Multiple sequence alignment - TraesCS4A01G428000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G428000 chr4A 100.000 5165 0 0 1 5165 698890429 698885265 0.000000e+00 9539.0
1 TraesCS4A01G428000 chr4A 93.021 3410 166 32 462 3845 698107470 698104107 0.000000e+00 4913.0
2 TraesCS4A01G428000 chr4A 84.638 345 52 1 1 345 281701627 281701970 4.950000e-90 342.0
3 TraesCS4A01G428000 chr4A 87.059 85 11 0 5081 5165 544873524 544873608 4.260000e-16 97.1
4 TraesCS4A01G428000 chr7A 91.097 2617 147 23 1020 3572 30673886 30676480 0.000000e+00 3463.0
5 TraesCS4A01G428000 chr7A 90.754 1233 84 8 3867 5078 30682992 30684215 0.000000e+00 1618.0
6 TraesCS4A01G428000 chr7A 82.335 668 82 20 346 987 30673154 30673811 9.780000e-152 547.0
7 TraesCS4A01G428000 chr7A 96.454 282 9 1 3568 3849 30682646 30682926 1.010000e-126 464.0
8 TraesCS4A01G428000 chr7A 85.714 441 53 9 4635 5072 725737355 725736922 1.700000e-124 457.0
9 TraesCS4A01G428000 chr7A 92.453 53 4 0 1868 1920 727882041 727881989 5.550000e-10 76.8
10 TraesCS4A01G428000 chr7D 91.887 2009 96 14 1681 3645 30285668 30287653 0.000000e+00 2745.0
11 TraesCS4A01G428000 chr7D 92.049 1308 83 5 1140 2430 30284364 30285667 0.000000e+00 1820.0
12 TraesCS4A01G428000 chr7D 91.766 668 26 8 3842 4483 30289329 30289993 0.000000e+00 902.0
13 TraesCS4A01G428000 chr7D 83.784 444 50 12 4633 5074 183683 184106 8.060000e-108 401.0
14 TraesCS4A01G428000 chr7D 94.419 215 11 1 3631 3845 30289078 30289291 3.860000e-86 329.0
15 TraesCS4A01G428000 chr7D 92.511 227 17 0 861 1087 30284129 30284355 4.990000e-85 326.0
16 TraesCS4A01G428000 chr7D 83.090 343 56 2 2 343 316202700 316203041 1.400000e-80 311.0
17 TraesCS4A01G428000 chr7D 86.607 112 11 4 4523 4632 348998711 348998820 2.530000e-23 121.0
18 TraesCS4A01G428000 chrUn 92.936 1175 56 5 3842 4995 380100506 380101674 0.000000e+00 1685.0
19 TraesCS4A01G428000 chrUn 81.556 450 71 8 4633 5078 132107306 132107747 1.370000e-95 361.0
20 TraesCS4A01G428000 chrUn 86.517 89 11 1 5078 5165 60938587 60938499 4.260000e-16 97.1
21 TraesCS4A01G428000 chr6A 89.844 1221 69 18 2457 3642 226068771 226069971 0.000000e+00 1517.0
22 TraesCS4A01G428000 chr6A 79.847 655 86 21 3911 4526 226070633 226071280 2.210000e-118 436.0
23 TraesCS4A01G428000 chr6A 86.038 265 28 6 1095 1355 226067030 226067289 5.090000e-70 276.0
24 TraesCS4A01G428000 chr6A 87.562 201 25 0 1583 1783 226068574 226068774 3.110000e-57 233.0
25 TraesCS4A01G428000 chr6A 81.567 217 26 7 3641 3845 226070271 226070485 3.200000e-37 167.0
26 TraesCS4A01G428000 chr6A 86.555 119 9 5 866 980 226066707 226066822 1.950000e-24 124.0
27 TraesCS4A01G428000 chr6D 89.353 1221 75 20 2457 3642 170963620 170964820 0.000000e+00 1483.0
28 TraesCS4A01G428000 chr6D 80.245 653 83 20 3911 4526 170965479 170966122 2.840000e-122 449.0
29 TraesCS4A01G428000 chr6D 83.482 448 60 9 4633 5074 362865510 362865071 6.230000e-109 405.0
30 TraesCS4A01G428000 chr6D 83.333 432 55 8 4633 5061 293809325 293808908 2.920000e-102 383.0
31 TraesCS4A01G428000 chr6D 86.268 284 31 5 2153 2428 121633196 121633479 8.410000e-78 302.0
32 TraesCS4A01G428000 chr6D 86.415 265 27 6 1095 1355 170961881 170962140 1.090000e-71 281.0
33 TraesCS4A01G428000 chr6D 88.060 201 24 0 1583 1783 170963423 170963623 6.680000e-59 239.0
34 TraesCS4A01G428000 chr6D 81.193 218 23 9 3641 3845 170965122 170965334 5.350000e-35 159.0
35 TraesCS4A01G428000 chr6D 88.679 106 10 2 4528 4632 165407305 165407409 1.510000e-25 128.0
36 TraesCS4A01G428000 chr6D 89.744 78 6 2 890 967 170961593 170961668 1.180000e-16 99.0
37 TraesCS4A01G428000 chr6B 89.242 1227 77 17 2460 3651 384964001 384962795 0.000000e+00 1483.0
38 TraesCS4A01G428000 chr6B 80.675 652 81 18 3911 4526 384962141 384961499 1.010000e-126 464.0
39 TraesCS4A01G428000 chr6B 84.726 347 50 3 1 346 44766352 44766008 1.380000e-90 344.0
40 TraesCS4A01G428000 chr6B 86.038 265 25 7 1095 1355 384965761 384965505 1.830000e-69 274.0
41 TraesCS4A01G428000 chr6B 88.060 201 24 0 1583 1783 384964201 384964001 6.680000e-59 239.0
42 TraesCS4A01G428000 chr6B 82.028 217 25 7 3641 3845 384962501 384962287 6.880000e-39 172.0
43 TraesCS4A01G428000 chr6B 85.714 112 8 3 872 980 384966074 384965968 1.520000e-20 111.0
44 TraesCS4A01G428000 chr5D 89.507 629 50 10 1776 2392 365031235 365031859 0.000000e+00 782.0
45 TraesCS4A01G428000 chr5D 80.523 344 60 7 2 343 331068122 331068460 1.850000e-64 257.0
46 TraesCS4A01G428000 chr5D 88.679 106 9 3 4529 4632 259400074 259399970 5.430000e-25 126.0
47 TraesCS4A01G428000 chr5B 88.174 668 59 6 1783 2432 250923439 250924104 0.000000e+00 778.0
48 TraesCS4A01G428000 chr1B 87.463 678 64 5 1775 2433 632703498 632702823 0.000000e+00 761.0
49 TraesCS4A01G428000 chr1B 89.868 227 23 0 2207 2433 387757935 387757709 5.060000e-75 292.0
50 TraesCS4A01G428000 chr1B 80.758 343 65 1 3 345 128027415 128027756 3.070000e-67 267.0
51 TraesCS4A01G428000 chr1B 87.059 85 11 0 5081 5165 74213981 74213897 4.260000e-16 97.1
52 TraesCS4A01G428000 chr1B 92.982 57 4 0 568 624 391967613 391967669 3.310000e-12 84.2
53 TraesCS4A01G428000 chr4B 84.410 449 52 11 4633 5073 17238236 17238674 4.780000e-115 425.0
54 TraesCS4A01G428000 chr1D 87.106 349 42 3 1 348 288080337 288080683 4.850000e-105 392.0
55 TraesCS4A01G428000 chr1D 90.000 100 8 2 4534 4632 334222969 334222871 1.510000e-25 128.0
56 TraesCS4A01G428000 chr7B 83.066 437 64 9 4633 5066 199755291 199755720 6.270000e-104 388.0
57 TraesCS4A01G428000 chr7B 83.041 342 53 4 6 345 203021061 203021399 6.500000e-79 305.0
58 TraesCS4A01G428000 chr7B 89.286 84 9 0 5082 5165 378355069 378354986 7.070000e-19 106.0
59 TraesCS4A01G428000 chr3A 83.526 346 54 3 1 345 185026976 185027319 2.320000e-83 320.0
60 TraesCS4A01G428000 chr3A 90.045 221 22 0 2207 2427 45582248 45582468 2.350000e-73 287.0
61 TraesCS4A01G428000 chr2B 82.558 344 51 7 4 345 486511536 486511200 1.410000e-75 294.0
62 TraesCS4A01G428000 chr2B 89.030 237 26 0 2207 2443 773173018 773172782 1.410000e-75 294.0
63 TraesCS4A01G428000 chr3D 89.423 104 11 0 4529 4632 209742704 209742601 1.170000e-26 132.0
64 TraesCS4A01G428000 chr3D 89.524 105 9 2 4529 4632 375675830 375675933 1.170000e-26 132.0
65 TraesCS4A01G428000 chr3D 88.235 85 10 0 5081 5165 52049012 52049096 9.150000e-18 102.0
66 TraesCS4A01G428000 chr3B 86.607 112 13 2 4522 4632 610289976 610289866 7.020000e-24 122.0
67 TraesCS4A01G428000 chr3B 89.024 82 9 0 5081 5162 385770597 385770678 9.150000e-18 102.0
68 TraesCS4A01G428000 chr3B 88.235 85 10 0 5081 5165 666230632 666230716 9.150000e-18 102.0
69 TraesCS4A01G428000 chr2D 87.209 86 11 0 5080 5165 574356946 574357031 1.180000e-16 99.0
70 TraesCS4A01G428000 chr5A 87.059 85 11 0 5081 5165 476434445 476434529 4.260000e-16 97.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G428000 chr4A 698885265 698890429 5164 True 9539.000000 9539 100.000000 1 5165 1 chr4A.!!$R2 5164
1 TraesCS4A01G428000 chr4A 698104107 698107470 3363 True 4913.000000 4913 93.021000 462 3845 1 chr4A.!!$R1 3383
2 TraesCS4A01G428000 chr7A 30673154 30676480 3326 False 2005.000000 3463 86.716000 346 3572 2 chr7A.!!$F1 3226
3 TraesCS4A01G428000 chr7A 30682646 30684215 1569 False 1041.000000 1618 93.604000 3568 5078 2 chr7A.!!$F2 1510
4 TraesCS4A01G428000 chr7D 30284129 30289993 5864 False 1224.400000 2745 92.526400 861 4483 5 chr7D.!!$F4 3622
5 TraesCS4A01G428000 chrUn 380100506 380101674 1168 False 1685.000000 1685 92.936000 3842 4995 1 chrUn.!!$F2 1153
6 TraesCS4A01G428000 chr6A 226066707 226071280 4573 False 458.833333 1517 85.235500 866 4526 6 chr6A.!!$F1 3660
7 TraesCS4A01G428000 chr6D 170961593 170966122 4529 False 451.666667 1483 85.835000 890 4526 6 chr6D.!!$F3 3636
