Multiple sequence alignment - TraesCS4A01G419500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G419500 chr4A 100.000 4683 0 0 1 4683 690107416 690102734 0.000000e+00 8648
1 TraesCS4A01G419500 chr4A 89.130 506 40 10 217 709 689836845 689837348 2.390000e-172 616
2 TraesCS4A01G419500 chr4A 83.710 442 36 19 276 683 689646124 689646563 7.350000e-103 385
3 TraesCS4A01G419500 chr4A 88.462 208 14 7 2 208 689645564 689645762 4.680000e-60 243
4 TraesCS4A01G419500 chr4A 100.000 107 0 0 758 864 690101538 690101644 1.030000e-46 198
5 TraesCS4A01G419500 chr4A 89.583 144 10 4 1 142 689835071 689835211 1.340000e-40 178
6 TraesCS4A01G419500 chr7B 99.847 3926 6 0 758 4683 571591141 571595066 0.000000e+00 7217
7 TraesCS4A01G419500 chr7B 84.197 1177 180 6 2015 3188 34222236 34223409 0.000000e+00 1138
8 TraesCS4A01G419500 chr7B 100.000 107 0 0 758 864 571596261 571596155 1.030000e-46 198
9 TraesCS4A01G419500 chr6A 99.618 3930 14 1 754 4683 584918303 584922231 0.000000e+00 7173
10 TraesCS4A01G419500 chr6A 91.185 1350 99 9 758 2105 273733070 273734401 0.000000e+00 1816
11 TraesCS4A01G419500 chr6A 100.000 89 0 0 776 864 584923408 584923320 1.040000e-36 165
12 TraesCS4A01G419500 chr2A 87.985 2447 241 33 763 3185 762298965 762296548 0.000000e+00 2841
13 TraesCS4A01G419500 chr2A 92.635 1317 79 7 3295 4598 762296349 762295038 0.000000e+00 1879
14 TraesCS4A01G419500 chr3B 87.602 2452 253 33 758 3184 52924722 52927147 0.000000e+00 2796
15 TraesCS4A01G419500 chr3B 91.968 1357 90 9 3253 4595 52927435 52928786 0.000000e+00 1884
16 TraesCS4A01G419500 chr3B 91.968 1357 90 9 3253 4595 160143690 160145041 0.000000e+00 1884
17 TraesCS4A01G419500 chr3B 94.451 901 50 0 2285 3185 160142503 160143403 0.000000e+00 1387
18 TraesCS4A01G419500 chr3B 81.835 1068 141 35 758 1799 160141470 160142510 0.000000e+00 848
19 TraesCS4A01G419500 chr3A 91.826 1358 90 12 3253 4595 174280531 174281882 0.000000e+00 1873
20 TraesCS4A01G419500 chr3A 94.118 901 53 0 2285 3185 174279344 174280244 0.000000e+00 1371
21 TraesCS4A01G419500 chr3A 82.090 1072 139 34 754 1799 174278307 174279351 0.000000e+00 867
22 TraesCS4A01G419500 chr1B 85.172 1106 162 2 2075 3179 420604527 420603423 0.000000e+00 1133
23 TraesCS4A01G419500 chr1B 77.912 1159 204 35 976 2101 551220007 551218868 0.000000e+00 675
24 TraesCS4A01G419500 chr2B 82.550 1255 188 24 3297 4527 23573838 23572591 0.000000e+00 1075
25 TraesCS4A01G419500 chr2B 81.331 1232 203 19 3315 4527 12080579 12079356 0.000000e+00 976
26 TraesCS4A01G419500 chr7D 83.036 1179 192 7 2024 3200 2486778 2485606 0.000000e+00 1062
27 TraesCS4A01G419500 chr7D 87.609 460 35 14 313 760 35192797 35192348 8.990000e-142 514
28 TraesCS4A01G419500 chr7D 86.400 125 14 1 4395 4519 19558361 19558482 2.940000e-27 134
29 TraesCS4A01G419500 chr6B 83.284 1011 156 11 3295 4299 63421290 63420287 0.000000e+00 918
30 TraesCS4A01G419500 chr6B 78.769 1154 215 22 764 1899 666827760 666826619 0.000000e+00 747
31 TraesCS4A01G419500 chr7A 87.327 434 30 11 341 760 35405495 35405073 1.530000e-129 473
32 TraesCS4A01G419500 chr7A 80.942 446 33 27 276 683 35378301 35378732 5.890000e-79 305
33 TraesCS4A01G419500 chr7A 89.423 208 13 5 2 208 35377739 35377938 2.160000e-63 254
34 TraesCS4A01G419500 chr5D 84.848 462 55 9 4067 4519 532749209 532749664 7.150000e-123 451


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G419500 chr4A 690102734 690107416 4682 True 8648.000000 8648 100.000000 1 4683 1 chr4A.!!$R1 4682
1 TraesCS4A01G419500 chr4A 689835071 689837348 2277 False 397.000000 616 89.356500 1 709 2 chr4A.!!$F3 708
2 TraesCS4A01G419500 chr4A 689645564 689646563 999 False 314.000000 385 86.086000 2 683 2 chr4A.!!$F2 681
3 TraesCS4A01G419500 chr7B 571591141 571595066 3925 False 7217.000000 7217 99.847000 758 4683 1 chr7B.!!$F2 3925
4 TraesCS4A01G419500 chr7B 34222236 34223409 1173 False 1138.000000 1138 84.197000 2015 3188 1 chr7B.!!$F1 1173
