Multiple sequence alignment - TraesCS4A01G422500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G422500 chr4A 100.000 2279 0 0 1 2279 692656758 692654480 0.000000e+00 4209.0
1 TraesCS4A01G422500 chr4A 94.709 378 17 2 1607 1983 472930474 472930099 3.260000e-163 584.0
2 TraesCS4A01G422500 chr4A 87.919 447 26 7 688 1133 472931328 472930909 3.380000e-138 501.0
3 TraesCS4A01G422500 chr4A 92.593 216 16 0 2064 2279 472930101 472929886 6.110000e-81 311.0
4 TraesCS4A01G422500 chr5B 95.234 1154 47 4 1129 2279 592813789 592812641 0.000000e+00 1820.0
5 TraesCS4A01G422500 chr5B 91.986 1173 78 8 729 1889 381071620 381072788 0.000000e+00 1631.0
6 TraesCS4A01G422500 chr5B 91.898 469 36 2 652 1119 592814541 592814074 0.000000e+00 654.0
7 TraesCS4A01G422500 chr5B 86.207 493 36 7 1786 2278 381072779 381073239 2.610000e-139 505.0
8 TraesCS4A01G422500 chr5B 84.158 101 14 2 652 751 648850524 648850623 1.860000e-16 97.1
9 TraesCS4A01G422500 chr7A 86.480 1642 161 42 657 2278 364002093 364003693 0.000000e+00 1746.0
10 TraesCS4A01G422500 chr7A 88.618 246 17 3 1 245 32953381 32953146 2.860000e-74 289.0
11 TraesCS4A01G422500 chr7A 89.231 65 3 4 652 714 125595383 125595321 6.750000e-11 78.7
12 TraesCS4A01G422500 chr5A 93.083 1012 62 5 977 1983 8125339 8126347 0.000000e+00 1474.0
13 TraesCS4A01G422500 chr5A 92.120 368 24 5 652 1016 8125040 8125405 4.340000e-142 514.0
14 TraesCS4A01G422500 chr5A 92.593 216 16 0 2064 2279 8126345 8126560 6.110000e-81 311.0
15 TraesCS4A01G422500 chr3A 91.223 1014 73 10 977 1983 16468237 16467233 0.000000e+00 1365.0
16 TraesCS4A01G422500 chr3A 90.489 368 29 6 652 1016 16468536 16468172 4.400000e-132 481.0
17 TraesCS4A01G422500 chr3A 92.593 216 16 0 2064 2279 16467235 16467020 6.110000e-81 311.0
18 TraesCS4A01G422500 chr3B 89.416 548 44 5 1316 1862 62599741 62599207 0.000000e+00 678.0
19 TraesCS4A01G422500 chr3B 79.218 409 73 10 1161 1560 548055496 548055901 8.020000e-70 274.0
20 TraesCS4A01G422500 chr3B 77.524 307 50 19 652 947 732145508 732145806 1.400000e-37 167.0
21 TraesCS4A01G422500 chr3B 82.955 88 9 6 536 618 793348232 793348318 8.730000e-10 75.0
22 TraesCS4A01G422500 chr6B 82.553 705 86 20 726 1413 12665120 12664436 9.070000e-164 586.0
23 TraesCS4A01G422500 chr6B 81.988 161 26 2 652 811 697689880 697689722 1.420000e-27 134.0
24 TraesCS4A01G422500 chr2D 88.136 413 46 2 1 410 593219571 593219983 2.630000e-134 488.0
25 TraesCS4A01G422500 chr2D 75.410 305 57 17 654 947 91143547 91143844 5.110000e-27 132.0
26 TraesCS4A01G422500 chr2A 87.685 406 47 2 1 403 727957750 727958155 9.530000e-129 470.0
27 TraesCS4A01G422500 chr2A 78.973 409 74 8 1161 1560 642972458 642972053 3.730000e-68 268.0
28 TraesCS4A01G422500 chr2B 86.199 413 54 2 1 410 719473264 719473676 5.780000e-121 444.0
29 TraesCS4A01G422500 chr7B 88.235 170 13 5 1750 1916 246025497 246025662 1.790000e-46 196.0
30 TraesCS4A01G422500 chr1D 90.244 82 6 2 1004 1085 23444123 23444202 3.100000e-19 106.0
31 TraesCS4A01G422500 chr1D 85.294 68 9 1 554 620 443741856 443741923 4.060000e-08 69.4
32 TraesCS4A01G422500 chr1B 85.227 88 10 3 525 610 142518011 142517925 1.120000e-13 87.9
33 TraesCS4A01G422500 chr4D 94.545 55 3 0 683 737 12042057 12042003 4.030000e-13 86.1
34 TraesCS4A01G422500 chr1A 83.168 101 9 3 1560 1658 533687209 533687303 4.030000e-13 86.1
35 TraesCS4A01G422500 chr5D 97.561 41 1 0 1988 2028 553219511 553219471 1.130000e-08 71.3
36 TraesCS4A01G422500 chr5D 97.561 41 1 0 1988 2028 553253833 553253793 1.130000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G422500 chr4A 692654480 692656758 2278 True 4209.000000 4209 100.000000 1 2279 1 chr4A.!!$R1 2278
1 TraesCS4A01G422500 chr4A 472929886 472931328 1442 True 465.333333 584 91.740333 688 2279 3 chr4A.!!$R2 1591
2 TraesCS4A01G422500 chr5B 592812641 592814541 1900 True 1237.000000 1820 93.566000 652 2279 2 chr5B.!!$R1 1627
3 TraesCS4A01G422500 chr5B 381071620 381073239 1619 False 1068.000000 1631 89.096500 729 2278 2 chr5B.!!$F2 1549
4 TraesCS4A01G422500 chr7A 364002093 364003693 1600 False 1746.000000 1746 86.480000 657 2278 1 chr7A.!!$F1 1621
5 TraesCS4A01G422500 chr5A 8125040 8126560 1520 False 766.333333 1474 92.598667 652 2279 3 chr5A.!!$F1 1627
6 TraesCS4A01G422500 chr3A 16467020 16468536 1516 True 719.000000 1365 91.435000 652 2279 3 chr3A.!!$R1 1627
7 TraesCS4A01G422500 chr3B 62599207 62599741 534 True 678.000000 678 89.416000 1316 1862 1 chr3B.!!$R1 546
8 TraesCS4A01G422500 chr6B 12664436 12665120 684 True 586.000000 586 82.553000 726 1413 1 chr6B.!!$R1 687

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
128 129 0.030235 CATGCGGATGACATTGCCAG 59.97 55.0 12.09 1.33 0.0 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1597 1994 0.179192 GCACACACACACACACACTG 60.179 55.0 0.0 0.0 0.0 3.66 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.068881 ACTCCATCGTGGTGGTGG 58.931 61.111 6.22 0.82 39.03 4.61
18 19 2.436646 CTCCATCGTGGTGGTGGC 60.437 66.667 0.00 0.00 39.03 5.01
19 20 4.386951 TCCATCGTGGTGGTGGCG 62.387 66.667 0.00 0.00 39.03 5.69
20 21 4.697756 CCATCGTGGTGGTGGCGT 62.698 66.667 0.00 0.00 34.46 5.68
21 22 2.668212 CATCGTGGTGGTGGCGTT 60.668 61.111 0.00 0.00 0.00 4.84
22 23 2.358247 ATCGTGGTGGTGGCGTTC 60.358 61.111 0.00 0.00 0.00 3.95
23 24 3.894547 ATCGTGGTGGTGGCGTTCC 62.895 63.158 0.00 0.00 0.00 3.62
24 25 4.619227 CGTGGTGGTGGCGTTCCT 62.619 66.667 0.00 0.00 0.00 3.36
25 26 2.668550 GTGGTGGTGGCGTTCCTC 60.669 66.667 0.00 0.00 0.00 3.71
26 27 4.308458 TGGTGGTGGCGTTCCTCG 62.308 66.667 0.00 0.00 43.12 4.63
36 37 4.467084 GTTCCTCGCGGCCATCCA 62.467 66.667 6.13 0.00 0.00 3.41
37 38 3.711814 TTCCTCGCGGCCATCCAA 61.712 61.111 6.13 0.00 0.00 3.53
38 39 3.969250 TTCCTCGCGGCCATCCAAC 62.969 63.158 6.13 0.00 0.00 3.77
39 40 4.473520 CCTCGCGGCCATCCAACT 62.474 66.667 6.13 0.00 0.00 3.16
40 41 2.499205 CTCGCGGCCATCCAACTA 59.501 61.111 6.13 0.00 0.00 2.24
41 42 1.592669 CTCGCGGCCATCCAACTAG 60.593 63.158 6.13 0.00 0.00 2.57
42 43 2.186903 CGCGGCCATCCAACTAGT 59.813 61.111 2.24 0.00 0.00 2.57
43 44 1.883084 CGCGGCCATCCAACTAGTC 60.883 63.158 2.24 0.00 0.00 2.59
44 45 1.220749 GCGGCCATCCAACTAGTCA 59.779 57.895 2.24 0.00 0.00 3.41
45 46 0.179045 GCGGCCATCCAACTAGTCAT 60.179 55.000 2.24 0.00 0.00 3.06
46 47 1.871080 CGGCCATCCAACTAGTCATC 58.129 55.000 2.24 0.00 0.00 2.92
47 48 1.541233 CGGCCATCCAACTAGTCATCC 60.541 57.143 2.24 0.00 0.00 3.51
48 49 1.771255 GGCCATCCAACTAGTCATCCT 59.229 52.381 0.00 0.00 0.00 3.24
49 50 2.486191 GGCCATCCAACTAGTCATCCTG 60.486 54.545 0.00 0.00 0.00 3.86
50 51 2.843701 CCATCCAACTAGTCATCCTGC 58.156 52.381 0.00 0.00 0.00 4.85
51 52 2.437281 CCATCCAACTAGTCATCCTGCT 59.563 50.000 0.00 0.00 0.00 4.24
52 53 3.494048 CCATCCAACTAGTCATCCTGCTC 60.494 52.174 0.00 0.00 0.00 4.26
53 54 1.751351 TCCAACTAGTCATCCTGCTCG 59.249 52.381 0.00 0.00 0.00 5.03
54 55 1.565305 CAACTAGTCATCCTGCTCGC 58.435 55.000 0.00 0.00 0.00 5.03
55 56 1.134995 CAACTAGTCATCCTGCTCGCA 60.135 52.381 0.00 0.00 0.00 5.10
56 57 0.457851 ACTAGTCATCCTGCTCGCAC 59.542 55.000 0.00 0.00 0.00 5.34
57 58 0.249238 CTAGTCATCCTGCTCGCACC 60.249 60.000 0.00 0.00 0.00 5.01
58 59 2.004808 TAGTCATCCTGCTCGCACCG 62.005 60.000 0.00 0.00 0.00 4.94
59 60 3.381983 TCATCCTGCTCGCACCGT 61.382 61.111 0.00 0.00 0.00 4.83
60 61 3.190849 CATCCTGCTCGCACCGTG 61.191 66.667 0.00 0.00 0.00 4.94
61 62 3.695606 ATCCTGCTCGCACCGTGT 61.696 61.111 0.00 0.00 0.00 4.49
