 2.43
2190 3330 1.404843 AATCAGACCCGTCCTCTAGC 58.595 55.000 0.00 0.00 0.00 3.42
2191 3331 0.259065 ATCAGACCCGTCCTCTAGCA 59.741 55.000 0.00 0.00 0.00 3.49
2192 3332 0.259065 TCAGACCCGTCCTCTAGCAT 59.741 55.000 0.00 0.00 0.00 3.79
2193 3333 0.387202 CAGACCCGTCCTCTAGCATG 59.613 60.000 0.00 0.00 0.00 4.06
2194 3334 0.033011 AGACCCGTCCTCTAGCATGT 60.033 55.000 0.00 0.00 0.00 3.21
2195 3335 0.103208 GACCCGTCCTCTAGCATGTG 59.897 60.000 0.00 0.00 0.00 3.21
2196 3336 1.330655 ACCCGTCCTCTAGCATGTGG 61.331 60.000 0.00 0.00 0.00 4.17
2197 3337 1.043116 CCCGTCCTCTAGCATGTGGA 61.043 60.000 0.00 0.00 0.00 4.02
2198 3338 1.043816 CCGTCCTCTAGCATGTGGAT 58.956 55.000 0.00 0.00 33.05 3.41
2199 3339 1.000283 CCGTCCTCTAGCATGTGGATC 60.000 57.143 0.00 0.00 33.05 3.36
2200 3340 1.959985 CGTCCTCTAGCATGTGGATCT 59.040 52.381 0.00 0.00 33.05 2.75
2201 3341 2.288091 CGTCCTCTAGCATGTGGATCTG 60.288 54.545 0.00 0.00 33.05 2.90
2202 3342 2.697751 GTCCTCTAGCATGTGGATCTGT 59.302 50.000 0.00 0.00 33.05 3.41
2203 3343 3.133721 GTCCTCTAGCATGTGGATCTGTT 59.866 47.826 0.00 0.00 33.05 3.16
2204 3344 3.386078 TCCTCTAGCATGTGGATCTGTTC 59.614 47.826 0.00 0.00 0.00 3.18
2205 3345 3.494048 CCTCTAGCATGTGGATCTGTTCC 60.494 52.174 0.00 0.00 45.69 3.62
2206 3346 2.435805 TCTAGCATGTGGATCTGTTCCC 59.564 50.000 2.43 0.00 44.77 3.97
2207 3347 1.293062 AGCATGTGGATCTGTTCCCT 58.707 50.000 2.43 0.00 44.77 4.20
2208 3348 1.637553 AGCATGTGGATCTGTTCCCTT 59.362 47.619 2.43 0.00 44.77 3.95
2209 3349 2.019984 GCATGTGGATCTGTTCCCTTC 58.980 52.381 2.43 0.00 44.77 3.46
2210 3350 2.648059 CATGTGGATCTGTTCCCTTCC 58.352 52.381 2.43 0.00 44.77 3.46
2211 3351 2.044793 TGTGGATCTGTTCCCTTCCT 57.955 50.000 2.43 0.00 44.77 3.36
2212 3352 2.348472 TGTGGATCTGTTCCCTTCCTT 58.652 47.619 2.43 0.00 44.77 3.36
2213 3353 2.040278 TGTGGATCTGTTCCCTTCCTTG 59.960 50.000 2.43 0.00 44.77 3.61
2214 3354 2.040412 GTGGATCTGTTCCCTTCCTTGT 59.960 50.000 2.43 0.00 44.77 3.16
2215 3355 3.263425 GTGGATCTGTTCCCTTCCTTGTA 59.737 47.826 2.43 0.00 44.77 2.41
2216 3356 4.080299 GTGGATCTGTTCCCTTCCTTGTAT 60.080 45.833 2.43 0.00 44.77 2.29
2217 3357 4.540099 TGGATCTGTTCCCTTCCTTGTATT 59.460 41.667 2.43 0.00 44.77 1.89
2218 3358 5.015178 TGGATCTGTTCCCTTCCTTGTATTT 59.985 40.000 2.43 0.00 44.77 1.40
2219 3359 5.952347 GGATCTGTTCCCTTCCTTGTATTTT 59.048 40.000 0.00 0.00 38.75 1.82
2220 3360 6.437477 GGATCTGTTCCCTTCCTTGTATTTTT 59.563 38.462 0.00 0.00 38.75 1.94
2258 3398 9.249457 CACATGTATCAATATAGTATAAGGCCG 57.751 37.037 0.00 0.00 0.00 6.13
2259 3399 8.421784 ACATGTATCAATATAGTATAAGGCCGG 58.578 37.037 0.00 0.00 0.00 6.13
2260 3400 6.812998 TGTATCAATATAGTATAAGGCCGGC 58.187 40.000 21.18 21.18 0.00 6.13
2261 3401 4.748277 TCAATATAGTATAAGGCCGGCC 57.252 45.455 39.29 39.29 0.00 6.13
2262 3402 4.098155 TCAATATAGTATAAGGCCGGCCA 58.902 43.478 45.13 28.44 38.92 5.36
2263 3403 4.161565 TCAATATAGTATAAGGCCGGCCAG 59.838 45.833 45.13 17.82 38.92 4.85
2264 3404 1.276622 ATAGTATAAGGCCGGCCAGG 58.723 55.000 45.13 6.38 44.97 4.45
2265 3405 0.105349 TAGTATAAGGCCGGCCAGGT 60.105 55.000 45.13 31.25 43.70 4.00
2266 3406 1.227853 GTATAAGGCCGGCCAGGTG 60.228 63.158 45.13 0.00 43.70 4.00
2267 3407 3.114825 TATAAGGCCGGCCAGGTGC 62.115 63.158 45.13 19.46 43.70 5.01
2273 3413 2.440796 CCGGCCAGGTGCATTGAT 60.441 61.111 2.24 0.00 43.89 2.57
2274 3414 2.053865 CCGGCCAGGTGCATTGATT 61.054 57.895 2.24 0.00 43.89 2.57
2275 3415 0.751277 CCGGCCAGGTGCATTGATTA 60.751 55.000 2.24 0.00 43.89 1.75
2276 3416 0.381801 CGGCCAGGTGCATTGATTAC 59.618 55.000 2.24 0.00 43.89 1.89
2277 3417 0.381801 GGCCAGGTGCATTGATTACG 59.618 55.000 0.00 0.00 43.89 3.18
2278 3418 1.378531 GCCAGGTGCATTGATTACGA 58.621 50.000 0.00 0.00 40.77 3.43
2279 3419 1.949525 GCCAGGTGCATTGATTACGAT 59.050 47.619 0.00 0.00 40.77 3.73
2280 3420 2.031682 GCCAGGTGCATTGATTACGATC 60.032 50.000 0.00 0.00 40.77 3.69
2281 3421 3.205338 CCAGGTGCATTGATTACGATCA 58.795 45.455 0.00 0.00 40.46 2.92
2282 3422 3.249320 CCAGGTGCATTGATTACGATCAG 59.751 47.826 0.00 0.00 42.90 2.90
2283 3423 2.874701 AGGTGCATTGATTACGATCAGC 59.125 45.455 0.00 0.00 42.90 4.26
2284 3424 2.613595 GGTGCATTGATTACGATCAGCA 59.386 45.455 0.00 0.00 42.90 4.41
2285 3425 3.065233 GGTGCATTGATTACGATCAGCAA 59.935 43.478 0.00 0.00 41.93 3.91
2286 3426 4.031028 GTGCATTGATTACGATCAGCAAC 58.969 43.478 0.00 0.00 41.93 4.17
2287 3427 3.940852 TGCATTGATTACGATCAGCAACT 59.059 39.130 0.00 0.00 42.90 3.16
2288 3428 4.395854 TGCATTGATTACGATCAGCAACTT 59.604 37.500 0.00 0.00 42.90 2.66
2289 3429 4.966366 GCATTGATTACGATCAGCAACTTC 59.034 41.667 0.00 0.00 42.90 3.01
2290 3430 5.220739 GCATTGATTACGATCAGCAACTTCT 60.221 40.000 0.00 0.00 42.90 2.85
2291 3431 6.417327 CATTGATTACGATCAGCAACTTCTC 58.583 40.000 0.00 0.00 42.90 2.87
2292 3432 5.330455 TGATTACGATCAGCAACTTCTCT 57.670 39.130 0.00 0.00 37.37 3.10
2293 3433 5.105063 TGATTACGATCAGCAACTTCTCTG 58.895 41.667 0.00 0.00 37.37 3.35
2294 3434 1.719600 ACGATCAGCAACTTCTCTGC 58.280 50.000 0.00 0.00 40.24 4.26
2295 3435 0.644331 CGATCAGCAACTTCTCTGCG 59.356 55.000 0.00 0.00 44.75 5.18
2296 3436 0.373024 GATCAGCAACTTCTCTGCGC 59.627 55.000 0.00 0.00 44.75 6.09
2297 3437 0.321034 ATCAGCAACTTCTCTGCGCA 60.321 50.000 10.98 10.98 44.75 6.09
2298 3438 1.206072 CAGCAACTTCTCTGCGCAC 59.794 57.895 5.66 0.00 44.75 5.34
2299 3439 2.171940 GCAACTTCTCTGCGCACG 59.828 61.111 5.66 2.75 0.00 5.34
