AutoCloner

Multiple sequence alignment - TraesCS4A01G423400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)

BLAST Results

Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

	qseqid	sseqid	percentage.identical	alignment.length	no.mismatch	no.gap.openings	qstart	qend	sstart	send	evalue	bitscore
0	TraesCS4A01G423400	chr4A	100.000	3158	0	0	1	3158	693492553	693489396	0.000000e+00	5832.0
1	TraesCS4A01G423400	chr4A	78.677	2223	333	81	1012	3158	693452148	693449991	0.000000e+00	1349.0
2	TraesCS4A01G423400	chr4A	81.850	1416	201	37	1012	2399	693445281	693443894	0.000000e+00	1140.0
3	TraesCS4A01G423400	chr4A	84.867	1163	121	31	1017	2134	693433339	693432187	0.000000e+00	1122.0
4	TraesCS4A01G423400	chr4A	75.457	1259	200	49	1898	3102	693284069	693282866	2.170000e-141	512.0
5	TraesCS4A01G423400	chr4A	93.023	43	2	1	3109	3151	693431872	693431831	9.460000e-06	62.1
6	TraesCS4A01G423400	chr7D	93.417	2142	103	15	1012	3136	33105808	33103688	0.000000e+00	3140.0
7	TraesCS4A01G423400	chr7D	80.000	1315	190	52	992	2272	33089092	33087817	0.000000e+00	904.0
8	TraesCS4A01G423400	chr7D	76.471	1445	237	52	1722	3102	33056496	33055091	0.000000e+00	689.0
9	TraesCS4A01G423400	chr7D	81.579	646	77	16	1872	2500	33095712	33095092	2.190000e-136	496.0
10	TraesCS4A01G423400	chr7D	78.737	475	55	19	356	813	33096198	33095753	3.100000e-70	276.0
11	TraesCS4A01G423400	chr7D	89.423	104	10	1	2385	2487	33087758	33087655	2.560000e-26	130.0
12	TraesCS4A01G423400	chr7D	84.466	103	6	4	3050	3151	33094913	33094820	3.350000e-15	93.5
13	TraesCS4A01G423400	chr7D	97.826	46	1	0	3113	3158	33103663	33103618	2.610000e-11	80.5
14	TraesCS4A01G423400	chr7D	94.000	50	3	0	75	124	33148094	33148045	3.380000e-10	76.8
15	TraesCS4A01G423400	chr7A	93.969	1426	60	12	1726	3136	33455056	33453642	0.000000e+00	2134.0
16	TraesCS4A01G423400	chr7A	81.142	1453	202	44	1061	2487	33374082	33372676	0.000000e+00	1099.0
17	TraesCS4A01G423400	chr7A	81.377	1380	211	26	1021	2375	33426219	33424861	0.000000e+00	1083.0
18	TraesCS4A01G423400	chr7A	85.182	1073	135	15	1025	2092	33419785	33418732	0.000000e+00	1079.0
19	TraesCS4A01G423400	chr7A	93.642	346	22	0	1012	1357	33455397	33455052	4.670000e-143	518.0
20	TraesCS4A01G423400	chr7A	79.141	326	56	8	1005	1324	733781075	733781394	6.860000e-52	215.0
21	TraesCS4A01G423400	chr7A	100.000	46	0	0	3113	3158	33453617	33453572	5.610000e-13	86.1
22	TraesCS4A01G423400	chr7A	96.000	50	2	0	75	124	33481252	33481203	7.260000e-12	82.4
23	TraesCS4A01G423400	chr5B	96.552	116	4	0	814	929	618772565	618772680	3.210000e-45	193.0
24	TraesCS4A01G423400	chr6D	95.690	116	5	0	814	929	45513924	45514039	1.500000e-43	187.0
25	TraesCS4A01G423400	chr5D	95.690	116	5	0	814	929	503284945	503284830	1.500000e-43	187.0
26	TraesCS4A01G423400	chr5D	94.828	116	5	1	814	929	120797513	120797399	2.500000e-41	180.0
27	TraesCS4A01G423400	chr2A	95.690	116	4	1	814	929	80202694	80202808	5.380000e-43	185.0
28	TraesCS4A01G423400	chr3B	95.690	116	1	4	814	929	101921404	101921515	1.930000e-42	183.0
29	TraesCS4A01G423400	chr4B	94.215	121	2	1	814	929	308690845	308690965	2.500000e-41	180.0
30	TraesCS4A01G423400	chrUn	94.828	116	2	4	814	929	442413790	442413901	9.000000e-41	178.0
31	TraesCS4A01G423400	chr1D	93.966	116	6	1	814	929	51880428	51880542	1.160000e-39	174.0

These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

	query	scaffold	start	end	length	rev.comp	avg.bitscore	max.bitscore	avg.percent.identical	query.start	query.end	num_hsp	groupid	homo_length
0	TraesCS4A01G423400	chr4A	693489396	693492553	3157	True	5832.00	5832	100.000000	1	3158	1	chr4A.!!$R4	3157
1	TraesCS4A01G423400	chr4A	693449991	693452148	2157	True	1349.00	1349	78.677000	1012	3158	1	chr4A.!!$R3	2146
2	TraesCS4A01G423400	chr4A	693443894	693445281	1387	True	1140.00	1140	81.850000	1012	2399	1	chr4A.!!$R2	1387
3	TraesCS4A01G423400	chr4A	693431831	693433339	1508	True	592.05	1122	88.945000	1017	3151	2	chr4A.!!$R5	2134
4	TraesCS4A01G423400	chr4A	693282866	693284069	1203	True	512.00	512	75.457000	1898	3102	1	chr4A.!!$R1	1204
5	TraesCS4A01G423400	chr7D	33103618	33105808	2190	True	1610.25	3140	95.621500	1012	3158	2	chr7D.!!$R5	2146
6	TraesCS4A01G423400	chr7D	33055091	33056496	1405	True	689.00	689	76.471000	1722	3102	1	chr7D.!!$R1	1380
7	TraesCS4A01G423400	chr7D	33087655	33089092	1437	True	517.00	904	84.711500	992	2487	2	chr7D.!!$R3	1495
8	TraesCS4A01G423400	chr7D	33094820	33096198	1378	True	288.50	496	81.594000	356	3151	3	chr7D.!!$R4	2795
9	TraesCS4A01G423400	chr7A	33372676	33374082	1406	True	1099.00	1099	81.142000	1061	2487	1	chr7A.!!$R1	1426
10	TraesCS4A01G423400	chr7A	33424861	33426219	1358	True	1083.00	1083	81.377000	1021	2375	1	chr7A.!!$R3	1354
11	TraesCS4A01G423400	chr7A	33418732	33419785	1053	True	1079.00	1079	85.182000	1025	2092	1	chr7A.!!$R2	1067
12	TraesCS4A01G423400	chr7A	33453572	33455397	1825	True	912.70	2134	95.870333	1012	3158	3	chr7A.!!$R5	2146

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
228	229	0.033504	GTGACCTTGACCTCGAGCAA	59.966	55.0	6.99	6.10	0.00	3.91	F
230	231	0.033504	GACCTTGACCTCGAGCAACA	59.966	55.0	6.99	3.61	0.00	3.33	F
231	232	0.034059	ACCTTGACCTCGAGCAACAG	59.966	55.0	6.99	0.00	0.00	3.16	F
243	244	0.035317	AGCAACAGAGCCAATCGTGA	59.965	50.0	0.00	0.00	34.23	4.35	F

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Hairpin	End Stability	Orientation
1035	1052	0.469144	GGAGGCGGAGGAAGATCTCT	60.469	60.000	0.00	34.39	3.10	R
1635	1684	1.942223	GCGCCCAAACACGTCAAAC	60.942	57.895	0.00	0.00	2.93	R
2070	2179	2.975489	ACCAGTCTGACAGAACCATTCT	59.025	45.455	6.76	41.70	2.40	R
2263	2396	1.698506	TTCAGGGTCGTTTGGCAAAT	58.301	45.000	16.74	0.00	2.32	R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
21	22	4.908601	ATTTCAGTGATGTACCACCAGA	57.091	40.909	0.00	0.00	37.76	3.86
22	23	4.698201	TTTCAGTGATGTACCACCAGAA	57.302	40.909	0.00	0.00	37.76	3.02
23	24	3.961480	TCAGTGATGTACCACCAGAAG	57.039	47.619	0.00	0.00	37.76	2.85
24	25	2.028112	TCAGTGATGTACCACCAGAAGC	60.028	50.000	0.00	0.00	37.76	3.86
25	26	1.977854	AGTGATGTACCACCAGAAGCA	59.022	47.619	0.00	0.00	37.76	3.91
26	27	2.371841	AGTGATGTACCACCAGAAGCAA	59.628	45.455	0.00	0.00	37.76	3.91
27	28	3.146066	GTGATGTACCACCAGAAGCAAA	58.854	45.455	0.00	0.00	0.00	3.68
28	29	3.568007	GTGATGTACCACCAGAAGCAAAA	59.432	43.478	0.00	0.00	0.00	2.44
29	30	4.037446	GTGATGTACCACCAGAAGCAAAAA	59.963	41.667	0.00	0.00	0.00	1.94
30	31	4.037446	TGATGTACCACCAGAAGCAAAAAC	59.963	41.667	0.00	0.00	0.00	2.43
31	32	2.691011	TGTACCACCAGAAGCAAAAACC	59.309	45.455	0.00	0.00	0.00	3.27
32	33	1.119684	ACCACCAGAAGCAAAAACCC	58.880	50.000	0.00	0.00	0.00	4.11
33	34	0.392706	CCACCAGAAGCAAAAACCCC	59.607	55.000	0.00	0.00	0.00	4.95
34	35	1.413118	CACCAGAAGCAAAAACCCCT	58.587	50.000	0.00	0.00	0.00	4.79
35	36	1.762370	CACCAGAAGCAAAAACCCCTT	59.238	47.619	0.00	0.00	0.00	3.95
36	37	2.170397	CACCAGAAGCAAAAACCCCTTT	59.830	45.455	0.00	0.00	0.00	3.11
37	38	3.386402	CACCAGAAGCAAAAACCCCTTTA	59.614	43.478	0.00	0.00	0.00	1.85
38	39	4.040339	CACCAGAAGCAAAAACCCCTTTAT	59.960	41.667	0.00	0.00	0.00	1.40
39	40	4.658435	ACCAGAAGCAAAAACCCCTTTATT	59.342	37.500	0.00	0.00	0.00	1.40
40	41	5.841783	ACCAGAAGCAAAAACCCCTTTATTA	59.158	36.000	0.00	0.00	0.00	0.98
41	42	6.500400	ACCAGAAGCAAAAACCCCTTTATTAT	59.500	34.615	0.00	0.00	0.00	1.28
42	43	7.017155	ACCAGAAGCAAAAACCCCTTTATTATT	59.983	33.333	0.00	0.00	0.00	1.40
43	44	7.334171	CCAGAAGCAAAAACCCCTTTATTATTG	59.666	37.037	0.00	0.00	0.00	1.90
44	45	7.334171	CAGAAGCAAAAACCCCTTTATTATTGG	59.666	37.037	0.00	0.00	0.00	3.16
45	46	6.061022	AGCAAAAACCCCTTTATTATTGGG	57.939	37.500	0.00	0.00	44.03	4.12
79	80	9.860650	ATATATTATTAAGTTGTGGTCTTGCCA	57.139	29.630	0.00	0.00	46.95	4.92
86	87	4.223800	TGGTCTTGCCATCATCGC	57.776	55.556	0.00	0.00	43.61	4.58
87	88	1.299321	TGGTCTTGCCATCATCGCA	59.701	52.632	0.00	0.00	43.61	5.10
88	89	1.026182	TGGTCTTGCCATCATCGCAC	61.026	55.000	0.00	0.00	43.61	5.34
89	90	1.026182	GGTCTTGCCATCATCGCACA	61.026	55.000	0.00	0.00	35.56	4.57
90	91	0.097674	GTCTTGCCATCATCGCACAC	59.902	55.000	0.00	0.00	35.56	3.82
91	92	0.321475	TCTTGCCATCATCGCACACA	60.321	50.000	0.00	0.00	35.56	3.72
92	93	0.522626	CTTGCCATCATCGCACACAA	59.477	50.000	0.00	0.00	35.56	3.33