62 63 3.939837 ATCCTGCTCGCACCGTGTG 62.940 63.158 5.68 5.68 36.51 3.82
124 125 4.601315 CGCATGCGGATGACATTG 57.399 55.556 31.99 0.00 35.56 2.82
125 126 1.656263 CGCATGCGGATGACATTGC 60.656 57.895 31.99 4.28 35.56 3.56
126 127 1.299620 GCATGCGGATGACATTGCC 60.300 57.895 22.14 0.00 0.00 4.52
127 128 2.007113 GCATGCGGATGACATTGCCA 62.007 55.000 22.14 0.00 0.00 4.92
128 129 0.030235 CATGCGGATGACATTGCCAG 59.970 55.000 12.09 1.33 0.00 4.85
129 130 1.105167 ATGCGGATGACATTGCCAGG 61.105 55.000 10.12 0.00 0.00 4.45
130 131 1.750399 GCGGATGACATTGCCAGGT 60.750 57.895 2.98 0.00 0.00 4.00
131 132 1.996786 GCGGATGACATTGCCAGGTG 61.997 60.000 2.98 0.00 0.00 4.00
132 133 1.378882 CGGATGACATTGCCAGGTGG 61.379 60.000 0.00 0.00 38.53 4.61
133 134 0.034186 GGATGACATTGCCAGGTGGA 60.034 55.000 0.00 0.00 37.39 4.02
134 135 1.616725 GGATGACATTGCCAGGTGGAA 60.617 52.381 0.00 0.00 37.39 3.53
135 136 1.747355 GATGACATTGCCAGGTGGAAG 59.253 52.381 0.00 0.00 37.39 3.46
136 137 0.895100 TGACATTGCCAGGTGGAAGC 60.895 55.000 0.00 0.00 37.39 3.86
138 139 0.610232 ACATTGCCAGGTGGAAGCTC 60.610 55.000 0.00 0.00 44.61 4.09
139 140 1.377725 ATTGCCAGGTGGAAGCTCG 60.378 57.895 0.00 0.00 44.61 5.03
140 141 2.129555 ATTGCCAGGTGGAAGCTCGT 62.130 55.000 0.00 0.00 44.61 4.18
141 142 2.743928 GCCAGGTGGAAGCTCGTG 60.744 66.667 0.00 0.00 44.61 4.35
142 143 2.046892 CCAGGTGGAAGCTCGTGG 60.047 66.667 0.00 0.00 44.61 4.94
143 144 2.743928 CAGGTGGAAGCTCGTGGC 60.744 66.667 0.00 0.00 44.61 5.01
144 145 4.021925 AGGTGGAAGCTCGTGGCC 62.022 66.667 0.00 0.00 44.61 5.36
162 163 4.547367 GGGGATGCGTTCCGGGAG 62.547 72.222 0.00 0.00 46.52 4.30
177 178 4.729918 GAGCCCAGCCACCCAGTG 62.730 72.222 0.00 0.00 0.00 3.66
180 181 4.729918 CCCAGCCACCCAGTGCTC 62.730 72.222 0.00 0.00 31.34 4.26
181 182 4.729918 CCAGCCACCCAGTGCTCC 62.730 72.222 0.00 0.00 31.34 4.70
182 183 3.644606 CAGCCACCCAGTGCTCCT 61.645 66.667 0.00 0.00 31.34 3.69
183 184 3.644606 AGCCACCCAGTGCTCCTG 61.645 66.667 0.00 0.00 41.15 3.86
184 185 3.958860 GCCACCCAGTGCTCCTGT 61.959 66.667 3.76 0.00 39.74 4.00
185 186 2.033141 CCACCCAGTGCTCCTGTG 59.967 66.667 3.76 0.00 39.74 3.66
186 187 2.670934 CACCCAGTGCTCCTGTGC 60.671 66.667 3.76 0.00 39.74 4.57
187 188 3.170672 ACCCAGTGCTCCTGTGCA 61.171 61.111 3.76 0.00 39.74 4.57
188 189 2.353958 CCCAGTGCTCCTGTGCAT 59.646 61.111 0.00 0.00 45.23 3.96
189 190 2.044555 CCCAGTGCTCCTGTGCATG 61.045 63.158 0.00 0.00 45.23 4.06
190 191 1.002990 CCAGTGCTCCTGTGCATGA 60.003 57.895 0.00 0.00 45.23 3.07
191 192 0.393944 CCAGTGCTCCTGTGCATGAT 60.394 55.000 0.00 0.00 45.23 2.45
192 193 0.733150 CAGTGCTCCTGTGCATGATG 59.267 55.000 0.00 0.00 45.23 3.07
193 194 0.393944 AGTGCTCCTGTGCATGATGG 60.394 55.000 0.00 0.00 45.23 3.51
194 195 0.679002 GTGCTCCTGTGCATGATGGT 60.679 55.000 0.00 0.00 45.23 3.55
195 196 0.393402 TGCTCCTGTGCATGATGGTC 60.393 55.000 0.00 0.00 38.12 4.02
196 197 1.434622 GCTCCTGTGCATGATGGTCG 61.435 60.000 0.00 0.00 0.00 4.79
197 198 0.812811 CTCCTGTGCATGATGGTCGG 60.813 60.000 0.00 0.00 0.00 4.79
198 199 2.475466 CCTGTGCATGATGGTCGGC 61.475 63.158 0.00 0.00 0.00 5.54
199 200 2.816360 CTGTGCATGATGGTCGGCG 61.816 63.158 0.00 0.00 0.00 6.46
200 201 2.511373 GTGCATGATGGTCGGCGA 60.511 61.111 4.99 4.99 0.00 5.54
201 202 2.511373 TGCATGATGGTCGGCGAC 60.511 61.111 30.72 30.72 0.00 5.19
202 203 2.511373 GCATGATGGTCGGCGACA 60.511 61.111 37.13 24.67 33.68 4.35
203 204 2.528743 GCATGATGGTCGGCGACAG 61.529 63.158 37.13 20.84 33.68 3.51
204 205 2.202932 ATGATGGTCGGCGACAGC 60.203 61.111 37.13 26.05 44.18 4.40
205 206 4.794439 TGATGGTCGGCGACAGCG 62.794 66.667 37.13 0.00 46.35 5.18
206 207 4.796231 GATGGTCGGCGACAGCGT 62.796 66.667 37.13 23.75 46.35 5.07
216 217 2.202743 GACAGCGTGCGCATCCTA 60.203 61.111 15.91 0.00 44.88 2.94
217 218 1.592669 GACAGCGTGCGCATCCTAT 60.593 57.895 15.91 1.13 44.88 2.57
218 219 1.825285 GACAGCGTGCGCATCCTATG 61.825 60.000 15.91 11.30 44.88 2.23
227 228 4.806936 CATCCTATGCATGGGCGT 57.193 55.556 23.60 12.07 45.35 5.68
228 229 2.250646 CATCCTATGCATGGGCGTG 58.749 57.895 23.60 19.22 45.35 5.34
229 230 1.073722 ATCCTATGCATGGGCGTGG 59.926 57.895 23.60 8.86 45.35 4.94
230 231 1.708993 ATCCTATGCATGGGCGTGGT 61.709 55.000 23.60 4.81 45.35 4.16
231 232 1.893808 CCTATGCATGGGCGTGGTC 60.894 63.158 16.95 0.00 45.35 4.02
232 233 1.153188 CTATGCATGGGCGTGGTCA 60.153 57.895 10.16 0.00 45.35 4.02
233 234 1.439353 CTATGCATGGGCGTGGTCAC 61.439 60.000 10.16 0.00 45.35 3.67
234 235 2.884997 TATGCATGGGCGTGGTCACC 62.885 60.000 10.16 0.00 45.35 4.02
236 237 2.045045 CATGGGCGTGGTCACCAT 60.045 61.111 0.00 0.00 45.48 3.55
237 238 2.114670 CATGGGCGTGGTCACCATC 61.115 63.158 0.00 0.00 42.85 3.51
238 239 3.680620 ATGGGCGTGGTCACCATCG 62.681 63.158 0.00 7.15 40.90 3.84
239 240 4.388499 GGGCGTGGTCACCATCGT 62.388 66.667 16.81 0.00 35.28 3.73
240 241 2.813908 GGCGTGGTCACCATCGTC 60.814 66.667 16.81 12.54 35.28 4.20
241 242 2.261671 GCGTGGTCACCATCGTCT 59.738 61.111 16.81 0.00 35.28 4.18
242 243 1.374252 GCGTGGTCACCATCGTCTT 60.374 57.895 16.81 0.00 35.28 3.01
243 244 1.352156 GCGTGGTCACCATCGTCTTC 61.352 60.000 16.81 0.00 35.28 2.87
244 245 0.038618 CGTGGTCACCATCGTCTTCA 60.039 55.000 0.00 0.00 35.28 3.02
245 246 1.429463 GTGGTCACCATCGTCTTCAC 58.571 55.000 0.00 0.00 35.28 3.18
247 248 0.736325 GGTCACCATCGTCTTCACGG 60.736 60.000 0.00 0.00 46.70 4.94
248 249 0.038526 GTCACCATCGTCTTCACGGT 60.039 55.000 0.00 0.00 46.70 4.83
252 253 3.056458 ATCGTCTTCACGGTGCCA 58.944 55.556 2.51 0.00 46.70 4.92
253 254 1.079819 ATCGTCTTCACGGTGCCAG 60.080 57.895 2.51 2.09 46.70 4.85
254 255 2.507110 ATCGTCTTCACGGTGCCAGG 62.507 60.000 2.51 0.00 46.70 4.45
255 256 2.358737 GTCTTCACGGTGCCAGGG 60.359 66.667 2.51 0.00 0.00 4.45
256 257 2.847234 TCTTCACGGTGCCAGGGT 60.847 61.111 2.51 0.00 0.00 4.34
257 258 2.113139 CTTCACGGTGCCAGGGTT 59.887 61.111 2.51 0.00 0.00 4.11
258 259 1.966451 CTTCACGGTGCCAGGGTTC 60.966 63.158 2.51 0.00 0.00 3.62
259 260 2.674563 CTTCACGGTGCCAGGGTTCA 62.675 60.000 2.51 0.00 0.00 3.18
260 261 2.034066 CACGGTGCCAGGGTTCAT 59.966 61.111 0.00 0.00 0.00 2.57
261 262 2.034066 ACGGTGCCAGGGTTCATG 59.966 61.111 0.00 0.00 0.00 3.07
262 263 2.751436 CGGTGCCAGGGTTCATGG 60.751 66.667 0.00 0.00 41.04 3.66
267 268 2.751436 CCAGGGTTCATGGCACCG 60.751 66.667 8.43 0.00 34.79 4.94
268 269 2.751436 CAGGGTTCATGGCACCGG 60.751 66.667 0.00 0.00 34.79 5.28
269 270 4.740822 AGGGTTCATGGCACCGGC 62.741 66.667 0.00 0.00 34.79 6.13
272 273 3.799755 GTTCATGGCACCGGCGTC 61.800 66.667 6.01 0.00 42.47 5.19
300 301 3.706140 CTCGTTACGGGCATGCTC 58.294 61.111 18.92 13.80 0.00 4.26
301 302 1.141881 CTCGTTACGGGCATGCTCT 59.858 57.895 17.16 5.35 0.00 4.09
302 303 1.148157 CTCGTTACGGGCATGCTCTG 61.148 60.000 17.16 14.10 0.00 3.35
313 314 1.489574 CATGCTCTGCTTCTAGCTCG 58.510 55.000 0.00 0.00 42.97 5.03
314 315 1.110442 ATGCTCTGCTTCTAGCTCGT 58.890 50.000 0.00 0.00 42.97 4.18
315 316 0.453793 TGCTCTGCTTCTAGCTCGTC 59.546 55.000 0.00 0.00 42.97 4.20
316 317 0.248866 GCTCTGCTTCTAGCTCGTCC 60.249 60.000 0.00 0.00 42.97 4.79
317 318 1.388547 CTCTGCTTCTAGCTCGTCCT 58.611 55.000 0.00 0.00 42.97 3.85
318 319 1.065401 CTCTGCTTCTAGCTCGTCCTG 59.935 57.143 0.00 0.00 42.97 3.86
319 320 0.102120 CTGCTTCTAGCTCGTCCTGG 59.898 60.000 0.00 0.00 42.97 4.45
320 321 1.323271 TGCTTCTAGCTCGTCCTGGG 61.323 60.000 0.00 0.00 42.97 4.45
321 322 1.439644 CTTCTAGCTCGTCCTGGGC 59.560 63.158 0.00 0.00 0.00 5.36
