Multiple sequence alignment - TraesCS4A01G426700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G426700 chr4A 100.000 3923 0 0 1 3923 698038681 698042603 0.000000e+00 7245
1 TraesCS4A01G426700 chr4A 92.498 1573 106 9 1903 3471 697952716 697954280 0.000000e+00 2241
2 TraesCS4A01G426700 chr4A 89.377 1638 138 9 8 1639 697950850 697952457 0.000000e+00 2028
3 TraesCS4A01G426700 chr4A 90.196 204 15 3 1683 1881 697952520 697952723 1.080000e-65 261
4 TraesCS4A01G426700 chr7D 87.361 1891 138 35 1 1881 30841445 30839646 0.000000e+00 2074
5 TraesCS4A01G426700 chr7D 89.918 1577 104 28 1903 3474 30839653 30838127 0.000000e+00 1980
6 TraesCS4A01G426700 chr7A 90.506 1580 89 24 1909 3474 31101847 31100315 0.000000e+00 2030
7 TraesCS4A01G426700 chr7A 89.820 1552 121 15 304 1833 31103424 31101888 0.000000e+00 1956
8 TraesCS4A01G426700 chr7A 90.523 306 29 0 1 306 31103810 31103505 4.720000e-109 405
9 TraesCS4A01G426700 chr5B 84.076 157 18 7 3469 3618 373665556 373665712 1.140000e-30 145


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G426700 chr4A 698038681 698042603 3922 False 7245.000000 7245 100.000000 1 3923 1 chr4A.!!$F1 3922
1 TraesCS4A01G426700 chr4A 697950850 697954280 3430 False 1510.000000 2241 90.690333 8 3471 3 chr4A.!!$F2 3463
2 TraesCS4A01G426700 chr7D 30838127 30841445 3318 True 2027.000000 2074 88.639500 1 3474 2 chr7D.!!$R1 3473
3 TraesCS4A01G426700 chr7A 31100315 31103810 3495 True 1463.666667 2030 90.283000 1 3474 3 chr7A.!!$R1 3473

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
49 50 0.107945 GGAGCTCTTGTCGCCAGATT 60.108 55.0 14.64 0.0 0.0 2.40 F
1030 1124 0.032615 TGGAAGGTTGGTGTTGGCTT 60.033 50.0 0.00 0.0 0.0 4.35 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1645 1760 0.107848 GGTGGCAGCCGTTATGTAGT 60.108 55.0 7.03 0.0 0.0 2.73 R
2923 3080 0.528017 TTCAGACGTAGGCAGCTCAG 59.472 55.0 0.00 0.0 0.0 3.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 9.379791 GTTATTTTGCCTACTATTACTGTCAGT 57.620 33.333 10.99 10.99 0.00 3.41
49 50 0.107945 GGAGCTCTTGTCGCCAGATT 60.108 55.000 14.64 0.00 0.00 2.40
54 55 0.317160 TCTTGTCGCCAGATTCGTGT 59.683 50.000 0.00 0.00 0.00 4.49
209 214 2.470628 CGATCTGTAGAAATCGCTGCAG 59.529 50.000 10.11 10.11 46.09 4.41
235 240 5.283060 GATGGCATTTCATCCGTATACAC 57.717 43.478 0.00 0.00 38.00 2.90
242 247 7.172532 GGCATTTCATCCGTATACACTGAAATA 59.827 37.037 23.25 9.57 41.92 1.40
243 248 8.223769 GCATTTCATCCGTATACACTGAAATAG 58.776 37.037 23.25 19.74 41.92 1.73
265 270 5.925509 AGTACATATCCTAAATTGCACGGT 58.074 37.500 0.00 0.00 0.00 4.83
272 277 6.767524 ATCCTAAATTGCACGGTTAAATGA 57.232 33.333 0.00 0.00 0.00 2.57
371 459 5.307196 TCTCTACCCAATGTATAAGGAAGGC 59.693 44.000 0.00 0.00 0.00 4.35
372 460 3.595190 ACCCAATGTATAAGGAAGGCC 57.405 47.619 0.00 0.00 0.00 5.19
418 506 5.553123 ACGGATACCATGTTTGTTCTTGTA 58.447 37.500 0.00 0.00 0.00 2.41
419 507 5.998981 ACGGATACCATGTTTGTTCTTGTAA 59.001 36.000 0.00 0.00 0.00 2.41
420 508 6.487331 ACGGATACCATGTTTGTTCTTGTAAA 59.513 34.615 0.00 0.00 0.00 2.01
421 509 7.013464 ACGGATACCATGTTTGTTCTTGTAAAA 59.987 33.333 0.00 0.00 0.00 1.52
485 573 9.851686 TGTAAAGATAATATGCCTGAATGTCTT 57.148 29.630 0.00 0.00 0.00 3.01
489 577 9.851686 AAGATAATATGCCTGAATGTCTTACAA 57.148 29.630 0.00 0.00 0.00 2.41
490 578 9.277783 AGATAATATGCCTGAATGTCTTACAAC 57.722 33.333 0.00 0.00 0.00 3.32
611 699 4.910458 ATGTATAGGCCAACCATCCTAC 57.090 45.455 5.01 0.00 37.74 3.18
613 701 1.056660 ATAGGCCAACCATCCTACCG 58.943 55.000 5.01 0.00 37.74 4.02
628 716 2.159014 CCTACCGATTTTGTCCCGATCA 60.159 50.000 0.00 0.00 0.00 2.92
651 739 7.036829 TCAATTGTTGATGGTGCAATTATCTG 58.963 34.615 5.13 0.00 39.79 2.90
661 749 3.075866 GCAATTATCTGCAACTGGAGC 57.924 47.619 0.00 0.00 42.17 4.70
662 750 2.424601 GCAATTATCTGCAACTGGAGCA 59.575 45.455 0.00 0.00 42.17 4.26
727 818 5.106673 GGACAAACAAACTAGACATGCTACC 60.107 44.000 0.00 0.00 0.00 3.18
804 898 2.320745 TGAGTGTATCGCTCTCGGTA 57.679 50.000 10.82 0.00 41.09 4.02
814 908 2.991190 TCGCTCTCGGTACATTGAAAAC 59.009 45.455 0.00 0.00 36.13 2.43
831 925 3.574284 AAACATTGATAGCTTTGCGCA 57.426 38.095 5.66 5.66 42.61 6.09
840 934 2.514205 AGCTTTGCGCAATTGAAAGT 57.486 40.000 25.64 5.92 42.61 2.66
880 974 1.795768 TGAGATGGTGCGACAAAGAC 58.204 50.000 0.00 0.00 0.00 3.01
915 1009 0.865111 CAACGTGCCAAATGAGACGA 59.135 50.000 0.00 0.00 35.77 4.20
936 1030 4.704833 ATGCGCGCTCTTGGTGGT 62.705 61.111 33.29 3.78 0.00 4.16
969 1063 9.242477 CCTATAAATACATAGCTCATCATCACG 57.758 37.037 0.00 0.00 0.00 4.35
987 1081 0.522180 CGAAGGACGTACACTGAGCT 59.478 55.000 0.00 0.00 37.22 4.09
1030 1124 0.032615 TGGAAGGTTGGTGTTGGCTT 60.033 50.000 0.00 0.00 0.00 4.35
1039 1133 0.534203 GGTGTTGGCTTCCTTCGTGA 60.534 55.000 0.00 0.00 0.00 4.35
1042 1136 0.878961 GTTGGCTTCCTTCGTGACGT 60.879 55.000 4.40 0.00 0.00 4.34
1068 1162 1.153107 CGCCATCTTGCTCCCATCA 60.153 57.895 0.00 0.00 0.00 3.07
1071 1165 0.822532 CCATCTTGCTCCCATCAGCC 60.823 60.000 0.00 0.00 38.80 4.85
1117 1211 1.651987 GCCGTTCGATTCCATCTTCA 58.348 50.000 0.00 0.00 0.00 3.02
1177 1271 0.319211 CGTCTTCGGCTGGTACAACA 60.319 55.000 0.00 0.00 38.70 3.33
1206 1300 2.872388 CGTGATGCGCCCTCCCTAT 61.872 63.158 4.18 0.00 0.00 2.57
1344 1438 7.715265 ATATGTGTATTTCAAGGTGATCGAC 57.285 36.000 0.00 0.00 0.00 4.20
1345 1439 4.888917 TGTGTATTTCAAGGTGATCGACA 58.111 39.130 0.00 0.00 0.00 4.35
1346 1440 5.487433 TGTGTATTTCAAGGTGATCGACAT 58.513 37.500 0.00 0.00 0.00 3.06
1347 1441 6.635755 TGTGTATTTCAAGGTGATCGACATA 58.364 36.000 0.00 0.00 0.00 2.29
1348 1442 7.272244 TGTGTATTTCAAGGTGATCGACATAT 58.728 34.615 0.00 0.00 0.00 1.78
1349 1443 7.224557 TGTGTATTTCAAGGTGATCGACATATG 59.775 37.037 0.00 0.00 0.00 1.78
1350 1444 7.438160 GTGTATTTCAAGGTGATCGACATATGA 59.562 37.037 10.38 0.00 0.00 2.15
1351 1445 8.150296 TGTATTTCAAGGTGATCGACATATGAT 58.850 33.333 10.38 0.00 0.00 2.45
1352 1446 8.993121 GTATTTCAAGGTGATCGACATATGATT 58.007 33.333 10.38 0.00 0.00 2.57
1353 1447 7.864108 TTTCAAGGTGATCGACATATGATTT 57.136 32.000 10.38 0.00 0.00 2.17
1354 1448 7.482654 TTCAAGGTGATCGACATATGATTTC 57.517 36.000 10.38 0.00 0.00 2.17
1355 1449 5.991606 TCAAGGTGATCGACATATGATTTCC 59.008 40.000 10.38 2.82 0.00 3.13
1356 1450 5.551305 AGGTGATCGACATATGATTTCCA 57.449 39.130 10.38 0.00 0.00 3.53
1357 1451 5.545588 AGGTGATCGACATATGATTTCCAG 58.454 41.667 10.38 0.00 0.00 3.86
1358 1452 4.153117 GGTGATCGACATATGATTTCCAGC 59.847 45.833 10.38 7.51 0.00 4.85
1359 1453 4.993584 GTGATCGACATATGATTTCCAGCT 59.006 41.667 10.38 0.00 0.00 4.24
1360 1454 5.119898 GTGATCGACATATGATTTCCAGCTC 59.880 44.000 10.38 0.00 0.00 4.09
1389 1502 3.535629 CTTGCCTCTCGTGCCACCA 62.536 63.158 0.00 0.00 0.00 4.17
1398 1511 1.809619 CGTGCCACCATACCTGTCG 60.810 63.158 0.00 0.00 0.00 4.35
1431 1544 3.297620 CAGCAGGGCGCCAACTTT 61.298 61.111 30.85 6.30 44.04 2.66
1582 1695 1.826054 TGCCAAACGGACCAAGGTG 60.826 57.895 0.00 0.00 0.00 4.00
1588 1703 4.714632 CCAAACGGACCAAGGTGATATAT 58.285 43.478 0.00 0.00 0.00 0.86
1625 1740 3.569701 ACAGCGGATTGAACTGAAAATGT 59.430 39.130 0.00 0.00 35.38 2.71
1641 1756 9.515020 ACTGAAAATGTGCATAAATTAATACGG 57.485 29.630 0.00 0.00 0.00 4.02
1642 1757 9.729023 CTGAAAATGTGCATAAATTAATACGGA 57.271 29.630 0.00 0.00 0.00 4.69
1643 1758 9.729023 TGAAAATGTGCATAAATTAATACGGAG 57.271 29.630 0.00 0.00 0.00 4.63
1681 1825 1.190178 ACCCGGGTGTGGAGAACTAC 61.190 60.000 29.69 0.00 0.00 2.73
1684 1828 1.896122 CGGGTGTGGAGAACTACCCC 61.896 65.000 0.00 0.00 42.59 4.95
1692 1836 0.910088 GAGAACTACCCCAGGCCAGT 60.910 60.000 5.01 0.00 0.00 4.00
1695 1839 1.065997 AACTACCCCAGGCCAGTGTT 61.066 55.000 5.01 1.97 0.00 3.32
1755 1902 6.491394 TGAACATACACAGTAAACAAAGTGC 58.509 36.000 0.00 0.00 35.47 4.40
1837 1989 7.806409 TGACATATAATGAGTTGGATTGTGG 57.194 36.000 0.00 0.00 0.00 4.17
1848 2000 2.773487 TGGATTGTGGGTTTGAGTACG 58.227 47.619 0.00 0.00 0.00 3.67
1878 2031 7.660208 GGTAATGATATATCTTCCAACCGTTGT 59.340 37.037 13.79 0.00 0.00 3.32
1879 2032 9.701098 GTAATGATATATCTTCCAACCGTTGTA 57.299 33.333 13.79 0.00 0.00 2.41
1880 2033 8.603242 AATGATATATCTTCCAACCGTTGTAC 57.397 34.615 13.79 0.00 0.00 2.90
1881 2034 7.356089 TGATATATCTTCCAACCGTTGTACT 57.644 36.000 13.79 0.00 0.00 2.73
1882 2035 8.467963 TGATATATCTTCCAACCGTTGTACTA 57.532 34.615 13.79 0.00 0.00 1.82
1883 2036 8.355169 TGATATATCTTCCAACCGTTGTACTAC 58.645 37.037 13.79 0.00 0.00 2.73
1884 2037 3.665745 TCTTCCAACCGTTGTACTACC 57.334 47.619 10.34 0.00 0.00 3.18
1885 2038 3.233507 TCTTCCAACCGTTGTACTACCT 58.766 45.455 10.34 0.00 0.00 3.08
1886 2039 3.642848 TCTTCCAACCGTTGTACTACCTT 59.357 43.478 10.34 0.00 0.00 3.50
1887 2040 4.101430 TCTTCCAACCGTTGTACTACCTTT 59.899 41.667 10.34 0.00 0.00 3.11
