Multiple sequence alignment - TraesCS4A01G425100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G425100 chr4A 100.000 4480 0 0 1 4480 696005585 696010064 0.000000e+00 8274.0
1 TraesCS4A01G425100 chr4A 79.299 628 86 23 1190 1796 632369142 632369746 2.510000e-107 399.0
2 TraesCS4A01G425100 chr4A 88.693 283 30 2 3648 3928 660875976 660876258 1.190000e-90 344.0
3 TraesCS4A01G425100 chr4A 85.866 283 37 3 3648 3928 49336843 49336562 9.420000e-77 298.0
4 TraesCS4A01G425100 chr7D 88.345 2960 235 42 459 3390 31948047 31945170 0.000000e+00 3454.0
5 TraesCS4A01G425100 chr7D 87.965 1022 101 13 2219 3236 536650895 536649892 0.000000e+00 1186.0
6 TraesCS4A01G425100 chr7D 86.563 1027 95 14 2219 3233 10631059 10632054 0.000000e+00 1092.0
7 TraesCS4A01G425100 chr7D 91.289 551 31 9 3943 4480 31944624 31944078 0.000000e+00 736.0
8 TraesCS4A01G425100 chr7D 88.462 468 48 3 5 471 31948528 31948066 1.090000e-155 560.0
9 TraesCS4A01G425100 chr7D 87.703 431 32 8 1084 1505 109949814 109950232 2.420000e-132 483.0
10 TraesCS4A01G425100 chr2D 86.352 1502 164 26 1907 3390 604077657 604079135 0.000000e+00 1600.0
11 TraesCS4A01G425100 chr2D 86.988 830 57 13 1084 1902 477990845 477991634 0.000000e+00 887.0
12 TraesCS4A01G425100 chr2D 91.155 554 34 4 3936 4480 604129433 604129980 0.000000e+00 737.0
13 TraesCS4A01G425100 chr2D 83.630 281 42 4 3648 3925 87429772 87430051 1.240000e-65 261.0
14 TraesCS4A01G425100 chr2D 85.279 197 19 5 1084 1271 477991882 477991687 1.270000e-45 195.0
15 TraesCS4A01G425100 chr2D 84.746 177 19 5 1094 1264 73456199 73456025 2.140000e-38 171.0
16 TraesCS4A01G425100 chr5D 86.255 1506 142 28 1907 3390 404854326 404855788 0.000000e+00 1574.0
17 TraesCS4A01G425100 chr5D 91.225 547 37 4 3943 4480 404856322 404856866 0.000000e+00 734.0
18 TraesCS4A01G425100 chr5D 93.103 58 4 0 3567 3624 404856252 404856309 7.980000e-13 86.1
19 TraesCS4A01G425100 chr2A 82.846 1504 180 34 1907 3390 736006408 736007853 0.000000e+00 1277.0
20 TraesCS4A01G425100 chr2A 91.336 554 34 5 3936 4480 736008440 736008988 0.000000e+00 745.0
21 TraesCS4A01G425100 chr2A 86.942 291 31 7 3644 3928 39703176 39703465 2.010000e-83 320.0
22 TraesCS4A01G425100 chr2A 93.220 59 4 0 3564 3622 736008304 736008362 2.220000e-13 87.9
23 TraesCS4A01G425100 chr7A 87.568 1110 107 17 1805 2910 32012869 32011787 0.000000e+00 1256.0
24 TraesCS4A01G425100 chr7A 87.985 799 55 18 2864 3647 32011790 32011018 0.000000e+00 905.0
25 TraesCS4A01G425100 chr7A 88.256 562 51 5 3934 4480 32011026 32010465 0.000000e+00 658.0
26 TraesCS4A01G425100 chr7A 89.809 471 44 3 1 469 32025541 32025073 6.410000e-168 601.0
27 TraesCS4A01G425100 chr7A 87.475 495 30 16 470 959 32025038 32024571 3.940000e-150 542.0
28 TraesCS4A01G425100 chr7A 81.215 708 72 34 900 1571 32013910 32013228 8.590000e-142 514.0
29 TraesCS4A01G425100 chr6D 88.270 1023 102 9 2219 3236 425082208 425081199 0.000000e+00 1208.0
30 TraesCS4A01G425100 chr6D 87.050 1027 94 11 2219 3233 17969890 17968891 0.000000e+00 1123.0
31 TraesCS4A01G425100 chr6D 87.585 443 34 5 1084 1517 276587900 276588330 1.120000e-135 494.0
32 TraesCS4A01G425100 chr6D 86.316 190 17 4 1084 1264 415403231 415403042 9.830000e-47 198.0
33 TraesCS4A01G425100 chr5B 85.575 1026 112 9 2219 3233 118951758 118952758 0.000000e+00 1042.0
34 TraesCS4A01G425100 chr5B 86.712 888 85 12 2219 3100 577236829 577237689 0.000000e+00 955.0
35 TraesCS4A01G425100 chr5B 78.611 907 112 43 1248 2095 460195984 460195101 3.970000e-145 525.0
36 TraesCS4A01G425100 chr5B 89.825 285 26 3 3647 3928 63471148 63471432 3.290000e-96 363.0
37 TraesCS4A01G425100 chr5B 87.633 283 32 2 3642 3921 319320936 319321218 4.320000e-85 326.0
38 TraesCS4A01G425100 chr2B 86.907 886 87 9 2219 3100 359317981 359317121 0.000000e+00 966.0
39 TraesCS4A01G425100 chr6B 88.444 649 70 5 2586 3233 92353615 92354259 0.000000e+00 778.0
40 TraesCS4A01G425100 chr6B 84.709 327 31 14 1250 1565 180390933 180391251 4.350000e-80 309.0
41 TraesCS4A01G425100 chr7B 91.164 464 39 1 1917 2378 630109326 630108863 2.940000e-176 628.0
42 TraesCS4A01G425100 chr1B 78.084 908 115 47 1248 2095 637313533 637312650 8.650000e-137 497.0
43 TraesCS4A01G425100 chr1B 77.863 908 118 44 1248 2095 27091641 27092525 1.870000e-133 486.0
44 TraesCS4A01G425100 chr1B 82.042 284 47 4 3648 3928 49095022 49095304 5.790000e-59 239.0
45 TraesCS4A01G425100 chrUn 86.907 443 28 6 1462 1902 477296179 477296593 1.890000e-128 470.0
46 TraesCS4A01G425100 chrUn 81.416 113 12 3 468 580 356835241 356835344 2.870000e-12 84.2
47 TraesCS4A01G425100 chr4B 78.242 694 92 34 1248 1907 116356012 116355344 1.510000e-104 390.0
48 TraesCS4A01G425100 chr4B 86.111 288 35 5 3646 3928 672445586 672445873 5.630000e-79 305.0
49 TraesCS4A01G425100 chr4B 89.944 179 18 0 1917 2095 116355307 116355129 9.690000e-57 231.0
50 TraesCS4A01G425100 chr5A 78.846 624 92 25 1190 1796 707685241 707685841 7.030000e-103 385.0
51 TraesCS4A01G425100 chr6A 86.620 284 35 3 3648 3928 520510242 520509959 1.210000e-80 311.0
52 TraesCS4A01G425100 chr6A 79.487 156 23 6 468 622 48549532 48549385 7.930000e-18 102.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G425100 chr4A 696005585 696010064 4479 False 8274.000000 8274 100.000000 1 4480 1 chr4A.!!$F3 4479
1 TraesCS4A01G425100 chr4A 632369142 632369746 604 False 399.000000 399 79.299000 1190 1796 1 chr4A.!!$F1 606
2 TraesCS4A01G425100 chr7D 31944078 31948528 4450 True 1583.333333 3454 89.365333 5 4480 3 chr7D.!!$R2 4475
3 TraesCS4A01G425100 chr7D 536649892 536650895 1003 True 1186.000000 1186 87.965000 2219 3236 1 chr7D.!!$R1 1017
4 TraesCS4A01G425100 chr7D 10631059 10632054 995 False 1092.000000 1092 86.563000 2219 3233 1 chr7D.!!$F1 1014
5 TraesCS4A01G425100 chr2D 604077657 604079135 1478 False 1600.000000 1600 86.352000 1907 3390 1 chr2D.!!$F3 1483
6 TraesCS4A01G425100 chr2D 477990845 477991634 789 False 887.000000 887 86.988000 1084 1902 1 chr2D.!!$F2 818
7 TraesCS4A01G425100 chr2D 604129433 604129980 547 False 737.000000 737 91.155000 3936 4480 1 chr2D.!!$F4 544
8 TraesCS4A01G425100 chr5D 404854326 404856866 2540 False 798.033333 1574 90.194333 1907 4480 3 chr5D.!!$F1 2573
9 TraesCS4A01G425100 chr2A 736006408 736008988 2580 False 703.300000 1277 89.134000 1907 4480 3 chr2A.!!$F2 2573
10 TraesCS4A01G425100 chr7A 32010465 32013910 3445 True 833.250000 1256 86.256000 900 4480 4 chr7A.!!$R1 3580
11 TraesCS4A01G425100 chr7A 32024571 32025541 970 True 571.500000 601 88.642000 1 959 2 chr7A.!!$R2 958
12 TraesCS4A01G425100 chr6D 425081199 425082208 1009 True 1208.000000 1208 88.270000 2219 3236 1 chr6D.!!$R3 1017
13 TraesCS4A01G425100 chr6D 17968891 17969890 999 True 1123.000000 1123 87.050000 2219 3233 1 chr6D.!!$R1 1014
14 TraesCS4A01G425100 chr5B 118951758 118952758 1000 False 1042.000000 1042 85.575000 2219 3233 1 chr5B.!!$F2 1014
15 TraesCS4A01G425100 chr5B 577236829 577237689 860 False 955.000000 955 86.712000 2219 3100 1 chr5B.!!$F4 881
16 TraesCS4A01G425100 chr5B 460195101 460195984 883 True 525.000000 525 78.611000 1248 2095 1 chr5B.!!$R1 847
17 TraesCS4A01G425100 chr2B 359317121 359317981 860 True 966.000000 966 86.907000 2219 3100 1 chr2B.!!$R1 881
18 TraesCS4A01G425100 chr6B 92353615 92354259 644 False 778.000000 778 88.444000 2586 3233 1 chr6B.!!$F1 647
19 TraesCS4A01G425100 chr1B 637312650 637313533 883 True 497.000000 497 78.084000 1248 2095 1 chr1B.!!$R1 847
20 TraesCS4A01G425100 chr1B 27091641 27092525 884 False 486.000000 486 77.863000 1248 2095 1 chr1B.!!$F1 847
21 TraesCS4A01G425100 chr4B 116355129 116356012 883 True 310.500000 390 84.093000 1248 2095 2 chr4B.!!$R1 847
22 TraesCS4A01G425100 chr5A 707685241 707685841 600 False 385.000000 385 78.846000 1190 1796 1 chr5A.!!$F1 606

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
822 892 0.397254 TTCCCCGTCATCTCCTCCTC 60.397 60.0 0.00 0.0 0.00 3.71 F
1733 1967 0.102120 CAAACAGCGTTTGGGAGCAA 59.898 50.0 19.67 0.0 35.48 3.91 F
1734 1968 0.102300 AAACAGCGTTTGGGAGCAAC 59.898 50.0 5.99 0.0 35.48 4.17 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2680 3036 0.038343 GAACCCCAACTACGCACGTA 60.038 55.0 2.56 2.56 0.0 3.57 R
2949 3386 0.040425 AACAGGTGTCGAAATTGCGC 60.040 50.0 0.00 0.00 0.0 6.09 R
3704 4563 0.106967 GATGGTGGGGAAAGGAGAGC 60.107 60.0 0.00 0.00 0.0 4.09 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 3.804873 GCCTACTACACTAGAGCATTTGC 59.195 47.826 0.00 0.00 42.49 3.68
44 45 2.426842 AGAGCATTTGCCCTAGTTCC 57.573 50.000 0.00 0.00 43.38 3.62