8 TraesCS4A01G428000 chr6B 384961499 384966074 4575 True 457.166667 1483 85.292833 872 4526 6 chr6B.!!$R2 3654
9 TraesCS4A01G428000 chr5D 365031235 365031859 624 False 782.000000 782 89.507000 1776 2392 1 chr5D.!!$F2 616
10 TraesCS4A01G428000 chr5B 250923439 250924104 665 False 778.000000 778 88.174000 1783 2432 1 chr5B.!!$F1 649
11 TraesCS4A01G428000 chr1B 632702823 632703498 675 True 761.000000 761 87.463000 1775 2433 1 chr1B.!!$R3 658

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
512 513 0.033109 CATTGGGGAAGGAAGGGACC 60.033 60.0 0.0 0.0 0.00 4.46 F
689 701 0.250234 CTTCCAGCCATGACGGAGAA 59.750 55.0 0.0 0.0 36.56 2.87 F
702 714 1.036707 CGGAGAAGGTGGGAGAGATC 58.963 60.0 0.0 0.0 0.00 2.75 F
2353 3625 0.602638 TCAGCAACGCTCGGATTTGT 60.603 50.0 0.0 0.0 36.40 2.83 F
3524 5608 0.955428 GCGCTCTCATTGTCCAACCA 60.955 55.0 0.0 0.0 0.00 3.67 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1373 1522 2.333389 AGAGTTACTGACGACGCTTG 57.667 50.000 0.00 0.0 0.00 4.01 R
1723 2971 3.449018 ACCTTCTGTGCGATAGATTGTCT 59.551 43.478 0.00 0.0 39.76 3.41 R
2543 4585 3.490759 CTAGCAACGCTGGCACCG 61.491 66.667 0.00 0.0 40.10 4.94 R
4131 8074 0.911769 CAGGGGCAGTATCACTTCCA 59.088 55.000 0.00 0.0 32.91 3.53 R
5139 9138 1.269012 ACGAATACAGAAACCCCGGA 58.731 50.000 0.73 0.0 0.00 5.14 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.124860 GTCGCCGGGGCACTTAAT 60.125 61.111 14.85 0.00 42.06 1.40
18 19 2.124901 TCGCCGGGGCACTTAATG 60.125 61.111 14.85 0.00 42.06 1.90
33 34 6.908870 CACTTAATGCTCATAACTACAGCA 57.091 37.500 0.00 0.00 46.87 4.41
34 35 6.941802 CACTTAATGCTCATAACTACAGCAG 58.058 40.000 0.00 0.00 46.06 4.24
35 36 6.536582 CACTTAATGCTCATAACTACAGCAGT 59.463 38.462 0.00 0.00 46.06 4.40
36 37 7.065085 CACTTAATGCTCATAACTACAGCAGTT 59.935 37.037 0.00 0.00 46.06 3.16
46 47 5.540400 AACTACAGCAGTTACAGGTGTAA 57.460 39.130 17.66 0.00 45.93 2.41
47 48 5.540400 ACTACAGCAGTTACAGGTGTAAA 57.460 39.130 17.66 2.66 45.77 2.01
48 49 5.539048 ACTACAGCAGTTACAGGTGTAAAG 58.461 41.667 17.66 12.67 45.77 1.85
49 50 3.139077 ACAGCAGTTACAGGTGTAAAGC 58.861 45.455 10.70 15.56 44.95 3.51
50 51 2.157668 CAGCAGTTACAGGTGTAAAGCG 59.842 50.000 16.58 11.17 43.02 4.68
51 52 1.136057 GCAGTTACAGGTGTAAAGCGC 60.136 52.381 0.00 0.00 41.58 5.92
57 58 2.127003 GGTGTAAAGCGCCGCAAC 60.127 61.111 13.36 7.10 38.09 4.17
58 59 2.613506 GGTGTAAAGCGCCGCAACT 61.614 57.895 13.36 0.00 38.09 3.16
59 60 1.293267 GGTGTAAAGCGCCGCAACTA 61.293 55.000 13.36 0.00 38.09 2.24
60 61 0.179233 GTGTAAAGCGCCGCAACTAC 60.179 55.000 13.36 9.95 0.00 2.73
61 62 0.600518 TGTAAAGCGCCGCAACTACA 60.601 50.000 13.36 12.55 0.00 2.74
62 63 0.094730 GTAAAGCGCCGCAACTACAG 59.905 55.000 13.36 0.00 0.00 2.74
63 64 0.320073 TAAAGCGCCGCAACTACAGT 60.320 50.000 13.36 0.00 0.00 3.55
64 65 1.841663 AAAGCGCCGCAACTACAGTG 61.842 55.000 13.36 0.00 0.00 3.66
65 66 3.788766 GCGCCGCAACTACAGTGG 61.789 66.667 3.15 0.00 39.63 4.00
66 67 2.357034 CGCCGCAACTACAGTGGT 60.357 61.111 0.00 0.00 38.87 4.16
67 68 1.959226 CGCCGCAACTACAGTGGTT 60.959 57.895 0.00 0.00 38.87 3.67
68 69 0.668096 CGCCGCAACTACAGTGGTTA 60.668 55.000 1.35 0.00 38.87 2.85
69 70 1.734163 GCCGCAACTACAGTGGTTAT 58.266 50.000 1.35 0.00 38.87 1.89
70 71 2.736081 CGCCGCAACTACAGTGGTTATA 60.736 50.000 1.35 0.00 38.87 0.98
71 72 2.864343 GCCGCAACTACAGTGGTTATAG 59.136 50.000 1.35 0.00 38.87 1.31
72 73 3.454375 CCGCAACTACAGTGGTTATAGG 58.546 50.000 1.35 2.93 32.04 2.57
73 74 3.118884 CCGCAACTACAGTGGTTATAGGT 60.119 47.826 1.35 0.00 32.04 3.08
74 75 4.098349 CCGCAACTACAGTGGTTATAGGTA 59.902 45.833 1.35 0.00 32.04 3.08
75 76 5.394443 CCGCAACTACAGTGGTTATAGGTAA 60.394 44.000 1.35 0.00 32.04 2.85
76 77 5.517770 CGCAACTACAGTGGTTATAGGTAAC 59.482 44.000 1.35 0.00 39.57 2.50
77 78 6.400568 GCAACTACAGTGGTTATAGGTAACA 58.599 40.000 1.35 0.00 41.59 2.41
78 79 6.875195 GCAACTACAGTGGTTATAGGTAACAA 59.125 38.462 1.35 0.00 41.59 2.83
79 80 7.551617 GCAACTACAGTGGTTATAGGTAACAAT 59.448 37.037 1.35 0.00 41.59 2.71
82 83 8.419442 ACTACAGTGGTTATAGGTAACAATAGC 58.581 37.037 0.00 0.00 41.59 2.97
83 84 7.433537 ACAGTGGTTATAGGTAACAATAGCT 57.566 36.000 0.00 0.00 41.59 3.32
84 85 8.543293 ACAGTGGTTATAGGTAACAATAGCTA 57.457 34.615 0.00 0.00 43.99 3.32
86 87 9.424319 CAGTGGTTATAGGTAACAATAGCTATG 57.576 37.037 7.09 4.43 46.86 2.23
87 88 9.375974 AGTGGTTATAGGTAACAATAGCTATGA 57.624 33.333 7.09 6.63 46.86 2.15
88 89 9.420551 GTGGTTATAGGTAACAATAGCTATGAC 57.579 37.037 7.09 15.77 46.86 3.06
95 96 8.770010 AGGTAACAATAGCTATGACTCTACTT 57.230 34.615 7.09 0.00 38.07 2.24
96 97 9.203163 AGGTAACAATAGCTATGACTCTACTTT 57.797 33.333 7.09 0.00 38.07 2.66
106 107 9.196139 AGCTATGACTCTACTTTAAGAATGACT 57.804 33.333 0.00 0.00 0.00 3.41
107 108 9.810545 GCTATGACTCTACTTTAAGAATGACTT 57.189 33.333 0.00 0.00 42.04 3.01
111 112 8.750298 TGACTCTACTTTAAGAATGACTTAGGG 58.250 37.037 0.00 0.00 41.33 3.53
112 113 8.667592 ACTCTACTTTAAGAATGACTTAGGGT 57.332 34.615 0.00 0.00 41.33 4.34
113 114 9.102453 ACTCTACTTTAAGAATGACTTAGGGTT 57.898 33.333 0.00 0.00 41.33 4.11
114 115 9.589111 CTCTACTTTAAGAATGACTTAGGGTTC 57.411 37.037 0.00 0.00 41.33 3.62
115 116 8.537858 TCTACTTTAAGAATGACTTAGGGTTCC 58.462 37.037 0.00 0.00 41.33 3.62
116 117 6.482524 ACTTTAAGAATGACTTAGGGTTCCC 58.517 40.000 0.00 0.00 41.33 3.97
117 118 5.446260 TTAAGAATGACTTAGGGTTCCCC 57.554 43.478 4.02 0.00 41.33 4.81
118 119 3.453353 TAAGAATGACTTAGGGTTCCCCG 59.547 47.826 4.02 0.00 43.14 5.73
119 120 4.818720 TAAGAATGACTTAGGGTTCCCCGA 60.819 45.833 4.02 0.00 43.14 5.14
120 121 6.856149 TAAGAATGACTTAGGGTTCCCCGAC 61.856 48.000 4.02 0.00 43.14 4.79
127 128 4.629523 GGTTCCCCGACCGTTGCA 62.630 66.667 0.00 0.00 0.00 4.08
128 129 3.047877 GTTCCCCGACCGTTGCAG 61.048 66.667 0.00 0.00 0.00 4.41
134 135 4.680237 CGACCGTTGCAGCTCCCA 62.680 66.667 0.00 0.00 0.00 4.37
135 136 3.050275 GACCGTTGCAGCTCCCAC 61.050 66.667 0.00 0.00 0.00 4.61
136 137 4.988598 ACCGTTGCAGCTCCCACG 62.989 66.667 0.00 0.00 0.00 4.94
137 138 4.680237 CCGTTGCAGCTCCCACGA 62.680 66.667 2.26 0.00 0.00 4.35
138 139 3.414700 CGTTGCAGCTCCCACGAC 61.415 66.667 0.00 0.00 0.00 4.34
139 140 3.414700 GTTGCAGCTCCCACGACG 61.415 66.667 0.00 0.00 0.00 5.12
140 141 3.923864 TTGCAGCTCCCACGACGT 61.924 61.111 0.00 0.00 0.00 4.34
141 142 3.858868 TTGCAGCTCCCACGACGTC 62.859 63.158 5.18 5.18 0.00 4.34
143 144 4.436998 CAGCTCCCACGACGTCCC 62.437 72.222 10.58 0.00 0.00 4.46
144 145 4.680537 AGCTCCCACGACGTCCCT 62.681 66.667 10.58 0.00 0.00 4.20
145 146 4.131088 GCTCCCACGACGTCCCTC 62.131 72.222 10.58 0.00 0.00 4.30
146 147 2.361357 CTCCCACGACGTCCCTCT 60.361 66.667 10.58 0.00 0.00 3.69
147 148 1.077930 CTCCCACGACGTCCCTCTA 60.078 63.158 10.58 0.00 0.00 2.43
148 149 1.375098 CTCCCACGACGTCCCTCTAC 61.375 65.000 10.58 0.00 0.00 2.59
149 150 2.413142 CCCACGACGTCCCTCTACC 61.413 68.421 10.58 0.00 0.00 3.18
150 151 1.378250 CCACGACGTCCCTCTACCT 60.378 63.158 10.58 0.00 0.00 3.08
151 152 0.964358 CCACGACGTCCCTCTACCTT 60.964 60.000 10.58 0.00 0.00 3.50
152 153 0.450983 CACGACGTCCCTCTACCTTC 59.549 60.000 10.58 0.00 0.00 3.46
153 154 0.679321 ACGACGTCCCTCTACCTTCC 60.679 60.000 10.58 0.00 0.00 3.46
154 155 0.394080 CGACGTCCCTCTACCTTCCT 60.394 60.000 10.58 0.00 0.00 3.36
155 156 1.849977 GACGTCCCTCTACCTTCCTT 58.150 55.000 3.51 0.00 0.00 3.36
156 157 1.477295 GACGTCCCTCTACCTTCCTTG 59.523 57.143 3.51 0.00 0.00 3.61
157 158 1.203149 ACGTCCCTCTACCTTCCTTGT 60.203 52.381 0.00 0.00 0.00 3.16
158 159 1.900486 CGTCCCTCTACCTTCCTTGTT 59.100 52.381 0.00 0.00 0.00 2.83
159 160 2.094130 CGTCCCTCTACCTTCCTTGTTC 60.094 54.545 0.00 0.00 0.00 3.18
160 161 2.094130 GTCCCTCTACCTTCCTTGTTCG 60.094 54.545 0.00 0.00 0.00 3.95
161 162 2.176889 CCCTCTACCTTCCTTGTTCGA 58.823 52.381 0.00 0.00 0.00 3.71