93	94	1.133598	CTTGCCATCATCGCACACAAT	59.866	47.619	0.00	0.00	35.56	2.71
94	95	0.734309	TGCCATCATCGCACACAATC	59.266	50.000	0.00	0.00	0.00	2.67
95	96	1.019673	GCCATCATCGCACACAATCT	58.980	50.000	0.00	0.00	0.00	2.40
96	97	1.268386	GCCATCATCGCACACAATCTG	60.268	52.381	0.00	0.00	0.00	2.90
97	98	1.332686	CCATCATCGCACACAATCTGG	59.667	52.381	0.00	0.00	0.00	3.86
98	99	2.282407	CATCATCGCACACAATCTGGA	58.718	47.619	0.00	0.00	0.00	3.86
99	100	2.696989	TCATCGCACACAATCTGGAT	57.303	45.000	0.00	0.00	0.00	3.41
100	101	2.282407	TCATCGCACACAATCTGGATG	58.718	47.619	0.00	0.00	34.17	3.51
101	102	1.019673	ATCGCACACAATCTGGATGC	58.980	50.000	0.00	0.00	0.00	3.91
102	103	1.026182	TCGCACACAATCTGGATGCC	61.026	55.000	0.00	0.00	31.24	4.40
103	104	1.307355	CGCACACAATCTGGATGCCA	61.307	55.000	0.00	0.00	31.24	4.92
104	105	0.889994	GCACACAATCTGGATGCCAA	59.110	50.000	0.00	0.00	30.80	4.52
105	106	1.273048	GCACACAATCTGGATGCCAAA	59.727	47.619	0.00	0.00	30.80	3.28
106	107	2.288948	GCACACAATCTGGATGCCAAAA	60.289	45.455	0.00	0.00	30.80	2.44
107	108	3.581755	CACACAATCTGGATGCCAAAAG	58.418	45.455	0.00	0.00	30.80	2.27
108	109	3.006110	CACACAATCTGGATGCCAAAAGT	59.994	43.478	0.00	0.00	30.80	2.66
109	110	4.218200	CACACAATCTGGATGCCAAAAGTA	59.782	41.667	0.00	0.00	30.80	2.24
110	111	4.832266	ACACAATCTGGATGCCAAAAGTAA	59.168	37.500	0.00	0.00	30.80	2.24
111	112	5.304101	ACACAATCTGGATGCCAAAAGTAAA	59.696	36.000	0.00	0.00	30.80	2.01
112	113	5.865552	CACAATCTGGATGCCAAAAGTAAAG	59.134	40.000	0.00	0.00	30.80	1.85
113	114	5.539955	ACAATCTGGATGCCAAAAGTAAAGT	59.460	36.000	0.00	0.00	30.80	2.66
114	115	6.719370	ACAATCTGGATGCCAAAAGTAAAGTA	59.281	34.615	0.00	0.00	30.80	2.24
115	116	6.759497	ATCTGGATGCCAAAAGTAAAGTAC	57.241	37.500	0.00	0.00	30.80	2.73
116	117	5.626142	TCTGGATGCCAAAAGTAAAGTACA	58.374	37.500	0.00	0.00	30.80	2.90
117	118	5.472137	TCTGGATGCCAAAAGTAAAGTACAC	59.528	40.000	0.00	0.00	30.80	2.90
118	119	5.133941	TGGATGCCAAAAGTAAAGTACACA	58.866	37.500	0.00	0.00	0.00	3.72
119	120	5.594725	TGGATGCCAAAAGTAAAGTACACAA	59.405	36.000	0.00	0.00	0.00	3.33
120	121	6.096987	TGGATGCCAAAAGTAAAGTACACAAA	59.903	34.615	0.00	0.00	0.00	2.83
121	122	7.151976	GGATGCCAAAAGTAAAGTACACAAAT	58.848	34.615	0.00	0.00	0.00	2.32
122	123	8.301002	GGATGCCAAAAGTAAAGTACACAAATA	58.699	33.333	0.00	0.00	0.00	1.40
123	124	9.341899	GATGCCAAAAGTAAAGTACACAAATAG	57.658	33.333	0.00	0.00	0.00	1.73
124	125	7.142680	TGCCAAAAGTAAAGTACACAAATAGC	58.857	34.615	0.00	0.00	0.00	2.97
125	126	7.013846	TGCCAAAAGTAAAGTACACAAATAGCT	59.986	33.333	0.00	0.00	0.00	3.32
126	127	7.537649	GCCAAAAGTAAAGTACACAAATAGCTC	59.462	37.037	0.00	0.00	0.00	4.09
127	128	8.021396	CCAAAAGTAAAGTACACAAATAGCTCC	58.979	37.037	0.00	0.00	0.00	4.70
128	129	8.784043	CAAAAGTAAAGTACACAAATAGCTCCT	58.216	33.333	0.00	0.00	0.00	3.69
129	130	8.919777	AAAGTAAAGTACACAAATAGCTCCTT	57.080	30.769	0.00	0.00	0.00	3.36
130	131	8.919777	AAGTAAAGTACACAAATAGCTCCTTT	57.080	30.769	0.00	0.00	0.00	3.11
138	139	9.665264	GTACACAAATAGCTCCTTTATTATTGC	57.335	33.333	0.00	0.00	0.00	3.56
139	140	8.525290	ACACAAATAGCTCCTTTATTATTGCT	57.475	30.769	0.00	0.00	34.92	3.91
140	141	8.624776	ACACAAATAGCTCCTTTATTATTGCTC	58.375	33.333	0.00	0.00	32.72	4.26
141	142	8.623903	CACAAATAGCTCCTTTATTATTGCTCA	58.376	33.333	0.00	0.00	32.72	4.26
142	143	9.359653	ACAAATAGCTCCTTTATTATTGCTCAT	57.640	29.630	0.00	0.00	32.72	2.90
143	144	9.837525	CAAATAGCTCCTTTATTATTGCTCATC	57.162	33.333	0.00	0.00	32.72	2.92
144	145	8.572855	AATAGCTCCTTTATTATTGCTCATCC	57.427	34.615	0.00	0.00	32.72	3.51
145	146	4.999950	AGCTCCTTTATTATTGCTCATCCG	59.000	41.667	0.00	0.00	0.00	4.18
146	147	4.757149	GCTCCTTTATTATTGCTCATCCGT	59.243	41.667	0.00	0.00	0.00	4.69
147	148	5.106908	GCTCCTTTATTATTGCTCATCCGTC	60.107	44.000	0.00	0.00	0.00	4.79
148	149	5.305585	TCCTTTATTATTGCTCATCCGTCC	58.694	41.667	0.00	0.00	0.00	4.79
149	150	5.071788	TCCTTTATTATTGCTCATCCGTCCT	59.928	40.000	0.00	0.00	0.00	3.85
150	151	5.765182	CCTTTATTATTGCTCATCCGTCCTT	59.235	40.000	0.00	0.00	0.00	3.36
151	152	6.263168	CCTTTATTATTGCTCATCCGTCCTTT	59.737	38.462	0.00	0.00	0.00	3.11
152	153	6.861065	TTATTATTGCTCATCCGTCCTTTC	57.139	37.500	0.00	0.00	0.00	2.62
153	154	1.656652	ATTGCTCATCCGTCCTTTCG	58.343	50.000	0.00	0.00	0.00	3.46
154	155	1.019278	TTGCTCATCCGTCCTTTCGC	61.019	55.000	0.00	0.00	0.00	4.70
155	156	2.517450	GCTCATCCGTCCTTTCGCG	61.517	63.158	0.00	0.00	0.00	5.87
156	157	1.138883	CTCATCCGTCCTTTCGCGA	59.861	57.895	3.71	3.71	0.00	5.87
157	158	0.867753	CTCATCCGTCCTTTCGCGAG	60.868	60.000	9.59	0.00	0.00	5.03
158	159	2.202756	ATCCGTCCTTTCGCGAGC	60.203	61.111	9.59	0.00	0.00	5.03
159	160	3.001902	ATCCGTCCTTTCGCGAGCA	62.002	57.895	9.59	0.00	0.00	4.26
160	161	2.501223	ATCCGTCCTTTCGCGAGCAA	62.501	55.000	9.59	0.00	0.00	3.91
161	162	2.314647	CCGTCCTTTCGCGAGCAAA	61.315	57.895	9.59	0.00	0.00	3.68
162	163	1.154654	CGTCCTTTCGCGAGCAAAC	60.155	57.895	9.59	6.31	0.00	2.93
163	164	1.206831	GTCCTTTCGCGAGCAAACC	59.793	57.895	9.59	0.00	0.00	3.27
164	165	1.964373	TCCTTTCGCGAGCAAACCC	60.964	57.895	9.59	0.00	0.00	4.11
165	166	1.966451	CCTTTCGCGAGCAAACCCT	60.966	57.895	9.59	0.00	0.00	4.34
166	167	1.497722	CTTTCGCGAGCAAACCCTC	59.502	57.895	9.59	0.00	0.00	4.30
167	168	1.227704	TTTCGCGAGCAAACCCTCA	60.228	52.632	9.59	0.00	0.00	3.86
168	169	1.227999	TTTCGCGAGCAAACCCTCAG	61.228	55.000	9.59	0.00	0.00	3.35
169	170	3.121030	CGCGAGCAAACCCTCAGG	61.121	66.667	0.00	0.00	40.04	3.86
216	217	3.382832	CGCCCCTCTCGTGACCTT	61.383	66.667	0.00	0.00	0.00	3.50
217	218	2.266055	GCCCCTCTCGTGACCTTG	59.734	66.667	0.00	0.00	0.00	3.61
218	219	2.283529	GCCCCTCTCGTGACCTTGA	61.284	63.158	0.00	0.00	0.00	3.02
219	220	1.592223	CCCCTCTCGTGACCTTGAC	59.408	63.158	0.00	0.00	0.00	3.18
220	221	1.592223	CCCTCTCGTGACCTTGACC	59.408	63.158	0.00	0.00	0.00	4.02
221	222	0.900647	CCCTCTCGTGACCTTGACCT	60.901	60.000	0.00	0.00	0.00	3.85
222	223	0.528470	CCTCTCGTGACCTTGACCTC	59.472	60.000	0.00	0.00	0.00	3.85
223	224	0.169230	CTCTCGTGACCTTGACCTCG	59.831	60.000	0.00	0.00	0.00	4.63
224	225	0.250597	TCTCGTGACCTTGACCTCGA	60.251	55.000	0.00	0.00	0.00	4.04
225	226	0.169230	CTCGTGACCTTGACCTCGAG	59.831	60.000	5.13	5.13	38.63	4.04
226	227	1.444553	CGTGACCTTGACCTCGAGC	60.445	63.158	6.99	0.00	0.00	5.03
227	228	1.666011	GTGACCTTGACCTCGAGCA	59.334	57.895	6.99	0.00	0.00	4.26
228	229	0.033504	GTGACCTTGACCTCGAGCAA	59.966	55.000	6.99	6.10	0.00	3.91
229	230	0.033504	TGACCTTGACCTCGAGCAAC	59.966	55.000	6.99	0.77	0.00	4.17
230	231	0.033504	GACCTTGACCTCGAGCAACA	59.966	55.000	6.99	3.61	0.00	3.33
231	232	0.034059	ACCTTGACCTCGAGCAACAG	59.966	55.000	6.99	0.00	0.00	3.16
232	233	0.318441	CCTTGACCTCGAGCAACAGA	59.682	55.000	6.99	0.00	0.00	3.41
233	234	1.671261	CCTTGACCTCGAGCAACAGAG	60.671	57.143	6.99	6.85	0.00	3.35
234	235	0.319900	TTGACCTCGAGCAACAGAGC	60.320	55.000	6.99	0.00	33.39	4.09
235	236	1.446966	GACCTCGAGCAACAGAGCC	60.447	63.158	6.99	0.00	33.39	4.70
236	237	2.159819	GACCTCGAGCAACAGAGCCA	62.160	60.000	6.99	0.00	33.39	4.75
237	238	1.004560	CCTCGAGCAACAGAGCCAA	60.005	57.895	6.99	0.00	33.39	4.52
238	239	0.392193	CCTCGAGCAACAGAGCCAAT	60.392	55.000	6.99	0.00	33.39	3.16
239	240	1.005340	CTCGAGCAACAGAGCCAATC	58.995	55.000	0.00	0.00	34.23	2.67
240	241	0.737367	TCGAGCAACAGAGCCAATCG	60.737	55.000	0.00	0.00	32.91	3.34
241	242	1.016130	CGAGCAACAGAGCCAATCGT	61.016	55.000	0.00	0.00	34.23	3.73
242	243	0.445436	GAGCAACAGAGCCAATCGTG	59.555	55.000	0.00	0.00	34.23	4.35
243	244	0.035317	AGCAACAGAGCCAATCGTGA	59.965	50.000	0.00	0.00	34.23	4.35
244	245	0.166814	GCAACAGAGCCAATCGTGAC	59.833	55.000	0.00	0.00	0.00	3.67
245	246	1.800805	CAACAGAGCCAATCGTGACT	58.199	50.000	0.00	0.00	0.00	3.41
246	247	2.146342	CAACAGAGCCAATCGTGACTT	58.854	47.619	0.00	0.00	0.00	3.01
247	248	1.800805	ACAGAGCCAATCGTGACTTG	58.199	50.000	0.00	0.00	0.00	3.16
248	249	0.445436	CAGAGCCAATCGTGACTTGC	59.555	55.000	0.00	0.00	0.00	4.01
249	250	0.322975	AGAGCCAATCGTGACTTGCT	59.677	50.000	0.00	0.00	0.00	3.91
250	251	1.550524	AGAGCCAATCGTGACTTGCTA	59.449	47.619	0.00	0.00	0.00	3.49
251	252	1.929836	GAGCCAATCGTGACTTGCTAG	59.070	52.381	0.00	0.00	0.00	3.42
252	253	0.375106	GCCAATCGTGACTTGCTAGC	59.625	55.000	8.10	8.10	0.00	3.42
253	254	2.009042	GCCAATCGTGACTTGCTAGCT	61.009	52.381	17.23	0.00	0.00	3.32
