Multiple sequence alignment - TraesCS4A01G426200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G426200 chr4A 100.000 3832 0 0 1 3832 697946253 697950084 0.000000e+00 7077.0
1 TraesCS4A01G426200 chr4A 89.982 1118 95 13 2724 3832 698036768 698037877 0.000000e+00 1428.0
2 TraesCS4A01G426200 chr4A 88.596 228 25 1 1621 1848 698024481 698024707 3.770000e-70 276.0
3 TraesCS4A01G426200 chr4A 88.235 119 10 1 1843 1961 698034622 698034736 5.160000e-29 139.0
4 TraesCS4A01G426200 chr7D 87.175 2074 152 51 695 2746 30845364 30843383 0.000000e+00 2252.0
5 TraesCS4A01G426200 chr7D 91.351 555 36 4 2729 3282 30843333 30842790 0.000000e+00 749.0
6 TraesCS4A01G426200 chr7D 93.737 495 27 2 3341 3832 30842805 30842312 0.000000e+00 739.0
7 TraesCS4A01G426200 chr7D 81.979 283 35 10 3473 3750 135351223 135351494 3.850000e-55 226.0
8 TraesCS4A01G426200 chr7D 78.919 370 43 21 999 1362 135348632 135348972 6.450000e-53 219.0
9 TraesCS4A01G426200 chr7D 93.548 62 4 0 2724 2785 30843381 30843320 4.080000e-15 93.5
10 TraesCS4A01G426200 chr7A 84.656 2066 167 60 698 2740 31107685 31105747 0.000000e+00 1921.0
11 TraesCS4A01G426200 chr7A 89.973 1117 80 7 2724 3832 31105688 31104596 0.000000e+00 1413.0
12 TraesCS4A01G426200 chr7A 82.353 391 49 14 3447 3832 134485680 134486055 4.780000e-84 322.0
13 TraesCS4A01G426200 chr7A 79.692 325 43 10 2745 3055 134483007 134483322 3.000000e-51 213.0
14 TraesCS4A01G426200 chr7A 93.548 62 4 0 2724 2785 31105731 31105670 4.080000e-15 93.5
15 TraesCS4A01G426200 chr3B 99.010 101 1 0 1 101 433018804 433018904 8.460000e-42 182.0
16 TraesCS4A01G426200 chr3B 98.990 99 1 0 1 99 716219029 716219127 1.090000e-40 178.0
17 TraesCS4A01G426200 chr5A 99.000 100 1 0 1 100 673970861 673970960 3.040000e-41 180.0
18 TraesCS4A01G426200 chr7B 98.039 102 2 0 1 102 430304491 430304390 1.090000e-40 178.0
19 TraesCS4A01G426200 chr6A 98.039 102 2 0 1 102 467041066 467040965 1.090000e-40 178.0
20 TraesCS4A01G426200 chr6A 97.115 104 3 0 1 104 16534082 16533979 3.930000e-40 176.0
21 TraesCS4A01G426200 chr3A 98.039 102 2 0 1 102 699767598 699767699 1.090000e-40 178.0
22 TraesCS4A01G426200 chr1A 96.262 107 4 0 1 107 56602094 56601988 3.930000e-40 176.0
23 TraesCS4A01G426200 chr1D 95.455 110 4 1 1 109 86784361 86784252 1.420000e-39 174.0
24 TraesCS4A01G426200 chr5D 95.745 47 2 0 1306 1352 538441973 538441927 4.110000e-10 76.8
25 TraesCS4A01G426200 chr5B 95.745 47 2 0 1306 1352 679559560 679559514 4.110000e-10 76.8
26 TraesCS4A01G426200 chr6D 74.586 181 29 12 256 424 418224166 418223991 3.200000e-06 63.9
27 TraesCS4A01G426200 chr4D 94.872 39 2 0 380 418 463908362 463908324 1.150000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G426200 chr4A 697946253 697950084 3831 False 7077.000 7077 100.000000 1 3832 1 chr4A.!!$F1 3831
1 TraesCS4A01G426200 chr4A 698034622 698037877 3255 False 783.500 1428 89.108500 1843 3832 2 chr4A.!!$F3 1989
2 TraesCS4A01G426200 chr7D 30842312 30845364 3052 True 958.375 2252 91.452750 695 3832 4 chr7D.!!$R1 3137
3 TraesCS4A01G426200 chr7D 135348632 135351494 2862 False 222.500 226 80.449000 999 3750 2 chr7D.!!$F1 2751
4 TraesCS4A01G426200 chr7A 31104596 31107685 3089 True 1142.500 1921 89.392333 698 3832 3 chr7A.!!$R1 3134
5 TraesCS4A01G426200 chr7A 134483007 134486055 3048 False 267.500 322 81.022500 2745 3832 2 chr7A.!!$F1 1087

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
32 33 0.032515 TCCCGATGGAGAGGTGCTTA 60.033 55.0 0.00 0.0 35.03 3.09 F
1649 1673 0.035439 GTTTTGGATCGAGCAGGGGA 60.035 55.0 1.84 0.0 0.00 4.81 F
2452 3774 0.037139 TCCATTACGTTGTGGGACGG 60.037 55.0 16.12 0.0 46.77 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1761 1788 0.032615 TTGACAAAACTGGGGTGGCT 60.033 50.000 0.00 0.0 0.00 4.75 R
2470 3792 0.546122 ACTGTGGCTCCACTCAACAA 59.454 50.000 18.72 0.0 46.30 2.83 R
3275 6449 1.144913 AGGTAAGCCAAGAGTTTGCCA 59.855 47.619 0.00 0.0 42.74 4.92 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 2.969950 TCTAACCCAACTATCCCGATGG 59.030 50.000 0.00 0.00 0.00 3.51
23 24 1.424638 ACCCAACTATCCCGATGGAG 58.575 55.000 0.00 0.00 46.08 3.86
24 25 1.062428 ACCCAACTATCCCGATGGAGA 60.062 52.381 0.00 0.00 46.08 3.71
29 30 0.605589 CTATCCCGATGGAGAGGTGC 59.394 60.000 0.00 0.00 44.71 5.01
30 31 0.188587 TATCCCGATGGAGAGGTGCT 59.811 55.000 0.00 0.00 46.08 4.40
31 32 0.692419 ATCCCGATGGAGAGGTGCTT 60.692 55.000 0.00 0.00 46.08 3.91
32 33 0.032515 TCCCGATGGAGAGGTGCTTA 60.033 55.000 0.00 0.00 35.03 3.09
33 34 1.051812 CCCGATGGAGAGGTGCTTAT 58.948 55.000 0.00 0.00 0.00 1.73
34 35 1.417890 CCCGATGGAGAGGTGCTTATT 59.582 52.381 0.00 0.00 0.00 1.40
35 36 2.158755 CCCGATGGAGAGGTGCTTATTT 60.159 50.000 0.00 0.00 0.00 1.40
36 37 2.874701 CCGATGGAGAGGTGCTTATTTG 59.125 50.000 0.00 0.00 0.00 2.32
37 38 2.874701 CGATGGAGAGGTGCTTATTTGG 59.125 50.000 0.00 0.00 0.00 3.28
38 39 2.806945 TGGAGAGGTGCTTATTTGGG 57.193 50.000 0.00 0.00 0.00 4.12
39 40 1.992557 TGGAGAGGTGCTTATTTGGGT 59.007 47.619 0.00 0.00 0.00 4.51
40 41 2.378547 TGGAGAGGTGCTTATTTGGGTT 59.621 45.455 0.00 0.00 0.00 4.11
41 42 3.589735 TGGAGAGGTGCTTATTTGGGTTA 59.410 43.478 0.00 0.00 0.00 2.85
42 43 4.200092 GGAGAGGTGCTTATTTGGGTTAG 58.800 47.826 0.00 0.00 0.00 2.34
43 44 4.080526 GGAGAGGTGCTTATTTGGGTTAGA 60.081 45.833 0.00 0.00 0.00 2.10
44 45 5.104259 AGAGGTGCTTATTTGGGTTAGAG 57.896 43.478 0.00 0.00 0.00 2.43
45 46 4.536489 AGAGGTGCTTATTTGGGTTAGAGT 59.464 41.667 0.00 0.00 0.00 3.24
46 47 4.589908 AGGTGCTTATTTGGGTTAGAGTG 58.410 43.478 0.00 0.00 0.00 3.51
47 48 4.042934 AGGTGCTTATTTGGGTTAGAGTGT 59.957 41.667 0.00 0.00 0.00 3.55
48 49 4.156008 GGTGCTTATTTGGGTTAGAGTGTG 59.844 45.833 0.00 0.00 0.00 3.82
49 50 4.760204 GTGCTTATTTGGGTTAGAGTGTGT 59.240 41.667 0.00 0.00 0.00 3.72
50 51 5.240844 GTGCTTATTTGGGTTAGAGTGTGTT 59.759 40.000 0.00 0.00 0.00 3.32
51 52 6.428771 GTGCTTATTTGGGTTAGAGTGTGTTA 59.571 38.462 0.00 0.00 0.00 2.41
52 53 6.653320 TGCTTATTTGGGTTAGAGTGTGTTAG 59.347 38.462 0.00 0.00 0.00 2.34
53 54 6.877322 GCTTATTTGGGTTAGAGTGTGTTAGA 59.123 38.462 0.00 0.00 0.00 2.10
54 55 7.389607 GCTTATTTGGGTTAGAGTGTGTTAGAA 59.610 37.037 0.00 0.00 0.00 2.10
55 56 9.280174 CTTATTTGGGTTAGAGTGTGTTAGAAA 57.720 33.333 0.00 0.00 0.00 2.52
56 57 9.629878 TTATTTGGGTTAGAGTGTGTTAGAAAA 57.370 29.630 0.00 0.00 0.00 2.29
57 58 8.706322 ATTTGGGTTAGAGTGTGTTAGAAAAT 57.294 30.769 0.00 0.00 0.00 1.82
58 59 9.802039 ATTTGGGTTAGAGTGTGTTAGAAAATA 57.198 29.630 0.00 0.00 0.00 1.40
59 60 9.629878 TTTGGGTTAGAGTGTGTTAGAAAATAA 57.370 29.630 0.00 0.00 0.00 1.40
60 61 8.611654 TGGGTTAGAGTGTGTTAGAAAATAAC 57.388 34.615 0.00 0.00 0.00 1.89
61 62 8.434392 TGGGTTAGAGTGTGTTAGAAAATAACT 58.566 33.333 0.08 0.00 0.00 2.24
62 63 8.933807 GGGTTAGAGTGTGTTAGAAAATAACTC 58.066 37.037 0.00 0.00 34.21 3.01
63 64 9.708092 GGTTAGAGTGTGTTAGAAAATAACTCT 57.292 33.333 7.50 7.50 43.79 3.24
91 92 8.690680 CTCTAACTGTGTTAGAGTATCCAAAC 57.309 38.462 26.67 0.00 41.73 2.93
92 93 8.185506 TCTAACTGTGTTAGAGTATCCAAACA 57.814 34.615 14.02 0.00 38.63 2.83
93 94 8.304596 TCTAACTGTGTTAGAGTATCCAAACAG 58.695 37.037 14.02 0.00 40.68 3.16
94 95 5.794894 ACTGTGTTAGAGTATCCAAACAGG 58.205 41.667 0.00 0.00 40.68 4.00
95 96 5.160607 TGTGTTAGAGTATCCAAACAGGG 57.839 43.478 0.00 0.00 40.68 4.45
96 97 3.939592 GTGTTAGAGTATCCAAACAGGGC 59.060 47.826 0.00 0.00 40.68 5.19
97 98 3.054655 TGTTAGAGTATCCAAACAGGGCC 60.055 47.826 0.00 0.00 36.81 5.80
98 99 1.668826 AGAGTATCCAAACAGGGCCA 58.331 50.000 6.18 0.00 38.24 5.36
99 100 2.208872 AGAGTATCCAAACAGGGCCAT 58.791 47.619 6.18 0.00 38.24 4.40
100 101 2.582636 AGAGTATCCAAACAGGGCCATT 59.417 45.455 6.18 0.00 38.24 3.16
101 102 2.689983 GAGTATCCAAACAGGGCCATTG 59.310 50.000 6.18 8.04 38.24 2.82
102 103 2.042979 AGTATCCAAACAGGGCCATTGT 59.957 45.455 6.18 5.56 38.24 2.71
103 104 2.917713 ATCCAAACAGGGCCATTGTA 57.082 45.000 6.18 0.00 38.24 2.41
104 105 2.214376 TCCAAACAGGGCCATTGTAG 57.786 50.000 6.18 8.31 38.24 2.74
105 106 1.427368 TCCAAACAGGGCCATTGTAGT 59.573 47.619 6.18 2.03 38.24 2.73
106 107 2.158385 TCCAAACAGGGCCATTGTAGTT 60.158 45.455 6.18 0.00 38.24 2.24
107 108 2.029110 CCAAACAGGGCCATTGTAGTTG 60.029 50.000 6.18 12.74 0.00 3.16
108 109 2.890311 CAAACAGGGCCATTGTAGTTGA 59.110 45.455 6.18 0.00 0.00 3.18
109 110 3.456380 AACAGGGCCATTGTAGTTGAT 57.544 42.857 6.18 0.00 0.00 2.57
110 111 4.584638 AACAGGGCCATTGTAGTTGATA 57.415 40.909 6.18 0.00 0.00 2.15
111 112 4.584638 ACAGGGCCATTGTAGTTGATAA 57.415 40.909 6.18 0.00 0.00 1.75
112 113 5.129368 ACAGGGCCATTGTAGTTGATAAT 57.871 39.130 6.18 0.00 0.00 1.28
113 114 5.133221 ACAGGGCCATTGTAGTTGATAATC 58.867 41.667 6.18 0.00 0.00 1.75
114 115 4.520492 CAGGGCCATTGTAGTTGATAATCC 59.480 45.833 6.18 0.00 0.00 3.01
115 116 4.416848 AGGGCCATTGTAGTTGATAATCCT 59.583 41.667 6.18 0.00 0.00 3.24
116 117 4.762251 GGGCCATTGTAGTTGATAATCCTC 59.238 45.833 4.39 0.00 0.00 3.71
117 118 4.762251 GGCCATTGTAGTTGATAATCCTCC 59.238 45.833 0.00 0.00 0.00 4.30
118 119 4.762251 GCCATTGTAGTTGATAATCCTCCC 59.238 45.833 0.00 0.00 0.00 4.30
119 120 5.316987 CCATTGTAGTTGATAATCCTCCCC 58.683 45.833 0.00 0.00 0.00 4.81
120 121 5.316987 CATTGTAGTTGATAATCCTCCCCC 58.683 45.833 0.00 0.00 0.00 5.40
138 139 2.972505 CACGTGCCCTGTGGTGAC 60.973 66.667 0.82 0.00 33.69 3.67
139 140 4.250305 ACGTGCCCTGTGGTGACC 62.250 66.667 0.00 0.00 0.00 4.02
140 141 3.941188 CGTGCCCTGTGGTGACCT 61.941 66.667 2.11 0.00 0.00 3.85
141 142 2.515901 GTGCCCTGTGGTGACCTT 59.484 61.111 2.11 0.00 0.00 3.50
142 143 1.758592 GTGCCCTGTGGTGACCTTA 59.241 57.895 2.11 0.00 0.00 2.69
143 144 0.321653 GTGCCCTGTGGTGACCTTAG 60.322 60.000 2.11 0.68 0.00 2.18
144 145 0.472925 TGCCCTGTGGTGACCTTAGA 60.473 55.000 2.11 0.00 0.00 2.10
145 146 0.690762 GCCCTGTGGTGACCTTAGAA 59.309 55.000 2.11 0.00 0.00 2.10
146 147 1.610886 GCCCTGTGGTGACCTTAGAAC 60.611 57.143 2.11 0.00 0.00 3.01
147 148 1.697432 CCCTGTGGTGACCTTAGAACA 59.303 52.381 2.11 0.00 0.00 3.18
148 149 2.105821 CCCTGTGGTGACCTTAGAACAA 59.894 50.000 2.11 0.00 0.00 2.83
149 150 3.403038 CCTGTGGTGACCTTAGAACAAG 58.597 50.000 2.11 0.00 0.00 3.16
150 151 3.181454 CCTGTGGTGACCTTAGAACAAGT 60.181 47.826 2.11 0.00 0.00 3.16
151 152 3.804036 TGTGGTGACCTTAGAACAAGTG 58.196 45.455 2.11 0.00 0.00 3.16
152 153 3.199071 TGTGGTGACCTTAGAACAAGTGT 59.801 43.478 2.11 0.00 0.00 3.55
153 154 3.808174 GTGGTGACCTTAGAACAAGTGTC 59.192 47.826 2.11 0.00 0.00 3.67
154 155 3.057734 GGTGACCTTAGAACAAGTGTCG 58.942 50.000 0.00 0.00 0.00 4.35
155 156 2.475487 GTGACCTTAGAACAAGTGTCGC 59.525 50.000 0.00 0.00 0.00 5.19
156 157 2.067013 GACCTTAGAACAAGTGTCGCC 58.933 52.381 0.00 0.00 0.00 5.54
157 158 1.270678 ACCTTAGAACAAGTGTCGCCC 60.271 52.381 0.00 0.00 0.00 6.13
158 159 1.270625 CCTTAGAACAAGTGTCGCCCA 60.271 52.381 0.00 0.00 0.00 5.36
159 160 1.798813 CTTAGAACAAGTGTCGCCCAC 59.201 52.381 0.00 0.00 44.89 4.61