322 323 1.000486 TTCTAGCTCGTCCTGGGCT 60.000 57.895 0.00 0.00 39.74 5.19
323 324 0.614979 TTCTAGCTCGTCCTGGGCTT 60.615 55.000 0.00 0.00 37.50 4.35
324 325 1.038130 TCTAGCTCGTCCTGGGCTTC 61.038 60.000 0.00 0.00 37.50 3.86
325 326 2.343163 CTAGCTCGTCCTGGGCTTCG 62.343 65.000 0.00 0.00 37.50 3.79
351 352 4.041917 TACACGTCCGTGCGGGTC 62.042 66.667 18.87 4.05 46.44 4.46
359 360 4.436998 CGTGCGGGTCTGGGAGAC 62.437 72.222 0.00 0.00 44.32 3.36
360 361 4.436998 GTGCGGGTCTGGGAGACG 62.437 72.222 0.00 0.00 45.96 4.18
363 364 3.760035 CGGGTCTGGGAGACGGTG 61.760 72.222 0.00 0.00 45.96 4.94
364 365 4.083862 GGGTCTGGGAGACGGTGC 62.084 72.222 0.00 0.00 45.96 5.01
365 366 4.436998 GGTCTGGGAGACGGTGCG 62.437 72.222 0.00 0.00 45.96 5.34
366 367 4.436998 GTCTGGGAGACGGTGCGG 62.437 72.222 0.00 0.00 35.28 5.69
384 385 4.481195 CACAGGGAGTGTTGGGTG 57.519 61.111 0.00 0.00 43.40 4.61
385 386 1.228245 CACAGGGAGTGTTGGGTGG 60.228 63.158 0.00 0.00 43.40 4.61
386 387 1.696314 ACAGGGAGTGTTGGGTGGT 60.696 57.895 0.00 0.00 34.94 4.16
387 388 1.286305 ACAGGGAGTGTTGGGTGGTT 61.286 55.000 0.00 0.00 34.94 3.67
388 389 0.823356 CAGGGAGTGTTGGGTGGTTG 60.823 60.000 0.00 0.00 0.00 3.77
389 390 1.530655 GGGAGTGTTGGGTGGTTGG 60.531 63.158 0.00 0.00 0.00 3.77
390 391 2.200337 GGAGTGTTGGGTGGTTGGC 61.200 63.158 0.00 0.00 0.00 4.52
391 392 2.123468 AGTGTTGGGTGGTTGGCC 60.123 61.111 0.00 0.00 0.00 5.36
392 393 3.601685 GTGTTGGGTGGTTGGCCG 61.602 66.667 0.00 0.00 37.67 6.13
393 394 4.130554 TGTTGGGTGGTTGGCCGT 62.131 61.111 0.00 0.00 37.67 5.68
394 395 3.601685 GTTGGGTGGTTGGCCGTG 61.602 66.667 0.00 0.00 37.67 4.94
395 396 4.904590 TTGGGTGGTTGGCCGTGG 62.905 66.667 0.00 0.00 37.67 4.94
399 400 4.054825 GTGGTTGGCCGTGGCATG 62.055 66.667 13.76 0.00 44.11 4.06
413 414 3.879682 CATGGCGTGCATCGGTGG 61.880 66.667 0.00 0.00 40.26 4.61
414 415 4.408821 ATGGCGTGCATCGGTGGT 62.409 61.111 0.00 0.00 40.26 4.16
417 418 3.788766 GCGTGCATCGGTGGTCAC 61.789 66.667 0.00 0.00 40.26 3.67
429 430 1.155424 GTGGTCACCAGCGTTTTCGA 61.155 55.000 0.00 0.00 45.97 3.71
430 431 3.301783 GTGGTCACCAGCGTTTTCGAC 62.302 57.143 0.00 0.00 45.97 4.20
445 446 3.165498 GACGTGGTCGCCATTGTC 58.835 61.111 0.00 13.86 41.18 3.18
446 447 2.726691 GACGTGGTCGCCATTGTCG 61.727 63.158 0.00 10.00 41.18 4.35
447 448 4.147322 CGTGGTCGCCATTGTCGC 62.147 66.667 1.90 0.00 35.28 5.19
448 449 3.047280 GTGGTCGCCATTGTCGCA 61.047 61.111 1.90 0.00 35.28 5.10
449 450 2.741985 TGGTCGCCATTGTCGCAG 60.742 61.111 0.00 0.00 0.00 5.18
450 451 2.434185 GGTCGCCATTGTCGCAGA 60.434 61.111 0.00 0.00 0.00 4.26
461 462 4.678499 TCGCAGACACGCATGGCA 62.678 61.111 0.00 0.00 35.60 4.92
462 463 4.156622 CGCAGACACGCATGGCAG 62.157 66.667 0.00 0.00 35.60 4.85
463 464 2.743538 GCAGACACGCATGGCAGA 60.744 61.111 0.00 0.00 35.60 4.26
464 465 2.110967 GCAGACACGCATGGCAGAT 61.111 57.895 0.00 0.00 35.60 2.90
465 466 1.719709 CAGACACGCATGGCAGATG 59.280 57.895 0.00 0.00 35.60 2.90
466 467 1.022982 CAGACACGCATGGCAGATGT 61.023 55.000 0.00 0.00 35.60 3.06
467 468 0.536724 AGACACGCATGGCAGATGTA 59.463 50.000 0.00 0.00 35.60 2.29
468 469 0.652592 GACACGCATGGCAGATGTAC 59.347 55.000 0.00 0.00 32.03 2.90
469 470 1.083806 ACACGCATGGCAGATGTACG 61.084 55.000 0.00 0.00 0.00 3.67
470 471 0.805711 CACGCATGGCAGATGTACGA 60.806 55.000 0.00 0.00 0.00 3.43
471 472 0.806102 ACGCATGGCAGATGTACGAC 60.806 55.000 0.00 0.00 0.00 4.34
472 473 1.811217 CGCATGGCAGATGTACGACG 61.811 60.000 0.00 0.00 0.00 5.12
473 474 0.527600 GCATGGCAGATGTACGACGA 60.528 55.000 0.00 0.00 0.00 4.20
474 475 1.921243 CATGGCAGATGTACGACGAA 58.079 50.000 0.00 0.00 0.00 3.85
475 476 2.267426 CATGGCAGATGTACGACGAAA 58.733 47.619 0.00 0.00 0.00 3.46
476 477 2.665649 TGGCAGATGTACGACGAAAT 57.334 45.000 0.00 0.00 0.00 2.17
477 478 2.267426 TGGCAGATGTACGACGAAATG 58.733 47.619 0.00 0.00 0.00 2.32
478 479 1.004927 GGCAGATGTACGACGAAATGC 60.005 52.381 0.00 2.92 0.00 3.56
479 480 1.658596 GCAGATGTACGACGAAATGCA 59.341 47.619 0.00 0.00 32.79 3.96
480 481 2.285220 GCAGATGTACGACGAAATGCAT 59.715 45.455 0.00 0.00 32.79 3.96
481 482 3.489416 GCAGATGTACGACGAAATGCATA 59.511 43.478 0.00 0.00 32.79 3.14
482 483 4.026062 GCAGATGTACGACGAAATGCATAA 60.026 41.667 0.00 0.00 32.79 1.90
483 484 5.501736 GCAGATGTACGACGAAATGCATAAA 60.502 40.000 0.00 0.00 32.79 1.40
484 485 5.896432 CAGATGTACGACGAAATGCATAAAC 59.104 40.000 0.00 0.00 0.00 2.01
485 486 4.587211 TGTACGACGAAATGCATAAACC 57.413 40.909 0.00 0.00 0.00 3.27
486 487 3.995048 TGTACGACGAAATGCATAAACCA 59.005 39.130 0.00 0.00 0.00 3.67
487 488 4.451435 TGTACGACGAAATGCATAAACCAA 59.549 37.500 0.00 0.00 0.00 3.67
488 489 4.491234 ACGACGAAATGCATAAACCAAA 57.509 36.364 0.00 0.00 0.00 3.28
489 490 4.861210 ACGACGAAATGCATAAACCAAAA 58.139 34.783 0.00 0.00 0.00 2.44
490 491 4.677832 ACGACGAAATGCATAAACCAAAAC 59.322 37.500 0.00 0.00 0.00 2.43
491 492 4.201353 CGACGAAATGCATAAACCAAAACG 60.201 41.667 0.00 0.00 0.00 3.60
492 493 4.612943 ACGAAATGCATAAACCAAAACGT 58.387 34.783 0.00 0.00 0.00 3.99
493 494 5.759963 ACGAAATGCATAAACCAAAACGTA 58.240 33.333 0.00 0.00 0.00 3.57
494 495 6.207213 ACGAAATGCATAAACCAAAACGTAA 58.793 32.000 0.00 0.00 0.00 3.18
515 516 7.450627 CGTAAGTTTACTCCGTCAAATTTAGG 58.549 38.462 0.00 0.00 0.00 2.69
516 517 7.329226 CGTAAGTTTACTCCGTCAAATTTAGGA 59.671 37.037 8.38 8.38 30.06 2.94
523 524 5.677319 TCCGTCAAATTTAGGAGATCAGT 57.323 39.130 0.00 0.00 0.00 3.41
524 525 6.049955 TCCGTCAAATTTAGGAGATCAGTT 57.950 37.500 0.00 0.00 0.00 3.16
525 526 7.177832 TCCGTCAAATTTAGGAGATCAGTTA 57.822 36.000 0.00 0.00 0.00 2.24
526 527 7.265673 TCCGTCAAATTTAGGAGATCAGTTAG 58.734 38.462 0.00 0.00 0.00 2.34
527 528 7.123697 TCCGTCAAATTTAGGAGATCAGTTAGA 59.876 37.037 0.00 0.00 0.00 2.10
528 529 7.764443 CCGTCAAATTTAGGAGATCAGTTAGAA 59.236 37.037 0.00 0.00 0.00 2.10
529 530 8.596380 CGTCAAATTTAGGAGATCAGTTAGAAC 58.404 37.037 0.00 0.00 0.00 3.01
530 531 8.884726 GTCAAATTTAGGAGATCAGTTAGAACC 58.115 37.037 0.00 0.00 0.00 3.62
531 532 7.764443 TCAAATTTAGGAGATCAGTTAGAACCG 59.236 37.037 0.00 0.00 0.00 4.44
532 533 7.419711 AATTTAGGAGATCAGTTAGAACCGA 57.580 36.000 0.00 0.00 0.00 4.69
533 534 5.831702 TTAGGAGATCAGTTAGAACCGAC 57.168 43.478 0.00 0.00 0.00 4.79
534 535 3.025262 AGGAGATCAGTTAGAACCGACC 58.975 50.000 0.00 0.00 0.00 4.79
535 536 2.758979 GGAGATCAGTTAGAACCGACCA 59.241 50.000 0.00 0.00 0.00 4.02
536 537 3.194968 GGAGATCAGTTAGAACCGACCAA 59.805 47.826 0.00 0.00 0.00 3.67
537 538 4.322499 GGAGATCAGTTAGAACCGACCAAA 60.322 45.833 0.00 0.00 0.00 3.28
538 539 4.566987 AGATCAGTTAGAACCGACCAAAC 58.433 43.478 0.00 0.00 0.00 2.93
539 540 4.283722 AGATCAGTTAGAACCGACCAAACT 59.716 41.667 0.00 0.00 0.00 2.66
540 541 4.411256 TCAGTTAGAACCGACCAAACTT 57.589 40.909 0.00 0.00 0.00 2.66
541 542 5.534207 TCAGTTAGAACCGACCAAACTTA 57.466 39.130 0.00 0.00 0.00 2.24
542 543 5.535333 TCAGTTAGAACCGACCAAACTTAG 58.465 41.667 0.00 0.00 0.00 2.18
543 544 5.069516 TCAGTTAGAACCGACCAAACTTAGT 59.930 40.000 0.00 0.00 0.00 2.24
544 545 5.176958 CAGTTAGAACCGACCAAACTTAGTG 59.823 44.000 0.00 0.00 0.00 2.74
545 546 3.121738 AGAACCGACCAAACTTAGTGG 57.878 47.619 0.00 0.00 42.28 4.00
546 547 2.701951 AGAACCGACCAAACTTAGTGGA 59.298 45.455 0.00 0.00 39.62 4.02
547 548 2.833631 ACCGACCAAACTTAGTGGAG 57.166 50.000 0.00 0.00 39.62 3.86
548 549 2.044758 ACCGACCAAACTTAGTGGAGT 58.955 47.619 0.00 0.00 39.62 3.85
549 550 3.233507 ACCGACCAAACTTAGTGGAGTA 58.766 45.455 0.00 0.00 39.62 2.59