254	255	1.929836	CCAATCGTGACTTGCTAGCTC	59.070	52.381	17.23	5.86	0.00	4.09
255	256	1.585668	CAATCGTGACTTGCTAGCTCG	59.414	52.381	17.23	9.21	0.00	5.03
256	257	1.095600	ATCGTGACTTGCTAGCTCGA	58.904	50.000	17.23	15.07	32.45	4.04
257	258	0.168348	TCGTGACTTGCTAGCTCGAC	59.832	55.000	17.23	7.70	0.00	4.20
258	259	0.169230	CGTGACTTGCTAGCTCGACT	59.831	55.000	17.23	0.00	0.00	4.18
259	260	1.401670	CGTGACTTGCTAGCTCGACTT	60.402	52.381	17.23	0.00	0.00	3.01
260	261	1.989165	GTGACTTGCTAGCTCGACTTG	59.011	52.381	17.23	0.97	0.00	3.16
261	262	0.995728	GACTTGCTAGCTCGACTTGC	59.004	55.000	17.23	12.01	45.98	4.01
264	265	4.900154	GCTAGCTCGACTTGCAGT	57.100	55.556	7.70	0.00	45.23	4.40
265	266	2.659740	GCTAGCTCGACTTGCAGTC	58.340	57.895	7.70	6.31	45.23	3.51
266	267	0.172352	GCTAGCTCGACTTGCAGTCT	59.828	55.000	7.70	0.14	45.23	3.24
267	268	1.797348	GCTAGCTCGACTTGCAGTCTC	60.797	57.143	7.70	4.41	45.23	3.36
268	269	0.448197	TAGCTCGACTTGCAGTCTCG	59.552	55.000	12.45	8.51	42.92	4.04
269	270	1.210413	GCTCGACTTGCAGTCTCGA	59.790	57.895	10.78	10.78	42.92	4.04
270	271	0.179150	GCTCGACTTGCAGTCTCGAT	60.179	55.000	11.45	0.00	42.92	3.59
271	272	1.734047	GCTCGACTTGCAGTCTCGATT	60.734	52.381	11.45	0.00	42.92	3.34
272	273	1.916651	CTCGACTTGCAGTCTCGATTG	59.083	52.381	11.45	0.65	42.92	2.67
273	274	0.994995	CGACTTGCAGTCTCGATTGG	59.005	55.000	12.45	0.00	42.92	3.16
274	275	1.363744	GACTTGCAGTCTCGATTGGG	58.636	55.000	8.50	0.00	41.88	4.12
275	276	0.036010	ACTTGCAGTCTCGATTGGGG	60.036	55.000	0.00	0.00	0.00	4.96
276	277	0.250234	CTTGCAGTCTCGATTGGGGA	59.750	55.000	0.00	0.00	0.00	4.81
277	278	0.250234	TTGCAGTCTCGATTGGGGAG	59.750	55.000	0.00	0.00	0.00	4.30
278	279	1.522580	GCAGTCTCGATTGGGGAGC	60.523	63.158	0.00	0.00	0.00	4.70
279	280	1.965754	GCAGTCTCGATTGGGGAGCT	61.966	60.000	0.00	0.00	0.00	4.09
280	281	0.539051	CAGTCTCGATTGGGGAGCTT	59.461	55.000	0.00	0.00	0.00	3.74
281	282	1.065854	CAGTCTCGATTGGGGAGCTTT	60.066	52.381	0.00	0.00	0.00	3.51
282	283	1.630878	AGTCTCGATTGGGGAGCTTTT	59.369	47.619	0.00	0.00	0.00	2.27
283	284	2.838202	AGTCTCGATTGGGGAGCTTTTA	59.162	45.455	0.00	0.00	0.00	1.52
284	285	3.456277	AGTCTCGATTGGGGAGCTTTTAT	59.544	43.478	0.00	0.00	0.00	1.40
285	286	3.561725	GTCTCGATTGGGGAGCTTTTATG	59.438	47.826	0.00	0.00	0.00	1.90
286	287	3.454447	TCTCGATTGGGGAGCTTTTATGA	59.546	43.478	0.00	0.00	0.00	2.15
287	288	3.541632	TCGATTGGGGAGCTTTTATGAC	58.458	45.455	0.00	0.00	0.00	3.06
288	289	2.287915	CGATTGGGGAGCTTTTATGACG	59.712	50.000	0.00	0.00	0.00	4.35
289	290	2.871096	TTGGGGAGCTTTTATGACGT	57.129	45.000	0.00	0.00	0.00	4.34
290	291	2.396590	TGGGGAGCTTTTATGACGTC	57.603	50.000	9.11	9.11	0.00	4.34
291	292	1.287425	GGGGAGCTTTTATGACGTCG	58.713	55.000	11.62	0.00	0.00	5.12
292	293	0.651031	GGGAGCTTTTATGACGTCGC	59.349	55.000	11.62	6.92	0.00	5.19
293	294	1.641577	GGAGCTTTTATGACGTCGCT	58.358	50.000	11.62	12.01	0.00	4.93
294	295	2.000447	GGAGCTTTTATGACGTCGCTT	59.000	47.619	11.62	0.70	0.00	4.68
295	296	2.029365	GGAGCTTTTATGACGTCGCTTC	59.971	50.000	11.62	7.23	0.00	3.86
296	297	2.000447	AGCTTTTATGACGTCGCTTCC	59.000	47.619	11.62	0.00	0.00	3.46
297	298	2.000447	GCTTTTATGACGTCGCTTCCT	59.000	47.619	11.62	0.00	0.00	3.36
298	299	3.119245	AGCTTTTATGACGTCGCTTCCTA	60.119	43.478	11.62	0.00	0.00	2.94
299	300	3.243177	GCTTTTATGACGTCGCTTCCTAG	59.757	47.826	11.62	3.60	0.00	3.02
300	301	4.421948	CTTTTATGACGTCGCTTCCTAGT	58.578	43.478	11.62	0.00	0.00	2.57
301	302	3.687572	TTATGACGTCGCTTCCTAGTC	57.312	47.619	11.62	0.00	0.00	2.59
302	303	0.739561	ATGACGTCGCTTCCTAGTCC	59.260	55.000	11.62	0.00	0.00	3.85
303	304	0.322277	TGACGTCGCTTCCTAGTCCT	60.322	55.000	11.62	0.00	0.00	3.85
304	305	0.099082	GACGTCGCTTCCTAGTCCTG	59.901	60.000	0.00	0.00	0.00	3.86
305	306	0.608582	ACGTCGCTTCCTAGTCCTGT	60.609	55.000	0.00	0.00	0.00	4.00
306	307	0.099082	CGTCGCTTCCTAGTCCTGTC	59.901	60.000	0.00	0.00	0.00	3.51
307	308	0.456628	GTCGCTTCCTAGTCCTGTCC	59.543	60.000	0.00	0.00	0.00	4.02
308	309	0.039180	TCGCTTCCTAGTCCTGTCCA	59.961	55.000	0.00	0.00	0.00	4.02
309	310	0.457851	CGCTTCCTAGTCCTGTCCAG	59.542	60.000	0.00	0.00	0.00	3.86
310	311	1.562783	GCTTCCTAGTCCTGTCCAGT	58.437	55.000	0.00	0.00	0.00	4.00
311	312	1.205893	GCTTCCTAGTCCTGTCCAGTG	59.794	57.143	0.00	0.00	0.00	3.66
312	313	2.808919	CTTCCTAGTCCTGTCCAGTGA	58.191	52.381	0.00	0.00	0.00	3.41
313	314	2.217510	TCCTAGTCCTGTCCAGTGAC	57.782	55.000	0.00	7.45	42.12	3.67
314	315	1.711375	TCCTAGTCCTGTCCAGTGACT	59.289	52.381	16.98	16.98	42.28	3.41
315	316	2.096248	CCTAGTCCTGTCCAGTGACTC	58.904	57.143	16.55	0.00	42.28	3.36
316	317	2.291282	CCTAGTCCTGTCCAGTGACTCT	60.291	54.545	16.55	3.75	42.28	3.24
317	318	1.917872	AGTCCTGTCCAGTGACTCTC	58.082	55.000	10.68	0.00	42.28	3.20
318	319	0.892063	GTCCTGTCCAGTGACTCTCC	59.108	60.000	0.00	0.00	42.28	3.71
319	320	0.251832	TCCTGTCCAGTGACTCTCCC	60.252	60.000	0.00	0.00	42.28	4.30
320	321	1.261238	CCTGTCCAGTGACTCTCCCC	61.261	65.000	0.00	0.00	42.28	4.81
321	322	0.252012	CTGTCCAGTGACTCTCCCCT	60.252	60.000	0.00	0.00	42.28	4.79
322	323	0.191064	TGTCCAGTGACTCTCCCCTT	59.809	55.000	0.00	0.00	42.28	3.95
323	324	1.353091	GTCCAGTGACTCTCCCCTTT	58.647	55.000	0.00	0.00	38.53	3.11
324	325	1.700186	GTCCAGTGACTCTCCCCTTTT	59.300	52.381	0.00	0.00	38.53	2.27
325	326	1.699634	TCCAGTGACTCTCCCCTTTTG	59.300	52.381	0.00	0.00	0.00	2.44
326	327	1.421646	CCAGTGACTCTCCCCTTTTGT	59.578	52.381	0.00	0.00	0.00	2.83
327	328	2.158608	CCAGTGACTCTCCCCTTTTGTT	60.159	50.000	0.00	0.00	0.00	2.83
328	329	2.880890	CAGTGACTCTCCCCTTTTGTTG	59.119	50.000	0.00	0.00	0.00	3.33
329	330	1.609072	GTGACTCTCCCCTTTTGTTGC	59.391	52.381	0.00	0.00	0.00	4.17
330	331	1.248486	GACTCTCCCCTTTTGTTGCC	58.752	55.000	0.00	0.00	0.00	4.52
331	332	0.853530	ACTCTCCCCTTTTGTTGCCT	59.146	50.000	0.00	0.00	0.00	4.75
332	333	2.039879	GACTCTCCCCTTTTGTTGCCTA	59.960	50.000	0.00	0.00	0.00	3.93
333	334	2.445525	ACTCTCCCCTTTTGTTGCCTAA	59.554	45.455	0.00	0.00	0.00	2.69
334	335	3.084786	CTCTCCCCTTTTGTTGCCTAAG	58.915	50.000	0.00	0.00	0.00	2.18
335	336	2.171003	CTCCCCTTTTGTTGCCTAAGG	58.829	52.381	0.00	0.00	38.51	2.69
336	337	1.501604	TCCCCTTTTGTTGCCTAAGGT	59.498	47.619	0.00	0.00	37.35	3.50
337	338	2.090999	TCCCCTTTTGTTGCCTAAGGTT	60.091	45.455	0.00	0.00	37.35	3.50
338	339	2.703536	CCCCTTTTGTTGCCTAAGGTTT	59.296	45.455	0.00	0.00	37.35	3.27
339	340	3.135712	CCCCTTTTGTTGCCTAAGGTTTT	59.864	43.478	0.00	0.00	37.35	2.43
340	341	4.384757	CCCCTTTTGTTGCCTAAGGTTTTT	60.385	41.667	0.00	0.00	37.35	1.94
371	372	6.514376	CGAAATAGTTGTTGCCTAAGGTTTGT	60.514	38.462	0.00	0.00	0.00	2.83
401	402	3.257393	GAATCCGAGCTATGCCATGTAG	58.743	50.000	0.00	0.00	0.00	2.74
402	403	1.704641	TCCGAGCTATGCCATGTAGT	58.295	50.000	0.00	0.00	0.00	2.73
403	404	2.871453	TCCGAGCTATGCCATGTAGTA	58.129	47.619	0.00	0.00	0.00	1.82
404	405	3.431415	TCCGAGCTATGCCATGTAGTAT	58.569	45.455	0.00	0.00	0.00	2.12
405	406	3.444034	TCCGAGCTATGCCATGTAGTATC	59.556	47.826	0.00	0.00	0.00	2.24
407	408	4.419280	CGAGCTATGCCATGTAGTATCAG	58.581	47.826	0.00	0.00	0.00	2.90
408	409	4.082517	CGAGCTATGCCATGTAGTATCAGT	60.083	45.833	0.00	0.00	0.00	3.41
409	410	5.144692	AGCTATGCCATGTAGTATCAGTG	57.855	43.478	0.00	0.00	0.00	3.66
410	411	4.590647	AGCTATGCCATGTAGTATCAGTGT	59.409	41.667	0.00	0.00	0.00	3.55
411	412	4.687948	GCTATGCCATGTAGTATCAGTGTG	59.312	45.833	0.00	0.00	0.00	3.82
412	413	5.509670	GCTATGCCATGTAGTATCAGTGTGA	60.510	44.000	0.00	0.00	0.00	3.58
413	414	4.817318	TGCCATGTAGTATCAGTGTGAA	57.183	40.909	0.00	0.00	0.00	3.18
414	415	5.357742	TGCCATGTAGTATCAGTGTGAAT	57.642	39.130	0.00	0.00	0.00	2.57
415	416	5.359756	TGCCATGTAGTATCAGTGTGAATC	58.640	41.667	0.00	0.00	0.00	2.52
460	461	0.827507	AAACCTGCAATGGCGTCCTT	60.828	50.000	0.00	0.00	45.35	3.36
479	480	7.012421	GCGTCCTTATTTCTCCACTAAAATGAT	59.988	37.037	0.00	0.00	0.00	2.45
488	489	5.047306	TCTCCACTAAAATGATGTGTCGTCT	60.047	40.000	0.00	0.00	0.00	4.18
494	495	5.725110	AAAATGATGTGTCGTCTCATAGC	57.275	39.130	0.00	0.00	0.00	2.97
495	496	4.662468	AATGATGTGTCGTCTCATAGCT	57.338	40.909	0.00	0.00	0.00	3.32
496	497	5.774498	AATGATGTGTCGTCTCATAGCTA	57.226	39.130	0.00	0.00	0.00	3.32
497	498	4.820284	TGATGTGTCGTCTCATAGCTAG	57.180	45.455	0.00	0.00	0.00	3.42
498	499	3.565902	TGATGTGTCGTCTCATAGCTAGG	59.434	47.826	0.00	0.00	0.00	3.02