49 50 3.006859 AGCATTTGCCCTAGTTCCAAAAC 59.993 43.478 0.00 0.00 43.38 2.43
88 89 4.634883 AGCATCACTTGAAGCAAGATACTG 59.365 41.667 13.56 2.35 43.42 2.74
93 94 5.926542 TCACTTGAAGCAAGATACTGTGTAC 59.073 40.000 13.56 0.00 43.42 2.90
132 133 4.744631 CACCAGGCAACATAGAAACAAAAC 59.255 41.667 0.00 0.00 41.41 2.43
133 134 4.404073 ACCAGGCAACATAGAAACAAAACA 59.596 37.500 0.00 0.00 41.41 2.83
134 135 5.105146 ACCAGGCAACATAGAAACAAAACAA 60.105 36.000 0.00 0.00 41.41 2.83
144 145 8.767085 ACATAGAAACAAAACAAATTGATGCAG 58.233 29.630 0.00 0.00 34.38 4.41
147 148 7.912383 AGAAACAAAACAAATTGATGCAGAAG 58.088 30.769 0.00 0.00 34.38 2.85
166 167 1.299468 GCTACACGATCCGAGCCAG 60.299 63.158 0.00 0.00 0.00 4.85
168 169 1.379443 TACACGATCCGAGCCAGGT 60.379 57.895 0.00 0.00 0.00 4.00
180 181 0.400594 AGCCAGGTAAACCAGGACAC 59.599 55.000 14.34 0.00 44.73 3.67
190 191 1.549203 ACCAGGACACATCAAATGGC 58.451 50.000 0.00 0.00 31.04 4.40
194 195 2.947652 CAGGACACATCAAATGGCTAGG 59.052 50.000 0.00 0.00 33.60 3.02
223 224 5.297776 TCACTTCTTCCTTTTCTGCTTCTTG 59.702 40.000 0.00 0.00 0.00 3.02
301 302 3.330267 CTTCCTCTTCTTCTTTCCACCG 58.670 50.000 0.00 0.00 0.00 4.94
408 409 0.889994 TGCACAATCATTCACCAGCC 59.110 50.000 0.00 0.00 0.00 4.85
416 417 5.126061 ACAATCATTCACCAGCCACTAAATC 59.874 40.000 0.00 0.00 0.00 2.17
499 568 1.675641 CTTCCCCGCCTTGTCCTTG 60.676 63.158 0.00 0.00 0.00 3.61
500 569 3.204467 TTCCCCGCCTTGTCCTTGG 62.204 63.158 0.00 0.00 0.00 3.61
821 891 0.397816 CTTCCCCGTCATCTCCTCCT 60.398 60.000 0.00 0.00 0.00 3.69
822 892 0.397254 TTCCCCGTCATCTCCTCCTC 60.397 60.000 0.00 0.00 0.00 3.71
823 893 1.834822 CCCCGTCATCTCCTCCTCC 60.835 68.421 0.00 0.00 0.00 4.30
824 894 1.231641 CCCGTCATCTCCTCCTCCT 59.768 63.158 0.00 0.00 0.00 3.69
825 895 0.825840 CCCGTCATCTCCTCCTCCTC 60.826 65.000 0.00 0.00 0.00 3.71
858 928 2.580867 CGCCGCTCTCACTACTGC 60.581 66.667 0.00 0.00 0.00 4.40
867 937 3.733337 CTCTCACTACTGCTTGGTTTGT 58.267 45.455 0.00 0.00 0.00 2.83
903 973 3.599285 CTGCCACGCGGGGTTAGAA 62.599 63.158 31.19 8.97 37.04 2.10
967 1040 0.813821 GAATTGGCACTCTGGGCTTC 59.186 55.000 0.00 0.00 0.00 3.86
970 1043 2.129555 TTGGCACTCTGGGCTTCCTC 62.130 60.000 0.00 0.00 0.00 3.71
971 1044 2.125350 GCACTCTGGGCTTCCTCG 60.125 66.667 0.00 0.00 0.00 4.63
972 1045 2.581354 CACTCTGGGCTTCCTCGG 59.419 66.667 0.00 0.00 0.00 4.63
973 1046 3.394836 ACTCTGGGCTTCCTCGGC 61.395 66.667 0.00 0.00 0.00 5.54
1126 1218 2.444895 CTCTCCTCCCCTTCCCCG 60.445 72.222 0.00 0.00 0.00 5.73
1313 1414 2.045536 GTTGGAGAGCCTGCAGGG 60.046 66.667 33.46 15.81 32.58 4.45
1376 1477 1.976132 ATCCTCATCCAGGTGCGGTG 61.976 60.000 0.00 0.00 43.95 4.94
1377 1478 2.124983 CTCATCCAGGTGCGGTGG 60.125 66.667 0.00 0.00 36.28 4.61
1380 1481 4.415150 ATCCAGGTGCGGTGGCTG 62.415 66.667 0.00 0.00 40.82 4.85
1499 1616 2.045340 GGGTGGACATGTTCGGGG 60.045 66.667 0.00 0.00 0.00 5.73
1585 1702 4.307259 TCTGGATGCCCCTTAATTCTACT 58.693 43.478 0.00 0.00 35.38 2.57
1594 1788 6.831868 TGCCCCTTAATTCTACTTTTATGACC 59.168 38.462 0.00 0.00 0.00 4.02
1599 1793 7.441458 CCTTAATTCTACTTTTATGACCCTCCG 59.559 40.741 0.00 0.00 0.00 4.63
1605 1799 3.270877 CTTTTATGACCCTCCGGACTTG 58.729 50.000 0.00 0.00 0.00 3.16
1627 1821 4.526650 TGATTGGCAGTAGTAACAGTCTGA 59.473 41.667 6.91 0.00 0.00 3.27
1651 1847 9.213799 TGAATTATGCAATTTTAAGGTGTTTCC 57.786 29.630 0.00 0.00 34.44 3.13
1653 1849 9.218440 AATTATGCAATTTTAAGGTGTTTCCTG 57.782 29.630 0.00 0.00 37.58 3.86
1664 1860 3.319122 AGGTGTTTCCTGAACTGAAATGC 59.681 43.478 0.00 0.00 46.19 3.56
1678 1874 2.159667 TGAAATGCATGCGACTTTCTCG 60.160 45.455 26.67 0.00 45.97 4.04
1729 1963 2.096248 AGAAACAAACAGCGTTTGGGA 58.904 42.857 26.31 0.00 36.72 4.37
1730 1964 2.099098 AGAAACAAACAGCGTTTGGGAG 59.901 45.455 26.31 11.07 36.72 4.30
1731 1965 0.102300 AACAAACAGCGTTTGGGAGC 59.898 50.000 26.31 0.00 33.92 4.70
1732 1966 1.034838 ACAAACAGCGTTTGGGAGCA 61.035 50.000 26.31 0.00 33.92 4.26
1733 1967 0.102120 CAAACAGCGTTTGGGAGCAA 59.898 50.000 19.67 0.00 35.48 3.91
1734 1968 0.102300 AAACAGCGTTTGGGAGCAAC 59.898 50.000 5.99 0.00 35.48 4.17
1735 1969 1.034838 AACAGCGTTTGGGAGCAACA 61.035 50.000 0.00 0.00 35.48 3.33
1736 1970 0.823356 ACAGCGTTTGGGAGCAACAT 60.823 50.000 0.00 0.00 35.48 2.71
1737 1971 0.387622 CAGCGTTTGGGAGCAACATG 60.388 55.000 0.00 0.00 35.48 3.21
1738 1972 1.080569 GCGTTTGGGAGCAACATGG 60.081 57.895 0.00 0.00 0.00 3.66
1739 1973 1.586028 CGTTTGGGAGCAACATGGG 59.414 57.895 0.00 0.00 0.00 4.00
1740 1974 1.178534 CGTTTGGGAGCAACATGGGT 61.179 55.000 0.00 0.00 0.00 4.51
1741 1975 1.884497 CGTTTGGGAGCAACATGGGTA 60.884 52.381 0.00 0.00 0.00 3.69
1742 1976 2.243810 GTTTGGGAGCAACATGGGTAA 58.756 47.619 0.00 0.00 0.00 2.85
1743 1977 2.214376 TTGGGAGCAACATGGGTAAG 57.786 50.000 0.00 0.00 0.00 2.34
1744 1978 1.072266 TGGGAGCAACATGGGTAAGT 58.928 50.000 0.00 0.00 0.00 2.24
1745 1979 2.270858 TGGGAGCAACATGGGTAAGTA 58.729 47.619 0.00 0.00 0.00 2.24
1746 1980 2.238646 TGGGAGCAACATGGGTAAGTAG 59.761 50.000 0.00 0.00 0.00 2.57
1747 1981 2.504175 GGGAGCAACATGGGTAAGTAGA 59.496 50.000 0.00 0.00 0.00 2.59
1748 1982 3.432326 GGGAGCAACATGGGTAAGTAGAG 60.432 52.174 0.00 0.00 0.00 2.43
1749 1983 3.451178 GGAGCAACATGGGTAAGTAGAGA 59.549 47.826 0.00 0.00 0.00 3.10
1750 1984 4.101741 GGAGCAACATGGGTAAGTAGAGAT 59.898 45.833 0.00 0.00 0.00 2.75
1751 1985 5.283457 AGCAACATGGGTAAGTAGAGATC 57.717 43.478 0.00 0.00 0.00 2.75
1752 1986 4.716784 AGCAACATGGGTAAGTAGAGATCA 59.283 41.667 0.00 0.00 0.00 2.92
1753 1987 5.367937 AGCAACATGGGTAAGTAGAGATCAT 59.632 40.000 0.00 0.00 0.00 2.45
1754 1988 5.468072 GCAACATGGGTAAGTAGAGATCATG 59.532 44.000 0.00 0.00 37.23 3.07
1755 1989 5.815233 ACATGGGTAAGTAGAGATCATGG 57.185 43.478 0.00 0.00 36.00 3.66
1770 2004 5.813383 AGATCATGGTGCAAATAGGATAGG 58.187 41.667 0.00 0.00 0.00 2.57
1812 2089 0.474184 CCAAGGTGGGTATAGGCTGG 59.526 60.000 0.00 0.00 32.67 4.85
1834 2111 2.186826 ACTGTTTGTCGGCACTGCC 61.187 57.895 10.35 10.35 46.75 4.85
1863 2144 7.174426 TGCATGATGGATTTAGAGCTAATTGAG 59.826 37.037 0.00 0.00 0.00 3.02
1890 2171 6.757010 TGCTCGTGAAATCTTTATTCTAGACC 59.243 38.462 0.00 0.00 0.00 3.85
1915 2223 9.046296 CCAGTTCCTACATAATCAAAGTACATC 57.954 37.037 0.00 0.00 0.00 3.06
1931 2239 8.542132 CAAAGTACATCTTGTGGATTTTTGTTG 58.458 33.333 0.00 0.00 36.40 3.33
1932 2240 6.748132 AGTACATCTTGTGGATTTTTGTTGG 58.252 36.000 0.00 0.00 31.27 3.77
1939 2247 7.432869 TCTTGTGGATTTTTGTTGGTCTTATG 58.567 34.615 0.00 0.00 0.00 1.90
1943 2251 7.016072 TGTGGATTTTTGTTGGTCTTATGGATT 59.984 33.333 0.00 0.00 0.00 3.01
1945 2253 6.818142 GGATTTTTGTTGGTCTTATGGATTGG 59.182 38.462 0.00 0.00 0.00 3.16
2008 2316 2.291465 TGCTGTTGCTGTGTTGATTCTC 59.709 45.455 0.00 0.00 40.48 2.87
2110 2444 7.485595 TGCATATTCGATGAACAAAACATTCTG 59.514 33.333 0.00 0.00 0.00 3.02
2130 2464 4.224147 TCTGTTGATTATTGACCCTTCCGA 59.776 41.667 0.00 0.00 0.00 4.55
2254 2588 5.663556 AGAGGTTAGTATCTTCTTTCCCCAG 59.336 44.000 0.00 0.00 0.00 4.45
2277 2613 7.386299 CCAGATATACAGTTTATCCACTGAAGC 59.614 40.741 7.82 0.00 46.29 3.86
2287 2623 0.109272 CCACTGAAGCTTGCATGCTG 60.109 55.000 25.94 16.46 43.24 4.41
2304 2640 1.344458 CTGTTGCAGCTAGTGAGTCG 58.656 55.000 1.17 0.00 0.00 4.18
2314 2650 4.314440 GTGAGTCGCACCAGCCCA 62.314 66.667 0.00 0.00 41.78 5.36
2336 2672 5.106157 CCAGTTTTAGCTCGATTTGGTTCAT 60.106 40.000 0.00 0.00 0.00 2.57
2381 2717 3.529533 CACTGCCAGGAATCTGACTTAG 58.470 50.000 0.00 0.00 43.49 2.18
2554 2900 2.102588 AGAATGCTACCATCACCGGTAC 59.897 50.000 6.87 0.00 40.67 3.34
2574 2920 1.134098 CGTGGCCTACATTCCCTTCAT 60.134 52.381 3.32 0.00 0.00 2.57
2575 2921 2.683742 CGTGGCCTACATTCCCTTCATT 60.684 50.000 3.32 0.00 0.00 2.57
2576 2922 3.365472 GTGGCCTACATTCCCTTCATTT 58.635 45.455 3.32 0.00 0.00 2.32
2577 2923 3.381590 GTGGCCTACATTCCCTTCATTTC 59.618 47.826 3.32 0.00 0.00 2.17
2578 2924 2.959030 GGCCTACATTCCCTTCATTTCC 59.041 50.000 0.00 0.00 0.00 3.13
2579 2925 3.373110 GGCCTACATTCCCTTCATTTCCT 60.373 47.826 0.00 0.00 0.00 3.36
2580 2926 3.885901 GCCTACATTCCCTTCATTTCCTC 59.114 47.826 0.00 0.00 0.00 3.71
2581 2927 4.464947 CCTACATTCCCTTCATTTCCTCC 58.535 47.826 0.00 0.00 0.00 4.30
2582 2928 4.079787 CCTACATTCCCTTCATTTCCTCCA 60.080 45.833 0.00 0.00 0.00 3.86
2592 2938 5.105997 CCTTCATTTCCTCCAGTTCACAATC 60.106 44.000 0.00 0.00 0.00 2.67
2595 2941 5.474532 TCATTTCCTCCAGTTCACAATCAAG 59.525 40.000 0.00 0.00 0.00 3.02
2598 2944 2.507484 CTCCAGTTCACAATCAAGGCA 58.493 47.619 0.00 0.00 0.00 4.75
2615 2961 3.350833 AGGCAATAACTTCTGCTTCAGG 58.649 45.455 0.00 0.00 38.65 3.86