1888 2041 4.420522 TCCAACCGTTGTACTACCTTTT 57.579 40.909 10.34 0.00 0.00 2.27
1889 2042 4.779696 TCCAACCGTTGTACTACCTTTTT 58.220 39.130 10.34 0.00 0.00 1.94
1907 2060 1.658686 TTTTTGCGGGACAGCGTTGT 61.659 50.000 3.93 3.93 41.18 3.32
1930 2084 4.881920 ACCATTAACCAAACACTTGATGC 58.118 39.130 0.00 0.00 34.14 3.91
1945 2099 5.346011 CACTTGATGCGCGTACATATAATCT 59.654 40.000 8.43 0.00 0.00 2.40
1992 2146 1.619827 TGCAAGGATTTCTTTGGCAGG 59.380 47.619 4.82 0.00 31.90 4.85
1998 2152 0.883833 ATTTCTTTGGCAGGTCGCTG 59.116 50.000 0.00 0.00 41.91 5.18
2145 2299 2.159128 ACTTGACTCATCATGCTCCTCG 60.159 50.000 0.00 0.00 33.85 4.63
2164 2318 1.021968 GTGTCACTCCGGCTGTTTTT 58.978 50.000 0.00 0.00 0.00 1.94
2303 2457 0.041238 TCCTGGTCACCTTCGAGGAT 59.959 55.000 0.00 0.00 37.67 3.24
2348 2502 1.371183 CACCGGCTGTCTCAAGGAA 59.629 57.895 0.00 0.00 0.00 3.36
2379 2533 2.235891 TCGTGAAGCTCCACAACTCTA 58.764 47.619 3.28 0.00 36.89 2.43
2408 2562 2.437359 GCCATCCAGAAGCTGCGT 60.437 61.111 0.00 0.00 0.00 5.24
2507 2661 3.431922 TTCGGTCGGTATCATTCTGTC 57.568 47.619 0.00 0.00 0.00 3.51
2549 2703 3.726557 AGTGCCCTGAGATTCATTTCA 57.273 42.857 0.00 0.00 0.00 2.69
2566 2720 4.875544 TTTCACTTCGAGTTTTGTCCAG 57.124 40.909 0.00 0.00 0.00 3.86
2581 2735 2.039613 TGTCCAGACATATTGCACACCA 59.960 45.455 0.00 0.00 36.21 4.17
2604 2758 8.095792 ACCATTTTGAATTCATTGTTCAGCATA 58.904 29.630 9.40 0.00 36.96 3.14
2612 2766 9.577110 GAATTCATTGTTCAGCATAAATCTTGA 57.423 29.630 0.00 0.00 0.00 3.02
2665 2822 4.085357 AGAGTAGTGGTGAACATTGCAA 57.915 40.909 0.00 0.00 0.00 4.08
2828 2985 2.036475 CGTCCACTCATCTATTCTGGGG 59.964 54.545 0.00 0.00 0.00 4.96
2884 3041 1.159285 TGCTGAAGATTGGCTCAACG 58.841 50.000 0.00 0.00 0.00 4.10
2923 3080 3.866327 GCCTACAACAGCTAGCTCTTAAC 59.134 47.826 16.15 0.00 0.00 2.01
2947 3104 1.756375 CTGCCTACGTCTGAATGCGC 61.756 60.000 0.00 0.00 0.00 6.09
3017 3174 4.520874 CAGAGTAGTCCATCATATCACCGT 59.479 45.833 0.00 0.00 0.00 4.83
3193 3353 3.864789 ATAGCACCCCATCGAGAATTT 57.135 42.857 0.00 0.00 0.00 1.82
3207 3367 4.527038 TCGAGAATTTGACCTACTTGGACT 59.473 41.667 0.00 0.00 39.71 3.85
3229 3389 5.756347 ACTGCATCACGACACTTTTTAGTAA 59.244 36.000 0.00 0.00 0.00 2.24
3284 3444 5.978322 GTCACGGACTCCTATTGAATACTTC 59.022 44.000 0.00 0.00 0.00 3.01
3285 3445 5.655090 TCACGGACTCCTATTGAATACTTCA 59.345 40.000 0.00 0.00 38.04 3.02
3333 3500 1.802960 CTGATCATAGCCATTGCGTCC 59.197 52.381 0.00 0.00 44.33 4.79
3344 3511 1.021390 ATTGCGTCCGCTCTTGGAAG 61.021 55.000 13.31 0.00 40.44 3.46
3351 3518 2.512515 GCTCTTGGAAGCGCCGAT 60.513 61.111 2.29 0.00 40.66 4.18
3382 3549 3.054166 TCACAACCATTGAAGACGTACG 58.946 45.455 15.01 15.01 0.00 3.67
3447 3614 2.408991 GCATTCAAGATCGATACGTGCG 60.409 50.000 0.00 1.66 0.00 5.34
3449 3616 1.822581 TCAAGATCGATACGTGCGTG 58.177 50.000 7.55 0.00 0.00 5.34
3453 3620 0.852777 GATCGATACGTGCGTGCAAT 59.147 50.000 7.55 0.00 0.00 3.56
3471 3638 4.310675 CAATAAATGCACGGCTTGTTTG 57.689 40.909 0.00 0.00 0.00 2.93
3473 3640 2.307934 AAATGCACGGCTTGTTTGTT 57.692 40.000 0.00 0.00 0.00 2.83
3474 3641 2.307934 AATGCACGGCTTGTTTGTTT 57.692 40.000 0.00 0.00 0.00 2.83
3475 3642 2.307934 ATGCACGGCTTGTTTGTTTT 57.692 40.000 0.00 0.00 0.00 2.43
3476 3643 2.086054 TGCACGGCTTGTTTGTTTTT 57.914 40.000 0.00 0.00 0.00 1.94
3492 3659 2.949177 TTTTTGTAGCCAGCTCCTCA 57.051 45.000 0.00 0.00 0.00 3.86
3493 3660 2.479566 TTTTGTAGCCAGCTCCTCAG 57.520 50.000 0.00 0.00 0.00 3.35
3494 3661 1.644509 TTTGTAGCCAGCTCCTCAGA 58.355 50.000 0.00 0.00 0.00 3.27
3495 3662 1.871418 TTGTAGCCAGCTCCTCAGAT 58.129 50.000 0.00 0.00 0.00 2.90
3496 3663 1.117994 TGTAGCCAGCTCCTCAGATG 58.882 55.000 0.00 0.00 35.65 2.90
3497 3664 1.118838 GTAGCCAGCTCCTCAGATGT 58.881 55.000 0.00 0.00 33.87 3.06
3498 3665 1.068434 GTAGCCAGCTCCTCAGATGTC 59.932 57.143 0.00 0.00 33.87 3.06
3499 3666 0.616964 AGCCAGCTCCTCAGATGTCA 60.617 55.000 0.00 0.00 33.87 3.58
3500 3667 0.469070 GCCAGCTCCTCAGATGTCAT 59.531 55.000 0.00 0.00 33.87 3.06
3501 3668 1.134159 GCCAGCTCCTCAGATGTCATT 60.134 52.381 0.00 0.00 33.87 2.57
3502 3669 2.683152 GCCAGCTCCTCAGATGTCATTT 60.683 50.000 0.00 0.00 33.87 2.32
3503 3670 3.204526 CCAGCTCCTCAGATGTCATTTC 58.795 50.000 0.00 0.00 33.87 2.17
3504 3671 3.370209 CCAGCTCCTCAGATGTCATTTCA 60.370 47.826 0.00 0.00 33.87 2.69
3505 3672 3.872182 CAGCTCCTCAGATGTCATTTCAG 59.128 47.826 0.00 0.00 30.83 3.02
3506 3673 3.518705 AGCTCCTCAGATGTCATTTCAGT 59.481 43.478 0.00 0.00 0.00 3.41
3507 3674 3.622163 GCTCCTCAGATGTCATTTCAGTG 59.378 47.826 0.00 0.00 0.00 3.66
3508 3675 3.603532 TCCTCAGATGTCATTTCAGTGC 58.396 45.455 0.00 0.00 0.00 4.40
3509 3676 2.350804 CCTCAGATGTCATTTCAGTGCG 59.649 50.000 0.00 0.00 0.00 5.34
3510 3677 3.256558 CTCAGATGTCATTTCAGTGCGA 58.743 45.455 0.00 0.00 0.00 5.10
3511 3678 3.663025 TCAGATGTCATTTCAGTGCGAA 58.337 40.909 0.00 0.00 0.00 4.70
3513 3680 4.514816 TCAGATGTCATTTCAGTGCGAAAA 59.485 37.500 0.00 0.00 46.48 2.29
3514 3681 5.181811 TCAGATGTCATTTCAGTGCGAAAAT 59.818 36.000 0.00 0.00 46.48 1.82
3515 3682 5.285370 CAGATGTCATTTCAGTGCGAAAATG 59.715 40.000 8.70 8.70 46.48 2.32
3516 3683 3.899734 TGTCATTTCAGTGCGAAAATGG 58.100 40.909 13.07 0.25 46.48 3.16
3517 3684 2.663119 GTCATTTCAGTGCGAAAATGGC 59.337 45.455 13.07 9.30 46.48 4.40
3518 3685 2.295629 TCATTTCAGTGCGAAAATGGCA 59.704 40.909 13.07 0.00 46.48 4.92
3519 3686 2.879002 TTTCAGTGCGAAAATGGCAA 57.121 40.000 0.00 0.00 42.92 4.52
3520 3687 2.420628 TTCAGTGCGAAAATGGCAAG 57.579 45.000 0.00 0.00 42.92 4.01
3521 3688 0.039256 TCAGTGCGAAAATGGCAAGC 60.039 50.000 0.00 0.00 42.92 4.01
3522 3689 0.318869 CAGTGCGAAAATGGCAAGCA 60.319 50.000 0.00 0.00 42.92 3.91
3523 3690 4.651585 TGCGAAAATGGCAAGCAC 57.348 50.000 0.00 0.00 37.49 4.40
3524 3691 2.040330 TGCGAAAATGGCAAGCACT 58.960 47.368 0.00 0.00 37.49 4.40
3525 3692 0.388659 TGCGAAAATGGCAAGCACTT 59.611 45.000 0.00 0.00 37.49 3.16
3526 3693 1.611006 TGCGAAAATGGCAAGCACTTA 59.389 42.857 0.00 0.00 37.49 2.24
3527 3694 2.253603 GCGAAAATGGCAAGCACTTAG 58.746 47.619 0.00 0.00 0.00 2.18
3528 3695 2.095263 GCGAAAATGGCAAGCACTTAGA 60.095 45.455 0.00 0.00 0.00 2.10
3529 3696 3.611530 GCGAAAATGGCAAGCACTTAGAA 60.612 43.478 0.00 0.00 0.00 2.10
3530 3697 4.161333 CGAAAATGGCAAGCACTTAGAAG 58.839 43.478 0.00 0.00 0.00 2.85
3531 3698 4.083324 CGAAAATGGCAAGCACTTAGAAGA 60.083 41.667 0.00 0.00 0.00 2.87
3532 3699 5.382618 AAAATGGCAAGCACTTAGAAGAG 57.617 39.130 0.00 0.00 0.00 2.85
3533 3700 3.710209 ATGGCAAGCACTTAGAAGAGT 57.290 42.857 0.00 0.00 0.00 3.24
3534 3701 4.826274 ATGGCAAGCACTTAGAAGAGTA 57.174 40.909 0.00 0.00 0.00 2.59
3535 3702 4.826274 TGGCAAGCACTTAGAAGAGTAT 57.174 40.909 0.00 0.00 0.00 2.12
3536 3703 5.165961 TGGCAAGCACTTAGAAGAGTATT 57.834 39.130 0.00 0.00 0.00 1.89
3537 3704 5.560724 TGGCAAGCACTTAGAAGAGTATTT 58.439 37.500 0.00 0.00 0.00 1.40
3538 3705 5.643777 TGGCAAGCACTTAGAAGAGTATTTC 59.356 40.000 0.00 0.00 0.00 2.17
3539 3706 5.643777 GGCAAGCACTTAGAAGAGTATTTCA 59.356 40.000 0.00 0.00 0.00 2.69
3540 3707 6.317391 GGCAAGCACTTAGAAGAGTATTTCAT 59.683 38.462 0.00 0.00 0.00 2.57
3541 3708 7.405769 GCAAGCACTTAGAAGAGTATTTCATC 58.594 38.462 0.00 0.00 0.00 2.92
3542 3709 7.279758 GCAAGCACTTAGAAGAGTATTTCATCT 59.720 37.037 0.00 0.00 37.59 2.90
3543 3710 9.160496 CAAGCACTTAGAAGAGTATTTCATCTT 57.840 33.333 0.00 0.00 35.58 2.40
3544 3711 9.732130 AAGCACTTAGAAGAGTATTTCATCTTT 57.268 29.630 0.00 0.00 35.58 2.52
3545 3712 9.160496 AGCACTTAGAAGAGTATTTCATCTTTG 57.840 33.333 0.00 0.00 35.58 2.77
3546 3713 9.155975 GCACTTAGAAGAGTATTTCATCTTTGA 57.844 33.333 0.00 0.00 35.58 2.69
3554 3721 9.725019 AAGAGTATTTCATCTTTGATGTGTACA 57.275 29.630 7.33 0.00 31.76 2.90
3555 3722 9.725019 AGAGTATTTCATCTTTGATGTGTACAA 57.275 29.630 0.00 0.00 0.00 2.41
3562 3729 9.681692 TTCATCTTTGATGTGTACAAATTTCAG 57.318 29.630 0.00 0.00 36.79 3.02
3563 3730 9.065798 TCATCTTTGATGTGTACAAATTTCAGA 57.934 29.630 0.00 2.68 36.79 3.27
3564 3731 9.850628 CATCTTTGATGTGTACAAATTTCAGAT 57.149 29.630 0.00 4.79 36.79 2.90
3566 3733 9.897744 TCTTTGATGTGTACAAATTTCAGATTC 57.102 29.630 0.00 0.00 36.79 2.52
3567 3734 9.903682 CTTTGATGTGTACAAATTTCAGATTCT 57.096 29.630 0.00 0.00 36.79 2.40
3609 3776 9.865321 ATTTTATTTGAATCACTGTTCATCTGG 57.135 29.630 0.00 0.00 37.88 3.86
3610 3777 5.909621 ATTTGAATCACTGTTCATCTGGG 57.090 39.130 0.00 0.00 37.88 4.45
3611 3778 4.639078 TTGAATCACTGTTCATCTGGGA 57.361 40.909 0.00 0.00 37.88 4.37
3612 3779 4.212143 TGAATCACTGTTCATCTGGGAG 57.788 45.455 0.00 0.00 33.41 4.30
3613 3780 2.706339 ATCACTGTTCATCTGGGAGC 57.294 50.000 0.00 0.00 31.27 4.70
3614 3781 1.351076 TCACTGTTCATCTGGGAGCA 58.649 50.000 0.00 0.00 0.00 4.26