499	500	2.298610	TGTGTCGTCTCATAGCTAGGG	58.701	52.381	5.42	0.00	0.00	3.53
500	501	2.092592	TGTGTCGTCTCATAGCTAGGGA	60.093	50.000	5.42	1.68	0.00	4.20
501	502	3.150767	GTGTCGTCTCATAGCTAGGGAT	58.849	50.000	5.42	0.00	0.00	3.85
502	503	4.202430	TGTGTCGTCTCATAGCTAGGGATA	60.202	45.833	5.42	0.00	0.00	2.59
506	507	3.637769	GTCTCATAGCTAGGGATAGGGG	58.362	54.545	5.42	0.00	0.00	4.79
517	518	2.285818	ATAGGGGTTGCCGTCCCA	60.286	61.111	9.59	0.00	46.26	4.37
526	527	4.101448	GCCGTCCCAGGTGATGCT	62.101	66.667	0.00	0.00	0.00	3.79
527	528	2.731571	GCCGTCCCAGGTGATGCTA	61.732	63.158	0.00	0.00	0.00	3.49
528	529	1.443407	CCGTCCCAGGTGATGCTAG	59.557	63.158	0.00	0.00	0.00	3.42
532	533	2.615493	CGTCCCAGGTGATGCTAGTTTT	60.615	50.000	0.00	0.00	0.00	2.43
536	537	3.441572	CCCAGGTGATGCTAGTTTTCAAG	59.558	47.826	0.00	0.00	0.00	3.02
537	538	4.074970	CCAGGTGATGCTAGTTTTCAAGT	58.925	43.478	0.00	0.00	0.00	3.16
543	544	4.692625	TGATGCTAGTTTTCAAGTGCTCTC	59.307	41.667	0.00	0.00	0.00	3.20
546	547	3.495001	GCTAGTTTTCAAGTGCTCTCGTT	59.505	43.478	0.00	0.00	0.00	3.85
547	548	4.024809	GCTAGTTTTCAAGTGCTCTCGTTT	60.025	41.667	0.00	0.00	0.00	3.60
551	552	3.386768	TTCAAGTGCTCTCGTTTAGCT	57.613	42.857	0.00	0.00	40.73	3.32
552	553	3.386768	TCAAGTGCTCTCGTTTAGCTT	57.613	42.857	0.00	0.00	40.73	3.74
554	555	3.494626	TCAAGTGCTCTCGTTTAGCTTTG	59.505	43.478	0.00	10.63	40.73	2.77
555	556	3.113260	AGTGCTCTCGTTTAGCTTTGT	57.887	42.857	0.00	0.00	40.73	2.83
556	557	2.802816	AGTGCTCTCGTTTAGCTTTGTG	59.197	45.455	0.00	0.00	40.73	3.33
565	572	5.231702	TCGTTTAGCTTTGTGTGTGCTATA	58.768	37.500	0.00	0.00	38.80	1.31
589	601	2.159585	TGTTTGCATTATCGGTTGAGCG	60.160	45.455	0.00	0.00	0.00	5.03
594	606	0.597637	ATTATCGGTTGAGCGGCTCG	60.598	55.000	23.72	13.40	32.35	5.03
607	619	2.045926	GCTCGGCCAGGTGTTGAT	60.046	61.111	2.24	0.00	0.00	2.57
614	626	1.589716	GCCAGGTGTTGATGCTGGAC	61.590	60.000	0.00	0.00	37.37	4.02
645	657	2.360483	TCGTTGGTGCATGAACACATTT	59.640	40.909	6.08	0.00	42.55	2.32
647	659	2.702898	TGGTGCATGAACACATTTCG	57.297	45.000	6.08	0.00	42.55	3.46
652	664	2.819019	TGCATGAACACATTTCGTCCAT	59.181	40.909	0.00	0.00	0.00	3.41
654	666	3.609373	GCATGAACACATTTCGTCCATTG	59.391	43.478	0.00	0.00	0.00	2.82
655	667	3.913548	TGAACACATTTCGTCCATTGG	57.086	42.857	0.00	0.00	0.00	3.16
656	668	2.556189	TGAACACATTTCGTCCATTGGG	59.444	45.455	2.09	0.00	0.00	4.12
657	669	2.577606	ACACATTTCGTCCATTGGGA	57.422	45.000	2.09	0.00	42.29	4.37
670	682	1.221265	CATTGGGATGGGAAGGGGAAT	59.779	52.381	0.00	0.00	0.00	3.01
671	683	1.403089	TTGGGATGGGAAGGGGAATT	58.597	50.000	0.00	0.00	0.00	2.17
677	689	5.198840	TGGGATGGGAAGGGGAATTAATTAA	59.801	40.000	0.00	0.00	0.00	1.40
683	695	6.962902	TGGGAAGGGGAATTAATTAATGTTGT	59.037	34.615	11.42	0.00	0.00	3.32
702	718	9.480053	AATGTTGTCAACTTTCCTGATTTAATG	57.520	29.630	16.45	0.00	0.00	1.90
723	740	9.689976	TTAATGTGAATTACCATTGTTGTCAAG	57.310	29.630	10.74	0.00	36.97	3.02
724	741	6.951062	TGTGAATTACCATTGTTGTCAAGA	57.049	33.333	0.00	0.00	36.97	3.02
733	750	9.906660	TTACCATTGTTGTCAAGATCAATTAAC	57.093	29.630	0.00	0.00	36.97	2.01
823	840	9.793259	TTCCTAATTTATGGACCATGTATTCTC	57.207	33.333	17.73	0.00	31.24	2.87
824	841	8.944138	TCCTAATTTATGGACCATGTATTCTCA	58.056	33.333	17.73	1.75	0.00	3.27
825	842	9.745018	CCTAATTTATGGACCATGTATTCTCAT	57.255	33.333	17.73	0.00	0.00	2.90
881	898	9.586435	AAATCGCTAAAAATAAGGAGAATTTGG	57.414	29.630	0.00	0.00	0.00	3.28
882	899	6.560711	TCGCTAAAAATAAGGAGAATTTGGC	58.439	36.000	0.00	0.00	35.11	4.52
883	900	5.748630	CGCTAAAAATAAGGAGAATTTGGCC	59.251	40.000	0.00	0.00	35.03	5.36
884	901	6.627065	CGCTAAAAATAAGGAGAATTTGGCCA	60.627	38.462	0.00	0.00	35.03	5.36
885	902	7.275183	GCTAAAAATAAGGAGAATTTGGCCAT	58.725	34.615	6.09	0.00	33.16	4.40
886	903	7.439356	GCTAAAAATAAGGAGAATTTGGCCATC	59.561	37.037	6.09	0.05	33.16	3.51
887	904	5.520376	AAATAAGGAGAATTTGGCCATCG	57.480	39.130	6.09	0.00	0.00	3.84
888	905	2.514458	AAGGAGAATTTGGCCATCGT	57.486	45.000	6.09	0.00	0.00	3.73
889	906	1.755179	AGGAGAATTTGGCCATCGTG	58.245	50.000	6.09	0.00	0.00	4.35
890	907	1.281867	AGGAGAATTTGGCCATCGTGA	59.718	47.619	6.09	0.00	0.00	4.35
891	908	2.092212	AGGAGAATTTGGCCATCGTGAT	60.092	45.455	6.09	0.00	0.00	3.06
892	909	2.689983	GGAGAATTTGGCCATCGTGATT	59.310	45.455	6.09	2.24	0.00	2.57
893	910	3.882888	GGAGAATTTGGCCATCGTGATTA	59.117	43.478	6.09	0.00	0.00	1.75
894	911	4.023707	GGAGAATTTGGCCATCGTGATTAG	60.024	45.833	6.09	0.00	0.00	1.73
895	912	3.885297	AGAATTTGGCCATCGTGATTAGG	59.115	43.478	6.09	0.00	0.00	2.69
896	913	2.051334	TTTGGCCATCGTGATTAGGG	57.949	50.000	6.09	0.00	0.00	3.53
897	914	0.916086	TTGGCCATCGTGATTAGGGT	59.084	50.000	6.09	0.00	0.00	4.34
898	915	0.468226	TGGCCATCGTGATTAGGGTC	59.532	55.000	0.00	0.00	0.00	4.46
899	916	0.600255	GGCCATCGTGATTAGGGTCG	60.600	60.000	0.00	0.00	0.00	4.79
900	917	1.222115	GCCATCGTGATTAGGGTCGC	61.222	60.000	0.00	0.00	0.00	5.19
901	918	0.389391	CCATCGTGATTAGGGTCGCT	59.611	55.000	0.00	0.00	0.00	4.93
902	919	1.603172	CCATCGTGATTAGGGTCGCTC	60.603	57.143	0.00	0.00	0.00	5.03
903	920	0.311165	ATCGTGATTAGGGTCGCTCG	59.689	55.000	0.00	0.00	0.00	5.03
904	921	1.028330	TCGTGATTAGGGTCGCTCGT	61.028	55.000	0.00	0.00	0.00	4.18
905	922	0.179145	CGTGATTAGGGTCGCTCGTT	60.179	55.000	0.00	0.00	0.00	3.85
906	923	1.734707	CGTGATTAGGGTCGCTCGTTT	60.735	52.381	0.00	0.00	0.00	3.60
907	924	2.344025	GTGATTAGGGTCGCTCGTTTT	58.656	47.619	0.00	0.00	0.00	2.43
908	925	2.740447	GTGATTAGGGTCGCTCGTTTTT	59.260	45.455	0.00	0.00	0.00	1.94
943	960	9.862149	CCTTAGTGGAATAAGGTGGTTATAATT	57.138	33.333	4.97	0.00	44.62	1.40
945	962	9.635404	TTAGTGGAATAAGGTGGTTATAATTGG	57.365	33.333	0.00	0.00	30.55	3.16
946	963	6.549736	AGTGGAATAAGGTGGTTATAATTGGC	59.450	38.462	0.00	0.00	30.55	4.52
947	964	6.322712	GTGGAATAAGGTGGTTATAATTGGCA	59.677	38.462	0.00	0.00	30.55	4.92
948	965	6.897966	TGGAATAAGGTGGTTATAATTGGCAA	59.102	34.615	0.68	0.68	30.55	4.52
949	966	7.400339	TGGAATAAGGTGGTTATAATTGGCAAA	59.600	33.333	3.01	0.00	30.55	3.68
950	967	8.428852	GGAATAAGGTGGTTATAATTGGCAAAT	58.571	33.333	3.01	0.00	30.55	2.32
951	968	9.260002	GAATAAGGTGGTTATAATTGGCAAATG	57.740	33.333	3.01	0.00	30.55	2.32
952	969	5.612725	AGGTGGTTATAATTGGCAAATGG	57.387	39.130	3.01	0.00	0.00	3.16
953	970	5.029474	AGGTGGTTATAATTGGCAAATGGT	58.971	37.500	3.01	0.00	0.00	3.55
954	971	5.104982	AGGTGGTTATAATTGGCAAATGGTG	60.105	40.000	3.01	0.00	0.00	4.17
955	972	5.115480	GTGGTTATAATTGGCAAATGGTGG	58.885	41.667	3.01	0.00	0.00	4.61
956	973	4.780021	TGGTTATAATTGGCAAATGGTGGT	59.220	37.500	3.01	0.00	0.00	4.16
957	974	5.249393	TGGTTATAATTGGCAAATGGTGGTT	59.751	36.000	3.01	0.00	0.00	3.67
958	975	6.176896	GGTTATAATTGGCAAATGGTGGTTT	58.823	36.000	3.01	0.00	0.00	3.27
959	976	6.657117	GGTTATAATTGGCAAATGGTGGTTTT	59.343	34.615	3.01	0.00	0.00	2.43
960	977	7.824779	GGTTATAATTGGCAAATGGTGGTTTTA	59.175	33.333	3.01	0.00	0.00	1.52
961	978	8.661257	GTTATAATTGGCAAATGGTGGTTTTAC	58.339	33.333	3.01	0.00	0.00	2.01
962	979	4.696479	ATTGGCAAATGGTGGTTTTACA	57.304	36.364	3.01	0.00	0.00	2.41
963	980	3.742433	TGGCAAATGGTGGTTTTACAG	57.258	42.857	0.00	0.00	0.00	2.74
964	981	3.034635	TGGCAAATGGTGGTTTTACAGT	58.965	40.909	0.00	0.00	0.00	3.55
965	982	4.215908	TGGCAAATGGTGGTTTTACAGTA	58.784	39.130	0.00	0.00	0.00	2.74
966	983	4.279671	TGGCAAATGGTGGTTTTACAGTAG	59.720	41.667	0.00	0.00	0.00	2.57
967	984	4.234574	GCAAATGGTGGTTTTACAGTAGC	58.765	43.478	0.00	0.00	0.00	3.58
968	985	4.261825	GCAAATGGTGGTTTTACAGTAGCA	60.262	41.667	0.00	0.00	0.00	3.49
969	986	5.460646	CAAATGGTGGTTTTACAGTAGCAG	58.539	41.667	0.00	0.00	0.00	4.24
970	987	2.500229	TGGTGGTTTTACAGTAGCAGC	58.500	47.619	0.00	0.00	39.82	5.25
971	988	2.158740	TGGTGGTTTTACAGTAGCAGCA	60.159	45.455	0.00	2.46	44.79	4.41
972	989	2.484264	GGTGGTTTTACAGTAGCAGCAG	59.516	50.000	0.00	0.00	39.36	4.24
973	990	3.399330	GTGGTTTTACAGTAGCAGCAGA	58.601	45.455	0.00	0.00	0.00	4.26
974	991	4.003648	GTGGTTTTACAGTAGCAGCAGAT	58.996	43.478	0.00	0.00	0.00	2.90
975	992	4.093556	GTGGTTTTACAGTAGCAGCAGATC	59.906	45.833	0.00	0.00	0.00	2.75
976	993	3.623510	GGTTTTACAGTAGCAGCAGATCC	59.376	47.826	0.00	0.00	0.00	3.36
977	994	3.543680	TTTACAGTAGCAGCAGATCCC	57.456	47.619	0.00	0.00	0.00	3.85
978	995	1.032794	TACAGTAGCAGCAGATCCCG	58.967	55.000	0.00	0.00	0.00	5.14