2300 3440 2.856032 CAACTTCTCTGCGCACGG 59.144 61.111 5.66 1.53 0.00 4.94
2301 3441 3.044305 AACTTCTCTGCGCACGGC 61.044 61.111 5.66 0.00 43.96 5.68
2302 3442 3.521529 AACTTCTCTGCGCACGGCT 62.522 57.895 5.66 0.00 44.05 5.52
2303 3443 3.184683 CTTCTCTGCGCACGGCTC 61.185 66.667 5.66 0.00 44.05 4.70
2304 3444 3.921767 CTTCTCTGCGCACGGCTCA 62.922 63.158 5.66 0.00 44.05 4.26
2305 3445 3.513768 TTCTCTGCGCACGGCTCAA 62.514 57.895 5.66 0.00 44.05 3.02
2306 3446 3.782244 CTCTGCGCACGGCTCAAC 61.782 66.667 5.66 0.00 44.05 3.18
2307 3447 4.600576 TCTGCGCACGGCTCAACA 62.601 61.111 5.66 0.00 44.05 3.33
2308 3448 3.425713 CTGCGCACGGCTCAACAT 61.426 61.111 5.66 0.00 44.05 2.71
2309 3449 2.969806 CTGCGCACGGCTCAACATT 61.970 57.895 5.66 0.00 44.05 2.71
2310 3450 2.255252 GCGCACGGCTCAACATTT 59.745 55.556 0.30 0.00 39.11 2.32
2311 3451 1.371635 GCGCACGGCTCAACATTTT 60.372 52.632 0.30 0.00 39.11 1.82
2312 3452 0.939106 GCGCACGGCTCAACATTTTT 60.939 50.000 0.30 0.00 39.11 1.94
2313 3453 1.052287 CGCACGGCTCAACATTTTTC 58.948 50.000 0.00 0.00 0.00 2.29
2314 3454 1.418373 GCACGGCTCAACATTTTTCC 58.582 50.000 0.00 0.00 0.00 3.13
2315 3455 1.000274 GCACGGCTCAACATTTTTCCT 60.000 47.619 0.00 0.00 0.00 3.36
2316 3456 2.664916 CACGGCTCAACATTTTTCCTG 58.335 47.619 0.00 0.00 0.00 3.86
2317 3457 2.034558 CACGGCTCAACATTTTTCCTGT 59.965 45.455 0.00 0.00 0.00 4.00
2318 3458 2.034558 ACGGCTCAACATTTTTCCTGTG 59.965 45.455 0.00 0.00 0.00 3.66
2319 3459 2.407090 GGCTCAACATTTTTCCTGTGC 58.593 47.619 0.00 0.00 0.00 4.57
2320 3460 2.407090 GCTCAACATTTTTCCTGTGCC 58.593 47.619 0.00 0.00 0.00 5.01
2321 3461 2.664916 CTCAACATTTTTCCTGTGCCG 58.335 47.619 0.00 0.00 0.00 5.69
2322 3462 2.293122 CTCAACATTTTTCCTGTGCCGA 59.707 45.455 0.00 0.00 0.00 5.54
2323 3463 2.293122 TCAACATTTTTCCTGTGCCGAG 59.707 45.455 0.00 0.00 0.00 4.63
2324 3464 0.598065 ACATTTTTCCTGTGCCGAGC 59.402 50.000 0.00 0.00 0.00 5.03
2325 3465 0.883833 CATTTTTCCTGTGCCGAGCT 59.116 50.000 0.00 0.00 0.00 4.09
2326 3466 0.883833 ATTTTTCCTGTGCCGAGCTG 59.116 50.000 0.00 0.00 0.00 4.24
2327 3467 0.179032 TTTTTCCTGTGCCGAGCTGA 60.179 50.000 0.00 0.00 0.00 4.26
2328 3468 0.036732 TTTTCCTGTGCCGAGCTGAT 59.963 50.000 0.00 0.00 0.00 2.90
2329 3469 0.391661 TTTCCTGTGCCGAGCTGATC 60.392 55.000 0.00 0.00 0.00 2.92
2330 3470 2.202987 CCTGTGCCGAGCTGATCC 60.203 66.667 0.00 0.00 0.00 3.36
2331 3471 2.580815 CTGTGCCGAGCTGATCCA 59.419 61.111 0.00 0.00 0.00 3.41
2332 3472 1.145598 CTGTGCCGAGCTGATCCAT 59.854 57.895 0.00 0.00 0.00 3.41
2333 3473 0.879400 CTGTGCCGAGCTGATCCATC 60.879 60.000 0.00 0.00 0.00 3.51
2334 3474 1.332889 TGTGCCGAGCTGATCCATCT 61.333 55.000 0.00 0.00 0.00 2.90
2335 3475 0.599728 GTGCCGAGCTGATCCATCTC 60.600 60.000 0.00 0.00 0.00 2.75
2336 3476 1.005156 GCCGAGCTGATCCATCTCC 60.005 63.158 0.00 0.00 0.00 3.71
2337 3477 1.470996 GCCGAGCTGATCCATCTCCT 61.471 60.000 0.00 0.00 0.00 3.69
2345 3485 1.008815 TGATCCATCTCCTCACAGGGT 59.991 52.381 0.00 0.00 35.59 4.34
2368 3508 1.682087 GCTCTATGTTTTTCGGGGCCT 60.682 52.381 0.84 0.00 0.00 5.19
2424 3564 9.552114 GGTAATATATATGTACGCATATCCGAC 57.448 37.037 0.00 0.00 44.59 4.79
2446 3586 9.489084 CCGACCATATTTTATTATTCTGAGACA 57.511 33.333 0.00 0.00 0.00 3.41
2484 3625 9.927668 AAAATTGATAATCGACCTCAAACAATT 57.072 25.926 9.40 0.00 37.14 2.32
2485 3626 9.573133 AAATTGATAATCGACCTCAAACAATTC 57.427 29.630 9.40 0.00 35.42 2.17
2487 3628 7.921786 TGATAATCGACCTCAAACAATTCTT 57.078 32.000 0.00 0.00 0.00 2.52
2488 3629 7.974675 TGATAATCGACCTCAAACAATTCTTC 58.025 34.615 0.00 0.00 0.00 2.87
2489 3630 7.606073 TGATAATCGACCTCAAACAATTCTTCA 59.394 33.333 0.00 0.00 0.00 3.02
2490 3631 5.869753 ATCGACCTCAAACAATTCTTCAG 57.130 39.130 0.00 0.00 0.00 3.02
2492 3633 5.849510 TCGACCTCAAACAATTCTTCAGTA 58.150 37.500 0.00 0.00 0.00 2.74
2493 3634 5.926542 TCGACCTCAAACAATTCTTCAGTAG 59.073 40.000 0.00 0.00 0.00 2.57
2494 3635 5.696724 CGACCTCAAACAATTCTTCAGTAGT 59.303 40.000 0.00 0.00 0.00 2.73
2495 3636 6.202954 CGACCTCAAACAATTCTTCAGTAGTT 59.797 38.462 0.00 0.00 0.00 2.24
2496 3637 7.254795 CGACCTCAAACAATTCTTCAGTAGTTT 60.255 37.037 0.00 0.00 0.00 2.66
2497 3638 7.931275 ACCTCAAACAATTCTTCAGTAGTTTC 58.069 34.615 0.00 0.00 0.00 2.78
2522 3663 8.584157 TCAATTTAGATCCTAAAGCTGCAAAAA 58.416 29.630 1.02 0.00 0.00 1.94
2594 6479 4.519540 ACATTTACGCCAAGAAAGCAAT 57.480 36.364 0.00 0.00 0.00 3.56
2608 6493 7.596995 CCAAGAAAGCAATAAAATCAACCGTAA 59.403 33.333 0.00 0.00 0.00 3.18
2641 6526 2.027561 AGACGGGAATCACGGAATCAAA 60.028 45.455 10.50 0.00 35.23 2.69
2651 6536 7.148069 GGAATCACGGAATCAAAGATTAAAGGT 60.148 37.037 0.00 0.00 0.00 3.50
2824 6718 1.414158 ATGTAGTATGCCAGGCGTCT 58.586 50.000 10.31 9.91 0.00 4.18
2981 6880 4.154347 CAGAGCCGGCCCTGTCTC 62.154 72.222 28.38 16.08 0.00 3.36
2986 6885 3.775654 CCGGCCCTGTCTCCTCAC 61.776 72.222 0.00 0.00 0.00 3.51
2987 6886 2.997315 CGGCCCTGTCTCCTCACA 60.997 66.667 0.00 0.00 0.00 3.58
2988 6887 2.665603 GGCCCTGTCTCCTCACAC 59.334 66.667 0.00 0.00 0.00 3.82
2989 6888 2.262915 GCCCTGTCTCCTCACACG 59.737 66.667 0.00 0.00 0.00 4.49
2990 6889 2.973899 CCCTGTCTCCTCACACGG 59.026 66.667 0.00 0.00 0.00 4.94
2991 6890 1.606601 CCCTGTCTCCTCACACGGA 60.607 63.158 0.00 0.00 0.00 4.69
2992 6891 1.587054 CCTGTCTCCTCACACGGAC 59.413 63.158 0.00 0.00 0.00 4.79
2993 6892 0.896019 CCTGTCTCCTCACACGGACT 60.896 60.000 0.00 0.00 0.00 3.85