2633 2980 9.733556 TGCTTCAGGAAAGAATAACATAACTTA 57.266 29.630 0.00 0.00 37.12 2.24
2649 2996 8.685838 ACATAACTTAACTCAGTTTGGCTTAA 57.314 30.769 0.00 0.00 38.07 1.85
2680 3036 4.202441 GGCAGACCTGATGATAACATTGT 58.798 43.478 0.47 0.00 36.82 2.71
2683 3039 5.050769 GCAGACCTGATGATAACATTGTACG 60.051 44.000 0.47 0.00 36.82 3.67
2685 3041 6.019559 CAGACCTGATGATAACATTGTACGTG 60.020 42.308 0.00 0.00 36.82 4.49
2693 3049 3.781341 AACATTGTACGTGCGTAGTTG 57.219 42.857 4.58 5.97 0.00 3.16
2710 3074 2.040412 AGTTGGGGTTCCTTGTCTCATC 59.960 50.000 0.00 0.00 0.00 2.92
2711 3075 0.613260 TGGGGTTCCTTGTCTCATCG 59.387 55.000 0.00 0.00 0.00 3.84
2717 3081 3.118738 GGTTCCTTGTCTCATCGTACCAT 60.119 47.826 0.00 0.00 0.00 3.55
2722 3086 8.737175 GTTCCTTGTCTCATCGTACCATATATA 58.263 37.037 0.00 0.00 0.00 0.86
2755 3120 6.809196 TGAGAATAAAACGCAACACAAAAAGT 59.191 30.769 0.00 0.00 0.00 2.66
2812 3177 8.814038 AACTTTGCAGATCTGTAATAATCCTT 57.186 30.769 24.30 8.81 35.24 3.36
2863 3299 3.722147 AGAGTACTGCATAGCAATTCCG 58.278 45.455 0.00 0.00 38.41 4.30
2887 3323 4.384846 GCATGTGATTCAGCAAAACTTCTG 59.615 41.667 0.00 0.00 0.00 3.02
2891 3327 6.494842 TGTGATTCAGCAAAACTTCTGTAAC 58.505 36.000 0.00 0.00 0.00 2.50
2900 3336 5.762045 CAAAACTTCTGTAACTGGGATGTG 58.238 41.667 0.00 0.00 0.00 3.21
2949 3386 1.134280 AGTTCTCTTGATCCATGCCGG 60.134 52.381 0.00 0.00 0.00 6.13
2970 3407 1.399727 CGCAATTTCGACACCTGTTCC 60.400 52.381 0.00 0.00 0.00 3.62
2985 3422 4.163458 ACCTGTTCCAAGAACTTACACTCA 59.837 41.667 8.77 0.00 0.00 3.41
3021 3466 6.070767 TGCAATACCTTGACTAACTAGCTTCT 60.071 38.462 0.00 0.00 34.04 2.85
3023 3468 7.980099 GCAATACCTTGACTAACTAGCTTCTTA 59.020 37.037 0.00 0.00 34.04 2.10
3070 3515 3.017442 GAGATTGGCCTGTTCCTTTACC 58.983 50.000 3.32 0.00 0.00 2.85
3111 3557 1.292242 ACTATCAGGGCTCTCCAAGGA 59.708 52.381 0.00 0.00 38.24 3.36
3150 3596 1.530293 GATCATGGCGAGCTGATCAAC 59.470 52.381 17.14 0.00 44.62 3.18
3291 3746 3.670359 CGTCGTCGAACCTATAAACACCA 60.670 47.826 0.00 0.00 39.71 4.17
3295 3750 4.448395 CGTCGAACCTATAAACACCAAACA 59.552 41.667 0.00 0.00 0.00 2.83
3321 3776 5.120830 GGCATAGTGTGTGTTCTTCTGTAAG 59.879 44.000 0.00 0.00 0.00 2.34
3322 3777 5.696724 GCATAGTGTGTGTTCTTCTGTAAGT 59.303 40.000 0.00 0.00 34.13 2.24
3363 3821 2.488087 AAGTGCACCGTAGTCTCCGC 62.488 60.000 14.63 0.00 0.00 5.54
3452 4229 9.971922 AGTTTCAGAAATATTTGACTTTCCAAG 57.028 29.630 5.17 0.00 32.90 3.61
3487 4264 4.464069 AAAGGTCAGTCTGAGTAGATGC 57.536 45.455 1.75 0.00 34.94 3.91
3488 4265 3.093057 AGGTCAGTCTGAGTAGATGCA 57.907 47.619 1.75 0.00 34.94 3.96
3490 4267 2.159170 GGTCAGTCTGAGTAGATGCACC 60.159 54.545 1.75 0.00 34.94 5.01
3491 4268 2.757868 GTCAGTCTGAGTAGATGCACCT 59.242 50.000 1.75 0.00 34.94 4.00
3499 4278 5.422012 TCTGAGTAGATGCACCTATGTTCAA 59.578 40.000 0.00 0.00 0.00 2.69
3533 4312 8.581057 TTTCGAGTTAAAAATTAAGCATTGCA 57.419 26.923 11.91 0.00 0.00 4.08
3547 4326 2.256174 CATTGCAGGCGAACAAATCAG 58.744 47.619 0.00 0.00 0.00 2.90
3548 4327 1.317613 TTGCAGGCGAACAAATCAGT 58.682 45.000 0.00 0.00 0.00 3.41
3549 4328 1.317613 TGCAGGCGAACAAATCAGTT 58.682 45.000 0.00 0.00 0.00 3.16
3550 4329 1.680735 TGCAGGCGAACAAATCAGTTT 59.319 42.857 0.00 0.00 0.00 2.66
3551 4330 2.881513 TGCAGGCGAACAAATCAGTTTA 59.118 40.909 0.00 0.00 0.00 2.01
3552 4331 3.234386 GCAGGCGAACAAATCAGTTTAC 58.766 45.455 0.00 0.00 0.00 2.01
3553 4332 3.304391 GCAGGCGAACAAATCAGTTTACA 60.304 43.478 0.00 0.00 0.00 2.41
3554 4333 4.791411 GCAGGCGAACAAATCAGTTTACAA 60.791 41.667 0.00 0.00 0.00 2.41
3555 4334 5.277825 CAGGCGAACAAATCAGTTTACAAA 58.722 37.500 0.00 0.00 0.00 2.83
3556 4335 5.746245 CAGGCGAACAAATCAGTTTACAAAA 59.254 36.000 0.00 0.00 0.00 2.44
3557 4336 5.746721 AGGCGAACAAATCAGTTTACAAAAC 59.253 36.000 0.00 0.00 0.00 2.43
3558 4337 5.746721 GGCGAACAAATCAGTTTACAAAACT 59.253 36.000 0.00 0.00 0.00 2.66
3559 4338 6.254804 GGCGAACAAATCAGTTTACAAAACTT 59.745 34.615 2.36 0.00 0.00 2.66
3560 4339 7.110511 GCGAACAAATCAGTTTACAAAACTTG 58.889 34.615 2.36 2.21 0.00 3.16
3562 4341 8.101510 CGAACAAATCAGTTTACAAAACTTGTG 58.898 33.333 2.36 0.00 45.03 3.33
3565 4344 5.590530 ATCAGTTTACAAAACTTGTGGCA 57.409 34.783 2.36 0.00 45.03 4.92
3571 4366 3.354089 ACAAAACTTGTGGCAGAATCG 57.646 42.857 0.00 0.00 43.48 3.34
3640 4499 7.661536 ATACTACTGCTAGACAAATCCTTGA 57.338 36.000 0.00 0.00 36.33 3.02
3641 4500 6.360370 ACTACTGCTAGACAAATCCTTGAA 57.640 37.500 0.00 0.00 36.33 2.69
3642 4501 6.402222 ACTACTGCTAGACAAATCCTTGAAG 58.598 40.000 0.00 0.00 36.33 3.02
3643 4502 5.489792 ACTGCTAGACAAATCCTTGAAGA 57.510 39.130 0.00 0.00 36.33 2.87
3644 4503 5.869579 ACTGCTAGACAAATCCTTGAAGAA 58.130 37.500 0.00 0.00 36.33 2.52
3645 4504 6.299141 ACTGCTAGACAAATCCTTGAAGAAA 58.701 36.000 0.00 0.00 36.33 2.52
3646 4505 6.429385 ACTGCTAGACAAATCCTTGAAGAAAG 59.571 38.462 0.00 0.00 36.33 2.62
3669 4528 3.871485 GATTGAGATCCAGTGACTTGCT 58.129 45.455 0.00 0.00 0.00 3.91
3670 4529 2.756840 TGAGATCCAGTGACTTGCTG 57.243 50.000 0.00 0.00 0.00 4.41
3671 4530 1.973515 TGAGATCCAGTGACTTGCTGT 59.026 47.619 0.00 0.00 32.41 4.40
3672 4531 2.289257 TGAGATCCAGTGACTTGCTGTG 60.289 50.000 0.00 0.00 32.41 3.66
3673 4532 1.973515 AGATCCAGTGACTTGCTGTGA 59.026 47.619 0.00 0.00 32.41 3.58
3674 4533 2.028294 AGATCCAGTGACTTGCTGTGAG 60.028 50.000 0.00 0.00 32.41 3.51
3675 4534 0.250038 TCCAGTGACTTGCTGTGAGC 60.250 55.000 0.00 0.00 42.82 4.26
3688 4547 3.544772 TGAGCAAGTCACCGGTGA 58.455 55.556 33.23 33.23 37.24 4.02
3689 4548 1.826709 TGAGCAAGTCACCGGTGAA 59.173 52.632 37.75 18.68 41.85 3.18
3690 4549 0.531974 TGAGCAAGTCACCGGTGAAC 60.532 55.000 37.75 28.65 41.85 3.18
3691 4550 0.531974 GAGCAAGTCACCGGTGAACA 60.532 55.000 37.75 15.16 41.85 3.18
3692 4551 0.532862 AGCAAGTCACCGGTGAACAG 60.533 55.000 37.75 27.99 41.85 3.16
3693 4552 0.814010 GCAAGTCACCGGTGAACAGT 60.814 55.000 37.75 19.99 41.85 3.55
3694 4553 1.539496 GCAAGTCACCGGTGAACAGTA 60.539 52.381 37.75 13.49 41.85 2.74
3695 4554 2.132762 CAAGTCACCGGTGAACAGTAC 58.867 52.381 37.75 24.33 41.85 2.73
3696 4555 0.313043 AGTCACCGGTGAACAGTACG 59.687 55.000 37.75 7.73 41.85 3.67
3699 4558 2.807895 CCGGTGAACAGTACGGCG 60.808 66.667 4.80 4.80 39.85 6.46
3700 4559 2.256158 CGGTGAACAGTACGGCGA 59.744 61.111 16.62 0.00 0.00 5.54
3701 4560 2.084681 CGGTGAACAGTACGGCGAC 61.085 63.158 16.62 7.71 0.00 5.19
3702 4561 1.288127 GGTGAACAGTACGGCGACT 59.712 57.895 16.62 10.21 0.00 4.18
3707 4566 2.202623 CAGTACGGCGACTGGCTC 60.203 66.667 22.99 4.75 42.68 4.70
3708 4567 2.361357 AGTACGGCGACTGGCTCT 60.361 61.111 16.62 0.00 42.94 4.09
3709 4568 2.102553 GTACGGCGACTGGCTCTC 59.897 66.667 16.62 0.00 42.94 3.20
3710 4569 3.138798 TACGGCGACTGGCTCTCC 61.139 66.667 16.62 0.00 42.94 3.71
3711 4570 3.640257 TACGGCGACTGGCTCTCCT 62.640 63.158 16.62 0.00 42.94 3.69
3712 4571 3.764466 CGGCGACTGGCTCTCCTT 61.764 66.667 0.00 0.00 42.94 3.36
3713 4572 2.665603 GGCGACTGGCTCTCCTTT 59.334 61.111 0.00 0.00 42.94 3.11
3714 4573 1.448717 GGCGACTGGCTCTCCTTTC 60.449 63.158 0.00 0.00 42.94 2.62
3715 4574 1.448717 GCGACTGGCTCTCCTTTCC 60.449 63.158 0.00 0.00 39.11 3.13
3716 4575 1.219393 CGACTGGCTCTCCTTTCCC 59.781 63.158 0.00 0.00 0.00 3.97
3717 4576 1.604915 GACTGGCTCTCCTTTCCCC 59.395 63.158 0.00 0.00 0.00 4.81
3718 4577 1.151810 ACTGGCTCTCCTTTCCCCA 60.152 57.895 0.00 0.00 0.00 4.96
3719 4578 1.301293 CTGGCTCTCCTTTCCCCAC 59.699 63.158 0.00 0.00 0.00 4.61
3720 4579 2.203549 CTGGCTCTCCTTTCCCCACC 62.204 65.000 0.00 0.00 0.00 4.61
3721 4580 2.231380 GGCTCTCCTTTCCCCACCA 61.231 63.158 0.00 0.00 0.00 4.17
3722 4581 1.575447 GGCTCTCCTTTCCCCACCAT 61.575 60.000 0.00 0.00 0.00 3.55
3723 4582 0.106967 GCTCTCCTTTCCCCACCATC 60.107 60.000 0.00 0.00 0.00 3.51
3724 4583 0.179000 CTCTCCTTTCCCCACCATCG 59.821 60.000 0.00 0.00 0.00 3.84
3725 4584 1.224592 CTCCTTTCCCCACCATCGG 59.775 63.158 0.00 0.00 0.00 4.18
3726 4585 1.229690 TCCTTTCCCCACCATCGGA 60.230 57.895 0.00 0.00 0.00 4.55
3727 4586 0.623324 TCCTTTCCCCACCATCGGAT 60.623 55.000 0.00 0.00 0.00 4.18
3728 4587 0.179018 CCTTTCCCCACCATCGGATC 60.179 60.000 0.00 0.00 0.00 3.36
3729 4588 0.532862 CTTTCCCCACCATCGGATCG 60.533 60.000 0.00 0.00 0.00 3.69
3730 4589 0.978667 TTTCCCCACCATCGGATCGA 60.979 55.000 0.00 0.00 41.13 3.59
3731 4590 1.399744 TTCCCCACCATCGGATCGAG 61.400 60.000 0.00 0.00 39.91 4.04
3732 4591 2.737180 CCCACCATCGGATCGAGG 59.263 66.667 0.00 0.00 39.91 4.63
3738 4597 3.274393 CATCGGATCGAGGGTCAAC 57.726 57.895 0.00 0.00 39.91 3.18
3739 4598 0.595053 CATCGGATCGAGGGTCAACG 60.595 60.000 0.00 0.00 39.91 4.10
3740 4599 1.735376 ATCGGATCGAGGGTCAACGG 61.735 60.000 0.00 0.00 39.91 4.44