979	996	1.068753	CAGTAGCAGCAGATCCCGG	59.931	63.158	0.00	0.00	0.00	5.73
980	997	1.381872	AGTAGCAGCAGATCCCGGT	60.382	57.895	0.00	0.00	0.00	5.28
981	998	1.068250	GTAGCAGCAGATCCCGGTC	59.932	63.158	0.00	0.00	0.00	4.79
982	999	2.134287	TAGCAGCAGATCCCGGTCC	61.134	63.158	0.00	0.00	0.00	4.46
983	1000	2.589610	TAGCAGCAGATCCCGGTCCT	62.590	60.000	0.00	0.00	0.00	3.85
984	1001	2.818132	CAGCAGATCCCGGTCCTC	59.182	66.667	0.00	0.00	0.00	3.71
985	1002	2.444895	AGCAGATCCCGGTCCTCC	60.445	66.667	0.00	0.00	0.00	4.30
1135	1152	3.797353	GCCATCCCTTCCTCCGCA	61.797	66.667	0.00	0.00	0.00	5.69
1475	1521	3.314331	CGACCAGGTCCACCAGCT	61.314	66.667	14.46	0.00	38.89	4.24
1629	1678	2.550101	GCAATGGCTCGCTGATCCC	61.550	63.158	0.00	0.00	36.96	3.85
1635	1684	1.953138	GCTCGCTGATCCCATCACG	60.953	63.158	0.00	0.00	35.06	4.35
1857	1939	6.737720	ATGCTTACCATCTCTGATCAAGTA	57.262	37.500	0.00	0.00	0.00	2.24
2017	2126	4.229582	TGCTCCTAACTGGGTATCCAAAAT	59.770	41.667	0.00	0.00	43.51	1.82
2070	2179	4.942944	TGGATCTCCAGACTTTACAGGTA	58.057	43.478	0.00	0.00	42.01	3.08
2275	2409	9.190858	GCATTATCATTATAATTTGCCAAACGA	57.809	29.630	0.00	0.00	36.36	3.85
2576	2771	5.538433	TCTTGTACATTTTCCCCTCCTTTTG	59.462	40.000	0.00	0.00	0.00	2.44
2790	2998	1.202627	GGATTTTGTTGGGCTGTGCAA	60.203	47.619	0.00	0.00	0.00	4.08
2878	3086	5.212532	TGAGGCAGCATGTTAATTTTTGT	57.787	34.783	0.00	0.00	39.31	2.83
2909	3119	3.088532	TGGCATTGTCACCAAGTTATCC	58.911	45.455	0.00	0.00	33.17	2.59
2969	3179	0.953727	TGCAGTCAATTGACCACAGC	59.046	50.000	30.34	26.84	45.85	4.40
3039	3249	2.898729	AGCGACTTGGGATCATACTG	57.101	50.000	0.00	0.00	0.00	2.74

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
0	1	4.908601	TCTGGTGGTACATCACTGAAAT	57.091	40.909	0.00	0.00	45.37	2.17
1	2	4.641396	CTTCTGGTGGTACATCACTGAAA	58.359	43.478	0.00	0.00	45.37	2.69
2	3	3.557054	GCTTCTGGTGGTACATCACTGAA	60.557	47.826	0.00	3.81	45.37	3.02
3	4	2.028112	GCTTCTGGTGGTACATCACTGA	60.028	50.000	0.00	0.00	45.37	3.41
4	5	2.289631	TGCTTCTGGTGGTACATCACTG	60.290	50.000	0.00	0.00	45.37	3.66
6	7	2.472695	TGCTTCTGGTGGTACATCAC	57.527	50.000	0.00	0.00	45.37	3.06
8	9	4.546570	GTTTTTGCTTCTGGTGGTACATC	58.453	43.478	0.00	0.00	44.52	3.06
9	10	3.320826	GGTTTTTGCTTCTGGTGGTACAT	59.679	43.478	0.00	0.00	44.52	2.29
10	11	2.691011	GGTTTTTGCTTCTGGTGGTACA	59.309	45.455	0.00	0.00	0.00	2.90
11	12	2.035449	GGGTTTTTGCTTCTGGTGGTAC	59.965	50.000	0.00	0.00	0.00	3.34
12	13	2.312390	GGGTTTTTGCTTCTGGTGGTA	58.688	47.619	0.00	0.00	0.00	3.25
13	14	1.119684	GGGTTTTTGCTTCTGGTGGT	58.880	50.000	0.00	0.00	0.00	4.16
14	15	0.392706	GGGGTTTTTGCTTCTGGTGG	59.607	55.000	0.00	0.00	0.00	4.61
15	16	1.413118	AGGGGTTTTTGCTTCTGGTG	58.587	50.000	0.00	0.00	0.00	4.17
16	17	2.174685	AAGGGGTTTTTGCTTCTGGT	57.825	45.000	0.00	0.00	0.00	4.00
17	18	4.890158	ATAAAGGGGTTTTTGCTTCTGG	57.110	40.909	0.00	0.00	0.00	3.86
18	19	7.334171	CCAATAATAAAGGGGTTTTTGCTTCTG	59.666	37.037	0.00	0.00	0.00	3.02
19	20	7.394016	CCAATAATAAAGGGGTTTTTGCTTCT	58.606	34.615	0.00	0.00	0.00	2.85
20	21	6.597672	CCCAATAATAAAGGGGTTTTTGCTTC	59.402	38.462	0.00	0.00	38.98	3.86
21	22	6.480763	CCCAATAATAAAGGGGTTTTTGCTT	58.519	36.000	0.00	0.00	38.98	3.91
22	23	6.061022	CCCAATAATAAAGGGGTTTTTGCT	57.939	37.500	0.00	0.00	38.98	3.91
53	54	9.860650	TGGCAAGACCACAACTTAATAATATAT	57.139	29.630	0.00	0.00	46.36	0.86
70	71	1.026182	TGTGCGATGATGGCAAGACC	61.026	55.000	3.06	0.00	42.92	3.85
71	72	0.097674	GTGTGCGATGATGGCAAGAC	59.902	55.000	3.06	0.46	42.92	3.01
72	73	0.321475	TGTGTGCGATGATGGCAAGA	60.321	50.000	3.06	0.00	42.92	3.02
73	74	0.522626	TTGTGTGCGATGATGGCAAG	59.477	50.000	3.06	0.00	42.92	4.01
74	75	1.132834	GATTGTGTGCGATGATGGCAA	59.867	47.619	3.06	0.00	42.92	4.52
75	76	0.734309	GATTGTGTGCGATGATGGCA	59.266	50.000	0.00	0.00	38.25	4.92
76	77	1.019673	AGATTGTGTGCGATGATGGC	58.980	50.000	0.00	0.00	0.00	4.40
77	78	1.332686	CCAGATTGTGTGCGATGATGG	59.667	52.381	0.00	0.00	0.00	3.51
78	79	2.282407	TCCAGATTGTGTGCGATGATG	58.718	47.619	0.00	0.00	0.00	3.07
79	80	2.696989	TCCAGATTGTGTGCGATGAT	57.303	45.000	0.00	0.00	0.00	2.45
80	81	2.282407	CATCCAGATTGTGTGCGATGA	58.718	47.619	0.00	0.00	30.35	2.92
81	82	1.268386	GCATCCAGATTGTGTGCGATG	60.268	52.381	0.00	0.00	0.00	3.84
82	83	1.019673	GCATCCAGATTGTGTGCGAT	58.980	50.000	0.00	0.00	0.00	4.58
83	84	1.026182	GGCATCCAGATTGTGTGCGA	61.026	55.000	0.00	0.00	36.70	5.10
84	85	1.307355	TGGCATCCAGATTGTGTGCG	61.307	55.000	0.00	0.00	36.70	5.34
85	86	0.889994	TTGGCATCCAGATTGTGTGC	59.110	50.000	0.00	0.00	33.81	4.57
86	87	3.006110	ACTTTTGGCATCCAGATTGTGTG	59.994	43.478	0.00	0.00	33.81	3.82
87	88	3.233507	ACTTTTGGCATCCAGATTGTGT	58.766	40.909	0.00	0.00	33.81	3.72
88	89	3.947910	ACTTTTGGCATCCAGATTGTG	57.052	42.857	0.00	0.00	33.81	3.33
89	90	5.539955	ACTTTACTTTTGGCATCCAGATTGT	59.460	36.000	0.00	0.00	33.81	2.71
90	91	6.029346	ACTTTACTTTTGGCATCCAGATTG	57.971	37.500	0.00	0.00	33.81	2.67
91	92	6.719370	TGTACTTTACTTTTGGCATCCAGATT	59.281	34.615	0.00	0.00	33.81	2.40
92	93	6.151144	GTGTACTTTACTTTTGGCATCCAGAT	59.849	38.462	0.00	0.00	33.81	2.90
93	94	5.472137	GTGTACTTTACTTTTGGCATCCAGA	59.528	40.000	0.00	0.00	33.81	3.86
94	95	5.240623	TGTGTACTTTACTTTTGGCATCCAG	59.759	40.000	0.00	0.00	33.81	3.86
95	96	5.133941	TGTGTACTTTACTTTTGGCATCCA	58.866	37.500	0.00	0.00	0.00	3.41
96	97	5.699097	TGTGTACTTTACTTTTGGCATCC	57.301	39.130	0.00	0.00	0.00	3.51
97	98	9.341899	CTATTTGTGTACTTTACTTTTGGCATC	57.658	33.333	0.00	0.00	0.00	3.91
98	99	7.812669	GCTATTTGTGTACTTTACTTTTGGCAT	59.187	33.333	0.00	0.00	0.00	4.40
99	100	7.013846	AGCTATTTGTGTACTTTACTTTTGGCA	59.986	33.333	0.00	0.00	0.00	4.92
100	101	7.368059	AGCTATTTGTGTACTTTACTTTTGGC	58.632	34.615	0.00	0.00	0.00	4.52
101	102	8.021396	GGAGCTATTTGTGTACTTTACTTTTGG	58.979	37.037	0.00	0.00	0.00	3.28
102	103	8.784043	AGGAGCTATTTGTGTACTTTACTTTTG	58.216	33.333	0.00	0.00	0.00	2.44
103	104	8.919777	AGGAGCTATTTGTGTACTTTACTTTT	57.080	30.769	0.00	0.00	0.00	2.27
104	105	8.919777	AAGGAGCTATTTGTGTACTTTACTTT	57.080	30.769	0.00	0.00	0.00	2.66
105	106	8.919777	AAAGGAGCTATTTGTGTACTTTACTT	57.080	30.769	0.00	0.00	0.00	2.24
112	113	9.665264	GCAATAATAAAGGAGCTATTTGTGTAC	57.335	33.333	6.64	0.00	0.00	2.90
113	114	9.627123	AGCAATAATAAAGGAGCTATTTGTGTA	57.373	29.630	6.64	0.00	0.00	2.90
114	115	8.525290	AGCAATAATAAAGGAGCTATTTGTGT	57.475	30.769	6.64	0.00	0.00	3.72
115	116	8.623903	TGAGCAATAATAAAGGAGCTATTTGTG	58.376	33.333	6.64	0.00	31.61	3.33
116	117	8.752005	TGAGCAATAATAAAGGAGCTATTTGT	57.248	30.769	6.64	0.00	31.61	2.83
117	118	9.837525	GATGAGCAATAATAAAGGAGCTATTTG	57.162	33.333	6.64	0.00	31.61	2.32
118	119	9.018582	GGATGAGCAATAATAAAGGAGCTATTT	57.981	33.333	0.00	0.00	31.61	1.40
119	120	7.335422	CGGATGAGCAATAATAAAGGAGCTATT	59.665	37.037	0.00	0.00	31.61	1.73
120	121	6.820656	CGGATGAGCAATAATAAAGGAGCTAT	59.179	38.462	0.00	0.00	31.61	2.97
121	122	6.166279	CGGATGAGCAATAATAAAGGAGCTA	58.834	40.000	0.00	0.00	31.61	3.32
122	123	4.999950	CGGATGAGCAATAATAAAGGAGCT	59.000	41.667	0.00	0.00	34.61	4.09
123	124	4.757149	ACGGATGAGCAATAATAAAGGAGC	59.243	41.667	0.00	0.00	0.00	4.70
124	125	5.409826	GGACGGATGAGCAATAATAAAGGAG	59.590	44.000	0.00	0.00	0.00	3.69
125	126	5.071788	AGGACGGATGAGCAATAATAAAGGA	59.928	40.000	0.00	0.00	0.00	3.36
126	127	5.308825	AGGACGGATGAGCAATAATAAAGG	58.691	41.667	0.00	0.00	0.00	3.11
127	128	6.867662	AAGGACGGATGAGCAATAATAAAG	57.132	37.500	0.00	0.00	0.00	1.85
128	129	6.018262	CGAAAGGACGGATGAGCAATAATAAA	60.018	38.462	0.00	0.00	0.00	1.40
129	130	5.465390	CGAAAGGACGGATGAGCAATAATAA	59.535	40.000	0.00	0.00	0.00	1.40
130	131	4.988540	CGAAAGGACGGATGAGCAATAATA	59.011	41.667	0.00	0.00	0.00	0.98
131	132	3.809832	CGAAAGGACGGATGAGCAATAAT	59.190	43.478	0.00	0.00	0.00	1.28
132	133	3.194861	CGAAAGGACGGATGAGCAATAA	58.805	45.455	0.00	0.00	0.00	1.40
133	134	2.821546	CGAAAGGACGGATGAGCAATA	58.178	47.619	0.00	0.00	0.00	1.90
134	135	1.656652	CGAAAGGACGGATGAGCAAT	58.343	50.000	0.00	0.00	0.00	3.56
135	136	1.019278	GCGAAAGGACGGATGAGCAA	61.019	55.000	0.00	0.00	0.00	3.91
136	137	1.447838	GCGAAAGGACGGATGAGCA	60.448	57.895	0.00	0.00	0.00	4.26
137	138	2.517450	CGCGAAAGGACGGATGAGC	61.517	63.158	0.00	0.00	0.00	4.26
138	139	0.867753	CTCGCGAAAGGACGGATGAG	60.868	60.000	11.33	0.00	0.00	2.90
139	140	1.138883	CTCGCGAAAGGACGGATGA	59.861	57.895	11.33	0.00	0.00	2.92