2994 6893 0.523966 CTGTCTCCTCACACGGACTC 59.476 60.000 0.00 0.00 0.00 3.36
2995 6894 0.179001 TGTCTCCTCACACGGACTCA 60.179 55.000 0.00 0.00 0.00 3.41
2996 6895 1.178276 GTCTCCTCACACGGACTCAT 58.822 55.000 0.00 0.00 0.00 2.90
2997 6896 1.546476 GTCTCCTCACACGGACTCATT 59.454 52.381 0.00 0.00 0.00 2.57
2998 6897 2.753452 GTCTCCTCACACGGACTCATTA 59.247 50.000 0.00 0.00 0.00 1.90
2999 6898 3.192844 GTCTCCTCACACGGACTCATTAA 59.807 47.826 0.00 0.00 0.00 1.40
3000 6899 3.192844 TCTCCTCACACGGACTCATTAAC 59.807 47.826 0.00 0.00 0.00 2.01
3001 6900 3.162666 TCCTCACACGGACTCATTAACT 58.837 45.455 0.00 0.00 0.00 2.24
3002 6901 3.192844 TCCTCACACGGACTCATTAACTC 59.807 47.826 0.00 0.00 0.00 3.01
3003 6902 3.512680 CTCACACGGACTCATTAACTCC 58.487 50.000 0.00 0.00 0.00 3.85
3004 6903 2.232941 TCACACGGACTCATTAACTCCC 59.767 50.000 0.00 0.00 0.00 4.30
3005 6904 1.553704 ACACGGACTCATTAACTCCCC 59.446 52.381 0.00 0.00 0.00 4.81
3006 6905 1.134491 CACGGACTCATTAACTCCCCC 60.134 57.143 0.00 0.00 0.00 5.40
3007 6906 1.200519 CGGACTCATTAACTCCCCCA 58.799 55.000 0.00 0.00 0.00 4.96
3008 6907 1.134491 CGGACTCATTAACTCCCCCAC 60.134 57.143 0.00 0.00 0.00 4.61
3009 6908 1.212195 GGACTCATTAACTCCCCCACC 59.788 57.143 0.00 0.00 0.00 4.61
3010 6909 1.212195 GACTCATTAACTCCCCCACCC 59.788 57.143 0.00 0.00 0.00 4.61
3011 6910 0.551396 CTCATTAACTCCCCCACCCC 59.449 60.000 0.00 0.00 0.00 4.95
3012 6911 0.178828 TCATTAACTCCCCCACCCCA 60.179 55.000 0.00 0.00 0.00 4.96
3013 6912 0.033503 CATTAACTCCCCCACCCCAC 60.034 60.000 0.00 0.00 0.00 4.61
3014 6913 1.219131 ATTAACTCCCCCACCCCACC 61.219 60.000 0.00 0.00 0.00 4.61
3015 6914 3.895253 TAACTCCCCCACCCCACCC 62.895 68.421 0.00 0.00 0.00 4.61
3030 6929 3.006728 CCCCGACCCAGTGCCTTA 61.007 66.667 0.00 0.00 0.00 2.69
3031 6930 2.375345 CCCCGACCCAGTGCCTTAT 61.375 63.158 0.00 0.00 0.00 1.73
3032 6931 1.052124 CCCCGACCCAGTGCCTTATA 61.052 60.000 0.00 0.00 0.00 0.98
3033 6932 0.834612 CCCGACCCAGTGCCTTATAA 59.165 55.000 0.00 0.00 0.00 0.98
3034 6933 1.420138 CCCGACCCAGTGCCTTATAAT 59.580 52.381 0.00 0.00 0.00 1.28
3035 6934 2.635915 CCCGACCCAGTGCCTTATAATA 59.364 50.000 0.00 0.00 0.00 0.98
3036 6935 3.263425 CCCGACCCAGTGCCTTATAATAT 59.737 47.826 0.00 0.00 0.00 1.28
3037 6936 4.263331 CCCGACCCAGTGCCTTATAATATT 60.263 45.833 0.00 0.00 0.00 1.28
3038 6937 5.313712 CCGACCCAGTGCCTTATAATATTT 58.686 41.667 0.00 0.00 0.00 1.40
3039 6938 6.469410 CCGACCCAGTGCCTTATAATATTTA 58.531 40.000 0.00 0.00 0.00 1.40
3040 6939 7.110155 CCGACCCAGTGCCTTATAATATTTAT 58.890 38.462 0.00 0.00 0.00 1.40
3041 6940 8.262227 CCGACCCAGTGCCTTATAATATTTATA 58.738 37.037 0.00 0.00 0.00 0.98
3042 6941 9.832445 CGACCCAGTGCCTTATAATATTTATAT 57.168 33.333 0.00 0.00 0.00 0.86
3058 6957 9.425248 AATATTTATATATCCCCACCATGCAAG 57.575 33.333 0.00 0.00 0.00 4.01
3059 6958 5.858876 TTATATATCCCCACCATGCAAGT 57.141 39.130 0.00 0.00 0.00 3.16
3060 6959 6.961361 TTATATATCCCCACCATGCAAGTA 57.039 37.500 0.00 0.00 0.00 2.24
3061 6960 3.795688 ATATCCCCACCATGCAAGTAG 57.204 47.619 0.00 0.00 0.00 2.57
3062 6961 1.298953 ATCCCCACCATGCAAGTAGT 58.701 50.000 0.00 0.00 0.00 2.73
3063 6962 1.959710 TCCCCACCATGCAAGTAGTA 58.040 50.000 0.00 0.00 0.00 1.82
3064 6963 1.837439 TCCCCACCATGCAAGTAGTAG 59.163 52.381 0.00 0.00 0.00 2.57
3065 6964 1.559682 CCCCACCATGCAAGTAGTAGT 59.440 52.381 0.00 0.00 0.00 2.73
3066 6965 2.769663 CCCCACCATGCAAGTAGTAGTA 59.230 50.000 0.00 0.00 0.00 1.82
3067 6966 3.199071 CCCCACCATGCAAGTAGTAGTAA 59.801 47.826 0.00 0.00 0.00 2.24
3068 6967 4.189231 CCCACCATGCAAGTAGTAGTAAC 58.811 47.826 0.00 0.00 0.00 2.50
3069 6968 3.863424 CCACCATGCAAGTAGTAGTAACG 59.137 47.826 0.00 0.00 0.00 3.18
3070 6969 4.381185 CCACCATGCAAGTAGTAGTAACGA 60.381 45.833 0.00 0.00 0.00 3.85
3071 6970 5.165676 CACCATGCAAGTAGTAGTAACGAA 58.834 41.667 0.00 0.00 0.00 3.85
3072 6971 5.288712 CACCATGCAAGTAGTAGTAACGAAG 59.711 44.000 0.00 0.00 0.00 3.79
3073 6972 5.184479 ACCATGCAAGTAGTAGTAACGAAGA 59.816 40.000 0.00 0.00 0.00 2.87
3074 6973 5.515626 CCATGCAAGTAGTAGTAACGAAGAC 59.484 44.000 0.00 0.00 0.00 3.01
3075 6974 4.715896 TGCAAGTAGTAGTAACGAAGACG 58.284 43.478 0.00 0.00 45.75 4.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
12 13 8.445493 CAATGAAAAATTTGGCTAGATGGAAAC 58.555 33.333 0.00 0.00 0.00 2.78
122 124 6.866480 AGTTGTCAAAAACACATGAATCTGT 58.134 32.000 0.00 0.00 37.70 3.41
192 198 3.193691 CGGTTCACAGGATTCTACAGACT 59.806 47.826 0.00 0.00 0.00 3.24
195 201 3.868757 TCGGTTCACAGGATTCTACAG 57.131 47.619 0.00 0.00 0.00 2.74
197 203 4.158025 TCTCTTCGGTTCACAGGATTCTAC 59.842 45.833 0.00 0.00 0.00 2.59
214 220 4.389374 TGACAATCAACTTGGGTCTCTTC 58.611 43.478 0.00 0.00 39.30 2.87
237 244 8.233190 CAGTTTAAGAAGGAGAACACATGAATC 58.767 37.037 0.00 0.00 0.00 2.52
249 256 5.165961 TGATCCCACAGTTTAAGAAGGAG 57.834 43.478 0.00 0.00 0.00 3.69
278 285 1.529152 AAAATGGGACGGCGGGAAAC 61.529 55.000 13.24 0.00 0.00 2.78
285 292 1.531739 TTGGAGCAAAATGGGACGGC 61.532 55.000 0.00 0.00 0.00 5.68
290 297 3.261390 TCAAAGGATTGGAGCAAAATGGG 59.739 43.478 0.00 0.00 37.15 4.00
293 300 6.827762 TGTTTTTCAAAGGATTGGAGCAAAAT 59.172 30.769 0.00 0.00 37.15 1.82
319 326 6.961359 TTTCTTATAACGACACCACTCATG 57.039 37.500 0.00 0.00 0.00 3.07
364 375 3.118775 GGAAAATGTATTTCAGGGGTGGC 60.119 47.826 3.63 0.00 0.00 5.01
484 803 3.618351 CATGATTCCTGGCAGACTTTCT 58.382 45.455 17.94 0.00 0.00 2.52