550 551 3.642848 ACCGACCAAACTTAGTGGAGTAA 59.357 43.478 0.00 0.00 39.62 2.24
551 552 4.101430 ACCGACCAAACTTAGTGGAGTAAA 59.899 41.667 0.00 0.00 39.62 2.01
552 553 4.689345 CCGACCAAACTTAGTGGAGTAAAG 59.311 45.833 0.00 0.00 39.62 1.85
553 554 5.510179 CCGACCAAACTTAGTGGAGTAAAGA 60.510 44.000 0.00 0.00 39.62 2.52
554 555 6.164176 CGACCAAACTTAGTGGAGTAAAGAT 58.836 40.000 0.00 0.00 39.62 2.40
555 556 7.318141 CGACCAAACTTAGTGGAGTAAAGATA 58.682 38.462 0.00 0.00 39.62 1.98
556 557 7.275123 CGACCAAACTTAGTGGAGTAAAGATAC 59.725 40.741 0.00 0.00 39.62 2.24
557 558 8.203681 ACCAAACTTAGTGGAGTAAAGATACT 57.796 34.615 0.00 0.00 45.10 2.12
572 573 9.187996 AGTAAAGATACTCCACTAAGGTTACTC 57.812 37.037 0.00 0.00 37.90 2.59
573 574 6.696441 AAGATACTCCACTAAGGTTACTCG 57.304 41.667 0.00 0.00 39.02 4.18
574 575 5.131784 AGATACTCCACTAAGGTTACTCGG 58.868 45.833 0.00 0.00 39.02 4.63
575 576 3.166560 ACTCCACTAAGGTTACTCGGT 57.833 47.619 0.00 0.00 39.02 4.69
576 577 3.087781 ACTCCACTAAGGTTACTCGGTC 58.912 50.000 0.00 0.00 39.02 4.79
577 578 2.086869 TCCACTAAGGTTACTCGGTCG 58.913 52.381 0.00 0.00 39.02 4.79
578 579 1.815003 CCACTAAGGTTACTCGGTCGT 59.185 52.381 0.00 0.00 0.00 4.34
579 580 3.009723 CCACTAAGGTTACTCGGTCGTA 58.990 50.000 0.00 0.00 0.00 3.43
580 581 3.629398 CCACTAAGGTTACTCGGTCGTAT 59.371 47.826 0.00 0.00 0.00 3.06
581 582 4.260948 CCACTAAGGTTACTCGGTCGTATC 60.261 50.000 0.00 0.00 0.00 2.24
582 583 3.879892 ACTAAGGTTACTCGGTCGTATCC 59.120 47.826 0.00 0.00 32.04 2.59
583 584 2.725221 AGGTTACTCGGTCGTATCCT 57.275 50.000 0.00 0.00 35.66 3.24
584 585 2.570135 AGGTTACTCGGTCGTATCCTC 58.430 52.381 0.00 0.00 35.62 3.71
585 586 1.606189 GGTTACTCGGTCGTATCCTCC 59.394 57.143 0.00 0.00 0.00 4.30
586 587 2.570135 GTTACTCGGTCGTATCCTCCT 58.430 52.381 0.00 0.00 0.00 3.69
587 588 2.948315 GTTACTCGGTCGTATCCTCCTT 59.052 50.000 0.00 0.00 0.00 3.36
588 589 2.140839 ACTCGGTCGTATCCTCCTTT 57.859 50.000 0.00 0.00 0.00 3.11
589 590 3.287867 ACTCGGTCGTATCCTCCTTTA 57.712 47.619 0.00 0.00 0.00 1.85
590 591 3.830121 ACTCGGTCGTATCCTCCTTTAT 58.170 45.455 0.00 0.00 0.00 1.40
591 592 4.213513 ACTCGGTCGTATCCTCCTTTATT 58.786 43.478 0.00 0.00 0.00 1.40
592 593 4.648307 ACTCGGTCGTATCCTCCTTTATTT 59.352 41.667 0.00 0.00 0.00 1.40
593 594 5.128335 ACTCGGTCGTATCCTCCTTTATTTT 59.872 40.000 0.00 0.00 0.00 1.82
594 595 5.981174 TCGGTCGTATCCTCCTTTATTTTT 58.019 37.500 0.00 0.00 0.00 1.94
615 616 6.445357 TTTTAAGGATCGGTTAGAAATGCC 57.555 37.500 0.00 0.00 0.00 4.40
616 617 2.640316 AGGATCGGTTAGAAATGCCC 57.360 50.000 0.00 0.00 0.00 5.36
617 618 2.127708 AGGATCGGTTAGAAATGCCCT 58.872 47.619 0.00 0.00 0.00 5.19
618 619 3.314693 AGGATCGGTTAGAAATGCCCTA 58.685 45.455 0.00 0.00 0.00 3.53
619 620 3.714798 AGGATCGGTTAGAAATGCCCTAA 59.285 43.478 0.00 0.00 0.00 2.69
620 621 4.351111 AGGATCGGTTAGAAATGCCCTAAT 59.649 41.667 0.00 0.00 0.00 1.73
621 622 5.070685 GGATCGGTTAGAAATGCCCTAATT 58.929 41.667 0.00 0.00 0.00 1.40
622 623 5.535030 GGATCGGTTAGAAATGCCCTAATTT 59.465 40.000 0.00 0.00 32.43 1.82
623 624 6.713450 GGATCGGTTAGAAATGCCCTAATTTA 59.287 38.462 0.00 0.00 29.89 1.40
624 625 7.229907 GGATCGGTTAGAAATGCCCTAATTTAA 59.770 37.037 0.00 0.00 29.89 1.52
625 626 8.706322 ATCGGTTAGAAATGCCCTAATTTAAT 57.294 30.769 0.00 0.00 29.89 1.40
626 627 8.528044 TCGGTTAGAAATGCCCTAATTTAATT 57.472 30.769 0.00 0.00 29.89 1.40
627 628 8.626526 TCGGTTAGAAATGCCCTAATTTAATTC 58.373 33.333 0.00 0.00 29.89 2.17
628 629 7.865889 CGGTTAGAAATGCCCTAATTTAATTCC 59.134 37.037 0.00 0.00 29.89 3.01
629 630 8.148351 GGTTAGAAATGCCCTAATTTAATTCCC 58.852 37.037 0.00 0.00 29.89 3.97
630 631 8.924303 GTTAGAAATGCCCTAATTTAATTCCCT 58.076 33.333 0.00 0.00 29.89 4.20
631 632 7.603180 AGAAATGCCCTAATTTAATTCCCTC 57.397 36.000 0.00 0.00 29.89 4.30
632 633 7.132128 AGAAATGCCCTAATTTAATTCCCTCA 58.868 34.615 0.00 0.00 29.89 3.86
633 634 6.731292 AATGCCCTAATTTAATTCCCTCAC 57.269 37.500 0.00 0.00 0.00 3.51
634 635 5.199982 TGCCCTAATTTAATTCCCTCACA 57.800 39.130 0.00 0.00 0.00 3.58
635 636 4.953579 TGCCCTAATTTAATTCCCTCACAC 59.046 41.667 0.00 0.00 0.00 3.82
636 637 5.201243 GCCCTAATTTAATTCCCTCACACT 58.799 41.667 0.00 0.00 0.00 3.55
637 638 6.069323 TGCCCTAATTTAATTCCCTCACACTA 60.069 38.462 0.00 0.00 0.00 2.74
638 639 7.004691 GCCCTAATTTAATTCCCTCACACTAT 58.995 38.462 0.00 0.00 0.00 2.12
639 640 7.505923 GCCCTAATTTAATTCCCTCACACTATT 59.494 37.037 0.00 0.00 0.00 1.73
640 641 9.421399 CCCTAATTTAATTCCCTCACACTATTT 57.579 33.333 0.00 0.00 0.00 1.40
643 644 6.995511 TTTAATTCCCTCACACTATTTCCG 57.004 37.500 0.00 0.00 0.00 4.30
644 645 4.837093 AATTCCCTCACACTATTTCCGA 57.163 40.909 0.00 0.00 0.00 4.55
645 646 3.887621 TTCCCTCACACTATTTCCGAG 57.112 47.619 0.00 0.00 0.00 4.63
646 647 2.108168 TCCCTCACACTATTTCCGAGG 58.892 52.381 0.00 0.00 42.46 4.63
647 648 2.108168 CCCTCACACTATTTCCGAGGA 58.892 52.381 5.33 0.00 45.08 3.71
648 649 2.500098 CCCTCACACTATTTCCGAGGAA 59.500 50.000 5.33 0.00 45.08 3.36
649 650 3.522553 CCTCACACTATTTCCGAGGAAC 58.477 50.000 3.71 0.00 45.08 3.62
650 651 3.522553 CTCACACTATTTCCGAGGAACC 58.477 50.000 3.71 0.00 33.41 3.62
772 773 4.770362 TCCCGGGCGATCTGGACA 62.770 66.667 18.49 0.00 44.90 4.02
852 853 1.135939 GTGCCACCGCCGTTATTTC 59.864 57.895 0.00 0.00 0.00 2.17
859 860 2.104253 CGCCGTTATTTCCGTGCCT 61.104 57.895 0.00 0.00 0.00 4.75
876 877 0.464452 CCTCGCCGAGGGTATTTTCT 59.536 55.000 25.49 0.00 45.43 2.52
970 975 3.467226 CCGCCGCCTCCCTTTCTA 61.467 66.667 0.00 0.00 0.00 2.10
971 976 2.202892 CGCCGCCTCCCTTTCTAC 60.203 66.667 0.00 0.00 0.00 2.59
972 977 2.189784 GCCGCCTCCCTTTCTACC 59.810 66.667 0.00 0.00 0.00 3.18
973 978 2.499685 CCGCCTCCCTTTCTACCG 59.500 66.667 0.00 0.00 0.00 4.02
974 979 2.356780 CCGCCTCCCTTTCTACCGT 61.357 63.158 0.00 0.00 0.00 4.83
975 980 1.153628 CGCCTCCCTTTCTACCGTG 60.154 63.158 0.00 0.00 0.00 4.94
976 981 1.221021 GCCTCCCTTTCTACCGTGG 59.779 63.158 0.00 0.00 0.00 4.94
977 982 1.221021 CCTCCCTTTCTACCGTGGC 59.779 63.158 0.00 0.00 0.00 5.01
978 983 1.221021 CTCCCTTTCTACCGTGGCC 59.779 63.158 0.00 0.00 0.00 5.36
979 984 2.125269 CCCTTTCTACCGTGGCCG 60.125 66.667 0.00 0.00 0.00 6.13
980 985 2.818274 CCTTTCTACCGTGGCCGC 60.818 66.667 6.11 6.11 0.00 6.53
981 986 2.818274 CTTTCTACCGTGGCCGCC 60.818 66.667 11.56 1.04 0.00 6.13
982 987 4.745751 TTTCTACCGTGGCCGCCG 62.746 66.667 11.56 9.36 0.00 6.46
1096 1140 1.760086 CTCCTCTGGTCGCCCTCAT 60.760 63.158 0.00 0.00 0.00 2.90
1170 1550 3.168528 ACCACCACGGCCAACTCT 61.169 61.111 2.24 0.00 39.03 3.24
1262 1642 3.537874 GACGTGCCGCCCCTCTAT 61.538 66.667 0.00 0.00 0.00 1.98
1271 1651 3.164269 CCCCTCTATGCACGGCCT 61.164 66.667 0.00 0.00 0.00 5.19
1295 1675 1.754803 CTAACCCTAGCACCACGATCA 59.245 52.381 0.00 0.00 0.00 2.92
1373 1754 2.126189 CGACCCCGTCCGAACTTC 60.126 66.667 0.00 0.00 0.00 3.01
1458 1840 2.809601 GTCCTCGCGTTCGTGCAT 60.810 61.111 5.77 0.00 36.96 3.96
1473 1855 2.354103 CGTGCATCTCCAGGAAGAAGAA 60.354 50.000 0.00 0.00 0.00 2.52
1507 1889 3.822192 CCTCGGATCCGTCGTGCA 61.822 66.667 32.15 12.31 40.74 4.57
1594 1991 5.973651 TTTTTCTGCAGCTCGACATATAG 57.026 39.130 9.47 0.00 0.00 1.31
1595 1992 3.650070 TTCTGCAGCTCGACATATAGG 57.350 47.619 9.47 0.00 0.00 2.57
1596 1993 2.587522 TCTGCAGCTCGACATATAGGT 58.412 47.619 9.47 0.00 0.00 3.08
1597 1994 2.554462 TCTGCAGCTCGACATATAGGTC 59.446 50.000 9.47 7.47 34.42 3.85
1598 1995 2.294512 CTGCAGCTCGACATATAGGTCA 59.705 50.000 17.02 4.34 37.66 4.02
1599 1996 2.294512 TGCAGCTCGACATATAGGTCAG 59.705 50.000 17.02 13.37 37.66 3.51