5 TraesCS4A01G419500 chr6A 584918303 584922231 3928 False 7173.000000 7173 99.618000 754 4683 1 chr6A.!!$F2 3929
6 TraesCS4A01G419500 chr6A 273733070 273734401 1331 False 1816.000000 1816 91.185000 758 2105 1 chr6A.!!$F1 1347
7 TraesCS4A01G419500 chr2A 762295038 762298965 3927 True 2360.000000 2841 90.310000 763 4598 2 chr2A.!!$R1 3835
8 TraesCS4A01G419500 chr3B 52924722 52928786 4064 False 2340.000000 2796 89.785000 758 4595 2 chr3B.!!$F1 3837
9 TraesCS4A01G419500 chr3B 160141470 160145041 3571 False 1373.000000 1884 89.418000 758 4595 3 chr3B.!!$F2 3837
10 TraesCS4A01G419500 chr3A 174278307 174281882 3575 False 1370.333333 1873 89.344667 754 4595 3 chr3A.!!$F1 3841
11 TraesCS4A01G419500 chr1B 420603423 420604527 1104 True 1133.000000 1133 85.172000 2075 3179 1 chr1B.!!$R1 1104
12 TraesCS4A01G419500 chr1B 551218868 551220007 1139 True 675.000000 675 77.912000 976 2101 1 chr1B.!!$R2 1125
13 TraesCS4A01G419500 chr2B 23572591 23573838 1247 True 1075.000000 1075 82.550000 3297 4527 1 chr2B.!!$R2 1230
14 TraesCS4A01G419500 chr2B 12079356 12080579 1223 True 976.000000 976 81.331000 3315 4527 1 chr2B.!!$R1 1212
15 TraesCS4A01G419500 chr7D 2485606 2486778 1172 True 1062.000000 1062 83.036000 2024 3200 1 chr7D.!!$R1 1176
16 TraesCS4A01G419500 chr6B 63420287 63421290 1003 True 918.000000 918 83.284000 3295 4299 1 chr6B.!!$R1 1004
17 TraesCS4A01G419500 chr6B 666826619 666827760 1141 True 747.000000 747 78.769000 764 1899 1 chr6B.!!$R2 1135
18 TraesCS4A01G419500 chr7A 35377739 35378732 993 False 279.500000 305 85.182500 2 683 2 chr7A.!!$F1 681

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
241 243 0.031994 GGAGTTTGCACAATTGGCGT 59.968 50.0 10.83 0.0 0.0 5.68 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
4010 5885 4.017037 TCTCTCCTGTCCTTCTACTGGATT 60.017 45.833 3.5 0.0 43.84 3.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
47 49 7.769272 TTTTCATGTTTGAACAATGTTCCTC 57.231 32.000 21.75 12.78 41.50 3.71
48 50 6.713762 TTCATGTTTGAACAATGTTCCTCT 57.286 33.333 21.75 1.54 43.03 3.69
49 51 6.713762 TCATGTTTGAACAATGTTCCTCTT 57.286 33.333 21.75 8.64 43.03 2.85
53 55 9.311916 CATGTTTGAACAATGTTCCTCTTAAAA 57.688 29.630 21.75 12.09 43.03 1.52
82 84 8.867112 TTTATGTCTGAACACTATATTCCGAC 57.133 34.615 3.27 3.27 39.44 4.79
139 141 6.952773 TTTCTGTGTTTAAACTGTATGCCT 57.047 33.333 18.72 0.00 0.00 4.75
140 142 6.952773 TTCTGTGTTTAAACTGTATGCCTT 57.047 33.333 18.72 0.00 0.00 4.35
141 143 6.952773 TCTGTGTTTAAACTGTATGCCTTT 57.047 33.333 18.72 0.00 0.00 3.11
142 144 8.453238 TTCTGTGTTTAAACTGTATGCCTTTA 57.547 30.769 18.72 0.00 0.00 1.85
143 145 8.094798 TCTGTGTTTAAACTGTATGCCTTTAG 57.905 34.615 18.72 2.50 0.00 1.85
144 146 7.934665 TCTGTGTTTAAACTGTATGCCTTTAGA 59.065 33.333 18.72 4.37 0.00 2.10
145 147 8.094798 TGTGTTTAAACTGTATGCCTTTAGAG 57.905 34.615 18.72 0.00 0.00 2.43
146 148 7.717875 TGTGTTTAAACTGTATGCCTTTAGAGT 59.282 33.333 18.72 0.00 0.00 3.24
147 149 9.211485 GTGTTTAAACTGTATGCCTTTAGAGTA 57.789 33.333 18.72 0.00 0.00 2.59
148 150 9.953565 TGTTTAAACTGTATGCCTTTAGAGTAT 57.046 29.630 18.72 0.00 0.00 2.12
154 156 9.515226 AACTGTATGCCTTTAGAGTATTTTTCA 57.485 29.630 0.00 0.00 0.00 2.69
155 157 9.167311 ACTGTATGCCTTTAGAGTATTTTTCAG 57.833 33.333 0.00 0.00 0.00 3.02
156 158 9.383519 CTGTATGCCTTTAGAGTATTTTTCAGA 57.616 33.333 0.00 0.00 0.00 3.27
157 159 9.905713 TGTATGCCTTTAGAGTATTTTTCAGAT 57.094 29.630 0.00 0.00 0.00 2.90
161 163 8.522830 TGCCTTTAGAGTATTTTTCAGATTTGG 58.477 33.333 0.00 0.00 0.00 3.28
162 164 8.523658 GCCTTTAGAGTATTTTTCAGATTTGGT 58.476 33.333 0.00 0.00 0.00 3.67
189 191 4.890158 AAAATGAGGGGAAATGTTGACC 57.110 40.909 0.00 0.00 0.00 4.02
190 192 2.128771 ATGAGGGGAAATGTTGACCG 57.871 50.000 0.00 0.00 0.00 4.79
191 193 0.037590 TGAGGGGAAATGTTGACCGG 59.962 55.000 0.00 0.00 0.00 5.28
192 194 1.304134 AGGGGAAATGTTGACCGGC 60.304 57.895 0.00 0.00 0.00 6.13
193 195 1.304134 GGGGAAATGTTGACCGGCT 60.304 57.895 0.00 0.00 0.00 5.52
194 196 0.034863 GGGGAAATGTTGACCGGCTA 60.035 55.000 0.00 0.00 0.00 3.93