3741 4600 2.412323 CGGATCGAGGGTCAACGGA 61.412 63.158 0.00 0.00 0.00 4.69
3742 4601 1.141234 GGATCGAGGGTCAACGGAC 59.859 63.158 0.00 0.00 43.55 4.79
3743 4602 1.601419 GGATCGAGGGTCAACGGACA 61.601 60.000 0.00 0.00 46.17 4.02
3744 4603 0.460311 GATCGAGGGTCAACGGACAT 59.540 55.000 0.00 0.00 46.17 3.06
3745 4604 1.679680 GATCGAGGGTCAACGGACATA 59.320 52.381 0.00 0.00 46.17 2.29
3746 4605 1.771565 TCGAGGGTCAACGGACATAT 58.228 50.000 0.00 0.00 46.17 1.78
3747 4606 1.679680 TCGAGGGTCAACGGACATATC 59.320 52.381 0.00 0.00 46.17 1.63
3748 4607 1.269621 CGAGGGTCAACGGACATATCC 60.270 57.143 0.00 0.00 46.17 2.59
3757 4616 3.355816 GGACATATCCGCGTGAACA 57.644 52.632 4.92 0.00 34.48 3.18
3758 4617 1.209128 GGACATATCCGCGTGAACAG 58.791 55.000 4.92 0.00 34.48 3.16
3759 4618 1.470979 GGACATATCCGCGTGAACAGT 60.471 52.381 4.92 2.46 34.48 3.55
3760 4619 2.223641 GGACATATCCGCGTGAACAGTA 60.224 50.000 4.92 0.00 34.48 2.74
3761 4620 2.787680 GACATATCCGCGTGAACAGTAC 59.212 50.000 4.92 0.00 0.00 2.73
3762 4621 2.124903 CATATCCGCGTGAACAGTACC 58.875 52.381 4.92 0.00 0.00 3.34
3763 4622 0.457035 TATCCGCGTGAACAGTACCC 59.543 55.000 4.92 0.00 0.00 3.69
3764 4623 1.255667 ATCCGCGTGAACAGTACCCT 61.256 55.000 4.92 0.00 0.00 4.34
3765 4624 1.736645 CCGCGTGAACAGTACCCTG 60.737 63.158 4.92 0.00 44.68 4.45
3766 4625 1.287815 CGCGTGAACAGTACCCTGA 59.712 57.895 0.00 0.00 41.50 3.86
3767 4626 0.732880 CGCGTGAACAGTACCCTGAG 60.733 60.000 0.00 0.00 41.50 3.35
3768 4627 1.014564 GCGTGAACAGTACCCTGAGC 61.015 60.000 0.00 0.00 41.50 4.26
3769 4628 0.603569 CGTGAACAGTACCCTGAGCT 59.396 55.000 0.00 0.00 41.50 4.09
3770 4629 1.816835 CGTGAACAGTACCCTGAGCTA 59.183 52.381 0.00 0.00 41.50 3.32
3771 4630 2.415625 CGTGAACAGTACCCTGAGCTAC 60.416 54.545 0.00 0.00 41.50 3.58
3772 4631 2.561419 GTGAACAGTACCCTGAGCTACA 59.439 50.000 0.00 0.00 41.50 2.74
3773 4632 2.826128 TGAACAGTACCCTGAGCTACAG 59.174 50.000 6.28 6.28 41.50 2.74
3774 4633 2.606751 ACAGTACCCTGAGCTACAGT 57.393 50.000 10.86 0.00 44.40 3.55
3775 4634 2.171840 ACAGTACCCTGAGCTACAGTG 58.828 52.381 10.86 0.00 44.40 3.66
3776 4635 1.134965 CAGTACCCTGAGCTACAGTGC 60.135 57.143 10.86 0.47 44.40 4.40
3777 4636 0.175989 GTACCCTGAGCTACAGTGCC 59.824 60.000 10.86 0.00 44.40 5.01
3778 4637 0.041238 TACCCTGAGCTACAGTGCCT 59.959 55.000 10.86 0.00 44.40 4.75
3779 4638 0.838122 ACCCTGAGCTACAGTGCCTT 60.838 55.000 10.86 0.00 44.40 4.35
3780 4639 0.392193 CCCTGAGCTACAGTGCCTTG 60.392 60.000 10.86 0.00 44.40 3.61
3781 4640 0.322975 CCTGAGCTACAGTGCCTTGT 59.677 55.000 10.86 0.00 44.40 3.16
3782 4641 1.674221 CCTGAGCTACAGTGCCTTGTC 60.674 57.143 10.86 0.00 44.40 3.18
3783 4642 1.274728 CTGAGCTACAGTGCCTTGTCT 59.725 52.381 0.00 0.00 41.30 3.41
3784 4643 2.493675 CTGAGCTACAGTGCCTTGTCTA 59.506 50.000 0.00 0.00 41.30 2.59
3785 4644 2.231478 TGAGCTACAGTGCCTTGTCTAC 59.769 50.000 0.00 0.00 32.56 2.59
3786 4645 2.231478 GAGCTACAGTGCCTTGTCTACA 59.769 50.000 0.00 0.00 32.56 2.74
3787 4646 2.834549 AGCTACAGTGCCTTGTCTACAT 59.165 45.455 0.00 0.00 32.56 2.29
3788 4647 4.023980 AGCTACAGTGCCTTGTCTACATA 58.976 43.478 0.00 0.00 32.56 2.29
3789 4648 4.466370 AGCTACAGTGCCTTGTCTACATAA 59.534 41.667 0.00 0.00 32.56 1.90
3790 4649 4.806247 GCTACAGTGCCTTGTCTACATAAG 59.194 45.833 0.00 0.00 32.56 1.73
3791 4650 5.394224 GCTACAGTGCCTTGTCTACATAAGA 60.394 44.000 0.00 0.00 32.56 2.10
3792 4651 5.683876 ACAGTGCCTTGTCTACATAAGAT 57.316 39.130 0.00 0.00 36.36 2.40
3793 4652 6.054860 ACAGTGCCTTGTCTACATAAGATT 57.945 37.500 0.00 0.00 36.36 2.40
3794 4653 5.877012 ACAGTGCCTTGTCTACATAAGATTG 59.123 40.000 0.00 0.00 36.36 2.67
3795 4654 4.878397 AGTGCCTTGTCTACATAAGATTGC 59.122 41.667 0.00 0.00 36.36 3.56
3796 4655 4.035675 GTGCCTTGTCTACATAAGATTGCC 59.964 45.833 0.00 0.00 36.36 4.52
3797 4656 3.565902 GCCTTGTCTACATAAGATTGCCC 59.434 47.826 0.00 0.00 36.36 5.36
3798 4657 4.780815 CCTTGTCTACATAAGATTGCCCA 58.219 43.478 0.00 0.00 36.36 5.36
3799 4658 4.576463 CCTTGTCTACATAAGATTGCCCAC 59.424 45.833 0.00 0.00 36.36 4.61
3800 4659 4.835284 TGTCTACATAAGATTGCCCACA 57.165 40.909 0.00 0.00 36.36 4.17
3801 4660 4.769688 TGTCTACATAAGATTGCCCACAG 58.230 43.478 0.00 0.00 36.36 3.66
3802 4661 4.225042 TGTCTACATAAGATTGCCCACAGT 59.775 41.667 0.00 0.00 36.36 3.55
3803 4662 5.423931 TGTCTACATAAGATTGCCCACAGTA 59.576 40.000 0.00 0.00 36.36 2.74
3804 4663 5.753921 GTCTACATAAGATTGCCCACAGTAC 59.246 44.000 0.00 0.00 36.36 2.73
3805 4664 3.886123 ACATAAGATTGCCCACAGTACC 58.114 45.455 0.00 0.00 0.00 3.34
3806 4665 3.214328 CATAAGATTGCCCACAGTACCC 58.786 50.000 0.00 0.00 0.00 3.69
3807 4666 0.331616 AAGATTGCCCACAGTACCCC 59.668 55.000 0.00 0.00 0.00 4.95
3808 4667 1.451387 GATTGCCCACAGTACCCCG 60.451 63.158 0.00 0.00 0.00 5.73
3809 4668 2.886730 GATTGCCCACAGTACCCCGG 62.887 65.000 0.00 0.00 0.00 5.73
3810 4669 4.966274 TGCCCACAGTACCCCGGT 62.966 66.667 0.00 0.00 0.00 5.28
3811 4670 4.091939 GCCCACAGTACCCCGGTC 62.092 72.222 0.00 0.00 0.00 4.79
3812 4671 2.284405 CCCACAGTACCCCGGTCT 60.284 66.667 0.00 0.00 0.00 3.85
3813 4672 1.000739 CCCACAGTACCCCGGTCTA 59.999 63.158 0.00 0.00 0.00 2.59
3814 4673 1.325476 CCCACAGTACCCCGGTCTAC 61.325 65.000 0.00 0.00 0.00 2.59
3815 4674 0.612732 CCACAGTACCCCGGTCTACA 60.613 60.000 0.00 0.00 0.00 2.74
3816 4675 0.815734 CACAGTACCCCGGTCTACAG 59.184 60.000 0.00 0.00 0.00 2.74
3817 4676 0.407139 ACAGTACCCCGGTCTACAGT 59.593 55.000 0.00 0.00 0.00 3.55
3818 4677 0.815734 CAGTACCCCGGTCTACAGTG 59.184 60.000 0.00 0.00 0.00 3.66
3819 4678 0.407139 AGTACCCCGGTCTACAGTGT 59.593 55.000 0.00 0.00 0.00 3.55
3820 4679 0.813821 GTACCCCGGTCTACAGTGTC 59.186 60.000 0.00 0.00 0.00 3.67
3821 4680 0.405198 TACCCCGGTCTACAGTGTCA 59.595 55.000 0.00 0.00 0.00 3.58
3822 4681 0.898789 ACCCCGGTCTACAGTGTCAG 60.899 60.000 0.00 0.00 0.00 3.51
3823 4682 1.215647 CCCGGTCTACAGTGTCAGC 59.784 63.158 0.00 0.00 0.00 4.26
3824 4683 1.251527 CCCGGTCTACAGTGTCAGCT 61.252 60.000 0.00 0.00 0.00 4.24
3825 4684 1.460504 CCGGTCTACAGTGTCAGCTA 58.539 55.000 0.00 0.00 0.00 3.32
3826 4685 1.132643 CCGGTCTACAGTGTCAGCTAC 59.867 57.143 0.00 0.00 0.00 3.58
3827 4686 1.810755 CGGTCTACAGTGTCAGCTACA 59.189 52.381 0.00 0.00 35.06 2.74
3828 4687 2.159503 CGGTCTACAGTGTCAGCTACAG 60.160 54.545 0.00 0.00 39.29 2.74
3829 4688 2.820787 GGTCTACAGTGTCAGCTACAGT 59.179 50.000 0.00 0.00 42.76 3.55
3835 4694 3.819564 AGTGTCAGCTACAGTGTTTCA 57.180 42.857 0.00 0.00 40.38 2.69
3836 4695 4.342862 AGTGTCAGCTACAGTGTTTCAT 57.657 40.909 0.00 0.00 40.38 2.57
3837 4696 4.060900 AGTGTCAGCTACAGTGTTTCATG 58.939 43.478 0.00 0.00 40.38 3.07
3838 4697 2.807967 TGTCAGCTACAGTGTTTCATGC 59.192 45.455 0.00 0.00 33.01 4.06
3839 4698 3.070018 GTCAGCTACAGTGTTTCATGCT 58.930 45.455 0.00 1.46 0.00 3.79
3840 4699 3.069289 TCAGCTACAGTGTTTCATGCTG 58.931 45.455 19.39 19.39 45.14 4.41
3841 4700 1.808945 AGCTACAGTGTTTCATGCTGC 59.191 47.619 0.00 0.00 33.87 5.25
3842 4701 1.536766 GCTACAGTGTTTCATGCTGCA 59.463 47.619 4.13 4.13 33.87 4.41
3843 4702 2.163010 GCTACAGTGTTTCATGCTGCAT 59.837 45.455 9.81 9.81 33.87 3.96
3844 4703 3.730061 GCTACAGTGTTTCATGCTGCATC 60.730 47.826 13.10 1.92 33.87 3.91
3845 4704 2.232399 ACAGTGTTTCATGCTGCATCA 58.768 42.857 13.10 4.84 33.87 3.07
3846 4705 2.030540 ACAGTGTTTCATGCTGCATCAC 60.031 45.455 18.95 18.95 33.87 3.06
3847 4706 2.228103 CAGTGTTTCATGCTGCATCACT 59.772 45.455 21.90 21.90 35.49 3.41
3848 4707 2.486982 AGTGTTTCATGCTGCATCACTC 59.513 45.455 21.90 15.21 30.43 3.51
3849 4708 2.227149 GTGTTTCATGCTGCATCACTCA 59.773 45.455 13.10 7.48 0.00 3.41
3850 4709 2.885894 TGTTTCATGCTGCATCACTCAA 59.114 40.909 13.10 0.00 0.00 3.02
3851 4710 3.508402 TGTTTCATGCTGCATCACTCAAT 59.492 39.130 13.10 0.00 0.00 2.57
3852 4711 4.103357 GTTTCATGCTGCATCACTCAATC 58.897 43.478 13.10 0.00 0.00 2.67
3853 4712 3.277142 TCATGCTGCATCACTCAATCT 57.723 42.857 13.10 0.00 0.00 2.40
3854 4713 2.943033 TCATGCTGCATCACTCAATCTG 59.057 45.455 13.10 0.00 0.00 2.90
3855 4714 2.773993 TGCTGCATCACTCAATCTGA 57.226 45.000 0.00 0.00 0.00 3.27
3876 4735 3.331293 CCCCCTAATCCAACGGCT 58.669 61.111 0.00 0.00 0.00 5.52
3877 4736 1.152963 CCCCCTAATCCAACGGCTG 60.153 63.158 0.00 0.00 0.00 4.85
3878 4737 1.823899 CCCCTAATCCAACGGCTGC 60.824 63.158 0.00 0.00 0.00 5.25
3879 4738 1.823899 CCCTAATCCAACGGCTGCC 60.824 63.158 9.11 9.11 0.00 4.85
3880 4739 1.077787 CCTAATCCAACGGCTGCCA 60.078 57.895 20.29 0.00 0.00 4.92
3881 4740 1.097547 CCTAATCCAACGGCTGCCAG 61.098 60.000 20.29 13.76 0.00 4.85
3882 4741 1.718757 CTAATCCAACGGCTGCCAGC 61.719 60.000 20.29 8.55 41.46 4.85