180 181 3.643398 GGGGACGAGGGCATAGTT 58.357 61.111 0.00 0.00 0.00 2.24
181 182 2.830475 GGGGACGAGGGCATAGTTA 58.170 57.895 0.00 0.00 0.00 2.24
182 183 1.349067 GGGGACGAGGGCATAGTTAT 58.651 55.000 0.00 0.00 0.00 1.89
183 184 1.697982 GGGGACGAGGGCATAGTTATT 59.302 52.381 0.00 0.00 0.00 1.40
184 185 2.105993 GGGGACGAGGGCATAGTTATTT 59.894 50.000 0.00 0.00 0.00 1.40
185 186 3.325716 GGGGACGAGGGCATAGTTATTTA 59.674 47.826 0.00 0.00 0.00 1.40
186 187 4.019591 GGGGACGAGGGCATAGTTATTTAT 60.020 45.833 0.00 0.00 0.00 1.40
187 188 5.514310 GGGGACGAGGGCATAGTTATTTATT 60.514 44.000 0.00 0.00 0.00 1.40
188 189 6.002082 GGGACGAGGGCATAGTTATTTATTT 58.998 40.000 0.00 0.00 0.00 1.40
189 190 6.148976 GGGACGAGGGCATAGTTATTTATTTC 59.851 42.308 0.00 0.00 0.00 2.17
190 191 6.935208 GGACGAGGGCATAGTTATTTATTTCT 59.065 38.462 0.00 0.00 0.00 2.52
191 192 7.095187 GGACGAGGGCATAGTTATTTATTTCTG 60.095 40.741 0.00 0.00 0.00 3.02
192 193 6.710744 ACGAGGGCATAGTTATTTATTTCTGG 59.289 38.462 0.00 0.00 0.00 3.86
193 194 6.710744 CGAGGGCATAGTTATTTATTTCTGGT 59.289 38.462 0.00 0.00 0.00 4.00
194 195 7.307989 CGAGGGCATAGTTATTTATTTCTGGTG 60.308 40.741 0.00 0.00 0.00 4.17
195 196 6.265422 AGGGCATAGTTATTTATTTCTGGTGC 59.735 38.462 0.00 0.00 0.00 5.01
196 197 6.040391 GGGCATAGTTATTTATTTCTGGTGCA 59.960 38.462 0.00 0.00 0.00 4.57
197 198 7.255942 GGGCATAGTTATTTATTTCTGGTGCAT 60.256 37.037 0.00 0.00 0.00 3.96
198 199 7.809806 GGCATAGTTATTTATTTCTGGTGCATC 59.190 37.037 0.00 0.00 0.00 3.91
199 200 7.535258 GCATAGTTATTTATTTCTGGTGCATCG 59.465 37.037 0.00 0.00 0.00 3.84
200 201 8.559536 CATAGTTATTTATTTCTGGTGCATCGT 58.440 33.333 0.00 0.00 0.00 3.73
201 202 7.016361 AGTTATTTATTTCTGGTGCATCGTC 57.984 36.000 0.00 0.00 0.00 4.20
202 203 4.536364 ATTTATTTCTGGTGCATCGTCG 57.464 40.909 0.00 0.00 0.00 5.12
203 204 1.934589 TATTTCTGGTGCATCGTCGG 58.065 50.000 0.00 0.00 0.00 4.79
204 205 1.369091 ATTTCTGGTGCATCGTCGGC 61.369 55.000 0.00 0.00 0.00 5.54
205 206 2.723586 TTTCTGGTGCATCGTCGGCA 62.724 55.000 0.00 0.00 39.32 5.69
211 212 4.865761 GCATCGTCGGCACCGCTA 62.866 66.667 3.66 0.00 39.59 4.26
212 213 2.954868 CATCGTCGGCACCGCTAC 60.955 66.667 3.66 0.00 39.59 3.58
213 214 4.203076 ATCGTCGGCACCGCTACC 62.203 66.667 3.66 0.00 39.59 3.18
216 217 4.814294 GTCGGCACCGCTACCCAG 62.814 72.222 3.66 0.00 39.59 4.45
218 219 4.814294 CGGCACCGCTACCCAGAC 62.814 72.222 0.00 0.00 0.00 3.51
219 220 3.391382 GGCACCGCTACCCAGACT 61.391 66.667 0.00 0.00 0.00 3.24
220 221 2.056223 GGCACCGCTACCCAGACTA 61.056 63.158 0.00 0.00 0.00 2.59
221 222 1.610554 GGCACCGCTACCCAGACTAA 61.611 60.000 0.00 0.00 0.00 2.24
222 223 0.459759 GCACCGCTACCCAGACTAAC 60.460 60.000 0.00 0.00 0.00 2.34
223 224 0.892755 CACCGCTACCCAGACTAACA 59.107 55.000 0.00 0.00 0.00 2.41
224 225 1.274167 CACCGCTACCCAGACTAACAA 59.726 52.381 0.00 0.00 0.00 2.83
225 226 1.274447 ACCGCTACCCAGACTAACAAC 59.726 52.381 0.00 0.00 0.00 3.32
226 227 1.274167 CCGCTACCCAGACTAACAACA 59.726 52.381 0.00 0.00 0.00 3.33
227 228 2.093658 CCGCTACCCAGACTAACAACAT 60.094 50.000 0.00 0.00 0.00 2.71
228 229 2.930040 CGCTACCCAGACTAACAACATG 59.070 50.000 0.00 0.00 0.00 3.21
229 230 3.368013 CGCTACCCAGACTAACAACATGA 60.368 47.826 0.00 0.00 0.00 3.07
230 231 4.184629 GCTACCCAGACTAACAACATGAG 58.815 47.826 0.00 0.00 0.00 2.90
231 232 3.703001 ACCCAGACTAACAACATGAGG 57.297 47.619 0.00 0.00 0.00 3.86
232 233 2.290323 ACCCAGACTAACAACATGAGGC 60.290 50.000 0.00 0.00 0.00 4.70
233 234 2.359900 CCAGACTAACAACATGAGGCC 58.640 52.381 0.00 0.00 0.00 5.19
234 235 2.290260 CCAGACTAACAACATGAGGCCA 60.290 50.000 5.01 0.00 0.00 5.36
235 236 2.744202 CAGACTAACAACATGAGGCCAC 59.256 50.000 5.01 0.00 0.00 5.01
236 237 2.639839 AGACTAACAACATGAGGCCACT 59.360 45.455 5.01 0.00 0.00 4.00
237 238 3.838317 AGACTAACAACATGAGGCCACTA 59.162 43.478 5.01 0.00 0.00 2.74
238 239 4.081420 AGACTAACAACATGAGGCCACTAG 60.081 45.833 5.01 0.00 0.00 2.57
239 240 3.838317 ACTAACAACATGAGGCCACTAGA 59.162 43.478 5.01 0.00 0.00 2.43
240 241 3.788227 AACAACATGAGGCCACTAGAA 57.212 42.857 5.01 0.00 0.00 2.10
241 242 4.307032 AACAACATGAGGCCACTAGAAT 57.693 40.909 5.01 0.00 0.00 2.40
242 243 3.878778 ACAACATGAGGCCACTAGAATC 58.121 45.455 5.01 0.00 0.00 2.52
243 244 3.264193 ACAACATGAGGCCACTAGAATCA 59.736 43.478 5.01 0.00 0.00 2.57
244 245 4.080129 ACAACATGAGGCCACTAGAATCAT 60.080 41.667 5.01 0.00 0.00 2.45
245 246 4.348863 ACATGAGGCCACTAGAATCATC 57.651 45.455 5.01 0.00 0.00 2.92
246 247 3.713248 ACATGAGGCCACTAGAATCATCA 59.287 43.478 5.01 0.00 0.00 3.07
247 248 4.164796 ACATGAGGCCACTAGAATCATCAA 59.835 41.667 5.01 0.00 0.00 2.57
248 249 4.842531 TGAGGCCACTAGAATCATCAAA 57.157 40.909 5.01 0.00 0.00 2.69
249 250 5.378230 TGAGGCCACTAGAATCATCAAAT 57.622 39.130 5.01 0.00 0.00 2.32
250 251 5.759059 TGAGGCCACTAGAATCATCAAATT 58.241 37.500 5.01 0.00 0.00 1.82
251 252 5.591472 TGAGGCCACTAGAATCATCAAATTG 59.409 40.000 5.01 0.00 0.00 2.32
252 253 4.340381 AGGCCACTAGAATCATCAAATTGC 59.660 41.667 5.01 0.00 0.00 3.56
253 254 4.340381 GGCCACTAGAATCATCAAATTGCT 59.660 41.667 0.00 0.00 0.00 3.91
254 255 5.163478 GGCCACTAGAATCATCAAATTGCTT 60.163 40.000 0.00 0.00 0.00 3.91
255 256 5.975939 GCCACTAGAATCATCAAATTGCTTC 59.024 40.000 0.00 0.00 0.00 3.86
256 257 6.501781 CCACTAGAATCATCAAATTGCTTCC 58.498 40.000 0.00 0.00 0.00 3.46
257 258 6.320672 CCACTAGAATCATCAAATTGCTTCCT 59.679 38.462 0.00 0.00 0.00 3.36
258 259 7.416022 CACTAGAATCATCAAATTGCTTCCTC 58.584 38.462 0.00 0.00 0.00 3.71
259 260 5.848833 AGAATCATCAAATTGCTTCCTCC 57.151 39.130 0.00 0.00 0.00 4.30
260 261 4.337555 AGAATCATCAAATTGCTTCCTCCG 59.662 41.667 0.00 0.00 0.00 4.63
261 262 3.071874 TCATCAAATTGCTTCCTCCGT 57.928 42.857 0.00 0.00 0.00 4.69
262 263 3.009723 TCATCAAATTGCTTCCTCCGTC 58.990 45.455 0.00 0.00 0.00 4.79
263 264 2.859165 TCAAATTGCTTCCTCCGTCT 57.141 45.000 0.00 0.00 0.00 4.18
264 265 2.699954 TCAAATTGCTTCCTCCGTCTC 58.300 47.619 0.00 0.00 0.00 3.36
265 266 1.394917 CAAATTGCTTCCTCCGTCTCG 59.605 52.381 0.00 0.00 0.00 4.04
278 279 3.920112 CCGTCTCGGTTTATTAAGTGC 57.080 47.619 0.00 0.00 42.73 4.40
279 280 2.606272 CCGTCTCGGTTTATTAAGTGCC 59.394 50.000 0.00 0.00 42.73 5.01
280 281 2.606272 CGTCTCGGTTTATTAAGTGCCC 59.394 50.000 0.00 0.00 0.00 5.36
281 282 3.677976 CGTCTCGGTTTATTAAGTGCCCT 60.678 47.826 0.00 0.00 0.00 5.19
282 283 3.869832 GTCTCGGTTTATTAAGTGCCCTC 59.130 47.826 0.00 0.00 0.00 4.30
283 284 3.516300 TCTCGGTTTATTAAGTGCCCTCA 59.484 43.478 0.00 0.00 0.00 3.86
284 285 3.602483 TCGGTTTATTAAGTGCCCTCAC 58.398 45.455 0.00 0.00 43.44 3.51
285 286 3.008157 TCGGTTTATTAAGTGCCCTCACA 59.992 43.478 0.00 0.00 45.49 3.58
286 287 3.945285 CGGTTTATTAAGTGCCCTCACAT 59.055 43.478 0.00 0.00 45.49 3.21
287 288 4.398044 CGGTTTATTAAGTGCCCTCACATT 59.602 41.667 0.00 0.00 45.49 2.71
288 289 5.105917 CGGTTTATTAAGTGCCCTCACATTT 60.106 40.000 0.00 0.00 45.49 2.32
289 290 6.571537 CGGTTTATTAAGTGCCCTCACATTTT 60.572 38.462 0.00 0.00 45.49 1.82
290 291 6.811665 GGTTTATTAAGTGCCCTCACATTTTC 59.188 38.462 0.00 0.00 45.49 2.29
291 292 7.375053 GTTTATTAAGTGCCCTCACATTTTCA 58.625 34.615 0.00 0.00 45.49 2.69
292 293 7.531857 TTATTAAGTGCCCTCACATTTTCAA 57.468 32.000 0.00 0.00 45.49 2.69
293 294 6.610075 ATTAAGTGCCCTCACATTTTCAAT 57.390 33.333 0.00 0.00 45.49 2.57
294 295 4.961438 AAGTGCCCTCACATTTTCAATT 57.039 36.364 0.00 0.00 45.49 2.32
295 296 7.531857 TTAAGTGCCCTCACATTTTCAATTA 57.468 32.000 0.00 0.00 45.49 1.40
296 297 6.418057 AAGTGCCCTCACATTTTCAATTAA 57.582 33.333 0.00 0.00 45.49 1.40
297 298 6.418057 AGTGCCCTCACATTTTCAATTAAA 57.582 33.333 0.00 0.00 45.49 1.52
298 299 6.458210 AGTGCCCTCACATTTTCAATTAAAG 58.542 36.000 0.00 0.00 45.49 1.85
299 300 6.041979 AGTGCCCTCACATTTTCAATTAAAGT 59.958 34.615 0.00 0.00 45.49 2.66
300 301 6.705825 GTGCCCTCACATTTTCAATTAAAGTT 59.294 34.615 0.00 0.00 42.66 2.66
301 302 6.928492 TGCCCTCACATTTTCAATTAAAGTTC 59.072 34.615 0.00 0.00 0.00 3.01
302 303 6.368791 GCCCTCACATTTTCAATTAAAGTTCC 59.631 38.462 0.00 0.00 0.00 3.62
303 304 7.441017 CCCTCACATTTTCAATTAAAGTTCCA 58.559 34.615 0.00 0.00 0.00 3.53
304 305 7.384932 CCCTCACATTTTCAATTAAAGTTCCAC 59.615 37.037 0.00 0.00 0.00 4.02
305 306 7.384932 CCTCACATTTTCAATTAAAGTTCCACC 59.615 37.037 0.00 0.00 0.00 4.61
306 307 6.920758 TCACATTTTCAATTAAAGTTCCACCG 59.079 34.615 0.00 0.00 0.00 4.94
307 308 6.699642 CACATTTTCAATTAAAGTTCCACCGT 59.300 34.615 0.00 0.00 0.00 4.83
308 309 7.223777 CACATTTTCAATTAAAGTTCCACCGTT 59.776 33.333 0.00 0.00 0.00 4.44
309 310 7.436970 ACATTTTCAATTAAAGTTCCACCGTTC 59.563 33.333 0.00 0.00 0.00 3.95
310 311 4.735662 TCAATTAAAGTTCCACCGTTCG 57.264 40.909 0.00 0.00 0.00 3.95
311 312 4.128643 TCAATTAAAGTTCCACCGTTCGT 58.871 39.130 0.00 0.00 0.00 3.85
312 313 4.575645 TCAATTAAAGTTCCACCGTTCGTT 59.424 37.500 0.00 0.00 0.00 3.85
313 314 5.066246 TCAATTAAAGTTCCACCGTTCGTTT 59.934 36.000 0.00 0.00 0.00 3.60
314 315 6.259608 TCAATTAAAGTTCCACCGTTCGTTTA 59.740 34.615 0.00 0.00 0.00 2.01
315 316 6.806388 ATTAAAGTTCCACCGTTCGTTTAT 57.194 33.333 0.00 0.00 0.00 1.40
316 317 4.477302 AAAGTTCCACCGTTCGTTTATG 57.523 40.909 0.00 0.00 0.00 1.90
317 318 2.419667 AGTTCCACCGTTCGTTTATGG 58.580 47.619 0.00 0.00 0.00 2.74
318 319 2.037511 AGTTCCACCGTTCGTTTATGGA 59.962 45.455 0.00 0.00 37.68 3.41
319 320 2.807392 GTTCCACCGTTCGTTTATGGAA 59.193 45.455 0.00 0.00 45.07 3.53
320 321 3.337694 TCCACCGTTCGTTTATGGAAT 57.662 42.857 0.00 0.00 36.51 3.01
321 322 4.468765 TCCACCGTTCGTTTATGGAATA 57.531 40.909 0.00 0.00 36.51 1.75
322 323 4.829968 TCCACCGTTCGTTTATGGAATAA 58.170 39.130 0.00 0.00 36.51 1.40
323 324 5.243981 TCCACCGTTCGTTTATGGAATAAA 58.756 37.500 0.00 0.00 45.86 1.40
355 356 9.581289 TGGGTTATATGTAGGAAAAATGGTATG 57.419 33.333 0.00 0.00 0.00 2.39
356 357 9.020731 GGGTTATATGTAGGAAAAATGGTATGG 57.979 37.037 0.00 0.00 0.00 2.74
357 358 9.582648 GGTTATATGTAGGAAAAATGGTATGGT 57.417 33.333 0.00 0.00 0.00 3.55
360 361 6.693315 ATGTAGGAAAAATGGTATGGTTCG 57.307 37.500 0.00 0.00 0.00 3.95
361 362 5.806818 TGTAGGAAAAATGGTATGGTTCGA 58.193 37.500 0.00 0.00 0.00 3.71
362 363 5.644636 TGTAGGAAAAATGGTATGGTTCGAC 59.355 40.000 0.00 0.00 0.00 4.20
363 364 4.918588 AGGAAAAATGGTATGGTTCGACT 58.081 39.130 0.00 0.00 0.00 4.18
364 365 6.057321 AGGAAAAATGGTATGGTTCGACTA 57.943 37.500 0.00 0.00 0.00 2.59
365 366 5.878669 AGGAAAAATGGTATGGTTCGACTAC 59.121 40.000 0.00 0.00 0.00 2.73
366 367 5.644636 GGAAAAATGGTATGGTTCGACTACA 59.355 40.000 0.00 0.00 0.00 2.74
367 368 6.149807 GGAAAAATGGTATGGTTCGACTACAA 59.850 38.462 0.00 0.00 0.00 2.41
368 369 7.308710 GGAAAAATGGTATGGTTCGACTACAAA 60.309 37.037 0.00 0.00 0.00 2.83
369 370 6.490566 AAATGGTATGGTTCGACTACAAAC 57.509 37.500 0.00 0.00 0.00 2.93
370 371 4.603989 TGGTATGGTTCGACTACAAACA 57.396 40.909 0.00 0.00 0.00 2.83
371 372 4.958509 TGGTATGGTTCGACTACAAACAA 58.041 39.130 0.00 0.00 0.00 2.83