195 197 1.614850 GGGGAAATGTTGACCGGCTAA 60.615 52.381 0.00 0.00 0.00 3.09
196 198 2.164338 GGGAAATGTTGACCGGCTAAA 58.836 47.619 0.00 0.00 0.00 1.85
197 199 2.758423 GGGAAATGTTGACCGGCTAAAT 59.242 45.455 0.00 0.00 0.00 1.40
198 200 3.428862 GGGAAATGTTGACCGGCTAAATG 60.429 47.826 0.00 0.00 0.00 2.32
199 201 3.192633 GGAAATGTTGACCGGCTAAATGT 59.807 43.478 0.00 0.00 0.00 2.71
200 202 3.848272 AATGTTGACCGGCTAAATGTG 57.152 42.857 0.00 0.00 0.00 3.21
201 203 1.529226 TGTTGACCGGCTAAATGTGG 58.471 50.000 0.00 0.00 0.00 4.17
202 204 0.808755 GTTGACCGGCTAAATGTGGG 59.191 55.000 0.00 0.00 0.00 4.61
203 205 0.693622 TTGACCGGCTAAATGTGGGA 59.306 50.000 0.00 0.00 0.00 4.37
204 206 0.251916 TGACCGGCTAAATGTGGGAG 59.748 55.000 0.00 0.00 0.00 4.30
205 207 0.463833 GACCGGCTAAATGTGGGAGG 60.464 60.000 0.00 0.00 0.00 4.30
206 208 0.912487 ACCGGCTAAATGTGGGAGGA 60.912 55.000 0.00 0.00 0.00 3.71
207 209 0.463833 CCGGCTAAATGTGGGAGGAC 60.464 60.000 0.00 0.00 0.00 3.85
208 210 0.541863 CGGCTAAATGTGGGAGGACT 59.458 55.000 0.00 0.00 0.00 3.85
209 211 1.760613 CGGCTAAATGTGGGAGGACTA 59.239 52.381 0.00 0.00 0.00 2.59
210 212 2.169769 CGGCTAAATGTGGGAGGACTAA 59.830 50.000 0.00 0.00 0.00 2.24
211 213 3.741388 CGGCTAAATGTGGGAGGACTAAG 60.741 52.174 0.00 0.00 0.00 2.18
212 214 3.206964 GCTAAATGTGGGAGGACTAAGC 58.793 50.000 0.00 0.00 0.00 3.09
213 215 2.403252 AAATGTGGGAGGACTAAGCG 57.597 50.000 0.00 0.00 0.00 4.68
214 216 0.541863 AATGTGGGAGGACTAAGCGG 59.458 55.000 0.00 0.00 0.00 5.52
215 217 0.617820 ATGTGGGAGGACTAAGCGGT 60.618 55.000 0.00 0.00 0.00 5.68
216 218 1.255667 TGTGGGAGGACTAAGCGGTC 61.256 60.000 0.00 0.11 35.66 4.79
217 219 1.077805 TGGGAGGACTAAGCGGTCA 59.922 57.895 9.07 0.00 37.91 4.02
218 220 1.255667 TGGGAGGACTAAGCGGTCAC 61.256 60.000 9.07 3.83 37.91 3.67
219 221 1.516423 GGAGGACTAAGCGGTCACC 59.484 63.158 9.07 0.00 37.91 4.02
220 222 0.971447 GGAGGACTAAGCGGTCACCT 60.971 60.000 0.00 0.00 37.91 4.00
221 223 1.684248 GGAGGACTAAGCGGTCACCTA 60.684 57.143 0.00 0.00 37.91 3.08
222 224 1.677052 GAGGACTAAGCGGTCACCTAG 59.323 57.143 0.00 0.00 37.91 3.02
223 225 0.745468 GGACTAAGCGGTCACCTAGG 59.255 60.000 7.41 7.41 37.91 3.02
224 226 1.684248 GGACTAAGCGGTCACCTAGGA 60.684 57.143 17.98 0.00 37.91 2.94
225 227 1.677052 GACTAAGCGGTCACCTAGGAG 59.323 57.143 17.98 8.08 36.35 3.69
226 228 1.005687 ACTAAGCGGTCACCTAGGAGT 59.994 52.381 17.98 1.49 0.00 3.85
227 229 2.100989 CTAAGCGGTCACCTAGGAGTT 58.899 52.381 17.98 0.00 0.00 3.01
228 230 1.349067 AAGCGGTCACCTAGGAGTTT 58.651 50.000 17.98 2.79 0.00 2.66
229 231 0.608640 AGCGGTCACCTAGGAGTTTG 59.391 55.000 17.98 2.82 0.00 2.93
230 232 1.019805 GCGGTCACCTAGGAGTTTGC 61.020 60.000 17.98 9.96 0.00 3.68
231 233 0.320374 CGGTCACCTAGGAGTTTGCA 59.680 55.000 17.98 0.00 0.00 4.08
232 234 1.809684 GGTCACCTAGGAGTTTGCAC 58.190 55.000 17.98 0.77 0.00 4.57
233 235 1.071699 GGTCACCTAGGAGTTTGCACA 59.928 52.381 17.98 0.00 0.00 4.57
234 236 2.486548 GGTCACCTAGGAGTTTGCACAA 60.487 50.000 17.98 0.00 0.00 3.33
235 237 3.412386 GTCACCTAGGAGTTTGCACAAT 58.588 45.455 17.98 0.00 0.00 2.71
236 238 3.821033 GTCACCTAGGAGTTTGCACAATT 59.179 43.478 17.98 0.00 0.00 2.32
237 239 3.820467 TCACCTAGGAGTTTGCACAATTG 59.180 43.478 17.98 3.24 0.00 2.32
238 240 3.057315 CACCTAGGAGTTTGCACAATTGG 60.057 47.826 17.98 0.00 0.00 3.16
239 241 2.094545 CCTAGGAGTTTGCACAATTGGC 60.095 50.000 10.83 10.82 0.00 4.52
240 242 0.314935 AGGAGTTTGCACAATTGGCG 59.685 50.000 10.83 1.38 0.00 5.69
241 243 0.031994 GGAGTTTGCACAATTGGCGT 59.968 50.000 10.83 0.00 0.00 5.68
242 244 1.408422 GAGTTTGCACAATTGGCGTC 58.592 50.000 10.83 5.36 0.00 5.19
243 245 0.743688 AGTTTGCACAATTGGCGTCA 59.256 45.000 10.83 0.00 0.00 4.35
244 246 0.852136 GTTTGCACAATTGGCGTCAC 59.148 50.000 10.83 5.13 0.00 3.67
245 247 0.457443 TTTGCACAATTGGCGTCACA 59.543 45.000 10.83 0.00 0.00 3.58
246 248 0.248825 TTGCACAATTGGCGTCACAC 60.249 50.000 10.83 0.00 0.00 3.82
247 249 1.358402 GCACAATTGGCGTCACACA 59.642 52.632 10.83 0.00 0.00 3.72