3891 4750 2.999063 GCTGCCAGCCCACCAATT 60.999 61.111 5.06 0.00 34.48 2.32
3892 4751 1.682005 GCTGCCAGCCCACCAATTA 60.682 57.895 5.06 0.00 34.48 1.40
3893 4752 1.948721 GCTGCCAGCCCACCAATTAC 61.949 60.000 5.06 0.00 34.48 1.89
3894 4753 1.656818 CTGCCAGCCCACCAATTACG 61.657 60.000 0.00 0.00 0.00 3.18
3895 4754 3.063743 GCCAGCCCACCAATTACGC 62.064 63.158 0.00 0.00 0.00 4.42
3896 4755 2.414785 CCAGCCCACCAATTACGCC 61.415 63.158 0.00 0.00 0.00 5.68
3897 4756 2.437716 AGCCCACCAATTACGCCG 60.438 61.111 0.00 0.00 0.00 6.46
3898 4757 2.748647 GCCCACCAATTACGCCGT 60.749 61.111 0.00 0.00 0.00 5.68
3899 4758 3.046497 GCCCACCAATTACGCCGTG 62.046 63.158 0.00 0.00 0.00 4.94
3900 4759 2.483288 CCACCAATTACGCCGTGC 59.517 61.111 0.00 0.00 0.00 5.34
3901 4760 2.483288 CACCAATTACGCCGTGCC 59.517 61.111 0.00 0.00 0.00 5.01
3902 4761 2.038269 CACCAATTACGCCGTGCCT 61.038 57.895 0.00 0.00 0.00 4.75
3903 4762 1.302993 ACCAATTACGCCGTGCCTT 60.303 52.632 0.00 0.00 0.00 4.35
3904 4763 1.136565 CCAATTACGCCGTGCCTTG 59.863 57.895 0.00 0.58 0.00 3.61
3905 4764 1.514014 CAATTACGCCGTGCCTTGC 60.514 57.895 0.00 0.00 0.00 4.01
3906 4765 1.674322 AATTACGCCGTGCCTTGCT 60.674 52.632 0.00 0.00 0.00 3.91
3907 4766 1.922135 AATTACGCCGTGCCTTGCTG 61.922 55.000 0.00 0.00 0.00 4.41
3908 4767 3.818121 TTACGCCGTGCCTTGCTGT 62.818 57.895 0.00 0.00 0.00 4.40
3925 4784 4.802051 TGGGCAAGGCGCTGGATC 62.802 66.667 7.64 0.00 42.10 3.36
3926 4785 4.496336 GGGCAAGGCGCTGGATCT 62.496 66.667 7.64 0.00 41.91 2.75
3927 4786 2.899339 GGCAAGGCGCTGGATCTC 60.899 66.667 7.64 0.00 41.91 2.75
3928 4787 2.124983 GCAAGGCGCTGGATCTCA 60.125 61.111 7.64 0.00 37.77 3.27
3929 4788 1.746615 GCAAGGCGCTGGATCTCAA 60.747 57.895 7.64 0.00 37.77 3.02
3930 4789 1.099879 GCAAGGCGCTGGATCTCAAT 61.100 55.000 7.64 0.00 37.77 2.57
3931 4790 0.942962 CAAGGCGCTGGATCTCAATC 59.057 55.000 7.64 0.00 0.00 2.67
3932 4791 0.543277 AAGGCGCTGGATCTCAATCA 59.457 50.000 7.64 0.00 33.21 2.57
3933 4792 0.763652 AGGCGCTGGATCTCAATCAT 59.236 50.000 7.64 0.00 33.21 2.45
3934 4793 0.873054 GGCGCTGGATCTCAATCATG 59.127 55.000 7.64 0.00 33.21 3.07
3939 4798 4.124970 CGCTGGATCTCAATCATGAAGAA 58.875 43.478 0.00 0.00 34.49 2.52
4056 4926 2.960170 GTGCTAGTCACGGTCGGT 59.040 61.111 2.28 0.00 35.76 4.69
4112 4982 5.015817 TCCTGTTGGAAATTAGGTGGGTAAT 59.984 40.000 0.00 0.00 39.87 1.89
4114 4984 6.147437 TGTTGGAAATTAGGTGGGTAATCT 57.853 37.500 0.00 0.00 0.00 2.40
4115 4985 6.557568 TGTTGGAAATTAGGTGGGTAATCTT 58.442 36.000 0.00 0.00 0.00 2.40
4118 4988 8.847196 GTTGGAAATTAGGTGGGTAATCTTATC 58.153 37.037 0.00 0.00 0.00 1.75
4129 4999 5.163343 TGGGTAATCTTATCCAAACCGAGAG 60.163 44.000 0.00 0.00 40.84 3.20
4169 5039 6.739331 TGGTTAACCCAAATCTTGTTTGAT 57.261 33.333 21.97 0.00 41.50 2.57
4172 5042 8.875168 TGGTTAACCCAAATCTTGTTTGATAAT 58.125 29.630 21.97 0.00 41.50 1.28
4214 5086 5.445964 ACCTGTTGGTAATGTTATGGATCC 58.554 41.667 4.20 4.20 46.43 3.36
4228 5100 0.391263 GGATCCGTGAAGGTGTCCAC 60.391 60.000 0.00 0.00 41.91 4.02
4331 5208 5.705441 TCCTCAAATGACACATGTTACCTTC 59.295 40.000 0.00 0.00 0.00 3.46
4396 5273 9.250624 GAATAAATCTTGCTACTACGAACAGAT 57.749 33.333 0.00 0.00 0.00 2.90
4443 5320 6.309980 CGCTCTAAAGTATGCATCTTGATAGG 59.690 42.308 0.19 3.30 0.00 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 2.350498 CGCATACGTTTTGGAACTAGGG 59.650 50.000 0.00 0.00 33.51 3.53
44 45 6.244999 TGCTAAGTTAATCGCATACGTTTTG 58.755 36.000 0.00 0.00 41.18 2.44
49 50 5.402568 AGTGATGCTAAGTTAATCGCATACG 59.597 40.000 7.80 0.00 42.60 3.06
88 89 5.063312 GGTGCAAATAAAATGCCATGTACAC 59.937 40.000 0.00 0.00 43.16 2.90
93 94 3.623960 CCTGGTGCAAATAAAATGCCATG 59.376 43.478 0.00 0.00 43.16 3.66
132 133 4.418392 GTGTAGCCTTCTGCATCAATTTG 58.582 43.478 0.00 0.00 44.83 2.32
133 134 3.127548 CGTGTAGCCTTCTGCATCAATTT 59.872 43.478 0.00 0.00 44.83 1.82
134 135 2.679837 CGTGTAGCCTTCTGCATCAATT 59.320 45.455 0.00 0.00 44.83 2.32
144 145 0.595310 GCTCGGATCGTGTAGCCTTC 60.595 60.000 0.00 0.00 0.00 3.46
166 167 4.082245 CCATTTGATGTGTCCTGGTTTACC 60.082 45.833 0.00 0.00 0.00 2.85
168 169 3.509575 GCCATTTGATGTGTCCTGGTTTA 59.490 43.478 0.00 0.00 0.00 2.01
180 181 3.018856 TGAGTTGCCTAGCCATTTGATG 58.981 45.455 0.00 0.00 0.00 3.07
190 191 3.971245 AGGAAGAAGTGAGTTGCCTAG 57.029 47.619 0.00 0.00 0.00 3.02
194 195 4.791088 GCAGAAAAGGAAGAAGTGAGTTGC 60.791 45.833 0.00 0.00 0.00 4.17
301 302 3.824510 GAGAACGCGAACGCCGAC 61.825 66.667 15.93 5.09 45.53 4.79
370 371 0.467290 AGAAAACCAAGAAGCCGGCA 60.467 50.000 31.54 0.00 0.00 5.69
372 373 0.039165 GCAGAAAACCAAGAAGCCGG 60.039 55.000 0.00 0.00 0.00 6.13
374 375 1.408702 TGTGCAGAAAACCAAGAAGCC 59.591 47.619 0.00 0.00 0.00 4.35
408 409 3.674138 GCCTGTGCCATTGTGATTTAGTG 60.674 47.826 0.00 0.00 0.00 2.74
416 417 2.191354 CTGTCGCCTGTGCCATTGTG 62.191 60.000 0.00 0.00 0.00 3.33
429 430 3.201726 TGCAAAATTAGCTTCTGTCGC 57.798 42.857 0.00 0.00 0.00 5.19
431 432 4.848299 CGTCTTGCAAAATTAGCTTCTGTC 59.152 41.667 0.00 0.00 0.00 3.51
584 653 0.112801 ATACCTCCTCTCCTACGGCC 59.887 60.000 0.00 0.00 0.00 6.13
615 685 0.739112 CGCTTCCTCAGGTGAGCTTC 60.739 60.000 16.46 0.00 40.75 3.86
841 911 2.549611 AAGCAGTAGTGAGAGCGGCG 62.550 60.000 0.51 0.51 0.00 6.46
842 912 1.080995 CAAGCAGTAGTGAGAGCGGC 61.081 60.000 0.42 0.00 0.00 6.53
843 913 0.459237 CCAAGCAGTAGTGAGAGCGG 60.459 60.000 0.42 0.00 0.00 5.52
845 915 2.464157 AACCAAGCAGTAGTGAGAGC 57.536 50.000 0.42 0.00 0.00 4.09
846 916 3.733337 ACAAACCAAGCAGTAGTGAGAG 58.267 45.455 0.42 0.00 0.00 3.20
847 917 3.838244 ACAAACCAAGCAGTAGTGAGA 57.162 42.857 0.42 0.00 0.00 3.27
848 918 4.261197 GGAAACAAACCAAGCAGTAGTGAG 60.261 45.833 0.42 0.00 0.00 3.51
849 919 3.630312 GGAAACAAACCAAGCAGTAGTGA 59.370 43.478 0.42 0.00 0.00 3.41
850 920 3.548014 CGGAAACAAACCAAGCAGTAGTG 60.548 47.826 0.00 0.00 0.00 2.74
851 921 2.616842 CGGAAACAAACCAAGCAGTAGT 59.383 45.455 0.00 0.00 0.00 2.73
852 922 2.604614 GCGGAAACAAACCAAGCAGTAG 60.605 50.000 0.00 0.00 0.00 2.57
853 923 1.335496 GCGGAAACAAACCAAGCAGTA 59.665 47.619 0.00 0.00 0.00 2.74
854 924 0.102300 GCGGAAACAAACCAAGCAGT 59.898 50.000 0.00 0.00 0.00 4.40
858 928 1.660264 GCGGCGGAAACAAACCAAG 60.660 57.895 9.78 0.00 0.00 3.61
889 959 0.736325 CTCTGTTCTAACCCCGCGTG 60.736 60.000 4.92 0.00 0.00 5.34
897 967 1.135333 CCTCGCCTCCTCTGTTCTAAC 59.865 57.143 0.00 0.00 0.00 2.34
903 973 0.251653 TGTAACCTCGCCTCCTCTGT 60.252 55.000 0.00 0.00 0.00 3.41
948 1021 0.813821 GAAGCCCAGAGTGCCAATTC 59.186 55.000 0.00 0.00 0.00 2.17
983 1056 1.531748 CCACTTATCATGGGCCGGT 59.468 57.895 1.90 0.00 33.18 5.28
995 1068 1.745115 GCGAGCCATGTGCCACTTA 60.745 57.895 0.00 0.00 42.71 2.24
1027 1100 0.172803 GCCATTTCTGCTGCTGGAAG 59.827 55.000 8.85 0.00 0.00 3.46
1031 1104 2.488355 CGGCCATTTCTGCTGCTG 59.512 61.111 2.24 0.00 0.00 4.41
1293 1394 1.376942 CTGCAGGCTCTCCAACCAG 60.377 63.158 5.57 0.00 33.74 4.00
1297 1398 3.333219 CCCCTGCAGGCTCTCCAA 61.333 66.667 28.39 0.00 33.74 3.53
1376 1477 2.828480 GAAAGAGGGGAGCACCAGCC 62.828 65.000 1.58 0.00 43.56 4.85
1377 1478 1.377856 GAAAGAGGGGAGCACCAGC 60.378 63.158 1.58 0.00 42.91 4.85
1380 1481 1.604915 GGAGAAAGAGGGGAGCACC 59.395 63.158 0.00 0.00 39.11 5.01
1468 1575 4.415150 ACCCCCTGCACGCATCAG 62.415 66.667 0.00 0.00 0.00 2.90
1545 1662 1.002134 ATCACCTTGGCCTTGGTCG 60.002 57.895 15.72 11.95 33.75 4.79
1599 1793 4.575885 TGTTACTACTGCCAATCAAGTCC 58.424 43.478 0.00 0.00 0.00 3.85
1605 1799 5.073311 TCAGACTGTTACTACTGCCAATC 57.927 43.478 1.59 0.00 0.00 2.67
1651 1847 2.161012 AGTCGCATGCATTTCAGTTCAG 59.839 45.455 19.57 0.00 0.00 3.02
1653 1849 2.907910 AGTCGCATGCATTTCAGTTC 57.092 45.000 19.57 0.00 0.00 3.01
1678 1874 5.881443 TCCTAACAGAGAACTAGCTAGACAC 59.119 44.000 27.45 17.06 0.00 3.67
1729 1963 4.716784 TGATCTCTACTTACCCATGTTGCT 59.283 41.667 0.00 0.00 0.00 3.91
1730 1964 5.023533 TGATCTCTACTTACCCATGTTGC 57.976 43.478 0.00 0.00 0.00 4.17
1731 1965 5.994054 CCATGATCTCTACTTACCCATGTTG 59.006 44.000 0.00 0.00 0.00 3.33
1732 1966 5.667626 ACCATGATCTCTACTTACCCATGTT 59.332 40.000 0.00 0.00 0.00 2.71
1733 1967 5.070981 CACCATGATCTCTACTTACCCATGT 59.929 44.000 0.00 0.00 0.00 3.21
1734 1968 5.545588 CACCATGATCTCTACTTACCCATG 58.454 45.833 0.00 0.00 0.00 3.66
1735 1969 4.040952 GCACCATGATCTCTACTTACCCAT 59.959 45.833 0.00 0.00 0.00 4.00
1736 1970 3.388024 GCACCATGATCTCTACTTACCCA 59.612 47.826 0.00 0.00 0.00 4.51
1737 1971 3.388024 TGCACCATGATCTCTACTTACCC 59.612 47.826 0.00 0.00 0.00 3.69
1738 1972 4.672587 TGCACCATGATCTCTACTTACC 57.327 45.455 0.00 0.00 0.00 2.85
1739 1973 7.386299 CCTATTTGCACCATGATCTCTACTTAC 59.614 40.741 0.00 0.00 0.00 2.34