162 163 2.166664 CCCTCTACCTTCCTTGTTCGAG 59.833 54.545 0.00 0.00 0.00 4.04
163 164 2.826725 CCTCTACCTTCCTTGTTCGAGT 59.173 50.000 0.00 0.00 0.00 4.18
164 165 3.367498 CCTCTACCTTCCTTGTTCGAGTG 60.367 52.174 0.00 0.00 0.00 3.51
165 166 3.493334 TCTACCTTCCTTGTTCGAGTGA 58.507 45.455 0.00 0.00 0.00 3.41
166 167 4.087182 TCTACCTTCCTTGTTCGAGTGAT 58.913 43.478 0.00 0.00 0.00 3.06
167 168 3.045601 ACCTTCCTTGTTCGAGTGATG 57.954 47.619 0.00 0.00 0.00 3.07
168 169 2.289694 ACCTTCCTTGTTCGAGTGATGG 60.290 50.000 0.00 0.00 0.00 3.51
169 170 2.289694 CCTTCCTTGTTCGAGTGATGGT 60.290 50.000 0.00 0.00 0.00 3.55
170 171 2.455674 TCCTTGTTCGAGTGATGGTG 57.544 50.000 0.00 0.00 0.00 4.17
171 172 1.001974 TCCTTGTTCGAGTGATGGTGG 59.998 52.381 0.00 0.00 0.00 4.61
172 173 1.270839 CCTTGTTCGAGTGATGGTGGT 60.271 52.381 0.00 0.00 0.00 4.16
173 174 2.069273 CTTGTTCGAGTGATGGTGGTC 58.931 52.381 0.00 0.00 0.00 4.02
174 175 1.044611 TGTTCGAGTGATGGTGGTCA 58.955 50.000 0.00 0.00 0.00 4.02
175 176 1.623311 TGTTCGAGTGATGGTGGTCAT 59.377 47.619 0.00 0.00 39.13 3.06
176 177 2.002586 GTTCGAGTGATGGTGGTCATG 58.997 52.381 0.00 0.00 35.97 3.07
177 178 0.536724 TCGAGTGATGGTGGTCATGG 59.463 55.000 0.00 0.00 35.97 3.66
178 179 1.091771 CGAGTGATGGTGGTCATGGC 61.092 60.000 0.00 0.00 35.97 4.40
179 180 1.078214 AGTGATGGTGGTCATGGCG 60.078 57.895 0.00 0.00 35.97 5.69
180 181 1.078497 GTGATGGTGGTCATGGCGA 60.078 57.895 0.00 0.00 35.97 5.54
181 182 1.078497 TGATGGTGGTCATGGCGAC 60.078 57.895 3.54 3.54 44.57 5.19
182 183 1.221840 GATGGTGGTCATGGCGACT 59.778 57.895 12.38 0.00 44.70 4.18
183 184 1.078214 ATGGTGGTCATGGCGACTG 60.078 57.895 12.38 0.00 44.70 3.51
184 185 1.552799 ATGGTGGTCATGGCGACTGA 61.553 55.000 12.38 0.06 44.70 3.41
185 186 1.448540 GGTGGTCATGGCGACTGAG 60.449 63.158 12.38 0.00 44.70 3.35
186 187 2.103042 GTGGTCATGGCGACTGAGC 61.103 63.158 5.07 11.48 44.70 4.26
187 188 2.265739 GGTCATGGCGACTGAGCA 59.734 61.111 12.96 0.00 44.70 4.26
188 189 1.812922 GGTCATGGCGACTGAGCAG 60.813 63.158 12.96 0.00 44.70 4.24
189 190 1.079543 GTCATGGCGACTGAGCAGT 60.080 57.895 2.20 2.20 45.84 4.40
190 191 1.079612 TCATGGCGACTGAGCAGTG 60.080 57.895 8.03 2.25 42.66 3.66
191 192 2.104859 CATGGCGACTGAGCAGTGG 61.105 63.158 8.03 8.06 42.66 4.00
192 193 2.587247 ATGGCGACTGAGCAGTGGT 61.587 57.895 8.03 0.00 42.66 4.16
193 194 2.031163 GGCGACTGAGCAGTGGTT 59.969 61.111 8.03 0.00 42.66 3.67
194 195 2.320587 GGCGACTGAGCAGTGGTTG 61.321 63.158 8.03 0.00 42.66 3.77
195 196 1.300931 GCGACTGAGCAGTGGTTGA 60.301 57.895 8.03 0.00 42.66 3.18
196 197 0.880278 GCGACTGAGCAGTGGTTGAA 60.880 55.000 8.03 0.00 42.66 2.69
197 198 1.143305 CGACTGAGCAGTGGTTGAAG 58.857 55.000 8.03 0.00 42.66 3.02
198 199 1.269778 CGACTGAGCAGTGGTTGAAGA 60.270 52.381 8.03 0.00 42.66 2.87
199 200 2.411904 GACTGAGCAGTGGTTGAAGAG 58.588 52.381 8.03 0.00 42.66 2.85
200 201 1.765314 ACTGAGCAGTGGTTGAAGAGT 59.235 47.619 1.71 0.00 40.75 3.24
201 202 2.141517 CTGAGCAGTGGTTGAAGAGTG 58.858 52.381 0.00 0.00 0.00 3.51
202 203 1.762370 TGAGCAGTGGTTGAAGAGTGA 59.238 47.619 0.00 0.00 0.00 3.41
203 204 2.139118 GAGCAGTGGTTGAAGAGTGAC 58.861 52.381 0.00 0.00 0.00 3.67
204 205 0.861837 GCAGTGGTTGAAGAGTGACG 59.138 55.000 0.00 0.00 0.00 4.35
205 206 1.806623 GCAGTGGTTGAAGAGTGACGT 60.807 52.381 0.00 0.00 0.00 4.34
206 207 2.128035 CAGTGGTTGAAGAGTGACGTC 58.872 52.381 9.11 9.11 0.00 4.34
207 208 1.129326 GTGGTTGAAGAGTGACGTCG 58.871 55.000 11.62 0.00 0.00 5.12
208 209 1.026584 TGGTTGAAGAGTGACGTCGA 58.973 50.000 11.62 0.00 0.00 4.20
209 210 1.001706 TGGTTGAAGAGTGACGTCGAG 60.002 52.381 11.62 0.00 0.00 4.04
210 211 1.666311 GGTTGAAGAGTGACGTCGAGG 60.666 57.143 11.62 3.03 0.00 4.63
211 212 1.001597 GTTGAAGAGTGACGTCGAGGT 60.002 52.381 11.12 11.12 0.00 3.85
212 213 0.591659 TGAAGAGTGACGTCGAGGTG 59.408 55.000 16.63 0.00 0.00 4.00
213 214 0.592148 GAAGAGTGACGTCGAGGTGT 59.408 55.000 16.63 0.00 0.00 4.16
214 215 0.592148 AAGAGTGACGTCGAGGTGTC 59.408 55.000 16.63 10.29 35.67 3.67
215 216 1.209640 GAGTGACGTCGAGGTGTCC 59.790 63.158 16.63 1.83 34.18 4.02
216 217 1.512996 GAGTGACGTCGAGGTGTCCA 61.513 60.000 16.63 4.72 34.18 4.02
217 218 1.105167 AGTGACGTCGAGGTGTCCAA 61.105 55.000 16.63 0.00 34.18 3.53
218 219 0.663568 GTGACGTCGAGGTGTCCAAG 60.664 60.000 16.63 0.00 34.18 3.61
219 220 1.105167 TGACGTCGAGGTGTCCAAGT 61.105 55.000 16.63 0.00 34.18 3.16
220 221 0.663568 GACGTCGAGGTGTCCAAGTG 60.664 60.000 16.63 0.00 0.00 3.16
221 222 1.372997 CGTCGAGGTGTCCAAGTGG 60.373 63.158 0.00 0.00 0.00 4.00
222 223 1.802337 CGTCGAGGTGTCCAAGTGGA 61.802 60.000 0.00 0.00 43.08 4.02
230 231 4.288234 TCCAAGTGGACGTCCTGT 57.712 55.556 33.39 18.78 39.78 4.00
231 232 2.523440 TCCAAGTGGACGTCCTGTT 58.477 52.632 33.39 23.17 39.78 3.16
232 233 1.707106 TCCAAGTGGACGTCCTGTTA 58.293 50.000 33.39 12.38 39.78 2.41
233 234 2.253610 TCCAAGTGGACGTCCTGTTAT 58.746 47.619 33.39 13.69 39.78 1.89
234 235 3.433343 TCCAAGTGGACGTCCTGTTATA 58.567 45.455 33.39 11.17 39.78 0.98
235 236 3.194116 TCCAAGTGGACGTCCTGTTATAC 59.806 47.826 33.39 22.07 39.78 1.47
236 237 3.176708 CAAGTGGACGTCCTGTTATACG 58.823 50.000 33.39 11.94 44.47 3.06
237 238 1.133790 AGTGGACGTCCTGTTATACGC 59.866 52.381 33.39 12.34 42.74 4.42
238 239 1.135315 GTGGACGTCCTGTTATACGCA 60.135 52.381 33.39 8.02 42.74 5.24
239 240 1.752498 TGGACGTCCTGTTATACGCAT 59.248 47.619 33.39 0.00 42.74 4.73
240 241 2.223641 TGGACGTCCTGTTATACGCATC 60.224 50.000 33.39 3.99 42.74 3.91
241 242 2.034305 GGACGTCCTGTTATACGCATCT 59.966 50.000 27.64 0.00 42.74 2.90
242 243 3.043586 GACGTCCTGTTATACGCATCTG 58.956 50.000 3.51 0.00 42.74 2.90
243 244 2.686405 ACGTCCTGTTATACGCATCTGA 59.314 45.455 0.00 0.00 42.74 3.27
244 245 3.129813 ACGTCCTGTTATACGCATCTGAA 59.870 43.478 0.00 0.00 42.74 3.02
245 246 4.202121 ACGTCCTGTTATACGCATCTGAAT 60.202 41.667 0.00 0.00 42.74 2.57
246 247 4.148871 CGTCCTGTTATACGCATCTGAATG 59.851 45.833 0.00 0.00 35.87 2.67
256 257 1.730501 CATCTGAATGCGAGTGTGGT 58.269 50.000 0.00 0.00 0.00 4.16
257 258 1.662629 CATCTGAATGCGAGTGTGGTC 59.337 52.381 0.00 0.00 0.00 4.02
258 259 0.037326 TCTGAATGCGAGTGTGGTCC 60.037 55.000 0.00 0.00 0.00 4.46
259 260 0.036952 CTGAATGCGAGTGTGGTCCT 60.037 55.000 0.00 0.00 0.00 3.85
260 261 1.204704 CTGAATGCGAGTGTGGTCCTA 59.795 52.381 0.00 0.00 0.00 2.94
261 262 1.621317 TGAATGCGAGTGTGGTCCTAA 59.379 47.619 0.00 0.00 0.00 2.69
262 263 2.271800 GAATGCGAGTGTGGTCCTAAG 58.728 52.381 0.00 0.00 0.00 2.18
263 264 1.557099 ATGCGAGTGTGGTCCTAAGA 58.443 50.000 0.00 0.00 0.00 2.10
264 265 0.601558 TGCGAGTGTGGTCCTAAGAC 59.398 55.000 0.00 0.00 42.73 3.01
277 278 4.962155 GTCCTAAGACCTACCAATGATGG 58.038 47.826 0.00 0.00 43.99 3.51
285 286 4.360643 CCAATGATGGTGTGGGGG 57.639 61.111 0.00 0.00 42.18 5.40
286 287 2.059786 CCAATGATGGTGTGGGGGC 61.060 63.158 0.00 0.00 42.18 5.80
287 288 1.000739 CAATGATGGTGTGGGGGCT 59.999 57.895 0.00 0.00 0.00 5.19
288 289 1.039233 CAATGATGGTGTGGGGGCTC 61.039 60.000 0.00 0.00 0.00 4.70
289 290 1.217057 AATGATGGTGTGGGGGCTCT 61.217 55.000 0.00 0.00 0.00 4.09
290 291 0.327480 ATGATGGTGTGGGGGCTCTA 60.327 55.000 0.00 0.00 0.00 2.43
291 292 0.982852 TGATGGTGTGGGGGCTCTAG 60.983 60.000 0.00 0.00 0.00 2.43
292 293 1.694169 ATGGTGTGGGGGCTCTAGG 60.694 63.158 0.00 0.00 0.00 3.02
293 294 2.285442 GGTGTGGGGGCTCTAGGT 60.285 66.667 0.00 0.00 0.00 3.08
294 295 2.670148 GGTGTGGGGGCTCTAGGTG 61.670 68.421 0.00 0.00 0.00 4.00
295 296 2.285368 TGTGGGGGCTCTAGGTGG 60.285 66.667 0.00 0.00 0.00 4.61
296 297 2.040606 GTGGGGGCTCTAGGTGGA 59.959 66.667 0.00 0.00 0.00 4.02
297 298 2.040606 TGGGGGCTCTAGGTGGAC 59.959 66.667 0.00 0.00 0.00 4.02
298 299 2.768769 GGGGGCTCTAGGTGGACC 60.769 72.222 0.00 0.00 0.00 4.46
299 300 2.768769 GGGGCTCTAGGTGGACCC 60.769 72.222 6.47 6.47 40.05 4.46
300 301 2.768769 GGGCTCTAGGTGGACCCC 60.769 72.222 0.00 0.00 36.42 4.95