140	141	2.517450	GCTCGCGAAAGGACGGATG	61.517	63.158	11.33	0.00	0.00	3.51
141	142	2.202756	GCTCGCGAAAGGACGGAT	60.203	61.111	11.33	0.00	0.00	4.18
142	143	2.702751	TTTGCTCGCGAAAGGACGGA	62.703	55.000	11.33	0.00	0.00	4.69
143	144	2.314647	TTTGCTCGCGAAAGGACGG	61.315	57.895	11.33	0.00	0.00	4.79
144	145	1.154654	GTTTGCTCGCGAAAGGACG	60.155	57.895	11.33	0.00	0.00	4.79
145	146	1.206831	GGTTTGCTCGCGAAAGGAC	59.793	57.895	11.33	7.03	0.00	3.85
146	147	1.964373	GGGTTTGCTCGCGAAAGGA	60.964	57.895	11.33	0.00	0.00	3.36
147	148	1.912371	GAGGGTTTGCTCGCGAAAGG	61.912	60.000	11.33	0.00	0.00	3.11
148	149	1.227999	TGAGGGTTTGCTCGCGAAAG	61.228	55.000	11.33	0.00	0.00	2.62
149	150	1.227704	TGAGGGTTTGCTCGCGAAA	60.228	52.632	11.33	0.00	0.00	3.46
150	151	1.667830	CTGAGGGTTTGCTCGCGAA	60.668	57.895	11.33	0.00	0.00	4.70
151	152	2.048222	CTGAGGGTTTGCTCGCGA	60.048	61.111	9.26	9.26	0.00	5.87
152	153	3.121030	CCTGAGGGTTTGCTCGCG	61.121	66.667	0.00	0.00	0.00	5.87
153	154	2.032681	ACCTGAGGGTTTGCTCGC	59.967	61.111	2.38	0.00	44.73	5.03
154	155	1.672356	CCACCTGAGGGTTTGCTCG	60.672	63.158	2.38	0.00	44.73	5.03
155	156	1.973812	GCCACCTGAGGGTTTGCTC	60.974	63.158	2.38	0.00	44.73	4.26
156	157	2.116125	GCCACCTGAGGGTTTGCT	59.884	61.111	2.38	0.00	44.73	3.91
157	158	3.365265	CGCCACCTGAGGGTTTGC	61.365	66.667	2.38	0.00	44.73	3.68
158	159	2.672996	CCGCCACCTGAGGGTTTG	60.673	66.667	2.38	0.00	44.73	2.93
159	160	4.660938	GCCGCCACCTGAGGGTTT	62.661	66.667	2.38	0.00	44.73	3.27
199	200	3.382832	AAGGTCACGAGAGGGGCG	61.383	66.667	0.00	0.00	42.82	6.13
200	201	2.266055	CAAGGTCACGAGAGGGGC	59.734	66.667	0.00	0.00	39.46	5.80
201	202	1.592223	GTCAAGGTCACGAGAGGGG	59.408	63.158	0.00	0.00	33.12	4.79
202	203	0.900647	AGGTCAAGGTCACGAGAGGG	60.901	60.000	0.00	0.00	0.00	4.30
203	204	0.528470	GAGGTCAAGGTCACGAGAGG	59.472	60.000	0.00	0.00	0.00	3.69
204	205	0.169230	CGAGGTCAAGGTCACGAGAG	59.831	60.000	0.00	0.00	0.00	3.20
205	206	0.250597	TCGAGGTCAAGGTCACGAGA	60.251	55.000	0.00	0.00	0.00	4.04
206	207	0.169230	CTCGAGGTCAAGGTCACGAG	59.831	60.000	3.91	0.00	40.39	4.18
207	208	1.863662	GCTCGAGGTCAAGGTCACGA	61.864	60.000	15.58	0.00	0.00	4.35
208	209	1.444553	GCTCGAGGTCAAGGTCACG	60.445	63.158	15.58	0.00	0.00	4.35
209	210	0.033504	TTGCTCGAGGTCAAGGTCAC	59.966	55.000	15.58	0.00	0.00	3.67
210	211	0.033504	GTTGCTCGAGGTCAAGGTCA	59.966	55.000	15.58	0.00	0.00	4.02
211	212	0.033504	TGTTGCTCGAGGTCAAGGTC	59.966	55.000	15.58	0.33	0.00	3.85
212	213	0.034059	CTGTTGCTCGAGGTCAAGGT	59.966	55.000	15.58	0.00	0.00	3.50
213	214	0.318441	TCTGTTGCTCGAGGTCAAGG	59.682	55.000	15.58	6.90	0.00	3.61
214	215	1.707632	CTCTGTTGCTCGAGGTCAAG	58.292	55.000	15.58	0.26	0.00	3.02
215	216	0.319900	GCTCTGTTGCTCGAGGTCAA	60.320	55.000	15.58	7.99	0.00	3.18
216	217	1.290324	GCTCTGTTGCTCGAGGTCA	59.710	57.895	15.58	1.00	0.00	4.02
217	218	1.446966	GGCTCTGTTGCTCGAGGTC	60.447	63.158	15.58	0.00	0.00	3.85
218	219	1.758440	TTGGCTCTGTTGCTCGAGGT	61.758	55.000	15.58	0.00	0.00	3.85
219	220	0.392193	ATTGGCTCTGTTGCTCGAGG	60.392	55.000	15.58	0.00	0.00	4.63
220	221	1.005340	GATTGGCTCTGTTGCTCGAG	58.995	55.000	8.45	8.45	0.00	4.04
221	222	0.737367	CGATTGGCTCTGTTGCTCGA	60.737	55.000	0.00	0.00	32.39	4.04
222	223	1.016130	ACGATTGGCTCTGTTGCTCG	61.016	55.000	0.00	0.00	35.33	5.03
223	224	0.445436	CACGATTGGCTCTGTTGCTC	59.555	55.000	0.00	0.00	0.00	4.26
224	225	0.035317	TCACGATTGGCTCTGTTGCT	59.965	50.000	0.00	0.00	0.00	3.91
225	226	0.166814	GTCACGATTGGCTCTGTTGC	59.833	55.000	0.00	0.00	0.00	4.17
226	227	1.800805	AGTCACGATTGGCTCTGTTG	58.199	50.000	0.00	0.00	28.58	3.33
227	228	2.146342	CAAGTCACGATTGGCTCTGTT	58.854	47.619	0.00	0.00	36.33	3.16
228	229	1.800805	CAAGTCACGATTGGCTCTGT	58.199	50.000	0.00	0.00	36.33	3.41
229	230	0.445436	GCAAGTCACGATTGGCTCTG	59.555	55.000	0.00	0.00	36.33	3.35
230	231	0.322975	AGCAAGTCACGATTGGCTCT	59.677	50.000	0.00	0.00	36.33	4.09
231	232	1.929836	CTAGCAAGTCACGATTGGCTC	59.070	52.381	0.00	0.00	36.33	4.70
232	233	2.009042	GCTAGCAAGTCACGATTGGCT	61.009	52.381	10.63	0.00	40.39	4.75
233	234	0.375106	GCTAGCAAGTCACGATTGGC	59.625	55.000	10.63	0.00	0.00	4.52
234	235	1.929836	GAGCTAGCAAGTCACGATTGG	59.070	52.381	18.83	0.00	0.00	3.16
235	236	1.585668	CGAGCTAGCAAGTCACGATTG	59.414	52.381	18.83	0.00	0.00	2.67
236	237	1.472878	TCGAGCTAGCAAGTCACGATT	59.527	47.619	18.83	0.00	0.00	3.34
237	238	1.095600	TCGAGCTAGCAAGTCACGAT	58.904	50.000	18.83	0.00	0.00	3.73
238	239	0.168348	GTCGAGCTAGCAAGTCACGA	59.832	55.000	18.83	13.88	0.00	4.35
239	240	0.169230	AGTCGAGCTAGCAAGTCACG	59.831	55.000	18.83	11.90	0.00	4.35
240	241	1.989165	CAAGTCGAGCTAGCAAGTCAC	59.011	52.381	18.83	5.88	0.00	3.67
241	242	1.670087	GCAAGTCGAGCTAGCAAGTCA	60.670	52.381	18.83	0.00	0.00	3.41
242	243	0.995728	GCAAGTCGAGCTAGCAAGTC	59.004	55.000	18.83	4.84	0.00	3.01
243	244	0.318441	TGCAAGTCGAGCTAGCAAGT	59.682	50.000	18.83	1.74	31.42	3.16
244	245	0.997932	CTGCAAGTCGAGCTAGCAAG	59.002	55.000	18.83	10.35	34.45	4.01
245	246	3.128259	CTGCAAGTCGAGCTAGCAA	57.872	52.632	18.83	0.00	34.45	3.91
246	247	4.898002	CTGCAAGTCGAGCTAGCA	57.102	55.556	18.83	0.00	0.00	3.49
257	258	0.250234	TCCCCAATCGAGACTGCAAG	59.750	55.000	0.00	0.00	42.29	4.01
258	259	0.250234	CTCCCCAATCGAGACTGCAA	59.750	55.000	0.00	0.00	0.00	4.08
259	260	1.900351	CTCCCCAATCGAGACTGCA	59.100	57.895	0.00	0.00	0.00	4.41
260	261	1.522580	GCTCCCCAATCGAGACTGC	60.523	63.158	0.00	0.00	0.00	4.40
261	262	0.539051	AAGCTCCCCAATCGAGACTG	59.461	55.000	0.00	0.00	0.00	3.51
262	263	1.280457	AAAGCTCCCCAATCGAGACT	58.720	50.000	0.00	0.00	0.00	3.24
263	264	2.115343	AAAAGCTCCCCAATCGAGAC	57.885	50.000	0.00	0.00	0.00	3.36
264	265	3.454447	TCATAAAAGCTCCCCAATCGAGA	59.546	43.478	0.00	0.00	0.00	4.04
265	266	3.561725	GTCATAAAAGCTCCCCAATCGAG	59.438	47.826	0.00	0.00	0.00	4.04
266	267	3.541632	GTCATAAAAGCTCCCCAATCGA	58.458	45.455	0.00	0.00	0.00	3.59
267	268	2.287915	CGTCATAAAAGCTCCCCAATCG	59.712	50.000	0.00	0.00	0.00	3.34
268	269	3.279434	ACGTCATAAAAGCTCCCCAATC	58.721	45.455	0.00	0.00	0.00	2.67
269	270	3.279434	GACGTCATAAAAGCTCCCCAAT	58.721	45.455	11.55	0.00	0.00	3.16
270	271	2.706890	GACGTCATAAAAGCTCCCCAA	58.293	47.619	11.55	0.00	0.00	4.12
271	272	1.404986	CGACGTCATAAAAGCTCCCCA	60.405	52.381	17.16	0.00	0.00	4.96
272	273	1.287425	CGACGTCATAAAAGCTCCCC	58.713	55.000	17.16	0.00	0.00	4.81
273	274	0.651031	GCGACGTCATAAAAGCTCCC	59.349	55.000	17.16	0.00	0.00	4.30
274	275	1.641577	AGCGACGTCATAAAAGCTCC	58.358	50.000	17.16	0.00	0.00	4.70
275	276	2.029365	GGAAGCGACGTCATAAAAGCTC	59.971	50.000	17.16	8.58	33.42	4.09
276	277	2.000447	GGAAGCGACGTCATAAAAGCT	59.000	47.619	17.16	11.83	36.40	3.74
277	278	2.000447	AGGAAGCGACGTCATAAAAGC	59.000	47.619	17.16	9.55	0.00	3.51
278	279	4.421948	ACTAGGAAGCGACGTCATAAAAG	58.578	43.478	17.16	6.13	0.00	2.27
279	280	4.418392	GACTAGGAAGCGACGTCATAAAA	58.582	43.478	17.16	0.00	0.00	1.52
280	281	3.181493	GGACTAGGAAGCGACGTCATAAA	60.181	47.826	17.16	0.00	0.00	1.40
281	282	2.357009	GGACTAGGAAGCGACGTCATAA	59.643	50.000	17.16	0.00	0.00	1.90
282	283	1.945394	GGACTAGGAAGCGACGTCATA	59.055	52.381	17.16	0.00	0.00	2.15
283	284	0.739561	GGACTAGGAAGCGACGTCAT	59.260	55.000	17.16	0.00	0.00	3.06
284	285	0.322277	AGGACTAGGAAGCGACGTCA	60.322	55.000	17.16	0.00	0.00	4.35
285	286	0.099082	CAGGACTAGGAAGCGACGTC	59.901	60.000	5.18	5.18	0.00	4.34
286	287	0.608582	ACAGGACTAGGAAGCGACGT	60.609	55.000	0.00	0.00	0.00	4.34
287	288	0.099082	GACAGGACTAGGAAGCGACG	59.901	60.000	0.00	0.00	0.00	5.12
288	289	0.456628	GGACAGGACTAGGAAGCGAC	59.543	60.000	0.00	0.00	0.00	5.19
289	290	0.039180	TGGACAGGACTAGGAAGCGA	59.961	55.000	0.00	0.00	0.00	4.93
290	291	0.457851	CTGGACAGGACTAGGAAGCG	59.542	60.000	0.00	0.00	0.00	4.68
291	292	1.205893	CACTGGACAGGACTAGGAAGC	59.794	57.143	4.14	0.00	0.00	3.86
292	293	2.494073	GTCACTGGACAGGACTAGGAAG	59.506	54.545	4.14	0.00	43.73	3.46
293	294	2.110188	AGTCACTGGACAGGACTAGGAA	59.890	50.000	16.57	0.00	46.80	3.36
294	295	1.711375	AGTCACTGGACAGGACTAGGA	59.289	52.381	16.57	0.00	46.80	2.94
295	296	2.096248	GAGTCACTGGACAGGACTAGG	58.904	57.143	17.50	0.00	46.80	3.02
296	297	3.013921	GAGAGTCACTGGACAGGACTAG	58.986	54.545	17.50	0.00	46.80	2.57
297	298	2.291024	GGAGAGTCACTGGACAGGACTA	60.291	54.545	17.50	0.00	46.80	2.59