1600 1997 2.294791 GCAGCTCGACATATAGGTCAGT 59.705 50.000 17.02 0.00 37.66 3.41
1605 2002 4.602006 CTCGACATATAGGTCAGTGTGTG 58.398 47.826 17.02 0.00 37.66 3.82
1629 2026 2.031616 TGTGCAGCAGCTCCAGAC 59.968 61.111 1.76 0.00 42.74 3.51
1850 2250 7.601856 TGGGTTGATTCAAGATAATTTGTGAC 58.398 34.615 0.00 0.00 0.00 3.67
1947 2445 3.861276 AAGATTGCATGACACCACATG 57.139 42.857 0.00 0.00 46.96 3.21
2001 2501 4.427661 GCGAGCTCACTGCCGTCT 62.428 66.667 15.40 0.00 44.23 4.18
2030 2530 1.684049 CGTGCTTCCCTCTCCCTCT 60.684 63.158 0.00 0.00 0.00 3.69
2031 2531 1.261238 CGTGCTTCCCTCTCCCTCTT 61.261 60.000 0.00 0.00 0.00 2.85
2035 2535 1.209261 GCTTCCCTCTCCCTCTTTCTG 59.791 57.143 0.00 0.00 0.00 3.02
2039 2539 1.277557 CCCTCTCCCTCTTTCTGTGTG 59.722 57.143 0.00 0.00 0.00 3.82
2045 2545 2.238646 TCCCTCTTTCTGTGTGTGTGTT 59.761 45.455 0.00 0.00 0.00 3.32
2108 2612 0.471617 GCAGCTGGTCTGGGATATGT 59.528 55.000 17.12 0.00 43.06 2.29
2166 2670 2.581208 AAGTCGTGGTTGCGTGGACA 62.581 55.000 0.00 0.00 0.00 4.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.068881 CCACCACCACGATGGAGT 58.931 61.111 10.46 5.25 43.02 3.85
1 2 2.436646 GCCACCACCACGATGGAG 60.437 66.667 10.46 3.34 43.02 3.86
2 3 4.386951 CGCCACCACCACGATGGA 62.387 66.667 10.46 0.00 43.02 3.41
3 4 4.697756 ACGCCACCACCACGATGG 62.698 66.667 0.00 0.00 46.10 3.51
4 5 2.668212 AACGCCACCACCACGATG 60.668 61.111 0.00 0.00 0.00 3.84
5 6 2.358247 GAACGCCACCACCACGAT 60.358 61.111 0.00 0.00 0.00 3.73
6 7 4.612412 GGAACGCCACCACCACGA 62.612 66.667 0.00 0.00 0.00 4.35
7 8 4.619227 AGGAACGCCACCACCACG 62.619 66.667 0.00 0.00 36.29 4.94
8 9 2.668550 GAGGAACGCCACCACCAC 60.669 66.667 0.00 0.00 36.29 4.16
9 10 4.308458 CGAGGAACGCCACCACCA 62.308 66.667 0.00 0.00 36.29 4.17
23 24 1.592669 CTAGTTGGATGGCCGCGAG 60.593 63.158 8.23 0.00 36.79 5.03
24 25 2.292794 GACTAGTTGGATGGCCGCGA 62.293 60.000 8.23 0.00 36.79 5.87
25 26 1.883084 GACTAGTTGGATGGCCGCG 60.883 63.158 0.00 0.00 36.79 6.46
26 27 0.179045 ATGACTAGTTGGATGGCCGC 60.179 55.000 0.00 0.00 36.79 6.53
27 28 1.541233 GGATGACTAGTTGGATGGCCG 60.541 57.143 0.00 0.00 36.79 6.13
28 29 1.771255 AGGATGACTAGTTGGATGGCC 59.229 52.381 0.00 0.00 0.00 5.36
29 30 2.843701 CAGGATGACTAGTTGGATGGC 58.156 52.381 0.00 0.00 39.69 4.40
30 31 2.437281 AGCAGGATGACTAGTTGGATGG 59.563 50.000 0.00 0.00 39.69 3.51
31 32 3.726607 GAGCAGGATGACTAGTTGGATG 58.273 50.000 0.00 0.00 39.69 3.51
32 33 2.363680 CGAGCAGGATGACTAGTTGGAT 59.636 50.000 0.00 0.00 39.69 3.41
33 34 1.751351 CGAGCAGGATGACTAGTTGGA 59.249 52.381 0.00 0.00 39.69 3.53
34 35 1.804372 GCGAGCAGGATGACTAGTTGG 60.804 57.143 0.00 0.00 39.69 3.77
35 36 1.134995 TGCGAGCAGGATGACTAGTTG 60.135 52.381 0.00 0.00 39.69 3.16
36 37 1.134965 GTGCGAGCAGGATGACTAGTT 60.135 52.381 0.00 0.00 39.69 2.24
37 38 0.457851 GTGCGAGCAGGATGACTAGT 59.542 55.000 0.00 0.00 39.69 2.57
38 39 0.249238 GGTGCGAGCAGGATGACTAG 60.249 60.000 0.00 0.00 39.69 2.57
39 40 1.816537 GGTGCGAGCAGGATGACTA 59.183 57.895 0.00 0.00 39.69 2.59
40 41 2.581354 GGTGCGAGCAGGATGACT 59.419 61.111 0.00 0.00 39.69 3.41
41 42 2.887568 CGGTGCGAGCAGGATGAC 60.888 66.667 0.00 0.00 39.69 3.06
42 43 3.381983 ACGGTGCGAGCAGGATGA 61.382 61.111 0.00 0.00 39.69 2.92
43 44 3.190849 CACGGTGCGAGCAGGATG 61.191 66.667 0.00 0.00 40.87 3.51
44 45 3.695606 ACACGGTGCGAGCAGGAT 61.696 61.111 8.30 0.00 0.00 3.24
45 46 4.662961 CACACGGTGCGAGCAGGA 62.663 66.667 8.30 0.00 0.00 3.86
66 67 4.156622 TCGTACTGCGCGAGGTCG 62.157 66.667 12.10 13.06 41.07 4.79
71 72 4.175489 GCTCCTCGTACTGCGCGA 62.175 66.667 12.10 0.00 41.07 5.87
72 73 4.180946 AGCTCCTCGTACTGCGCG 62.181 66.667 0.00 0.00 41.07 6.86
73 74 2.278271 GAGCTCCTCGTACTGCGC 60.278 66.667 0.87 0.00 41.07 6.09
107 108 1.656263 GCAATGTCATCCGCATGCG 60.656 57.895 32.60 32.60 39.44 4.73
108 109 1.299620 GGCAATGTCATCCGCATGC 60.300 57.895 7.91 7.91 0.00 4.06
109 110 0.030235 CTGGCAATGTCATCCGCATG 59.970 55.000 8.88 0.00 0.00 4.06
110 111 1.105167 CCTGGCAATGTCATCCGCAT 61.105 55.000 8.88 0.00 0.00 4.73
111 112 1.750018 CCTGGCAATGTCATCCGCA 60.750 57.895 8.88 0.00 0.00 5.69
112 113 1.750399 ACCTGGCAATGTCATCCGC 60.750 57.895 0.00 0.00 0.00 5.54
113 114 1.378882 CCACCTGGCAATGTCATCCG 61.379 60.000 0.00 0.00 0.00 4.18
114 115 0.034186 TCCACCTGGCAATGTCATCC 60.034 55.000 0.00 0.00 34.44 3.51
115 116 1.747355 CTTCCACCTGGCAATGTCATC 59.253 52.381 0.00 0.00 34.44 2.92
116 117 1.843368 CTTCCACCTGGCAATGTCAT 58.157 50.000 0.00 0.00 34.44 3.06
117 118 0.895100 GCTTCCACCTGGCAATGTCA 60.895 55.000 0.00 0.00 34.44 3.58
118 119 0.610232 AGCTTCCACCTGGCAATGTC 60.610 55.000 0.00 0.00 34.44 3.06
119 120 0.610232 GAGCTTCCACCTGGCAATGT 60.610 55.000 0.00 0.00 34.44 2.71
120 121 1.651240 CGAGCTTCCACCTGGCAATG 61.651 60.000 0.00 0.00 34.44 2.82
121 122 1.377725 CGAGCTTCCACCTGGCAAT 60.378 57.895 0.00 0.00 34.44 3.56
122 123 2.032528 CGAGCTTCCACCTGGCAA 59.967 61.111 0.00 0.00 34.44 4.52
123 124 3.241530 ACGAGCTTCCACCTGGCA 61.242 61.111 0.00 0.00 34.44 4.92
124 125 2.743928 CACGAGCTTCCACCTGGC 60.744 66.667 0.00 0.00 34.44 4.85
125 126 2.046892 CCACGAGCTTCCACCTGG 60.047 66.667 0.00 0.00 0.00 4.45
126 127 2.743928 GCCACGAGCTTCCACCTG 60.744 66.667 0.00 0.00 38.99 4.00
127 128 4.021925 GGCCACGAGCTTCCACCT 62.022 66.667 0.00 0.00 43.05 4.00
160 161 4.729918 CACTGGGTGGCTGGGCTC 62.730 72.222 0.00 0.00 0.00 4.70
163 164 4.729918 GAGCACTGGGTGGCTGGG 62.730 72.222 0.00 0.00 41.22 4.45
164 165 4.729918 GGAGCACTGGGTGGCTGG 62.730 72.222 0.00 0.00 41.22 4.85
165 166 3.644606 AGGAGCACTGGGTGGCTG 61.645 66.667 0.00 0.00 41.22 4.85
166 167 3.644606 CAGGAGCACTGGGTGGCT 61.645 66.667 0.82 0.00 43.70 4.75
177 178 1.434622 CGACCATCATGCACAGGAGC 61.435 60.000 0.00 0.00 0.00 4.70
178 179 0.812811 CCGACCATCATGCACAGGAG 60.813 60.000 0.00 0.00 0.00 3.69
179 180 1.221566 CCGACCATCATGCACAGGA 59.778 57.895 0.00 0.00 0.00 3.86
180 181 2.475466 GCCGACCATCATGCACAGG 61.475 63.158 0.00 0.00 0.00 4.00
181 182 2.816360 CGCCGACCATCATGCACAG 61.816 63.158 0.00 0.00 0.00 3.66
182 183 2.819154 CGCCGACCATCATGCACA 60.819 61.111 0.00 0.00 0.00 4.57
183 184 2.511373 TCGCCGACCATCATGCAC 60.511 61.111 0.00 0.00 0.00 4.57
184 185 2.511373 GTCGCCGACCATCATGCA 60.511 61.111 5.81 0.00 0.00 3.96
185 186 2.511373 TGTCGCCGACCATCATGC 60.511 61.111 15.60 0.00 0.00 4.06
186 187 2.528743 GCTGTCGCCGACCATCATG 61.529 63.158 15.60 0.00 0.00 3.07
187 188 2.202932 GCTGTCGCCGACCATCAT 60.203 61.111 15.60 0.00 0.00 2.45
188 189 4.794439 CGCTGTCGCCGACCATCA 62.794 66.667 15.60 0.00 0.00 3.07
189 190 4.796231 ACGCTGTCGCCGACCATC 62.796 66.667 15.60 2.69 39.84 3.51
199 200 1.592669 ATAGGATGCGCACGCTGTC 60.593 57.895 14.90 5.65 42.51 3.51
200 201 1.884464 CATAGGATGCGCACGCTGT 60.884 57.895 14.90 0.00 42.51 4.40
201 202 2.933666 CATAGGATGCGCACGCTG 59.066 61.111 14.90 2.17 42.51 5.18
210 211 1.239296 CCACGCCCATGCATAGGATG 61.239 60.000 16.01 11.52 37.32 3.51
211 212 1.073722 CCACGCCCATGCATAGGAT 59.926 57.895 16.01 0.00 37.32 3.24
212 213 2.324014 GACCACGCCCATGCATAGGA 62.324 60.000 16.01 0.00 37.32 2.94
213 214 1.893808 GACCACGCCCATGCATAGG 60.894 63.158 6.82 6.82 37.32 2.57
214 215 1.153188 TGACCACGCCCATGCATAG 60.153 57.895 0.00 0.00 37.32 2.23
215 216 1.451207 GTGACCACGCCCATGCATA 60.451 57.895 0.00 0.00 37.32 3.14
216 217 2.751436 GTGACCACGCCCATGCAT 60.751 61.111 0.00 0.00 37.32 3.96
219 220 2.045045 ATGGTGACCACGCCCATG 60.045 61.111 6.40 0.00 45.20 3.66