503 824 3.039011 AGTACTTATCTTGACCGGGCAT 58.961 45.455 13.08 0.00 0.00 4.40
557 880 1.479730 AGTTGCATCTCGAGATCTGCA 59.520 47.619 30.45 30.45 38.02 4.41
617 1337 1.432514 AGTAGTTGACATGCGTGCAG 58.567 50.000 5.64 0.00 0.00 4.41
709 1711 0.837272 TTACTCCCACTATGGCCAGC 59.163 55.000 13.05 0.00 35.79 4.85
710 1712 1.837439 TGTTACTCCCACTATGGCCAG 59.163 52.381 13.05 0.00 35.79 4.85
711 1713 1.959710 TGTTACTCCCACTATGGCCA 58.040 50.000 8.56 8.56 35.79 5.36
712 1714 4.699925 TTATGTTACTCCCACTATGGCC 57.300 45.455 0.00 0.00 35.79 5.36
713 1715 7.450903 ACTAATTATGTTACTCCCACTATGGC 58.549 38.462 0.00 0.00 35.79 4.40
719 1721 8.936864 GCATGATACTAATTATGTTACTCCCAC 58.063 37.037 0.00 0.00 32.91 4.61
720 1722 8.655901 TGCATGATACTAATTATGTTACTCCCA 58.344 33.333 0.00 0.00 32.91 4.37
721 1723 8.936864 GTGCATGATACTAATTATGTTACTCCC 58.063 37.037 0.00 0.00 32.91 4.30
722 1724 9.712305 AGTGCATGATACTAATTATGTTACTCC 57.288 33.333 0.00 0.00 32.91 3.85
727 1729 9.836864 TCTCAAGTGCATGATACTAATTATGTT 57.163 29.630 0.00 0.00 32.91 2.71
728 1730 9.265901 GTCTCAAGTGCATGATACTAATTATGT 57.734 33.333 0.00 0.00 32.91 2.29
729 1731 9.486497 AGTCTCAAGTGCATGATACTAATTATG 57.514 33.333 6.57 0.00 35.66 1.90
730 1732 9.703892 GAGTCTCAAGTGCATGATACTAATTAT 57.296 33.333 7.98 0.00 37.02 1.28
731 1733 7.862873 CGAGTCTCAAGTGCATGATACTAATTA 59.137 37.037 7.98 0.00 37.02 1.40
732 1734 6.699204 CGAGTCTCAAGTGCATGATACTAATT 59.301 38.462 7.98 0.00 37.02 1.40
733 1735 6.212235 CGAGTCTCAAGTGCATGATACTAAT 58.788 40.000 7.98 0.00 37.02 1.73
734 1736 5.582550 CGAGTCTCAAGTGCATGATACTAA 58.417 41.667 7.98 0.00 37.02 2.24
735 1737 4.498177 GCGAGTCTCAAGTGCATGATACTA 60.498 45.833 7.98 0.00 37.02 1.82
736 1738 3.736433 GCGAGTCTCAAGTGCATGATACT 60.736 47.826 7.78 7.78 38.87 2.12
737 1739 2.537625 GCGAGTCTCAAGTGCATGATAC 59.462 50.000 0.00 0.00 0.00 2.24
738 1740 2.166254 TGCGAGTCTCAAGTGCATGATA 59.834 45.455 0.00 0.00 0.00 2.15
739 1741 1.066645 TGCGAGTCTCAAGTGCATGAT 60.067 47.619 0.00 0.00 0.00 2.45
740 1742 0.318120 TGCGAGTCTCAAGTGCATGA 59.682 50.000 0.00 0.00 0.00 3.07
741 1743 1.150827 TTGCGAGTCTCAAGTGCATG 58.849 50.000 0.00 0.00 35.20 4.06
742 1744 1.532868 GTTTGCGAGTCTCAAGTGCAT 59.467 47.619 0.00 0.00 35.20 3.96
743 1745 0.937304 GTTTGCGAGTCTCAAGTGCA 59.063 50.000 0.00 0.00 0.00 4.57
744 1746 0.937304 TGTTTGCGAGTCTCAAGTGC 59.063 50.000 0.00 0.00 0.00 4.40
745 1747 3.990469 AGTATGTTTGCGAGTCTCAAGTG 59.010 43.478 0.00 0.00 0.00 3.16
746 1748 4.258702 AGTATGTTTGCGAGTCTCAAGT 57.741 40.909 0.00 0.00 0.00 3.16
747 1749 6.311445 ACATAAGTATGTTTGCGAGTCTCAAG 59.689 38.462 0.00 0.00 43.99 3.02
748 1750 6.090763 CACATAAGTATGTTTGCGAGTCTCAA 59.909 38.462 1.09 0.00 43.99 3.02
749 1751 5.576774 CACATAAGTATGTTTGCGAGTCTCA 59.423 40.000 1.09 0.00 43.99 3.27
750 1752 5.005779 CCACATAAGTATGTTTGCGAGTCTC 59.994 44.000 1.09 0.00 43.99 3.36
751 1753 4.870426 CCACATAAGTATGTTTGCGAGTCT 59.130 41.667 1.09 0.00 43.99 3.24
752 1754 4.494199 GCCACATAAGTATGTTTGCGAGTC 60.494 45.833 1.09 0.00 43.99 3.36
753 1755 3.374058 GCCACATAAGTATGTTTGCGAGT 59.626 43.478 1.09 0.00 43.99 4.18
754 1756 3.373748 TGCCACATAAGTATGTTTGCGAG 59.626 43.478 13.78 0.26 43.99 5.03
755 1757 3.339141 TGCCACATAAGTATGTTTGCGA 58.661 40.909 13.78 5.33 43.99 5.10
756 1758 3.373748 TCTGCCACATAAGTATGTTTGCG 59.626 43.478 13.78 10.42 43.99 4.85
757 1759 4.155826 TGTCTGCCACATAAGTATGTTTGC 59.844 41.667 12.59 12.59 43.99 3.68
758 1760 5.878332 TGTCTGCCACATAAGTATGTTTG 57.122 39.130 1.09 0.00 43.99 2.93
759 1761 7.466746 AATTGTCTGCCACATAAGTATGTTT 57.533 32.000 1.09 0.00 43.99 2.83
760 1762 8.574251 TTAATTGTCTGCCACATAAGTATGTT 57.426 30.769 1.09 0.00 43.99 2.71
762 1764 8.892723 TCTTTAATTGTCTGCCACATAAGTATG 58.107 33.333 0.00 0.00 39.55 2.39
763 1765 9.461312 TTCTTTAATTGTCTGCCACATAAGTAT 57.539 29.630 0.00 0.00 33.90 2.12
764 1766 8.856153 TTCTTTAATTGTCTGCCACATAAGTA 57.144 30.769 0.00 0.00 33.90 2.24
765 1767 7.665559 TCTTCTTTAATTGTCTGCCACATAAGT 59.334 33.333 0.00 0.00 33.90 2.24
766 1768 8.044060 TCTTCTTTAATTGTCTGCCACATAAG 57.956 34.615 0.00 0.00 33.90 1.73
767 1769 7.994425 TCTTCTTTAATTGTCTGCCACATAA 57.006 32.000 0.00 0.00 33.90 1.90
768 1770 7.994425 TTCTTCTTTAATTGTCTGCCACATA 57.006 32.000 0.00 0.00 33.90 2.29
769 1771 6.899393 TTCTTCTTTAATTGTCTGCCACAT 57.101 33.333 0.00 0.00 33.90 3.21
770 1772 6.545666 TCTTTCTTCTTTAATTGTCTGCCACA 59.454 34.615 0.00 0.00 0.00 4.17
771 1773 6.970484 TCTTTCTTCTTTAATTGTCTGCCAC 58.030 36.000 0.00 0.00 0.00 5.01
772 1774 6.998074 TCTCTTTCTTCTTTAATTGTCTGCCA 59.002 34.615 0.00 0.00 0.00 4.92
773 1775 7.440523 TCTCTTTCTTCTTTAATTGTCTGCC 57.559 36.000 0.00 0.00 0.00 4.85
774 1776 7.967303 CCATCTCTTTCTTCTTTAATTGTCTGC 59.033 37.037 0.00 0.00 0.00 4.26
775 1777 7.967303 GCCATCTCTTTCTTCTTTAATTGTCTG 59.033 37.037 0.00 0.00 0.00 3.51
776 1778 7.667219 TGCCATCTCTTTCTTCTTTAATTGTCT 59.333 33.333 0.00 0.00 0.00 3.41
777 1779 7.820648 TGCCATCTCTTTCTTCTTTAATTGTC 58.179 34.615 0.00 0.00 0.00 3.18
778 1780 7.765695 TGCCATCTCTTTCTTCTTTAATTGT 57.234 32.000 0.00 0.00 0.00 2.71
781 1783 9.692325 ACTATTGCCATCTCTTTCTTCTTTAAT 57.308 29.630 0.00 0.00 0.00 1.40
784 1786 8.951243 GTTACTATTGCCATCTCTTTCTTCTTT 58.049 33.333 0.00 0.00 0.00 2.52
785 1787 8.103305 TGTTACTATTGCCATCTCTTTCTTCTT 58.897 33.333 0.00 0.00 0.00 2.52
786 1788 7.624549 TGTTACTATTGCCATCTCTTTCTTCT 58.375 34.615 0.00 0.00 0.00 2.85