3615 3782 1.911357 TCACTGTTCATCTGGGAGCAT 59.089 47.619 0.00 0.00 0.00 3.79
3616 3783 3.106827 TCACTGTTCATCTGGGAGCATA 58.893 45.455 0.00 0.00 0.00 3.14
3617 3784 3.713248 TCACTGTTCATCTGGGAGCATAT 59.287 43.478 0.00 0.00 0.00 1.78
3618 3785 4.063689 CACTGTTCATCTGGGAGCATATC 58.936 47.826 0.00 0.00 0.00 1.63
3619 3786 3.713248 ACTGTTCATCTGGGAGCATATCA 59.287 43.478 0.00 0.00 0.00 2.15
3620 3787 4.202336 ACTGTTCATCTGGGAGCATATCAG 60.202 45.833 0.00 0.00 0.00 2.90
3621 3788 3.072944 GTTCATCTGGGAGCATATCAGC 58.927 50.000 0.00 0.00 0.00 4.26
3631 3798 3.865011 AGCATATCAGCTCGGTATCAG 57.135 47.619 0.00 0.00 42.18 2.90
3632 3799 3.425659 AGCATATCAGCTCGGTATCAGA 58.574 45.455 0.00 0.00 42.18 3.27
3633 3800 4.022603 AGCATATCAGCTCGGTATCAGAT 58.977 43.478 0.00 0.00 42.18 2.90
3634 3801 4.465660 AGCATATCAGCTCGGTATCAGATT 59.534 41.667 0.00 0.00 42.18 2.40
3635 3802 5.046735 AGCATATCAGCTCGGTATCAGATTT 60.047 40.000 0.00 0.00 42.18 2.17
3636 3803 5.063186 GCATATCAGCTCGGTATCAGATTTG 59.937 44.000 0.00 0.00 0.00 2.32
3637 3804 3.459232 TCAGCTCGGTATCAGATTTGG 57.541 47.619 0.00 0.00 0.00 3.28
3638 3805 3.031013 TCAGCTCGGTATCAGATTTGGA 58.969 45.455 0.00 0.00 0.00 3.53
3639 3806 3.643320 TCAGCTCGGTATCAGATTTGGAT 59.357 43.478 0.00 0.00 0.00 3.41
3640 3807 4.101585 TCAGCTCGGTATCAGATTTGGATT 59.898 41.667 0.00 0.00 0.00 3.01
3641 3808 4.818546 CAGCTCGGTATCAGATTTGGATTT 59.181 41.667 0.00 0.00 0.00 2.17
3642 3809 5.297776 CAGCTCGGTATCAGATTTGGATTTT 59.702 40.000 0.00 0.00 0.00 1.82
3643 3810 5.529060 AGCTCGGTATCAGATTTGGATTTTC 59.471 40.000 0.00 0.00 0.00 2.29
3644 3811 5.559035 GCTCGGTATCAGATTTGGATTTTCG 60.559 44.000 0.00 0.00 0.00 3.46
3645 3812 4.272504 TCGGTATCAGATTTGGATTTTCGC 59.727 41.667 0.00 0.00 0.00 4.70
3646 3813 4.527564 GGTATCAGATTTGGATTTTCGCG 58.472 43.478 0.00 0.00 0.00 5.87
3647 3814 2.542766 TCAGATTTGGATTTTCGCGC 57.457 45.000 0.00 0.00 0.00 6.86
3648 3815 2.083774 TCAGATTTGGATTTTCGCGCT 58.916 42.857 5.56 0.00 0.00 5.92
3649 3816 2.095853 TCAGATTTGGATTTTCGCGCTC 59.904 45.455 5.56 0.00 0.00 5.03
3650 3817 2.083774 AGATTTGGATTTTCGCGCTCA 58.916 42.857 5.56 0.00 0.00 4.26
3651 3818 2.096496 AGATTTGGATTTTCGCGCTCAG 59.904 45.455 5.56 0.00 0.00 3.35
3652 3819 0.521291 TTTGGATTTTCGCGCTCAGG 59.479 50.000 5.56 0.00 0.00 3.86
3653 3820 1.922135 TTGGATTTTCGCGCTCAGGC 61.922 55.000 5.56 0.00 0.00 4.85
3665 3832 2.422276 GCTCAGGCGACATTTTGTTT 57.578 45.000 0.00 0.00 0.00 2.83
3666 3833 3.552604 GCTCAGGCGACATTTTGTTTA 57.447 42.857 0.00 0.00 0.00 2.01
3667 3834 3.234386 GCTCAGGCGACATTTTGTTTAC 58.766 45.455 0.00 0.00 0.00 2.01
3668 3835 3.058224 GCTCAGGCGACATTTTGTTTACT 60.058 43.478 0.00 0.00 0.00 2.24
3669 3836 4.466828 CTCAGGCGACATTTTGTTTACTG 58.533 43.478 0.00 0.00 0.00 2.74
3670 3837 3.880490 TCAGGCGACATTTTGTTTACTGT 59.120 39.130 0.00 0.00 31.25 3.55
3671 3838 3.974401 CAGGCGACATTTTGTTTACTGTG 59.026 43.478 0.00 0.00 0.00 3.66
3672 3839 3.630312 AGGCGACATTTTGTTTACTGTGT 59.370 39.130 0.00 0.00 0.00 3.72
3673 3840 4.817464 AGGCGACATTTTGTTTACTGTGTA 59.183 37.500 0.00 0.00 0.00 2.90
3674 3841 5.472137 AGGCGACATTTTGTTTACTGTGTAT 59.528 36.000 0.00 0.00 0.00 2.29
3675 3842 6.651643 AGGCGACATTTTGTTTACTGTGTATA 59.348 34.615 0.00 0.00 0.00 1.47
3676 3843 7.335924 AGGCGACATTTTGTTTACTGTGTATAT 59.664 33.333 0.00 0.00 0.00 0.86
3677 3844 7.638683 GGCGACATTTTGTTTACTGTGTATATC 59.361 37.037 0.00 0.00 0.00 1.63
3678 3845 7.638683 GCGACATTTTGTTTACTGTGTATATCC 59.361 37.037 0.00 0.00 0.00 2.59
3679 3846 8.661257 CGACATTTTGTTTACTGTGTATATCCA 58.339 33.333 0.00 0.00 0.00 3.41
3682 3849 9.950680 CATTTTGTTTACTGTGTATATCCATCC 57.049 33.333 0.00 0.00 0.00 3.51
3683 3850 7.780008 TTTGTTTACTGTGTATATCCATCCG 57.220 36.000 0.00 0.00 0.00 4.18
3684 3851 6.474140 TGTTTACTGTGTATATCCATCCGT 57.526 37.500 0.00 0.00 0.00 4.69
3685 3852 6.509656 TGTTTACTGTGTATATCCATCCGTC 58.490 40.000 0.00 0.00 0.00 4.79
3686 3853 6.097129 TGTTTACTGTGTATATCCATCCGTCA 59.903 38.462 0.00 0.00 0.00 4.35
3687 3854 6.718522 TTACTGTGTATATCCATCCGTCAA 57.281 37.500 0.00 0.00 0.00 3.18
3688 3855 5.607939 ACTGTGTATATCCATCCGTCAAA 57.392 39.130 0.00 0.00 0.00 2.69
3689 3856 6.174720 ACTGTGTATATCCATCCGTCAAAT 57.825 37.500 0.00 0.00 0.00 2.32
3690 3857 7.297936 ACTGTGTATATCCATCCGTCAAATA 57.702 36.000 0.00 0.00 0.00 1.40
3691 3858 7.152645 ACTGTGTATATCCATCCGTCAAATAC 58.847 38.462 0.00 0.00 0.00 1.89
3692 3859 7.056844 TGTGTATATCCATCCGTCAAATACA 57.943 36.000 0.00 0.00 0.00 2.29
3693 3860 7.151976 TGTGTATATCCATCCGTCAAATACAG 58.848 38.462 0.00 0.00 31.14 2.74
3694 3861 6.090898 GTGTATATCCATCCGTCAAATACAGC 59.909 42.308 0.00 0.00 31.14 4.40
3695 3862 3.845781 ATCCATCCGTCAAATACAGCT 57.154 42.857 0.00 0.00 0.00 4.24
3696 3863 2.905075 TCCATCCGTCAAATACAGCTG 58.095 47.619 13.48 13.48 0.00 4.24
3697 3864 2.499693 TCCATCCGTCAAATACAGCTGA 59.500 45.455 23.35 4.31 0.00 4.26
3698 3865 3.055458 TCCATCCGTCAAATACAGCTGAA 60.055 43.478 23.35 0.00 0.00 3.02
3699 3866 3.689161 CCATCCGTCAAATACAGCTGAAA 59.311 43.478 23.35 8.48 0.00 2.69
3700 3867 4.155826 CCATCCGTCAAATACAGCTGAAAA 59.844 41.667 23.35 5.62 0.00 2.29
3701 3868 5.335583 CCATCCGTCAAATACAGCTGAAAAA 60.336 40.000 23.35 2.81 0.00 1.94
3702 3869 5.356882 TCCGTCAAATACAGCTGAAAAAG 57.643 39.130 23.35 7.30 0.00 2.27
3703 3870 5.060506 TCCGTCAAATACAGCTGAAAAAGA 58.939 37.500 23.35 9.68 0.00 2.52
3704 3871 5.179368 TCCGTCAAATACAGCTGAAAAAGAG 59.821 40.000 23.35 5.12 0.00 2.85
3705 3872 4.848299 CGTCAAATACAGCTGAAAAAGAGC 59.152 41.667 23.35 3.21 36.65 4.09
3707 3874 6.082984 GTCAAATACAGCTGAAAAAGAGCTC 58.917 40.000 23.35 5.27 45.24 4.09
3708 3875 5.182001 TCAAATACAGCTGAAAAAGAGCTCC 59.818 40.000 23.35 0.00 45.24 4.70
3709 3876 2.645838 ACAGCTGAAAAAGAGCTCCA 57.354 45.000 23.35 0.00 45.24 3.86
3710 3877 2.225467 ACAGCTGAAAAAGAGCTCCAC 58.775 47.619 23.35 0.00 45.24 4.02
3711 3878 2.224606 CAGCTGAAAAAGAGCTCCACA 58.775 47.619 8.42 3.12 45.24 4.17
3712 3879 2.818432 CAGCTGAAAAAGAGCTCCACAT 59.182 45.455 8.42 0.00 45.24 3.21
3713 3880 3.255149 CAGCTGAAAAAGAGCTCCACATT 59.745 43.478 8.42 0.33 45.24 2.71
3714 3881 3.893813 AGCTGAAAAAGAGCTCCACATTT 59.106 39.130 10.93 6.72 43.54 2.32
3715 3882 3.985925 GCTGAAAAAGAGCTCCACATTTG 59.014 43.478 10.93 0.00 33.37 2.32
3716 3883 4.500375 GCTGAAAAAGAGCTCCACATTTGT 60.500 41.667 10.93 0.00 33.37 2.83
3717 3884 4.935702 TGAAAAAGAGCTCCACATTTGTG 58.064 39.130 10.93 3.67 45.23 3.33
3718 3885 4.402155 TGAAAAAGAGCTCCACATTTGTGT 59.598 37.500 10.93 0.00 44.21 3.72
3719 3886 4.574599 AAAAGAGCTCCACATTTGTGTC 57.425 40.909 10.93 1.20 44.21 3.67
3720 3887 2.191128 AGAGCTCCACATTTGTGTCC 57.809 50.000 10.93 0.00 44.21 4.02
3721 3888 1.701847 AGAGCTCCACATTTGTGTCCT 59.298 47.619 10.93 3.02 44.21 3.85
3722 3889 2.107204 AGAGCTCCACATTTGTGTCCTT 59.893 45.455 10.93 0.00 44.21 3.36
3723 3890 2.485814 GAGCTCCACATTTGTGTCCTTC 59.514 50.000 0.87 0.00 44.21 3.46
3724 3891 1.541588 GCTCCACATTTGTGTCCTTCC 59.458 52.381 9.66 0.00 44.21 3.46
3725 3892 2.862541 CTCCACATTTGTGTCCTTCCA 58.137 47.619 9.66 0.00 44.21 3.53
3726 3893 3.424703 CTCCACATTTGTGTCCTTCCAT 58.575 45.455 9.66 0.00 44.21 3.41
3727 3894 3.420893 TCCACATTTGTGTCCTTCCATC 58.579 45.455 9.66 0.00 44.21 3.51
3728 3895 3.074390 TCCACATTTGTGTCCTTCCATCT 59.926 43.478 9.66 0.00 44.21 2.90
3729 3896 3.192001 CCACATTTGTGTCCTTCCATCTG 59.808 47.826 9.66 0.00 44.21 2.90
3730 3897 2.821969 ACATTTGTGTCCTTCCATCTGC 59.178 45.455 0.00 0.00 0.00 4.26
3731 3898 2.957402 TTTGTGTCCTTCCATCTGCT 57.043 45.000 0.00 0.00 0.00 4.24
3732 3899 2.957402 TTGTGTCCTTCCATCTGCTT 57.043 45.000 0.00 0.00 0.00 3.91
3733 3900 2.189594 TGTGTCCTTCCATCTGCTTG 57.810 50.000 0.00 0.00 0.00 4.01
3734 3901 1.421268 TGTGTCCTTCCATCTGCTTGT 59.579 47.619 0.00 0.00 0.00 3.16
3735 3902 2.079925 GTGTCCTTCCATCTGCTTGTC 58.920 52.381 0.00 0.00 0.00 3.18
3736 3903 1.980765 TGTCCTTCCATCTGCTTGTCT 59.019 47.619 0.00 0.00 0.00 3.41
3737 3904 3.055819 GTGTCCTTCCATCTGCTTGTCTA 60.056 47.826 0.00 0.00 0.00 2.59
3738 3905 3.582647 TGTCCTTCCATCTGCTTGTCTAA 59.417 43.478 0.00 0.00 0.00 2.10
3739 3906 4.041567 TGTCCTTCCATCTGCTTGTCTAAA 59.958 41.667 0.00 0.00 0.00 1.85
3740 3907 5.003804 GTCCTTCCATCTGCTTGTCTAAAA 58.996 41.667 0.00 0.00 0.00 1.52
3741 3908 5.473504 GTCCTTCCATCTGCTTGTCTAAAAA 59.526 40.000 0.00 0.00 0.00 1.94
3742 3909 6.151817 GTCCTTCCATCTGCTTGTCTAAAAAT 59.848 38.462 0.00 0.00 0.00 1.82
3743 3910 6.151648 TCCTTCCATCTGCTTGTCTAAAAATG 59.848 38.462 0.00 0.00 0.00 2.32
3744 3911 5.902613 TCCATCTGCTTGTCTAAAAATGG 57.097 39.130 0.00 0.00 34.94 3.16
3745 3912 5.569355 TCCATCTGCTTGTCTAAAAATGGA 58.431 37.500 0.00 0.00 39.18 3.41
3746 3913 5.415701 TCCATCTGCTTGTCTAAAAATGGAC 59.584 40.000 0.00 0.00 37.19 4.02