220 221 2.272146 GATGGTGACCACGCCCAT 59.728 61.111 6.40 0.00 45.20 4.00
221 222 4.386951 CGATGGTGACCACGCCCA 62.387 66.667 6.40 0.00 45.20 5.36
222 223 4.388499 ACGATGGTGACCACGCCC 62.388 66.667 20.79 5.96 45.20 6.13
223 224 2.781595 AAGACGATGGTGACCACGCC 62.782 60.000 20.79 13.40 45.91 5.68
224 225 1.352156 GAAGACGATGGTGACCACGC 61.352 60.000 20.79 15.15 35.80 5.34
225 226 0.038618 TGAAGACGATGGTGACCACG 60.039 55.000 19.76 19.76 35.80 4.94
226 227 1.429463 GTGAAGACGATGGTGACCAC 58.571 55.000 6.40 0.00 35.80 4.16
227 228 3.906660 GTGAAGACGATGGTGACCA 57.093 52.632 6.84 6.84 38.19 4.02
237 238 2.738521 CCTGGCACCGTGAAGACG 60.739 66.667 1.65 0.00 45.67 4.18
238 239 2.358737 CCCTGGCACCGTGAAGAC 60.359 66.667 1.65 0.00 0.00 3.01
239 240 2.391724 GAACCCTGGCACCGTGAAGA 62.392 60.000 1.65 0.00 0.00 2.87
240 241 1.966451 GAACCCTGGCACCGTGAAG 60.966 63.158 1.65 0.00 0.00 3.02
241 242 2.063015 ATGAACCCTGGCACCGTGAA 62.063 55.000 1.65 0.00 0.00 3.18
242 243 2.525124 ATGAACCCTGGCACCGTGA 61.525 57.895 1.65 0.00 0.00 4.35
243 244 2.034066 ATGAACCCTGGCACCGTG 59.966 61.111 0.00 0.00 0.00 4.94
244 245 2.034066 CATGAACCCTGGCACCGT 59.966 61.111 0.00 0.00 0.00 4.83
245 246 2.751436 CCATGAACCCTGGCACCG 60.751 66.667 0.00 0.00 0.00 4.94
250 251 2.751436 CGGTGCCATGAACCCTGG 60.751 66.667 10.83 0.00 33.88 4.45
251 252 2.751436 CCGGTGCCATGAACCCTG 60.751 66.667 10.83 1.20 33.88 4.45
252 253 4.740822 GCCGGTGCCATGAACCCT 62.741 66.667 1.90 0.00 33.88 4.34
255 256 3.799755 GACGCCGGTGCCATGAAC 61.800 66.667 16.69 0.00 0.00 3.18
280 281 3.925238 CATGCCCGTAACGAGCGC 61.925 66.667 0.00 0.00 0.00 5.92
281 282 3.925238 GCATGCCCGTAACGAGCG 61.925 66.667 6.36 0.00 0.00 5.03
282 283 2.511600 AGCATGCCCGTAACGAGC 60.512 61.111 15.66 0.00 0.00 5.03
283 284 1.141881 AGAGCATGCCCGTAACGAG 59.858 57.895 15.66 0.00 0.00 4.18
284 285 1.153647 CAGAGCATGCCCGTAACGA 60.154 57.895 15.66 0.00 0.00 3.85
285 286 3.398920 CAGAGCATGCCCGTAACG 58.601 61.111 15.66 0.00 0.00 3.18
294 295 1.202394 ACGAGCTAGAAGCAGAGCATG 60.202 52.381 0.00 0.00 45.56 4.06
295 296 1.066908 GACGAGCTAGAAGCAGAGCAT 59.933 52.381 0.00 0.00 45.56 3.79
296 297 0.453793 GACGAGCTAGAAGCAGAGCA 59.546 55.000 0.00 0.00 45.56 4.26
297 298 0.248866 GGACGAGCTAGAAGCAGAGC 60.249 60.000 0.00 0.00 45.56 4.09
298 299 1.065401 CAGGACGAGCTAGAAGCAGAG 59.935 57.143 0.00 0.00 45.56 3.35
299 300 1.098869 CAGGACGAGCTAGAAGCAGA 58.901 55.000 0.00 0.00 45.56 4.26
300 301 0.102120 CCAGGACGAGCTAGAAGCAG 59.898 60.000 0.00 0.00 45.56 4.24
301 302 1.323271 CCCAGGACGAGCTAGAAGCA 61.323 60.000 0.00 0.00 45.56 3.91
302 303 1.439644 CCCAGGACGAGCTAGAAGC 59.560 63.158 0.00 0.00 42.84 3.86
303 304 1.040339 AGCCCAGGACGAGCTAGAAG 61.040 60.000 0.00 0.00 34.38 2.85
304 305 0.614979 AAGCCCAGGACGAGCTAGAA 60.615 55.000 0.00 0.00 35.30 2.10
305 306 1.000486 AAGCCCAGGACGAGCTAGA 60.000 57.895 0.00 0.00 35.30 2.43
306 307 1.439644 GAAGCCCAGGACGAGCTAG 59.560 63.158 0.00 0.00 35.30 3.42
307 308 2.415608 CGAAGCCCAGGACGAGCTA 61.416 63.158 0.00 0.00 35.30 3.32
308 309 3.764466 CGAAGCCCAGGACGAGCT 61.764 66.667 0.00 0.00 38.88 4.09
333 334 4.347453 ACCCGCACGGACGTGTAC 62.347 66.667 23.57 9.14 46.90 2.90
334 335 4.041917 GACCCGCACGGACGTGTA 62.042 66.667 23.57 0.00 46.90 2.90
342 343 4.436998 GTCTCCCAGACCCGCACG 62.437 72.222 0.00 0.00 39.28 5.34
343 344 4.436998 CGTCTCCCAGACCCGCAC 62.437 72.222 0.00 0.00 42.12 5.34
346 347 3.760035 CACCGTCTCCCAGACCCG 61.760 72.222 0.00 0.00 42.12 5.28
347 348 4.083862 GCACCGTCTCCCAGACCC 62.084 72.222 0.00 0.00 42.12 4.46
348 349 4.436998 CGCACCGTCTCCCAGACC 62.437 72.222 0.00 0.00 42.12 3.85
349 350 4.436998 CCGCACCGTCTCCCAGAC 62.437 72.222 0.00 0.00 41.71 3.51
368 369 1.286305 AACCACCCAACACTCCCTGT 61.286 55.000 0.00 0.00 32.89 4.00
369 370 0.823356 CAACCACCCAACACTCCCTG 60.823 60.000 0.00 0.00 0.00 4.45
370 371 1.536676 CAACCACCCAACACTCCCT 59.463 57.895 0.00 0.00 0.00 4.20
371 372 1.530655 CCAACCACCCAACACTCCC 60.531 63.158 0.00 0.00 0.00 4.30
372 373 2.200337 GCCAACCACCCAACACTCC 61.200 63.158 0.00 0.00 0.00 3.85
373 374 2.200337 GGCCAACCACCCAACACTC 61.200 63.158 0.00 0.00 35.26 3.51
374 375 2.123468 GGCCAACCACCCAACACT 60.123 61.111 0.00 0.00 35.26 3.55
375 376 3.601685 CGGCCAACCACCCAACAC 61.602 66.667 2.24 0.00 34.57 3.32
376 377 4.130554 ACGGCCAACCACCCAACA 62.131 61.111 2.24 0.00 34.57 3.33
377 378 3.601685 CACGGCCAACCACCCAAC 61.602 66.667 2.24 0.00 34.57 3.77
378 379 4.904590 CCACGGCCAACCACCCAA 62.905 66.667 2.24 0.00 34.57 4.12
382 383 4.054825 CATGCCACGGCCAACCAC 62.055 66.667 2.24 0.00 41.09 4.16
396 397 3.879682 CCACCGATGCACGCCATG 61.880 66.667 0.00 0.00 41.07 3.66
397 398 4.408821 ACCACCGATGCACGCCAT 62.409 61.111 0.00 0.00 41.07 4.40
400 401 3.788766 GTGACCACCGATGCACGC 61.789 66.667 0.00 0.00 41.07 5.34
401 402 3.118454 GGTGACCACCGATGCACG 61.118 66.667 3.13 0.00 42.29 5.34
410 411 1.155424 TCGAAAACGCTGGTGACCAC 61.155 55.000 0.00 0.00 0.00 4.16
411 412 1.144276 TCGAAAACGCTGGTGACCA 59.856 52.632 3.40 3.40 0.00 4.02
412 413 1.568025 GTCGAAAACGCTGGTGACC 59.432 57.895 0.00 0.00 0.00 4.02
413 414 1.200839 CGTCGAAAACGCTGGTGAC 59.799 57.895 0.00 0.00 45.76 3.67
414 415 3.620286 CGTCGAAAACGCTGGTGA 58.380 55.556 0.00 0.00 45.76 4.02
428 429 2.726691 CGACAATGGCGACCACGTC 61.727 63.158 0.22 14.78 44.90 4.34
429 430 2.736995 CGACAATGGCGACCACGT 60.737 61.111 0.22 2.23 41.98 4.49
430 431 4.147322 GCGACAATGGCGACCACG 62.147 66.667 14.82 2.23 35.80 4.94
431 432 3.027170 CTGCGACAATGGCGACCAC 62.027 63.158 14.82 0.00 35.80 4.16
432 433 2.741985 CTGCGACAATGGCGACCA 60.742 61.111 14.82 0.00 38.19 4.02
433 434 2.434185 TCTGCGACAATGGCGACC 60.434 61.111 14.82 0.00 0.00 4.79
434 435 2.027073 TGTCTGCGACAATGGCGAC 61.027 57.895 14.82 1.41 39.78 5.19
435 436 2.027073 GTGTCTGCGACAATGGCGA 61.027 57.895 14.82 0.00 44.49 5.54
436 437 2.476051 GTGTCTGCGACAATGGCG 59.524 61.111 3.09 3.09 44.49 5.69
437 438 2.476051 CGTGTCTGCGACAATGGC 59.524 61.111 11.92 1.38 44.49 4.40
438 439 1.638388 ATGCGTGTCTGCGACAATGG 61.638 55.000 11.92 6.98 44.49 3.16
439 440 0.519792 CATGCGTGTCTGCGACAATG 60.520 55.000 11.92 9.21 44.49 2.82
440 441 1.638388 CCATGCGTGTCTGCGACAAT 61.638 55.000 11.92 1.93 44.49 2.71
441 442 2.316867 CCATGCGTGTCTGCGACAA 61.317 57.895 11.92 0.00 44.49 3.18
442 443 2.738139 CCATGCGTGTCTGCGACA 60.738 61.111 4.96 7.20 40.50 4.35
443 444 4.152625 GCCATGCGTGTCTGCGAC 62.153 66.667 4.96 2.32 37.81 5.19
444 445 4.678499 TGCCATGCGTGTCTGCGA 62.678 61.111 4.96 0.00 37.81 5.10
445 446 4.156622 CTGCCATGCGTGTCTGCG 62.157 66.667 4.96 0.00 37.81 5.18
446 447 2.110967 ATCTGCCATGCGTGTCTGC 61.111 57.895 4.96 1.81 0.00 4.26
447 448 1.022982 ACATCTGCCATGCGTGTCTG 61.023 55.000 4.96 0.00 0.00 3.51
448 449 0.536724 TACATCTGCCATGCGTGTCT 59.463 50.000 4.96 0.00 0.00 3.41
449 450 0.652592 GTACATCTGCCATGCGTGTC 59.347 55.000 4.96 0.00 0.00 3.67
450 451 1.083806 CGTACATCTGCCATGCGTGT 61.084 55.000 4.96 0.00 0.00 4.49
451 452 0.805711 TCGTACATCTGCCATGCGTG 60.806 55.000 0.00 0.00 0.00 5.34
452 453 0.806102 GTCGTACATCTGCCATGCGT 60.806 55.000 0.00 0.00 0.00 5.24
453 454 1.811217 CGTCGTACATCTGCCATGCG 61.811 60.000 0.00 0.00 0.00 4.73
454 455 0.527600 TCGTCGTACATCTGCCATGC 60.528 55.000 0.00 0.00 0.00 4.06
455 456 1.921243 TTCGTCGTACATCTGCCATG 58.079 50.000 0.00 0.00 0.00 3.66
456 457 2.665649 TTTCGTCGTACATCTGCCAT 57.334 45.000 0.00 0.00 0.00 4.40
457 458 2.267426 CATTTCGTCGTACATCTGCCA 58.733 47.619 0.00 0.00 0.00 4.92