301 302 2.040606 GGCTCTAGGTGGACCCCA 59.959 66.667 2.29 0.00 36.42 4.96
302 303 2.066999 GGCTCTAGGTGGACCCCAG 61.067 68.421 2.29 0.00 32.34 4.45
303 304 1.001760 GCTCTAGGTGGACCCCAGA 59.998 63.158 2.29 0.00 32.34 3.86
304 305 0.399233 GCTCTAGGTGGACCCCAGAT 60.399 60.000 2.29 0.00 32.34 2.90
305 306 1.418334 CTCTAGGTGGACCCCAGATG 58.582 60.000 2.29 0.00 32.34 2.90
306 307 1.015609 TCTAGGTGGACCCCAGATGA 58.984 55.000 2.29 0.00 32.34 2.92
307 308 1.123928 CTAGGTGGACCCCAGATGAC 58.876 60.000 2.29 0.00 32.34 3.06
308 309 0.415830 TAGGTGGACCCCAGATGACA 59.584 55.000 2.29 0.00 32.34 3.58
309 310 0.911525 AGGTGGACCCCAGATGACAG 60.912 60.000 2.29 0.00 32.34 3.51
310 311 1.604378 GTGGACCCCAGATGACAGG 59.396 63.158 0.00 0.00 32.34 4.00
311 312 1.160870 TGGACCCCAGATGACAGGT 59.839 57.895 0.00 0.00 34.57 4.00
312 313 0.909610 TGGACCCCAGATGACAGGTC 60.910 60.000 2.85 2.85 46.65 3.85
313 314 1.908483 GACCCCAGATGACAGGTCC 59.092 63.158 0.00 0.00 42.49 4.46
314 315 0.618968 GACCCCAGATGACAGGTCCT 60.619 60.000 0.00 0.00 42.49 3.85
315 316 0.178861 ACCCCAGATGACAGGTCCTT 60.179 55.000 0.00 0.00 0.00 3.36
316 317 1.080498 ACCCCAGATGACAGGTCCTTA 59.920 52.381 0.00 0.00 0.00 2.69
317 318 2.196595 CCCCAGATGACAGGTCCTTAA 58.803 52.381 0.00 0.00 0.00 1.85
318 319 2.092914 CCCCAGATGACAGGTCCTTAAC 60.093 54.545 0.00 0.00 0.00 2.01
330 331 3.717576 GGTCCTTAACCCTACCTGTAGT 58.282 50.000 3.80 0.00 42.85 2.73
331 332 4.871822 GGTCCTTAACCCTACCTGTAGTA 58.128 47.826 3.80 0.00 42.85 1.82
332 333 4.892345 GGTCCTTAACCCTACCTGTAGTAG 59.108 50.000 3.80 0.00 46.99 2.57
344 345 3.632333 CCTGTAGTAGGTGACCTCATCA 58.368 50.000 7.77 3.00 42.00 3.07
355 356 4.916041 TGACCTCATCACCATCTTCTTT 57.084 40.909 0.00 0.00 29.99 2.52
357 358 5.734720 TGACCTCATCACCATCTTCTTTAC 58.265 41.667 0.00 0.00 29.99 2.01
381 382 0.672401 CAACGATACGTGCACCCCTT 60.672 55.000 12.15 0.00 39.99 3.95
393 394 1.081092 ACCCCTTGCTCTCTGGCTA 59.919 57.895 0.00 0.00 0.00 3.93
398 399 2.303549 CTTGCTCTCTGGCTACCCCG 62.304 65.000 0.00 0.00 35.87 5.73
399 400 2.442272 GCTCTCTGGCTACCCCGA 60.442 66.667 0.00 0.00 35.87 5.14
403 404 2.682494 TCTGGCTACCCCGACCAC 60.682 66.667 0.00 0.00 35.87 4.16
414 415 3.414700 CGACCACAGGCTCAACGC 61.415 66.667 0.00 0.00 38.13 4.84
419 420 1.595109 CACAGGCTCAACGCTGTCA 60.595 57.895 0.00 0.00 39.13 3.58
424 425 1.958205 GCTCAACGCTGTCAGCACT 60.958 57.895 24.13 7.70 42.58 4.40
450 451 3.444805 GCGACGCTCAGGAGGAGT 61.445 66.667 13.73 0.00 45.88 3.85
451 452 2.113433 GCGACGCTCAGGAGGAGTA 61.113 63.158 13.73 0.00 45.88 2.59
453 454 1.731093 GACGCTCAGGAGGAGTAGC 59.269 63.158 0.00 0.00 45.88 3.58
454 455 0.750182 GACGCTCAGGAGGAGTAGCT 60.750 60.000 0.00 0.00 45.88 3.32
455 456 1.034838 ACGCTCAGGAGGAGTAGCTG 61.035 60.000 0.00 0.00 45.88 4.24
456 457 1.441311 GCTCAGGAGGAGTAGCTGC 59.559 63.158 0.00 0.00 45.88 5.25
457 458 1.042559 GCTCAGGAGGAGTAGCTGCT 61.043 60.000 3.08 3.08 45.88 4.24
458 459 1.752436 GCTCAGGAGGAGTAGCTGCTA 60.752 57.143 3.57 5.02 45.88 3.49
459 460 2.660572 CTCAGGAGGAGTAGCTGCTAA 58.339 52.381 11.57 0.00 38.90 3.09
465 466 0.815734 GGAGTAGCTGCTAACGGTGA 59.184 55.000 11.57 0.00 0.00 4.02
512 513 0.033109 CATTGGGGAAGGAAGGGACC 60.033 60.000 0.00 0.00 0.00 4.46
522 523 1.220749 GAAGGGACCGCATAGTGCA 59.779 57.895 2.63 0.00 45.36 4.57
553 564 0.615850 GTAGCTTCAGACCCTTGCCT 59.384 55.000 0.00 0.00 0.00 4.75
601 612 1.077357 GAGCTCCTCCTCGTCTGGA 60.077 63.158 0.87 0.00 34.52 3.86
608 619 2.752238 CCTCGTCTGGAGCGGACT 60.752 66.667 0.00 0.00 41.71 3.85
645 657 0.995024 ACCAGCTTAGCCCAGTCATT 59.005 50.000 0.00 0.00 0.00 2.57
675 687 1.067565 GCGATATCGGATCTGCTTCCA 60.068 52.381 25.51 0.00 40.23 3.53
689 701 0.250234 CTTCCAGCCATGACGGAGAA 59.750 55.000 0.00 0.00 36.56 2.87
702 714 1.036707 CGGAGAAGGTGGGAGAGATC 58.963 60.000 0.00 0.00 0.00 2.75
723 735 2.491825 CGGGGAGAGGAAGGTATGAGAT 60.492 54.545 0.00 0.00 0.00 2.75
780 793 2.732016 GGGTTTGGGCCACGTTTC 59.268 61.111 5.23 0.00 0.00 2.78
861 887 2.183300 GCTACGGGTGCGTGATCA 59.817 61.111 0.00 0.00 0.00 2.92
869 895 1.151668 GGTGCGTGATCATAGATGCC 58.848 55.000 0.00 0.00 0.00 4.40
920 946 4.022603 ACACACCCATGCATGCTTAAATA 58.977 39.130 21.69 0.00 0.00 1.40
932 958 6.127758 TGCATGCTTAAATAATTTCCTGACGT 60.128 34.615 20.33 0.00 0.00 4.34
999 1104 4.573201 ACAACTAACGAAAGCAGCTTACAA 59.427 37.500 8.45 0.00 0.00 2.41
1083 1211 2.884685 CTCTGCTCCTGCGCTTCG 60.885 66.667 9.73 0.00 43.34 3.79
1122 1267 4.899239 CTCCCGCCATCGCTCCAC 62.899 72.222 0.00 0.00 0.00 4.02
1188 1337 1.380650 GGAGGAAGCGGAGAGAGGT 60.381 63.158 0.00 0.00 0.00 3.85
1293 1442 1.153549 GCGCGTCAAGATCCTCCTT 60.154 57.895 8.43 0.00 0.00 3.36
1373 1522 1.751924 ACTACGTTCTCAGAGGATGGC 59.248 52.381 2.77 0.00 0.00 4.40
1537 2359 1.388174 AGGAAGAGGTCTCTGGGAGA 58.612 55.000 0.77 0.00 40.36 3.71
1653 2901 8.024865 GGTTATTGTTTAACCCACATGTAGTTC 58.975 37.037 14.78 4.58 40.71 3.01
1718 2966 2.851821 TGGGTCTGGATTGATTGGATCA 59.148 45.455 0.00 0.00 37.55 2.92
1723 2971 5.595542 GGTCTGGATTGATTGGATCATTTCA 59.404 40.000 0.00 0.00 39.39 2.69
1736 2984 5.698089 TGGATCATTTCAGACAATCTATCGC 59.302 40.000 0.00 0.00 0.00 4.58
1876 3127 7.020602 CCAAGAAAACACAATTTTGACAAACC 58.979 34.615 0.00 0.00 0.00 3.27
1967 3218 6.000840 TGTTGAAAAAGGAAAACCTTTGCTT 58.999 32.000 13.78 6.68 39.58 3.91
1981 3232 3.698040 CCTTTGCTTCATAGTGCTCCAAT 59.302 43.478 0.00 0.00 0.00 3.16
1986 3237 3.491267 GCTTCATAGTGCTCCAATACGTC 59.509 47.826 0.00 0.00 0.00 4.34
2118 3370 9.950680 GTACTTTGAGAAATTGTTGATCAGAAA 57.049 29.630 0.00 0.00 0.00 2.52
2196 3451 7.453393 TGTTCCAGTGAGAAACTCTAATGAAT 58.547 34.615 0.00 0.00 36.83 2.57
2197 3452 7.939039 TGTTCCAGTGAGAAACTCTAATGAATT 59.061 33.333 0.00 0.00 36.83 2.17
2261 3531 7.718272 TGTGACAATTACAAGGTTGTACTAC 57.282 36.000 1.96 0.00 42.84 2.73
2353 3625 0.602638 TCAGCAACGCTCGGATTTGT 60.603 50.000 0.00 0.00 36.40 2.83
2407 4437 6.972328 CCAACGGTCCATATTCAAACTTATTG 59.028 38.462 0.00 0.00 0.00 1.90
2543 4585 3.994204 TTTCTTTTCGTAAGGGGCAAC 57.006 42.857 0.00 0.00 38.47 4.17
3001 5075 8.752005 ATTAATAATCAGCTGCAGGTTAAAGA 57.248 30.769 17.45 11.00 0.00 2.52
3025 5099 4.141711 TGCAGTGAACCTCAGTTTAAGAGT 60.142 41.667 0.00 0.00 35.94 3.24
3239 5322 4.559862 AACTGACTTATTGGTCTCCAGG 57.440 45.455 0.00 0.00 37.16 4.45
3316 5399 5.010933 AGAAGATGAAGACTCGTGTTCCTA 58.989 41.667 4.74 0.00 40.24 2.94
3412 5495 4.141801 CGTATCCCCTTGATGTTGTTAGGA 60.142 45.833 0.00 0.00 34.76 2.94
3524 5608 0.955428 GCGCTCTCATTGTCCAACCA 60.955 55.000 0.00 0.00 0.00 3.67
3525 5609 1.522668 CGCTCTCATTGTCCAACCAA 58.477 50.000 0.00 0.00 0.00 3.67
3531 5615 3.882888 TCTCATTGTCCAACCAAGTGAAC 59.117 43.478 0.00 0.00 0.00 3.18
3532 5616 3.625853 TCATTGTCCAACCAAGTGAACA 58.374 40.909 0.00 0.00 0.00 3.18
3685 7512 4.038271 TGCTCTTTCCTGATGACCAATT 57.962 40.909 0.00 0.00 0.00 2.32
3686 7513 4.012374 TGCTCTTTCCTGATGACCAATTC 58.988 43.478 0.00 0.00 0.00 2.17
3742 7580 9.864034 CCATTTGTCGTCAATGATACTTATTAC 57.136 33.333 0.00 0.00 33.32 1.89
3876 7765 2.750814 TGCTCCCTCTATGTGATCACA 58.249 47.619 29.67 29.67 46.44 3.58
3893 7782 9.261180 TGTGATCACACTTTAAGAAGTTCTAAG 57.739 33.333 24.56 9.61 43.48 2.18
3933 7861 7.066163 TGTCATGCTTAACAACTATTGATGGAG 59.934 37.037 0.00 0.00 0.00 3.86
3945 7873 3.520290 TTGATGGAGGTAGTTACGCAG 57.480 47.619 0.00 0.00 0.00 5.18
3959 7887 5.611374 AGTTACGCAGATTGCATAGGTAAT 58.389 37.500 1.69 0.00 45.36 1.89
3985 7913 7.012044 TGTGCTTCTTCTTTTAGGTACAGTTTC 59.988 37.037 0.00 0.00 0.00 2.78
4041 7972 3.502356 TCCATTTTTACAGGTTGTCCCC 58.498 45.455 0.00 0.00 0.00 4.81
4131 8074 4.833478 AGCACCTGTGTTATCAGAAGAT 57.167 40.909 0.00 0.00 37.61 2.40
4141 8084 8.078060 TGTGTTATCAGAAGATGGAAGTGATA 57.922 34.615 0.00 0.00 35.67 2.15