1740 1974 7.290014 TCCTATTTGCACCATGATCTCTACTTA 59.710 37.037 0.00 0.00 0.00 2.24
1741 1975 6.100279 TCCTATTTGCACCATGATCTCTACTT 59.900 38.462 0.00 0.00 0.00 2.24
1742 1976 5.604231 TCCTATTTGCACCATGATCTCTACT 59.396 40.000 0.00 0.00 0.00 2.57
1743 1977 5.858381 TCCTATTTGCACCATGATCTCTAC 58.142 41.667 0.00 0.00 0.00 2.59
1744 1978 6.692849 ATCCTATTTGCACCATGATCTCTA 57.307 37.500 0.00 0.00 0.00 2.43
1745 1979 5.579753 ATCCTATTTGCACCATGATCTCT 57.420 39.130 0.00 0.00 0.00 3.10
1746 1980 5.879223 CCTATCCTATTTGCACCATGATCTC 59.121 44.000 0.00 0.00 0.00 2.75
1747 1981 5.549228 TCCTATCCTATTTGCACCATGATCT 59.451 40.000 0.00 0.00 0.00 2.75
1748 1982 5.645497 GTCCTATCCTATTTGCACCATGATC 59.355 44.000 0.00 0.00 0.00 2.92
1749 1983 5.073554 TGTCCTATCCTATTTGCACCATGAT 59.926 40.000 0.00 0.00 0.00 2.45
1750 1984 4.411869 TGTCCTATCCTATTTGCACCATGA 59.588 41.667 0.00 0.00 0.00 3.07
1751 1985 4.717877 TGTCCTATCCTATTTGCACCATG 58.282 43.478 0.00 0.00 0.00 3.66
1752 1986 4.202503 CCTGTCCTATCCTATTTGCACCAT 60.203 45.833 0.00 0.00 0.00 3.55
1753 1987 3.136443 CCTGTCCTATCCTATTTGCACCA 59.864 47.826 0.00 0.00 0.00 4.17
1754 1988 3.496870 CCCTGTCCTATCCTATTTGCACC 60.497 52.174 0.00 0.00 0.00 5.01
1755 1989 3.496870 CCCCTGTCCTATCCTATTTGCAC 60.497 52.174 0.00 0.00 0.00 4.57
1770 2004 2.905676 ATCCCAGCTCCTCCCCTGTC 62.906 65.000 0.00 0.00 0.00 3.51
1812 2089 1.014352 AGTGCCGACAAACAGTGTTC 58.986 50.000 9.40 0.00 41.96 3.18
1834 2111 5.769484 AGCTCTAAATCCATCATGCAAAG 57.231 39.130 0.00 0.00 0.00 2.77
1863 2144 8.484008 GTCTAGAATAAAGATTTCACGAGCATC 58.516 37.037 0.00 0.00 0.00 3.91
1890 2171 9.823647 AGATGTACTTTGATTATGTAGGAACTG 57.176 33.333 0.00 0.00 41.52 3.16
1915 2223 6.646240 CCATAAGACCAACAAAAATCCACAAG 59.354 38.462 0.00 0.00 0.00 3.16
1939 2247 8.689972 CCTGGAATCTAAATATATTGCCAATCC 58.310 37.037 0.00 5.94 0.00 3.01
1943 2251 7.341885 TCCCTGGAATCTAAATATATTGCCA 57.658 36.000 0.00 0.63 0.00 4.92
1945 2253 9.247861 ACAATCCCTGGAATCTAAATATATTGC 57.752 33.333 0.00 0.00 0.00 3.56
2008 2316 1.341209 GTTTGCCCTTTGGACTCCAAG 59.659 52.381 10.48 5.65 44.84 3.61
2071 2381 0.740737 ATATGCAACCTTTCGCTGCC 59.259 50.000 0.00 0.00 35.13 4.85
2110 2444 5.890424 TTTCGGAAGGGTCAATAATCAAC 57.110 39.130 0.00 0.00 0.00 3.18
2130 2464 5.248380 AGGAACTCTAGCCTGAACATTTT 57.752 39.130 0.00 0.00 32.06 1.82
2254 2588 8.768955 CAAGCTTCAGTGGATAAACTGTATATC 58.231 37.037 0.00 0.00 46.33 1.63
2287 2623 0.667487 TGCGACTCACTAGCTGCAAC 60.667 55.000 1.02 0.00 0.00 4.17
2304 2640 0.895559 AGCTAAAACTGGGCTGGTGC 60.896 55.000 0.00 0.00 34.82 5.01
2308 2644 2.029838 ATCGAGCTAAAACTGGGCTG 57.970 50.000 0.00 0.00 36.37 4.85
2314 2650 7.606456 TCTTATGAACCAAATCGAGCTAAAACT 59.394 33.333 0.00 0.00 0.00 2.66
2336 2672 5.470368 GCAGCGAGATTGGTATATGTCTTA 58.530 41.667 0.00 0.00 0.00 2.10
2554 2900 0.251916 TGAAGGGAATGTAGGCCACG 59.748 55.000 5.01 0.00 0.00 4.94
2562 2908 3.334881 ACTGGAGGAAATGAAGGGAATGT 59.665 43.478 0.00 0.00 0.00 2.71
2574 2920 4.144297 CCTTGATTGTGAACTGGAGGAAA 58.856 43.478 0.00 0.00 0.00 3.13
2575 2921 3.754965 CCTTGATTGTGAACTGGAGGAA 58.245 45.455 0.00 0.00 0.00 3.36
2576 2922 2.553028 GCCTTGATTGTGAACTGGAGGA 60.553 50.000 0.00 0.00 0.00 3.71
2577 2923 1.815003 GCCTTGATTGTGAACTGGAGG 59.185 52.381 0.00 0.00 0.00 4.30
2578 2924 2.507484 TGCCTTGATTGTGAACTGGAG 58.493 47.619 0.00 0.00 0.00 3.86
2579 2925 2.655090 TGCCTTGATTGTGAACTGGA 57.345 45.000 0.00 0.00 0.00 3.86
2580 2926 3.947910 ATTGCCTTGATTGTGAACTGG 57.052 42.857 0.00 0.00 0.00 4.00
2581 2927 6.017400 AGTTATTGCCTTGATTGTGAACTG 57.983 37.500 0.00 0.00 0.00 3.16
2582 2928 6.491403 AGAAGTTATTGCCTTGATTGTGAACT 59.509 34.615 0.00 0.00 0.00 3.01
2592 2938 4.380233 CCTGAAGCAGAAGTTATTGCCTTG 60.380 45.833 7.92 0.00 41.17 3.61
2595 2941 3.347216 TCCTGAAGCAGAAGTTATTGCC 58.653 45.455 7.92 0.00 41.17 4.52
2598 2944 9.520515 TTATTCTTTCCTGAAGCAGAAGTTATT 57.479 29.630 0.00 0.00 35.24 1.40
2633 2980 3.066760 GTGCACTTAAGCCAAACTGAGTT 59.933 43.478 10.32 0.00 0.00 3.01
2640 2987 1.327303 CCCAGTGCACTTAAGCCAAA 58.673 50.000 18.94 0.00 0.00 3.28
2680 3036 0.038343 GAACCCCAACTACGCACGTA 60.038 55.000 2.56 2.56 0.00 3.57
2683 3039 0.250597 AAGGAACCCCAACTACGCAC 60.251 55.000 0.00 0.00 33.88 5.34
2685 3041 0.250597 ACAAGGAACCCCAACTACGC 60.251 55.000 0.00 0.00 33.88 4.42
2693 3049 0.613777 ACGATGAGACAAGGAACCCC 59.386 55.000 0.00 0.00 0.00 4.95
2722 3086 8.113675 GTGTTGCGTTTTATTCTCAACAAAAAT 58.886 29.630 7.54 0.00 45.46 1.82
2737 3101 7.042658 TGTTTTCTACTTTTTGTGTTGCGTTTT 60.043 29.630 0.00 0.00 0.00 2.43
2739 3103 5.921408 TGTTTTCTACTTTTTGTGTTGCGTT 59.079 32.000 0.00 0.00 0.00 4.84
2755 3120 6.240894 ACTGAATTCATCTGGCTGTTTTCTA 58.759 36.000 8.96 0.00 0.00 2.10
2812 3177 6.832520 TGTTTCCAAGCAGCATATTTTAGA 57.167 33.333 0.00 0.00 0.00 2.10
2816 3193 5.127519 TGCTATGTTTCCAAGCAGCATATTT 59.872 36.000 0.00 0.00 41.15 1.40
2817 3194 4.646040 TGCTATGTTTCCAAGCAGCATATT 59.354 37.500 0.00 0.00 41.15 1.28
2863 3299 3.308438 AGTTTTGCTGAATCACATGCC 57.692 42.857 0.00 0.00 0.00 4.40
2887 3323 2.352715 GCCAAAAGCACATCCCAGTTAC 60.353 50.000 0.00 0.00 42.97 2.50
2900 3336 1.066929 CCAGGTATTGGTGCCAAAAGC 60.067 52.381 7.81 1.71 42.41 3.51
2949 3386 0.040425 AACAGGTGTCGAAATTGCGC 60.040 50.000 0.00 0.00 0.00 6.09
2970 3407 4.202264 ACCAGGAGTGAGTGTAAGTTCTTG 60.202 45.833 0.00 0.00 0.00 3.02
2985 3422 0.249398 GGTATTGCACGACCAGGAGT 59.751 55.000 10.72 0.00 35.65 3.85
3021 3466 5.417580 GTCACAGCCACCCTGATAAAAATAA 59.582 40.000 0.00 0.00 44.64 1.40
3023 3468 3.763897 GTCACAGCCACCCTGATAAAAAT 59.236 43.478 0.00 0.00 44.64 1.82
3030 3475 2.099652 CTTCGTCACAGCCACCCTGA 62.100 60.000 0.00 0.00 44.64 3.86
3111 3557 2.983592 CGCAGGCCCGTTTCCTTT 60.984 61.111 0.00 0.00 0.00 3.11
3204 3650 0.396417 ACAGAGCTATGGCCGAGAGT 60.396 55.000 13.85 0.00 39.73 3.24
3291 3746 2.656947 ACACACACTATGCCCTGTTT 57.343 45.000 0.00 0.00 0.00 2.83
3295 3750 2.639839 AGAAGAACACACACTATGCCCT 59.360 45.455 0.00 0.00 0.00 5.19
3321 3776 7.766278 ACTTGATCACCAATGTTCTACATCTAC 59.234 37.037 0.00 0.00 37.97 2.59
3322 3777 7.765819 CACTTGATCACCAATGTTCTACATCTA 59.234 37.037 0.00 0.00 37.97 1.98
3363 3821 2.117156 CCTTTCAGGCGGGCATGAG 61.117 63.158 8.09 0.00 38.02 2.90
3396 3854 3.378112 GCAACAAGCATGGTCTAGCATTA 59.622 43.478 0.00 0.00 44.79 1.90
3468 4245 2.757868 GTGCATCTACTCAGACTGACCT 59.242 50.000 0.00 0.00 32.25 3.85
3469 4246 2.159170 GGTGCATCTACTCAGACTGACC 60.159 54.545 0.00 0.00 32.25 4.02
3470 4247 2.757868 AGGTGCATCTACTCAGACTGAC 59.242 50.000 0.00 0.00 32.25 3.51
3483 4260 9.807649 AAAGAAAATATTGAACATAGGTGCATC 57.192 29.630 0.00 0.00 30.89 3.91
3515 4294 5.473931 TCGCCTGCAATGCTTAATTTTTAA 58.526 33.333 6.82 0.00 0.00 1.52
3521 4300 1.818060 TGTTCGCCTGCAATGCTTAAT 59.182 42.857 6.82 0.00 0.00 1.40
3533 4312 5.508200 TTTGTAAACTGATTTGTTCGCCT 57.492 34.783 0.00 0.00 0.00 5.52
3547 4326 5.173131 CGATTCTGCCACAAGTTTTGTAAAC 59.827 40.000 0.00 0.00 43.23 2.01
3548 4327 5.163602 ACGATTCTGCCACAAGTTTTGTAAA 60.164 36.000 0.00 0.00 43.23 2.01
3549 4328 4.336993 ACGATTCTGCCACAAGTTTTGTAA 59.663 37.500 0.00 0.00 43.23 2.41
3550 4329 3.880490 ACGATTCTGCCACAAGTTTTGTA 59.120 39.130 0.00 0.00 43.23 2.41
3551 4330 2.687935 ACGATTCTGCCACAAGTTTTGT 59.312 40.909 0.00 0.00 46.75 2.83
3552 4331 3.243035 TGACGATTCTGCCACAAGTTTTG 60.243 43.478 0.00 0.00 0.00 2.44
3553 4332 2.948979 TGACGATTCTGCCACAAGTTTT 59.051 40.909 0.00 0.00 0.00 2.43
3554 4333 2.571212 TGACGATTCTGCCACAAGTTT 58.429 42.857 0.00 0.00 0.00 2.66
3555 4334 2.254546 TGACGATTCTGCCACAAGTT 57.745 45.000 0.00 0.00 0.00 2.66
3556 4335 2.479566 ATGACGATTCTGCCACAAGT 57.520 45.000 0.00 0.00 0.00 3.16
3557 4336 5.295292 AGAATTATGACGATTCTGCCACAAG 59.705 40.000 0.00 0.00 41.13 3.16
3558 4337 5.185454 AGAATTATGACGATTCTGCCACAA 58.815 37.500 0.00 0.00 41.13 3.33
3559 4338 4.769688 AGAATTATGACGATTCTGCCACA 58.230 39.130 0.00 0.00 41.13 4.17
3560 4339 6.216750 GTAGAATTATGACGATTCTGCCAC 57.783 41.667 9.05 0.00 42.27 5.01
3565 4344 7.822334 TGTTTGTGGTAGAATTATGACGATTCT 59.178 33.333 4.92 4.92 43.99 2.40
3571 4366 9.378551 TCATAGTGTTTGTGGTAGAATTATGAC 57.621 33.333 0.00 0.00 0.00 3.06
3648 4507 3.622163 CAGCAAGTCACTGGATCTCAATC 59.378 47.826 0.00 0.00 0.00 2.67
3649 4508 3.008813 ACAGCAAGTCACTGGATCTCAAT 59.991 43.478 0.00 0.00 39.55 2.57
3650 4509 2.369860 ACAGCAAGTCACTGGATCTCAA 59.630 45.455 0.00 0.00 39.55 3.02
3651 4510 1.973515 ACAGCAAGTCACTGGATCTCA 59.026 47.619 0.00 0.00 39.55 3.27
3652 4511 2.028658 TCACAGCAAGTCACTGGATCTC 60.029 50.000 0.00 0.00 39.55 2.75