248 250 0.934436 GCACAATTGGCGTCACACAC 60.934 55.000 10.83 0.00 0.00 3.82
259 261 3.585748 CGTCACACACGTTTCATCTTT 57.414 42.857 0.00 0.00 44.07 2.52
260 262 3.935450 CGTCACACACGTTTCATCTTTT 58.065 40.909 0.00 0.00 44.07 2.27
261 263 5.073192 CGTCACACACGTTTCATCTTTTA 57.927 39.130 0.00 0.00 44.07 1.52
262 264 5.494618 CGTCACACACGTTTCATCTTTTAA 58.505 37.500 0.00 0.00 44.07 1.52
263 265 5.960683 CGTCACACACGTTTCATCTTTTAAA 59.039 36.000 0.00 0.00 44.07 1.52
264 266 6.466413 CGTCACACACGTTTCATCTTTTAAAA 59.534 34.615 0.00 0.00 44.07 1.52
265 267 7.510896 CGTCACACACGTTTCATCTTTTAAAAC 60.511 37.037 0.00 0.00 44.07 2.43
266 268 6.748198 TCACACACGTTTCATCTTTTAAAACC 59.252 34.615 0.00 0.00 30.84 3.27
267 269 6.528423 CACACACGTTTCATCTTTTAAAACCA 59.472 34.615 0.00 0.00 30.84 3.67
268 270 7.221838 CACACACGTTTCATCTTTTAAAACCAT 59.778 33.333 0.00 0.00 30.84 3.55
269 271 7.434013 ACACACGTTTCATCTTTTAAAACCATC 59.566 33.333 0.00 0.00 30.84 3.51
270 272 7.647715 CACACGTTTCATCTTTTAAAACCATCT 59.352 33.333 0.00 0.00 30.84 2.90
271 273 7.860872 ACACGTTTCATCTTTTAAAACCATCTC 59.139 33.333 0.00 0.00 30.84 2.75
272 274 7.860373 CACGTTTCATCTTTTAAAACCATCTCA 59.140 33.333 0.00 0.00 30.84 3.27
273 275 8.576442 ACGTTTCATCTTTTAAAACCATCTCAT 58.424 29.630 0.00 0.00 30.84 2.90
274 276 8.853345 CGTTTCATCTTTTAAAACCATCTCATG 58.147 33.333 0.00 0.00 30.84 3.07
275 277 8.650714 GTTTCATCTTTTAAAACCATCTCATGC 58.349 33.333 0.00 0.00 0.00 4.06
276 278 7.707624 TCATCTTTTAAAACCATCTCATGCT 57.292 32.000 0.00 0.00 0.00 3.79
277 279 7.765307 TCATCTTTTAAAACCATCTCATGCTC 58.235 34.615 0.00 0.00 0.00 4.26
278 280 6.515272 TCTTTTAAAACCATCTCATGCTCC 57.485 37.500 0.00 0.00 0.00 4.70
279 281 6.009589 TCTTTTAAAACCATCTCATGCTCCA 58.990 36.000 0.00 0.00 0.00 3.86
280 282 6.493115 TCTTTTAAAACCATCTCATGCTCCAA 59.507 34.615 0.00 0.00 0.00 3.53
281 283 5.902613 TTAAAACCATCTCATGCTCCAAG 57.097 39.130 0.00 0.00 0.00 3.61
282 284 2.431954 AACCATCTCATGCTCCAAGG 57.568 50.000 0.00 0.00 0.00 3.61
283 285 1.588239 ACCATCTCATGCTCCAAGGA 58.412 50.000 0.00 0.00 0.00 3.36
284 286 1.918262 ACCATCTCATGCTCCAAGGAA 59.082 47.619 0.00 0.00 0.00 3.36
285 287 2.309755 ACCATCTCATGCTCCAAGGAAA 59.690 45.455 0.00 0.00 0.00 3.13
286 288 3.245371 ACCATCTCATGCTCCAAGGAAAA 60.245 43.478 0.00 0.00 0.00 2.29
287 289 3.958798 CCATCTCATGCTCCAAGGAAAAT 59.041 43.478 0.00 0.00 0.00 1.82
288 290 4.404715 CCATCTCATGCTCCAAGGAAAATT 59.595 41.667 0.00 0.00 0.00 1.82
289 291 5.348986 CATCTCATGCTCCAAGGAAAATTG 58.651 41.667 0.00 0.00 0.00 2.32
290 292 3.194116 TCTCATGCTCCAAGGAAAATTGC 59.806 43.478 0.00 0.00 0.00 3.56
291 293 2.094597 TCATGCTCCAAGGAAAATTGCG 60.095 45.455 0.00 0.00 0.00 4.85
292 294 0.038343 TGCTCCAAGGAAAATTGCGC 60.038 50.000 0.00 0.00 0.00 6.09
293 295 0.038343 GCTCCAAGGAAAATTGCGCA 60.038 50.000 5.66 5.66 0.00 6.09
294 296 1.986698 CTCCAAGGAAAATTGCGCAG 58.013 50.000 11.31 0.00 0.00 5.18
295 297 1.270550 CTCCAAGGAAAATTGCGCAGT 59.729 47.619 11.31 4.28 0.00 4.40
296 298 1.686052 TCCAAGGAAAATTGCGCAGTT 59.314 42.857 12.89 12.89 0.00 3.16
297 299 1.794116 CCAAGGAAAATTGCGCAGTTG 59.206 47.619 19.44 5.98 0.00 3.16
298 300 2.545532 CCAAGGAAAATTGCGCAGTTGA 60.546 45.455 19.44 0.00 0.00 3.18
299 301 2.712057 AGGAAAATTGCGCAGTTGAG 57.288 45.000 19.44 0.00 0.00 3.02
300 302 1.956477 AGGAAAATTGCGCAGTTGAGT 59.044 42.857 19.44 7.63 0.00 3.41
301 303 3.146066 AGGAAAATTGCGCAGTTGAGTA 58.854 40.909 19.44 0.00 0.00 2.59
302 304 3.058224 AGGAAAATTGCGCAGTTGAGTAC 60.058 43.478 19.44 8.45 0.00 2.73
303 305 2.989422 AAATTGCGCAGTTGAGTACC 57.011 45.000 19.44 0.00 0.00 3.34
304 306 1.165270 AATTGCGCAGTTGAGTACCC 58.835 50.000 18.03 0.00 0.00 3.69
305 307 1.019278 ATTGCGCAGTTGAGTACCCG 61.019 55.000 11.31 0.00 0.00 5.28
306 308 2.089887 TTGCGCAGTTGAGTACCCGA 62.090 55.000 11.31 0.00 0.00 5.14
307 309 1.373748 GCGCAGTTGAGTACCCGAA 60.374 57.895 0.30 0.00 0.00 4.30
308 310 1.623973 GCGCAGTTGAGTACCCGAAC 61.624 60.000 0.30 0.00 0.00 3.95