458 459 1.004927 GCATTTCGTCGTACATCTGCC 60.005 52.381 0.00 0.00 0.00 4.85
459 460 1.658596 TGCATTTCGTCGTACATCTGC 59.341 47.619 0.00 0.00 0.00 4.26
460 461 5.635549 TTATGCATTTCGTCGTACATCTG 57.364 39.130 3.54 0.00 0.00 2.90
461 462 5.006358 GGTTTATGCATTTCGTCGTACATCT 59.994 40.000 3.54 0.00 0.00 2.90
462 463 5.195379 GGTTTATGCATTTCGTCGTACATC 58.805 41.667 3.54 0.00 0.00 3.06
463 464 4.632251 TGGTTTATGCATTTCGTCGTACAT 59.368 37.500 3.54 0.00 0.00 2.29
464 465 3.995048 TGGTTTATGCATTTCGTCGTACA 59.005 39.130 3.54 0.00 0.00 2.90
465 466 4.587211 TGGTTTATGCATTTCGTCGTAC 57.413 40.909 3.54 0.00 0.00 3.67
466 467 5.608676 TTTGGTTTATGCATTTCGTCGTA 57.391 34.783 3.54 0.00 0.00 3.43
467 468 4.491234 TTTGGTTTATGCATTTCGTCGT 57.509 36.364 3.54 0.00 0.00 4.34
468 469 4.201353 CGTTTTGGTTTATGCATTTCGTCG 60.201 41.667 3.54 0.00 0.00 5.12
469 470 4.677832 ACGTTTTGGTTTATGCATTTCGTC 59.322 37.500 3.54 0.00 0.00 4.20
470 471 4.612943 ACGTTTTGGTTTATGCATTTCGT 58.387 34.783 3.54 0.73 0.00 3.85
471 472 6.361214 ACTTACGTTTTGGTTTATGCATTTCG 59.639 34.615 3.54 0.12 0.00 3.46
472 473 7.631915 ACTTACGTTTTGGTTTATGCATTTC 57.368 32.000 3.54 0.00 0.00 2.17
473 474 8.426881 AAACTTACGTTTTGGTTTATGCATTT 57.573 26.923 3.54 0.00 40.30 2.32
474 475 8.970293 GTAAACTTACGTTTTGGTTTATGCATT 58.030 29.630 3.54 0.00 42.91 3.56
475 476 8.354426 AGTAAACTTACGTTTTGGTTTATGCAT 58.646 29.630 3.79 3.79 42.91 3.96
476 477 7.705214 AGTAAACTTACGTTTTGGTTTATGCA 58.295 30.769 2.36 0.00 42.91 3.96
477 478 7.324375 GGAGTAAACTTACGTTTTGGTTTATGC 59.676 37.037 2.36 2.27 42.91 3.14
478 479 7.531534 CGGAGTAAACTTACGTTTTGGTTTATG 59.468 37.037 2.36 0.00 42.91 1.90
479 480 7.226523 ACGGAGTAAACTTACGTTTTGGTTTAT 59.773 33.333 2.36 0.00 41.94 1.40
480 481 6.536941 ACGGAGTAAACTTACGTTTTGGTTTA 59.463 34.615 2.36 2.37 41.94 2.01
481 482 5.353956 ACGGAGTAAACTTACGTTTTGGTTT 59.646 36.000 2.36 3.36 41.94 3.27
482 483 4.875536 ACGGAGTAAACTTACGTTTTGGTT 59.124 37.500 2.36 0.00 41.94 3.67
483 484 4.441792 ACGGAGTAAACTTACGTTTTGGT 58.558 39.130 2.36 0.00 41.94 3.67
500 501 5.665459 ACTGATCTCCTAAATTTGACGGAG 58.335 41.667 19.17 19.17 43.44 4.63
501 502 5.677319 ACTGATCTCCTAAATTTGACGGA 57.323 39.130 0.00 3.50 0.00 4.69
502 503 7.265673 TCTAACTGATCTCCTAAATTTGACGG 58.734 38.462 0.00 0.00 0.00 4.79
503 504 8.596380 GTTCTAACTGATCTCCTAAATTTGACG 58.404 37.037 0.00 0.00 0.00 4.35
504 505 8.884726 GGTTCTAACTGATCTCCTAAATTTGAC 58.115 37.037 0.00 0.00 0.00 3.18
505 506 7.764443 CGGTTCTAACTGATCTCCTAAATTTGA 59.236 37.037 0.00 0.00 37.48 2.69
506 507 7.764443 TCGGTTCTAACTGATCTCCTAAATTTG 59.236 37.037 0.00 0.00 39.29 2.32
507 508 7.764901 GTCGGTTCTAACTGATCTCCTAAATTT 59.235 37.037 7.59 0.00 45.30 1.82
508 509 7.266400 GTCGGTTCTAACTGATCTCCTAAATT 58.734 38.462 7.59 0.00 45.30 1.82
509 510 6.183360 GGTCGGTTCTAACTGATCTCCTAAAT 60.183 42.308 7.59 0.00 45.30 1.40
510 511 5.126707 GGTCGGTTCTAACTGATCTCCTAAA 59.873 44.000 7.59 0.00 45.30 1.85
511 512 4.643784 GGTCGGTTCTAACTGATCTCCTAA 59.356 45.833 7.59 0.00 45.30 2.69
512 513 4.205587 GGTCGGTTCTAACTGATCTCCTA 58.794 47.826 7.59 0.00 45.30 2.94
513 514 3.025262 GGTCGGTTCTAACTGATCTCCT 58.975 50.000 7.59 0.00 45.30 3.69
514 515 2.758979 TGGTCGGTTCTAACTGATCTCC 59.241 50.000 14.39 8.94 45.30 3.71
515 516 4.451629 TTGGTCGGTTCTAACTGATCTC 57.548 45.455 14.39 6.23 45.30 2.75
516 517 4.283722 AGTTTGGTCGGTTCTAACTGATCT 59.716 41.667 14.39 4.41 45.30 2.75
517 518 4.566987 AGTTTGGTCGGTTCTAACTGATC 58.433 43.478 7.59 7.71 45.30 2.92
518 519 4.618920 AGTTTGGTCGGTTCTAACTGAT 57.381 40.909 7.59 0.00 45.30 2.90
519 520 4.411256 AAGTTTGGTCGGTTCTAACTGA 57.589 40.909 0.14 0.14 41.78 3.41
520 521 5.176958 CACTAAGTTTGGTCGGTTCTAACTG 59.823 44.000 0.00 0.00 36.62 3.16
521 522 5.295152 CACTAAGTTTGGTCGGTTCTAACT 58.705 41.667 0.00 0.00 0.00 2.24
522 523 4.450080 CCACTAAGTTTGGTCGGTTCTAAC 59.550 45.833 0.00 0.00 0.00 2.34
523 524 4.344679 TCCACTAAGTTTGGTCGGTTCTAA 59.655 41.667 0.00 0.00 35.42 2.10
524 525 3.896888 TCCACTAAGTTTGGTCGGTTCTA 59.103 43.478 0.00 0.00 35.42 2.10
525 526 2.701951 TCCACTAAGTTTGGTCGGTTCT 59.298 45.455 0.00 0.00 35.42 3.01
526 527 3.064931 CTCCACTAAGTTTGGTCGGTTC 58.935 50.000 0.00 0.00 35.42 3.62
527 528 2.436911 ACTCCACTAAGTTTGGTCGGTT 59.563 45.455 0.00 0.00 35.42 4.44
528 529 2.044758 ACTCCACTAAGTTTGGTCGGT 58.955 47.619 0.00 0.00 35.42 4.69
529 530 2.833631 ACTCCACTAAGTTTGGTCGG 57.166 50.000 0.00 0.00 35.42 4.79
530 531 5.535333 TCTTTACTCCACTAAGTTTGGTCG 58.465 41.667 0.00 0.00 35.42 4.79
531 532 8.312564 AGTATCTTTACTCCACTAAGTTTGGTC 58.687 37.037 0.00 0.00 33.18 4.02
532 533 8.203681 AGTATCTTTACTCCACTAAGTTTGGT 57.796 34.615 0.00 0.00 33.18 3.67
533 534 8.705048 GAGTATCTTTACTCCACTAAGTTTGG 57.295 38.462 2.40 0.00 45.82 3.28
546 547 9.187996 GAGTAACCTTAGTGGAGTATCTTTACT 57.812 37.037 0.00 0.00 41.45 2.24
547 548 8.127954 CGAGTAACCTTAGTGGAGTATCTTTAC 58.872 40.741 0.00 0.00 39.71 2.01
548 549 7.284034 CCGAGTAACCTTAGTGGAGTATCTTTA 59.716 40.741 0.00 0.00 39.71 1.85
549 550 6.096564 CCGAGTAACCTTAGTGGAGTATCTTT 59.903 42.308 0.00 0.00 39.71 2.52
550 551 5.593502 CCGAGTAACCTTAGTGGAGTATCTT 59.406 44.000 0.00 0.00 39.71 2.40
551 552 5.131784 CCGAGTAACCTTAGTGGAGTATCT 58.868 45.833 0.00 0.00 39.71 1.98
552 553 4.886489 ACCGAGTAACCTTAGTGGAGTATC 59.114 45.833 0.00 0.00 39.71 2.24
553 554 4.864726 ACCGAGTAACCTTAGTGGAGTAT 58.135 43.478 0.00 0.00 39.71 2.12
554 555 4.265073 GACCGAGTAACCTTAGTGGAGTA 58.735 47.826 0.00 0.00 39.71 2.59
555 556 3.087781 GACCGAGTAACCTTAGTGGAGT 58.912 50.000 0.00 0.00 39.71 3.85
556 557 2.097142 CGACCGAGTAACCTTAGTGGAG 59.903 54.545 0.00 0.00 39.71 3.86
557 558 2.086869 CGACCGAGTAACCTTAGTGGA 58.913 52.381 0.00 0.00 39.71 4.02
558 559 1.815003 ACGACCGAGTAACCTTAGTGG 59.185 52.381 0.00 0.00 42.93 4.00
559 560 4.260948 GGATACGACCGAGTAACCTTAGTG 60.261 50.000 0.00 0.00 36.82 2.74
560 561 3.879892 GGATACGACCGAGTAACCTTAGT 59.120 47.826 0.00 0.00 36.82 2.24
561 562 4.133078 AGGATACGACCGAGTAACCTTAG 58.867 47.826 8.06 0.00 44.26 2.18
562 563 4.130118 GAGGATACGACCGAGTAACCTTA 58.870 47.826 12.82 0.00 45.86 2.69
563 564 2.948315 GAGGATACGACCGAGTAACCTT 59.052 50.000 12.82 2.13 45.86 3.50
564 565 2.725221 AGGATACGACCGAGTAACCT 57.275 50.000 8.06 8.06 42.63 3.50
565 566 1.606189 GGAGGATACGACCGAGTAACC 59.394 57.143 0.00 0.00 46.39 2.85
566 567 2.570135 AGGAGGATACGACCGAGTAAC 58.430 52.381 0.00 0.00 46.39 2.50
567 568 3.287867 AAGGAGGATACGACCGAGTAA 57.712 47.619 0.00 0.00 46.39 2.24
568 569 3.287867 AAAGGAGGATACGACCGAGTA 57.712 47.619 0.00 0.00 46.39 2.59
569 570 2.140839 AAAGGAGGATACGACCGAGT 57.859 50.000 0.00 0.00 46.39 4.18
570 571 4.850347 AATAAAGGAGGATACGACCGAG 57.150 45.455 0.00 0.00 46.39 4.63
571 572 5.603170 AAAATAAAGGAGGATACGACCGA 57.397 39.130 0.00 0.00 46.39 4.69
591 592 6.127563 GGGCATTTCTAACCGATCCTTAAAAA 60.128 38.462 0.00 0.00 0.00 1.94
592 593 5.358725 GGGCATTTCTAACCGATCCTTAAAA 59.641 40.000 0.00 0.00 0.00 1.52
593 594 4.885325 GGGCATTTCTAACCGATCCTTAAA 59.115 41.667 0.00 0.00 0.00 1.52
594 595 4.165372 AGGGCATTTCTAACCGATCCTTAA 59.835 41.667 0.00 0.00 0.00 1.85
595 596 3.714798 AGGGCATTTCTAACCGATCCTTA 59.285 43.478 0.00 0.00 0.00 2.69
596 597 2.509964 AGGGCATTTCTAACCGATCCTT 59.490 45.455 0.00 0.00 0.00 3.36
597 598 2.127708 AGGGCATTTCTAACCGATCCT 58.872 47.619 0.00 0.00 0.00 3.24
598 599 2.640316 AGGGCATTTCTAACCGATCC 57.360 50.000 0.00 0.00 0.00 3.36