3653 4512 1.973515 TCACAGCAAGTCACTGGATCT 59.026 47.619 0.00 0.00 39.55 2.75
3654 4513 2.344950 CTCACAGCAAGTCACTGGATC 58.655 52.381 0.00 0.00 39.55 3.36
3655 4514 1.610102 GCTCACAGCAAGTCACTGGAT 60.610 52.381 0.00 0.00 41.89 3.41
3656 4515 0.250038 GCTCACAGCAAGTCACTGGA 60.250 55.000 0.00 0.00 41.89 3.86
3657 4516 2.242113 GCTCACAGCAAGTCACTGG 58.758 57.895 0.00 0.00 41.89 4.00
3671 4530 0.531974 GTTCACCGGTGACTTGCTCA 60.532 55.000 36.40 17.78 39.66 4.26
3672 4531 0.531974 TGTTCACCGGTGACTTGCTC 60.532 55.000 36.40 20.59 39.66 4.26
3673 4532 0.532862 CTGTTCACCGGTGACTTGCT 60.533 55.000 36.40 0.00 39.66 3.91
3674 4533 0.814010 ACTGTTCACCGGTGACTTGC 60.814 55.000 36.40 24.48 39.66 4.01
3675 4534 2.132762 GTACTGTTCACCGGTGACTTG 58.867 52.381 36.40 27.39 39.66 3.16
3676 4535 1.269413 CGTACTGTTCACCGGTGACTT 60.269 52.381 36.40 21.59 39.66 3.01
3677 4536 0.313043 CGTACTGTTCACCGGTGACT 59.687 55.000 36.40 20.32 39.66 3.41
3678 4537 0.665369 CCGTACTGTTCACCGGTGAC 60.665 60.000 36.40 28.20 39.66 3.67
3679 4538 1.661480 CCGTACTGTTCACCGGTGA 59.339 57.895 33.23 33.23 37.91 4.02
3680 4539 2.025418 GCCGTACTGTTCACCGGTG 61.025 63.158 29.26 29.26 42.36 4.94
3681 4540 2.341176 GCCGTACTGTTCACCGGT 59.659 61.111 0.00 0.00 42.36 5.28
3682 4541 2.807895 CGCCGTACTGTTCACCGG 60.808 66.667 0.00 0.00 43.22 5.28
3683 4542 2.084681 GTCGCCGTACTGTTCACCG 61.085 63.158 0.00 0.00 0.00 4.94
3684 4543 1.007336 CAGTCGCCGTACTGTTCACC 61.007 60.000 8.05 0.00 41.63 4.02
3685 4544 1.007336 CCAGTCGCCGTACTGTTCAC 61.007 60.000 13.10 0.00 44.45 3.18
3686 4545 1.287815 CCAGTCGCCGTACTGTTCA 59.712 57.895 13.10 0.00 44.45 3.18
3687 4546 2.092882 GCCAGTCGCCGTACTGTTC 61.093 63.158 13.10 4.29 44.45 3.18
3688 4547 2.048503 GCCAGTCGCCGTACTGTT 60.049 61.111 13.10 0.00 44.45 3.16
3689 4548 2.989824 AGCCAGTCGCCGTACTGT 60.990 61.111 13.10 0.00 44.45 3.55
3690 4549 2.202623 GAGCCAGTCGCCGTACTG 60.203 66.667 8.95 8.95 45.33 2.74
3691 4550 2.361357 AGAGCCAGTCGCCGTACT 60.361 61.111 0.00 0.00 38.78 2.73
3692 4551 2.102553 GAGAGCCAGTCGCCGTAC 59.897 66.667 0.00 0.00 38.78 3.67
3693 4552 3.138798 GGAGAGCCAGTCGCCGTA 61.139 66.667 0.00 0.00 35.14 4.02
3696 4555 1.448717 GAAAGGAGAGCCAGTCGCC 60.449 63.158 0.00 0.00 45.37 5.54
3697 4556 1.448717 GGAAAGGAGAGCCAGTCGC 60.449 63.158 0.00 0.00 36.29 5.19
3698 4557 1.219393 GGGAAAGGAGAGCCAGTCG 59.781 63.158 0.00 0.00 36.29 4.18
3699 4558 1.201429 TGGGGAAAGGAGAGCCAGTC 61.201 60.000 0.00 0.00 36.29 3.51
3700 4559 1.151810 TGGGGAAAGGAGAGCCAGT 60.152 57.895 0.00 0.00 36.29 4.00
3701 4560 1.301293 GTGGGGAAAGGAGAGCCAG 59.699 63.158 0.00 0.00 36.29 4.85
3702 4561 2.231380 GGTGGGGAAAGGAGAGCCA 61.231 63.158 0.00 0.00 36.29 4.75
3703 4562 1.575447 ATGGTGGGGAAAGGAGAGCC 61.575 60.000 0.00 0.00 0.00 4.70
3704 4563 0.106967 GATGGTGGGGAAAGGAGAGC 60.107 60.000 0.00 0.00 0.00 4.09
3705 4564 0.179000 CGATGGTGGGGAAAGGAGAG 59.821 60.000 0.00 0.00 0.00 3.20
3706 4565 1.271840 CCGATGGTGGGGAAAGGAGA 61.272 60.000 0.00 0.00 0.00 3.71
3707 4566 1.224592 CCGATGGTGGGGAAAGGAG 59.775 63.158 0.00 0.00 0.00 3.69
3708 4567 0.623324 ATCCGATGGTGGGGAAAGGA 60.623 55.000 0.00 0.00 35.60 3.36
3709 4568 0.179018 GATCCGATGGTGGGGAAAGG 60.179 60.000 0.00 0.00 35.60 3.11
3710 4569 0.532862 CGATCCGATGGTGGGGAAAG 60.533 60.000 0.00 0.00 35.60 2.62
3711 4570 0.978667 TCGATCCGATGGTGGGGAAA 60.979 55.000 0.00 0.00 35.60 3.13
3712 4571 1.382009 TCGATCCGATGGTGGGGAA 60.382 57.895 0.00 0.00 35.60 3.97
3713 4572 1.832608 CTCGATCCGATGGTGGGGA 60.833 63.158 0.00 0.00 34.61 4.81
3714 4573 2.737180 CTCGATCCGATGGTGGGG 59.263 66.667 0.00 0.00 34.61 4.96
3715 4574 2.737180 CCTCGATCCGATGGTGGG 59.263 66.667 4.09 0.00 34.61 4.61
3716 4575 2.737180 CCCTCGATCCGATGGTGG 59.263 66.667 4.88 4.88 37.01 4.61
3719 4578 0.249489 GTTGACCCTCGATCCGATGG 60.249 60.000 8.71 8.71 44.85 3.51
3720 4579 0.595053 CGTTGACCCTCGATCCGATG 60.595 60.000 0.00 0.00 34.61 3.84
3721 4580 1.734137 CGTTGACCCTCGATCCGAT 59.266 57.895 0.00 0.00 34.61 4.18
3722 4581 2.412323 CCGTTGACCCTCGATCCGA 61.412 63.158 0.00 0.00 0.00 4.55
3723 4582 2.104331 CCGTTGACCCTCGATCCG 59.896 66.667 0.00 0.00 0.00 4.18
3724 4583 1.141234 GTCCGTTGACCCTCGATCC 59.859 63.158 0.00 0.00 35.34 3.36
3725 4584 0.460311 ATGTCCGTTGACCCTCGATC 59.540 55.000 0.00 0.00 41.01 3.69
3726 4585 1.771565 TATGTCCGTTGACCCTCGAT 58.228 50.000 0.00 0.00 41.01 3.59
3727 4586 1.679680 GATATGTCCGTTGACCCTCGA 59.320 52.381 0.00 0.00 41.01 4.04
3728 4587 1.269621 GGATATGTCCGTTGACCCTCG 60.270 57.143 0.00 0.00 41.01 4.63
3729 4588 2.528041 GGATATGTCCGTTGACCCTC 57.472 55.000 0.00 0.00 41.01 4.30
3739 4598 1.209128 CTGTTCACGCGGATATGTCC 58.791 55.000 12.47 0.00 41.40 4.02
3740 4599 1.922570 ACTGTTCACGCGGATATGTC 58.077 50.000 12.47 0.00 0.00 3.06
3741 4600 2.480759 GGTACTGTTCACGCGGATATGT 60.481 50.000 12.47 4.58 0.00 2.29
3742 4601 2.124903 GGTACTGTTCACGCGGATATG 58.875 52.381 12.47 0.00 0.00 1.78
3743 4602 1.068127 GGGTACTGTTCACGCGGATAT 59.932 52.381 12.47 0.00 0.00 1.63
3744 4603 0.457035 GGGTACTGTTCACGCGGATA 59.543 55.000 12.47 0.00 0.00 2.59
3745 4604 1.217244 GGGTACTGTTCACGCGGAT 59.783 57.895 12.47 0.00 0.00 4.18
3746 4605 1.904865 AGGGTACTGTTCACGCGGA 60.905 57.895 12.47 1.33 34.30 5.54
3747 4606 1.736645 CAGGGTACTGTTCACGCGG 60.737 63.158 12.47 0.00 39.92 6.46
3748 4607 0.732880 CTCAGGGTACTGTTCACGCG 60.733 60.000 3.53 3.53 45.14 6.01
3749 4608 1.014564 GCTCAGGGTACTGTTCACGC 61.015 60.000 0.00 0.00 45.14 5.34
3750 4609 0.603569 AGCTCAGGGTACTGTTCACG 59.396 55.000 0.00 0.00 45.14 4.35
3751 4610 2.561419 TGTAGCTCAGGGTACTGTTCAC 59.439 50.000 0.00 0.00 45.14 3.18
3752 4611 2.826128 CTGTAGCTCAGGGTACTGTTCA 59.174 50.000 0.00 0.00 45.14 3.18
3753 4612 3.512033 CTGTAGCTCAGGGTACTGTTC 57.488 52.381 0.00 0.00 45.14 3.18
3764 4623 1.342074 AGACAAGGCACTGTAGCTCA 58.658 50.000 0.00 0.00 40.86 4.26
3765 4624 2.231478 TGTAGACAAGGCACTGTAGCTC 59.769 50.000 0.00 0.00 40.86 4.09
3766 4625 2.248248 TGTAGACAAGGCACTGTAGCT 58.752 47.619 0.00 0.00 40.86 3.32
3767 4626 2.743636 TGTAGACAAGGCACTGTAGC 57.256 50.000 0.00 0.00 40.86 3.58
3768 4627 6.208988 TCTTATGTAGACAAGGCACTGTAG 57.791 41.667 0.00 0.00 40.86 2.74
3769 4628 6.791867 ATCTTATGTAGACAAGGCACTGTA 57.208 37.500 0.00 0.00 34.93 2.74
3770 4629 5.683876 ATCTTATGTAGACAAGGCACTGT 57.316 39.130 0.00 0.00 34.93 3.55
3771 4630 5.220739 GCAATCTTATGTAGACAAGGCACTG 60.221 44.000 0.00 0.00 34.93 3.66
3772 4631 4.878397 GCAATCTTATGTAGACAAGGCACT 59.122 41.667 0.00 0.00 36.12 4.40
3773 4632 4.035675 GGCAATCTTATGTAGACAAGGCAC 59.964 45.833 0.00 0.00 35.19 5.01
3774 4633 4.199310 GGCAATCTTATGTAGACAAGGCA 58.801 43.478 0.00 0.00 35.19 4.75
3775 4634 3.565902 GGGCAATCTTATGTAGACAAGGC 59.434 47.826 0.00 0.00 35.19 4.35
3776 4635 4.576463 GTGGGCAATCTTATGTAGACAAGG 59.424 45.833 0.00 0.00 35.19 3.61
3777 4636 5.185454 TGTGGGCAATCTTATGTAGACAAG 58.815 41.667 0.00 0.00 35.19 3.16
3778 4637 5.172687 TGTGGGCAATCTTATGTAGACAA 57.827 39.130 0.00 0.00 35.19 3.18
3779 4638 4.225042 ACTGTGGGCAATCTTATGTAGACA 59.775 41.667 0.00 0.00 35.19 3.41
3780 4639 4.770795 ACTGTGGGCAATCTTATGTAGAC 58.229 43.478 0.00 0.00 35.19 2.59
3781 4640 5.163343 GGTACTGTGGGCAATCTTATGTAGA 60.163 44.000 0.00 0.00 37.28 2.59
3782 4641 5.057149 GGTACTGTGGGCAATCTTATGTAG 58.943 45.833 0.00 0.00 0.00 2.74
3783 4642 4.141574 GGGTACTGTGGGCAATCTTATGTA 60.142 45.833 0.00 0.00 0.00 2.29
3784 4643 3.371595 GGGTACTGTGGGCAATCTTATGT 60.372 47.826 0.00 0.00 0.00 2.29
3785 4644 3.214328 GGGTACTGTGGGCAATCTTATG 58.786 50.000 0.00 0.00 0.00 1.90
3786 4645 2.174854 GGGGTACTGTGGGCAATCTTAT 59.825 50.000 0.00 0.00 0.00 1.73
3787 4646 1.562475 GGGGTACTGTGGGCAATCTTA 59.438 52.381 0.00 0.00 0.00 2.10
3788 4647 0.331616 GGGGTACTGTGGGCAATCTT 59.668 55.000 0.00 0.00 0.00 2.40
3789 4648 1.910580 CGGGGTACTGTGGGCAATCT 61.911 60.000 0.00 0.00 0.00 2.40
3790 4649 1.451387 CGGGGTACTGTGGGCAATC 60.451 63.158 0.00 0.00 0.00 2.67
3791 4650 2.674754 CGGGGTACTGTGGGCAAT 59.325 61.111 0.00 0.00 0.00 3.56
3792 4651 3.642503 CCGGGGTACTGTGGGCAA 61.643 66.667 0.00 0.00 0.00 4.52
3793 4652 4.966274 ACCGGGGTACTGTGGGCA 62.966 66.667 6.32 0.00 0.00 5.36
3794 4653 4.091939 GACCGGGGTACTGTGGGC 62.092 72.222 6.32 0.00 0.00 5.36
3795 4654 1.000739 TAGACCGGGGTACTGTGGG 59.999 63.158 6.32 0.00 0.00 4.61
3796 4655 0.612732 TGTAGACCGGGGTACTGTGG 60.613 60.000 6.32 0.00 0.00 4.17
3797 4656 0.815734 CTGTAGACCGGGGTACTGTG 59.184 60.000 6.32 0.00 0.00 3.66
3798 4657 0.407139 ACTGTAGACCGGGGTACTGT 59.593 55.000 17.13 17.13 0.00 3.55
3799 4658 0.815734 CACTGTAGACCGGGGTACTG 59.184 60.000 6.32 12.98 0.00 2.74