309 311 1.342082 CGCAGTTGAGTACCCGAACG 61.342 60.000 0.00 0.00 0.00 3.95
310 312 0.319297 GCAGTTGAGTACCCGAACGT 60.319 55.000 0.00 0.00 0.00 3.99
311 313 1.694639 CAGTTGAGTACCCGAACGTC 58.305 55.000 0.00 0.00 0.00 4.34
312 314 1.001048 CAGTTGAGTACCCGAACGTCA 60.001 52.381 0.00 0.00 0.00 4.35
313 315 1.682854 AGTTGAGTACCCGAACGTCAA 59.317 47.619 0.00 0.00 0.00 3.18
314 316 2.298163 AGTTGAGTACCCGAACGTCAAT 59.702 45.455 0.00 0.00 30.27 2.57
315 317 3.507233 AGTTGAGTACCCGAACGTCAATA 59.493 43.478 0.00 0.00 30.27 1.90
316 318 4.159135 AGTTGAGTACCCGAACGTCAATAT 59.841 41.667 0.00 0.00 30.27 1.28
317 319 4.724074 TGAGTACCCGAACGTCAATATT 57.276 40.909 0.00 0.00 0.00 1.28
318 320 4.426416 TGAGTACCCGAACGTCAATATTG 58.574 43.478 9.29 9.29 0.00 1.90
319 321 3.192466 AGTACCCGAACGTCAATATTGC 58.808 45.455 10.76 5.33 0.00 3.56
320 322 1.003851 ACCCGAACGTCAATATTGCG 58.996 50.000 22.24 22.24 35.13 4.85
321 323 0.315869 CCCGAACGTCAATATTGCGC 60.316 55.000 23.18 0.00 33.29 6.09
322 324 0.650512 CCGAACGTCAATATTGCGCT 59.349 50.000 23.18 15.88 33.29 5.92
323 325 1.592110 CCGAACGTCAATATTGCGCTG 60.592 52.381 23.18 15.98 33.29 5.18
324 326 1.592110 CGAACGTCAATATTGCGCTGG 60.592 52.381 23.18 13.92 33.29 4.85
325 327 1.396996 GAACGTCAATATTGCGCTGGT 59.603 47.619 23.18 8.59 33.29 4.00
326 328 0.726827 ACGTCAATATTGCGCTGGTG 59.273 50.000 23.18 0.00 33.29 4.17
327 329 1.006086 CGTCAATATTGCGCTGGTGA 58.994 50.000 9.73 2.18 0.00 4.02
328 330 1.396648 CGTCAATATTGCGCTGGTGAA 59.603 47.619 9.73 0.00 0.00 3.18
329 331 2.159585 CGTCAATATTGCGCTGGTGAAA 60.160 45.455 9.73 0.00 0.00 2.69
330 332 3.429085 GTCAATATTGCGCTGGTGAAAG 58.571 45.455 9.73 0.00 0.00 2.62
331 333 3.126858 GTCAATATTGCGCTGGTGAAAGA 59.873 43.478 9.73 0.00 0.00 2.52
332 334 3.374988 TCAATATTGCGCTGGTGAAAGAG 59.625 43.478 9.73 0.00 0.00 2.85
333 335 2.472695 TATTGCGCTGGTGAAAGAGT 57.527 45.000 9.73 0.00 0.00 3.24
334 336 2.472695 ATTGCGCTGGTGAAAGAGTA 57.527 45.000 9.73 0.00 0.00 2.59
335 337 1.795768 TTGCGCTGGTGAAAGAGTAG 58.204 50.000 9.73 0.00 0.00 2.57
336 338 0.670546 TGCGCTGGTGAAAGAGTAGC 60.671 55.000 9.73 0.00 0.00 3.58
337 339 0.390472 GCGCTGGTGAAAGAGTAGCT 60.390 55.000 0.00 0.00 32.43 3.32
338 340 1.634702 CGCTGGTGAAAGAGTAGCTC 58.365 55.000 0.00 0.00 32.43 4.09
339 341 1.067565 CGCTGGTGAAAGAGTAGCTCA 60.068 52.381 0.00 0.00 32.06 4.26
340 342 2.610479 CGCTGGTGAAAGAGTAGCTCAA 60.610 50.000 0.00 0.00 32.06 3.02
341 343 2.999355 GCTGGTGAAAGAGTAGCTCAAG 59.001 50.000 0.00 0.00 32.06 3.02
342 344 3.556004 GCTGGTGAAAGAGTAGCTCAAGT 60.556 47.826 0.00 0.00 32.06 3.16
343 345 4.636249 CTGGTGAAAGAGTAGCTCAAGTT 58.364 43.478 0.00 0.00 32.06 2.66
344 346 5.784177 CTGGTGAAAGAGTAGCTCAAGTTA 58.216 41.667 0.00 0.00 32.06 2.24
345 347 5.539048 TGGTGAAAGAGTAGCTCAAGTTAC 58.461 41.667 0.00 0.00 32.06 2.50
346 348 5.069914 TGGTGAAAGAGTAGCTCAAGTTACA 59.930 40.000 6.77 0.00 34.70 2.41
347 349 6.166982 GGTGAAAGAGTAGCTCAAGTTACAT 58.833 40.000 6.77 0.00 34.70 2.29
348 350 6.311690 GGTGAAAGAGTAGCTCAAGTTACATC 59.688 42.308 6.77 2.53 34.70 3.06
349 351 7.093992 GTGAAAGAGTAGCTCAAGTTACATCT 58.906 38.462 6.77 4.34 34.70 2.90
350 352 7.274686 GTGAAAGAGTAGCTCAAGTTACATCTC 59.725 40.741 6.77 0.00 34.70 2.75
351 353 5.493133 AGAGTAGCTCAAGTTACATCTCG 57.507 43.478 6.77 0.00 34.70 4.04
352 354 4.035278 AGTAGCTCAAGTTACATCTCGC 57.965 45.455 6.77 0.00 34.70 5.03
353 355 2.301577 AGCTCAAGTTACATCTCGCC 57.698 50.000 0.00 0.00 0.00 5.54
354 356 1.550524 AGCTCAAGTTACATCTCGCCA 59.449 47.619 0.00 0.00 0.00 5.69
355 357 2.169352 AGCTCAAGTTACATCTCGCCAT 59.831 45.455 0.00 0.00 0.00 4.40
356 358 2.541762 GCTCAAGTTACATCTCGCCATC 59.458 50.000 0.00 0.00 0.00 3.51
357 359 3.785486 CTCAAGTTACATCTCGCCATCA 58.215 45.455 0.00 0.00 0.00 3.07
358 360 3.521560 TCAAGTTACATCTCGCCATCAC 58.478 45.455 0.00 0.00 0.00 3.06
359 361 3.056179 TCAAGTTACATCTCGCCATCACA 60.056 43.478 0.00 0.00 0.00 3.58
360 362 3.610040 AGTTACATCTCGCCATCACAA 57.390 42.857 0.00 0.00 0.00 3.33