3747 3914 5.327091 CATCTGCTTGTCTAAAAATGGACG 58.673 41.667 0.00 0.00 35.45 4.79
3748 3915 3.751175 TCTGCTTGTCTAAAAATGGACGG 59.249 43.478 0.00 0.00 35.45 4.79
3749 3916 2.817258 TGCTTGTCTAAAAATGGACGGG 59.183 45.455 0.00 0.00 35.45 5.28
3750 3917 2.817844 GCTTGTCTAAAAATGGACGGGT 59.182 45.455 0.00 0.00 35.45 5.28
3751 3918 3.119955 GCTTGTCTAAAAATGGACGGGTC 60.120 47.826 0.00 0.00 35.45 4.46
3752 3919 3.773418 TGTCTAAAAATGGACGGGTCA 57.227 42.857 0.75 0.00 35.45 4.02
3753 3920 4.088056 TGTCTAAAAATGGACGGGTCAA 57.912 40.909 0.75 0.00 35.45 3.18
3754 3921 4.462133 TGTCTAAAAATGGACGGGTCAAA 58.538 39.130 0.75 0.00 35.45 2.69
3755 3922 5.074115 TGTCTAAAAATGGACGGGTCAAAT 58.926 37.500 0.75 0.00 35.45 2.32
3756 3923 5.536916 TGTCTAAAAATGGACGGGTCAAATT 59.463 36.000 0.75 0.00 35.45 1.82
3757 3924 6.041069 TGTCTAAAAATGGACGGGTCAAATTT 59.959 34.615 0.75 4.00 35.45 1.82
3758 3925 6.926826 GTCTAAAAATGGACGGGTCAAATTTT 59.073 34.615 13.97 13.97 38.19 1.82
3759 3926 8.083462 GTCTAAAAATGGACGGGTCAAATTTTA 58.917 33.333 17.45 13.19 36.88 1.52
3760 3927 8.808092 TCTAAAAATGGACGGGTCAAATTTTAT 58.192 29.630 17.45 12.82 36.88 1.40
3761 3928 9.430623 CTAAAAATGGACGGGTCAAATTTTATT 57.569 29.630 17.45 10.38 36.88 1.40
3762 3929 8.684386 AAAAATGGACGGGTCAAATTTTATTT 57.316 26.923 17.45 6.75 36.88 1.40
3763 3930 7.665561 AAATGGACGGGTCAAATTTTATTTG 57.334 32.000 5.92 5.92 29.01 2.32
3764 3931 4.561105 TGGACGGGTCAAATTTTATTTGC 58.439 39.130 7.16 3.66 0.00 3.68
3765 3932 4.039245 TGGACGGGTCAAATTTTATTTGCA 59.961 37.500 7.16 0.00 0.00 4.08
3766 3933 4.625311 GGACGGGTCAAATTTTATTTGCAG 59.375 41.667 7.16 0.00 0.00 4.41
3767 3934 5.208463 ACGGGTCAAATTTTATTTGCAGT 57.792 34.783 7.16 0.44 0.00 4.40
3768 3935 5.606505 ACGGGTCAAATTTTATTTGCAGTT 58.393 33.333 7.16 0.00 0.00 3.16
3769 3936 6.750148 ACGGGTCAAATTTTATTTGCAGTTA 58.250 32.000 7.16 0.00 0.00 2.24
3770 3937 7.382898 ACGGGTCAAATTTTATTTGCAGTTAT 58.617 30.769 7.16 0.00 0.00 1.89
3771 3938 7.330700 ACGGGTCAAATTTTATTTGCAGTTATG 59.669 33.333 7.16 0.00 0.00 1.90
3772 3939 7.201513 CGGGTCAAATTTTATTTGCAGTTATGG 60.202 37.037 7.16 0.00 0.00 2.74
3773 3940 7.413988 GGGTCAAATTTTATTTGCAGTTATGGC 60.414 37.037 7.16 0.00 0.00 4.40
3774 3941 7.413988 GGTCAAATTTTATTTGCAGTTATGGCC 60.414 37.037 0.00 0.00 0.00 5.36
3775 3942 7.334171 GTCAAATTTTATTTGCAGTTATGGCCT 59.666 33.333 3.32 0.00 0.00 5.19
3776 3943 8.535335 TCAAATTTTATTTGCAGTTATGGCCTA 58.465 29.630 3.32 0.00 0.00 3.93
3777 3944 8.819974 CAAATTTTATTTGCAGTTATGGCCTAG 58.180 33.333 3.32 0.00 0.00 3.02
3778 3945 7.896383 ATTTTATTTGCAGTTATGGCCTAGA 57.104 32.000 3.32 0.00 0.00 2.43
3779 3946 7.710676 TTTTATTTGCAGTTATGGCCTAGAA 57.289 32.000 3.32 0.00 0.00 2.10
3780 3947 7.710676 TTTATTTGCAGTTATGGCCTAGAAA 57.289 32.000 3.32 0.00 0.00 2.52
3781 3948 7.710676 TTATTTGCAGTTATGGCCTAGAAAA 57.289 32.000 3.32 0.00 0.00 2.29
3782 3949 5.643379 TTTGCAGTTATGGCCTAGAAAAG 57.357 39.130 3.32 0.00 0.00 2.27
3783 3950 3.016736 TGCAGTTATGGCCTAGAAAAGC 58.983 45.455 3.32 0.59 0.00 3.51
3784 3951 3.016736 GCAGTTATGGCCTAGAAAAGCA 58.983 45.455 3.32 0.00 0.00 3.91
3785 3952 3.443681 GCAGTTATGGCCTAGAAAAGCAA 59.556 43.478 3.32 0.00 0.00 3.91
3786 3953 4.082245 GCAGTTATGGCCTAGAAAAGCAAA 60.082 41.667 3.32 0.00 0.00 3.68
3787 3954 5.394553 GCAGTTATGGCCTAGAAAAGCAAAT 60.395 40.000 3.32 0.00 0.00 2.32
3788 3955 6.633856 CAGTTATGGCCTAGAAAAGCAAATT 58.366 36.000 3.32 0.00 0.00 1.82
3789 3956 7.630513 GCAGTTATGGCCTAGAAAAGCAAATTA 60.631 37.037 3.32 0.00 0.00 1.40
3790 3957 8.250332 CAGTTATGGCCTAGAAAAGCAAATTAA 58.750 33.333 3.32 0.00 0.00 1.40
3791 3958 8.981659 AGTTATGGCCTAGAAAAGCAAATTAAT 58.018 29.630 3.32 0.00 0.00 1.40
3792 3959 9.249457 GTTATGGCCTAGAAAAGCAAATTAATC 57.751 33.333 3.32 0.00 0.00 1.75
3793 3960 7.666063 ATGGCCTAGAAAAGCAAATTAATCT 57.334 32.000 3.32 0.00 0.00 2.40
3794 3961 7.480760 TGGCCTAGAAAAGCAAATTAATCTT 57.519 32.000 3.32 0.00 0.00 2.40
3795 3962 7.906327 TGGCCTAGAAAAGCAAATTAATCTTT 58.094 30.769 3.32 0.00 0.00 2.52
3796 3963 8.374743 TGGCCTAGAAAAGCAAATTAATCTTTT 58.625 29.630 3.32 11.24 41.20 2.27
3797 3964 9.219603 GGCCTAGAAAAGCAAATTAATCTTTTT 57.780 29.630 12.21 6.77 39.34 1.94
3821 3988 9.612066 TTTAATGTGTCAATAGTGATATGCTCA 57.388 29.630 0.00 0.00 35.80 4.26
3822 3989 9.783081 TTAATGTGTCAATAGTGATATGCTCAT 57.217 29.630 0.00 0.00 35.97 2.90
3823 3990 7.668525 ATGTGTCAATAGTGATATGCTCATG 57.331 36.000 0.00 0.00 35.97 3.07
3824 3991 6.585416 TGTGTCAATAGTGATATGCTCATGT 58.415 36.000 0.00 0.00 35.97 3.21
3825 3992 6.480981 TGTGTCAATAGTGATATGCTCATGTG 59.519 38.462 0.00 0.00 35.97 3.21
3826 3993 6.703165 GTGTCAATAGTGATATGCTCATGTGA 59.297 38.462 0.00 0.00 35.97 3.58
3827 3994 7.387122 GTGTCAATAGTGATATGCTCATGTGAT 59.613 37.037 0.00 0.00 35.97 3.06
3828 3995 7.601508 TGTCAATAGTGATATGCTCATGTGATC 59.398 37.037 0.00 0.00 35.97 2.92
3829 3996 7.601508 GTCAATAGTGATATGCTCATGTGATCA 59.398 37.037 0.00 0.00 35.97 2.92
3830 3997 7.601508 TCAATAGTGATATGCTCATGTGATCAC 59.398 37.037 19.27 19.27 44.34 3.06
3833 4000 6.947903 GTGATATGCTCATGTGATCACTAG 57.052 41.667 25.55 19.54 41.96 2.57
3834 4001 6.685657 GTGATATGCTCATGTGATCACTAGA 58.314 40.000 25.55 20.35 41.96 2.43
3835 4002 7.321908 GTGATATGCTCATGTGATCACTAGAT 58.678 38.462 25.55 9.23 41.96 1.98
3836 4003 7.818446 GTGATATGCTCATGTGATCACTAGATT 59.182 37.037 25.55 12.99 41.96 2.40
3837 4004 7.817962 TGATATGCTCATGTGATCACTAGATTG 59.182 37.037 25.55 14.75 33.72 2.67
3838 4005 5.603170 TGCTCATGTGATCACTAGATTGA 57.397 39.130 25.55 17.52 33.72 2.57
3839 4006 6.170846 TGCTCATGTGATCACTAGATTGAT 57.829 37.500 25.55 7.06 39.02 2.57
3840 4007 5.989777 TGCTCATGTGATCACTAGATTGATG 59.010 40.000 25.55 17.92 36.30 3.07
3841 4008 5.990386 GCTCATGTGATCACTAGATTGATGT 59.010 40.000 25.55 0.00 36.30 3.06
3842 4009 6.073711 GCTCATGTGATCACTAGATTGATGTG 60.074 42.308 25.55 18.42 36.30 3.21
3843 4010 6.881570 TCATGTGATCACTAGATTGATGTGT 58.118 36.000 25.55 0.00 36.30 3.72
3844 4011 6.982724 TCATGTGATCACTAGATTGATGTGTC 59.017 38.462 25.55 0.00 36.30 3.67
3845 4012 6.284891 TGTGATCACTAGATTGATGTGTCA 57.715 37.500 25.55 0.00 36.30 3.58
3846 4013 6.881570 TGTGATCACTAGATTGATGTGTCAT 58.118 36.000 25.55 0.00 36.30 3.06
3847 4014 7.333323 TGTGATCACTAGATTGATGTGTCATT 58.667 34.615 25.55 0.00 36.30 2.57
3848 4015 7.825761 TGTGATCACTAGATTGATGTGTCATTT 59.174 33.333 25.55 0.00 36.30 2.32
3849 4016 9.317936 GTGATCACTAGATTGATGTGTCATTTA 57.682 33.333 18.83 0.00 36.30 1.40
3850 4017 9.317936 TGATCACTAGATTGATGTGTCATTTAC 57.682 33.333 0.00 0.00 36.30 2.01
3851 4018 7.755582 TCACTAGATTGATGTGTCATTTACG 57.244 36.000 0.00 0.00 33.56 3.18
3852 4019 7.543756 TCACTAGATTGATGTGTCATTTACGA 58.456 34.615 0.00 0.00 33.56 3.43
3853 4020 7.488150 TCACTAGATTGATGTGTCATTTACGAC 59.512 37.037 0.00 0.00 33.56 4.34
3854 4021 7.275560 CACTAGATTGATGTGTCATTTACGACA 59.724 37.037 0.00 0.00 43.54 4.35
3855 4022 7.817478 ACTAGATTGATGTGTCATTTACGACAA 59.183 33.333 0.00 0.00 46.99 3.18
3856 4023 7.433708 AGATTGATGTGTCATTTACGACAAA 57.566 32.000 0.00 0.00 46.99 2.83
3857 4024 8.044060 AGATTGATGTGTCATTTACGACAAAT 57.956 30.769 0.00 0.00 46.99 2.32
3858 4025 8.514594 AGATTGATGTGTCATTTACGACAAATT 58.485 29.630 0.00 0.00 46.99 1.82
3859 4026 7.850268 TTGATGTGTCATTTACGACAAATTG 57.150 32.000 0.00 0.00 46.99 2.32
3860 4027 7.195839 TGATGTGTCATTTACGACAAATTGA 57.804 32.000 0.00 0.00 46.99 2.57
3861 4028 7.075121 TGATGTGTCATTTACGACAAATTGAC 58.925 34.615 0.00 13.13 46.99 3.18
3862 4029 6.612247 TGTGTCATTTACGACAAATTGACT 57.388 33.333 0.00 0.00 46.99 3.41
3863 4030 6.426327 TGTGTCATTTACGACAAATTGACTG 58.574 36.000 0.00 0.00 46.99 3.51
3864 4031 6.037720 TGTGTCATTTACGACAAATTGACTGT 59.962 34.615 0.00 0.00 46.99 3.55
3865 4032 7.224949 TGTGTCATTTACGACAAATTGACTGTA 59.775 33.333 0.00 0.00 46.99 2.74
3866 4033 7.740346 GTGTCATTTACGACAAATTGACTGTAG 59.260 37.037 0.00 0.00 46.99 2.74
3867 4034 7.439955 TGTCATTTACGACAAATTGACTGTAGT 59.560 33.333 0.00 1.10 42.82 2.73
3868 4035 8.918658 GTCATTTACGACAAATTGACTGTAGTA 58.081 33.333 0.00 0.00 37.04 1.82
3869 4036 9.478768 TCATTTACGACAAATTGACTGTAGTAA 57.521 29.630 0.00 9.19 40.69 2.24
3874 4041 7.906160 ACGACAAATTGACTGTAGTAATATGC 58.094 34.615 0.00 0.00 31.84 3.14
3875 4042 7.057402 CGACAAATTGACTGTAGTAATATGCG 58.943 38.462 0.00 0.00 0.00 4.73
3876 4043 7.253983 CGACAAATTGACTGTAGTAATATGCGT 60.254 37.037 0.00 0.00 0.00 5.24
3877 4044 8.936070 ACAAATTGACTGTAGTAATATGCGTA 57.064 30.769 0.00 0.00 0.00 4.42
3878 4045 9.031360 ACAAATTGACTGTAGTAATATGCGTAG 57.969 33.333 0.00 0.00 0.00 3.51
3879 4046 9.031360 CAAATTGACTGTAGTAATATGCGTAGT 57.969 33.333 0.00 0.00 0.00 2.73
3880 4047 9.595823 AAATTGACTGTAGTAATATGCGTAGTT 57.404 29.630 0.00 0.00 0.00 2.24