372 373 5.366460 TGGTATGGTTCGACTACAAACAAA 58.634 37.500 0.00 0.00 0.00 2.83
373 374 5.236911 TGGTATGGTTCGACTACAAACAAAC 59.763 40.000 0.00 0.00 0.00 2.93
374 375 3.929417 TGGTTCGACTACAAACAAACG 57.071 42.857 0.00 0.00 0.00 3.60
375 376 2.030701 TGGTTCGACTACAAACAAACGC 59.969 45.455 0.00 0.00 0.00 4.84
376 377 2.030701 GGTTCGACTACAAACAAACGCA 59.969 45.455 0.00 0.00 0.00 5.24
377 378 3.485546 GGTTCGACTACAAACAAACGCAA 60.486 43.478 0.00 0.00 0.00 4.85
378 379 4.276460 GTTCGACTACAAACAAACGCAAT 58.724 39.130 0.00 0.00 0.00 3.56
379 380 5.433855 GTTCGACTACAAACAAACGCAATA 58.566 37.500 0.00 0.00 0.00 1.90
380 381 5.654317 TCGACTACAAACAAACGCAATAA 57.346 34.783 0.00 0.00 0.00 1.40
381 382 6.230849 TCGACTACAAACAAACGCAATAAT 57.769 33.333 0.00 0.00 0.00 1.28
382 383 7.348808 TCGACTACAAACAAACGCAATAATA 57.651 32.000 0.00 0.00 0.00 0.98
383 384 7.966111 TCGACTACAAACAAACGCAATAATAT 58.034 30.769 0.00 0.00 0.00 1.28
384 385 9.085250 TCGACTACAAACAAACGCAATAATATA 57.915 29.630 0.00 0.00 0.00 0.86
385 386 9.858247 CGACTACAAACAAACGCAATAATATAT 57.142 29.630 0.00 0.00 0.00 0.86
432 433 5.835113 TTGCAAATTAGATACAAGGAGGC 57.165 39.130 0.00 0.00 0.00 4.70
433 434 4.207165 TGCAAATTAGATACAAGGAGGCC 58.793 43.478 0.00 0.00 0.00 5.19
434 435 4.207165 GCAAATTAGATACAAGGAGGCCA 58.793 43.478 5.01 0.00 0.00 5.36
435 436 4.829492 GCAAATTAGATACAAGGAGGCCAT 59.171 41.667 5.01 0.00 0.00 4.40
436 437 5.278660 GCAAATTAGATACAAGGAGGCCATG 60.279 44.000 5.01 0.21 0.00 3.66
437 438 3.492102 TTAGATACAAGGAGGCCATGC 57.508 47.619 5.01 0.00 0.00 4.06
438 439 1.516110 AGATACAAGGAGGCCATGCT 58.484 50.000 5.01 0.00 0.00 3.79
439 440 1.419387 AGATACAAGGAGGCCATGCTC 59.581 52.381 5.01 0.00 0.00 4.26
440 441 0.475906 ATACAAGGAGGCCATGCTCC 59.524 55.000 5.01 10.54 39.93 4.70
441 442 1.635817 TACAAGGAGGCCATGCTCCC 61.636 60.000 13.94 2.08 40.49 4.30
442 443 2.286732 AAGGAGGCCATGCTCCCT 60.287 61.111 13.94 6.63 40.49 4.20
443 444 1.004758 AAGGAGGCCATGCTCCCTA 59.995 57.895 13.94 0.00 40.49 3.53
444 445 1.059006 AAGGAGGCCATGCTCCCTAG 61.059 60.000 13.94 0.00 40.49 3.02
445 446 1.460305 GGAGGCCATGCTCCCTAGA 60.460 63.158 5.01 0.00 33.81 2.43
446 447 1.056700 GGAGGCCATGCTCCCTAGAA 61.057 60.000 5.01 0.00 33.81 2.10
447 448 1.063183 GAGGCCATGCTCCCTAGAAT 58.937 55.000 5.01 0.00 0.00 2.40
448 449 1.003003 GAGGCCATGCTCCCTAGAATC 59.997 57.143 5.01 0.00 0.00 2.52
449 450 0.037447 GGCCATGCTCCCTAGAATCC 59.963 60.000 0.00 0.00 0.00 3.01
450 451 0.037447 GCCATGCTCCCTAGAATCCC 59.963 60.000 0.00 0.00 0.00 3.85
451 452 1.739750 CCATGCTCCCTAGAATCCCT 58.260 55.000 0.00 0.00 0.00 4.20
452 453 1.627834 CCATGCTCCCTAGAATCCCTC 59.372 57.143 0.00 0.00 0.00 4.30
453 454 1.627834 CATGCTCCCTAGAATCCCTCC 59.372 57.143 0.00 0.00 0.00 4.30
454 455 0.944999 TGCTCCCTAGAATCCCTCCT 59.055 55.000 0.00 0.00 0.00 3.69
455 456 1.295292 TGCTCCCTAGAATCCCTCCTT 59.705 52.381 0.00 0.00 0.00 3.36
456 457 1.696884 GCTCCCTAGAATCCCTCCTTG 59.303 57.143 0.00 0.00 0.00 3.61
457 458 1.696884 CTCCCTAGAATCCCTCCTTGC 59.303 57.143 0.00 0.00 0.00 4.01
458 459 0.394565 CCCTAGAATCCCTCCTTGCG 59.605 60.000 0.00 0.00 0.00 4.85
459 460 0.394565 CCTAGAATCCCTCCTTGCGG 59.605 60.000 0.00 0.00 0.00 5.69
460 461 0.250081 CTAGAATCCCTCCTTGCGGC 60.250 60.000 0.00 0.00 0.00 6.53
461 462 0.980754 TAGAATCCCTCCTTGCGGCA 60.981 55.000 0.00 0.00 0.00 5.69
462 463 1.378514 GAATCCCTCCTTGCGGCAA 60.379 57.895 15.55 15.55 0.00 4.52
463 464 1.379044 AATCCCTCCTTGCGGCAAG 60.379 57.895 30.80 30.80 40.75 4.01
464 465 2.142292 AATCCCTCCTTGCGGCAAGT 62.142 55.000 33.50 16.71 39.58 3.16
465 466 1.271840 ATCCCTCCTTGCGGCAAGTA 61.272 55.000 33.50 22.18 39.58 2.24
466 467 1.450312 CCCTCCTTGCGGCAAGTAG 60.450 63.158 33.50 28.67 39.58 2.57
467 468 1.450312 CCTCCTTGCGGCAAGTAGG 60.450 63.158 31.48 31.48 40.26 3.18
468 469 2.046314 TCCTTGCGGCAAGTAGGC 60.046 61.111 33.50 0.00 39.58 3.93
476 477 3.694746 GCAAGTAGGCCCCCAAAC 58.305 61.111 0.00 0.00 0.00 2.93
477 478 1.076727 GCAAGTAGGCCCCCAAACT 59.923 57.895 0.00 0.00 0.00 2.66
478 479 1.250840 GCAAGTAGGCCCCCAAACTG 61.251 60.000 0.00 0.00 0.00 3.16
479 480 1.076727 AAGTAGGCCCCCAAACTGC 59.923 57.895 0.00 0.00 0.00 4.40
480 481 2.750237 GTAGGCCCCCAAACTGCG 60.750 66.667 0.00 0.00 0.00 5.18
481 482 4.733542 TAGGCCCCCAAACTGCGC 62.734 66.667 0.00 0.00 0.00 6.09
485 486 4.994756 CCCCCAAACTGCGCCCTT 62.995 66.667 4.18 0.00 0.00 3.95
486 487 3.373565 CCCCAAACTGCGCCCTTC 61.374 66.667 4.18 0.00 0.00 3.46
487 488 3.737172 CCCAAACTGCGCCCTTCG 61.737 66.667 4.18 0.00 42.12 3.79
500 501 4.641645 CTTCGCCACCCTGCACCA 62.642 66.667 0.00 0.00 0.00 4.17
501 502 4.641645 TTCGCCACCCTGCACCAG 62.642 66.667 0.00 0.00 0.00 4.00
512 513 4.660938 GCACCAGGCGAAGGGGTT 62.661 66.667 0.00 0.00 31.03 4.11
513 514 2.115266 CACCAGGCGAAGGGGTTT 59.885 61.111 0.00 0.00 31.03 3.27
514 515 1.377229 CACCAGGCGAAGGGGTTTA 59.623 57.895 0.00 0.00 31.03 2.01
515 516 0.250989 CACCAGGCGAAGGGGTTTAA 60.251 55.000 0.00 0.00 31.03 1.52
516 517 0.702316 ACCAGGCGAAGGGGTTTAAT 59.298 50.000 0.00 0.00 0.00 1.40
517 518 1.076513 ACCAGGCGAAGGGGTTTAATT 59.923 47.619 0.00 0.00 0.00 1.40
518 519 2.176045 CCAGGCGAAGGGGTTTAATTT 58.824 47.619 0.00 0.00 0.00 1.82
519 520 2.565391 CCAGGCGAAGGGGTTTAATTTT 59.435 45.455 0.00 0.00 0.00 1.82
520 521 3.007506 CCAGGCGAAGGGGTTTAATTTTT 59.992 43.478 0.00 0.00 0.00 1.94
521 522 3.993736 CAGGCGAAGGGGTTTAATTTTTG 59.006 43.478 0.00 0.00 0.00 2.44
522 523 3.007506 AGGCGAAGGGGTTTAATTTTTGG 59.992 43.478 0.00 0.00 0.00 3.28
523 524 3.007074 GGCGAAGGGGTTTAATTTTTGGA 59.993 43.478 0.00 0.00 0.00 3.53
524 525 4.242475 GCGAAGGGGTTTAATTTTTGGAG 58.758 43.478 0.00 0.00 0.00 3.86
525 526 4.021807 GCGAAGGGGTTTAATTTTTGGAGA 60.022 41.667 0.00 0.00 0.00 3.71
526 527 5.709966 CGAAGGGGTTTAATTTTTGGAGAG 58.290 41.667 0.00 0.00 0.00 3.20
527 528 5.479306 GAAGGGGTTTAATTTTTGGAGAGC 58.521 41.667 0.00 0.00 0.00 4.09
528 529 3.509967 AGGGGTTTAATTTTTGGAGAGCG 59.490 43.478 0.00 0.00 0.00 5.03
529 530 3.250744 GGGTTTAATTTTTGGAGAGCGC 58.749 45.455 0.00 0.00 0.00 5.92
530 531 3.250744 GGTTTAATTTTTGGAGAGCGCC 58.749 45.455 2.29 0.00 0.00 6.53
531 532 3.056821 GGTTTAATTTTTGGAGAGCGCCT 60.057 43.478 2.29 0.00 0.00 5.52
532 533 4.166523 GTTTAATTTTTGGAGAGCGCCTC 58.833 43.478 15.12 15.12 41.22 4.70
533 534 0.804989 AATTTTTGGAGAGCGCCTCG 59.195 50.000 16.39 0.00 42.89 4.63
534 535 0.036388 ATTTTTGGAGAGCGCCTCGA 60.036 50.000 16.39 11.72 42.89 4.04
535 536 0.949105 TTTTTGGAGAGCGCCTCGAC 60.949 55.000 16.39 7.27 42.89 4.20
536 537 3.626680 TTTGGAGAGCGCCTCGACG 62.627 63.158 16.39 0.00 42.89 5.12
538 539 4.539881 GGAGAGCGCCTCGACGAC 62.540 72.222 16.39 2.76 42.89 4.34
539 540 4.872485 GAGAGCGCCTCGACGACG 62.872 72.222 2.29 0.00 41.26 5.12
547 548 4.447069 CTCGACGACGCGACTGCT 62.447 66.667 15.93 0.00 39.65 4.24
548 549 4.440987 TCGACGACGCGACTGCTC 62.441 66.667 15.93 0.00 39.65 4.26
557 558 4.421479 CGACTGCTCGCCTCGGTT 62.421 66.667 0.00 0.00 31.91 4.44
558 559 2.507324 GACTGCTCGCCTCGGTTC 60.507 66.667 0.00 0.00 0.00 3.62
559 560 3.991536 GACTGCTCGCCTCGGTTCC 62.992 68.421 0.00 0.00 0.00 3.62
560 561 4.069232 CTGCTCGCCTCGGTTCCA 62.069 66.667 0.00 0.00 0.00 3.53
561 562 4.373116 TGCTCGCCTCGGTTCCAC 62.373 66.667 0.00 0.00 0.00 4.02
563 564 3.744719 CTCGCCTCGGTTCCACGA 61.745 66.667 0.00 0.00 41.13 4.35
564 565 3.277211 CTCGCCTCGGTTCCACGAA 62.277 63.158 0.00 0.00 42.98 3.85
565 566 3.110178 CGCCTCGGTTCCACGAAC 61.110 66.667 0.00 0.00 42.98 3.95
566 567 2.342648 GCCTCGGTTCCACGAACT 59.657 61.111 4.65 0.00 42.98 3.01
567 568 1.737008 GCCTCGGTTCCACGAACTC 60.737 63.158 4.65 0.00 42.98 3.01
568 569 1.443872 CCTCGGTTCCACGAACTCG 60.444 63.158 4.65 0.00 42.98 4.18
569 570 1.577922 CTCGGTTCCACGAACTCGA 59.422 57.895 6.05 13.55 42.98 4.04
570 571 0.728466 CTCGGTTCCACGAACTCGAC 60.728 60.000 6.05 0.00 42.98 4.20
571 572 1.168407 TCGGTTCCACGAACTCGACT 61.168 55.000 6.05 0.00 41.70 4.18
572 573 0.518636 CGGTTCCACGAACTCGACTA 59.481 55.000 6.05 0.00 41.70 2.59
573 574 1.465354 CGGTTCCACGAACTCGACTAG 60.465 57.143 6.05 0.00 41.70 2.57
574 575 1.538950 GGTTCCACGAACTCGACTAGT 59.461 52.381 6.05 0.00 41.70 2.57
585 586 4.442375 ACTCGACTAGTTCCATGACTTG 57.558 45.455 0.00 0.00 33.35 3.16
586 587 4.322049 AACTCGACTAGTTCCATGACTTGG 60.322 45.833 0.00 0.80 45.64 3.61
601 602 7.313951 CATGACTTGGACTCCTAAAGATTTC 57.686 40.000 2.80 0.00 0.00 2.17
602 603 5.479306 TGACTTGGACTCCTAAAGATTTCG 58.521 41.667 2.80 0.00 0.00 3.46
603 604 4.254492 ACTTGGACTCCTAAAGATTTCGC 58.746 43.478 2.80 0.00 0.00 4.70
604 605 3.261981 TGGACTCCTAAAGATTTCGCC 57.738 47.619 0.00 0.00 0.00 5.54
605 606 2.202566 GGACTCCTAAAGATTTCGCCG 58.797 52.381 0.00 0.00 0.00 6.46
606 607 2.159142 GGACTCCTAAAGATTTCGCCGA 60.159 50.000 0.00 0.00 0.00 5.54
607 608 2.858941 GACTCCTAAAGATTTCGCCGAC 59.141 50.000 0.00 0.00 0.00 4.79
608 609 2.202566 CTCCTAAAGATTTCGCCGACC 58.797 52.381 0.00 0.00 0.00 4.79
609 610 1.829222 TCCTAAAGATTTCGCCGACCT 59.171 47.619 0.00 0.00 0.00 3.85
610 611 2.159142 TCCTAAAGATTTCGCCGACCTC 60.159 50.000 0.00 0.00 0.00 3.85
611 612 1.852895 CTAAAGATTTCGCCGACCTCG 59.147 52.381 0.00 0.00 39.44 4.63
612 613 1.359459 AAAGATTTCGCCGACCTCGC 61.359 55.000 0.00 0.00 38.18 5.03
613 614 3.262686 GATTTCGCCGACCTCGCC 61.263 66.667 0.00 0.00 38.18 5.54
614 615 4.077184 ATTTCGCCGACCTCGCCA 62.077 61.111 0.00 0.00 38.18 5.69
622 623 4.736896 GACCTCGCCACGGGTGAC 62.737 72.222 0.00 0.00 37.29 3.67
624 625 3.066190 CCTCGCCACGGGTGACTA 61.066 66.667 0.00 0.00 37.29 2.59
625 626 2.423898 CCTCGCCACGGGTGACTAT 61.424 63.158 0.00 0.00 37.29 2.12
626 627 1.226974 CTCGCCACGGGTGACTATG 60.227 63.158 0.00 0.00 37.29 2.23
627 628 2.890474 CGCCACGGGTGACTATGC 60.890 66.667 0.00 0.00 34.74 3.14
628 629 2.584608 GCCACGGGTGACTATGCT 59.415 61.111 0.00 0.00 0.00 3.79
629 630 1.815421 GCCACGGGTGACTATGCTG 60.815 63.158 0.00 0.00 0.00 4.41
630 631 1.153369 CCACGGGTGACTATGCTGG 60.153 63.158 0.00 0.00 0.00 4.85
631 632 1.815421 CACGGGTGACTATGCTGGC 60.815 63.158 0.00 0.00 0.00 4.85
632 633 2.586079 CGGGTGACTATGCTGGCG 60.586 66.667 0.00 0.00 0.00 5.69
633 634 2.897350 GGGTGACTATGCTGGCGC 60.897 66.667 0.00 0.00 0.00 6.53
634 635 2.897350 GGTGACTATGCTGGCGCC 60.897 66.667 22.73 22.73 34.43 6.53
635 636 3.264897 GTGACTATGCTGGCGCCG 61.265 66.667 23.90 17.75 34.43 6.46
648 649 3.708734 CGCCGCGAAGAACCGTTT 61.709 61.111 8.23 0.00 0.00 3.60
649 650 2.635338 GCCGCGAAGAACCGTTTT 59.365 55.556 8.23 0.00 0.00 2.43
650 651 1.009335 GCCGCGAAGAACCGTTTTT 60.009 52.632 8.23 0.00 0.00 1.94
672 673 8.586879 TTTTTCCAAAAACCAAAATGAATCCT 57.413 26.923 0.00 0.00 33.29 3.24
673 674 9.686683 TTTTTCCAAAAACCAAAATGAATCCTA 57.313 25.926 0.00 0.00 33.29 2.94
674 675 9.859152 TTTTCCAAAAACCAAAATGAATCCTAT 57.141 25.926 0.00 0.00 0.00 2.57
675 676 8.845413 TTCCAAAAACCAAAATGAATCCTATG 57.155 30.769 0.00 0.00 0.00 2.23