361 363 3.262420 AGTTACATCTCGCCATCACAAC 58.738 45.455 0.00 0.00 0.00 3.32
362 364 3.000041 GTTACATCTCGCCATCACAACA 59.000 45.455 0.00 0.00 0.00 3.33
363 365 1.442769 ACATCTCGCCATCACAACAC 58.557 50.000 0.00 0.00 0.00 3.32
364 366 1.270785 ACATCTCGCCATCACAACACA 60.271 47.619 0.00 0.00 0.00 3.72
365 367 2.011947 CATCTCGCCATCACAACACAT 58.988 47.619 0.00 0.00 0.00 3.21
366 368 1.441738 TCTCGCCATCACAACACATG 58.558 50.000 0.00 0.00 0.00 3.21
367 369 0.179181 CTCGCCATCACAACACATGC 60.179 55.000 0.00 0.00 0.00 4.06
368 370 0.888285 TCGCCATCACAACACATGCA 60.888 50.000 0.00 0.00 0.00 3.96
369 371 0.171679 CGCCATCACAACACATGCAT 59.828 50.000 0.00 0.00 0.00 3.96
370 372 1.635844 GCCATCACAACACATGCATG 58.364 50.000 25.09 25.09 0.00 4.06
371 373 1.202817 GCCATCACAACACATGCATGA 59.797 47.619 32.75 10.20 0.00 3.07
372 374 2.871133 CCATCACAACACATGCATGAC 58.129 47.619 32.75 0.00 0.00 3.06
373 375 2.229302 CCATCACAACACATGCATGACA 59.771 45.455 32.75 8.31 0.00 3.58
374 376 3.498082 CATCACAACACATGCATGACAG 58.502 45.455 32.75 21.97 0.00 3.51
375 377 1.881324 TCACAACACATGCATGACAGG 59.119 47.619 32.75 19.73 35.74 4.00
376 378 1.068125 CACAACACATGCATGACAGGG 60.068 52.381 32.75 18.43 33.23 4.45
377 379 1.202915 ACAACACATGCATGACAGGGA 60.203 47.619 32.75 0.00 33.23 4.20
378 380 1.200716 CAACACATGCATGACAGGGAC 59.799 52.381 32.75 0.00 33.23 4.46
379 381 0.322816 ACACATGCATGACAGGGACC 60.323 55.000 32.75 0.00 33.23 4.46
380 382 0.322726 CACATGCATGACAGGGACCA 60.323 55.000 32.75 0.00 33.23 4.02
381 383 0.405198 ACATGCATGACAGGGACCAA 59.595 50.000 32.75 0.00 33.23 3.67
382 384 1.100510 CATGCATGACAGGGACCAAG 58.899 55.000 22.59 0.00 0.00 3.61
383 385 0.994247 ATGCATGACAGGGACCAAGA 59.006 50.000 0.00 0.00 0.00 3.02
384 386 0.036732 TGCATGACAGGGACCAAGAC 59.963 55.000 0.00 0.00 0.00 3.01
385 387 1.021390 GCATGACAGGGACCAAGACG 61.021 60.000 0.00 0.00 0.00 4.18
386 388 0.321671 CATGACAGGGACCAAGACGT 59.678 55.000 0.00 0.00 0.00 4.34
387 389 0.321671 ATGACAGGGACCAAGACGTG 59.678 55.000 0.00 0.00 0.00 4.49
388 390 1.046472 TGACAGGGACCAAGACGTGT 61.046 55.000 0.00 0.00 38.28 4.49
389 391 0.600255 GACAGGGACCAAGACGTGTG 60.600 60.000 0.00 0.00 36.03 3.82
390 392 1.335132 ACAGGGACCAAGACGTGTGT 61.335 55.000 0.00 0.00 34.77 3.72
391 393 0.880278 CAGGGACCAAGACGTGTGTG 60.880 60.000 0.00 0.00 0.00 3.82
392 394 2.251642 GGGACCAAGACGTGTGTGC 61.252 63.158 0.00 0.00 0.00 4.57
393 395 1.522806 GGACCAAGACGTGTGTGCA 60.523 57.895 0.00 0.00 0.00 4.57
394 396 1.092921 GGACCAAGACGTGTGTGCAA 61.093 55.000 0.00 0.00 0.00 4.08
395 397 0.730265 GACCAAGACGTGTGTGCAAA 59.270 50.000 0.00 0.00 0.00 3.68
396 398 1.131504 GACCAAGACGTGTGTGCAAAA 59.868 47.619 0.00 0.00 0.00 2.44
397 399 1.135517 ACCAAGACGTGTGTGCAAAAC 60.136 47.619 0.00 0.00 0.00 2.43
398 400 1.135546 CCAAGACGTGTGTGCAAAACA 60.136 47.619 0.00 0.00 36.04 2.83
399 401 2.176369 CAAGACGTGTGTGCAAAACAG 58.824 47.619 0.00 2.33 32.31 3.16
400 402 0.732571 AGACGTGTGTGCAAAACAGG 59.267 50.000 17.38 17.38 45.17 4.00
402 404 3.234368 CGTGTGTGCAAAACAGGTC 57.766 52.632 12.88 0.00 32.31 3.85
403 405 0.588730 CGTGTGTGCAAAACAGGTCG 60.589 55.000 12.88 6.61 32.31 4.79
404 406 0.730265 GTGTGTGCAAAACAGGTCGA 59.270 50.000 3.79 0.00 32.31 4.20
405 407 1.333619 GTGTGTGCAAAACAGGTCGAT 59.666 47.619 3.79 0.00 32.31 3.59
406 408 1.601903 TGTGTGCAAAACAGGTCGATC 59.398 47.619 0.00 0.00 40.26 3.69
407 409 0.865111 TGTGCAAAACAGGTCGATCG 59.135 50.000 9.36 9.36 33.78 3.69
408 410 0.165944 GTGCAAAACAGGTCGATCGG 59.834 55.000 16.41 0.89 0.00 4.18
409 411 0.250124 TGCAAAACAGGTCGATCGGT 60.250 50.000 16.41 1.62 0.00 4.69
410 412 1.001068 TGCAAAACAGGTCGATCGGTA 59.999 47.619 16.41 0.00 0.00 4.02
411 413 2.070783 GCAAAACAGGTCGATCGGTAA 58.929 47.619 16.41 0.00 0.00 2.85
412 414 2.159747 GCAAAACAGGTCGATCGGTAAC 60.160 50.000 16.41 6.05 0.00 2.50
413 415 3.323243 CAAAACAGGTCGATCGGTAACT 58.677 45.455 16.41 1.18 0.00 2.24
414 416 3.672767 AAACAGGTCGATCGGTAACTT 57.327 42.857 16.41 0.00 0.00 2.66