3881 4048 9.595823 AATTGACTGTAGTAATATGCGTAGTTT 57.404 29.630 0.00 0.00 0.00 2.66
3882 4049 8.991243 TTGACTGTAGTAATATGCGTAGTTTT 57.009 30.769 0.00 0.00 0.00 2.43
3883 4050 8.991243 TGACTGTAGTAATATGCGTAGTTTTT 57.009 30.769 0.00 0.00 0.00 1.94
3884 4051 9.079833 TGACTGTAGTAATATGCGTAGTTTTTC 57.920 33.333 0.00 0.00 0.00 2.29
3885 4052 8.416485 ACTGTAGTAATATGCGTAGTTTTTCC 57.584 34.615 0.00 0.00 0.00 3.13
3886 4053 7.493645 ACTGTAGTAATATGCGTAGTTTTTCCC 59.506 37.037 0.00 0.00 0.00 3.97
3887 4054 7.558604 TGTAGTAATATGCGTAGTTTTTCCCT 58.441 34.615 0.00 0.00 0.00 4.20
3888 4055 7.707893 TGTAGTAATATGCGTAGTTTTTCCCTC 59.292 37.037 0.00 0.00 0.00 4.30
3889 4056 6.885922 AGTAATATGCGTAGTTTTTCCCTCT 58.114 36.000 0.00 0.00 0.00 3.69
3890 4057 6.985059 AGTAATATGCGTAGTTTTTCCCTCTC 59.015 38.462 0.00 0.00 0.00 3.20
3891 4058 3.983044 ATGCGTAGTTTTTCCCTCTCT 57.017 42.857 0.00 0.00 0.00 3.10
3892 4059 3.040147 TGCGTAGTTTTTCCCTCTCTG 57.960 47.619 0.00 0.00 0.00 3.35
3893 4060 2.289444 TGCGTAGTTTTTCCCTCTCTGG 60.289 50.000 0.00 0.00 0.00 3.86
3894 4061 2.028385 GCGTAGTTTTTCCCTCTCTGGA 60.028 50.000 0.00 0.00 38.35 3.86
3895 4062 3.851098 CGTAGTTTTTCCCTCTCTGGAG 58.149 50.000 0.00 0.00 38.35 3.86
3906 4073 3.761311 CTCTCTGGAGGTACGTACAAC 57.239 52.381 26.02 17.92 36.03 3.32
3907 4074 3.079578 CTCTCTGGAGGTACGTACAACA 58.920 50.000 26.02 18.83 36.03 3.33
3908 4075 3.693807 TCTCTGGAGGTACGTACAACAT 58.306 45.455 26.02 9.56 0.00 2.71
3909 4076 3.693085 TCTCTGGAGGTACGTACAACATC 59.307 47.826 26.02 16.77 0.00 3.06
3910 4077 3.423749 TCTGGAGGTACGTACAACATCA 58.576 45.455 26.02 14.75 29.44 3.07
3911 4078 4.021229 TCTGGAGGTACGTACAACATCAT 58.979 43.478 26.02 3.73 29.44 2.45
3912 4079 4.097437 TCTGGAGGTACGTACAACATCATC 59.903 45.833 26.02 11.55 29.44 2.92
3913 4080 3.181494 TGGAGGTACGTACAACATCATCG 60.181 47.826 26.02 0.00 29.44 3.84
3914 4081 3.181493 GGAGGTACGTACAACATCATCGT 60.181 47.826 26.02 0.00 38.30 3.73
3915 4082 4.025015 AGGTACGTACAACATCATCGTC 57.975 45.455 26.02 5.20 36.24 4.20
3916 4083 3.441222 AGGTACGTACAACATCATCGTCA 59.559 43.478 26.02 0.00 36.24 4.35
3917 4084 4.082625 AGGTACGTACAACATCATCGTCAA 60.083 41.667 26.02 0.00 36.24 3.18
3918 4085 4.264614 GGTACGTACAACATCATCGTCAAG 59.735 45.833 26.02 0.00 36.24 3.02
3919 4086 4.168922 ACGTACAACATCATCGTCAAGA 57.831 40.909 0.00 0.00 0.00 3.02
3920 4087 4.166523 ACGTACAACATCATCGTCAAGAG 58.833 43.478 0.00 0.00 0.00 2.85
3921 4088 4.082949 ACGTACAACATCATCGTCAAGAGA 60.083 41.667 0.00 0.00 0.00 3.10
3922 4089 4.263209 CGTACAACATCATCGTCAAGAGAC 59.737 45.833 0.00 0.00 41.46 3.36
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
13 14 4.090090 AGCTCCACACTGACAGTAATAGT 58.910 43.478 8.02 0.00 0.00 2.12
21 22 1.069204 GACAAGAGCTCCACACTGACA 59.931 52.381 10.93 0.00 0.00 3.58
27 28 2.343758 GGCGACAAGAGCTCCACA 59.656 61.111 10.93 0.00 34.52 4.17
49 50 1.540707 TGATAGCACACGGTAACACGA 59.459 47.619 0.00 0.00 37.61 4.35
54 55 4.739587 TTGGTATGATAGCACACGGTAA 57.260 40.909 3.50 0.00 35.67 2.85
90 91 6.569179 ATTAACTCGTTTACAACAGCCAAT 57.431 33.333 0.00 0.00 0.00 3.16
156 161 2.706339 AGATTTGCTTGATCCTCGCT 57.294 45.000 0.00 0.00 0.00 4.93
242 247 5.925509 ACCGTGCAATTTAGGATATGTACT 58.074 37.500 0.00 0.00 0.00 2.73
243 248 6.613755 AACCGTGCAATTTAGGATATGTAC 57.386 37.500 0.00 0.00 0.00 2.90
263 268 6.909550 TTGGGCATATACCATCATTTAACC 57.090 37.500 0.00 0.00 37.93 2.85
265 270 8.546083 AAGTTTGGGCATATACCATCATTTAA 57.454 30.769 0.00 0.00 37.93 1.52
272 277 5.594317 GTCAGAAAGTTTGGGCATATACCAT 59.406 40.000 0.00 0.00 37.93 3.55
371 459 1.204146 TTTGAGAGGGGAAGATCGGG 58.796 55.000 0.00 0.00 0.00 5.14
372 460 3.274288 CTTTTTGAGAGGGGAAGATCGG 58.726 50.000 0.00 0.00 0.00 4.18
434 522 8.630037 CAACTAAAAATTCAGTAGGAAGTTGGT 58.370 33.333 0.00 0.00 42.51 3.67
579 667 6.594159 GGTTGGCCTATACATATCATACACAC 59.406 42.308 3.32 0.00 0.00 3.82
611 699 3.128589 ACAATTGATCGGGACAAAATCGG 59.871 43.478 13.59 0.00 0.00 4.18
613 701 5.708948 TCAACAATTGATCGGGACAAAATC 58.291 37.500 13.59 0.00 34.08 2.17
628 716 5.813672 GCAGATAATTGCACCATCAACAATT 59.186 36.000 5.62 5.62 44.09 2.32
651 739 5.586243 TCAAGATATAAAGTGCTCCAGTTGC 59.414 40.000 0.00 0.00 0.00 4.17
655 743 5.592054 TCGTCAAGATATAAAGTGCTCCAG 58.408 41.667 0.00 0.00 0.00 3.86
710 798 7.671302 ACTATATGGGTAGCATGTCTAGTTTG 58.329 38.462 0.00 0.00 0.00 2.93
789 883 2.946990 TCAATGTACCGAGAGCGATACA 59.053 45.455 0.00 0.00 40.82 2.29
804 898 6.089820 CGCAAAGCTATCAATGTTTTCAATGT 59.910 34.615 0.00 0.00 32.96 2.71
831 925 4.339872 TGGCTTTGCATCACTTTCAATT 57.660 36.364 0.00 0.00 0.00 2.32
840 934 1.969208 TCCATTGTTGGCTTTGCATCA 59.031 42.857 0.00 0.00 43.29 3.07
869 963 0.179094 AGGTTCACGTCTTTGTCGCA 60.179 50.000 0.00 0.00 0.00 5.10
915 1009 3.884350 CCAAGAGCGCGCATGCAT 61.884 61.111 35.10 12.64 42.97 3.96
927 1021 0.474854 TAGGGAAGCCACCACCAAGA 60.475 55.000 0.00 0.00 0.00 3.02
936 1030 6.500400 TGAGCTATGTATTTATAGGGAAGCCA 59.500 38.462 0.00 0.00 32.47 4.75
969 1063 2.030185 TCAAGCTCAGTGTACGTCCTTC 60.030 50.000 0.00 0.00 0.00 3.46
987 1081 2.846206 ACTACCCATCTTGATGCCTCAA 59.154 45.455 4.29 4.29 39.07 3.02
1030 1124 2.355363 CGCCAACGTCACGAAGGA 60.355 61.111 2.91 0.00 33.53 3.36
1107 1201 1.073125 TCGCCAAAGGTGAAGATGGAA 59.927 47.619 0.00 0.00 39.45 3.53
1117 1211 0.250338 GTGAAGGAGTCGCCAAAGGT 60.250 55.000 0.00 0.00 40.02 3.50
1297 1391 1.455217 GCAGGGAGGGACGCTACTA 60.455 63.158 1.20 0.00 39.79 1.82
1304 1398 3.452627 CACATATATAGGCAGGGAGGGAC 59.547 52.174 0.00 0.00 0.00 4.46
1342 1436 4.023365 GCCTTGAGCTGGAAATCATATGTC 60.023 45.833 1.90 0.00 38.99 3.06
1343 1437 3.887716 GCCTTGAGCTGGAAATCATATGT 59.112 43.478 1.90 0.00 38.99 2.29
1344 1438 3.255149 GGCCTTGAGCTGGAAATCATATG 59.745 47.826 0.00 0.00 43.05 1.78
1345 1439 3.139770 AGGCCTTGAGCTGGAAATCATAT 59.860 43.478 0.00 0.00 43.05 1.78
1346 1440 2.511218 AGGCCTTGAGCTGGAAATCATA 59.489 45.455 0.00 0.00 43.05 2.15
1347 1441 1.287146 AGGCCTTGAGCTGGAAATCAT 59.713 47.619 0.00 0.00 43.05 2.45
1348 1442 0.700564 AGGCCTTGAGCTGGAAATCA 59.299 50.000 0.00 0.00 43.05 2.57
1349 1443 2.570135 CTAGGCCTTGAGCTGGAAATC 58.430 52.381 12.58 0.00 43.05 2.17
1350 1444 1.213926 CCTAGGCCTTGAGCTGGAAAT 59.786 52.381 12.58 0.00 43.05 2.17
1351 1445 0.620556 CCTAGGCCTTGAGCTGGAAA 59.379 55.000 12.58 0.00 43.05 3.13
1352 1446 1.915078 GCCTAGGCCTTGAGCTGGAA 61.915 60.000 24.19 0.00 43.05 3.53
1353 1447 2.370445 GCCTAGGCCTTGAGCTGGA 61.370 63.158 24.19 0.00 43.05 3.86
1354 1448 1.919600 AAGCCTAGGCCTTGAGCTGG 61.920 60.000 30.42 13.05 43.17 4.85
1355 1449 0.747283 CAAGCCTAGGCCTTGAGCTG 60.747 60.000 30.42 11.96 43.17 4.24
1356 1450 1.606531 CAAGCCTAGGCCTTGAGCT 59.393 57.895 30.42 17.06 43.17 4.09
1357 1451 2.117779 GCAAGCCTAGGCCTTGAGC 61.118 63.158 32.56 24.66 43.17 4.26
1358 1452 1.452833 GGCAAGCCTAGGCCTTGAG 60.453 63.158 32.56 20.61 46.74 3.02
1359 1453 2.677228 GGCAAGCCTAGGCCTTGA 59.323 61.111 32.56 0.00 46.74 3.02
1389 1502 0.907704 TCCCCTTGTGCGACAGGTAT 60.908 55.000 0.00 0.00 0.00 2.73
1398 1511 1.676967 CTGGAAGCTCCCCTTGTGC 60.677 63.158 6.66 0.00 35.03 4.57
1499 1612 1.843421 CTGGTGTTGAGGGGGAACA 59.157 57.895 0.00 0.00 0.00 3.18
1582 1695 8.428536 CGCTGTGTGAAGCTAAGTAAATATATC 58.571 37.037 0.00 0.00 41.24 1.63
1588 1703 3.064207 CCGCTGTGTGAAGCTAAGTAAA 58.936 45.455 0.00 0.00 41.24 2.01
1639 1754 2.857489 GCAGCCGTTATGTAGTACTCCG 60.857 54.545 0.00 0.00 0.00 4.63
1641 1756 2.100252 TGGCAGCCGTTATGTAGTACTC 59.900 50.000 7.03 0.00 0.00 2.59
1642 1757 2.104967 TGGCAGCCGTTATGTAGTACT 58.895 47.619 7.03 0.00 0.00 2.73
1643 1758 2.199236 GTGGCAGCCGTTATGTAGTAC 58.801 52.381 7.03 0.00 0.00 2.73
1644 1759 1.137479 GGTGGCAGCCGTTATGTAGTA 59.863 52.381 7.03 0.00 0.00 1.82
1645 1760 0.107848 GGTGGCAGCCGTTATGTAGT 60.108 55.000 7.03 0.00 0.00 2.73
1646 1761 0.814010 GGGTGGCAGCCGTTATGTAG 60.814 60.000 21.35 0.00 0.00 2.74
1647 1762 1.222387 GGGTGGCAGCCGTTATGTA 59.778 57.895 21.35 0.00 0.00 2.29
1648 1763 2.045340 GGGTGGCAGCCGTTATGT 60.045 61.111 21.35 0.00 0.00 2.29
1670 1785 1.602771 GCCTGGGGTAGTTCTCCAC 59.397 63.158 0.00 0.00 42.62 4.02
1681 1825 2.445492 AATCCAACACTGGCCTGGGG 62.445 60.000 17.16 10.63 43.17 4.96
1684 1828 1.542915 CTTGAATCCAACACTGGCCTG 59.457 52.381 8.29 8.29 43.17 4.85
1692 1836 7.576403 TCATCCATAAGATCTTGAATCCAACA 58.424 34.615 18.47 0.00 30.59 3.33
1704 1848 9.208022 TCACGTTTGATATTCATCCATAAGATC 57.792 33.333 0.00 0.00 30.59 2.75
1816 1968 7.587037 AACCCACAATCCAACTCATTATATG 57.413 36.000 0.00 0.00 0.00 1.78
1837 1989 3.936453 TCATTACCATGCGTACTCAAACC 59.064 43.478 0.00 0.00 0.00 3.27
1848 2000 7.201644 CGGTTGGAAGATATATCATTACCATGC 60.202 40.741 15.08 11.95 0.00 4.06