787 1789 7.849804 TGTTACTATTGCCATCTCTTTCTTC 57.150 36.000 0.00 0.00 0.00 2.87
788 1790 9.553064 CTATGTTACTATTGCCATCTCTTTCTT 57.447 33.333 0.00 0.00 0.00 2.52
789 1791 8.928448 TCTATGTTACTATTGCCATCTCTTTCT 58.072 33.333 0.00 0.00 0.00 2.52
790 1792 9.547753 TTCTATGTTACTATTGCCATCTCTTTC 57.452 33.333 0.00 0.00 0.00 2.62
795 1797 9.935241 CAGTATTCTATGTTACTATTGCCATCT 57.065 33.333 0.00 0.00 0.00 2.90
796 1798 9.712305 ACAGTATTCTATGTTACTATTGCCATC 57.288 33.333 0.00 0.00 0.00 3.51
831 1833 9.771534 TGCATAACACATAGTAGCATAACATTA 57.228 29.630 0.00 0.00 30.77 1.90
832 1834 8.675705 TGCATAACACATAGTAGCATAACATT 57.324 30.769 0.00 0.00 30.77 2.71
833 1835 8.724229 CATGCATAACACATAGTAGCATAACAT 58.276 33.333 0.00 0.00 39.67 2.71
834 1836 7.173047 CCATGCATAACACATAGTAGCATAACA 59.827 37.037 0.00 0.00 39.67 2.41
835 1837 7.173218 ACCATGCATAACACATAGTAGCATAAC 59.827 37.037 0.00 0.00 39.67 1.89
836 1838 7.223584 ACCATGCATAACACATAGTAGCATAA 58.776 34.615 0.00 0.00 39.67 1.90
837 1839 6.768483 ACCATGCATAACACATAGTAGCATA 58.232 36.000 0.00 0.00 39.67 3.14
838 1840 5.624159 ACCATGCATAACACATAGTAGCAT 58.376 37.500 0.00 0.00 41.22 3.79
839 1841 5.034852 ACCATGCATAACACATAGTAGCA 57.965 39.130 0.00 0.00 37.15 3.49
840 1842 7.672983 ATTACCATGCATAACACATAGTAGC 57.327 36.000 0.00 0.00 0.00 3.58
848 1850 9.893305 GGTCTAATTTATTACCATGCATAACAC 57.107 33.333 0.00 0.00 0.00 3.32
849 1851 9.634021 TGGTCTAATTTATTACCATGCATAACA 57.366 29.630 0.00 0.00 0.00 2.41
947 1949 9.938280 GGTCATAGTGGCAAGTAACATATAATA 57.062 33.333 0.00 0.00 0.00 0.98
948 1950 8.436778 TGGTCATAGTGGCAAGTAACATATAAT 58.563 33.333 0.00 0.00 0.00 1.28
949 1951 7.797062 TGGTCATAGTGGCAAGTAACATATAA 58.203 34.615 0.00 0.00 0.00 0.98
950 1952 7.368198 TGGTCATAGTGGCAAGTAACATATA 57.632 36.000 0.00 0.00 0.00 0.86
951 1953 6.247229 TGGTCATAGTGGCAAGTAACATAT 57.753 37.500 0.00 0.00 0.00 1.78
952 1954 5.670485 CTGGTCATAGTGGCAAGTAACATA 58.330 41.667 0.00 0.00 0.00 2.29
953 1955 4.517285 CTGGTCATAGTGGCAAGTAACAT 58.483 43.478 0.00 0.00 0.00 2.71
954 1956 3.868369 GCTGGTCATAGTGGCAAGTAACA 60.868 47.826 0.00 0.00 0.00 2.41
955 1957 2.678336 GCTGGTCATAGTGGCAAGTAAC 59.322 50.000 0.00 0.00 0.00 2.50
956 1958 2.355716 GGCTGGTCATAGTGGCAAGTAA 60.356 50.000 0.00 0.00 0.00 2.24
957 1959 1.209504 GGCTGGTCATAGTGGCAAGTA 59.790 52.381 0.00 0.00 0.00 2.24
958 1960 0.035056 GGCTGGTCATAGTGGCAAGT 60.035 55.000 0.00 0.00 0.00 3.16
959 1961 0.254178 AGGCTGGTCATAGTGGCAAG 59.746 55.000 0.00 0.00 0.00 4.01
960 1962 1.578897 TAGGCTGGTCATAGTGGCAA 58.421 50.000 0.00 0.00 0.00 4.52
961 1963 1.486310 CTTAGGCTGGTCATAGTGGCA 59.514 52.381 0.00 0.00 0.00 4.92
962 1964 1.486726 ACTTAGGCTGGTCATAGTGGC 59.513 52.381 0.00 0.00 0.00 5.01
963 1965 4.588951 TCATACTTAGGCTGGTCATAGTGG 59.411 45.833 0.00 0.00 0.00 4.00
964 1966 5.791336 TCATACTTAGGCTGGTCATAGTG 57.209 43.478 0.00 0.00 0.00 2.74
965 1967 7.291182 AGAAATCATACTTAGGCTGGTCATAGT 59.709 37.037 0.00 0.00 0.00 2.12
966 1968 7.601886 CAGAAATCATACTTAGGCTGGTCATAG 59.398 40.741 0.00 0.00 0.00 2.23
967 1969 7.445121 CAGAAATCATACTTAGGCTGGTCATA 58.555 38.462 0.00 0.00 0.00 2.15
968 1970 6.294473 CAGAAATCATACTTAGGCTGGTCAT 58.706 40.000 0.00 0.00 0.00 3.06
969 1971 5.396772 CCAGAAATCATACTTAGGCTGGTCA 60.397 44.000 0.00 0.00 37.48 4.02
970 1972 5.059833 CCAGAAATCATACTTAGGCTGGTC 58.940 45.833 0.00 0.00 37.48 4.02
971 1973 4.687219 GCCAGAAATCATACTTAGGCTGGT 60.687 45.833 0.00 0.00 42.68 4.00
972 1974 3.817647 GCCAGAAATCATACTTAGGCTGG 59.182 47.826 0.00 0.00 43.37 4.85
973 1975 3.817647 GGCCAGAAATCATACTTAGGCTG 59.182 47.826 0.00 0.00 40.61 4.85
974 1976 3.495100 CGGCCAGAAATCATACTTAGGCT 60.495 47.826 2.24 0.00 40.61 4.58
975 1977 2.808543 CGGCCAGAAATCATACTTAGGC 59.191 50.000 2.24 0.00 40.08 3.93
976 1978 3.809832 CACGGCCAGAAATCATACTTAGG 59.190 47.826 2.24 0.00 0.00 2.69
977 1979 3.248602 GCACGGCCAGAAATCATACTTAG 59.751 47.826 2.24 0.00 0.00 2.18
978 1980 3.202906 GCACGGCCAGAAATCATACTTA 58.797 45.455 2.24 0.00 0.00 2.24
979 1981 2.017049 GCACGGCCAGAAATCATACTT 58.983 47.619 2.24 0.00 0.00 2.24
980 1982 1.668419 GCACGGCCAGAAATCATACT 58.332 50.000 2.24 0.00 0.00 2.12
1088 2090 5.083533 AGCCATTAGAGAAGAAGACACAG 57.916 43.478 0.00 0.00 0.00 3.66
1158 2169 2.352651 CGACAAAGGTATGACCAGCATG 59.647 50.000 0.00 0.00 41.95 4.06
1159 2170 2.632377 CGACAAAGGTATGACCAGCAT 58.368 47.619 0.00 0.00 41.95 3.79
1160 2171 1.338674 CCGACAAAGGTATGACCAGCA 60.339 52.381 0.00 0.00 41.95 4.41
1161 2172 1.369625 CCGACAAAGGTATGACCAGC 58.630 55.000 0.00 0.00 41.95 4.85
1162 2173 2.012051 GCCCGACAAAGGTATGACCAG 61.012 57.143 0.00 0.00 41.95 4.00
1163 2174 0.035820 GCCCGACAAAGGTATGACCA 60.036 55.000 0.00 0.00 41.95 4.02
1252 2263 2.680707 TGGCACCGGTGGTATCGA 60.681 61.111 34.58 13.36 32.11 3.59
1411 2422 2.272447 TGCACATGTCGGTCTCGGA 61.272 57.895 0.00 0.00 36.95 4.55
1740 2759 4.183865 TGTTGGAGATGCTCTTAATGTCG 58.816 43.478 0.00 0.00 0.00 4.35
1741 2760 5.181748 ACTGTTGGAGATGCTCTTAATGTC 58.818 41.667 0.00 0.00 0.00 3.06
1742 2761 5.171339 ACTGTTGGAGATGCTCTTAATGT 57.829 39.130 0.00 0.00 0.00 2.71
1743 2762 4.269603 CGACTGTTGGAGATGCTCTTAATG 59.730 45.833 0.00 0.00 0.00 1.90
1744 2763 4.437239 CGACTGTTGGAGATGCTCTTAAT 58.563 43.478 0.00 0.00 0.00 1.40
1745 2764 3.849911 CGACTGTTGGAGATGCTCTTAA 58.150 45.455 0.00 0.00 0.00 1.85
1757 2777 0.744281 AGTTTTTGGGCGACTGTTGG 59.256 50.000 0.00 0.00 0.00 3.77