415 417 2.649331 ACAGGTCGATCGGTAACTTG 57.351 50.000 16.41 14.76 0.00 3.16
416 418 1.891150 ACAGGTCGATCGGTAACTTGT 59.109 47.619 16.41 15.41 0.00 3.16
417 419 2.094854 ACAGGTCGATCGGTAACTTGTC 60.095 50.000 16.41 0.00 28.29 3.18
418 420 1.475682 AGGTCGATCGGTAACTTGTCC 59.524 52.381 16.41 4.56 0.00 4.02
419 421 1.542544 GTCGATCGGTAACTTGTCCG 58.457 55.000 16.41 0.00 46.93 4.79
425 427 3.222053 GGTAACTTGTCCGACCCAC 57.778 57.895 0.00 0.00 0.00 4.61
426 428 0.393820 GGTAACTTGTCCGACCCACA 59.606 55.000 0.00 0.00 0.00 4.17
427 429 1.505425 GTAACTTGTCCGACCCACAC 58.495 55.000 0.00 0.00 0.00 3.82
428 430 1.121378 TAACTTGTCCGACCCACACA 58.879 50.000 0.00 0.00 0.00 3.72
429 431 0.463116 AACTTGTCCGACCCACACAC 60.463 55.000 0.00 0.00 0.00 3.82
430 432 1.145156 CTTGTCCGACCCACACACA 59.855 57.895 0.00 0.00 0.00 3.72
431 433 1.153329 TTGTCCGACCCACACACAC 60.153 57.895 0.00 0.00 0.00 3.82
432 434 1.618876 TTGTCCGACCCACACACACT 61.619 55.000 0.00 0.00 0.00 3.55
433 435 1.300697 GTCCGACCCACACACACTC 60.301 63.158 0.00 0.00 0.00 3.51
434 436 2.355837 CCGACCCACACACACTCG 60.356 66.667 0.00 0.00 0.00 4.18
435 437 3.036084 CGACCCACACACACTCGC 61.036 66.667 0.00 0.00 0.00 5.03
436 438 2.108157 GACCCACACACACTCGCA 59.892 61.111 0.00 0.00 0.00 5.10
437 439 1.956170 GACCCACACACACTCGCAG 60.956 63.158 0.00 0.00 0.00 5.18
438 440 2.666190 CCCACACACACTCGCAGG 60.666 66.667 0.00 0.00 0.00 4.85
439 441 2.108976 CCACACACACTCGCAGGT 59.891 61.111 0.00 0.00 0.00 4.00
440 442 1.956170 CCACACACACTCGCAGGTC 60.956 63.158 0.00 0.00 0.00 3.85
441 443 1.227234 CACACACACTCGCAGGTCA 60.227 57.895 0.00 0.00 0.00 4.02
442 444 1.227263 ACACACACTCGCAGGTCAC 60.227 57.895 0.00 0.00 0.00 3.67
443 445 1.227234 CACACACTCGCAGGTCACA 60.227 57.895 0.00 0.00 0.00 3.58
444 446 0.809636 CACACACTCGCAGGTCACAA 60.810 55.000 0.00 0.00 0.00 3.33
445 447 0.810031 ACACACTCGCAGGTCACAAC 60.810 55.000 0.00 0.00 0.00 3.32
446 448 0.530650 CACACTCGCAGGTCACAACT 60.531 55.000 0.00 0.00 0.00 3.16
447 449 0.530650 ACACTCGCAGGTCACAACTG 60.531 55.000 0.00 0.00 38.95 3.16
448 450 0.249447 CACTCGCAGGTCACAACTGA 60.249 55.000 0.00 0.00 38.20 3.41
449 451 0.681733 ACTCGCAGGTCACAACTGAT 59.318 50.000 0.00 0.00 38.20 2.90
450 452 1.337260 ACTCGCAGGTCACAACTGATC 60.337 52.381 0.00 0.00 38.20 2.92
451 453 0.678950 TCGCAGGTCACAACTGATCA 59.321 50.000 0.00 0.00 38.20 2.92
452 454 0.792640 CGCAGGTCACAACTGATCAC 59.207 55.000 0.00 0.00 38.20 3.06
453 455 1.873486 CGCAGGTCACAACTGATCACA 60.873 52.381 0.00 0.00 38.20 3.58
454 456 2.221169 GCAGGTCACAACTGATCACAA 58.779 47.619 0.00 0.00 38.20 3.33
455 457 2.225019 GCAGGTCACAACTGATCACAAG 59.775 50.000 0.00 0.00 38.20 3.16
456 458 3.470709 CAGGTCACAACTGATCACAAGT 58.529 45.455 0.00 0.00 38.20 3.16
457 459 3.496130 CAGGTCACAACTGATCACAAGTC 59.504 47.826 0.00 0.00 38.20 3.01
458 460 2.476619 GGTCACAACTGATCACAAGTCG 59.523 50.000 0.00 0.00 0.00 4.18
459 461 2.096713 GTCACAACTGATCACAAGTCGC 60.097 50.000 0.00 0.00 0.00 5.19
460 462 1.195448 CACAACTGATCACAAGTCGCC 59.805 52.381 0.00 0.00 0.00 5.54
461 463 0.439985 CAACTGATCACAAGTCGCCG 59.560 55.000 0.00 0.00 0.00 6.46
462 464 0.317160 AACTGATCACAAGTCGCCGA 59.683 50.000 0.00 0.00 0.00 5.54
463 465 0.532573 ACTGATCACAAGTCGCCGAT 59.467 50.000 0.00 0.00 0.00 4.18
464 466 0.926155 CTGATCACAAGTCGCCGATG 59.074 55.000 0.00 0.00 0.00 3.84
465 467 0.460109 TGATCACAAGTCGCCGATGG 60.460 55.000 0.00 0.00 0.00 3.51
466 468 0.179111 GATCACAAGTCGCCGATGGA 60.179 55.000 0.00 0.00 0.00 3.41
467 469 0.179100 ATCACAAGTCGCCGATGGAG 60.179 55.000 0.00 0.00 0.00 3.86
468 470 1.079819 CACAAGTCGCCGATGGAGT 60.080 57.895 0.00 0.00 0.00 3.85
469 471 1.078759 CACAAGTCGCCGATGGAGTC 61.079 60.000 0.00 0.00 0.00 3.36
477 479 3.786101 CGATGGAGTCGCTGTTGG 58.214 61.111 0.00 0.00 44.33 3.77
478 480 1.215382 CGATGGAGTCGCTGTTGGA 59.785 57.895 0.00 0.00 44.33 3.53
479 481 0.803768 CGATGGAGTCGCTGTTGGAG 60.804 60.000 0.00 0.00 44.33 3.86
480 482 0.532573 GATGGAGTCGCTGTTGGAGA 59.467 55.000 0.00 0.00 0.00 3.71