1888 2041 1.064946 CAACGCTGTCCCGCAAAAA 59.935 52.632 0.00 0.00 0.00 1.94
1889 2042 0.814410 TACAACGCTGTCCCGCAAAA 60.814 50.000 0.00 0.00 36.96 2.44
1890 2043 1.227586 TACAACGCTGTCCCGCAAA 60.228 52.632 0.00 0.00 36.96 3.68
1891 2044 1.957186 GTACAACGCTGTCCCGCAA 60.957 57.895 0.00 0.00 36.96 4.85
1892 2045 2.356553 GTACAACGCTGTCCCGCA 60.357 61.111 0.00 0.00 36.96 5.69
1893 2046 3.116531 GGTACAACGCTGTCCCGC 61.117 66.667 0.00 0.00 36.96 6.13
1894 2047 2.340809 TGGTACAACGCTGTCCCG 59.659 61.111 0.00 0.00 34.27 5.14
1901 2054 9.737702 TCAAGTGTTTGGTTAATGGTACAACGC 62.738 40.741 0.00 0.00 37.02 4.84
1902 2055 6.458478 TCAAGTGTTTGGTTAATGGTACAACG 60.458 38.462 0.00 0.00 37.02 4.10
1903 2056 6.797454 TCAAGTGTTTGGTTAATGGTACAAC 58.203 36.000 0.00 0.00 37.02 3.32
1904 2057 7.429633 CATCAAGTGTTTGGTTAATGGTACAA 58.570 34.615 0.00 0.00 37.02 2.41
1907 2060 5.335269 CGCATCAAGTGTTTGGTTAATGGTA 60.335 40.000 0.00 0.00 34.97 3.25
1930 2084 7.304919 TCTCCTCTTAGATTATATGTACGCG 57.695 40.000 3.53 3.53 0.00 6.01
1945 2099 4.256920 GCAGTGAAGCATTTCTCCTCTTA 58.743 43.478 0.00 0.00 34.31 2.10
1992 2146 1.300697 ACCCACGAAGAACAGCGAC 60.301 57.895 0.00 0.00 0.00 5.19
1998 2152 1.602377 CCAAACTCACCCACGAAGAAC 59.398 52.381 0.00 0.00 0.00 3.01
2145 2299 1.021968 AAAAACAGCCGGAGTGACAC 58.978 50.000 5.05 0.00 0.00 3.67
2164 2318 2.959507 ACATGCATGTACGCTGACTA 57.040 45.000 30.50 0.00 39.68 2.59
2222 2376 0.960364 GAGTTTTCGCCCCATGCTCA 60.960 55.000 0.00 0.00 38.05 4.26
2237 2391 1.913762 CCCAGGGACGACCAGAGTT 60.914 63.158 0.00 0.00 43.89 3.01
2288 2442 1.153349 GGCATCCTCGAAGGTGACC 60.153 63.158 0.00 0.00 36.53 4.02
2394 2548 2.816958 CGCACGCAGCTTCTGGAT 60.817 61.111 0.00 0.00 42.61 3.41
2507 2661 7.912250 GCACTTCCAACAATGAAGAACATATAG 59.088 37.037 6.99 0.00 41.38 1.31
2549 2703 3.536956 TGTCTGGACAAAACTCGAAGT 57.463 42.857 0.51 0.00 38.56 3.01
2566 2720 7.331440 TGAATTCAAAATGGTGTGCAATATGTC 59.669 33.333 5.45 0.00 0.00 3.06
2604 2758 7.318141 ACGAATCAAGATTTGCATCAAGATTT 58.682 30.769 9.44 0.00 36.27 2.17
2612 2766 6.515272 AACCTTACGAATCAAGATTTGCAT 57.485 33.333 9.44 0.00 35.98 3.96
2665 2822 5.106555 CCGCATAACTGAACTCATCAACTTT 60.107 40.000 0.00 0.00 37.67 2.66
2793 2950 2.181021 GACGGATCCTCGCACGTT 59.819 61.111 10.75 0.00 39.95 3.99
2884 3041 1.169034 GGCAGGCTGCTTACTATGGC 61.169 60.000 35.73 14.53 44.28 4.40
2923 3080 0.528017 TTCAGACGTAGGCAGCTCAG 59.472 55.000 0.00 0.00 0.00 3.35
2947 3104 3.133691 CCGTGTCCATGATTCCATGTAG 58.866 50.000 0.00 0.00 46.68 2.74
3127 3284 8.634444 ACTGCTGAGATATCGTAATTTTAGACT 58.366 33.333 0.00 0.00 0.00 3.24
3139 3296 5.181056 ACACATCTCTACTGCTGAGATATCG 59.819 44.000 11.07 6.90 46.07 2.92
3174 3331 2.503765 TCAAATTCTCGATGGGGTGCTA 59.496 45.455 0.00 0.00 0.00 3.49
3180 3337 4.408182 AGTAGGTCAAATTCTCGATGGG 57.592 45.455 0.00 0.00 0.00 4.00
3193 3353 2.028112 GTGATGCAGTCCAAGTAGGTCA 60.028 50.000 0.00 0.00 39.02 4.02
3207 3367 5.756347 ACTTACTAAAAAGTGTCGTGATGCA 59.244 36.000 0.00 0.00 38.28 3.96
3229 3389 4.387862 CGGTAAAACATCTAAACTCGCACT 59.612 41.667 0.00 0.00 0.00 4.40
3344 3511 1.297893 GACAAATCTGCATCGGCGC 60.298 57.895 0.00 0.00 45.35 6.53
3351 3518 3.635836 TCAATGGTTGTGACAAATCTGCA 59.364 39.130 0.00 0.00 0.00 4.41
3382 3549 7.763172 AGATTAGAATTGCTATATGCTACGC 57.237 36.000 0.00 0.00 43.37 4.42
3453 3620 3.444703 AACAAACAAGCCGTGCATTTA 57.555 38.095 0.00 0.00 0.00 1.40
3473 3640 2.371841 TCTGAGGAGCTGGCTACAAAAA 59.628 45.455 7.60 0.00 0.00 1.94
3474 3641 1.977854 TCTGAGGAGCTGGCTACAAAA 59.022 47.619 7.60 0.00 0.00 2.44
3475 3642 1.644509 TCTGAGGAGCTGGCTACAAA 58.355 50.000 7.60 0.00 0.00 2.83
3476 3643 1.483827 CATCTGAGGAGCTGGCTACAA 59.516 52.381 7.60 0.00 0.00 2.41
3477 3644 1.117994 CATCTGAGGAGCTGGCTACA 58.882 55.000 7.60 2.72 0.00 2.74
3478 3645 1.068434 GACATCTGAGGAGCTGGCTAC 59.932 57.143 0.00 0.00 0.00 3.58
3479 3646 1.342374 TGACATCTGAGGAGCTGGCTA 60.342 52.381 0.00 0.00 0.00 3.93
3480 3647 0.616964 TGACATCTGAGGAGCTGGCT 60.617 55.000 0.00 0.00 0.00 4.75
3481 3648 0.469070 ATGACATCTGAGGAGCTGGC 59.531 55.000 0.00 0.00 0.00 4.85
3482 3649 3.204526 GAAATGACATCTGAGGAGCTGG 58.795 50.000 0.00 0.00 0.00 4.85
3483 3650 3.870274 TGAAATGACATCTGAGGAGCTG 58.130 45.455 0.00 0.00 0.00 4.24
3484 3651 3.518705 ACTGAAATGACATCTGAGGAGCT 59.481 43.478 0.00 0.00 0.00 4.09
3485 3652 3.622163 CACTGAAATGACATCTGAGGAGC 59.378 47.826 0.00 0.00 0.00 4.70
3486 3653 3.622163 GCACTGAAATGACATCTGAGGAG 59.378 47.826 0.00 0.00 0.00 3.69
3487 3654 3.603532 GCACTGAAATGACATCTGAGGA 58.396 45.455 0.00 0.00 0.00 3.71
3488 3655 2.350804 CGCACTGAAATGACATCTGAGG 59.649 50.000 0.00 0.00 0.00 3.86
3489 3656 3.256558 TCGCACTGAAATGACATCTGAG 58.743 45.455 0.00 0.00 0.00 3.35
3490 3657 3.317603 TCGCACTGAAATGACATCTGA 57.682 42.857 0.00 0.00 0.00 3.27
3491 3658 4.408993 TTTCGCACTGAAATGACATCTG 57.591 40.909 0.00 0.00 41.59 2.90
3492 3659 5.396484 CATTTTCGCACTGAAATGACATCT 58.604 37.500 3.40 0.00 45.62 2.90
3493 3660 4.560035 CCATTTTCGCACTGAAATGACATC 59.440 41.667 9.64 0.00 45.62 3.06
3494 3661 4.487948 CCATTTTCGCACTGAAATGACAT 58.512 39.130 9.64 0.00 45.62 3.06
3495 3662 3.856638 GCCATTTTCGCACTGAAATGACA 60.857 43.478 9.64 0.00 45.62 3.58
3496 3663 2.663119 GCCATTTTCGCACTGAAATGAC 59.337 45.455 9.64 0.00 45.62 3.06
3497 3664 2.295629 TGCCATTTTCGCACTGAAATGA 59.704 40.909 9.64 0.00 45.62 2.57
3498 3665 2.674954 TGCCATTTTCGCACTGAAATG 58.325 42.857 0.00 0.00 45.62 2.32
3499 3666 3.319755 CTTGCCATTTTCGCACTGAAAT 58.680 40.909 0.00 0.00 45.62 2.17
3500 3667 2.741612 CTTGCCATTTTCGCACTGAAA 58.258 42.857 0.00 0.00 44.70 2.69
3501 3668 1.602668 GCTTGCCATTTTCGCACTGAA 60.603 47.619 0.00 0.00 35.56 3.02
3502 3669 0.039256 GCTTGCCATTTTCGCACTGA 60.039 50.000 0.00 0.00 35.56 3.41
3503 3670 0.318869 TGCTTGCCATTTTCGCACTG 60.319 50.000 0.00 0.00 35.56 3.66
3504 3671 0.318955 GTGCTTGCCATTTTCGCACT 60.319 50.000 5.54 0.00 45.39 4.40
3505 3672 2.144362 GTGCTTGCCATTTTCGCAC 58.856 52.632 0.00 0.00 43.22 5.34
3506 3673 0.388659 AAGTGCTTGCCATTTTCGCA 59.611 45.000 0.00 0.00 0.00 5.10
3507 3674 2.095263 TCTAAGTGCTTGCCATTTTCGC 60.095 45.455 0.00 0.00 0.00 4.70
3508 3675 3.829886 TCTAAGTGCTTGCCATTTTCG 57.170 42.857 0.00 0.00 0.00 3.46
3509 3676 5.048434 ACTCTTCTAAGTGCTTGCCATTTTC 60.048 40.000 0.00 0.00 0.00 2.29
3510 3677 4.829492 ACTCTTCTAAGTGCTTGCCATTTT 59.171 37.500 0.00 0.00 0.00 1.82
3511 3678 4.401925 ACTCTTCTAAGTGCTTGCCATTT 58.598 39.130 0.00 0.00 0.00 2.32
3512 3679 4.026356 ACTCTTCTAAGTGCTTGCCATT 57.974 40.909 0.00 0.00 0.00 3.16
3513 3680 3.710209 ACTCTTCTAAGTGCTTGCCAT 57.290 42.857 0.00 0.00 0.00 4.40
3514 3681 4.826274 ATACTCTTCTAAGTGCTTGCCA 57.174 40.909 0.00 0.00 0.00 4.92
3515 3682 5.643777 TGAAATACTCTTCTAAGTGCTTGCC 59.356 40.000 0.00 0.00 0.00 4.52
3516 3683 6.727824 TGAAATACTCTTCTAAGTGCTTGC 57.272 37.500 0.00 0.00 0.00 4.01
3517 3684 8.715191 AGATGAAATACTCTTCTAAGTGCTTG 57.285 34.615 0.00 0.00 36.92 4.01
3518 3685 9.732130 AAAGATGAAATACTCTTCTAAGTGCTT 57.268 29.630 0.00 0.00 37.53 3.91
3519 3686 9.160496 CAAAGATGAAATACTCTTCTAAGTGCT 57.840 33.333 0.00 0.00 37.53 4.40
3520 3687 9.155975 TCAAAGATGAAATACTCTTCTAAGTGC 57.844 33.333 0.00 0.00 37.53 4.40
3528 3695 9.725019 TGTACACATCAAAGATGAAATACTCTT 57.275 29.630 13.46 0.00 39.49 2.85
3529 3696 9.725019 TTGTACACATCAAAGATGAAATACTCT 57.275 29.630 13.46 0.00 39.49 3.24
3536 3703 9.681692 CTGAAATTTGTACACATCAAAGATGAA 57.318 29.630 13.46 0.00 39.49 2.57
3537 3704 9.065798 TCTGAAATTTGTACACATCAAAGATGA 57.934 29.630 13.46 0.00 38.02 2.92
3538 3705 9.850628 ATCTGAAATTTGTACACATCAAAGATG 57.149 29.630 0.00 5.50 38.02 2.90
3540 3707 9.897744 GAATCTGAAATTTGTACACATCAAAGA 57.102 29.630 0.00 0.00 38.02 2.52
3541 3708 9.903682 AGAATCTGAAATTTGTACACATCAAAG 57.096 29.630 0.00 0.00 38.02 2.77
3583 3750 9.865321 CCAGATGAACAGTGATTCAAATAAAAT 57.135 29.630 0.00 0.00 41.78 1.82
3584 3751 8.306038 CCCAGATGAACAGTGATTCAAATAAAA 58.694 33.333 0.00 0.00 41.78 1.52
3585 3752 7.669304 TCCCAGATGAACAGTGATTCAAATAAA 59.331 33.333 0.00 0.00 41.78 1.40
3586 3753 7.174413 TCCCAGATGAACAGTGATTCAAATAA 58.826 34.615 0.00 0.00 41.78 1.40
3587 3754 6.720309 TCCCAGATGAACAGTGATTCAAATA 58.280 36.000 0.00 0.00 41.78 1.40
3588 3755 5.573219 TCCCAGATGAACAGTGATTCAAAT 58.427 37.500 0.00 0.00 41.78 2.32
3589 3756 4.984295 TCCCAGATGAACAGTGATTCAAA 58.016 39.130 0.00 0.00 41.78 2.69
3590 3757 4.582869 CTCCCAGATGAACAGTGATTCAA 58.417 43.478 0.00 0.00 41.78 2.69
3591 3758 3.620719 GCTCCCAGATGAACAGTGATTCA 60.621 47.826 0.00 3.86 42.62 2.57
3592 3759 2.941720 GCTCCCAGATGAACAGTGATTC 59.058 50.000 0.00 0.00 0.00 2.52
3593 3760 2.306805 TGCTCCCAGATGAACAGTGATT 59.693 45.455 0.00 0.00 0.00 2.57