4283 8253 5.411669 CCCCACAATTCTTACACTTGTCTAC 59.588 44.000 0.00 0.00 30.99 2.59
4376 8358 7.038658 AGGCTTGTATCAAGAGAAGTAGAAGTT 60.039 37.037 12.77 0.00 0.00 2.66
4497 8487 7.078228 GGAAATTCACATTGTATAGATTCGGC 58.922 38.462 0.00 0.00 0.00 5.54
4555 8545 3.060895 GTGCAGAGACGTGCTATACAAAC 59.939 47.826 0.00 0.00 44.32 2.93
4651 8648 4.080356 CCACTAGGGATGAAAATGGAGTGA 60.080 45.833 0.00 0.00 40.01 3.41
4662 8659 9.264719 GATGAAAATGGAGTGAAAAATTTCTGT 57.735 29.630 7.36 0.00 38.02 3.41
4663 8660 9.617523 ATGAAAATGGAGTGAAAAATTTCTGTT 57.382 25.926 7.36 0.00 38.02 3.16
4664 8661 9.447157 TGAAAATGGAGTGAAAAATTTCTGTTT 57.553 25.926 7.36 0.00 38.02 2.83
4708 8705 5.796350 ACGAAGAGGAAATATGAAAACGG 57.204 39.130 0.00 0.00 0.00 4.44
4741 8738 4.005487 TGCAAAATGGAAGTGGAAATGG 57.995 40.909 0.00 0.00 0.00 3.16
4804 8803 1.876416 CGGTGGAACAGACGTGGAAAT 60.876 52.381 0.00 0.00 41.80 2.17
4813 8812 5.576447 ACAGACGTGGAAATGAAACTTTT 57.424 34.783 0.00 0.00 0.00 2.27
4819 8818 5.865013 ACGTGGAAATGAAACTTTTCGTTTT 59.135 32.000 18.47 10.98 45.48 2.43
4820 8819 6.175087 CGTGGAAATGAAACTTTTCGTTTTG 58.825 36.000 18.47 9.07 45.48 2.44
4831 8830 6.267496 ACTTTTCGTTTTGGAGAATATGGG 57.733 37.500 0.00 0.00 0.00 4.00
4859 8858 7.581213 TCTGTTTTTAATACAGGCATATGGG 57.419 36.000 13.83 0.00 42.53 4.00
4908 8907 5.826208 ACACATGATGACACAATGAGCATAT 59.174 36.000 0.00 0.00 0.00 1.78
4909 8908 6.993902 ACACATGATGACACAATGAGCATATA 59.006 34.615 0.00 0.00 0.00 0.86
4910 8909 7.664318 ACACATGATGACACAATGAGCATATAT 59.336 33.333 0.00 0.00 0.00 0.86
4911 8910 9.158233 CACATGATGACACAATGAGCATATATA 57.842 33.333 0.00 0.00 0.00 0.86
4972 8971 5.819379 TGTACTCAACTAGACCCTATACACG 59.181 44.000 0.00 0.00 0.00 4.49
4995 8994 9.692749 CACGATTGTCCAGTACTATTACAATAT 57.307 33.333 20.80 13.71 40.02 1.28
5053 9052 8.354711 TGTAGCCATGTTACCAATTCATTAAA 57.645 30.769 0.00 0.00 0.00 1.52
5078 9077 8.825667 ATTTGTTTGTTTTTGTGTGTACTCTT 57.174 26.923 0.00 0.00 0.00 2.85
5079 9078 8.649973 TTTGTTTGTTTTTGTGTGTACTCTTT 57.350 26.923 0.00 0.00 0.00 2.52
5080 9079 7.630470 TGTTTGTTTTTGTGTGTACTCTTTG 57.370 32.000 0.00 0.00 0.00 2.77
5081 9080 7.203910 TGTTTGTTTTTGTGTGTACTCTTTGT 58.796 30.769 0.00 0.00 0.00 2.83
5082 9081 7.168302 TGTTTGTTTTTGTGTGTACTCTTTGTG 59.832 33.333 0.00 0.00 0.00 3.33
5083 9082 6.320494 TGTTTTTGTGTGTACTCTTTGTGT 57.680 33.333 0.00 0.00 0.00 3.72
5084 9083 6.375377 TGTTTTTGTGTGTACTCTTTGTGTC 58.625 36.000 0.00 0.00 0.00 3.67
5085 9084 5.554822 TTTTGTGTGTACTCTTTGTGTCC 57.445 39.130 0.00 0.00 0.00 4.02
5086 9085 2.816689 TGTGTGTACTCTTTGTGTCCG 58.183 47.619 0.00 0.00 0.00 4.79
5087 9086 2.166870 TGTGTGTACTCTTTGTGTCCGT 59.833 45.455 0.00 0.00 0.00 4.69
5088 9087 3.192466 GTGTGTACTCTTTGTGTCCGTT 58.808 45.455 0.00 0.00 0.00 4.44
5089 9088 3.244579 GTGTGTACTCTTTGTGTCCGTTC 59.755 47.826 0.00 0.00 0.00 3.95
5090 9089 3.131577 TGTGTACTCTTTGTGTCCGTTCT 59.868 43.478 0.00 0.00 0.00 3.01
5091 9090 3.489785 GTGTACTCTTTGTGTCCGTTCTG 59.510 47.826 0.00 0.00 0.00 3.02
5092 9091 2.981859 ACTCTTTGTGTCCGTTCTGT 57.018 45.000 0.00 0.00 0.00 3.41
5093 9092 4.338964 TGTACTCTTTGTGTCCGTTCTGTA 59.661 41.667 0.00 0.00 0.00 2.74
5094 9093 4.602340 ACTCTTTGTGTCCGTTCTGTAT 57.398 40.909 0.00 0.00 0.00 2.29
5095 9094 4.957296 ACTCTTTGTGTCCGTTCTGTATT 58.043 39.130 0.00 0.00 0.00 1.89
5096 9095 4.989168 ACTCTTTGTGTCCGTTCTGTATTC 59.011 41.667 0.00 0.00 0.00 1.75
5097 9096 3.985279 TCTTTGTGTCCGTTCTGTATTCG 59.015 43.478 0.00 0.00 0.00 3.34
5098 9097 3.374220 TTGTGTCCGTTCTGTATTCGT 57.626 42.857 0.00 0.00 0.00 3.85
5099 9098 3.374220 TGTGTCCGTTCTGTATTCGTT 57.626 42.857 0.00 0.00 0.00 3.85
5100 9099 3.311106 TGTGTCCGTTCTGTATTCGTTC 58.689 45.455 0.00 0.00 0.00 3.95
5101 9100 2.665052 GTGTCCGTTCTGTATTCGTTCC 59.335 50.000 0.00 0.00 0.00 3.62
5102 9101 1.916000 GTCCGTTCTGTATTCGTTCCG 59.084 52.381 0.00 0.00 0.00 4.30
5103 9102 1.541147 TCCGTTCTGTATTCGTTCCGT 59.459 47.619 0.00 0.00 0.00 4.69
5104 9103 1.652124 CCGTTCTGTATTCGTTCCGTG 59.348 52.381 0.00 0.00 0.00 4.94
5105 9104 2.322161 CGTTCTGTATTCGTTCCGTGT 58.678 47.619 0.00 0.00 0.00 4.49
5106 9105 2.340577 CGTTCTGTATTCGTTCCGTGTC 59.659 50.000 0.00 0.00 0.00 3.67
5107 9106 3.572584 GTTCTGTATTCGTTCCGTGTCT 58.427 45.455 0.00 0.00 0.00 3.41
5108 9107 3.211803 TCTGTATTCGTTCCGTGTCTG 57.788 47.619 0.00 0.00 0.00 3.51
5109 9108 2.555325 TCTGTATTCGTTCCGTGTCTGT 59.445 45.455 0.00 0.00 0.00 3.41
5110 9109 3.005050 TCTGTATTCGTTCCGTGTCTGTT 59.995 43.478 0.00 0.00 0.00 3.16
5111 9110 3.719924 TGTATTCGTTCCGTGTCTGTTT 58.280 40.909 0.00 0.00 0.00 2.83
5112 9111 4.121317 TGTATTCGTTCCGTGTCTGTTTT 58.879 39.130 0.00 0.00 0.00 2.43
5113 9112 4.571580 TGTATTCGTTCCGTGTCTGTTTTT 59.428 37.500 0.00 0.00 0.00 1.94
5114 9113 3.392769 TTCGTTCCGTGTCTGTTTTTG 57.607 42.857 0.00 0.00 0.00 2.44
5115 9114 2.619147 TCGTTCCGTGTCTGTTTTTGA 58.381 42.857 0.00 0.00 0.00 2.69
5116 9115 3.199677 TCGTTCCGTGTCTGTTTTTGAT 58.800 40.909 0.00 0.00 0.00 2.57
5117 9116 3.001838 TCGTTCCGTGTCTGTTTTTGATG 59.998 43.478 0.00 0.00 0.00 3.07
5118 9117 3.628017 GTTCCGTGTCTGTTTTTGATGG 58.372 45.455 0.00 0.00 0.00 3.51
5119 9118 2.925724 TCCGTGTCTGTTTTTGATGGT 58.074 42.857 0.00 0.00 0.00 3.55
5120 9119 4.074627 TCCGTGTCTGTTTTTGATGGTA 57.925 40.909 0.00 0.00 0.00 3.25
5121 9120 4.647611 TCCGTGTCTGTTTTTGATGGTAT 58.352 39.130 0.00 0.00 0.00 2.73
5122 9121 4.693566 TCCGTGTCTGTTTTTGATGGTATC 59.306 41.667 0.00 0.00 0.00 2.24
5123 9122 4.695455 CCGTGTCTGTTTTTGATGGTATCT 59.305 41.667 0.00 0.00 0.00 1.98
5124 9123 5.872617 CCGTGTCTGTTTTTGATGGTATCTA 59.127 40.000 0.00 0.00 0.00 1.98
5125 9124 6.183360 CCGTGTCTGTTTTTGATGGTATCTAC 60.183 42.308 0.00 0.00 0.00 2.59
5126 9125 6.590292 CGTGTCTGTTTTTGATGGTATCTACT 59.410 38.462 0.00 0.00 0.00 2.57
5127 9126 7.117812 CGTGTCTGTTTTTGATGGTATCTACTT 59.882 37.037 0.00 0.00 0.00 2.24
5128 9127 8.784043 GTGTCTGTTTTTGATGGTATCTACTTT 58.216 33.333 0.00 0.00 0.00 2.66
5129 9128 8.999431 TGTCTGTTTTTGATGGTATCTACTTTC 58.001 33.333 0.00 0.00 0.00 2.62
5130 9129 8.999431 GTCTGTTTTTGATGGTATCTACTTTCA 58.001 33.333 0.00 0.00 0.00 2.69
5131 9130 9.739276 TCTGTTTTTGATGGTATCTACTTTCAT 57.261 29.630 0.00 0.00 0.00 2.57
5142 9141 9.489084 TGGTATCTACTTTCATATTCATTTCCG 57.511 33.333 0.00 0.00 0.00 4.30
5143 9142 8.936864 GGTATCTACTTTCATATTCATTTCCGG 58.063 37.037 0.00 0.00 0.00 5.14
5144 9143 7.986085 ATCTACTTTCATATTCATTTCCGGG 57.014 36.000 0.00 0.00 0.00 5.73
5145 9144 6.296026 TCTACTTTCATATTCATTTCCGGGG 58.704 40.000 0.00 0.00 0.00 5.73
5146 9145 4.867086 ACTTTCATATTCATTTCCGGGGT 58.133 39.130 0.00 0.00 0.00 4.95
5147 9146 5.269189 ACTTTCATATTCATTTCCGGGGTT 58.731 37.500 0.00 0.00 0.00 4.11
5148 9147 5.719563 ACTTTCATATTCATTTCCGGGGTTT 59.280 36.000 0.00 0.00 0.00 3.27
5149 9148 5.845391 TTCATATTCATTTCCGGGGTTTC 57.155 39.130 0.00 0.00 0.00 2.78
5150 9149 5.124036 TCATATTCATTTCCGGGGTTTCT 57.876 39.130 0.00 0.00 0.00 2.52
5151 9150 4.887071 TCATATTCATTTCCGGGGTTTCTG 59.113 41.667 0.00 0.00 0.00 3.02
5152 9151 2.668144 TTCATTTCCGGGGTTTCTGT 57.332 45.000 0.00 0.00 0.00 3.41
5153 9152 3.791953 TTCATTTCCGGGGTTTCTGTA 57.208 42.857 0.00 0.00 0.00 2.74
5154 9153 4.310022 TTCATTTCCGGGGTTTCTGTAT 57.690 40.909 0.00 0.00 0.00 2.29
5155 9154 4.310022 TCATTTCCGGGGTTTCTGTATT 57.690 40.909 0.00 0.00 0.00 1.89
5156 9155 4.266714 TCATTTCCGGGGTTTCTGTATTC 58.733 43.478 0.00 0.00 0.00 1.75
5157 9156 2.389962 TTCCGGGGTTTCTGTATTCG 57.610 50.000 0.00 0.00 0.00 3.34
5158 9157 1.269012 TCCGGGGTTTCTGTATTCGT 58.731 50.000 0.00 0.00 0.00 3.85
5159 9158 1.624813 TCCGGGGTTTCTGTATTCGTT 59.375 47.619 0.00 0.00 0.00 3.85
5160 9159 2.038820 TCCGGGGTTTCTGTATTCGTTT 59.961 45.455 0.00 0.00 0.00 3.60
5161 9160 2.417586 CCGGGGTTTCTGTATTCGTTTC 59.582 50.000 0.00 0.00 0.00 2.78