676 677 7.393216 TCCAAAAACCAAAATGAATCCTATGG 58.607 34.615 0.00 0.00 0.00 2.74
677 678 6.598850 CCAAAAACCAAAATGAATCCTATGGG 59.401 38.462 0.00 0.00 32.21 4.00
678 679 7.393216 CAAAAACCAAAATGAATCCTATGGGA 58.607 34.615 0.00 0.00 46.81 4.37
679 680 6.796785 AAACCAAAATGAATCCTATGGGAG 57.203 37.500 3.45 0.00 45.86 4.30
680 681 5.472301 ACCAAAATGAATCCTATGGGAGT 57.528 39.130 3.45 0.00 45.86 3.85
681 682 5.203528 ACCAAAATGAATCCTATGGGAGTG 58.796 41.667 1.54 0.00 45.86 3.51
682 683 4.038402 CCAAAATGAATCCTATGGGAGTGC 59.962 45.833 1.54 0.00 45.86 4.40
683 684 4.524802 AAATGAATCCTATGGGAGTGCA 57.475 40.909 1.54 1.15 45.86 4.57
684 685 3.498774 ATGAATCCTATGGGAGTGCAC 57.501 47.619 9.40 9.40 45.86 4.57
685 686 1.138859 TGAATCCTATGGGAGTGCACG 59.861 52.381 12.01 0.00 45.86 5.34
686 687 1.412710 GAATCCTATGGGAGTGCACGA 59.587 52.381 12.01 0.00 45.86 4.35
687 688 0.753262 ATCCTATGGGAGTGCACGAC 59.247 55.000 12.01 9.80 45.86 4.34
688 689 1.144057 CCTATGGGAGTGCACGACC 59.856 63.158 21.45 21.45 33.58 4.79
689 690 1.144057 CTATGGGAGTGCACGACCC 59.856 63.158 33.18 33.18 43.51 4.46
690 691 2.311688 CTATGGGAGTGCACGACCCC 62.312 65.000 34.91 31.31 42.65 4.95
816 817 0.534877 ATCACGTCCAGCAAGCACAA 60.535 50.000 0.00 0.00 0.00 3.33
817 818 1.159713 TCACGTCCAGCAAGCACAAG 61.160 55.000 0.00 0.00 0.00 3.16
844 845 0.670546 CGCAGACGGTCCAGATGTTT 60.671 55.000 4.14 0.00 34.97 2.83
854 855 0.452987 CCAGATGTTTGCGGTCCATG 59.547 55.000 0.00 0.00 0.00 3.66
884 885 1.615424 GGGTCCTCCTTACTGCCCA 60.615 63.158 0.00 0.00 36.25 5.36
948 953 0.346574 TCCTCCCCATTCCCATCTCA 59.653 55.000 0.00 0.00 0.00 3.27
971 983 2.784356 CCCAGCGCAGAGAGAGAGG 61.784 68.421 11.47 0.00 0.00 3.69
1176 1188 4.421554 CCCTGGCCTCCTCCCTCA 62.422 72.222 3.32 0.00 0.00 3.86
1201 1221 2.081212 CGTCTGCAGGTCGTTCGTC 61.081 63.158 15.13 0.00 0.00 4.20
1212 1232 2.098870 GTCGTTCGTCTGTTTGTTTGC 58.901 47.619 0.00 0.00 0.00 3.68
1214 1234 2.417239 TCGTTCGTCTGTTTGTTTGCTT 59.583 40.909 0.00 0.00 0.00 3.91
1215 1235 2.525891 CGTTCGTCTGTTTGTTTGCTTG 59.474 45.455 0.00 0.00 0.00 4.01
1216 1236 3.726486 CGTTCGTCTGTTTGTTTGCTTGA 60.726 43.478 0.00 0.00 0.00 3.02
1221 1241 4.977963 CGTCTGTTTGTTTGCTTGATTGAT 59.022 37.500 0.00 0.00 0.00 2.57
1225 1245 7.010367 GTCTGTTTGTTTGCTTGATTGATTGAA 59.990 33.333 0.00 0.00 0.00 2.69
1374 1398 3.296516 CGAGGTACGAACGTGGTAC 57.703 57.895 17.40 17.40 45.77 3.34
1378 1402 3.702478 GTACGAACGTGGTACCTCC 57.298 57.895 14.36 2.64 35.36 4.30
1381 1405 2.277591 CGAACGTGGTACCTCCCCA 61.278 63.158 14.36 0.00 34.77 4.96
1382 1406 1.818959 CGAACGTGGTACCTCCCCAA 61.819 60.000 14.36 0.00 32.72 4.12
1395 1419 0.326927 TCCCCAAGCTAAGGGTTTCG 59.673 55.000 19.75 7.40 45.28 3.46
1440 1464 6.845758 TTTTGCCTTCATTCAGATTCAGAT 57.154 33.333 0.00 0.00 0.00 2.90
1441 1465 6.446781 TTTGCCTTCATTCAGATTCAGATC 57.553 37.500 0.00 0.00 0.00 2.75
1461 1485 7.285629 TCAGATCAGATACTAACCGAAGAATGT 59.714 37.037 0.00 0.00 0.00 2.71
1509 1533 6.780522 TGTGTAGGATACCTATGCTGACATTA 59.219 38.462 0.00 0.00 42.12 1.90
1544 1568 0.759346 GGGGGTAATCATGTCTCGCT 59.241 55.000 0.00 0.00 0.00 4.93
1556 1580 1.819288 TGTCTCGCTCGATTCTTCCTT 59.181 47.619 0.00 0.00 0.00 3.36
1581 1605 3.796717 CAGCGAGCATTTGATTCGTACTA 59.203 43.478 0.00 0.00 36.74 1.82
1582 1606 4.045104 AGCGAGCATTTGATTCGTACTAG 58.955 43.478 0.00 0.00 36.74 2.57
1583 1607 3.797256 GCGAGCATTTGATTCGTACTAGT 59.203 43.478 0.00 0.00 36.74 2.57
1584 1608 4.974275 GCGAGCATTTGATTCGTACTAGTA 59.026 41.667 0.00 0.00 36.74 1.82
1585 1609 5.108330 GCGAGCATTTGATTCGTACTAGTAC 60.108 44.000 21.06 21.06 36.74 2.73
1587 1611 6.637254 CGAGCATTTGATTCGTACTAGTACAT 59.363 38.462 28.03 17.25 35.87 2.29
1589 1613 9.459640 GAGCATTTGATTCGTACTAGTACATTA 57.540 33.333 28.03 15.14 35.87 1.90
1591 1615 9.845305 GCATTTGATTCGTACTAGTACATTAAC 57.155 33.333 28.03 16.55 35.87 2.01
1595 1619 9.999009 TTGATTCGTACTAGTACATTAACTCTG 57.001 33.333 28.03 11.81 35.87 3.35
1596 1620 9.170734 TGATTCGTACTAGTACATTAACTCTGT 57.829 33.333 28.03 7.80 35.87 3.41
1599 1623 9.831737 TTCGTACTAGTACATTAACTCTGTTTC 57.168 33.333 28.03 0.73 35.87 2.78
1600 1624 9.224267 TCGTACTAGTACATTAACTCTGTTTCT 57.776 33.333 28.03 0.00 35.87 2.52
1601 1625 9.837525 CGTACTAGTACATTAACTCTGTTTCTT 57.162 33.333 28.03 0.00 35.87 2.52
1607 1631 9.614792 AGTACATTAACTCTGTTTCTTTGTTCT 57.385 29.630 0.00 0.00 0.00 3.01
1612 1636 8.980143 TTAACTCTGTTTCTTTGTTCTTTTGG 57.020 30.769 0.00 0.00 0.00 3.28
1613 1637 6.834168 ACTCTGTTTCTTTGTTCTTTTGGA 57.166 33.333 0.00 0.00 0.00 3.53
1614 1638 7.410120 ACTCTGTTTCTTTGTTCTTTTGGAT 57.590 32.000 0.00 0.00 0.00 3.41
1635 1659 5.979517 GGATCTCTGTTTCTTGGTTGTTTTG 59.020 40.000 0.00 0.00 0.00 2.44
1649 1673 0.035439 GTTTTGGATCGAGCAGGGGA 60.035 55.000 1.84 0.00 0.00 4.81
1716 1743 0.673956 GACCGAAGAAGCCAGAACCC 60.674 60.000 0.00 0.00 0.00 4.11
1729 1756 1.602323 GAACCCATGCCACCGACAA 60.602 57.895 0.00 0.00 0.00 3.18
1899 1926 3.024609 CGATGATCGTCGGGTGCG 61.025 66.667 26.28 3.36 37.94 5.34
1917 1953 1.947456 GCGGGTTTGGATGGATTACTC 59.053 52.381 0.00 0.00 0.00 2.59
1963 3249 1.138247 CAAGCATCTCCCAAAGCGC 59.862 57.895 0.00 0.00 0.00 5.92
1990 3276 2.237143 GTGGATCACTCTGGTGGATGAA 59.763 50.000 0.00 0.00 43.17 2.57
2022 3308 3.350833 AGTCCGATTCGTACTACCTTGT 58.649 45.455 2.12 0.00 0.00 3.16
2053 3339 2.435586 CTCAGCGCCCAGTGGAAG 60.436 66.667 11.95 5.01 0.00 3.46
2148 3434 6.446318 TCAAGGTGAGATTTTAACATGTTGC 58.554 36.000 21.42 5.40 0.00 4.17
2149 3435 6.040278 TCAAGGTGAGATTTTAACATGTTGCA 59.960 34.615 21.42 4.76 0.00 4.08
2150 3436 6.594788 AGGTGAGATTTTAACATGTTGCAT 57.405 33.333 21.42 9.70 0.00 3.96
2151 3437 6.996509 AGGTGAGATTTTAACATGTTGCATT 58.003 32.000 21.42 3.61 0.00 3.56
2152 3438 7.092716 AGGTGAGATTTTAACATGTTGCATTC 58.907 34.615 21.42 12.19 0.00 2.67
2153 3439 6.311200 GGTGAGATTTTAACATGTTGCATTCC 59.689 38.462 21.42 7.94 0.00 3.01
2154 3440 6.311200 GTGAGATTTTAACATGTTGCATTCCC 59.689 38.462 21.42 6.37 0.00 3.97
2155 3441 6.211184 TGAGATTTTAACATGTTGCATTCCCT 59.789 34.615 21.42 8.97 0.00 4.20
2156 3442 6.633856 AGATTTTAACATGTTGCATTCCCTC 58.366 36.000 21.42 6.95 0.00 4.30
2157 3443 5.798125 TTTTAACATGTTGCATTCCCTCA 57.202 34.783 21.42 0.00 0.00 3.86
2158 3444 5.798125 TTTAACATGTTGCATTCCCTCAA 57.202 34.783 21.42 0.14 0.00 3.02
2159 3445 5.999205 TTAACATGTTGCATTCCCTCAAT 57.001 34.783 21.42 0.00 0.00 2.57
2160 3446 7.473735 TTTAACATGTTGCATTCCCTCAATA 57.526 32.000 21.42 0.00 0.00 1.90
2161 3447 7.658525 TTAACATGTTGCATTCCCTCAATAT 57.341 32.000 21.42 0.00 0.00 1.28
2162 3448 5.524971 ACATGTTGCATTCCCTCAATATG 57.475 39.130 0.00 9.19 43.13 1.78
2163 3449 4.342951 ACATGTTGCATTCCCTCAATATGG 59.657 41.667 13.44 0.00 42.37 2.74
2203 3508 8.621532 TGGAACTTTGTATATCTATGGAATGC 57.378 34.615 0.00 0.00 0.00 3.56
2269 3574 0.388391 ATTGCGTTCCAAATGGCGTG 60.388 50.000 0.00 0.00 36.92 5.34
2282 3594 5.049405 CCAAATGGCGTGTTAGGATTATCTC 60.049 44.000 0.00 0.00 0.00 2.75
2294 3606 7.707035 TGTTAGGATTATCTCGAAGCTTTCTTC 59.293 37.037 0.00 0.00 44.03 2.87
2341 3653 9.673454 CATTATCATGAATGTTCCACACTATTG 57.327 33.333 0.00 0.00 33.01 1.90
2342 3654 8.806429 TTATCATGAATGTTCCACACTATTGT 57.194 30.769 0.00 0.00 35.84 2.71
2343 3655 9.898152 TTATCATGAATGTTCCACACTATTGTA 57.102 29.630 0.00 0.00 33.30 2.41
2344 3656 7.609760 TCATGAATGTTCCACACTATTGTAC 57.390 36.000 0.00 0.00 33.30 2.90
2345 3657 7.164803 TCATGAATGTTCCACACTATTGTACA 58.835 34.615 0.00 0.00 33.30 2.90
2346 3658 6.795098 TGAATGTTCCACACTATTGTACAC 57.205 37.500 0.00 0.00 33.30 2.90
2348 3660 4.967084 TGTTCCACACTATTGTACACCT 57.033 40.909 0.00 0.00 33.30 4.00
2349 3661 6.614694 ATGTTCCACACTATTGTACACCTA 57.385 37.500 0.00 0.00 33.30 3.08
2352 3664 7.281098 TGTTCCACACTATTGTACACCTAAAA 58.719 34.615 0.00 0.00 33.30 1.52
2380 3702 9.320295 AGTTGATTGAGTTAATTTATGGGGAAA 57.680 29.630 0.00 0.00 0.00 3.13
2440 3762 1.906574 TGGTCCTCTGTGGTCCATTAC 59.093 52.381 10.08 0.00 46.53 1.89
2446 3768 2.736721 CTCTGTGGTCCATTACGTTGTG 59.263 50.000 0.00 0.00 0.00 3.33
2448 3770 1.161843 GTGGTCCATTACGTTGTGGG 58.838 55.000 16.12 4.38 36.15 4.61
2450 3772 1.270947 TGGTCCATTACGTTGTGGGAC 60.271 52.381 16.12 15.94 45.68 4.46
2452 3774 0.037139 TCCATTACGTTGTGGGACGG 60.037 55.000 16.12 0.00 46.77 4.79
2453 3775 0.037139 CCATTACGTTGTGGGACGGA 60.037 55.000 10.22 0.00 46.77 4.69
2454 3776 1.355971 CATTACGTTGTGGGACGGAG 58.644 55.000 0.00 0.00 46.77 4.63
2455 3777 0.248289 ATTACGTTGTGGGACGGAGG 59.752 55.000 0.00 0.00 46.77 4.30
2456 3778 1.818959 TTACGTTGTGGGACGGAGGG 61.819 60.000 0.00 0.00 46.77 4.30
2457 3779 2.711883 TACGTTGTGGGACGGAGGGA 62.712 60.000 0.00 0.00 46.77 4.20
2458 3780 2.663196 GTTGTGGGACGGAGGGAG 59.337 66.667 0.00 0.00 0.00 4.30
2459 3781 2.203182 TTGTGGGACGGAGGGAGT 59.797 61.111 0.00 0.00 0.00 3.85
2460 3782 0.901580 GTTGTGGGACGGAGGGAGTA 60.902 60.000 0.00 0.00 0.00 2.59
2461 3783 0.613853 TTGTGGGACGGAGGGAGTAG 60.614 60.000 0.00 0.00 0.00 2.57
2462 3784 1.305623 GTGGGACGGAGGGAGTAGA 59.694 63.158 0.00 0.00 0.00 2.59
2463 3785 0.106116 GTGGGACGGAGGGAGTAGAT 60.106 60.000 0.00 0.00 0.00 1.98
2464 3786 0.635009 TGGGACGGAGGGAGTAGATT 59.365 55.000 0.00 0.00 0.00 2.40
2466 3788 2.245546 TGGGACGGAGGGAGTAGATTTA 59.754 50.000 0.00 0.00 0.00 1.40
2470 3792 5.163227 GGGACGGAGGGAGTAGATTTAAAAT 60.163 44.000 0.00 0.00 0.00 1.82
2497 3819 3.898517 GTGGAGCCACAGTTTTACTTC 57.101 47.619 14.53 0.00 45.53 3.01
2502 3824 3.139077 AGCCACAGTTTTACTTCCGAAG 58.861 45.455 6.59 6.59 0.00 3.79
2591 3924 7.499232 GGAAGCATTACTATACAACAACATCCT 59.501 37.037 0.00 0.00 0.00 3.24
2592 3925 7.792374 AGCATTACTATACAACAACATCCTG 57.208 36.000 0.00 0.00 0.00 3.86
2593 3926 7.564793 AGCATTACTATACAACAACATCCTGA 58.435 34.615 0.00 0.00 0.00 3.86
2623 3958 5.745312 TTCCTTCATTCTAAGCAGACTCA 57.255 39.130 0.00 0.00 0.00 3.41
2625 3960 6.305272 TCCTTCATTCTAAGCAGACTCAAT 57.695 37.500 0.00 0.00 0.00 2.57
2668 4016 2.239654 CCTTGGAGCCTCCTTGTGATTA 59.760 50.000 12.94 0.00 37.46 1.75
2755 4179 7.327975 CCTCTGTTATGTCTAACCATGTGTAA 58.672 38.462 0.00 0.00 37.09 2.41
2772 4196 6.978343 TGTGTAACACTGCTAATAATGGAC 57.022 37.500 0.00 0.00 45.67 4.02
2778 4202 4.101741 ACACTGCTAATAATGGACCCTCTC 59.898 45.833 0.00 0.00 0.00 3.20
2805 4229 2.811410 ACATGATGCAGGTCCACATTT 58.189 42.857 0.00 0.00 0.00 2.32
2852 4276 2.608623 TGACTGATGAGGGTGTGAGAA 58.391 47.619 0.00 0.00 0.00 2.87
3006 4444 9.522804 TTGTGAAACTTGTGTTTTATTACCATC 57.477 29.630 0.00 0.00 45.36 3.51
3016 4454 8.670135 TGTGTTTTATTACCATCTATTCAACCG 58.330 33.333 0.00 0.00 0.00 4.44
3038 4476 3.304726 GCAACTTAACTCTGTTTCCTGCC 60.305 47.826 0.00 0.00 0.00 4.85
3102 6055 7.364149 TGCCAAATTTCTATATCTGCCAAAT 57.636 32.000 0.00 0.00 0.00 2.32
3121 6074 6.405731 GCCAAATTAGTTGATTACATGCCAGA 60.406 38.462 0.00 0.00 39.87 3.86
3212 6378 8.382030 TGATATATAGGCATTTGAACTGTGTG 57.618 34.615 0.00 0.00 0.00 3.82