1832 2852 3.156879 GCGCGCGCACTGTTTTAC 61.157 61.111 46.11 15.61 41.49 2.01
1851 2871 1.125847 GCGCGCGTCCAACTATTTTG 61.126 55.000 32.35 0.00 0.00 2.44
1856 2876 3.561217 TTCAGCGCGCGTCCAACTA 62.561 57.895 32.35 7.79 0.00 2.24
1909 2929 2.175184 ATTGTGAAGCGCGCACAGTC 62.175 55.000 35.10 23.28 45.85 3.51
1911 2931 0.661187 AAATTGTGAAGCGCGCACAG 60.661 50.000 35.10 0.00 45.85 3.66
1932 2952 2.160022 GCGCCCAAAAGAACACGTAATA 59.840 45.455 0.00 0.00 0.00 0.98
1936 2956 2.719354 GCGCCCAAAAGAACACGT 59.281 55.556 0.00 0.00 0.00 4.49
1937 2957 2.426752 CGCGCCCAAAAGAACACG 60.427 61.111 0.00 0.00 0.00 4.49
1957 2977 3.115554 CGCTTTAGCATATGCCCAAAAC 58.884 45.455 23.96 17.01 43.38 2.43
2024 3044 5.105513 ACAAAAATCCCGTGCCCTAAAATAG 60.106 40.000 0.00 0.00 0.00 1.73
2036 3056 4.142182 CCAATAGATGCACAAAAATCCCGT 60.142 41.667 0.00 0.00 0.00 5.28
2087 3227 4.416513 ACCATCCATCCCATCATGTAAGAA 59.583 41.667 0.00 0.00 0.00 2.52
2133 3273 4.493547 CTCGAGCTCAGAAATGGATATCC 58.506 47.826 15.39 15.39 0.00 2.59
2134 3274 3.925913 GCTCGAGCTCAGAAATGGATATC 59.074 47.826 29.88 0.00 38.21 1.63
2135 3275 3.924144 GCTCGAGCTCAGAAATGGATAT 58.076 45.455 29.88 0.00 38.21 1.63
2136 3276 3.377346 GCTCGAGCTCAGAAATGGATA 57.623 47.619 29.88 0.00 38.21 2.59
2137 3277 2.237393 GCTCGAGCTCAGAAATGGAT 57.763 50.000 29.88 0.00 38.21 3.41
2138 3278 3.748863 GCTCGAGCTCAGAAATGGA 57.251 52.632 29.88 0.00 38.21 3.41
2155 3295 3.070734 TCTGATTTAGGGAGCATCTGAGC 59.929 47.826 0.00 0.00 33.73 4.26
2156 3296 4.502950 GGTCTGATTTAGGGAGCATCTGAG 60.503 50.000 0.00 0.00 33.73 3.35
2157 3297 3.389329 GGTCTGATTTAGGGAGCATCTGA 59.611 47.826 0.00 0.00 33.73 3.27
2158 3298 3.495806 GGGTCTGATTTAGGGAGCATCTG 60.496 52.174 0.00 0.00 33.73 2.90
2159 3299 2.708325 GGGTCTGATTTAGGGAGCATCT 59.292 50.000 0.00 0.00 33.73 2.90
2160 3300 2.548920 CGGGTCTGATTTAGGGAGCATC 60.549 54.545 0.00 0.00 0.00 3.91
2161 3301 1.417890 CGGGTCTGATTTAGGGAGCAT 59.582 52.381 0.00 0.00 0.00 3.79
2162 3302 0.830648 CGGGTCTGATTTAGGGAGCA 59.169 55.000 0.00 0.00 0.00 4.26
2163 3303 0.831307 ACGGGTCTGATTTAGGGAGC 59.169 55.000 0.00 0.00 0.00 4.70
2164 3304 1.413077 GGACGGGTCTGATTTAGGGAG 59.587 57.143 0.00 0.00 0.00 4.30
2165 3305 1.007963 AGGACGGGTCTGATTTAGGGA 59.992 52.381 0.00 0.00 0.00 4.20
2166 3306 1.413077 GAGGACGGGTCTGATTTAGGG 59.587 57.143 0.00 0.00 0.00 3.53
2167 3307 2.389715 AGAGGACGGGTCTGATTTAGG 58.610 52.381 0.00 0.00 0.00 2.69
2168 3308 3.004944 GCTAGAGGACGGGTCTGATTTAG 59.995 52.174 0.00 0.00 0.00 1.85
2169 3309 2.957006 GCTAGAGGACGGGTCTGATTTA 59.043 50.000 0.00 0.00 0.00 1.40
2170 3310 1.757699 GCTAGAGGACGGGTCTGATTT 59.242 52.381 0.00 0.00 0.00 2.17
2171 3311 1.342076 TGCTAGAGGACGGGTCTGATT 60.342 52.381 0.00 0.00 0.00 2.57
2172 3312 0.259065 TGCTAGAGGACGGGTCTGAT 59.741 55.000 0.00 0.00 0.00 2.90
2173 3313 0.259065 ATGCTAGAGGACGGGTCTGA 59.741 55.000 0.00 0.00 0.00 3.27
2174 3314 0.387202 CATGCTAGAGGACGGGTCTG 59.613 60.000 0.00 0.00 0.00 3.51
2175 3315 0.033011 ACATGCTAGAGGACGGGTCT 60.033 55.000 0.00 0.00 0.00 3.85
2176 3316 0.103208 CACATGCTAGAGGACGGGTC 59.897 60.000 0.00 0.00 0.00 4.46
2177 3317 1.330655 CCACATGCTAGAGGACGGGT 61.331 60.000 0.00 0.00 0.00 5.28
2178 3318 1.043116 TCCACATGCTAGAGGACGGG 61.043 60.000 0.00 0.00 0.00 5.28
2179 3319 1.000283 GATCCACATGCTAGAGGACGG 60.000 57.143 0.00 0.00 30.97 4.79
2180 3320 1.959985 AGATCCACATGCTAGAGGACG 59.040 52.381 0.00 0.00 30.97 4.79
2181 3321 2.697751 ACAGATCCACATGCTAGAGGAC 59.302 50.000 0.00 0.00 30.97 3.85
2182 3322 3.037851 ACAGATCCACATGCTAGAGGA 57.962 47.619 0.00 0.00 32.77 3.71
2183 3323 3.726607 GAACAGATCCACATGCTAGAGG 58.273 50.000 0.00 0.00 0.00 3.69
2196 3336 7.468141 AAAAATACAAGGAAGGGAACAGATC 57.532 36.000 0.00 0.00 0.00 2.75
2232 3372 9.249457 CGGCCTTATACTATATTGATACATGTG 57.751 37.037 9.11 0.00 0.00 3.21
2233 3373 8.421784 CCGGCCTTATACTATATTGATACATGT 58.578 37.037 2.69 2.69 0.00 3.21
2234 3374 7.385205 GCCGGCCTTATACTATATTGATACATG 59.615 40.741 18.11 0.00 0.00 3.21
2235 3375 7.442656 GCCGGCCTTATACTATATTGATACAT 58.557 38.462 18.11 0.00 0.00 2.29
2236 3376 6.183360 GGCCGGCCTTATACTATATTGATACA 60.183 42.308 38.76 0.00 0.00 2.29
2237 3377 6.183360 TGGCCGGCCTTATACTATATTGATAC 60.183 42.308 43.34 12.88 36.94 2.24
2238 3378 5.900699 TGGCCGGCCTTATACTATATTGATA 59.099 40.000 43.34 16.66 36.94 2.15
2239 3379 4.719773 TGGCCGGCCTTATACTATATTGAT 59.280 41.667 43.34 0.00 36.94 2.57
2240 3380 4.098155 TGGCCGGCCTTATACTATATTGA 58.902 43.478 43.34 17.81 36.94 2.57
2241 3381 4.442706 CTGGCCGGCCTTATACTATATTG 58.557 47.826 43.34 14.39 36.94 1.90
2242 3382 3.454812 CCTGGCCGGCCTTATACTATATT 59.545 47.826 43.34 0.00 36.94 1.28
2243 3383 3.039011 CCTGGCCGGCCTTATACTATAT 58.961 50.000 43.34 0.00 36.94 0.86
2244 3384 2.225445 ACCTGGCCGGCCTTATACTATA 60.225 50.000 43.34 21.12 36.94 1.31
2245 3385 1.276622 CCTGGCCGGCCTTATACTAT 58.723 55.000 43.34 0.00 36.94 2.12
2246 3386 0.105349 ACCTGGCCGGCCTTATACTA 60.105 55.000 43.34 22.68 36.94 1.82
2247 3387 1.384082 ACCTGGCCGGCCTTATACT 60.384 57.895 43.34 18.67 36.94 2.12
2248 3388 1.227853 CACCTGGCCGGCCTTATAC 60.228 63.158 43.34 19.10 36.94 1.47
2249 3389 3.114825 GCACCTGGCCGGCCTTATA 62.115 63.158 43.34 24.65 36.11 0.98
2250 3390 4.506255 GCACCTGGCCGGCCTTAT 62.506 66.667 43.34 26.58 36.11 1.73
2256 3396 0.751277 TAATCAATGCACCTGGCCGG 60.751 55.000 3.88 3.88 43.89 6.13