5162 9161 2.417586 CGGGGTTTCTGTATTCGTTTCC 59.582 50.000 0.00 0.00 0.00 3.13
5163 9162 2.417586 GGGGTTTCTGTATTCGTTTCCG 59.582 50.000 0.00 0.00 0.00 4.30
5164 9163 2.159612 GGGTTTCTGTATTCGTTTCCGC 60.160 50.000 0.00 0.00 0.00 5.54
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 8.796601 ACTGCTGTAGTTATGAGCATTAAGTGC 61.797 40.741 0.00 2.73 45.64 4.40
10 11 6.536582 ACTGCTGTAGTTATGAGCATTAAGTG 59.463 38.462 0.00 0.00 41.74 3.16
11 12 6.644347 ACTGCTGTAGTTATGAGCATTAAGT 58.356 36.000 0.00 0.00 41.74 2.24
25 26 5.539048 CTTTACACCTGTAACTGCTGTAGT 58.461 41.667 0.00 0.00 39.92 2.73
26 27 4.389077 GCTTTACACCTGTAACTGCTGTAG 59.611 45.833 0.00 0.00 39.92 2.74
27 28 4.312443 GCTTTACACCTGTAACTGCTGTA 58.688 43.478 0.00 0.00 39.92 2.74
28 29 3.139077 GCTTTACACCTGTAACTGCTGT 58.861 45.455 11.91 0.00 39.92 4.40
29 30 2.157668 CGCTTTACACCTGTAACTGCTG 59.842 50.000 14.93 0.00 39.92 4.41
30 31 2.413837 CGCTTTACACCTGTAACTGCT 58.586 47.619 14.93 0.00 39.92 4.24
31 32 1.136057 GCGCTTTACACCTGTAACTGC 60.136 52.381 0.00 5.22 39.92 4.40
32 33 1.463444 GGCGCTTTACACCTGTAACTG 59.537 52.381 7.64 0.00 39.92 3.16
33 34 1.804601 GGCGCTTTACACCTGTAACT 58.195 50.000 7.64 0.00 39.92 2.24
34 35 0.441145 CGGCGCTTTACACCTGTAAC 59.559 55.000 7.64 0.00 39.92 2.50
35 36 1.293267 GCGGCGCTTTACACCTGTAA 61.293 55.000 26.86 0.00 38.60 2.41
36 37 1.738830 GCGGCGCTTTACACCTGTA 60.739 57.895 26.86 0.00 0.00 2.74
37 38 3.047877 GCGGCGCTTTACACCTGT 61.048 61.111 26.86 0.00 0.00 4.00
38 39 2.612567 TTGCGGCGCTTTACACCTG 61.613 57.895 33.26 0.00 0.00 4.00
39 40 2.281208 TTGCGGCGCTTTACACCT 60.281 55.556 33.26 0.00 0.00 4.00
40 41 1.293267 TAGTTGCGGCGCTTTACACC 61.293 55.000 33.26 11.99 0.00 4.16
41 42 0.179233 GTAGTTGCGGCGCTTTACAC 60.179 55.000 33.26 19.67 0.00 2.90
42 43 0.600518 TGTAGTTGCGGCGCTTTACA 60.601 50.000 33.26 29.35 0.00 2.41
43 44 0.094730 CTGTAGTTGCGGCGCTTTAC 59.905 55.000 33.26 27.42 0.00 2.01
44 45 0.320073 ACTGTAGTTGCGGCGCTTTA 60.320 50.000 33.26 18.54 0.00 1.85
45 46 1.597027 ACTGTAGTTGCGGCGCTTT 60.597 52.632 33.26 19.58 0.00 3.51
46 47 2.030562 ACTGTAGTTGCGGCGCTT 59.969 55.556 33.26 19.94 0.00 4.68
47 48 2.738521 CACTGTAGTTGCGGCGCT 60.739 61.111 33.26 15.80 0.00 5.92
48 49 3.788766 CCACTGTAGTTGCGGCGC 61.789 66.667 27.44 27.44 0.00 6.53
49 50 0.668096 TAACCACTGTAGTTGCGGCG 60.668 55.000 0.51 0.51 0.00 6.46
50 51 1.734163 ATAACCACTGTAGTTGCGGC 58.266 50.000 1.79 0.00 0.00 6.53
51 52 3.118884 ACCTATAACCACTGTAGTTGCGG 60.119 47.826 1.79 2.62 0.00 5.69
52 53 4.119442 ACCTATAACCACTGTAGTTGCG 57.881 45.455 1.79 0.00 0.00 4.85
53 54 6.400568 TGTTACCTATAACCACTGTAGTTGC 58.599 40.000 1.79 0.00 40.12 4.17
56 57 8.419442 GCTATTGTTACCTATAACCACTGTAGT 58.581 37.037 0.00 0.00 40.12 2.73
57 58 8.639761 AGCTATTGTTACCTATAACCACTGTAG 58.360 37.037 0.00 0.00 40.12 2.74
58 59 8.543293 AGCTATTGTTACCTATAACCACTGTA 57.457 34.615 0.00 0.00 40.12 2.74
59 60 7.433537 AGCTATTGTTACCTATAACCACTGT 57.566 36.000 0.00 0.00 40.12 3.55
60 61 9.424319 CATAGCTATTGTTACCTATAACCACTG 57.576 37.037 2.64 0.00 40.12 3.66
61 62 9.375974 TCATAGCTATTGTTACCTATAACCACT 57.624 33.333 2.64 0.00 40.12 4.00
62 63 9.420551 GTCATAGCTATTGTTACCTATAACCAC 57.579 37.037 2.64 0.00 40.12 4.16
63 64 9.375974 AGTCATAGCTATTGTTACCTATAACCA 57.624 33.333 2.64 0.00 40.12 3.67
64 65 9.857957 GAGTCATAGCTATTGTTACCTATAACC 57.142 37.037 2.64 0.00 40.12 2.85
69 70 9.863650 AAGTAGAGTCATAGCTATTGTTACCTA 57.136 33.333 2.64 0.00 0.00 3.08
70 71 8.770010 AAGTAGAGTCATAGCTATTGTTACCT 57.230 34.615 2.64 0.06 0.00 3.08
80 81 9.196139 AGTCATTCTTAAAGTAGAGTCATAGCT 57.804 33.333 0.00 0.00 0.00 3.32
81 82 9.810545 AAGTCATTCTTAAAGTAGAGTCATAGC 57.189 33.333 0.00 0.00 34.23 2.97
85 86 8.750298 CCCTAAGTCATTCTTAAAGTAGAGTCA 58.250 37.037 0.00 0.00 38.05 3.41
86 87 8.751242 ACCCTAAGTCATTCTTAAAGTAGAGTC 58.249 37.037 0.00 0.00 38.05 3.36
87 88 8.667592 ACCCTAAGTCATTCTTAAAGTAGAGT 57.332 34.615 0.00 0.00 38.05 3.24
88 89 9.589111 GAACCCTAAGTCATTCTTAAAGTAGAG 57.411 37.037 0.00 0.00 38.05 2.43
89 90 8.537858 GGAACCCTAAGTCATTCTTAAAGTAGA 58.462 37.037 0.00 0.00 38.05 2.59
90 91 8.719560 GGAACCCTAAGTCATTCTTAAAGTAG 57.280 38.462 0.00 0.00 38.05 2.57
111 112 3.047877 CTGCAACGGTCGGGGAAC 61.048 66.667 0.00 0.00 0.00 3.62
117 118 4.680237 TGGGAGCTGCAACGGTCG 62.680 66.667 7.79 0.00 32.39 4.79
118 119 3.050275 GTGGGAGCTGCAACGGTC 61.050 66.667 7.79 0.00 0.00 4.79
119 120 4.988598 CGTGGGAGCTGCAACGGT 62.989 66.667 25.99 0.00 32.55 4.83
120 121 4.680237 TCGTGGGAGCTGCAACGG 62.680 66.667 31.41 15.35 36.70 4.44
121 122 3.414700 GTCGTGGGAGCTGCAACG 61.415 66.667 27.51 27.51 37.38 4.10
122 123 3.414700 CGTCGTGGGAGCTGCAAC 61.415 66.667 7.79 4.80 0.00 4.17
123 124 3.858868 GACGTCGTGGGAGCTGCAA 62.859 63.158 7.79 0.00 0.00 4.08
124 125 4.357947 GACGTCGTGGGAGCTGCA 62.358 66.667 7.79 0.00 0.00 4.41
126 127 4.436998 GGGACGTCGTGGGAGCTG 62.437 72.222 9.92 0.00 0.00 4.24
127 128 4.680537 AGGGACGTCGTGGGAGCT 62.681 66.667 9.92 0.00 0.00 4.09
128 129 4.131088 GAGGGACGTCGTGGGAGC 62.131 72.222 9.92 0.00 0.00 4.70
129 130 1.077930 TAGAGGGACGTCGTGGGAG 60.078 63.158 9.92 0.00 0.00 4.30
130 131 1.377725 GTAGAGGGACGTCGTGGGA 60.378 63.158 9.92 0.00 0.00 4.37
131 132 2.413142 GGTAGAGGGACGTCGTGGG 61.413 68.421 9.92 0.00 0.00 4.61
132 133 0.964358 AAGGTAGAGGGACGTCGTGG 60.964 60.000 9.92 0.00 0.00 4.94
133 134 0.450983 GAAGGTAGAGGGACGTCGTG 59.549 60.000 9.92 0.00 0.00 4.35
134 135 0.679321 GGAAGGTAGAGGGACGTCGT 60.679 60.000 9.92 0.00 0.00 4.34
135 136 0.394080 AGGAAGGTAGAGGGACGTCG 60.394 60.000 9.92 0.00 0.00 5.12
136 137 1.477295 CAAGGAAGGTAGAGGGACGTC 59.523 57.143 7.13 7.13 0.00 4.34
137 138 1.203149 ACAAGGAAGGTAGAGGGACGT 60.203 52.381 0.00 0.00 0.00 4.34
138 139 1.558233 ACAAGGAAGGTAGAGGGACG 58.442 55.000 0.00 0.00 0.00 4.79
139 140 2.094130 CGAACAAGGAAGGTAGAGGGAC 60.094 54.545 0.00 0.00 0.00 4.46
140 141 2.176889 CGAACAAGGAAGGTAGAGGGA 58.823 52.381 0.00 0.00 0.00 4.20
141 142 2.166664 CTCGAACAAGGAAGGTAGAGGG 59.833 54.545 0.00 0.00 0.00 4.30
142 143 2.826725 ACTCGAACAAGGAAGGTAGAGG 59.173 50.000 0.00 0.00 31.53 3.69
143 144 3.506455 TCACTCGAACAAGGAAGGTAGAG 59.494 47.826 0.00 0.00 32.71 2.43
144 145 3.493334 TCACTCGAACAAGGAAGGTAGA 58.507 45.455 0.00 0.00 0.00 2.59
145 146 3.936372 TCACTCGAACAAGGAAGGTAG 57.064 47.619 0.00 0.00 0.00 3.18
146 147 3.056107 CCATCACTCGAACAAGGAAGGTA 60.056 47.826 0.00 0.00 0.00 3.08
147 148 2.289694 CCATCACTCGAACAAGGAAGGT 60.290 50.000 0.00 0.00 0.00 3.50
148 149 2.289694 ACCATCACTCGAACAAGGAAGG 60.290 50.000 0.00 0.00 0.00 3.46
149 150 2.738846 CACCATCACTCGAACAAGGAAG 59.261 50.000 0.00 0.00 0.00 3.46
150 151 2.549992 CCACCATCACTCGAACAAGGAA 60.550 50.000 0.00 0.00 0.00 3.36
151 152 1.001974 CCACCATCACTCGAACAAGGA 59.998 52.381 0.00 0.00 0.00 3.36
152 153 1.270839 ACCACCATCACTCGAACAAGG 60.271 52.381 0.00 0.00 0.00 3.61
153 154 2.069273 GACCACCATCACTCGAACAAG 58.931 52.381 0.00 0.00 0.00 3.16
154 155 1.414550 TGACCACCATCACTCGAACAA 59.585 47.619 0.00 0.00 0.00 2.83
155 156 1.044611 TGACCACCATCACTCGAACA 58.955 50.000 0.00 0.00 0.00 3.18
156 157 2.002586 CATGACCACCATCACTCGAAC 58.997 52.381 0.00 0.00 31.94 3.95
157 158 1.066215 CCATGACCACCATCACTCGAA 60.066 52.381 0.00 0.00 31.94 3.71
158 159 0.536724 CCATGACCACCATCACTCGA 59.463 55.000 0.00 0.00 31.94 4.04
159 160 1.091771 GCCATGACCACCATCACTCG 61.092 60.000 0.00 0.00 31.94 4.18
160 161 1.091771 CGCCATGACCACCATCACTC 61.092 60.000 0.00 0.00 31.94 3.51
161 162 1.078214 CGCCATGACCACCATCACT 60.078 57.895 0.00 0.00 31.94 3.41
162 163 1.078497 TCGCCATGACCACCATCAC 60.078 57.895 0.00 0.00 31.94 3.06
163 164 1.078497 GTCGCCATGACCACCATCA 60.078 57.895 0.00 0.00 42.04 3.07
164 165 3.813596 GTCGCCATGACCACCATC 58.186 61.111 0.00 0.00 42.04 3.51
172 173 1.079612 CACTGCTCAGTCGCCATGA 60.080 57.895 0.00 0.00 40.20 3.07