3239 6405 4.216042 CACTTTTGCATGTGGATCTGTACA 59.784 41.667 0.00 0.00 0.00 2.90
3280 6454 3.826157 CCACAGTTCTTAAGGAATGGCAA 59.174 43.478 15.35 0.00 36.24 4.52
3441 6616 4.388485 TGAGGGAAAAACGTTAGGTTACC 58.612 43.478 0.00 6.83 38.08 2.85
3490 6930 1.153353 CTTGCTTGCCATTTGCCAAG 58.847 50.000 0.00 0.00 40.16 3.61
3530 6973 8.195436 CGTATTTCATCTACTTCCCTACTTTCA 58.805 37.037 0.00 0.00 0.00 2.69
3532 6975 8.970859 ATTTCATCTACTTCCCTACTTTCATG 57.029 34.615 0.00 0.00 0.00 3.07
3542 6985 5.321927 TCCCTACTTTCATGTTTCTTTCCC 58.678 41.667 0.00 0.00 0.00 3.97
3684 7128 1.009389 CGTGAACCGTCTTCAGCCTC 61.009 60.000 0.00 0.00 0.00 4.70
3799 7243 2.152602 TTGCCTGTGATGCCCCATCA 62.153 55.000 3.91 3.91 46.84 3.07
3810 7254 3.634218 TGCCCCATCATTATTCCCATT 57.366 42.857 0.00 0.00 0.00 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.969950 CCATCGGGATAGTTGGGTTAGA 59.030 50.000 0.00 0.00 35.59 2.10
1 2 2.969950 TCCATCGGGATAGTTGGGTTAG 59.030 50.000 0.00 0.00 38.64 2.34
2 3 2.969950 CTCCATCGGGATAGTTGGGTTA 59.030 50.000 0.00 0.00 43.91 2.85
3 4 1.768870 CTCCATCGGGATAGTTGGGTT 59.231 52.381 0.00 0.00 43.91 4.11
4 5 1.062428 TCTCCATCGGGATAGTTGGGT 60.062 52.381 0.00 0.00 43.91 4.51
5 6 1.620819 CTCTCCATCGGGATAGTTGGG 59.379 57.143 0.00 0.00 43.91 4.12
6 7 1.620819 CCTCTCCATCGGGATAGTTGG 59.379 57.143 0.00 0.00 43.91 3.77
7 8 2.036475 CACCTCTCCATCGGGATAGTTG 59.964 54.545 0.00 0.00 43.91 3.16
8 9 2.320781 CACCTCTCCATCGGGATAGTT 58.679 52.381 0.00 0.00 43.91 2.24
9 10 2.002505 CACCTCTCCATCGGGATAGT 57.997 55.000 0.00 0.00 43.91 2.12
10 11 0.605589 GCACCTCTCCATCGGGATAG 59.394 60.000 0.00 0.00 43.91 2.08
11 12 0.188587 AGCACCTCTCCATCGGGATA 59.811 55.000 0.00 0.00 43.91 2.59
12 13 0.692419 AAGCACCTCTCCATCGGGAT 60.692 55.000 0.00 0.00 43.91 3.85
13 14 0.032515 TAAGCACCTCTCCATCGGGA 60.033 55.000 0.00 0.00 42.29 5.14
14 15 1.051812 ATAAGCACCTCTCCATCGGG 58.948 55.000 0.00 0.00 0.00 5.14
15 16 2.874701 CAAATAAGCACCTCTCCATCGG 59.125 50.000 0.00 0.00 0.00 4.18
16 17 2.874701 CCAAATAAGCACCTCTCCATCG 59.125 50.000 0.00 0.00 0.00 3.84
17 18 3.217626 CCCAAATAAGCACCTCTCCATC 58.782 50.000 0.00 0.00 0.00 3.51
18 19 2.582636 ACCCAAATAAGCACCTCTCCAT 59.417 45.455 0.00 0.00 0.00 3.41
19 20 1.992557 ACCCAAATAAGCACCTCTCCA 59.007 47.619 0.00 0.00 0.00 3.86
20 21 2.808906 ACCCAAATAAGCACCTCTCC 57.191 50.000 0.00 0.00 0.00 3.71
21 22 5.099042 TCTAACCCAAATAAGCACCTCTC 57.901 43.478 0.00 0.00 0.00 3.20
22 23 4.536489 ACTCTAACCCAAATAAGCACCTCT 59.464 41.667 0.00 0.00 0.00 3.69
23 24 4.636206 CACTCTAACCCAAATAAGCACCTC 59.364 45.833 0.00 0.00 0.00 3.85
24 25 4.042934 ACACTCTAACCCAAATAAGCACCT 59.957 41.667 0.00 0.00 0.00 4.00
25 26 4.156008 CACACTCTAACCCAAATAAGCACC 59.844 45.833 0.00 0.00 0.00 5.01
26 27 4.760204 ACACACTCTAACCCAAATAAGCAC 59.240 41.667 0.00 0.00 0.00 4.40
27 28 4.980573 ACACACTCTAACCCAAATAAGCA 58.019 39.130 0.00 0.00 0.00 3.91
28 29 5.959618 AACACACTCTAACCCAAATAAGC 57.040 39.130 0.00 0.00 0.00 3.09
29 30 8.842358 TTCTAACACACTCTAACCCAAATAAG 57.158 34.615 0.00 0.00 0.00 1.73
30 31 9.629878 TTTTCTAACACACTCTAACCCAAATAA 57.370 29.630 0.00 0.00 0.00 1.40
31 32 9.802039 ATTTTCTAACACACTCTAACCCAAATA 57.198 29.630 0.00 0.00 0.00 1.40
32 33 8.706322 ATTTTCTAACACACTCTAACCCAAAT 57.294 30.769 0.00 0.00 0.00 2.32
33 34 9.629878 TTATTTTCTAACACACTCTAACCCAAA 57.370 29.630 0.00 0.00 0.00 3.28
34 35 9.059260 GTTATTTTCTAACACACTCTAACCCAA 57.941 33.333 0.00 0.00 0.00 4.12
35 36 8.434392 AGTTATTTTCTAACACACTCTAACCCA 58.566 33.333 0.00 0.00 0.00 4.51
36 37 8.843885 AGTTATTTTCTAACACACTCTAACCC 57.156 34.615 0.00 0.00 0.00 4.11
37 38 9.708092 AGAGTTATTTTCTAACACACTCTAACC 57.292 33.333 0.00 0.00 38.16 2.85
67 68 8.185506 TGTTTGGATACTCTAACACAGTTAGA 57.814 34.615 16.22 16.22 31.46 2.10
68 69 7.545965 CCTGTTTGGATACTCTAACACAGTTAG 59.454 40.741 9.97 9.97 38.35 2.34
69 70 7.383687 CCTGTTTGGATACTCTAACACAGTTA 58.616 38.462 0.00 0.00 38.35 2.24
70 71 6.231211 CCTGTTTGGATACTCTAACACAGTT 58.769 40.000 0.00 0.00 38.35 3.16
71 72 5.280011 CCCTGTTTGGATACTCTAACACAGT 60.280 44.000 0.00 0.00 38.35 3.55
72 73 5.178797 CCCTGTTTGGATACTCTAACACAG 58.821 45.833 0.00 0.00 38.35 3.66
73 74 4.564821 GCCCTGTTTGGATACTCTAACACA 60.565 45.833 0.00 0.00 38.35 3.72
74 75 3.939592 GCCCTGTTTGGATACTCTAACAC 59.060 47.826 0.00 0.00 38.35 3.32
75 76 3.054655 GGCCCTGTTTGGATACTCTAACA 60.055 47.826 0.00 0.00 38.35 2.41
76 77 3.054655 TGGCCCTGTTTGGATACTCTAAC 60.055 47.826 0.00 0.00 38.35 2.34
77 78 3.186283 TGGCCCTGTTTGGATACTCTAA 58.814 45.455 0.00 0.00 38.35 2.10
78 79 2.840511 TGGCCCTGTTTGGATACTCTA 58.159 47.619 0.00 0.00 38.35 2.43
79 80 1.668826 TGGCCCTGTTTGGATACTCT 58.331 50.000 0.00 0.00 38.35 3.24
80 81 2.689983 CAATGGCCCTGTTTGGATACTC 59.310 50.000 0.00 0.00 38.35 2.59
81 82 2.042979 ACAATGGCCCTGTTTGGATACT 59.957 45.455 0.00 0.00 38.35 2.12
82 83 2.456577 ACAATGGCCCTGTTTGGATAC 58.543 47.619 0.00 0.00 38.35 2.24
83 84 2.917713 ACAATGGCCCTGTTTGGATA 57.082 45.000 0.00 0.00 38.35 2.59
84 85 2.042979 ACTACAATGGCCCTGTTTGGAT 59.957 45.455 12.44 0.00 38.35 3.41
85 86 1.427368 ACTACAATGGCCCTGTTTGGA 59.573 47.619 12.44 1.75 38.35 3.53
86 87 1.923356 ACTACAATGGCCCTGTTTGG 58.077 50.000 12.44 6.80 0.00 3.28
87 88 2.890311 TCAACTACAATGGCCCTGTTTG 59.110 45.455 12.44 11.58 0.00 2.93
88 89 3.237268 TCAACTACAATGGCCCTGTTT 57.763 42.857 12.44 0.28 0.00 2.83
89 90 2.969821 TCAACTACAATGGCCCTGTT 57.030 45.000 12.44 0.00 0.00 3.16
90 91 4.584638 TTATCAACTACAATGGCCCTGT 57.415 40.909 11.93 11.93 0.00 4.00
91 92 4.520492 GGATTATCAACTACAATGGCCCTG 59.480 45.833 0.00 0.00 0.00 4.45
92 93 4.416848 AGGATTATCAACTACAATGGCCCT 59.583 41.667 0.00 0.00 0.00 5.19
93 94 4.729868 AGGATTATCAACTACAATGGCCC 58.270 43.478 0.00 0.00 0.00 5.80
94 95 4.762251 GGAGGATTATCAACTACAATGGCC 59.238 45.833 0.00 0.00 0.00 5.36
95 96 4.762251 GGGAGGATTATCAACTACAATGGC 59.238 45.833 0.00 0.00 0.00 4.40
96 97 5.316987 GGGGAGGATTATCAACTACAATGG 58.683 45.833 0.00 0.00 0.00 3.16
97 98 5.316987 GGGGGAGGATTATCAACTACAATG 58.683 45.833 0.00 0.00 0.00 2.82
98 99 5.584551 GGGGGAGGATTATCAACTACAAT 57.415 43.478 0.00 0.00 0.00 2.71
122 123 4.250305 GGTCACCACAGGGCACGT 62.250 66.667 0.00 0.00 37.90 4.49
123 124 2.107041 TAAGGTCACCACAGGGCACG 62.107 60.000 0.00 0.00 37.90 5.34
124 125 0.321653 CTAAGGTCACCACAGGGCAC 60.322 60.000 0.00 0.00 37.90 5.01
125 126 0.472925 TCTAAGGTCACCACAGGGCA 60.473 55.000 0.00 0.00 37.90 5.36
126 127 0.690762 TTCTAAGGTCACCACAGGGC 59.309 55.000 0.00 0.00 37.90 5.19
127 128 1.697432 TGTTCTAAGGTCACCACAGGG 59.303 52.381 0.00 0.00 41.29 4.45
128 129 3.181454 ACTTGTTCTAAGGTCACCACAGG 60.181 47.826 0.00 0.00 0.00 4.00
129 130 3.809832 CACTTGTTCTAAGGTCACCACAG 59.190 47.826 0.00 0.00 0.00 3.66
130 131 3.199071 ACACTTGTTCTAAGGTCACCACA 59.801 43.478 0.00 0.00 0.00 4.17
131 132 3.805207 ACACTTGTTCTAAGGTCACCAC 58.195 45.455 0.00 0.00 0.00 4.16
132 133 3.491964 CGACACTTGTTCTAAGGTCACCA 60.492 47.826 0.00 0.00 0.00 4.17
133 134 3.057734 CGACACTTGTTCTAAGGTCACC 58.942 50.000 0.00 0.00 0.00 4.02
134 135 2.475487 GCGACACTTGTTCTAAGGTCAC 59.525 50.000 0.00 0.00 0.00 3.67
135 136 2.547218 GGCGACACTTGTTCTAAGGTCA 60.547 50.000 0.00 0.00 0.00 4.02
136 137 2.067013 GGCGACACTTGTTCTAAGGTC 58.933 52.381 0.00 0.00 0.00 3.85
137 138 1.270678 GGGCGACACTTGTTCTAAGGT 60.271 52.381 0.00 0.00 0.00 3.50
138 139 1.270625 TGGGCGACACTTGTTCTAAGG 60.271 52.381 0.00 0.00 0.00 2.69
139 140 1.798813 GTGGGCGACACTTGTTCTAAG 59.201 52.381 0.00 0.00 46.72 2.18
140 141 1.873698 GTGGGCGACACTTGTTCTAA 58.126 50.000 0.00 0.00 46.72 2.10
141 142 3.599412 GTGGGCGACACTTGTTCTA 57.401 52.632 0.00 0.00 46.72 2.10
142 143 4.456806 GTGGGCGACACTTGTTCT 57.543 55.556 0.00 0.00 46.72 3.01
160 161 2.836360 TATGCCCTCGTCCCCGTC 60.836 66.667 0.00 0.00 35.01 4.79
161 162 2.838225 CTATGCCCTCGTCCCCGT 60.838 66.667 0.00 0.00 35.01 5.28
162 163 1.111116 TAACTATGCCCTCGTCCCCG 61.111 60.000 0.00 0.00 0.00 5.73
163 164 1.349067 ATAACTATGCCCTCGTCCCC 58.651 55.000 0.00 0.00 0.00 4.81
164 165 3.487120 AAATAACTATGCCCTCGTCCC 57.513 47.619 0.00 0.00 0.00 4.46
165 166 6.935208 AGAAATAAATAACTATGCCCTCGTCC 59.065 38.462 0.00 0.00 0.00 4.79
166 167 7.095187 CCAGAAATAAATAACTATGCCCTCGTC 60.095 40.741 0.00 0.00 0.00 4.20
167 168 6.710744 CCAGAAATAAATAACTATGCCCTCGT 59.289 38.462 0.00 0.00 0.00 4.18
168 169 6.710744 ACCAGAAATAAATAACTATGCCCTCG 59.289 38.462 0.00 0.00 0.00 4.63
169 170 7.522236 GCACCAGAAATAAATAACTATGCCCTC 60.522 40.741 0.00 0.00 0.00 4.30
170 171 6.265422 GCACCAGAAATAAATAACTATGCCCT 59.735 38.462 0.00 0.00 0.00 5.19
171 172 6.040391 TGCACCAGAAATAAATAACTATGCCC 59.960 38.462 0.00 0.00 0.00 5.36
172 173 7.038154 TGCACCAGAAATAAATAACTATGCC 57.962 36.000 0.00 0.00 0.00 4.40
173 174 7.535258 CGATGCACCAGAAATAAATAACTATGC 59.465 37.037 0.00 0.00 0.00 3.14
174 175 8.559536 ACGATGCACCAGAAATAAATAACTATG 58.440 33.333 0.00 0.00 0.00 2.23
175 176 8.677148 ACGATGCACCAGAAATAAATAACTAT 57.323 30.769 0.00 0.00 0.00 2.12
176 177 7.042992 CGACGATGCACCAGAAATAAATAACTA 60.043 37.037 0.00 0.00 0.00 2.24
177 178 6.238103 CGACGATGCACCAGAAATAAATAACT 60.238 38.462 0.00 0.00 0.00 2.24
178 179 5.901884 CGACGATGCACCAGAAATAAATAAC 59.098 40.000 0.00 0.00 0.00 1.89
179 180 5.007234 CCGACGATGCACCAGAAATAAATAA 59.993 40.000 0.00 0.00 0.00 1.40
180 181 4.509970 CCGACGATGCACCAGAAATAAATA 59.490 41.667 0.00 0.00 0.00 1.40
181 182 3.312421 CCGACGATGCACCAGAAATAAAT 59.688 43.478 0.00 0.00 0.00 1.40
182 183 2.675844 CCGACGATGCACCAGAAATAAA 59.324 45.455 0.00 0.00 0.00 1.40
183 184 2.276201 CCGACGATGCACCAGAAATAA 58.724 47.619 0.00 0.00 0.00 1.40
184 185 1.934589 CCGACGATGCACCAGAAATA 58.065 50.000 0.00 0.00 0.00 1.40
185 186 1.369091 GCCGACGATGCACCAGAAAT 61.369 55.000 0.00 0.00 0.00 2.17
186 187 2.032634 GCCGACGATGCACCAGAAA 61.033 57.895 0.00 0.00 0.00 2.52
187 188 2.434185 GCCGACGATGCACCAGAA 60.434 61.111 0.00 0.00 0.00 3.02
188 189 3.690280 TGCCGACGATGCACCAGA 61.690 61.111 0.00 0.00 32.85 3.86
194 195 4.865761 TAGCGGTGCCGACGATGC 62.866 66.667 15.45 0.00 42.83 3.91
195 196 2.954868 GTAGCGGTGCCGACGATG 60.955 66.667 15.45 0.00 42.83 3.84
196 197 4.203076 GGTAGCGGTGCCGACGAT 62.203 66.667 15.45 0.00 42.83 3.73
199 200 4.814294 CTGGGTAGCGGTGCCGAC 62.814 72.222 15.70 4.38 42.83 4.79
201 202 4.814294 GTCTGGGTAGCGGTGCCG 62.814 72.222 15.70 6.22 43.09 5.69
202 203 1.610554 TTAGTCTGGGTAGCGGTGCC 61.611 60.000 13.87 13.87 0.00 5.01
203 204 0.459759 GTTAGTCTGGGTAGCGGTGC 60.460 60.000 0.00 0.00 0.00 5.01
204 205 0.892755 TGTTAGTCTGGGTAGCGGTG 59.107 55.000 0.00 0.00 0.00 4.94
205 206 1.274447 GTTGTTAGTCTGGGTAGCGGT 59.726 52.381 0.00 0.00 0.00 5.68
206 207 1.274167 TGTTGTTAGTCTGGGTAGCGG 59.726 52.381 0.00 0.00 0.00 5.52
207 208 2.736144 TGTTGTTAGTCTGGGTAGCG 57.264 50.000 0.00 0.00 0.00 4.26