599 600 6.635030 AAATTAGGGCATTTCTAACCGATC 57.365 37.500 0.00 0.00 30.61 3.69
600 601 8.706322 ATTAAATTAGGGCATTTCTAACCGAT 57.294 30.769 0.00 0.00 30.61 4.18
601 602 8.528044 AATTAAATTAGGGCATTTCTAACCGA 57.472 30.769 0.00 0.00 30.61 4.69
602 603 7.865889 GGAATTAAATTAGGGCATTTCTAACCG 59.134 37.037 0.00 0.00 30.61 4.44
603 604 8.148351 GGGAATTAAATTAGGGCATTTCTAACC 58.852 37.037 0.00 0.00 30.61 2.85
604 605 8.924303 AGGGAATTAAATTAGGGCATTTCTAAC 58.076 33.333 0.00 0.00 30.61 2.34
605 606 9.143155 GAGGGAATTAAATTAGGGCATTTCTAA 57.857 33.333 0.00 0.00 0.00 2.10
606 607 8.285891 TGAGGGAATTAAATTAGGGCATTTCTA 58.714 33.333 0.00 0.00 0.00 2.10
607 608 7.069950 GTGAGGGAATTAAATTAGGGCATTTCT 59.930 37.037 0.00 0.00 0.00 2.52
608 609 7.147742 TGTGAGGGAATTAAATTAGGGCATTTC 60.148 37.037 0.00 0.00 0.00 2.17
609 610 6.671779 TGTGAGGGAATTAAATTAGGGCATTT 59.328 34.615 0.00 0.00 0.00 2.32
610 611 6.098266 GTGTGAGGGAATTAAATTAGGGCATT 59.902 38.462 0.00 0.00 0.00 3.56
611 612 5.598417 GTGTGAGGGAATTAAATTAGGGCAT 59.402 40.000 0.00 0.00 0.00 4.40
612 613 4.953579 GTGTGAGGGAATTAAATTAGGGCA 59.046 41.667 0.00 0.00 0.00 5.36
613 614 5.201243 AGTGTGAGGGAATTAAATTAGGGC 58.799 41.667 0.00 0.00 0.00 5.19
614 615 8.996651 AATAGTGTGAGGGAATTAAATTAGGG 57.003 34.615 0.00 0.00 0.00 3.53
617 618 9.116067 CGGAAATAGTGTGAGGGAATTAAATTA 57.884 33.333 0.00 0.00 0.00 1.40
618 619 7.832187 TCGGAAATAGTGTGAGGGAATTAAATT 59.168 33.333 0.00 0.00 0.00 1.82
619 620 7.343357 TCGGAAATAGTGTGAGGGAATTAAAT 58.657 34.615 0.00 0.00 0.00 1.40
620 621 6.713276 TCGGAAATAGTGTGAGGGAATTAAA 58.287 36.000 0.00 0.00 0.00 1.52
621 622 6.302535 TCGGAAATAGTGTGAGGGAATTAA 57.697 37.500 0.00 0.00 0.00 1.40
622 623 5.163343 CCTCGGAAATAGTGTGAGGGAATTA 60.163 44.000 0.00 0.00 42.00 1.40
623 624 4.384208 CCTCGGAAATAGTGTGAGGGAATT 60.384 45.833 0.00 0.00 42.00 2.17
624 625 3.134804 CCTCGGAAATAGTGTGAGGGAAT 59.865 47.826 0.00 0.00 42.00 3.01
625 626 2.500098 CCTCGGAAATAGTGTGAGGGAA 59.500 50.000 0.00 0.00 42.00 3.97
626 627 2.108168 CCTCGGAAATAGTGTGAGGGA 58.892 52.381 0.00 0.00 42.00 4.20
627 628 2.108168 TCCTCGGAAATAGTGTGAGGG 58.892 52.381 6.72 0.00 45.03 4.30
628 629 3.522553 GTTCCTCGGAAATAGTGTGAGG 58.477 50.000 0.00 0.12 46.06 3.86
629 630 3.056107 TGGTTCCTCGGAAATAGTGTGAG 60.056 47.826 0.00 0.00 35.75 3.51
630 631 2.901192 TGGTTCCTCGGAAATAGTGTGA 59.099 45.455 0.00 0.00 35.75 3.58
631 632 3.328382 TGGTTCCTCGGAAATAGTGTG 57.672 47.619 0.00 0.00 35.75 3.82
632 633 3.430374 CGATGGTTCCTCGGAAATAGTGT 60.430 47.826 0.00 0.00 35.75 3.55
633 634 3.123804 CGATGGTTCCTCGGAAATAGTG 58.876 50.000 0.00 0.00 35.75 2.74
634 635 3.028850 TCGATGGTTCCTCGGAAATAGT 58.971 45.455 0.00 0.00 36.78 2.12
635 636 3.318275 TCTCGATGGTTCCTCGGAAATAG 59.682 47.826 0.00 0.00 36.78 1.73
636 637 3.293337 TCTCGATGGTTCCTCGGAAATA 58.707 45.455 0.00 0.00 36.78 1.40
637 638 2.108168 TCTCGATGGTTCCTCGGAAAT 58.892 47.619 0.00 0.00 36.78 2.17
638 639 1.552578 TCTCGATGGTTCCTCGGAAA 58.447 50.000 0.00 0.00 36.78 3.13
639 640 1.552578 TTCTCGATGGTTCCTCGGAA 58.447 50.000 0.00 0.00 36.78 4.30
640 641 1.552578 TTTCTCGATGGTTCCTCGGA 58.447 50.000 0.00 0.00 36.78 4.55
641 642 2.604046 ATTTCTCGATGGTTCCTCGG 57.396 50.000 0.00 0.00 36.78 4.63
642 643 4.051922 CCTTATTTCTCGATGGTTCCTCG 58.948 47.826 0.00 5.00 37.47 4.63
643 644 4.101119 TCCCTTATTTCTCGATGGTTCCTC 59.899 45.833 0.00 0.00 0.00 3.71
644 645 4.037927 TCCCTTATTTCTCGATGGTTCCT 58.962 43.478 0.00 0.00 0.00 3.36
645 646 4.417426 TCCCTTATTTCTCGATGGTTCC 57.583 45.455 0.00 0.00 0.00 3.62
646 647 4.998033 GGATCCCTTATTTCTCGATGGTTC 59.002 45.833 0.00 0.00 0.00 3.62
647 648 4.503296 CGGATCCCTTATTTCTCGATGGTT 60.503 45.833 6.06 0.00 0.00 3.67
648 649 3.006967 CGGATCCCTTATTTCTCGATGGT 59.993 47.826 6.06 0.00 0.00 3.55
649 650 3.589988 CGGATCCCTTATTTCTCGATGG 58.410 50.000 6.06 0.00 0.00 3.51
650 651 3.006967 ACCGGATCCCTTATTTCTCGATG 59.993 47.826 9.46 0.00 0.00 3.84
806 807 4.339872 TTTTCGGTGGTGAGCTAAACTA 57.660 40.909 0.00 0.00 0.00 2.24
859 860 3.891422 TTAAGAAAATACCCTCGGCGA 57.109 42.857 10.14 10.14 0.00 5.54
964 969 2.818274 GGCGGCCACGGTAGAAAG 60.818 66.667 15.62 0.00 41.36 2.62
965 970 4.745751 CGGCGGCCACGGTAGAAA 62.746 66.667 20.71 0.00 41.36 2.52
981 986 3.787001 GTGGAAGGGGAGGGAGCG 61.787 72.222 0.00 0.00 0.00 5.03
982 987 3.412408 GGTGGAAGGGGAGGGAGC 61.412 72.222 0.00 0.00 0.00 4.70
983 988 1.308216 ATGGTGGAAGGGGAGGGAG 60.308 63.158 0.00 0.00 0.00 4.30
984 989 1.619363 CATGGTGGAAGGGGAGGGA 60.619 63.158 0.00 0.00 0.00 4.20
985 990 2.693871 CCATGGTGGAAGGGGAGGG 61.694 68.421 2.57 0.00 40.96 4.30
986 991 3.010144 CCATGGTGGAAGGGGAGG 58.990 66.667 2.57 0.00 40.96 4.30
987 992 2.276740 GCCATGGTGGAAGGGGAG 59.723 66.667 14.67 0.00 40.96 4.30
988 993 3.346734 GGCCATGGTGGAAGGGGA 61.347 66.667 14.67 0.00 40.96 4.81
989 994 4.820744 CGGCCATGGTGGAAGGGG 62.821 72.222 14.67 0.00 40.96 4.79
1096 1140 3.709633 AGGAGGCGATGCAGTGCA 61.710 61.111 22.22 22.22 44.86 4.57
1150 1530 4.887190 GTTGGCCGTGGTGGTGGT 62.887 66.667 0.00 0.00 41.21 4.16
1262 1642 4.752879 GTTAGCCGAGGCCGTGCA 62.753 66.667 10.95 0.00 43.17 4.57
1286 1666 2.602267 TGGACCGGTGATCGTGGT 60.602 61.111 14.63 3.24 39.12 4.16
1458 1840 2.167281 CGAGCATTCTTCTTCCTGGAGA 59.833 50.000 0.00 0.00 0.00 3.71
1473 1855 2.492090 GCGTCTCACCTCGAGCAT 59.508 61.111 6.99 0.00 41.98 3.79
1507 1889 1.456287 GGCACTCACCTCCACCTTT 59.544 57.895 0.00 0.00 0.00 3.11
1588 1985 4.627035 CACACACACACACTGACCTATATG 59.373 45.833 0.00 0.00 0.00 1.78
1589 1986 4.283467 ACACACACACACACTGACCTATAT 59.717 41.667 0.00 0.00 0.00 0.86
1590 1987 3.639561 ACACACACACACACTGACCTATA 59.360 43.478 0.00 0.00 0.00 1.31
1591 1988 2.434336 ACACACACACACACTGACCTAT 59.566 45.455 0.00 0.00 0.00 2.57
1592 1989 1.828595 ACACACACACACACTGACCTA 59.171 47.619 0.00 0.00 0.00 3.08
1593 1990 0.613260 ACACACACACACACTGACCT 59.387 50.000 0.00 0.00 0.00 3.85
1594 1991 0.726827 CACACACACACACACTGACC 59.273 55.000 0.00 0.00 0.00 4.02
1595 1992 1.128507 CACACACACACACACACTGAC 59.871 52.381 0.00 0.00 0.00 3.51
1596 1993 1.437625 CACACACACACACACACTGA 58.562 50.000 0.00 0.00 0.00 3.41
1597 1994 0.179192 GCACACACACACACACACTG 60.179 55.000 0.00 0.00 0.00 3.66
1598 1995 0.605050 TGCACACACACACACACACT 60.605 50.000 0.00 0.00 0.00 3.55
1599 1996 0.179192 CTGCACACACACACACACAC 60.179 55.000 0.00 0.00 0.00 3.82
1600 1997 1.921045 GCTGCACACACACACACACA 61.921 55.000 0.00 0.00 0.00 3.72
1605 2002 2.025156 GCTGCTGCACACACACAC 59.975 61.111 11.11 0.00 39.41 3.82
1629 2026 1.278238 GCTACCTTGATGTTCGTCCG 58.722 55.000 0.00 0.00 0.00 4.79
1916 2414 5.978919 TGTCATGCAATCTTTTTGAACTCAC 59.021 36.000 0.00 0.00 0.00 3.51
2001 2501 3.282745 GAAGCACGACCTCGAGGCA 62.283 63.158 31.56 0.00 42.28 4.75
2030 2530 3.855154 GCACACAAACACACACACAGAAA 60.855 43.478 0.00 0.00 0.00 2.52
2031 2531 2.351253 GCACACAAACACACACACAGAA 60.351 45.455 0.00 0.00 0.00 3.02
2035 2535 1.402479 GCGCACACAAACACACACAC 61.402 55.000 0.30 0.00 0.00 3.82
2039 2539 2.099446 ACGCGCACACAAACACAC 59.901 55.556 5.73 0.00 0.00 3.82
2108 2612 0.390603 CACGAATCAAGGGCCGTACA 60.391 55.000 0.00 0.00 33.62 2.90
2166 2670 2.017559 GACCCTTCGAGCATAGCCGT 62.018 60.000 0.00 0.00 0.00 5.68
2175 2679 1.293498 CTGGTGGTGACCCTTCGAG 59.707 63.158 0.00 0.00 42.34 4.04
2204 2708 1.081277 GGAGAGGGAAGGGAGGTGT 59.919 63.158 0.00 0.00 0.00 4.16
2206 2710 2.788589 GGGAGAGGGAAGGGAGGT 59.211 66.667 0.00 0.00 0.00 3.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.