298	299	1.549037	GGAGAGTCACTGGACAGGACT	60.549	57.143	17.51	17.51	46.80	3.85
299	300	0.892063	GGAGAGTCACTGGACAGGAC	59.108	60.000	4.14	8.22	46.80	3.85
300	301	0.251832	GGGAGAGTCACTGGACAGGA	60.252	60.000	4.14	0.00	46.80	3.86
301	302	1.261238	GGGGAGAGTCACTGGACAGG	61.261	65.000	4.14	0.00	46.80	4.00
302	303	0.252012	AGGGGAGAGTCACTGGACAG	60.252	60.000	0.00	0.00	46.80	3.51
303	304	0.191064	AAGGGGAGAGTCACTGGACA	59.809	55.000	0.00	0.00	46.80	4.02
304	305	1.353091	AAAGGGGAGAGTCACTGGAC	58.647	55.000	0.00	0.00	44.66	4.02
305	306	1.699634	CAAAAGGGGAGAGTCACTGGA	59.300	52.381	0.00	0.00	0.00	3.86
306	307	1.421646	ACAAAAGGGGAGAGTCACTGG	59.578	52.381	0.00	0.00	0.00	4.00
307	308	2.880890	CAACAAAAGGGGAGAGTCACTG	59.119	50.000	0.00	0.00	0.00	3.66
308	309	2.749800	GCAACAAAAGGGGAGAGTCACT	60.750	50.000	0.00	0.00	0.00	3.41
309	310	1.609072	GCAACAAAAGGGGAGAGTCAC	59.391	52.381	0.00	0.00	0.00	3.67
310	311	1.478654	GGCAACAAAAGGGGAGAGTCA	60.479	52.381	0.00	0.00	0.00	3.41
311	312	1.202940	AGGCAACAAAAGGGGAGAGTC	60.203	52.381	0.00	0.00	41.41	3.36
312	313	0.853530	AGGCAACAAAAGGGGAGAGT	59.146	50.000	0.00	0.00	41.41	3.24
313	314	2.879103	TAGGCAACAAAAGGGGAGAG	57.121	50.000	0.00	0.00	41.41	3.20
314	315	2.225017	CCTTAGGCAACAAAAGGGGAGA	60.225	50.000	0.00	0.00	44.24	3.71
315	316	2.171003	CCTTAGGCAACAAAAGGGGAG	58.829	52.381	0.00	0.00	44.24	4.30
316	317	2.302587	CCTTAGGCAACAAAAGGGGA	57.697	50.000	0.00	0.00	44.24	4.81
339	340	6.385649	AGGCAACAACTATTTCGAGAAAAA	57.614	33.333	2.17	0.00	41.41	1.94
340	341	7.308348	CCTTAGGCAACAACTATTTCGAGAAAA	60.308	37.037	2.17	0.00	41.41	2.29
341	342	6.148811	CCTTAGGCAACAACTATTTCGAGAAA	59.851	38.462	0.40	0.40	41.41	2.52
342	343	5.642063	CCTTAGGCAACAACTATTTCGAGAA	59.358	40.000	0.00	0.00	41.41	2.87
343	344	5.175859	CCTTAGGCAACAACTATTTCGAGA	58.824	41.667	0.00	0.00	41.41	4.04
344	345	4.935808	ACCTTAGGCAACAACTATTTCGAG	59.064	41.667	0.00	0.00	41.41	4.04
345	346	4.901868	ACCTTAGGCAACAACTATTTCGA	58.098	39.130	0.00	0.00	41.41	3.71
346	347	5.622770	AACCTTAGGCAACAACTATTTCG	57.377	39.130	0.00	0.00	41.41	3.46
347	348	6.745116	ACAAACCTTAGGCAACAACTATTTC	58.255	36.000	0.00	0.00	41.41	2.17
348	349	6.239204	GGACAAACCTTAGGCAACAACTATTT	60.239	38.462	0.00	0.00	35.36	1.40
349	350	5.243060	GGACAAACCTTAGGCAACAACTATT	59.757	40.000	0.00	0.00	35.36	1.73
350	351	4.765339	GGACAAACCTTAGGCAACAACTAT	59.235	41.667	0.00	0.00	35.36	2.12
351	352	4.139038	GGACAAACCTTAGGCAACAACTA	58.861	43.478	0.00	0.00	35.36	2.24
352	353	2.956333	GGACAAACCTTAGGCAACAACT	59.044	45.455	0.00	0.00	35.36	3.16
353	354	3.364889	GGACAAACCTTAGGCAACAAC	57.635	47.619	0.00	0.00	35.36	3.32
376	377	0.681733	GGCATAGCTCGGATTCCTGA	59.318	55.000	0.30	0.00	0.00	3.86
377	378	0.394192	TGGCATAGCTCGGATTCCTG	59.606	55.000	0.30	0.00	0.00	3.86
385	386	4.082517	ACTGATACTACATGGCATAGCTCG	60.083	45.833	0.00	0.00	0.00	5.03
389	390	6.089249	TCACACTGATACTACATGGCATAG	57.911	41.667	0.00	0.00	0.00	2.23
408	409	4.458989	GCAAAGTGATAAGGGTGATTCACA	59.541	41.667	18.09	0.00	40.69	3.58
409	410	4.458989	TGCAAAGTGATAAGGGTGATTCAC	59.541	41.667	8.34	8.34	38.97	3.18
410	411	4.661222	TGCAAAGTGATAAGGGTGATTCA	58.339	39.130	0.00	0.00	0.00	2.57
411	412	5.357878	TGATGCAAAGTGATAAGGGTGATTC	59.642	40.000	0.00	0.00	0.00	2.52
412	413	5.263599	TGATGCAAAGTGATAAGGGTGATT	58.736	37.500	0.00	0.00	0.00	2.57
413	414	4.858850	TGATGCAAAGTGATAAGGGTGAT	58.141	39.130	0.00	0.00	0.00	3.06
414	415	4.264253	CTGATGCAAAGTGATAAGGGTGA	58.736	43.478	0.00	0.00	0.00	4.02
415	416	3.181493	GCTGATGCAAAGTGATAAGGGTG	60.181	47.826	0.00	0.00	39.41	4.61
460	461	7.822334	ACGACACATCATTTTAGTGGAGAAATA	59.178	33.333	0.00	0.00	37.58	1.40
479	480	2.092592	TCCCTAGCTATGAGACGACACA	60.093	50.000	0.00	0.00	0.00	3.72
488	489	3.791320	CAACCCCTATCCCTAGCTATGA	58.209	50.000	0.00	0.00	0.00	2.15
494	495	0.763223	ACGGCAACCCCTATCCCTAG	60.763	60.000	0.00	0.00	0.00	3.02
495	496	0.761702	GACGGCAACCCCTATCCCTA	60.762	60.000	0.00	0.00	0.00	3.53
496	497	2.042261	ACGGCAACCCCTATCCCT	59.958	61.111	0.00	0.00	0.00	4.20
497	498	2.509422	GACGGCAACCCCTATCCC	59.491	66.667	0.00	0.00	0.00	3.85
498	499	2.509422	GGACGGCAACCCCTATCC	59.491	66.667	0.00	0.00	31.59	2.59
499	500	2.325393	CTGGGACGGCAACCCCTATC	62.325	65.000	12.44	0.00	46.21	2.08
500	501	2.285818	TGGGACGGCAACCCCTAT	60.286	61.111	12.44	0.00	46.21	2.57
501	502	3.006728	CTGGGACGGCAACCCCTA	61.007	66.667	12.44	0.00	46.21	3.53
506	507	2.040544	CATCACCTGGGACGGCAAC	61.041	63.158	0.00	0.00	0.00	4.17
517	518	3.503748	GCACTTGAAAACTAGCATCACCT	59.496	43.478	0.00	0.00	0.00	4.00
520	521	4.645535	AGAGCACTTGAAAACTAGCATCA	58.354	39.130	0.00	0.00	0.00	3.07
526	527	5.176958	GCTAAACGAGAGCACTTGAAAACTA	59.823	40.000	5.29	0.00	39.84	2.24
527	528	4.024809	GCTAAACGAGAGCACTTGAAAACT	60.025	41.667	5.29	0.00	39.84	2.66
528	529	4.024809	AGCTAAACGAGAGCACTTGAAAAC	60.025	41.667	5.29	0.00	42.69	2.43
532	533	3.386768	AAGCTAAACGAGAGCACTTGA	57.613	42.857	5.29	0.00	42.69	3.02
536	537	2.544267	ACACAAAGCTAAACGAGAGCAC	59.456	45.455	9.86	0.00	42.69	4.40
537	538	2.543848	CACACAAAGCTAAACGAGAGCA	59.456	45.455	9.86	0.00	42.69	4.26
543	544	2.755836	AGCACACACAAAGCTAAACG	57.244	45.000	0.00	0.00	36.73	3.60
546	547	6.406370	ACAGATATAGCACACACAAAGCTAA	58.594	36.000	0.00	0.00	43.32	3.09
547	548	5.977635	ACAGATATAGCACACACAAAGCTA	58.022	37.500	0.00	0.00	44.10	3.32
551	552	5.240403	TGCAAACAGATATAGCACACACAAA	59.760	36.000	0.00	0.00	0.00	2.83
552	553	4.759183	TGCAAACAGATATAGCACACACAA	59.241	37.500	0.00	0.00	0.00	3.33
554	555	4.944962	TGCAAACAGATATAGCACACAC	57.055	40.909	0.00	0.00	0.00	3.82
555	556	7.307337	CGATAATGCAAACAGATATAGCACACA	60.307	37.037	0.00	0.00	38.12	3.72
556	557	7.011773	CGATAATGCAAACAGATATAGCACAC	58.988	38.462	0.00	0.00	38.12	3.82
565	572	4.201950	GCTCAACCGATAATGCAAACAGAT	60.202	41.667	0.00	0.00	0.00	2.90
594	606	2.345760	CCAGCATCAACACCTGGCC	61.346	63.158	0.00	0.00	39.64	5.36
596	608	0.037303	AGTCCAGCATCAACACCTGG	59.963	55.000	0.00	0.00	45.88	4.45
598	610	0.767375	ACAGTCCAGCATCAACACCT	59.233	50.000	0.00	0.00	0.00	4.00
606	618	4.410225	CTGCCAACAGTCCAGCAT	57.590	55.556	0.00	0.00	39.22	3.79
626	638	2.725723	CGAAATGTGTTCATGCACCAAC	59.274	45.455	0.00	0.00	38.52	3.77
652	664	1.403089	AATTCCCCTTCCCATCCCAA	58.597	50.000	0.00	0.00	0.00	4.12
654	666	3.923273	ATTAATTCCCCTTCCCATCCC	57.077	47.619	0.00	0.00	0.00	3.85
655	667	6.787458	ACATTAATTAATTCCCCTTCCCATCC	59.213	38.462	8.01	0.00	0.00	3.51
656	668	7.855784	ACATTAATTAATTCCCCTTCCCATC	57.144	36.000	8.01	0.00	0.00	3.51
657	669	7.627293	ACAACATTAATTAATTCCCCTTCCCAT	59.373	33.333	8.01	0.00	0.00	4.00
658	670	6.962902	ACAACATTAATTAATTCCCCTTCCCA	59.037	34.615	8.01	0.00	0.00	4.37
662	674	9.100197	AGTTGACAACATTAATTAATTCCCCTT	57.900	29.630	20.08	0.00	0.00	3.95
677	689	8.641541	ACATTAAATCAGGAAAGTTGACAACAT	58.358	29.630	20.08	5.61	0.00	2.71
702	718	7.592938	TGATCTTGACAACAATGGTAATTCAC	58.407	34.615	0.00	0.00	35.37	3.18
710	727	8.815141	TTGTTAATTGATCTTGACAACAATGG	57.185	30.769	3.93	0.00	31.88	3.16
756	773	8.257306	GCATTAACTAAAATTGATTCCCCTCAA	58.743	33.333	0.00	0.00	39.35	3.02
757	774	7.398618	TGCATTAACTAAAATTGATTCCCCTCA	59.601	33.333	0.00	0.00	0.00	3.86
758	775	7.781056	TGCATTAACTAAAATTGATTCCCCTC	58.219	34.615	0.00	0.00	0.00	4.30
759	776	7.732222	TGCATTAACTAAAATTGATTCCCCT	57.268	32.000	0.00	0.00	0.00	4.79
760	777	8.962884	ATTGCATTAACTAAAATTGATTCCCC	57.037	30.769	0.00	0.00	0.00	4.81
855	872	9.586435	CCAAATTCTCCTTATTTTTAGCGATTT	57.414	29.630	0.00	0.00	0.00	2.17
856	873	7.706607	GCCAAATTCTCCTTATTTTTAGCGATT	59.293	33.333	0.00	0.00	0.00	3.34
857	874	7.203218	GCCAAATTCTCCTTATTTTTAGCGAT	58.797	34.615	0.00	0.00	0.00	4.58
858	875	6.405397	GGCCAAATTCTCCTTATTTTTAGCGA	60.405	38.462	0.00	0.00	0.00	4.93
859	876	5.748630	GGCCAAATTCTCCTTATTTTTAGCG	59.251	40.000	0.00	0.00	0.00	4.26
860	877	6.639563	TGGCCAAATTCTCCTTATTTTTAGC	58.360	36.000	0.61	0.00	0.00	3.09
861	878	7.649306	CGATGGCCAAATTCTCCTTATTTTTAG	59.351	37.037	10.96	0.00	0.00	1.85
862	879	7.123547	ACGATGGCCAAATTCTCCTTATTTTTA	59.876	33.333	10.96	0.00	0.00	1.52
863	880	6.070824	ACGATGGCCAAATTCTCCTTATTTTT	60.071	34.615	10.96	0.00	0.00	1.94
864	881	5.422012	ACGATGGCCAAATTCTCCTTATTTT	59.578	36.000	10.96	0.00	0.00	1.82
865	882	4.956075	ACGATGGCCAAATTCTCCTTATTT	59.044	37.500	10.96	0.00	0.00	1.40