208 209 4.184629 CTCATGTTGTTAGTCTGGGTAGC 58.815 47.826 0.00 0.00 0.00 3.58
209 210 4.759782 CCTCATGTTGTTAGTCTGGGTAG 58.240 47.826 0.00 0.00 0.00 3.18
210 211 3.055385 GCCTCATGTTGTTAGTCTGGGTA 60.055 47.826 0.00 0.00 0.00 3.69
211 212 2.290323 GCCTCATGTTGTTAGTCTGGGT 60.290 50.000 0.00 0.00 0.00 4.51
212 213 2.359900 GCCTCATGTTGTTAGTCTGGG 58.640 52.381 0.00 0.00 0.00 4.45
213 214 2.290260 TGGCCTCATGTTGTTAGTCTGG 60.290 50.000 3.32 0.00 0.00 3.86
214 215 2.744202 GTGGCCTCATGTTGTTAGTCTG 59.256 50.000 3.32 0.00 0.00 3.51
215 216 2.639839 AGTGGCCTCATGTTGTTAGTCT 59.360 45.455 3.32 0.00 0.00 3.24
216 217 3.059352 AGTGGCCTCATGTTGTTAGTC 57.941 47.619 3.32 0.00 0.00 2.59
217 218 3.838317 TCTAGTGGCCTCATGTTGTTAGT 59.162 43.478 3.32 0.00 0.00 2.24
218 219 4.471904 TCTAGTGGCCTCATGTTGTTAG 57.528 45.455 3.32 0.00 0.00 2.34
219 220 4.901197 TTCTAGTGGCCTCATGTTGTTA 57.099 40.909 3.32 0.00 0.00 2.41
220 221 3.788227 TTCTAGTGGCCTCATGTTGTT 57.212 42.857 3.32 0.00 0.00 2.83
221 222 3.264193 TGATTCTAGTGGCCTCATGTTGT 59.736 43.478 3.32 0.00 0.00 3.32
222 223 3.877559 TGATTCTAGTGGCCTCATGTTG 58.122 45.455 3.32 0.00 0.00 3.33
223 224 4.164796 TGATGATTCTAGTGGCCTCATGTT 59.835 41.667 3.32 0.00 0.00 2.71
224 225 3.713248 TGATGATTCTAGTGGCCTCATGT 59.287 43.478 3.32 0.00 0.00 3.21
225 226 4.347360 TGATGATTCTAGTGGCCTCATG 57.653 45.455 3.32 0.00 0.00 3.07
226 227 5.378230 TTTGATGATTCTAGTGGCCTCAT 57.622 39.130 3.32 2.10 0.00 2.90
227 228 4.842531 TTTGATGATTCTAGTGGCCTCA 57.157 40.909 3.32 0.00 0.00 3.86
228 229 5.506982 GCAATTTGATGATTCTAGTGGCCTC 60.507 44.000 3.32 0.00 0.00 4.70
229 230 4.340381 GCAATTTGATGATTCTAGTGGCCT 59.660 41.667 3.32 0.00 0.00 5.19
230 231 4.340381 AGCAATTTGATGATTCTAGTGGCC 59.660 41.667 0.00 0.00 0.00 5.36
231 232 5.511234 AGCAATTTGATGATTCTAGTGGC 57.489 39.130 0.00 0.00 0.00 5.01
232 233 6.320672 AGGAAGCAATTTGATGATTCTAGTGG 59.679 38.462 0.00 0.00 43.43 4.00
233 234 7.330900 AGGAAGCAATTTGATGATTCTAGTG 57.669 36.000 0.00 0.00 43.43 2.74
234 235 6.545298 GGAGGAAGCAATTTGATGATTCTAGT 59.455 38.462 0.00 0.00 43.43 2.57
235 236 6.293298 CGGAGGAAGCAATTTGATGATTCTAG 60.293 42.308 0.00 0.00 43.43 2.43
236 237 5.528690 CGGAGGAAGCAATTTGATGATTCTA 59.471 40.000 0.00 0.00 43.43 2.10
237 238 4.337555 CGGAGGAAGCAATTTGATGATTCT 59.662 41.667 0.00 0.00 43.43 2.40
238 239 4.096984 ACGGAGGAAGCAATTTGATGATTC 59.903 41.667 0.00 0.00 43.24 2.52
239 240 4.019174 ACGGAGGAAGCAATTTGATGATT 58.981 39.130 0.00 0.00 0.00 2.57
240 241 3.624777 ACGGAGGAAGCAATTTGATGAT 58.375 40.909 0.00 0.00 0.00 2.45
241 242 3.009723 GACGGAGGAAGCAATTTGATGA 58.990 45.455 0.00 0.00 0.00 2.92
242 243 3.012518 AGACGGAGGAAGCAATTTGATG 58.987 45.455 0.00 0.00 0.00 3.07
243 244 3.274288 GAGACGGAGGAAGCAATTTGAT 58.726 45.455 0.00 0.00 0.00 2.57
244 245 2.699954 GAGACGGAGGAAGCAATTTGA 58.300 47.619 0.00 0.00 0.00 2.69
245 246 1.394917 CGAGACGGAGGAAGCAATTTG 59.605 52.381 0.00 0.00 0.00 2.32
246 247 1.726853 CGAGACGGAGGAAGCAATTT 58.273 50.000 0.00 0.00 0.00 1.82
247 248 3.442996 CGAGACGGAGGAAGCAATT 57.557 52.632 0.00 0.00 0.00 2.32
259 260 2.606272 GGGCACTTAATAAACCGAGACG 59.394 50.000 0.00 0.00 0.00 4.18
260 261 3.869832 GAGGGCACTTAATAAACCGAGAC 59.130 47.826 0.00 0.00 0.00 3.36
261 262 3.516300 TGAGGGCACTTAATAAACCGAGA 59.484 43.478 0.00 0.00 0.00 4.04
262 263 3.621715 GTGAGGGCACTTAATAAACCGAG 59.378 47.826 0.00 0.00 41.84 4.63
263 264 3.008157 TGTGAGGGCACTTAATAAACCGA 59.992 43.478 0.00 0.00 45.36 4.69
264 265 3.340034 TGTGAGGGCACTTAATAAACCG 58.660 45.455 0.00 0.00 45.36 4.44
265 266 5.914898 AATGTGAGGGCACTTAATAAACC 57.085 39.130 0.00 0.00 45.36 3.27
266 267 7.375053 TGAAAATGTGAGGGCACTTAATAAAC 58.625 34.615 0.00 0.00 45.36 2.01
267 268 7.531857 TGAAAATGTGAGGGCACTTAATAAA 57.468 32.000 0.00 0.00 45.36 1.40
268 269 7.531857 TTGAAAATGTGAGGGCACTTAATAA 57.468 32.000 0.00 0.00 45.36 1.40
269 270 7.716799 ATTGAAAATGTGAGGGCACTTAATA 57.283 32.000 0.00 0.00 45.36 0.98
270 271 6.610075 ATTGAAAATGTGAGGGCACTTAAT 57.390 33.333 0.00 0.00 45.36 1.40
271 272 6.418057 AATTGAAAATGTGAGGGCACTTAA 57.582 33.333 0.00 0.00 45.36 1.85
272 273 7.531857 TTAATTGAAAATGTGAGGGCACTTA 57.468 32.000 0.00 0.00 45.36 2.24
273 274 4.961438 AATTGAAAATGTGAGGGCACTT 57.039 36.364 0.00 0.00 45.36 3.16
274 275 6.041979 ACTTTAATTGAAAATGTGAGGGCACT 59.958 34.615 0.00 0.00 45.36 4.40
275 276 6.223120 ACTTTAATTGAAAATGTGAGGGCAC 58.777 36.000 0.00 0.00 45.35 5.01
276 277 6.418057 ACTTTAATTGAAAATGTGAGGGCA 57.582 33.333 0.00 0.00 0.00 5.36
277 278 6.368791 GGAACTTTAATTGAAAATGTGAGGGC 59.631 38.462 0.00 0.00 0.00 5.19
278 279 7.384932 GTGGAACTTTAATTGAAAATGTGAGGG 59.615 37.037 0.00 0.00 0.00 4.30
279 280 7.384932 GGTGGAACTTTAATTGAAAATGTGAGG 59.615 37.037 0.00 0.00 36.74 3.86
280 281 7.114811 CGGTGGAACTTTAATTGAAAATGTGAG 59.885 37.037 0.00 0.00 36.74 3.51
281 282 6.920758 CGGTGGAACTTTAATTGAAAATGTGA 59.079 34.615 0.00 0.00 36.74 3.58
282 283 6.699642 ACGGTGGAACTTTAATTGAAAATGTG 59.300 34.615 0.00 0.00 36.74 3.21
283 284 6.811954 ACGGTGGAACTTTAATTGAAAATGT 58.188 32.000 0.00 0.00 36.74 2.71
284 285 7.358023 CGAACGGTGGAACTTTAATTGAAAATG 60.358 37.037 0.00 0.00 36.74 2.32
285 286 6.639279 CGAACGGTGGAACTTTAATTGAAAAT 59.361 34.615 0.00 0.00 36.74 1.82
286 287 5.972382 CGAACGGTGGAACTTTAATTGAAAA 59.028 36.000 0.00 0.00 36.74 2.29
287 288 5.066246 ACGAACGGTGGAACTTTAATTGAAA 59.934 36.000 0.00 0.00 36.74 2.69
288 289 4.575645 ACGAACGGTGGAACTTTAATTGAA 59.424 37.500 0.00 0.00 36.74 2.69
289 290 4.128643 ACGAACGGTGGAACTTTAATTGA 58.871 39.130 0.00 0.00 36.74 2.57
290 291 4.477302 ACGAACGGTGGAACTTTAATTG 57.523 40.909 0.00 0.00 36.74 2.32
291 292 5.503662 AAACGAACGGTGGAACTTTAATT 57.496 34.783 0.00 0.00 36.74 1.40
292 293 6.348704 CCATAAACGAACGGTGGAACTTTAAT 60.349 38.462 0.00 0.00 36.74 1.40
293 294 5.049543 CCATAAACGAACGGTGGAACTTTAA 60.050 40.000 0.00 0.00 36.74 1.52
294 295 4.451774 CCATAAACGAACGGTGGAACTTTA 59.548 41.667 0.00 0.00 36.74 1.85
295 296 3.251487 CCATAAACGAACGGTGGAACTTT 59.749 43.478 0.00 0.00 36.74 2.66
296 297 2.809696 CCATAAACGAACGGTGGAACTT 59.190 45.455 0.00 0.00 36.74 2.66
297 298 2.037511 TCCATAAACGAACGGTGGAACT 59.962 45.455 0.00 0.00 36.12 3.01
298 299 2.415776 TCCATAAACGAACGGTGGAAC 58.584 47.619 0.00 0.00 36.12 3.62
299 300 2.835580 TCCATAAACGAACGGTGGAA 57.164 45.000 0.00 0.00 36.12 3.53
300 301 2.835580 TTCCATAAACGAACGGTGGA 57.164 45.000 0.00 4.40 37.20 4.02
301 302 5.548706 TTTATTCCATAAACGAACGGTGG 57.451 39.130 0.00 2.24 30.25 4.61
329 330 9.581289 CATACCATTTTTCCTACATATAACCCA 57.419 33.333 0.00 0.00 0.00 4.51
330 331 9.020731 CCATACCATTTTTCCTACATATAACCC 57.979 37.037 0.00 0.00 0.00 4.11
331 332 9.582648 ACCATACCATTTTTCCTACATATAACC 57.417 33.333 0.00 0.00 0.00 2.85
334 335 9.496873 CGAACCATACCATTTTTCCTACATATA 57.503 33.333 0.00 0.00 0.00 0.86
335 336 8.215050 TCGAACCATACCATTTTTCCTACATAT 58.785 33.333 0.00 0.00 0.00 1.78
336 337 7.496591 GTCGAACCATACCATTTTTCCTACATA 59.503 37.037 0.00 0.00 0.00 2.29
337 338 6.317893 GTCGAACCATACCATTTTTCCTACAT 59.682 38.462 0.00 0.00 0.00 2.29
338 339 5.644636 GTCGAACCATACCATTTTTCCTACA 59.355 40.000 0.00 0.00 0.00 2.74
339 340 5.878669 AGTCGAACCATACCATTTTTCCTAC 59.121 40.000 0.00 0.00 0.00 3.18
340 341 6.057321 AGTCGAACCATACCATTTTTCCTA 57.943 37.500 0.00 0.00 0.00 2.94
341 342 4.918588 AGTCGAACCATACCATTTTTCCT 58.081 39.130 0.00 0.00 0.00 3.36
342 343 5.644636 TGTAGTCGAACCATACCATTTTTCC 59.355 40.000 0.00 0.00 0.00 3.13
343 344 6.730960 TGTAGTCGAACCATACCATTTTTC 57.269 37.500 0.00 0.00 0.00 2.29
344 345 7.013464 TGTTTGTAGTCGAACCATACCATTTTT 59.987 33.333 0.00 0.00 37.20 1.94
345 346 6.487331 TGTTTGTAGTCGAACCATACCATTTT 59.513 34.615 0.00 0.00 37.20 1.82
346 347 5.998981 TGTTTGTAGTCGAACCATACCATTT 59.001 36.000 0.00 0.00 37.20 2.32
347 348 5.553123 TGTTTGTAGTCGAACCATACCATT 58.447 37.500 0.00 0.00 37.20 3.16
348 349 5.155278 TGTTTGTAGTCGAACCATACCAT 57.845 39.130 0.00 0.00 37.20 3.55
349 350 4.603989 TGTTTGTAGTCGAACCATACCA 57.396 40.909 0.00 0.00 37.20 3.25
350 351 5.613142 CGTTTGTTTGTAGTCGAACCATACC 60.613 44.000 0.00 0.00 37.20 2.73
351 352 5.368374 CGTTTGTTTGTAGTCGAACCATAC 58.632 41.667 0.00 0.00 37.20 2.39
352 353 4.084433 GCGTTTGTTTGTAGTCGAACCATA 60.084 41.667 0.00 0.00 37.20 2.74
353 354 3.303526 GCGTTTGTTTGTAGTCGAACCAT 60.304 43.478 0.00 0.00 37.20 3.55
354 355 2.030701 GCGTTTGTTTGTAGTCGAACCA 59.969 45.455 0.00 0.00 37.20 3.67
355 356 2.030701 TGCGTTTGTTTGTAGTCGAACC 59.969 45.455 0.00 0.00 37.20 3.62
356 357 3.307339 TGCGTTTGTTTGTAGTCGAAC 57.693 42.857 0.00 0.00 38.17 3.95
357 358 4.539509 ATTGCGTTTGTTTGTAGTCGAA 57.460 36.364 0.00 0.00 0.00 3.71
358 359 5.654317 TTATTGCGTTTGTTTGTAGTCGA 57.346 34.783 0.00 0.00 0.00 4.20
359 360 9.858247 ATATATTATTGCGTTTGTTTGTAGTCG 57.142 29.630 0.00 0.00 0.00 4.18
406 407 8.413229 GCCTCCTTGTATCTAATTTGCAAAATA 58.587 33.333 17.19 11.45 0.00 1.40
407 408 7.267857 GCCTCCTTGTATCTAATTTGCAAAAT 58.732 34.615 17.19 10.81 0.00 1.82
408 409 6.350949 GGCCTCCTTGTATCTAATTTGCAAAA 60.351 38.462 17.19 0.00 0.00 2.44
409 410 5.127031 GGCCTCCTTGTATCTAATTTGCAAA 59.873 40.000 15.44 15.44 0.00 3.68
410 411 4.644685 GGCCTCCTTGTATCTAATTTGCAA 59.355 41.667 0.00 0.00 0.00 4.08
411 412 4.207165 GGCCTCCTTGTATCTAATTTGCA 58.793 43.478 0.00 0.00 0.00 4.08
412 413 4.207165 TGGCCTCCTTGTATCTAATTTGC 58.793 43.478 3.32 0.00 0.00 3.68
413 414 5.278660 GCATGGCCTCCTTGTATCTAATTTG 60.279 44.000 3.32 0.00 32.20 2.32
414 415 4.829492 GCATGGCCTCCTTGTATCTAATTT 59.171 41.667 3.32 0.00 32.20 1.82
415 416 4.105377 AGCATGGCCTCCTTGTATCTAATT 59.895 41.667 3.32 0.00 32.20 1.40
416 417 3.654806 AGCATGGCCTCCTTGTATCTAAT 59.345 43.478 3.32 0.00 32.20 1.73
417 418 3.048600 AGCATGGCCTCCTTGTATCTAA 58.951 45.455 3.32 0.00 32.20 2.10
418 419 2.634940 GAGCATGGCCTCCTTGTATCTA 59.365 50.000 3.32 0.00 32.20 1.98
419 420 1.419387 GAGCATGGCCTCCTTGTATCT 59.581 52.381 3.32 0.00 32.20 1.98
420 421 1.544314 GGAGCATGGCCTCCTTGTATC 60.544 57.143 3.32 0.20 46.39 2.24
421 422 0.475906 GGAGCATGGCCTCCTTGTAT 59.524 55.000 3.32 0.00 46.39 2.29
422 423 1.915228 GGAGCATGGCCTCCTTGTA 59.085 57.895 3.32 0.00 46.39 2.41
423 424 2.679716 GGAGCATGGCCTCCTTGT 59.320 61.111 3.32 0.00 46.39 3.16
428 429 1.003003 GATTCTAGGGAGCATGGCCTC 59.997 57.143 3.32 0.00 0.00 4.70
429 430 1.063183 GATTCTAGGGAGCATGGCCT 58.937 55.000 3.32 0.00 0.00 5.19
430 431 0.037447 GGATTCTAGGGAGCATGGCC 59.963 60.000 0.00 0.00 0.00 5.36
431 432 0.037447 GGGATTCTAGGGAGCATGGC 59.963 60.000 0.00 0.00 0.00 4.40
432 433 1.627834 GAGGGATTCTAGGGAGCATGG 59.372 57.143 0.00 0.00 0.00 3.66
433 434 1.627834 GGAGGGATTCTAGGGAGCATG 59.372 57.143 0.00 0.00 0.00 4.06
434 435 1.511747 AGGAGGGATTCTAGGGAGCAT 59.488 52.381 0.00 0.00 0.00 3.79
435 436 0.944999 AGGAGGGATTCTAGGGAGCA 59.055 55.000 0.00 0.00 0.00 4.26
436 437 1.696884 CAAGGAGGGATTCTAGGGAGC 59.303 57.143 0.00 0.00 0.00 4.70