3800 4659 0.407139 ACACTGTAGACCGGGGTACT 59.593 55.000 6.32 1.95 32.95 2.73
3801 4660 0.813821 GACACTGTAGACCGGGGTAC 59.186 60.000 6.32 7.51 35.71 3.34
3802 4661 0.405198 TGACACTGTAGACCGGGGTA 59.595 55.000 6.32 0.00 35.71 3.69
3803 4662 0.898789 CTGACACTGTAGACCGGGGT 60.899 60.000 6.32 0.00 39.40 4.95
3804 4663 1.890894 CTGACACTGTAGACCGGGG 59.109 63.158 6.32 0.00 0.00 5.73
3805 4664 1.215647 GCTGACACTGTAGACCGGG 59.784 63.158 6.32 0.00 0.00 5.73
3806 4665 1.132643 GTAGCTGACACTGTAGACCGG 59.867 57.143 0.00 0.00 0.00 5.28
3807 4666 1.810755 TGTAGCTGACACTGTAGACCG 59.189 52.381 0.00 0.00 31.20 4.79
3808 4667 2.820787 ACTGTAGCTGACACTGTAGACC 59.179 50.000 0.00 0.00 33.31 3.85
3809 4668 3.253677 ACACTGTAGCTGACACTGTAGAC 59.746 47.826 0.00 0.00 34.46 2.59
3810 4669 3.487372 ACACTGTAGCTGACACTGTAGA 58.513 45.455 0.00 0.00 34.46 2.59
3811 4670 3.924918 ACACTGTAGCTGACACTGTAG 57.075 47.619 0.00 0.00 34.46 2.74
3812 4671 4.098807 TGAAACACTGTAGCTGACACTGTA 59.901 41.667 0.00 0.00 34.96 2.74
3813 4672 3.118775 TGAAACACTGTAGCTGACACTGT 60.119 43.478 0.00 0.00 36.86 3.55
3814 4673 3.457234 TGAAACACTGTAGCTGACACTG 58.543 45.455 0.00 0.00 33.31 3.66
3815 4674 3.819564 TGAAACACTGTAGCTGACACT 57.180 42.857 0.00 0.00 33.31 3.55
3816 4675 3.364366 GCATGAAACACTGTAGCTGACAC 60.364 47.826 0.00 0.00 33.31 3.67
3817 4676 2.807967 GCATGAAACACTGTAGCTGACA 59.192 45.455 0.00 0.00 36.35 3.58
3818 4677 3.070018 AGCATGAAACACTGTAGCTGAC 58.930 45.455 0.00 0.00 0.00 3.51
3819 4678 3.407424 AGCATGAAACACTGTAGCTGA 57.593 42.857 0.00 0.00 0.00 4.26
3820 4679 3.466712 CAGCATGAAACACTGTAGCTG 57.533 47.619 0.00 0.00 39.69 4.24
3821 4680 1.808945 GCAGCATGAAACACTGTAGCT 59.191 47.619 0.00 0.00 39.69 3.32
3822 4681 1.536766 TGCAGCATGAAACACTGTAGC 59.463 47.619 0.00 0.00 39.69 3.58
3823 4682 3.437741 TGATGCAGCATGAAACACTGTAG 59.562 43.478 14.22 0.00 39.69 2.74
3824 4683 3.189080 GTGATGCAGCATGAAACACTGTA 59.811 43.478 14.22 0.00 39.69 2.74
3825 4684 2.030540 GTGATGCAGCATGAAACACTGT 60.031 45.455 14.22 0.00 39.69 3.55
3826 4685 2.228103 AGTGATGCAGCATGAAACACTG 59.772 45.455 21.05 0.00 40.35 3.66
3827 4686 2.486982 GAGTGATGCAGCATGAAACACT 59.513 45.455 21.60 21.60 42.78 3.55
3828 4687 2.227149 TGAGTGATGCAGCATGAAACAC 59.773 45.455 14.22 14.31 39.69 3.32
3829 4688 2.506444 TGAGTGATGCAGCATGAAACA 58.494 42.857 14.22 5.38 39.69 2.83
3830 4689 3.564235 TTGAGTGATGCAGCATGAAAC 57.436 42.857 14.22 8.42 39.69 2.78
3831 4690 4.014406 AGATTGAGTGATGCAGCATGAAA 58.986 39.130 14.22 3.10 39.69 2.69
3832 4691 3.377172 CAGATTGAGTGATGCAGCATGAA 59.623 43.478 14.22 1.50 39.69 2.57
3833 4692 2.943033 CAGATTGAGTGATGCAGCATGA 59.057 45.455 14.22 0.00 39.69 3.07
3834 4693 2.943033 TCAGATTGAGTGATGCAGCATG 59.057 45.455 14.22 0.00 40.87 4.06
3835 4694 3.206964 CTCAGATTGAGTGATGCAGCAT 58.793 45.455 8.41 7.91 39.58 3.79
3836 4695 2.629051 CTCAGATTGAGTGATGCAGCA 58.371 47.619 0.00 0.00 39.58 4.41
3837 4696 1.331138 GCTCAGATTGAGTGATGCAGC 59.669 52.381 0.00 0.00 45.94 5.25
3838 4697 1.941294 GGCTCAGATTGAGTGATGCAG 59.059 52.381 7.80 0.00 45.94 4.41
3839 4698 1.407851 GGGCTCAGATTGAGTGATGCA 60.408 52.381 7.80 0.00 45.94 3.96
3840 4699 1.307097 GGGCTCAGATTGAGTGATGC 58.693 55.000 7.80 0.00 45.94 3.91
3841 4700 1.476471 GGGGGCTCAGATTGAGTGATG 60.476 57.143 7.80 0.00 45.94 3.07
3842 4701 0.842635 GGGGGCTCAGATTGAGTGAT 59.157 55.000 7.80 0.00 45.94 3.06
3843 4702 2.300996 GGGGGCTCAGATTGAGTGA 58.699 57.895 7.80 0.00 45.94 3.41
3844 4703 4.972875 GGGGGCTCAGATTGAGTG 57.027 61.111 7.80 0.00 45.94 3.51
3859 4718 1.152963 CAGCCGTTGGATTAGGGGG 60.153 63.158 0.00 0.00 0.00 5.40
3860 4719 1.823899 GCAGCCGTTGGATTAGGGG 60.824 63.158 0.00 0.00 0.00 4.79
3861 4720 1.823899 GGCAGCCGTTGGATTAGGG 60.824 63.158 0.00 0.00 0.00 3.53
3862 4721 1.077787 TGGCAGCCGTTGGATTAGG 60.078 57.895 7.03 0.00 0.00 2.69
3863 4722 1.718757 GCTGGCAGCCGTTGGATTAG 61.719 60.000 28.87 0.00 34.48 1.73
3864 4723 1.748879 GCTGGCAGCCGTTGGATTA 60.749 57.895 28.87 0.00 34.48 1.75
3865 4724 3.064324 GCTGGCAGCCGTTGGATT 61.064 61.111 28.87 0.00 34.48 3.01
3874 4733 1.682005 TAATTGGTGGGCTGGCAGC 60.682 57.895 30.93 30.93 41.46 5.25
3875 4734 1.656818 CGTAATTGGTGGGCTGGCAG 61.657 60.000 10.94 10.94 0.00 4.85
3876 4735 1.677300 CGTAATTGGTGGGCTGGCA 60.677 57.895 2.88 0.00 0.00 4.92
3877 4736 3.063743 GCGTAATTGGTGGGCTGGC 62.064 63.158 0.00 0.00 0.00 4.85
3878 4737 2.414785 GGCGTAATTGGTGGGCTGG 61.415 63.158 0.00 0.00 0.00 4.85
3879 4738 2.760159 CGGCGTAATTGGTGGGCTG 61.760 63.158 0.00 0.00 0.00 4.85
3880 4739 2.437716 CGGCGTAATTGGTGGGCT 60.438 61.111 0.00 0.00 0.00 5.19
3881 4740 2.748647 ACGGCGTAATTGGTGGGC 60.749 61.111 12.58 0.00 0.00 5.36
3882 4741 3.046497 GCACGGCGTAATTGGTGGG 62.046 63.158 14.22 0.00 0.00 4.61
3883 4742 2.483288 GCACGGCGTAATTGGTGG 59.517 61.111 14.22 0.00 0.00 4.61
3884 4743 1.582610 AAGGCACGGCGTAATTGGTG 61.583 55.000 14.22 0.00 0.00 4.17
3885 4744 1.302993 AAGGCACGGCGTAATTGGT 60.303 52.632 14.22 0.00 0.00 3.67
3886 4745 1.136565 CAAGGCACGGCGTAATTGG 59.863 57.895 14.22 0.00 0.00 3.16
3887 4746 1.514014 GCAAGGCACGGCGTAATTG 60.514 57.895 14.22 18.20 0.00 2.32
3888 4747 1.674322 AGCAAGGCACGGCGTAATT 60.674 52.632 14.22 4.83 38.48 1.40
3889 4748 2.046314 AGCAAGGCACGGCGTAAT 60.046 55.556 14.22 0.00 38.48 1.89
3890 4749 3.047280 CAGCAAGGCACGGCGTAA 61.047 61.111 14.22 0.00 38.48 3.18
3891 4750 4.308458 ACAGCAAGGCACGGCGTA 62.308 61.111 14.22 0.00 38.48 4.42
3911 4770 1.099879 ATTGAGATCCAGCGCCTTGC 61.100 55.000 2.29 0.00 46.98 4.01
3912 4771 0.942962 GATTGAGATCCAGCGCCTTG 59.057 55.000 2.29 0.00 0.00 3.61
3913 4772 0.543277 TGATTGAGATCCAGCGCCTT 59.457 50.000 2.29 0.00 0.00 4.35
3914 4773 0.763652 ATGATTGAGATCCAGCGCCT 59.236 50.000 2.29 0.00 0.00 5.52
3915 4774 0.873054 CATGATTGAGATCCAGCGCC 59.127 55.000 2.29 0.00 0.00 6.53
3916 4775 1.875009 TCATGATTGAGATCCAGCGC 58.125 50.000 0.00 0.00 0.00 5.92
3917 4776 3.725490 TCTTCATGATTGAGATCCAGCG 58.275 45.455 0.00 0.00 32.27 5.18
3918 4777 5.505985 GCTTTCTTCATGATTGAGATCCAGC 60.506 44.000 0.00 1.94 32.27 4.85
3919 4778 5.589050 TGCTTTCTTCATGATTGAGATCCAG 59.411 40.000 0.00 0.00 32.27 3.86
3920 4779 5.503002 TGCTTTCTTCATGATTGAGATCCA 58.497 37.500 0.00 0.00 32.27 3.41
3921 4780 6.636562 ATGCTTTCTTCATGATTGAGATCC 57.363 37.500 0.00 0.00 32.27 3.36
3922 4781 6.418226 GCAATGCTTTCTTCATGATTGAGATC 59.582 38.462 0.00 0.00 32.27 2.75
3923 4782 6.127451 TGCAATGCTTTCTTCATGATTGAGAT 60.127 34.615 6.82 0.00 32.27 2.75
3924 4783 5.184287 TGCAATGCTTTCTTCATGATTGAGA 59.816 36.000 6.82 0.00 32.27 3.27
3925 4784 5.288712 GTGCAATGCTTTCTTCATGATTGAG 59.711 40.000 6.82 0.00 32.27 3.02
3926 4785 5.165676 GTGCAATGCTTTCTTCATGATTGA 58.834 37.500 6.82 0.00 0.00 2.57
3927 4786 4.031314 CGTGCAATGCTTTCTTCATGATTG 59.969 41.667 6.82 0.00 0.00 2.67
3928 4787 4.171005 CGTGCAATGCTTTCTTCATGATT 58.829 39.130 6.82 0.00 0.00 2.57
3929 4788 3.192001 ACGTGCAATGCTTTCTTCATGAT 59.808 39.130 6.82 0.00 0.00 2.45
3930 4789 2.553602 ACGTGCAATGCTTTCTTCATGA 59.446 40.909 6.82 0.00 0.00 3.07
3931 4790 2.659757 CACGTGCAATGCTTTCTTCATG 59.340 45.455 6.82 0.00 0.00 3.07
3932 4791 2.294233 ACACGTGCAATGCTTTCTTCAT 59.706 40.909 17.22 0.00 0.00 2.57
3933 4792 1.675483 ACACGTGCAATGCTTTCTTCA 59.325 42.857 17.22 0.00 0.00 3.02
3934 4793 2.046313 CACACGTGCAATGCTTTCTTC 58.954 47.619 17.22 0.00 0.00 2.87
4002 4861 3.491652 GTTGGCTCGAAGCTCCGC 61.492 66.667 0.00 0.00 41.99 5.54
4056 4926 5.625886 CGATAGGTGGTTAGTCAATGGTTGA 60.626 44.000 0.00 0.00 37.33 3.18
4112 4982 5.932303 CACTTTTCTCTCGGTTTGGATAAGA 59.068 40.000 0.00 0.00 0.00 2.10
4114 4984 5.468746 CACACTTTTCTCTCGGTTTGGATAA 59.531 40.000 0.00 0.00 0.00 1.75
4115 4985 4.994852 CACACTTTTCTCTCGGTTTGGATA 59.005 41.667 0.00 0.00 0.00 2.59
4118 4988 3.202906 TCACACTTTTCTCTCGGTTTGG 58.797 45.455 0.00 0.00 0.00 3.28
4129 4999 4.400529 AACCACCCAAATCACACTTTTC 57.599 40.909 0.00 0.00 0.00 2.29
4169 5039 8.523658 CAGGTACTCCGATCAATAGATGAATTA 58.476 37.037 0.00 0.00 38.15 1.40
4172 5042 5.833667 ACAGGTACTCCGATCAATAGATGAA 59.166 40.000 0.00 0.00 38.15 2.57
4185 5055 3.604875 ACATTACCAACAGGTACTCCG 57.395 47.619 0.00 0.00 37.62 4.63
4214 5086 1.948104 TTCAAGTGGACACCTTCACG 58.052 50.000 0.00 0.00 38.77 4.35
4304 5181 2.079158 ACATGTGTCATTTGAGGAGCG 58.921 47.619 0.00 0.00 0.00 5.03
4331 5208 8.682936 AAAATAGTAGCATCAACAGGATTAGG 57.317 34.615 0.00 0.00 32.57 2.69
4443 5320 5.585390 CATACAAAAGCCAAGGATGACATC 58.415 41.667 6.91 6.91 0.00 3.06


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.