3594 3761 1.911357 TGCTCCCAGATGAACAGTGAT 59.089 47.619 0.00 0.00 0.00 3.06
3595 3762 1.351076 TGCTCCCAGATGAACAGTGA 58.649 50.000 0.00 0.00 0.00 3.41
3596 3763 2.414994 ATGCTCCCAGATGAACAGTG 57.585 50.000 0.00 0.00 0.00 3.66
3597 3764 3.713248 TGATATGCTCCCAGATGAACAGT 59.287 43.478 0.00 0.00 0.00 3.55
3598 3765 4.316645 CTGATATGCTCCCAGATGAACAG 58.683 47.826 0.00 0.00 0.00 3.16
3599 3766 3.495629 GCTGATATGCTCCCAGATGAACA 60.496 47.826 0.00 0.00 0.00 3.18
3600 3767 3.072944 GCTGATATGCTCCCAGATGAAC 58.927 50.000 0.00 0.00 0.00 3.18
3601 3768 2.977580 AGCTGATATGCTCCCAGATGAA 59.022 45.455 0.00 0.00 39.34 2.57
3602 3769 2.617658 AGCTGATATGCTCCCAGATGA 58.382 47.619 0.00 0.00 39.34 2.92
3612 3779 3.857549 TCTGATACCGAGCTGATATGC 57.142 47.619 0.00 0.00 0.00 3.14
3613 3780 5.579904 CCAAATCTGATACCGAGCTGATATG 59.420 44.000 0.00 0.00 30.38 1.78
3614 3781 5.481824 TCCAAATCTGATACCGAGCTGATAT 59.518 40.000 0.00 0.00 30.38 1.63
3615 3782 4.832823 TCCAAATCTGATACCGAGCTGATA 59.167 41.667 0.00 0.00 30.38 2.15
3616 3783 3.643320 TCCAAATCTGATACCGAGCTGAT 59.357 43.478 0.00 0.00 31.68 2.90
3617 3784 3.031013 TCCAAATCTGATACCGAGCTGA 58.969 45.455 0.00 0.00 0.00 4.26
3618 3785 3.459232 TCCAAATCTGATACCGAGCTG 57.541 47.619 0.00 0.00 0.00 4.24
3619 3786 4.696479 AATCCAAATCTGATACCGAGCT 57.304 40.909 0.00 0.00 0.00 4.09
3620 3787 5.559035 CGAAAATCCAAATCTGATACCGAGC 60.559 44.000 0.00 0.00 0.00 5.03
3621 3788 5.559035 GCGAAAATCCAAATCTGATACCGAG 60.559 44.000 0.00 0.00 0.00 4.63
3622 3789 4.272504 GCGAAAATCCAAATCTGATACCGA 59.727 41.667 0.00 0.00 0.00 4.69
3623 3790 4.527564 GCGAAAATCCAAATCTGATACCG 58.472 43.478 0.00 0.00 0.00 4.02
3624 3791 4.527564 CGCGAAAATCCAAATCTGATACC 58.472 43.478 0.00 0.00 0.00 2.73
3625 3792 3.968724 GCGCGAAAATCCAAATCTGATAC 59.031 43.478 12.10 0.00 0.00 2.24
3626 3793 3.876914 AGCGCGAAAATCCAAATCTGATA 59.123 39.130 12.10 0.00 0.00 2.15
3627 3794 2.684881 AGCGCGAAAATCCAAATCTGAT 59.315 40.909 12.10 0.00 0.00 2.90
3628 3795 2.083774 AGCGCGAAAATCCAAATCTGA 58.916 42.857 12.10 0.00 0.00 3.27
3629 3796 2.159531 TGAGCGCGAAAATCCAAATCTG 60.160 45.455 12.10 0.00 0.00 2.90
3630 3797 2.083774 TGAGCGCGAAAATCCAAATCT 58.916 42.857 12.10 0.00 0.00 2.40
3631 3798 2.444351 CTGAGCGCGAAAATCCAAATC 58.556 47.619 12.10 0.00 0.00 2.17
3632 3799 1.133025 CCTGAGCGCGAAAATCCAAAT 59.867 47.619 12.10 0.00 0.00 2.32
3633 3800 0.521291 CCTGAGCGCGAAAATCCAAA 59.479 50.000 12.10 0.00 0.00 3.28
3634 3801 1.922135 GCCTGAGCGCGAAAATCCAA 61.922 55.000 12.10 0.00 0.00 3.53
3635 3802 2.398554 GCCTGAGCGCGAAAATCCA 61.399 57.895 12.10 0.00 0.00 3.41
3636 3803 2.405191 GCCTGAGCGCGAAAATCC 59.595 61.111 12.10 0.00 0.00 3.01
3646 3813 2.422276 AAACAAAATGTCGCCTGAGC 57.578 45.000 0.00 0.00 0.00 4.26
3647 3814 4.024048 ACAGTAAACAAAATGTCGCCTGAG 60.024 41.667 9.02 0.00 0.00 3.35
3648 3815 3.880490 ACAGTAAACAAAATGTCGCCTGA 59.120 39.130 9.02 0.00 0.00 3.86
3649 3816 3.974401 CACAGTAAACAAAATGTCGCCTG 59.026 43.478 0.00 0.00 0.00 4.85
3650 3817 3.630312 ACACAGTAAACAAAATGTCGCCT 59.370 39.130 0.00 0.00 0.00 5.52
3651 3818 3.959943 ACACAGTAAACAAAATGTCGCC 58.040 40.909 0.00 0.00 0.00 5.54
3652 3819 7.638683 GGATATACACAGTAAACAAAATGTCGC 59.361 37.037 0.00 0.00 0.00 5.19
3653 3820 8.661257 TGGATATACACAGTAAACAAAATGTCG 58.339 33.333 0.00 0.00 0.00 4.35
3656 3823 9.950680 GGATGGATATACACAGTAAACAAAATG 57.049 33.333 0.00 0.00 0.00 2.32
3657 3824 8.836413 CGGATGGATATACACAGTAAACAAAAT 58.164 33.333 0.00 0.00 0.00 1.82
3658 3825 7.825270 ACGGATGGATATACACAGTAAACAAAA 59.175 33.333 0.00 0.00 0.00 2.44
3659 3826 7.332557 ACGGATGGATATACACAGTAAACAAA 58.667 34.615 0.00 0.00 0.00 2.83
3660 3827 6.880484 ACGGATGGATATACACAGTAAACAA 58.120 36.000 0.00 0.00 0.00 2.83
3661 3828 6.097129 TGACGGATGGATATACACAGTAAACA 59.903 38.462 0.00 0.00 0.00 2.83
3662 3829 6.509656 TGACGGATGGATATACACAGTAAAC 58.490 40.000 0.00 0.00 0.00 2.01
3663 3830 6.718522 TGACGGATGGATATACACAGTAAA 57.281 37.500 0.00 0.00 0.00 2.01
3664 3831 6.718522 TTGACGGATGGATATACACAGTAA 57.281 37.500 0.00 0.00 0.00 2.24
3665 3832 6.718522 TTTGACGGATGGATATACACAGTA 57.281 37.500 0.00 0.00 0.00 2.74
3666 3833 5.607939 TTTGACGGATGGATATACACAGT 57.392 39.130 0.00 0.00 0.00 3.55
3667 3834 7.151976 TGTATTTGACGGATGGATATACACAG 58.848 38.462 0.00 0.00 0.00 3.66
3668 3835 7.056844 TGTATTTGACGGATGGATATACACA 57.943 36.000 0.00 0.00 0.00 3.72
3669 3836 6.090898 GCTGTATTTGACGGATGGATATACAC 59.909 42.308 0.00 0.00 36.40 2.90
3670 3837 6.014584 AGCTGTATTTGACGGATGGATATACA 60.015 38.462 0.00 0.00 36.40 2.29
3671 3838 6.311445 CAGCTGTATTTGACGGATGGATATAC 59.689 42.308 5.25 0.00 45.44 1.47
3672 3839 6.398095 CAGCTGTATTTGACGGATGGATATA 58.602 40.000 5.25 0.00 45.44 0.86
3673 3840 5.240891 CAGCTGTATTTGACGGATGGATAT 58.759 41.667 5.25 0.00 45.44 1.63
3674 3841 4.631131 CAGCTGTATTTGACGGATGGATA 58.369 43.478 5.25 0.00 45.44 2.59
3675 3842 3.470709 CAGCTGTATTTGACGGATGGAT 58.529 45.455 5.25 0.00 45.44 3.41
3676 3843 2.905075 CAGCTGTATTTGACGGATGGA 58.095 47.619 5.25 0.00 45.44 3.41
3679 3846 5.705441 TCTTTTTCAGCTGTATTTGACGGAT 59.295 36.000 14.67 0.00 36.40 4.18
3680 3847 5.060506 TCTTTTTCAGCTGTATTTGACGGA 58.939 37.500 14.67 0.00 36.40 4.69
3681 3848 5.356882 TCTTTTTCAGCTGTATTTGACGG 57.643 39.130 14.67 0.00 37.51 4.79
3682 3849 4.848299 GCTCTTTTTCAGCTGTATTTGACG 59.152 41.667 14.67 0.00 33.75 4.35
3683 3850 6.006759 AGCTCTTTTTCAGCTGTATTTGAC 57.993 37.500 14.67 0.00 45.85 3.18
3692 3859 8.612823 CACAAATGTGGAGCTCTTTTTCAGCT 62.613 42.308 14.64 0.00 42.50 4.24
3693 3860 3.930634 AATGTGGAGCTCTTTTTCAGC 57.069 42.857 14.64 0.00 37.12 4.26
3694 3861 4.980434 CACAAATGTGGAGCTCTTTTTCAG 59.020 41.667 14.64 2.34 42.10 3.02
3695 3862 4.935702 CACAAATGTGGAGCTCTTTTTCA 58.064 39.130 14.64 0.00 42.10 2.69
3709 3876 2.821969 GCAGATGGAAGGACACAAATGT 59.178 45.455 0.00 0.00 43.71 2.71
3710 3877 3.087031 AGCAGATGGAAGGACACAAATG 58.913 45.455 0.00 0.00 0.00 2.32
3711 3878 3.446442 AGCAGATGGAAGGACACAAAT 57.554 42.857 0.00 0.00 0.00 2.32
3712 3879 2.886523 CAAGCAGATGGAAGGACACAAA 59.113 45.455 0.00 0.00 0.00 2.83
3713 3880 2.158623 ACAAGCAGATGGAAGGACACAA 60.159 45.455 0.00 0.00 0.00 3.33
3714 3881 1.421268 ACAAGCAGATGGAAGGACACA 59.579 47.619 0.00 0.00 0.00 3.72
3715 3882 2.079925 GACAAGCAGATGGAAGGACAC 58.920 52.381 0.00 0.00 0.00 3.67
3716 3883 1.980765 AGACAAGCAGATGGAAGGACA 59.019 47.619 0.00 0.00 0.00 4.02
3717 3884 2.777832 AGACAAGCAGATGGAAGGAC 57.222 50.000 0.00 0.00 0.00 3.85
3718 3885 4.908601 TTTAGACAAGCAGATGGAAGGA 57.091 40.909 0.00 0.00 0.00 3.36
3719 3886 5.964958 TTTTTAGACAAGCAGATGGAAGG 57.035 39.130 0.00 0.00 0.00 3.46
3720 3887 6.151648 TCCATTTTTAGACAAGCAGATGGAAG 59.848 38.462 0.00 0.00 38.94 3.46
3721 3888 6.009589 TCCATTTTTAGACAAGCAGATGGAA 58.990 36.000 0.00 0.00 38.94 3.53
3722 3889 5.415701 GTCCATTTTTAGACAAGCAGATGGA 59.584 40.000 0.00 0.00 39.42 3.41
3723 3890 5.644644 GTCCATTTTTAGACAAGCAGATGG 58.355 41.667 0.00 0.00 35.31 3.51
3724 3891 5.327091 CGTCCATTTTTAGACAAGCAGATG 58.673 41.667 0.00 0.00 33.08 2.90
3725 3892 4.396166 CCGTCCATTTTTAGACAAGCAGAT 59.604 41.667 0.00 0.00 33.08 2.90
3726 3893 3.751175 CCGTCCATTTTTAGACAAGCAGA 59.249 43.478 0.00 0.00 33.08 4.26
3727 3894 3.119849 CCCGTCCATTTTTAGACAAGCAG 60.120 47.826 0.00 0.00 33.08 4.24
3728 3895 2.817258 CCCGTCCATTTTTAGACAAGCA 59.183 45.455 0.00 0.00 33.08 3.91
3729 3896 2.817844 ACCCGTCCATTTTTAGACAAGC 59.182 45.455 0.00 0.00 33.08 4.01
3730 3897 4.069304 TGACCCGTCCATTTTTAGACAAG 58.931 43.478 0.00 0.00 33.08 3.16
3731 3898 4.088056 TGACCCGTCCATTTTTAGACAA 57.912 40.909 0.00 0.00 33.08 3.18
3732 3899 3.773418 TGACCCGTCCATTTTTAGACA 57.227 42.857 0.00 0.00 33.08 3.41
3733 3900 5.638596 ATTTGACCCGTCCATTTTTAGAC 57.361 39.130 0.00 0.00 0.00 2.59
3734 3901 6.658188 AAATTTGACCCGTCCATTTTTAGA 57.342 33.333 0.00 0.00 0.00 2.10
3735 3902 8.996024 ATAAAATTTGACCCGTCCATTTTTAG 57.004 30.769 14.95 0.00 35.20 1.85
3736 3903 9.780186 AAATAAAATTTGACCCGTCCATTTTTA 57.220 25.926 14.95 12.13 35.20 1.52
3737 3904 8.563732 CAAATAAAATTTGACCCGTCCATTTTT 58.436 29.630 14.95 10.88 35.20 1.94
3738 3905 7.308288 GCAAATAAAATTTGACCCGTCCATTTT 60.308 33.333 14.83 14.47 36.39 1.82
3739 3906 6.148645 GCAAATAAAATTTGACCCGTCCATTT 59.851 34.615 14.83 0.00 0.00 2.32
3740 3907 5.641636 GCAAATAAAATTTGACCCGTCCATT 59.358 36.000 14.83 0.00 0.00 3.16
3741 3908 5.175127 GCAAATAAAATTTGACCCGTCCAT 58.825 37.500 14.83 0.00 0.00 3.41
3742 3909 4.039245 TGCAAATAAAATTTGACCCGTCCA 59.961 37.500 14.83 0.97 0.00 4.02
3743 3910 4.561105 TGCAAATAAAATTTGACCCGTCC 58.439 39.130 14.83 0.00 0.00 4.79
3744 3911 5.227152 ACTGCAAATAAAATTTGACCCGTC 58.773 37.500 14.83 0.00 0.00 4.79