866	883	4.339247	CACGATGGCCAAATTCTCCTTATT	59.661	41.667	10.96	0.00	0.00	1.40
867	884	3.885297	CACGATGGCCAAATTCTCCTTAT	59.115	43.478	10.96	0.00	0.00	1.73
868	885	3.054728	TCACGATGGCCAAATTCTCCTTA	60.055	43.478	10.96	0.00	0.00	2.69
869	886	2.094675	CACGATGGCCAAATTCTCCTT	58.905	47.619	10.96	0.00	0.00	3.36
870	887	1.281867	TCACGATGGCCAAATTCTCCT	59.718	47.619	10.96	0.00	0.00	3.69
871	888	1.750193	TCACGATGGCCAAATTCTCC	58.250	50.000	10.96	0.00	0.00	3.71
872	889	4.023707	CCTAATCACGATGGCCAAATTCTC	60.024	45.833	10.96	0.07	0.00	2.87
873	890	3.885297	CCTAATCACGATGGCCAAATTCT	59.115	43.478	10.96	0.00	0.00	2.40
874	891	3.004734	CCCTAATCACGATGGCCAAATTC	59.995	47.826	10.96	1.01	0.00	2.17
875	892	2.958355	CCCTAATCACGATGGCCAAATT	59.042	45.455	10.96	7.67	0.00	1.82
876	893	2.091885	ACCCTAATCACGATGGCCAAAT	60.092	45.455	10.96	0.00	0.00	2.32
877	894	1.283613	ACCCTAATCACGATGGCCAAA	59.716	47.619	10.96	0.00	0.00	3.28
878	895	0.916086	ACCCTAATCACGATGGCCAA	59.084	50.000	10.96	0.00	0.00	4.52
879	896	0.468226	GACCCTAATCACGATGGCCA	59.532	55.000	8.56	8.56	0.00	5.36
880	897	0.600255	CGACCCTAATCACGATGGCC	60.600	60.000	0.00	0.00	0.00	5.36
881	898	1.222115	GCGACCCTAATCACGATGGC	61.222	60.000	0.00	0.00	0.00	4.40
882	899	0.389391	AGCGACCCTAATCACGATGG	59.611	55.000	0.00	0.00	0.00	3.51
883	900	1.772182	GAGCGACCCTAATCACGATG	58.228	55.000	0.00	0.00	0.00	3.84
884	901	0.311165	CGAGCGACCCTAATCACGAT	59.689	55.000	0.00	0.00	0.00	3.73
885	902	1.028330	ACGAGCGACCCTAATCACGA	61.028	55.000	0.00	0.00	0.00	4.35
886	903	0.179145	AACGAGCGACCCTAATCACG	60.179	55.000	0.00	0.00	0.00	4.35
887	904	2.005971	AAACGAGCGACCCTAATCAC	57.994	50.000	0.00	0.00	0.00	3.06
888	905	2.754946	AAAACGAGCGACCCTAATCA	57.245	45.000	0.00	0.00	0.00	2.57
919	936	9.635404	CCAATTATAACCACCTTATTCCACTAA	57.365	33.333	0.00	0.00	0.00	2.24
920	937	7.722285	GCCAATTATAACCACCTTATTCCACTA	59.278	37.037	0.00	0.00	0.00	2.74
921	938	6.549736	GCCAATTATAACCACCTTATTCCACT	59.450	38.462	0.00	0.00	0.00	4.00
922	939	6.322712	TGCCAATTATAACCACCTTATTCCAC	59.677	38.462	0.00	0.00	0.00	4.02
923	940	6.436027	TGCCAATTATAACCACCTTATTCCA	58.564	36.000	0.00	0.00	0.00	3.53
924	941	6.969993	TGCCAATTATAACCACCTTATTCC	57.030	37.500	0.00	0.00	0.00	3.01
925	942	9.260002	CATTTGCCAATTATAACCACCTTATTC	57.740	33.333	0.00	0.00	0.00	1.75
926	943	8.210265	CCATTTGCCAATTATAACCACCTTATT	58.790	33.333	0.00	0.00	0.00	1.40
927	944	7.346960	ACCATTTGCCAATTATAACCACCTTAT	59.653	33.333	0.00	0.00	0.00	1.73
928	945	6.670027	ACCATTTGCCAATTATAACCACCTTA	59.330	34.615	0.00	0.00	0.00	2.69
929	946	5.487131	ACCATTTGCCAATTATAACCACCTT	59.513	36.000	0.00	0.00	0.00	3.50
930	947	5.029474	ACCATTTGCCAATTATAACCACCT	58.971	37.500	0.00	0.00	0.00	4.00
931	948	5.115480	CACCATTTGCCAATTATAACCACC	58.885	41.667	0.00	0.00	0.00	4.61
932	949	5.115480	CCACCATTTGCCAATTATAACCAC	58.885	41.667	0.00	0.00	0.00	4.16
933	950	4.780021	ACCACCATTTGCCAATTATAACCA	59.220	37.500	0.00	0.00	0.00	3.67
934	951	5.351948	ACCACCATTTGCCAATTATAACC	57.648	39.130	0.00	0.00	0.00	2.85
935	952	7.680442	AAAACCACCATTTGCCAATTATAAC	57.320	32.000	0.00	0.00	0.00	1.89
936	953	8.375506	TGTAAAACCACCATTTGCCAATTATAA	58.624	29.630	0.00	0.00	0.00	0.98
937	954	7.907389	TGTAAAACCACCATTTGCCAATTATA	58.093	30.769	0.00	0.00	0.00	0.98
938	955	6.773638	TGTAAAACCACCATTTGCCAATTAT	58.226	32.000	0.00	0.00	0.00	1.28
939	956	6.174720	TGTAAAACCACCATTTGCCAATTA	57.825	33.333	0.00	0.00	0.00	1.40
940	957	5.041191	TGTAAAACCACCATTTGCCAATT	57.959	34.783	0.00	0.00	0.00	2.32
941	958	4.102367	ACTGTAAAACCACCATTTGCCAAT	59.898	37.500	0.00	0.00	0.00	3.16
942	959	3.452627	ACTGTAAAACCACCATTTGCCAA	59.547	39.130	0.00	0.00	0.00	4.52
943	960	3.034635	ACTGTAAAACCACCATTTGCCA	58.965	40.909	0.00	0.00	0.00	4.92
944	961	3.744238	ACTGTAAAACCACCATTTGCC	57.256	42.857	0.00	0.00	0.00	4.52
945	962	4.234574	GCTACTGTAAAACCACCATTTGC	58.765	43.478	0.00	0.00	0.00	3.68
946	963	5.446143	TGCTACTGTAAAACCACCATTTG	57.554	39.130	0.00	0.00	0.00	2.32
947	964	4.022329	GCTGCTACTGTAAAACCACCATTT	60.022	41.667	0.00	0.00	0.00	2.32
948	965	3.506067	GCTGCTACTGTAAAACCACCATT	59.494	43.478	0.00	0.00	0.00	3.16
949	966	3.081804	GCTGCTACTGTAAAACCACCAT	58.918	45.455	0.00	0.00	0.00	3.55
950	967	2.158740	TGCTGCTACTGTAAAACCACCA	60.159	45.455	0.00	0.00	0.00	4.17
951	968	2.484264	CTGCTGCTACTGTAAAACCACC	59.516	50.000	0.00	0.00	0.00	4.61
952	969	3.399330	TCTGCTGCTACTGTAAAACCAC	58.601	45.455	0.00	0.00	0.00	4.16
953	970	3.762407	TCTGCTGCTACTGTAAAACCA	57.238	42.857	0.00	0.00	0.00	3.67
954	971	3.623510	GGATCTGCTGCTACTGTAAAACC	59.376	47.826	0.00	0.00	0.00	3.27
955	972	3.623510	GGGATCTGCTGCTACTGTAAAAC	59.376	47.826	0.00	0.00	0.00	2.43
956	973	3.678806	CGGGATCTGCTGCTACTGTAAAA	60.679	47.826	0.00	0.00	0.00	1.52
957	974	2.159099	CGGGATCTGCTGCTACTGTAAA	60.159	50.000	0.00	0.00	0.00	2.01
958	975	1.409064	CGGGATCTGCTGCTACTGTAA	59.591	52.381	0.00	0.00	0.00	2.41
959	976	1.032794	CGGGATCTGCTGCTACTGTA	58.967	55.000	0.00	0.00	0.00	2.74
960	977	1.680522	CCGGGATCTGCTGCTACTGT	61.681	60.000	0.00	0.00	0.00	3.55
961	978	1.068753	CCGGGATCTGCTGCTACTG	59.931	63.158	0.00	0.00	0.00	2.74
962	979	1.381872	ACCGGGATCTGCTGCTACT	60.382	57.895	6.32	0.00	0.00	2.57
963	980	1.068250	GACCGGGATCTGCTGCTAC	59.932	63.158	6.32	0.00	0.00	3.58
964	981	2.134287	GGACCGGGATCTGCTGCTA	61.134	63.158	6.32	0.00	0.00	3.49
965	982	3.474570	GGACCGGGATCTGCTGCT	61.475	66.667	6.32	0.00	0.00	4.24
966	983	3.453070	GAGGACCGGGATCTGCTGC	62.453	68.421	6.32	0.00	0.00	5.25
967	984	2.801631	GGAGGACCGGGATCTGCTG	61.802	68.421	6.32	0.00	0.00	4.41
968	985	2.444895	GGAGGACCGGGATCTGCT	60.445	66.667	6.32	0.00	0.00	4.24
991	1008	3.762247	CTGCGCCATTGGGTTGGG	61.762	66.667	4.18	0.00	37.24	4.12
992	1009	4.440127	GCTGCGCCATTGGGTTGG	62.440	66.667	4.18	0.00	39.94	3.77
1023	1040	4.040445	GAAGATCTCTTCCAGGAGTTCG	57.960	50.000	8.47	0.00	44.93	3.95
1035	1052	0.469144	GGAGGCGGAGGAAGATCTCT	60.469	60.000	0.00	0.00	34.39	3.10
1135	1152	2.722201	GGTGGAGGACGCGGAATCT	61.722	63.158	12.47	1.20	0.00	2.40
1448	1494	2.370647	GACCTGGTCGGCTAGATGGC	62.371	65.000	11.71	0.00	35.61	4.40
1475	1521	2.212900	CTCGCACTCCACGATGTCCA	62.213	60.000	0.00	0.00	39.12	4.02
1635	1684	1.942223	GCGCCCAAACACGTCAAAC	60.942	57.895	0.00	0.00	0.00	2.93
1857	1939	7.103641	ACAAGAGATGATATACACCACGTTTT	58.896	34.615	0.00	0.00	0.00	2.43
2017	2126	8.492415	AAATAGTCTACTGTTGGCCTATCATA	57.508	34.615	3.32	0.00	0.00	2.15
2064	2173	4.021016	GTCTGACAGAACCATTCTACCTGT	60.021	45.833	6.76	0.00	38.11	4.00
2070	2179	2.975489	ACCAGTCTGACAGAACCATTCT	59.025	45.455	6.76	0.00	41.70	2.40
2263	2396	1.698506	TTCAGGGTCGTTTGGCAAAT	58.301	45.000	16.74	0.00	0.00	2.32
2275	2409	3.956199	CCATGTCAGCATTAATTCAGGGT	59.044	43.478	0.00	0.00	31.99	4.34
2276	2410	3.243636	GCCATGTCAGCATTAATTCAGGG	60.244	47.826	0.00	0.00	31.99	4.45
2335	2481	9.573133	AACTAAATAACAACAAGCAATATGAGC	57.427	29.630	0.00	0.00	0.00	4.26
2504	2664	9.149225	GCAAATACACATATCCAAATTCACAAA	57.851	29.630	0.00	0.00	0.00	2.83
2790	2998	7.818997	AGAATTCATTAGACATGATGCACAT	57.181	32.000	8.44	0.00	40.17	3.21
2841	3049	2.045634	TCATGCACCCTCAGCTGC	60.046	61.111	9.47	0.00	0.00	5.25
2872	3080	5.471456	ACAATGCCAACAGACAAAACAAAAA	59.529	32.000	0.00	0.00	0.00	1.94
2878	3086	3.430098	GGTGACAATGCCAACAGACAAAA	60.430	43.478	0.00	0.00	0.00	2.44
2909	3119	2.489329	CACCTAAAATGGCACCAGACAG	59.511	50.000	0.00	0.00	35.18	3.51
2969	3179	6.083630	ACACATAAATTTGAACATTCGACCG	58.916	36.000	0.00	0.00	0.00	4.79
3039	3249	6.694411	CCTAATTTAGCAACATCATGAGCAAC	59.306	38.462	0.09	0.00	0.00	4.17
3101	3313	6.882140	ACAGATTGGGTCATTACGATTTACAA	59.118	34.615	0.00	0.00	0.00	2.41
3102	3314	6.411376	ACAGATTGGGTCATTACGATTTACA	58.589	36.000	0.00	0.00	0.00	2.41
3103	3315	6.920569	ACAGATTGGGTCATTACGATTTAC	57.079	37.500	0.00	0.00	0.00	2.01
3104	3316	9.621629	AATTACAGATTGGGTCATTACGATTTA	57.378	29.630	0.00	0.00	0.00	1.40
3105	3317	8.519799	AATTACAGATTGGGTCATTACGATTT	57.480	30.769	0.00	0.00	0.00	2.17
3106	3318	9.793259	ATAATTACAGATTGGGTCATTACGATT	57.207	29.630	0.00	0.00	0.00	3.34
3107	3319	9.219603	CATAATTACAGATTGGGTCATTACGAT	57.780	33.333	0.00	0.00	0.00	3.73

Based at the University of Bristol with support from BBSRC.

AutoCloner maintained by Alex Coulton.