437 438 1.696884 GCAAGGAGGGATTCTAGGGAG 59.303 57.143 0.00 0.00 0.00 4.30
438 439 1.807814 GCAAGGAGGGATTCTAGGGA 58.192 55.000 0.00 0.00 0.00 4.20
439 440 0.394565 CGCAAGGAGGGATTCTAGGG 59.605 60.000 0.00 0.00 0.00 3.53
440 441 3.997672 CGCAAGGAGGGATTCTAGG 57.002 57.895 0.00 0.00 0.00 3.02
459 460 1.076727 AGTTTGGGGGCCTACTTGC 59.923 57.895 0.84 0.00 0.00 4.01
460 461 1.250840 GCAGTTTGGGGGCCTACTTG 61.251 60.000 0.84 0.00 0.00 3.16
461 462 1.076727 GCAGTTTGGGGGCCTACTT 59.923 57.895 0.84 0.00 0.00 2.24
462 463 2.763902 GCAGTTTGGGGGCCTACT 59.236 61.111 0.84 0.00 0.00 2.57
463 464 2.750237 CGCAGTTTGGGGGCCTAC 60.750 66.667 0.84 0.00 0.00 3.18
464 465 4.733542 GCGCAGTTTGGGGGCCTA 62.734 66.667 0.30 0.00 38.16 3.93
468 469 4.994756 AAGGGCGCAGTTTGGGGG 62.995 66.667 10.83 0.00 0.00 5.40
469 470 3.373565 GAAGGGCGCAGTTTGGGG 61.374 66.667 10.83 0.00 0.00 4.96
470 471 3.737172 CGAAGGGCGCAGTTTGGG 61.737 66.667 10.83 0.00 0.00 4.12
483 484 4.641645 TGGTGCAGGGTGGCGAAG 62.642 66.667 0.00 0.00 36.28 3.79
484 485 4.641645 CTGGTGCAGGGTGGCGAA 62.642 66.667 0.00 0.00 36.28 4.70
495 496 2.757980 TAAACCCCTTCGCCTGGTGC 62.758 60.000 1.39 0.00 31.32 5.01
496 497 0.250989 TTAAACCCCTTCGCCTGGTG 60.251 55.000 0.00 0.00 31.32 4.17
497 498 0.702316 ATTAAACCCCTTCGCCTGGT 59.298 50.000 0.00 0.00 0.00 4.00
498 499 1.847328 AATTAAACCCCTTCGCCTGG 58.153 50.000 0.00 0.00 0.00 4.45
499 500 3.953712 AAAATTAAACCCCTTCGCCTG 57.046 42.857 0.00 0.00 0.00 4.85
500 501 3.007506 CCAAAAATTAAACCCCTTCGCCT 59.992 43.478 0.00 0.00 0.00 5.52
501 502 3.007074 TCCAAAAATTAAACCCCTTCGCC 59.993 43.478 0.00 0.00 0.00 5.54
502 503 4.021807 TCTCCAAAAATTAAACCCCTTCGC 60.022 41.667 0.00 0.00 0.00 4.70
503 504 5.709966 CTCTCCAAAAATTAAACCCCTTCG 58.290 41.667 0.00 0.00 0.00 3.79
504 505 5.479306 GCTCTCCAAAAATTAAACCCCTTC 58.521 41.667 0.00 0.00 0.00 3.46
505 506 4.021456 CGCTCTCCAAAAATTAAACCCCTT 60.021 41.667 0.00 0.00 0.00 3.95
506 507 3.509967 CGCTCTCCAAAAATTAAACCCCT 59.490 43.478 0.00 0.00 0.00 4.79
507 508 3.845178 CGCTCTCCAAAAATTAAACCCC 58.155 45.455 0.00 0.00 0.00 4.95
508 509 3.250744 GCGCTCTCCAAAAATTAAACCC 58.749 45.455 0.00 0.00 0.00 4.11
509 510 3.056821 AGGCGCTCTCCAAAAATTAAACC 60.057 43.478 7.64 0.00 0.00 3.27
510 511 4.166523 GAGGCGCTCTCCAAAAATTAAAC 58.833 43.478 7.64 0.00 36.52 2.01
511 512 3.119990 CGAGGCGCTCTCCAAAAATTAAA 60.120 43.478 7.64 0.00 39.30 1.52
512 513 2.418628 CGAGGCGCTCTCCAAAAATTAA 59.581 45.455 7.64 0.00 39.30 1.40
513 514 2.006888 CGAGGCGCTCTCCAAAAATTA 58.993 47.619 7.64 0.00 39.30 1.40
514 515 0.804989 CGAGGCGCTCTCCAAAAATT 59.195 50.000 7.64 0.00 39.30 1.82
515 516 0.036388 TCGAGGCGCTCTCCAAAAAT 60.036 50.000 7.64 0.00 39.30 1.82
516 517 0.949105 GTCGAGGCGCTCTCCAAAAA 60.949 55.000 7.64 0.00 39.30 1.94
517 518 1.374252 GTCGAGGCGCTCTCCAAAA 60.374 57.895 7.64 0.00 39.30 2.44
518 519 2.261671 GTCGAGGCGCTCTCCAAA 59.738 61.111 7.64 0.00 39.30 3.28
519 520 4.116328 CGTCGAGGCGCTCTCCAA 62.116 66.667 7.64 0.00 39.30 3.53
521 522 4.539881 GTCGTCGAGGCGCTCTCC 62.540 72.222 7.64 0.00 39.30 3.71
522 523 4.872485 CGTCGTCGAGGCGCTCTC 62.872 72.222 7.64 11.60 42.71 3.20
530 531 4.447069 AGCAGTCGCGTCGTCGAG 62.447 66.667 5.77 2.26 45.49 4.04
531 532 4.440987 GAGCAGTCGCGTCGTCGA 62.441 66.667 5.77 7.51 45.49 4.20
541 542 2.507324 GAACCGAGGCGAGCAGTC 60.507 66.667 0.00 0.00 0.00 3.51
542 543 4.070552 GGAACCGAGGCGAGCAGT 62.071 66.667 0.00 0.00 0.00 4.40
543 544 4.069232 TGGAACCGAGGCGAGCAG 62.069 66.667 0.00 0.00 0.00 4.24
544 545 4.373116 GTGGAACCGAGGCGAGCA 62.373 66.667 0.00 0.00 0.00 4.26
546 547 3.277211 TTCGTGGAACCGAGGCGAG 62.277 63.158 0.00 0.00 38.23 5.03
547 548 3.296836 TTCGTGGAACCGAGGCGA 61.297 61.111 0.00 0.00 38.23 5.54
548 549 3.110178 GTTCGTGGAACCGAGGCG 61.110 66.667 0.00 0.00 38.23 5.52
549 550 1.737008 GAGTTCGTGGAACCGAGGC 60.737 63.158 4.96 0.00 42.85 4.70
550 551 1.443872 CGAGTTCGTGGAACCGAGG 60.444 63.158 4.96 0.00 42.85 4.63
551 552 0.728466 GTCGAGTTCGTGGAACCGAG 60.728 60.000 16.58 5.99 42.85 4.63
552 553 1.168407 AGTCGAGTTCGTGGAACCGA 61.168 55.000 13.90 13.90 42.85 4.69
553 554 0.518636 TAGTCGAGTTCGTGGAACCG 59.481 55.000 0.00 8.44 42.85 4.44
554 555 1.538950 ACTAGTCGAGTTCGTGGAACC 59.461 52.381 0.00 0.00 42.85 3.62
555 556 2.985406 ACTAGTCGAGTTCGTGGAAC 57.015 50.000 0.00 0.32 42.25 3.62
564 565 4.442375 CAAGTCATGGAACTAGTCGAGT 57.558 45.455 0.00 0.00 41.56 4.18
577 578 6.036517 CGAAATCTTTAGGAGTCCAAGTCATG 59.963 42.308 12.86 0.00 0.00 3.07
578 579 6.109359 CGAAATCTTTAGGAGTCCAAGTCAT 58.891 40.000 12.86 0.00 0.00 3.06
579 580 5.479306 CGAAATCTTTAGGAGTCCAAGTCA 58.521 41.667 12.86 0.00 0.00 3.41
580 581 4.330347 GCGAAATCTTTAGGAGTCCAAGTC 59.670 45.833 12.86 0.73 0.00 3.01
581 582 4.254492 GCGAAATCTTTAGGAGTCCAAGT 58.746 43.478 12.86 0.00 0.00 3.16
582 583 3.623510 GGCGAAATCTTTAGGAGTCCAAG 59.376 47.826 12.86 7.44 0.00 3.61
583 584 3.606687 GGCGAAATCTTTAGGAGTCCAA 58.393 45.455 12.86 0.72 0.00 3.53
584 585 2.418197 CGGCGAAATCTTTAGGAGTCCA 60.418 50.000 12.86 0.00 0.00 4.02
585 586 2.159142 TCGGCGAAATCTTTAGGAGTCC 60.159 50.000 7.35 0.00 0.00 3.85
586 587 2.858941 GTCGGCGAAATCTTTAGGAGTC 59.141 50.000 12.92 0.00 0.00 3.36
587 588 2.418334 GGTCGGCGAAATCTTTAGGAGT 60.418 50.000 12.92 0.00 0.00 3.85
588 589 2.159085 AGGTCGGCGAAATCTTTAGGAG 60.159 50.000 12.92 0.00 0.00 3.69
589 590 1.829222 AGGTCGGCGAAATCTTTAGGA 59.171 47.619 12.92 0.00 0.00 2.94
590 591 2.202566 GAGGTCGGCGAAATCTTTAGG 58.797 52.381 12.92 0.00 0.00 2.69
591 592 1.852895 CGAGGTCGGCGAAATCTTTAG 59.147 52.381 12.92 2.56 35.37 1.85
592 593 1.917273 CGAGGTCGGCGAAATCTTTA 58.083 50.000 12.92 0.00 35.37 1.85
593 594 1.359459 GCGAGGTCGGCGAAATCTTT 61.359 55.000 12.92 0.00 40.23 2.52
594 595 1.810030 GCGAGGTCGGCGAAATCTT 60.810 57.895 12.92 0.00 40.23 2.40
595 596 2.202756 GCGAGGTCGGCGAAATCT 60.203 61.111 12.92 9.94 40.23 2.40
605 606 4.736896 GTCACCCGTGGCGAGGTC 62.737 72.222 0.00 0.00 32.72 3.85
606 607 3.873679 TAGTCACCCGTGGCGAGGT 62.874 63.158 0.00 0.00 40.75 3.85
607 608 2.423898 ATAGTCACCCGTGGCGAGG 61.424 63.158 0.00 0.00 40.75 4.63
608 609 1.226974 CATAGTCACCCGTGGCGAG 60.227 63.158 0.00 0.00 40.75 5.03
609 610 2.889617 CATAGTCACCCGTGGCGA 59.110 61.111 0.00 0.00 40.75 5.54
610 611 2.890474 GCATAGTCACCCGTGGCG 60.890 66.667 0.00 0.00 40.75 5.69
611 612 1.815421 CAGCATAGTCACCCGTGGC 60.815 63.158 0.00 0.00 34.93 5.01
612 613 1.153369 CCAGCATAGTCACCCGTGG 60.153 63.158 0.00 0.00 0.00 4.94
613 614 1.815421 GCCAGCATAGTCACCCGTG 60.815 63.158 0.00 0.00 0.00 4.94
614 615 2.584608 GCCAGCATAGTCACCCGT 59.415 61.111 0.00 0.00 0.00 5.28
615 616 2.586079 CGCCAGCATAGTCACCCG 60.586 66.667 0.00 0.00 0.00 5.28
616 617 2.897350 GCGCCAGCATAGTCACCC 60.897 66.667 0.00 0.00 44.35 4.61
631 632 2.704973 AAAAACGGTTCTTCGCGGCG 62.705 55.000 17.70 17.70 0.00 6.46
632 633 1.009335 AAAAACGGTTCTTCGCGGC 60.009 52.632 6.13 0.00 0.00 6.53
647 648 8.586879 AGGATTCATTTTGGTTTTTGGAAAAA 57.413 26.923 0.00 0.00 35.67 1.94
648 649 9.859152 ATAGGATTCATTTTGGTTTTTGGAAAA 57.141 25.926 0.00 0.00 0.00 2.29
649 650 9.282569 CATAGGATTCATTTTGGTTTTTGGAAA 57.717 29.630 0.00 0.00 0.00 3.13
650 651 7.882271 CCATAGGATTCATTTTGGTTTTTGGAA 59.118 33.333 0.00 0.00 0.00 3.53
651 652 7.393216 CCATAGGATTCATTTTGGTTTTTGGA 58.607 34.615 0.00 0.00 0.00 3.53
652 653 6.598850 CCCATAGGATTCATTTTGGTTTTTGG 59.401 38.462 0.00 0.00 33.47 3.28
653 654 7.393216 TCCCATAGGATTCATTTTGGTTTTTG 58.607 34.615 0.00 0.00 37.19 2.44
654 655 7.237471 ACTCCCATAGGATTCATTTTGGTTTTT 59.763 33.333 0.00 0.00 42.93 1.94
655 656 6.730507 ACTCCCATAGGATTCATTTTGGTTTT 59.269 34.615 0.00 0.00 42.93 2.43
656 657 6.155049 CACTCCCATAGGATTCATTTTGGTTT 59.845 38.462 0.00 0.00 42.93 3.27
657 658 5.658190 CACTCCCATAGGATTCATTTTGGTT 59.342 40.000 0.00 0.00 42.93 3.67
658 659 5.203528 CACTCCCATAGGATTCATTTTGGT 58.796 41.667 0.00 0.00 42.93 3.67
659 660 4.038402 GCACTCCCATAGGATTCATTTTGG 59.962 45.833 0.00 0.00 42.93 3.28
660 661 4.646040 TGCACTCCCATAGGATTCATTTTG 59.354 41.667 0.00 0.00 42.93 2.44
661 662 4.646492 GTGCACTCCCATAGGATTCATTTT 59.354 41.667 10.32 0.00 42.93 1.82
662 663 4.210331 GTGCACTCCCATAGGATTCATTT 58.790 43.478 10.32 0.00 42.93 2.32
663 664 3.745480 CGTGCACTCCCATAGGATTCATT 60.745 47.826 16.19 0.00 42.93 2.57
664 665 2.224378 CGTGCACTCCCATAGGATTCAT 60.224 50.000 16.19 0.00 42.93 2.57
665 666 1.138859 CGTGCACTCCCATAGGATTCA 59.861 52.381 16.19 0.00 42.93 2.57
666 667 1.412710 TCGTGCACTCCCATAGGATTC 59.587 52.381 16.19 0.00 42.93 2.52
667 668 1.139058 GTCGTGCACTCCCATAGGATT 59.861 52.381 16.19 0.00 42.93 3.01
668 669 0.753262 GTCGTGCACTCCCATAGGAT 59.247 55.000 16.19 0.00 42.93 3.24
669 670 1.327690 GGTCGTGCACTCCCATAGGA 61.328 60.000 16.19 0.00 41.08 2.94
670 671 1.144057 GGTCGTGCACTCCCATAGG 59.856 63.158 16.19 0.00 0.00 2.57
671 672 1.144057 GGGTCGTGCACTCCCATAG 59.856 63.158 29.71 10.00 40.79 2.23
672 673 2.363975 GGGGTCGTGCACTCCCATA 61.364 63.158 32.83 6.95 40.39 2.74
673 674 3.717294 GGGGTCGTGCACTCCCAT 61.717 66.667 32.83 0.00 40.39 4.00
684 685 0.384669 GATTCTACTCACGGGGGTCG 59.615 60.000 0.00 0.00 45.88 4.79
685 686 0.751452 GGATTCTACTCACGGGGGTC 59.249 60.000 0.00 0.00 0.00 4.46
686 687 0.690077 GGGATTCTACTCACGGGGGT 60.690 60.000 0.00 0.00 0.00 4.95
687 688 0.398664 AGGGATTCTACTCACGGGGG 60.399 60.000 0.00 0.00 0.00 5.40
688 689 1.041437 GAGGGATTCTACTCACGGGG 58.959 60.000 0.00 0.00 33.95 5.73
689 690 1.041437 GGAGGGATTCTACTCACGGG 58.959 60.000 9.85 0.00 35.45 5.28
690 691 1.041437 GGGAGGGATTCTACTCACGG 58.959 60.000 9.85 0.00 35.45 4.94
691 692 1.957877 GAGGGAGGGATTCTACTCACG 59.042 57.143 9.85 0.00 41.93 4.35
692 693 2.962421 CTGAGGGAGGGATTCTACTCAC 59.038 54.545 9.85 7.01 35.98 3.51
693 694 2.859404 TCTGAGGGAGGGATTCTACTCA 59.141 50.000 9.85 0.00 37.40 3.41
734 735 1.936547 GAGAGCCGCGAGATTCAAATT 59.063 47.619 8.23 0.00 0.00 1.82
735 736 1.576356 GAGAGCCGCGAGATTCAAAT 58.424 50.000 8.23 0.00 0.00 2.32
786 787 3.142867 GACGTGATCGGTGCATGCG 62.143 63.158 14.09 0.00 41.85 4.73
829 830 1.635663 CCGCAAACATCTGGACCGTC 61.636 60.000 0.00 0.00 0.00 4.79
860 861 2.062777 GTAAGGAGGACCCCGGACC 61.063 68.421 0.73 3.21 36.73 4.46
861 862 1.001376 AGTAAGGAGGACCCCGGAC 59.999 63.158 0.73 0.00 36.73 4.79
862 863 1.001248 CAGTAAGGAGGACCCCGGA 59.999 63.158 0.73 0.00 36.73 5.14
863 864 2.732619 GCAGTAAGGAGGACCCCGG 61.733 68.421 0.00 0.00 36.73 5.73
864 865 2.732619 GGCAGTAAGGAGGACCCCG 61.733 68.421 0.00 0.00 36.73 5.73
865 866 2.376165 GGGCAGTAAGGAGGACCCC 61.376 68.421 0.00 0.00 36.73 4.95
866 867 0.988678 ATGGGCAGTAAGGAGGACCC 60.989 60.000 0.00 0.00 37.88 4.46
956 961 1.453745 CTCCCTCTCTCTCTGCGCT 60.454 63.158 9.73 0.00 0.00 5.92
957 962 1.034838 TTCTCCCTCTCTCTCTGCGC 61.035 60.000 0.00 0.00 0.00 6.09
958 963 1.468985 TTTCTCCCTCTCTCTCTGCG 58.531 55.000 0.00 0.00 0.00 5.18