2257 3397 0.381801 GTAATCAATGCACCTGGCCG 59.618 55.000 0.00 0.00 43.89 6.13
2258 3398 0.381801 CGTAATCAATGCACCTGGCC 59.618 55.000 0.00 0.00 43.89 5.36
2259 3399 1.378531 TCGTAATCAATGCACCTGGC 58.621 50.000 0.00 0.00 45.13 4.85
2260 3400 3.205338 TGATCGTAATCAATGCACCTGG 58.795 45.455 0.00 0.00 38.97 4.45
2261 3401 3.303593 GCTGATCGTAATCAATGCACCTG 60.304 47.826 0.00 0.00 41.33 4.00
2262 3402 2.874701 GCTGATCGTAATCAATGCACCT 59.125 45.455 0.00 0.00 41.33 4.00
2263 3403 2.613595 TGCTGATCGTAATCAATGCACC 59.386 45.455 0.00 0.00 41.33 5.01
2264 3404 3.950087 TGCTGATCGTAATCAATGCAC 57.050 42.857 0.00 0.00 41.33 4.57
2265 3405 3.940852 AGTTGCTGATCGTAATCAATGCA 59.059 39.130 0.00 0.00 41.33 3.96
2266 3406 4.542662 AGTTGCTGATCGTAATCAATGC 57.457 40.909 0.00 0.00 41.33 3.56
2267 3407 6.257411 AGAGAAGTTGCTGATCGTAATCAATG 59.743 38.462 0.00 0.00 41.33 2.82
2268 3408 6.257411 CAGAGAAGTTGCTGATCGTAATCAAT 59.743 38.462 0.00 0.00 41.33 2.57
2269 3409 5.578336 CAGAGAAGTTGCTGATCGTAATCAA 59.422 40.000 0.00 0.00 41.33 2.57
2270 3410 5.105063 CAGAGAAGTTGCTGATCGTAATCA 58.895 41.667 0.00 0.00 39.63 2.57
2271 3411 4.026145 GCAGAGAAGTTGCTGATCGTAATC 60.026 45.833 6.53 0.00 38.51 1.75
2272 3412 3.868077 GCAGAGAAGTTGCTGATCGTAAT 59.132 43.478 6.53 0.00 38.51 1.89
2273 3413 3.254060 GCAGAGAAGTTGCTGATCGTAA 58.746 45.455 6.53 0.00 38.51 3.18
2274 3414 2.732282 CGCAGAGAAGTTGCTGATCGTA 60.732 50.000 6.53 0.00 39.38 3.43
2275 3415 1.719600 GCAGAGAAGTTGCTGATCGT 58.280 50.000 6.53 0.00 38.51 3.73
2276 3416 0.644331 CGCAGAGAAGTTGCTGATCG 59.356 55.000 6.53 0.00 39.38 3.69
2277 3417 0.373024 GCGCAGAGAAGTTGCTGATC 59.627 55.000 0.30 0.00 39.38 2.92
2278 3418 0.321034 TGCGCAGAGAAGTTGCTGAT 60.321 50.000 5.66 0.00 39.38 2.90
2279 3419 1.069596 TGCGCAGAGAAGTTGCTGA 59.930 52.632 5.66 0.00 39.38 4.26
2280 3420 1.206072 GTGCGCAGAGAAGTTGCTG 59.794 57.895 12.22 0.00 39.38 4.41
2281 3421 2.313172 CGTGCGCAGAGAAGTTGCT 61.313 57.895 12.22 0.00 39.38 3.91
2282 3422 2.171940 CGTGCGCAGAGAAGTTGC 59.828 61.111 12.22 0.00 38.18 4.17
2283 3423 2.856032 CCGTGCGCAGAGAAGTTG 59.144 61.111 12.22 0.00 0.00 3.16
2284 3424 3.044305 GCCGTGCGCAGAGAAGTT 61.044 61.111 12.22 0.00 37.47 2.66
2285 3425 3.923563 GAGCCGTGCGCAGAGAAGT 62.924 63.158 12.22 0.00 41.38 3.01
2286 3426 3.184683 GAGCCGTGCGCAGAGAAG 61.185 66.667 12.22 0.00 41.38 2.85
2287 3427 3.513768 TTGAGCCGTGCGCAGAGAA 62.514 57.895 12.22 0.00 39.77 2.87
2288 3428 3.989787 TTGAGCCGTGCGCAGAGA 61.990 61.111 12.22 0.00 39.77 3.10
2289 3429 3.782244 GTTGAGCCGTGCGCAGAG 61.782 66.667 12.22 8.31 39.77 3.35
2290 3430 3.881952 ATGTTGAGCCGTGCGCAGA 62.882 57.895 12.22 0.00 39.77 4.26
2291 3431 2.462255 AAATGTTGAGCCGTGCGCAG 62.462 55.000 12.22 0.00 39.77 5.18
2292 3432 2.069465 AAAATGTTGAGCCGTGCGCA 62.069 50.000 5.66 5.66 41.38 6.09
2293 3433 0.939106 AAAAATGTTGAGCCGTGCGC 60.939 50.000 0.00 0.00 37.98 6.09
2294 3434 1.052287 GAAAAATGTTGAGCCGTGCG 58.948 50.000 0.00 0.00 0.00 5.34
2295 3435 1.000274 AGGAAAAATGTTGAGCCGTGC 60.000 47.619 0.00 0.00 0.00 5.34
2296 3436 2.034558 ACAGGAAAAATGTTGAGCCGTG 59.965 45.455 0.00 0.00 0.00 4.94
2297 3437 2.034558 CACAGGAAAAATGTTGAGCCGT 59.965 45.455 0.00 0.00 0.00 5.68
2298 3438 2.664916 CACAGGAAAAATGTTGAGCCG 58.335 47.619 0.00 0.00 0.00 5.52
2299 3439 2.407090 GCACAGGAAAAATGTTGAGCC 58.593 47.619 0.00 0.00 0.00 4.70
2300 3440 2.407090 GGCACAGGAAAAATGTTGAGC 58.593 47.619 0.00 0.00 0.00 4.26
2301 3441 2.293122 TCGGCACAGGAAAAATGTTGAG 59.707 45.455 0.00 0.00 0.00 3.02
2302 3442 2.293122 CTCGGCACAGGAAAAATGTTGA 59.707 45.455 0.00 0.00 0.00 3.18
2303 3443 2.664916 CTCGGCACAGGAAAAATGTTG 58.335 47.619 0.00 0.00 0.00 3.33
2304 3444 1.000274 GCTCGGCACAGGAAAAATGTT 60.000 47.619 0.00 0.00 0.00 2.71
2305 3445 0.598065 GCTCGGCACAGGAAAAATGT 59.402 50.000 0.00 0.00 0.00 2.71
2306 3446 0.883833 AGCTCGGCACAGGAAAAATG 59.116 50.000 0.00 0.00 0.00 2.32
2307 3447 0.883833 CAGCTCGGCACAGGAAAAAT 59.116 50.000 0.00 0.00 0.00 1.82
2308 3448 0.179032 TCAGCTCGGCACAGGAAAAA 60.179 50.000 0.00 0.00 0.00 1.94
2309 3449 0.036732 ATCAGCTCGGCACAGGAAAA 59.963 50.000 0.00 0.00 0.00 2.29
2310 3450 0.391661 GATCAGCTCGGCACAGGAAA 60.392 55.000 0.00 0.00 0.00 3.13
2311 3451 1.219124 GATCAGCTCGGCACAGGAA 59.781 57.895 0.00 0.00 0.00 3.36
2312 3452 2.725312 GGATCAGCTCGGCACAGGA 61.725 63.158 0.00 0.00 0.00 3.86
2313 3453 2.202987 GGATCAGCTCGGCACAGG 60.203 66.667 0.00 0.00 0.00 4.00
2314 3454 0.879400 GATGGATCAGCTCGGCACAG 60.879 60.000 0.00 0.00 0.00 3.66
2315 3455 1.144716 GATGGATCAGCTCGGCACA 59.855 57.895 0.00 0.00 0.00 4.57
2316 3456 0.599728 GAGATGGATCAGCTCGGCAC 60.600 60.000 0.00 0.00 37.16 5.01
2317 3457 1.744639 GAGATGGATCAGCTCGGCA 59.255 57.895 0.00 0.00 37.16 5.69
2318 3458 1.005156 GGAGATGGATCAGCTCGGC 60.005 63.158 7.02 0.00 46.36 5.54
2319 3459 0.602562 GAGGAGATGGATCAGCTCGG 59.397 60.000 7.02 0.00 46.36 4.63
2320 3460 1.000385 GTGAGGAGATGGATCAGCTCG 60.000 57.143 7.02 0.00 46.36 5.03
2321 3461 2.036217 CTGTGAGGAGATGGATCAGCTC 59.964 54.545 4.77 4.77 44.92 4.09
2322 3462 2.040939 CTGTGAGGAGATGGATCAGCT 58.959 52.381 0.00 0.00 30.65 4.24
2323 3463 1.070445 CCTGTGAGGAGATGGATCAGC 59.930 57.143 0.00 0.00 37.67 4.26
2324 3464 1.693062 CCCTGTGAGGAGATGGATCAG 59.307 57.143 0.00 0.00 37.67 2.90
2325 3465 1.008815 ACCCTGTGAGGAGATGGATCA 59.991 52.381 0.00 0.00 37.67 2.92