173 174 2.104859 CCACTGCTCAGTCGCCATG 61.105 63.158 0.00 0.00 40.20 3.66
174 175 2.116983 AACCACTGCTCAGTCGCCAT 62.117 55.000 0.00 0.00 40.20 4.40
175 176 2.807107 AACCACTGCTCAGTCGCCA 61.807 57.895 0.00 0.00 40.20 5.69
176 177 2.031163 AACCACTGCTCAGTCGCC 59.969 61.111 0.00 0.00 40.20 5.54
177 178 0.880278 TTCAACCACTGCTCAGTCGC 60.880 55.000 0.00 0.00 40.20 5.19
178 179 1.143305 CTTCAACCACTGCTCAGTCG 58.857 55.000 0.00 0.00 40.20 4.18
179 180 2.224161 ACTCTTCAACCACTGCTCAGTC 60.224 50.000 0.00 0.00 40.20 3.51
180 181 1.765314 ACTCTTCAACCACTGCTCAGT 59.235 47.619 0.00 0.00 43.61 3.41
181 182 2.141517 CACTCTTCAACCACTGCTCAG 58.858 52.381 0.00 0.00 0.00 3.35
182 183 1.762370 TCACTCTTCAACCACTGCTCA 59.238 47.619 0.00 0.00 0.00 4.26
183 184 2.139118 GTCACTCTTCAACCACTGCTC 58.861 52.381 0.00 0.00 0.00 4.26
184 185 1.539065 CGTCACTCTTCAACCACTGCT 60.539 52.381 0.00 0.00 0.00 4.24
185 186 0.861837 CGTCACTCTTCAACCACTGC 59.138 55.000 0.00 0.00 0.00 4.40
186 187 2.128035 GACGTCACTCTTCAACCACTG 58.872 52.381 11.55 0.00 0.00 3.66
187 188 1.269102 CGACGTCACTCTTCAACCACT 60.269 52.381 17.16 0.00 0.00 4.00
188 189 1.129326 CGACGTCACTCTTCAACCAC 58.871 55.000 17.16 0.00 0.00 4.16
189 190 1.001706 CTCGACGTCACTCTTCAACCA 60.002 52.381 17.16 0.00 0.00 3.67
190 191 1.666311 CCTCGACGTCACTCTTCAACC 60.666 57.143 17.16 0.00 0.00 3.77
191 192 1.001597 ACCTCGACGTCACTCTTCAAC 60.002 52.381 17.16 0.00 0.00 3.18
192 193 1.001706 CACCTCGACGTCACTCTTCAA 60.002 52.381 17.16 0.00 0.00 2.69
193 194 0.591659 CACCTCGACGTCACTCTTCA 59.408 55.000 17.16 0.00 0.00 3.02
194 195 0.592148 ACACCTCGACGTCACTCTTC 59.408 55.000 17.16 0.00 0.00 2.87
195 196 0.592148 GACACCTCGACGTCACTCTT 59.408 55.000 17.16 0.00 32.24 2.85
196 197 1.235948 GGACACCTCGACGTCACTCT 61.236 60.000 17.16 0.00 33.66 3.24
197 198 1.209640 GGACACCTCGACGTCACTC 59.790 63.158 17.16 0.00 33.66 3.51
198 199 1.105167 TTGGACACCTCGACGTCACT 61.105 55.000 17.16 0.00 33.66 3.41
199 200 0.663568 CTTGGACACCTCGACGTCAC 60.664 60.000 17.16 0.00 33.66 3.67
200 201 1.105167 ACTTGGACACCTCGACGTCA 61.105 55.000 17.16 1.87 33.66 4.35
201 202 0.663568 CACTTGGACACCTCGACGTC 60.664 60.000 5.18 5.18 0.00 4.34
202 203 1.362717 CACTTGGACACCTCGACGT 59.637 57.895 0.00 0.00 0.00 4.34
203 204 1.372997 CCACTTGGACACCTCGACG 60.373 63.158 0.00 0.00 37.39 5.12
204 205 2.046938 TCCACTTGGACACCTCGAC 58.953 57.895 0.00 0.00 39.78 4.20
205 206 4.611119 TCCACTTGGACACCTCGA 57.389 55.556 0.00 0.00 39.78 4.04
213 214 1.707106 TAACAGGACGTCCACTTGGA 58.293 50.000 35.00 14.79 43.08 3.53
214 215 2.762535 ATAACAGGACGTCCACTTGG 57.237 50.000 35.00 20.19 38.89 3.61
215 216 3.176708 CGTATAACAGGACGTCCACTTG 58.823 50.000 35.00 26.00 38.89 3.16
216 217 2.416431 GCGTATAACAGGACGTCCACTT 60.416 50.000 35.00 25.48 41.13 3.16
217 218 1.133790 GCGTATAACAGGACGTCCACT 59.866 52.381 35.00 20.72 41.13 4.00
218 219 1.135315 TGCGTATAACAGGACGTCCAC 60.135 52.381 35.00 21.76 41.13 4.02
219 220 1.175654 TGCGTATAACAGGACGTCCA 58.824 50.000 35.00 16.17 41.13 4.02
220 221 2.034305 AGATGCGTATAACAGGACGTCC 59.966 50.000 27.67 27.67 41.13 4.79
221 222 3.043586 CAGATGCGTATAACAGGACGTC 58.956 50.000 7.13 7.13 41.13 4.34
222 223 2.686405 TCAGATGCGTATAACAGGACGT 59.314 45.455 0.00 0.00 41.13 4.34
223 224 3.349488 TCAGATGCGTATAACAGGACG 57.651 47.619 0.00 0.00 41.97 4.79
224 225 5.582439 CATTCAGATGCGTATAACAGGAC 57.418 43.478 0.00 0.00 0.00 3.85
237 238 1.662629 GACCACACTCGCATTCAGATG 59.337 52.381 0.00 0.00 36.32 2.90
238 239 1.406069 GGACCACACTCGCATTCAGAT 60.406 52.381 0.00 0.00 0.00 2.90
239 240 0.037326 GGACCACACTCGCATTCAGA 60.037 55.000 0.00 0.00 0.00 3.27
240 241 0.036952 AGGACCACACTCGCATTCAG 60.037 55.000 0.00 0.00 0.00 3.02
241 242 1.262417 TAGGACCACACTCGCATTCA 58.738 50.000 0.00 0.00 0.00 2.57
242 243 2.094182 TCTTAGGACCACACTCGCATTC 60.094 50.000 0.00 0.00 0.00 2.67
243 244 1.899814 TCTTAGGACCACACTCGCATT 59.100 47.619 0.00 0.00 0.00 3.56
244 245 1.204941 GTCTTAGGACCACACTCGCAT 59.795 52.381 0.00 0.00 36.53 4.73
245 246 0.601558 GTCTTAGGACCACACTCGCA 59.398 55.000 0.00 0.00 36.53 5.10
246 247 3.420397 GTCTTAGGACCACACTCGC 57.580 57.895 0.00 0.00 36.53 5.03
255 256 4.962155 CCATCATTGGTAGGTCTTAGGAC 58.038 47.826 0.00 0.00 38.30 3.85
269 270 1.000739 AGCCCCCACACCATCATTG 59.999 57.895 0.00 0.00 0.00 2.82
270 271 1.217057 AGAGCCCCCACACCATCATT 61.217 55.000 0.00 0.00 0.00 2.57
271 272 0.327480 TAGAGCCCCCACACCATCAT 60.327 55.000 0.00 0.00 0.00 2.45
272 273 0.982852 CTAGAGCCCCCACACCATCA 60.983 60.000 0.00 0.00 0.00 3.07
273 274 1.700042 CCTAGAGCCCCCACACCATC 61.700 65.000 0.00 0.00 0.00 3.51
274 275 1.694169 CCTAGAGCCCCCACACCAT 60.694 63.158 0.00 0.00 0.00 3.55
275 276 2.285368 CCTAGAGCCCCCACACCA 60.285 66.667 0.00 0.00 0.00 4.17
276 277 2.285442 ACCTAGAGCCCCCACACC 60.285 66.667 0.00 0.00 0.00 4.16
277 278 2.670148 CCACCTAGAGCCCCCACAC 61.670 68.421 0.00 0.00 0.00 3.82
278 279 2.285368 CCACCTAGAGCCCCCACA 60.285 66.667 0.00 0.00 0.00 4.17
279 280 2.040606 TCCACCTAGAGCCCCCAC 59.959 66.667 0.00 0.00 0.00 4.61
280 281 2.040606 GTCCACCTAGAGCCCCCA 59.959 66.667 0.00 0.00 0.00 4.96
281 282 2.768769 GGTCCACCTAGAGCCCCC 60.769 72.222 0.00 0.00 0.00 5.40
282 283 2.768769 GGGTCCACCTAGAGCCCC 60.769 72.222 0.00 0.00 46.64 5.80
289 290 0.415830 TGTCATCTGGGGTCCACCTA 59.584 55.000 0.00 0.00 40.03 3.08
290 291 0.911525 CTGTCATCTGGGGTCCACCT 60.912 60.000 0.00 0.00 40.03 4.00
291 292 1.604378 CTGTCATCTGGGGTCCACC 59.396 63.158 0.00 0.00 39.11 4.61
292 293 1.201429 ACCTGTCATCTGGGGTCCAC 61.201 60.000 0.00 0.00 37.05 4.02
293 294 0.909610 GACCTGTCATCTGGGGTCCA 60.910 60.000 0.00 0.00 41.48 4.02
294 295 1.908483 GACCTGTCATCTGGGGTCC 59.092 63.158 0.00 0.00 41.48 4.46
295 296 0.618968 AGGACCTGTCATCTGGGGTC 60.619 60.000 0.00 0.00 45.18 4.46
296 297 0.178861 AAGGACCTGTCATCTGGGGT 60.179 55.000 0.00 0.00 37.05 4.95
297 298 1.879575 TAAGGACCTGTCATCTGGGG 58.120 55.000 0.00 0.00 37.05 4.96
298 299 2.092914 GGTTAAGGACCTGTCATCTGGG 60.093 54.545 0.00 0.00 45.55 4.45
299 300 3.268023 GGTTAAGGACCTGTCATCTGG 57.732 52.381 0.00 0.00 45.55 3.86
334 335 4.916041 AAAGAAGATGGTGATGAGGTCA 57.084 40.909 0.00 0.00 0.00 4.02
335 336 4.806247 CGTAAAGAAGATGGTGATGAGGTC 59.194 45.833 0.00 0.00 0.00 3.85
336 337 4.383118 CCGTAAAGAAGATGGTGATGAGGT 60.383 45.833 0.00 0.00 0.00 3.85
337 338 4.122776 CCGTAAAGAAGATGGTGATGAGG 58.877 47.826 0.00 0.00 0.00 3.86
338 339 3.557595 GCCGTAAAGAAGATGGTGATGAG 59.442 47.826 0.00 0.00 0.00 2.90
339 340 3.055458 TGCCGTAAAGAAGATGGTGATGA 60.055 43.478 0.00 0.00 0.00 2.92
340 341 3.063997 GTGCCGTAAAGAAGATGGTGATG 59.936 47.826 0.00 0.00 0.00 3.07
341 342 3.270877 GTGCCGTAAAGAAGATGGTGAT 58.729 45.455 0.00 0.00 0.00 3.06
342 343 2.037902 TGTGCCGTAAAGAAGATGGTGA 59.962 45.455 0.00 0.00 0.00 4.02
343 344 2.422597 TGTGCCGTAAAGAAGATGGTG 58.577 47.619 0.00 0.00 0.00 4.17
344 345 2.812011 GTTGTGCCGTAAAGAAGATGGT 59.188 45.455 0.00 0.00 0.00 3.55
348 349 2.512485 TCGTTGTGCCGTAAAGAAGA 57.488 45.000 0.00 0.00 0.00 2.87
355 356 3.018666 CACGTATCGTTGTGCCGTA 57.981 52.632 0.00 0.00 38.32 4.02
381 382 2.759973 CGGGGTAGCCAGAGAGCA 60.760 66.667 14.06 0.00 34.23 4.26
383 384 2.128507 GGTCGGGGTAGCCAGAGAG 61.129 68.421 14.40 0.00 0.00 3.20
388 389 3.000819 CTGTGGTCGGGGTAGCCA 61.001 66.667 14.06 0.00 0.00 4.75
414 415 0.390866 CTGGGTGCTAGTGCTGACAG 60.391 60.000 0.00 0.00 40.48 3.51
419 420 2.997315 TCGCTGGGTGCTAGTGCT 60.997 61.111 0.00 0.00 40.48 4.40
424 425 4.129737 GAGCGTCGCTGGGTGCTA 62.130 66.667 27.16 0.00 39.88 3.49
437 438 1.732917 CAGCTACTCCTCCTGAGCG 59.267 63.158 0.00 0.00 45.61 5.03
450 451 1.509463 CCGTCACCGTTAGCAGCTA 59.491 57.895 0.00 0.00 0.00 3.32
451 452 2.261671 CCGTCACCGTTAGCAGCT 59.738 61.111 0.00 0.00 0.00 4.24