3745 3912 5.208463 ACTGCAAATAAAATTTGACCCGT 57.792 34.783 14.83 4.34 0.00 5.28
3746 3913 7.201513 CCATAACTGCAAATAAAATTTGACCCG 60.202 37.037 14.83 3.84 0.00 5.28
3747 3914 7.413988 GCCATAACTGCAAATAAAATTTGACCC 60.414 37.037 14.83 0.49 0.00 4.46
3748 3915 7.413988 GGCCATAACTGCAAATAAAATTTGACC 60.414 37.037 14.83 1.09 0.00 4.02
3749 3916 7.334171 AGGCCATAACTGCAAATAAAATTTGAC 59.666 33.333 14.83 7.79 0.00 3.18
3750 3917 7.393216 AGGCCATAACTGCAAATAAAATTTGA 58.607 30.769 14.83 0.00 0.00 2.69
3751 3918 7.614124 AGGCCATAACTGCAAATAAAATTTG 57.386 32.000 5.01 7.80 0.00 2.32
3752 3919 8.757877 TCTAGGCCATAACTGCAAATAAAATTT 58.242 29.630 5.01 0.00 0.00 1.82
3753 3920 8.305046 TCTAGGCCATAACTGCAAATAAAATT 57.695 30.769 5.01 0.00 0.00 1.82
3754 3921 7.896383 TCTAGGCCATAACTGCAAATAAAAT 57.104 32.000 5.01 0.00 0.00 1.82
3755 3922 7.710676 TTCTAGGCCATAACTGCAAATAAAA 57.289 32.000 5.01 0.00 0.00 1.52
3756 3923 7.710676 TTTCTAGGCCATAACTGCAAATAAA 57.289 32.000 5.01 0.00 0.00 1.40
3757 3924 7.630513 GCTTTTCTAGGCCATAACTGCAAATAA 60.631 37.037 5.01 0.00 0.00 1.40
3758 3925 6.183360 GCTTTTCTAGGCCATAACTGCAAATA 60.183 38.462 5.01 0.00 0.00 1.40
3759 3926 5.394553 GCTTTTCTAGGCCATAACTGCAAAT 60.395 40.000 5.01 0.00 0.00 2.32
3760 3927 4.082245 GCTTTTCTAGGCCATAACTGCAAA 60.082 41.667 5.01 0.00 0.00 3.68
3761 3928 3.443681 GCTTTTCTAGGCCATAACTGCAA 59.556 43.478 5.01 0.00 0.00 4.08
3762 3929 3.016736 GCTTTTCTAGGCCATAACTGCA 58.983 45.455 5.01 0.00 0.00 4.41
3763 3930 3.016736 TGCTTTTCTAGGCCATAACTGC 58.983 45.455 5.01 1.18 0.00 4.40
3764 3931 5.643379 TTTGCTTTTCTAGGCCATAACTG 57.357 39.130 5.01 0.00 0.00 3.16
3765 3932 6.857437 AATTTGCTTTTCTAGGCCATAACT 57.143 33.333 5.01 0.00 0.00 2.24
3766 3933 9.249457 GATTAATTTGCTTTTCTAGGCCATAAC 57.751 33.333 5.01 0.00 0.00 1.89
3767 3934 9.200817 AGATTAATTTGCTTTTCTAGGCCATAA 57.799 29.630 5.01 0.00 0.00 1.90
3768 3935 8.766994 AGATTAATTTGCTTTTCTAGGCCATA 57.233 30.769 5.01 0.00 0.00 2.74
3769 3936 7.666063 AGATTAATTTGCTTTTCTAGGCCAT 57.334 32.000 5.01 0.00 0.00 4.40
3770 3937 7.480760 AAGATTAATTTGCTTTTCTAGGCCA 57.519 32.000 5.01 0.00 0.00 5.36
3771 3938 8.777865 AAAAGATTAATTTGCTTTTCTAGGCC 57.222 30.769 0.00 0.00 37.28 5.19
3795 3962 9.612066 TGAGCATATCACTATTGACACATTAAA 57.388 29.630 0.00 0.00 33.38 1.52
3796 3963 9.783081 ATGAGCATATCACTATTGACACATTAA 57.217 29.630 0.00 0.00 41.91 1.40
3797 3964 9.211485 CATGAGCATATCACTATTGACACATTA 57.789 33.333 0.00 0.00 41.91 1.90
3798 3965 7.718314 ACATGAGCATATCACTATTGACACATT 59.282 33.333 0.00 0.00 41.91 2.71
3799 3966 7.172703 CACATGAGCATATCACTATTGACACAT 59.827 37.037 0.00 0.00 41.91 3.21
3800 3967 6.480981 CACATGAGCATATCACTATTGACACA 59.519 38.462 0.00 0.00 41.91 3.72
3801 3968 6.703165 TCACATGAGCATATCACTATTGACAC 59.297 38.462 0.00 0.00 41.91 3.67
3802 3969 6.819284 TCACATGAGCATATCACTATTGACA 58.181 36.000 0.00 0.00 41.91 3.58
3803 3970 7.601508 TGATCACATGAGCATATCACTATTGAC 59.398 37.037 0.00 0.00 41.91 3.18
3804 3971 7.601508 GTGATCACATGAGCATATCACTATTGA 59.398 37.037 21.07 0.00 42.80 2.57
3805 3972 7.740246 GTGATCACATGAGCATATCACTATTG 58.260 38.462 21.07 0.00 42.80 1.90
3806 3973 7.902387 GTGATCACATGAGCATATCACTATT 57.098 36.000 21.07 0.00 42.80 1.73
3810 3977 6.685657 TCTAGTGATCACATGAGCATATCAC 58.314 40.000 27.02 12.54 42.80 3.06
3811 3978 6.906157 TCTAGTGATCACATGAGCATATCA 57.094 37.500 27.02 2.59 42.80 2.15
3812 3979 8.033626 TCAATCTAGTGATCACATGAGCATATC 58.966 37.037 27.02 0.00 42.80 1.63
3813 3980 7.904205 TCAATCTAGTGATCACATGAGCATAT 58.096 34.615 27.02 6.18 42.80 1.78
3814 3981 7.294017 TCAATCTAGTGATCACATGAGCATA 57.706 36.000 27.02 8.39 42.80 3.14
3815 3982 6.170846 TCAATCTAGTGATCACATGAGCAT 57.829 37.500 27.02 7.64 42.80 3.79
3816 3983 5.603170 TCAATCTAGTGATCACATGAGCA 57.397 39.130 27.02 11.26 38.23 4.26
3817 3984 5.990386 ACATCAATCTAGTGATCACATGAGC 59.010 40.000 27.02 0.00 36.04 4.26
3818 3985 6.985059 ACACATCAATCTAGTGATCACATGAG 59.015 38.462 27.02 19.42 36.04 2.90
3819 3986 6.881570 ACACATCAATCTAGTGATCACATGA 58.118 36.000 27.02 22.27 36.04 3.07
3820 3987 6.759827 TGACACATCAATCTAGTGATCACATG 59.240 38.462 27.02 20.17 36.04 3.21
3821 3988 6.881570 TGACACATCAATCTAGTGATCACAT 58.118 36.000 27.02 14.51 36.04 3.21
3822 3989 6.284891 TGACACATCAATCTAGTGATCACA 57.715 37.500 27.02 12.38 36.04 3.58
3823 3990 7.783090 AATGACACATCAATCTAGTGATCAC 57.217 36.000 18.47 18.47 38.69 3.06
3824 3991 9.317936 GTAAATGACACATCAATCTAGTGATCA 57.682 33.333 0.00 0.00 38.69 2.92
3825 3992 8.483218 CGTAAATGACACATCAATCTAGTGATC 58.517 37.037 0.00 0.00 38.69 2.92
3826 3993 8.197439 TCGTAAATGACACATCAATCTAGTGAT 58.803 33.333 0.00 0.00 38.69 3.06
3827 3994 7.488150 GTCGTAAATGACACATCAATCTAGTGA 59.512 37.037 0.00 0.00 38.69 3.41
3828 3995 7.275560 TGTCGTAAATGACACATCAATCTAGTG 59.724 37.037 0.84 0.00 43.62 2.74
3829 3996 7.320399 TGTCGTAAATGACACATCAATCTAGT 58.680 34.615 0.84 0.00 43.62 2.57
3830 3997 7.755582 TGTCGTAAATGACACATCAATCTAG 57.244 36.000 0.84 0.00 43.62 2.43
3841 4008 6.612247 ACAGTCAATTTGTCGTAAATGACA 57.388 33.333 18.99 0.84 46.63 3.58
3842 4009 7.793902 ACTACAGTCAATTTGTCGTAAATGAC 58.206 34.615 14.44 14.44 39.37 3.06
3843 4010 7.956420 ACTACAGTCAATTTGTCGTAAATGA 57.044 32.000 0.00 0.00 0.00 2.57
3848 4015 9.027129 GCATATTACTACAGTCAATTTGTCGTA 57.973 33.333 0.00 0.00 0.00 3.43
3849 4016 7.253983 CGCATATTACTACAGTCAATTTGTCGT 60.254 37.037 0.00 0.00 0.00 4.34
3850 4017 7.057402 CGCATATTACTACAGTCAATTTGTCG 58.943 38.462 0.00 0.00 0.00 4.35
3851 4018 7.906160 ACGCATATTACTACAGTCAATTTGTC 58.094 34.615 0.00 0.00 0.00 3.18
3852 4019 7.843490 ACGCATATTACTACAGTCAATTTGT 57.157 32.000 0.00 0.00 0.00 2.83
3853 4020 9.031360 ACTACGCATATTACTACAGTCAATTTG 57.969 33.333 0.00 0.00 0.00 2.32
3854 4021 9.595823 AACTACGCATATTACTACAGTCAATTT 57.404 29.630 0.00 0.00 0.00 1.82
3855 4022 9.595823 AAACTACGCATATTACTACAGTCAATT 57.404 29.630 0.00 0.00 0.00 2.32
3856 4023 9.595823 AAAACTACGCATATTACTACAGTCAAT 57.404 29.630 0.00 0.00 0.00 2.57
3857 4024 8.991243 AAAACTACGCATATTACTACAGTCAA 57.009 30.769 0.00 0.00 0.00 3.18
3858 4025 8.991243 AAAAACTACGCATATTACTACAGTCA 57.009 30.769 0.00 0.00 0.00 3.41
3859 4026 8.538039 GGAAAAACTACGCATATTACTACAGTC 58.462 37.037 0.00 0.00 0.00 3.51
3860 4027 7.493645 GGGAAAAACTACGCATATTACTACAGT 59.506 37.037 0.00 0.00 0.00 3.55
3861 4028 7.709613 AGGGAAAAACTACGCATATTACTACAG 59.290 37.037 0.00 0.00 0.00 2.74
3862 4029 7.558604 AGGGAAAAACTACGCATATTACTACA 58.441 34.615 0.00 0.00 0.00 2.74
3863 4030 7.924947 AGAGGGAAAAACTACGCATATTACTAC 59.075 37.037 0.00 0.00 0.00 2.73
3864 4031 8.015185 AGAGGGAAAAACTACGCATATTACTA 57.985 34.615 0.00 0.00 0.00 1.82
3865 4032 6.885922 AGAGGGAAAAACTACGCATATTACT 58.114 36.000 0.00 0.00 0.00 2.24
3866 4033 6.985059 AGAGAGGGAAAAACTACGCATATTAC 59.015 38.462 0.00 0.00 0.00 1.89
3867 4034 6.984474 CAGAGAGGGAAAAACTACGCATATTA 59.016 38.462 0.00 0.00 0.00 0.98
3868 4035 5.817816 CAGAGAGGGAAAAACTACGCATATT 59.182 40.000 0.00 0.00 0.00 1.28
3869 4036 5.360591 CAGAGAGGGAAAAACTACGCATAT 58.639 41.667 0.00 0.00 0.00 1.78
3870 4037 4.382685 CCAGAGAGGGAAAAACTACGCATA 60.383 45.833 0.00 0.00 0.00 3.14
3871 4038 3.600388 CAGAGAGGGAAAAACTACGCAT 58.400 45.455 0.00 0.00 0.00 4.73
3872 4039 2.289444 CCAGAGAGGGAAAAACTACGCA 60.289 50.000 0.00 0.00 0.00 5.24
3873 4040 2.028385 TCCAGAGAGGGAAAAACTACGC 60.028 50.000 0.00 0.00 38.24 4.42
3874 4041 3.851098 CTCCAGAGAGGGAAAAACTACG 58.149 50.000 0.00 0.00 36.27 3.51
3886 4053 3.079578 TGTTGTACGTACCTCCAGAGAG 58.920 50.000 22.43 0.00 40.09 3.20
3887 4054 3.144657 TGTTGTACGTACCTCCAGAGA 57.855 47.619 22.43 0.00 0.00 3.10
3888 4055 3.442625 TGATGTTGTACGTACCTCCAGAG 59.557 47.826 22.43 0.00 0.00 3.35
3889 4056 3.423749 TGATGTTGTACGTACCTCCAGA 58.576 45.455 22.43 0.00 0.00 3.86
3890 4057 3.861276 TGATGTTGTACGTACCTCCAG 57.139 47.619 22.43 0.00 0.00 3.86
3891 4058 3.181494 CGATGATGTTGTACGTACCTCCA 60.181 47.826 22.43 15.65 0.00 3.86
3892 4059 3.181493 ACGATGATGTTGTACGTACCTCC 60.181 47.826 22.43 10.73 35.49 4.30
3893 4060 4.025015 ACGATGATGTTGTACGTACCTC 57.975 45.455 22.43 15.11 35.49 3.85
3894 4061 3.441222 TGACGATGATGTTGTACGTACCT 59.559 43.478 22.43 5.18 37.32 3.08
3895 4062 3.761657 TGACGATGATGTTGTACGTACC 58.238 45.455 22.43 8.99 37.32 3.34
3896 4063 5.090757 TCTTGACGATGATGTTGTACGTAC 58.909 41.667 18.90 18.90 37.32 3.67
3897 4064 5.122711 TCTCTTGACGATGATGTTGTACGTA 59.877 40.000 0.00 0.00 37.32 3.57
3898 4065 4.082949 TCTCTTGACGATGATGTTGTACGT 60.083 41.667 0.00 0.00 39.82 3.57
3899 4066 4.263209 GTCTCTTGACGATGATGTTGTACG 59.737 45.833 0.00 0.00 33.15 3.67
3900 4067 5.688348 GTCTCTTGACGATGATGTTGTAC 57.312 43.478 0.00 0.00 33.15 2.90


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.