2326 3466 1.691434 GACCCTGTGAGGAGATGGATC 59.309 57.143 0.00 0.00 37.67 3.36
2327 3467 1.799933 GACCCTGTGAGGAGATGGAT 58.200 55.000 0.00 0.00 37.67 3.41
2328 3468 0.684479 CGACCCTGTGAGGAGATGGA 60.684 60.000 0.00 0.00 37.67 3.41
2329 3469 1.680522 CCGACCCTGTGAGGAGATGG 61.681 65.000 0.00 0.00 37.67 3.51
2330 3470 1.819229 CCGACCCTGTGAGGAGATG 59.181 63.158 0.00 0.00 37.67 2.90
2331 3471 2.060980 GCCGACCCTGTGAGGAGAT 61.061 63.158 0.00 0.00 37.67 2.75
2332 3472 2.680352 GCCGACCCTGTGAGGAGA 60.680 66.667 0.00 0.00 37.67 3.71
2333 3473 2.681778 AGCCGACCCTGTGAGGAG 60.682 66.667 0.00 0.00 37.67 3.69
2334 3474 1.859841 TAGAGCCGACCCTGTGAGGA 61.860 60.000 0.00 0.00 37.67 3.71
2335 3475 0.757188 ATAGAGCCGACCCTGTGAGG 60.757 60.000 0.00 0.00 34.30 3.86
2336 3476 0.387202 CATAGAGCCGACCCTGTGAG 59.613 60.000 0.00 0.00 0.00 3.51
2337 3477 0.324368 ACATAGAGCCGACCCTGTGA 60.324 55.000 0.00 0.00 0.00 3.58
2345 3485 1.406341 CCCCGAAAAACATAGAGCCGA 60.406 52.381 0.00 0.00 0.00 5.54
2471 3612 7.497925 AACTACTGAAGAATTGTTTGAGGTC 57.502 36.000 0.00 0.00 0.00 3.85
2472 3613 7.556275 TGAAACTACTGAAGAATTGTTTGAGGT 59.444 33.333 0.00 0.00 0.00 3.85
2473 3614 7.930217 TGAAACTACTGAAGAATTGTTTGAGG 58.070 34.615 0.00 0.00 0.00 3.86
2492 3633 7.394359 TGCAGCTTTAGGATCTAAATTGAAACT 59.606 33.333 0.00 0.00 0.00 2.66
2493 3634 7.538575 TGCAGCTTTAGGATCTAAATTGAAAC 58.461 34.615 0.00 0.00 0.00 2.78
2494 3635 7.701539 TGCAGCTTTAGGATCTAAATTGAAA 57.298 32.000 0.00 0.00 0.00 2.69
2495 3636 7.701539 TTGCAGCTTTAGGATCTAAATTGAA 57.298 32.000 0.00 3.98 0.00 2.69
2496 3637 7.701539 TTTGCAGCTTTAGGATCTAAATTGA 57.298 32.000 0.00 0.00 0.00 2.57
2497 3638 8.761575 TTTTTGCAGCTTTAGGATCTAAATTG 57.238 30.769 0.00 4.84 0.00 2.32
2608 6493 5.048713 GTGATTCCCGTCTTGATTTTCTTGT 60.049 40.000 0.00 0.00 0.00 3.16
2641 6526 4.263905 TGCAATCAGGTGGACCTTTAATCT 60.264 41.667 0.00 0.00 46.09 2.40
2651 6536 1.676635 GCTGCTGCAATCAGGTGGA 60.677 57.895 11.11 0.00 40.65 4.02
2824 6718 1.278127 CTACGGGAGAGGAAAAGGCAA 59.722 52.381 0.00 0.00 0.00 4.52
2978 6877 1.924731 AATGAGTCCGTGTGAGGAGA 58.075 50.000 0.00 0.00 41.68 3.71
2979 6878 3.193691 AGTTAATGAGTCCGTGTGAGGAG 59.806 47.826 0.00 0.00 41.68 3.69
2980 6879 3.162666 AGTTAATGAGTCCGTGTGAGGA 58.837 45.455 0.00 0.00 38.11 3.71
2981 6880 3.512680 GAGTTAATGAGTCCGTGTGAGG 58.487 50.000 0.00 0.00 0.00 3.86
2982 6881 3.512680 GGAGTTAATGAGTCCGTGTGAG 58.487 50.000 0.00 0.00 38.09 3.51
2983 6882 3.587797 GGAGTTAATGAGTCCGTGTGA 57.412 47.619 0.00 0.00 38.09 3.58
2989 6888 1.212195 GGTGGGGGAGTTAATGAGTCC 59.788 57.143 0.00 0.00 45.71 3.85
2990 6889 1.212195 GGGTGGGGGAGTTAATGAGTC 59.788 57.143 0.00 0.00 0.00 3.36
2991 6890 1.296002 GGGTGGGGGAGTTAATGAGT 58.704 55.000 0.00 0.00 0.00 3.41
2992 6891 0.551396 GGGGTGGGGGAGTTAATGAG 59.449 60.000 0.00 0.00 0.00 2.90
2993 6892 0.178828 TGGGGTGGGGGAGTTAATGA 60.179 55.000 0.00 0.00 0.00 2.57
2994 6893 0.033503 GTGGGGTGGGGGAGTTAATG 60.034 60.000 0.00 0.00 0.00 1.90
2995 6894 1.219131 GGTGGGGTGGGGGAGTTAAT 61.219 60.000 0.00 0.00 0.00 1.40
2996 6895 1.853565 GGTGGGGTGGGGGAGTTAA 60.854 63.158 0.00 0.00 0.00 2.01
2997 6896 2.204182 GGTGGGGTGGGGGAGTTA 60.204 66.667 0.00 0.00 0.00 2.24
3012 6911 3.733445 TATAAGGCACTGGGTCGGGGT 62.733 57.143 0.00 0.00 40.86 4.95
3013 6912 1.052124 TATAAGGCACTGGGTCGGGG 61.052 60.000 0.00 0.00 40.86 5.73
3014 6913 0.834612 TTATAAGGCACTGGGTCGGG 59.165 55.000 0.00 0.00 40.86 5.14
3015 6914 2.930826 ATTATAAGGCACTGGGTCGG 57.069 50.000 0.00 0.00 40.86 4.79
3016 6915 9.832445 ATATAAATATTATAAGGCACTGGGTCG 57.168 33.333 0.00 0.00 40.86 4.79
3032 6931 9.425248 CTTGCATGGTGGGGATATATAAATATT 57.575 33.333 0.00 0.00 0.00 1.28
3033 6932 8.568723 ACTTGCATGGTGGGGATATATAAATAT 58.431 33.333 4.44 0.00 0.00 1.28
3034 6933 7.938686 ACTTGCATGGTGGGGATATATAAATA 58.061 34.615 4.44 0.00 0.00 1.40
3035 6934 6.804083 ACTTGCATGGTGGGGATATATAAAT 58.196 36.000 4.44 0.00 0.00 1.40
3036 6935 6.212840 ACTTGCATGGTGGGGATATATAAA 57.787 37.500 4.44 0.00 0.00 1.40
3037 6936 5.858876 ACTTGCATGGTGGGGATATATAA 57.141 39.130 4.44 0.00 0.00 0.98
3038 6937 6.029431 ACTACTTGCATGGTGGGGATATATA 58.971 40.000 4.44 0.00 0.00 0.86
3039 6938 4.852118 ACTACTTGCATGGTGGGGATATAT 59.148 41.667 4.44 0.00 0.00 0.86
3040 6939 4.239495 ACTACTTGCATGGTGGGGATATA 58.761 43.478 4.44 0.00 0.00 0.86
3041 6940 3.056080 ACTACTTGCATGGTGGGGATAT 58.944 45.455 4.44 0.00 0.00 1.63
3042 6941 2.487775 ACTACTTGCATGGTGGGGATA 58.512 47.619 4.44 0.00 0.00 2.59
3043 6942 1.298953 ACTACTTGCATGGTGGGGAT 58.701 50.000 4.44 0.00 0.00 3.85
3044 6943 1.837439 CTACTACTTGCATGGTGGGGA 59.163 52.381 4.44 0.00 0.00 4.81
3045 6944 1.559682 ACTACTACTTGCATGGTGGGG 59.440 52.381 4.44 2.15 0.00 4.96
3046 6945 4.189231 GTTACTACTACTTGCATGGTGGG 58.811 47.826 4.44 0.42 0.00 4.61
3047 6946 3.863424 CGTTACTACTACTTGCATGGTGG 59.137 47.826 4.44 3.61 0.00 4.61
3048 6947 4.740268 TCGTTACTACTACTTGCATGGTG 58.260 43.478 4.44 0.00 0.00 4.17
3049 6948 5.184479 TCTTCGTTACTACTACTTGCATGGT 59.816 40.000 4.44 1.45 0.00 3.55
3050 6949 5.515626 GTCTTCGTTACTACTACTTGCATGG 59.484 44.000 4.44 0.00 0.00 3.66
3051 6950 5.227391 CGTCTTCGTTACTACTACTTGCATG 59.773 44.000 0.00 0.00 0.00 4.06
3052 6951 5.330295 CGTCTTCGTTACTACTACTTGCAT 58.670 41.667 0.00 0.00 0.00 3.96
3053 6952 4.715896 CGTCTTCGTTACTACTACTTGCA 58.284 43.478 0.00 0.00 0.00 4.08


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.