959 964 2.365293 GGATTTCTCCCTCTCTCTCTGC 59.635 54.545 0.00 0.00 35.28 4.26
960 965 2.622942 CGGATTTCTCCCTCTCTCTCTG 59.377 54.545 0.00 0.00 38.45 3.35
961 966 2.424234 CCGGATTTCTCCCTCTCTCTCT 60.424 54.545 0.00 0.00 38.45 3.10
965 977 1.571457 TCTCCGGATTTCTCCCTCTCT 59.429 52.381 3.57 0.00 38.45 3.10
971 983 1.598882 GGCAATCTCCGGATTTCTCC 58.401 55.000 3.57 0.00 39.87 3.71
1174 1186 0.817654 ACCTGCAGACGAATCGATGA 59.182 50.000 17.39 0.00 0.00 2.92
1176 1188 0.248661 CGACCTGCAGACGAATCGAT 60.249 55.000 17.39 0.00 0.00 3.59
1201 1221 6.831727 TCAATCAATCAAGCAAACAAACAG 57.168 33.333 0.00 0.00 0.00 3.16
1212 1232 2.287188 CCCGGCGATTCAATCAATCAAG 60.287 50.000 9.30 0.00 41.13 3.02
1214 1234 1.308047 CCCGGCGATTCAATCAATCA 58.692 50.000 9.30 0.00 41.13 2.57
1215 1235 1.308998 ACCCGGCGATTCAATCAATC 58.691 50.000 9.30 0.00 38.06 2.67
1216 1236 1.762708 AACCCGGCGATTCAATCAAT 58.237 45.000 9.30 0.00 0.00 2.57
1221 1241 2.036006 CGGAAACCCGGCGATTCAA 61.036 57.895 9.30 0.00 43.22 2.69
1263 1284 2.510238 CCTCGAGGCTTCCGCTTG 60.510 66.667 20.67 0.00 36.09 4.01
1335 1359 2.125106 CGGTAGTTGGGCTGCTCC 60.125 66.667 0.00 0.00 0.00 4.70
1373 1397 4.171186 CCCTTAGCTTGGGGAGGT 57.829 61.111 16.08 0.00 45.18 3.85
1381 1405 9.772973 AAAAATAAAAATCGAAACCCTTAGCTT 57.227 25.926 0.00 0.00 0.00 3.74
1440 1464 8.693120 AGATACATTCTTCGGTTAGTATCTGA 57.307 34.615 10.95 0.00 43.66 3.27
1441 1465 9.751542 AAAGATACATTCTTCGGTTAGTATCTG 57.248 33.333 12.11 0.00 44.09 2.90
1461 1485 9.462174 CACAAGCAAATACACAAAAGAAAGATA 57.538 29.630 0.00 0.00 0.00 1.98
1509 1533 2.225908 ACCCCCACCTGATACTCTTCTT 60.226 50.000 0.00 0.00 0.00 2.52
1544 1568 1.548719 TCGCTGGAAAGGAAGAATCGA 59.451 47.619 0.00 0.00 0.00 3.59
1556 1580 1.398041 CGAATCAAATGCTCGCTGGAA 59.602 47.619 0.00 0.00 0.00 3.53
1581 1605 9.614792 AGAACAAAGAAACAGAGTTAATGTACT 57.385 29.630 0.00 0.00 0.00 2.73
1587 1611 8.798402 TCCAAAAGAACAAAGAAACAGAGTTAA 58.202 29.630 0.00 0.00 0.00 2.01
1589 1613 7.227049 TCCAAAAGAACAAAGAAACAGAGTT 57.773 32.000 0.00 0.00 0.00 3.01
1591 1615 7.710896 AGATCCAAAAGAACAAAGAAACAGAG 58.289 34.615 0.00 0.00 0.00 3.35
1592 1616 7.557719 AGAGATCCAAAAGAACAAAGAAACAGA 59.442 33.333 0.00 0.00 0.00 3.41
1593 1617 7.646922 CAGAGATCCAAAAGAACAAAGAAACAG 59.353 37.037 0.00 0.00 0.00 3.16
1594 1618 7.122650 ACAGAGATCCAAAAGAACAAAGAAACA 59.877 33.333 0.00 0.00 0.00 2.83
1595 1619 7.484140 ACAGAGATCCAAAAGAACAAAGAAAC 58.516 34.615 0.00 0.00 0.00 2.78
1596 1620 7.645058 ACAGAGATCCAAAAGAACAAAGAAA 57.355 32.000 0.00 0.00 0.00 2.52
1597 1621 7.645058 AACAGAGATCCAAAAGAACAAAGAA 57.355 32.000 0.00 0.00 0.00 2.52
1598 1622 7.557719 AGAAACAGAGATCCAAAAGAACAAAGA 59.442 33.333 0.00 0.00 0.00 2.52
1599 1623 7.710896 AGAAACAGAGATCCAAAAGAACAAAG 58.289 34.615 0.00 0.00 0.00 2.77
1600 1624 7.645058 AGAAACAGAGATCCAAAAGAACAAA 57.355 32.000 0.00 0.00 0.00 2.83
1601 1625 7.416664 CCAAGAAACAGAGATCCAAAAGAACAA 60.417 37.037 0.00 0.00 0.00 2.83
1602 1626 6.039717 CCAAGAAACAGAGATCCAAAAGAACA 59.960 38.462 0.00 0.00 0.00 3.18
1603 1627 6.039829 ACCAAGAAACAGAGATCCAAAAGAAC 59.960 38.462 0.00 0.00 0.00 3.01
1604 1628 6.129179 ACCAAGAAACAGAGATCCAAAAGAA 58.871 36.000 0.00 0.00 0.00 2.52
1605 1629 5.694995 ACCAAGAAACAGAGATCCAAAAGA 58.305 37.500 0.00 0.00 0.00 2.52
1606 1630 6.183360 ACAACCAAGAAACAGAGATCCAAAAG 60.183 38.462 0.00 0.00 0.00 2.27
1607 1631 5.656416 ACAACCAAGAAACAGAGATCCAAAA 59.344 36.000 0.00 0.00 0.00 2.44
1608 1632 5.200483 ACAACCAAGAAACAGAGATCCAAA 58.800 37.500 0.00 0.00 0.00 3.28
1609 1633 4.792068 ACAACCAAGAAACAGAGATCCAA 58.208 39.130 0.00 0.00 0.00 3.53
1610 1634 4.437682 ACAACCAAGAAACAGAGATCCA 57.562 40.909 0.00 0.00 0.00 3.41
1611 1635 5.774498 AAACAACCAAGAAACAGAGATCC 57.226 39.130 0.00 0.00 0.00 3.36
1612 1636 5.979517 CCAAAACAACCAAGAAACAGAGATC 59.020 40.000 0.00 0.00 0.00 2.75
1613 1637 5.656416 TCCAAAACAACCAAGAAACAGAGAT 59.344 36.000 0.00 0.00 0.00 2.75
1614 1638 5.013547 TCCAAAACAACCAAGAAACAGAGA 58.986 37.500 0.00 0.00 0.00 3.10
1635 1659 2.110006 GCTTCCCCTGCTCGATCC 59.890 66.667 0.00 0.00 0.00 3.36
1649 1673 2.974698 GTGCTGTGCGTCCTGCTT 60.975 61.111 6.82 0.00 46.63 3.91
1729 1756 4.711949 CCTGCAGCTGTTCGGCCT 62.712 66.667 16.64 0.00 34.87 5.19
1761 1788 0.032615 TTGACAAAACTGGGGTGGCT 60.033 50.000 0.00 0.00 0.00 4.75
1899 1926 1.947456 GCGAGTAATCCATCCAAACCC 59.053 52.381 0.00 0.00 0.00 4.11
1990 3276 1.838073 AATCGGACTCGGCACCCTTT 61.838 55.000 0.00 0.00 36.95 3.11
2148 3434 4.021719 GGAATGCACCATATTGAGGGAATG 60.022 45.833 0.00 0.00 0.00 2.67
2149 3435 4.154942 GGAATGCACCATATTGAGGGAAT 58.845 43.478 0.00 0.00 0.00 3.01
2150 3436 3.565307 GGAATGCACCATATTGAGGGAA 58.435 45.455 0.00 0.00 0.00 3.97
2151 3437 2.158475 GGGAATGCACCATATTGAGGGA 60.158 50.000 0.00 0.00 0.00 4.20
2152 3438 2.158415 AGGGAATGCACCATATTGAGGG 60.158 50.000 0.00 0.00 0.00 4.30
2153 3439 3.234234 AGGGAATGCACCATATTGAGG 57.766 47.619 0.00 0.00 0.00 3.86
2154 3440 3.956199 ACAAGGGAATGCACCATATTGAG 59.044 43.478 9.11 0.00 0.00 3.02
2155 3441 3.953612 GACAAGGGAATGCACCATATTGA 59.046 43.478 9.11 0.00 0.00 2.57
2156 3442 3.956199 AGACAAGGGAATGCACCATATTG 59.044 43.478 0.00 0.00 0.00 1.90
2157 3443 3.956199 CAGACAAGGGAATGCACCATATT 59.044 43.478 0.00 0.00 0.00 1.28
2158 3444 3.559069 CAGACAAGGGAATGCACCATAT 58.441 45.455 0.00 0.00 0.00 1.78
2159 3445 2.357050 CCAGACAAGGGAATGCACCATA 60.357 50.000 0.00 0.00 0.00 2.74
2160 3446 1.617804 CCAGACAAGGGAATGCACCAT 60.618 52.381 0.00 0.00 0.00 3.55
2161 3447 0.251297 CCAGACAAGGGAATGCACCA 60.251 55.000 0.00 0.00 0.00 4.17
2162 3448 0.038166 TCCAGACAAGGGAATGCACC 59.962 55.000 0.00 0.00 0.00 5.01
2163 3449 1.541588 GTTCCAGACAAGGGAATGCAC 59.458 52.381 0.00 0.00 45.55 4.57
2203 3508 4.095932 CACATCCATTCTCATTGGACACAG 59.904 45.833 0.00 0.00 45.71 3.66
2245 3550 3.066380 GCCATTTGGAACGCAATTCTTT 58.934 40.909 0.00 0.00 37.48 2.52
2269 3574 8.067780 GAAGAAAGCTTCGAGATAATCCTAAC 57.932 38.462 0.00 0.00 40.96 2.34
2294 3606 1.769733 CATCAGCAAACCACCAAACG 58.230 50.000 0.00 0.00 0.00 3.60
2341 3653 7.492352 ACTCAATCAACTGTTTTAGGTGTAC 57.508 36.000 0.00 0.00 44.74 2.90
2342 3654 9.616156 TTAACTCAATCAACTGTTTTAGGTGTA 57.384 29.630 0.00 0.00 44.74 2.90
2343 3655 8.514330 TTAACTCAATCAACTGTTTTAGGTGT 57.486 30.769 0.00 0.00 44.74 4.16
2344 3656 9.965824 AATTAACTCAATCAACTGTTTTAGGTG 57.034 29.630 0.00 0.00 45.87 4.00
2352 3664 7.893302 TCCCCATAAATTAACTCAATCAACTGT 59.107 33.333 0.00 0.00 0.00 3.55
2371 3693 6.334378 TGACCATAACAAGATTTCCCCATA 57.666 37.500 0.00 0.00 0.00 2.74
2440 3762 3.296709 CTCCCTCCGTCCCACAACG 62.297 68.421 0.00 0.00 42.24 4.10
2446 3768 1.790818 AAATCTACTCCCTCCGTCCC 58.209 55.000 0.00 0.00 0.00 4.46
2448 3770 6.822170 ACAATTTTAAATCTACTCCCTCCGTC 59.178 38.462 0.00 0.00 0.00 4.79
2450 3772 7.335924 TCAACAATTTTAAATCTACTCCCTCCG 59.664 37.037 0.00 0.00 0.00 4.63
2451 3773 8.575649 TCAACAATTTTAAATCTACTCCCTCC 57.424 34.615 0.00 0.00 0.00 4.30
2452 3774 9.232473 ACTCAACAATTTTAAATCTACTCCCTC 57.768 33.333 0.00 0.00 0.00 4.30
2453 3775 9.014297 CACTCAACAATTTTAAATCTACTCCCT 57.986 33.333 0.00 0.00 0.00 4.20
2454 3776 8.244113 CCACTCAACAATTTTAAATCTACTCCC 58.756 37.037 0.00 0.00 0.00 4.30
2455 3777 9.010029 TCCACTCAACAATTTTAAATCTACTCC 57.990 33.333 0.00 0.00 0.00 3.85
2457 3779 8.515414 GCTCCACTCAACAATTTTAAATCTACT 58.485 33.333 0.00 0.00 0.00 2.57
2458 3780 7.755373 GGCTCCACTCAACAATTTTAAATCTAC 59.245 37.037 0.00 0.00 0.00 2.59
2459 3781 7.450014 TGGCTCCACTCAACAATTTTAAATCTA 59.550 33.333 0.00 0.00 0.00 1.98
2460 3782 6.267471 TGGCTCCACTCAACAATTTTAAATCT 59.733 34.615 0.00 0.00 0.00 2.40
2461 3783 6.366061 GTGGCTCCACTCAACAATTTTAAATC 59.634 38.462 11.61 0.00 43.12 2.17
2462 3784 6.183360 TGTGGCTCCACTCAACAATTTTAAAT 60.183 34.615 18.72 0.00 46.30 1.40
2463 3785 5.127845 TGTGGCTCCACTCAACAATTTTAAA 59.872 36.000 18.72 0.00 46.30 1.52
2464 3786 4.646945 TGTGGCTCCACTCAACAATTTTAA 59.353 37.500 18.72 0.00 46.30 1.52
2466 3788 3.030291 TGTGGCTCCACTCAACAATTTT 58.970 40.909 18.72 0.00 46.30 1.82
2470 3792 0.546122 ACTGTGGCTCCACTCAACAA 59.454 50.000 18.72 0.00 46.30 2.83
2494 3816 4.787598 CAACTTTCACATTCCTTCGGAAG 58.212 43.478 10.82 10.82 45.48 3.46
2497 3819 2.293122 TGCAACTTTCACATTCCTTCGG 59.707 45.455 0.00 0.00 0.00 4.30
2502 3824 5.754890 ACATTCTTTGCAACTTTCACATTCC 59.245 36.000 0.00 0.00 0.00 3.01
2591 3924 6.369890 GCTTAGAATGAAGGAATATCGCATCA 59.630 38.462 0.00 0.00 0.00 3.07
2592 3925 6.369890 TGCTTAGAATGAAGGAATATCGCATC 59.630 38.462 0.00 0.00 0.00 3.91
2593 3926 6.233434 TGCTTAGAATGAAGGAATATCGCAT 58.767 36.000 0.00 0.00 0.00 4.73
2623 3958 9.200817 AGGGAACATGTATTTGTAAGCATTATT 57.799 29.630 0.00 0.00 30.46 1.40
2625 3960 8.465999 CAAGGGAACATGTATTTGTAAGCATTA 58.534 33.333 0.00 0.00 0.00 1.90
2668 4016 9.685276 TCAGTGAATTGTTTCCTATTCATGTAT 57.315 29.630 0.00 0.00 42.17 2.29
2691 4040 4.065789 GTTCCCAGTTGTTAGTCCTTCAG 58.934 47.826 0.00 0.00 0.00 3.02
2755 4179 4.040755 AGAGGGTCCATTATTAGCAGTGT 58.959 43.478 0.00 0.00 0.00 3.55
2772 4196 5.219343 TGCATCATGTACATAAGAGAGGG 57.781 43.478 8.32 0.32 0.00 4.30
2778 4202 4.512944 GTGGACCTGCATCATGTACATAAG 59.487 45.833 8.32 2.63 26.71 1.73
2852 4276 8.709308 ACAATTTACCTGCTCTAAGTATCTCAT 58.291 33.333 0.00 0.00 0.00 2.90
3002 4440 5.354234 AGTTAAGTTGCGGTTGAATAGATGG 59.646 40.000 0.00 0.00 0.00 3.51
3006 4444 5.408604 ACAGAGTTAAGTTGCGGTTGAATAG 59.591 40.000 0.00 0.00 0.00 1.73
3009 4447 3.537580 ACAGAGTTAAGTTGCGGTTGAA 58.462 40.909 0.00 0.00 0.00 2.69
3012 4450 3.314357 GGAAACAGAGTTAAGTTGCGGTT 59.686 43.478 0.00 0.00 0.00 4.44
3016 4454 3.304726 GGCAGGAAACAGAGTTAAGTTGC 60.305 47.826 0.00 0.00 0.00 4.17
3038 4476 4.275689 TCACAAATCACAACTAACTGCAGG 59.724 41.667 19.93 2.38 0.00 4.85
3078 6031 6.788598 TTTGGCAGATATAGAAATTTGGCA 57.211 33.333 0.00 0.00 38.99 4.92
3102 6055 8.800370 TTAATGTCTGGCATGTAATCAACTAA 57.200 30.769 0.00 0.00 37.96 2.24
3143 6285 2.203422 CACCGCTCCCACCCAAAA 60.203 61.111 0.00 0.00 0.00 2.44
3144 6286 4.966787 GCACCGCTCCCACCCAAA 62.967 66.667 0.00 0.00 0.00 3.28
3239 6405 4.519610 AAAAACTGCCGCCCAGAT 57.480 50.000 8.11 0.00 44.64 2.90
3275 6449 1.144913 AGGTAAGCCAAGAGTTTGCCA 59.855 47.619 0.00 0.00 42.74 4.92
3280 6454 3.570125 GCTTTTGAGGTAAGCCAAGAGTT 59.430 43.478 0.00 0.00 41.62 3.01
3380 6554 7.985184 TCATGGTACCAATACTCAAATGTAGAC 59.015 37.037 20.76 0.00 0.00 2.59
3394 6569 7.446319 CAGATATGACACATTCATGGTACCAAT 59.554 37.037 20.76 5.05 45.22 3.16
3490 6930 2.467566 AATACGAGTGTTGGTGGTCC 57.532 50.000 0.00 0.00 0.00 4.46
3684 7128 5.766150 TTTAACATTGTCTGTCACCCAAG 57.234 39.130 0.00 0.00 36.98 3.61
3763 7207 5.518487 ACAGGCAAAATTTACAAGTTTCGTG 59.482 36.000 0.00 0.00 0.00 4.35
3799 7243 8.472413 CATCACAAGAAGTTGAATGGGAATAAT 58.528 33.333 0.00 0.00 37.10 1.28


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.