453 454 1.736645 CACCCGTCACCGTTAGCAG 60.737 63.158 0.00 0.00 0.00 4.24
454 455 2.340809 CACCCGTCACCGTTAGCA 59.659 61.111 0.00 0.00 0.00 3.49
455 456 3.116531 GCACCCGTCACCGTTAGC 61.117 66.667 0.00 0.00 0.00 3.09
456 457 2.433664 GGCACCCGTCACCGTTAG 60.434 66.667 0.00 0.00 0.00 2.34
457 458 4.360964 CGGCACCCGTCACCGTTA 62.361 66.667 0.00 0.00 42.73 3.18
484 485 0.322456 CTTCCCCAATGAGGCGACAA 60.322 55.000 0.00 0.00 35.39 3.18
522 523 4.835891 AGCTACTACCCCGCGGCT 62.836 66.667 22.85 8.20 0.00 5.52
601 612 1.525077 CTCCTCGAGCTAGTCCGCT 60.525 63.158 6.99 0.00 44.33 5.52
608 619 1.378119 TTGCCGACTCCTCGAGCTA 60.378 57.895 6.99 0.00 43.06 3.32
645 657 1.967779 TCCGATATCGCCTCCAATGAA 59.032 47.619 19.78 0.00 38.18 2.57
675 687 1.599047 CACCTTCTCCGTCATGGCT 59.401 57.895 0.00 0.00 37.80 4.75
689 701 2.283809 CCCCGATCTCTCCCACCT 59.716 66.667 0.00 0.00 0.00 4.00
702 714 1.133450 TCTCATACCTTCCTCTCCCCG 60.133 57.143 0.00 0.00 0.00 5.73
723 735 2.363018 CTCTCCGCTCCACTCCCA 60.363 66.667 0.00 0.00 0.00 4.37
752 764 1.450211 CCAAACCCCACTCACTCGT 59.550 57.895 0.00 0.00 0.00 4.18
780 793 1.377725 CCACCTAACCAGCTGCCAG 60.378 63.158 8.66 4.32 0.00 4.85
785 798 2.381752 AAAAAGCCACCTAACCAGCT 57.618 45.000 0.00 0.00 37.10 4.24
834 860 3.387947 CCCGTAGCCGTCCCAACT 61.388 66.667 0.00 0.00 0.00 3.16
855 881 4.437239 CCGATTAGGGCATCTATGATCAC 58.563 47.826 0.00 0.00 35.97 3.06
869 895 4.044336 TGATTTTTGCATGCCGATTAGG 57.956 40.909 16.68 0.00 44.97 2.69
920 946 1.659098 GCGATCGAACGTCAGGAAATT 59.341 47.619 21.57 0.00 35.59 1.82
932 958 1.227350 CTGCCCATGAGCGATCGAA 60.227 57.895 21.57 3.37 34.65 3.71
1373 1522 2.333389 AGAGTTACTGACGACGCTTG 57.667 50.000 0.00 0.00 0.00 4.01
1537 2359 9.467796 CCTCCCAGAAGAAAGAAAATATTAGTT 57.532 33.333 0.00 0.00 0.00 2.24
1718 2966 5.664457 TCTGTGCGATAGATTGTCTGAAAT 58.336 37.500 0.00 0.00 39.76 2.17
1723 2971 3.449018 ACCTTCTGTGCGATAGATTGTCT 59.551 43.478 0.00 0.00 39.76 3.41
1876 3127 7.538303 TGCACATAATATGTAAGTGTCAGTG 57.462 36.000 5.49 0.00 42.70 3.66
1967 3218 7.939784 ATATAGACGTATTGGAGCACTATGA 57.060 36.000 0.00 0.00 0.00 2.15
2118 3370 6.205658 GTCAACTTTTACTCAAGGCAGAAGAT 59.794 38.462 0.00 0.00 0.00 2.40
2172 3427 7.913674 ATTCATTAGAGTTTCTCACTGGAAC 57.086 36.000 0.00 0.00 35.01 3.62
2353 3625 3.744719 CCGACGGTCAAGAGGCGA 61.745 66.667 5.48 0.00 0.00 5.54
2493 4535 5.661458 AGTCAGCTTACGTTTGTGCTATAT 58.339 37.500 0.00 0.00 34.10 0.86
2499 4541 4.904116 TCAAAAGTCAGCTTACGTTTGTG 58.096 39.130 27.29 13.04 44.23 3.33
2543 4585 3.490759 CTAGCAACGCTGGCACCG 61.491 66.667 0.00 0.00 40.10 4.94
3001 5075 4.973168 TCTTAAACTGAGGTTCACTGCAT 58.027 39.130 0.00 0.00 34.14 3.96
3025 5099 1.771854 TGTAAACCTGTTCAGAGGGCA 59.228 47.619 1.00 0.00 37.45 5.36
3316 5399 9.905713 TGGTATAATATCTTTTCTGTGCTCTTT 57.094 29.630 0.00 0.00 0.00 2.52
3524 5608 6.154363 TCCAAATGTTTCTTTCCTGTTCACTT 59.846 34.615 0.00 0.00 0.00 3.16
3525 5609 5.656416 TCCAAATGTTTCTTTCCTGTTCACT 59.344 36.000 0.00 0.00 0.00 3.41
3531 5615 4.039609 AGGCTTCCAAATGTTTCTTTCCTG 59.960 41.667 0.00 0.00 0.00 3.86
3532 5616 4.226384 AGGCTTCCAAATGTTTCTTTCCT 58.774 39.130 0.00 0.00 0.00 3.36
3685 7512 2.693074 TGTTCTAGCCGCATATGTCTGA 59.307 45.455 4.29 0.00 0.00 3.27
3686 7513 2.797156 GTGTTCTAGCCGCATATGTCTG 59.203 50.000 4.29 0.00 0.00 3.51
3893 7782 4.122776 AGCATGACACTGAATATTCCGAC 58.877 43.478 12.90 3.22 0.00 4.79
3945 7873 6.261826 AGAAGAAGCACATTACCTATGCAATC 59.738 38.462 0.00 0.00 41.97 2.67
3959 7887 5.925509 ACTGTACCTAAAAGAAGAAGCACA 58.074 37.500 0.00 0.00 0.00 4.57
3985 7913 8.816640 AAACTTTATGCTTTTACCATGAACAG 57.183 30.769 0.00 0.00 0.00 3.16
4041 7972 1.335132 TAAACCCTAGGGCTGCCGAG 61.335 60.000 28.88 12.16 39.32 4.63
4131 8074 0.911769 CAGGGGCAGTATCACTTCCA 59.088 55.000 0.00 0.00 32.91 3.53
4141 8084 1.770110 TGGAGTGAACAGGGGCAGT 60.770 57.895 0.00 0.00 0.00 4.40
4239 8195 2.742589 GGTTACCGCTCCAAGAAAGAAG 59.257 50.000 0.00 0.00 0.00 2.85
4308 8280 2.031682 CGCTGCTTATGGGCTTATTGAC 60.032 50.000 0.00 0.00 0.00 3.18
4376 8358 3.199442 TCAGGGTGGAATTCTACCTCA 57.801 47.619 32.40 18.07 45.60 3.86
4708 8705 5.665381 TCCATTTTGCAAATTTCCGTTTC 57.335 34.783 13.65 0.00 0.00 2.78
4754 8751 4.321480 ACTTTCGTTTTTGTTTCCGTTTCG 59.679 37.500 0.00 0.00 0.00 3.46
4813 8812 6.318648 CAGAAATCCCATATTCTCCAAAACGA 59.681 38.462 0.00 0.00 33.73 3.85
4819 8818 9.540538 TTAAAAACAGAAATCCCATATTCTCCA 57.459 29.630 0.00 0.00 33.73 3.86
5053 9052 8.825667 AAGAGTACACACAAAAACAAACAAAT 57.174 26.923 0.00 0.00 0.00 2.32
5074 9073 4.090066 CGAATACAGAACGGACACAAAGAG 59.910 45.833 0.00 0.00 0.00 2.85
5078 9077 3.374220 ACGAATACAGAACGGACACAA 57.626 42.857 0.00 0.00 0.00 3.33
5079 9078 3.311106 GAACGAATACAGAACGGACACA 58.689 45.455 0.00 0.00 0.00 3.72
5080 9079 2.665052 GGAACGAATACAGAACGGACAC 59.335 50.000 0.00 0.00 0.00 3.67
5081 9080 2.950433 GGAACGAATACAGAACGGACA 58.050 47.619 0.00 0.00 0.00 4.02
5097 9096 3.066203 ACCATCAAAAACAGACACGGAAC 59.934 43.478 0.00 0.00 0.00 3.62
5098 9097 3.283751 ACCATCAAAAACAGACACGGAA 58.716 40.909 0.00 0.00 0.00 4.30
5099 9098 2.925724 ACCATCAAAAACAGACACGGA 58.074 42.857 0.00 0.00 0.00 4.69
5100 9099 4.695455 AGATACCATCAAAAACAGACACGG 59.305 41.667 0.00 0.00 0.00 4.94
5101 9100 5.862924 AGATACCATCAAAAACAGACACG 57.137 39.130 0.00 0.00 0.00 4.49
5102 9101 7.907214 AGTAGATACCATCAAAAACAGACAC 57.093 36.000 0.00 0.00 0.00 3.67
5103 9102 8.918202 AAAGTAGATACCATCAAAAACAGACA 57.082 30.769 0.00 0.00 0.00 3.41
5104 9103 8.999431 TGAAAGTAGATACCATCAAAAACAGAC 58.001 33.333 0.00 0.00 0.00 3.51
5105 9104 9.739276 ATGAAAGTAGATACCATCAAAAACAGA 57.261 29.630 1.03 0.00 0.00 3.41
5116 9115 9.489084 CGGAAATGAATATGAAAGTAGATACCA 57.511 33.333 0.00 0.00 0.00 3.25
5117 9116 8.936864 CCGGAAATGAATATGAAAGTAGATACC 58.063 37.037 0.00 0.00 0.00 2.73
5118 9117 8.936864 CCCGGAAATGAATATGAAAGTAGATAC 58.063 37.037 0.73 0.00 0.00 2.24
5119 9118 8.100791 CCCCGGAAATGAATATGAAAGTAGATA 58.899 37.037 0.73 0.00 0.00 1.98
5120 9119 6.942576 CCCCGGAAATGAATATGAAAGTAGAT 59.057 38.462 0.73 0.00 0.00 1.98
5121 9120 6.126594 ACCCCGGAAATGAATATGAAAGTAGA 60.127 38.462 0.73 0.00 0.00 2.59
5122 9121 6.062095 ACCCCGGAAATGAATATGAAAGTAG 58.938 40.000 0.73 0.00 0.00 2.57
5123 9122 6.008696 ACCCCGGAAATGAATATGAAAGTA 57.991 37.500 0.73 0.00 0.00 2.24
5124 9123 4.867086 ACCCCGGAAATGAATATGAAAGT 58.133 39.130 0.73 0.00 0.00 2.66
5125 9124 5.852282 AACCCCGGAAATGAATATGAAAG 57.148 39.130 0.73 0.00 0.00 2.62
5126 9125 5.955355 AGAAACCCCGGAAATGAATATGAAA 59.045 36.000 0.73 0.00 0.00 2.69
5127 9126 5.359576 CAGAAACCCCGGAAATGAATATGAA 59.640 40.000 0.73 0.00 0.00 2.57
5128 9127 4.887071 CAGAAACCCCGGAAATGAATATGA 59.113 41.667 0.73 0.00 0.00 2.15
5129 9128 4.644685 ACAGAAACCCCGGAAATGAATATG 59.355 41.667 0.73 0.00 0.00 1.78
5130 9129 4.867086 ACAGAAACCCCGGAAATGAATAT 58.133 39.130 0.73 0.00 0.00 1.28
5131 9130 4.310022 ACAGAAACCCCGGAAATGAATA 57.690 40.909 0.73 0.00 0.00 1.75
5132 9131 3.169512 ACAGAAACCCCGGAAATGAAT 57.830 42.857 0.73 0.00 0.00 2.57
5133 9132 2.668144 ACAGAAACCCCGGAAATGAA 57.332 45.000 0.73 0.00 0.00 2.57
5134 9133 4.266714 GAATACAGAAACCCCGGAAATGA 58.733 43.478 0.73 0.00 0.00 2.57
5135 9134 3.064820 CGAATACAGAAACCCCGGAAATG 59.935 47.826 0.73 0.00 0.00 2.32
5136 9135 3.275999 CGAATACAGAAACCCCGGAAAT 58.724 45.455 0.73 0.00 0.00 2.17
5137 9136 2.038820 ACGAATACAGAAACCCCGGAAA 59.961 45.455 0.73 0.00 0.00 3.13
5138 9137 1.624813 ACGAATACAGAAACCCCGGAA 59.375 47.619 0.73 0.00 0.00 4.30
5139 9138 1.269012 ACGAATACAGAAACCCCGGA 58.731 50.000 0.73 0.00 0.00 5.14
5140 9139 2.103537 AACGAATACAGAAACCCCGG 57.896 50.000 0.00 0.00 0.00 5.73
5141 9140 2.417586 GGAAACGAATACAGAAACCCCG 59.582 50.000 0.00 0.00 0.00 5.73


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.