481 483 0.534412 ATGGAGTCGCTGTTGGAGAG 59.466 55.000 0.00 0.00 0.00 3.20
482 484 0.827925 TGGAGTCGCTGTTGGAGAGT 60.828 55.000 0.00 0.00 0.00 3.24
483 485 0.389166 GGAGTCGCTGTTGGAGAGTG 60.389 60.000 0.00 0.00 0.00 3.51
484 486 0.598562 GAGTCGCTGTTGGAGAGTGA 59.401 55.000 0.00 0.00 0.00 3.41
485 487 1.000163 GAGTCGCTGTTGGAGAGTGAA 60.000 52.381 0.00 0.00 31.90 3.18
486 488 1.000283 AGTCGCTGTTGGAGAGTGAAG 60.000 52.381 0.00 0.00 31.90 3.02
487 489 1.040646 TCGCTGTTGGAGAGTGAAGT 58.959 50.000 0.00 0.00 0.00 3.01
488 490 2.030185 GTCGCTGTTGGAGAGTGAAGTA 60.030 50.000 0.00 0.00 31.90 2.24
489 491 2.229062 TCGCTGTTGGAGAGTGAAGTAG 59.771 50.000 0.00 0.00 0.00 2.57
490 492 2.229062 CGCTGTTGGAGAGTGAAGTAGA 59.771 50.000 0.00 0.00 0.00 2.59
491 493 3.671971 CGCTGTTGGAGAGTGAAGTAGAG 60.672 52.174 0.00 0.00 0.00 2.43
492 494 3.508012 GCTGTTGGAGAGTGAAGTAGAGA 59.492 47.826 0.00 0.00 0.00 3.10
493 495 4.617298 GCTGTTGGAGAGTGAAGTAGAGAC 60.617 50.000 0.00 0.00 0.00 3.36
494 496 3.502595 TGTTGGAGAGTGAAGTAGAGACG 59.497 47.826 0.00 0.00 0.00 4.18
495 497 2.712709 TGGAGAGTGAAGTAGAGACGG 58.287 52.381 0.00 0.00 0.00 4.79
496 498 1.402613 GGAGAGTGAAGTAGAGACGGC 59.597 57.143 0.00 0.00 0.00 5.68
497 499 1.402613 GAGAGTGAAGTAGAGACGGCC 59.597 57.143 0.00 0.00 0.00 6.13
498 500 0.099082 GAGTGAAGTAGAGACGGCCG 59.901 60.000 26.86 26.86 0.00 6.13
499 501 1.516603 GTGAAGTAGAGACGGCCGC 60.517 63.158 28.58 18.62 0.00 6.53
500 502 1.677966 TGAAGTAGAGACGGCCGCT 60.678 57.895 28.58 23.48 0.00 5.52
501 503 1.226717 GAAGTAGAGACGGCCGCTG 60.227 63.158 28.58 0.00 0.00 5.18
502 504 3.358076 AAGTAGAGACGGCCGCTGC 62.358 63.158 28.58 18.05 0.00 5.25
503 505 3.827898 GTAGAGACGGCCGCTGCT 61.828 66.667 28.58 20.64 37.74 4.24
504 506 2.124445 TAGAGACGGCCGCTGCTA 60.124 61.111 28.58 20.35 37.74 3.49
505 507 1.751544 TAGAGACGGCCGCTGCTAA 60.752 57.895 28.58 9.21 37.74 3.09
506 508 1.725557 TAGAGACGGCCGCTGCTAAG 61.726 60.000 28.58 0.00 37.74 2.18
507 509 4.821589 AGACGGCCGCTGCTAAGC 62.822 66.667 28.58 4.37 46.66 3.09
526 528 2.656947 CTACCTCAGCTAGAGCCTCT 57.343 55.000 0.00 0.00 43.31 3.69
527 529 3.780804 CTACCTCAGCTAGAGCCTCTA 57.219 52.381 0.70 0.70 43.31 2.43
538 540 3.963476 AGAGCCTCTAGACCATACACT 57.037 47.619 0.00 0.00 0.00 3.55
539 541 3.827722 AGAGCCTCTAGACCATACACTC 58.172 50.000 0.00 0.00 0.00 3.51
540 542 2.550606 GAGCCTCTAGACCATACACTCG 59.449 54.545 0.00 0.00 0.00 4.18
541 543 2.172930 AGCCTCTAGACCATACACTCGA 59.827 50.000 0.00 0.00 0.00 4.04
542 544 2.550606 GCCTCTAGACCATACACTCGAG 59.449 54.545 11.84 11.84 0.00 4.04
543 545 2.550606 CCTCTAGACCATACACTCGAGC 59.449 54.545 13.61 0.00 0.00 5.03
544 546 3.206964 CTCTAGACCATACACTCGAGCA 58.793 50.000 13.61 0.00 0.00 4.26
545 547 3.818210 CTCTAGACCATACACTCGAGCAT 59.182 47.826 13.61 2.93 0.00 3.79
546 548 2.879002 AGACCATACACTCGAGCATG 57.121 50.000 13.61 13.14 0.00 4.06
547 549 1.410517 AGACCATACACTCGAGCATGG 59.589 52.381 27.34 27.34 43.02 3.66
548 550 0.179073 ACCATACACTCGAGCATGGC 60.179 55.000 28.24 0.00 41.41 4.40
549 551 1.217585 CCATACACTCGAGCATGGCG 61.218 60.000 21.56 5.21 32.12 5.69
550 552 0.249031 CATACACTCGAGCATGGCGA 60.249 55.000 13.61 0.00 36.23 5.54
551 553 0.249073 ATACACTCGAGCATGGCGAC 60.249 55.000 13.61 0.00 33.71 5.19
552 554 2.279502 TACACTCGAGCATGGCGACC 62.280 60.000 13.61 0.00 33.71 4.79
553 555 4.498520 ACTCGAGCATGGCGACCG 62.499 66.667 13.61 0.00 33.71 4.79
564 566 4.803426 GCGACCGGCAGGACAGAG 62.803 72.222 10.86 0.00 42.87 3.35
565 567 3.374402 CGACCGGCAGGACAGAGT 61.374 66.667 10.86 0.00 41.02 3.24
566 568 2.574399 GACCGGCAGGACAGAGTC 59.426 66.667 10.86 0.00 41.02 3.36
567 569 3.343788 GACCGGCAGGACAGAGTCG 62.344 68.421 10.86 0.00 41.02 4.18
568 570 4.803426 CCGGCAGGACAGAGTCGC 62.803 72.222 0.00 0.00 41.02 5.19
570 572 4.803426 GGCAGGACAGAGTCGCGG 62.803 72.222 6.13 0.00 32.65 6.46
571 573 4.057428 GCAGGACAGAGTCGCGGT 62.057 66.667 6.13 0.00 32.65 5.68
572 574 2.126307 CAGGACAGAGTCGCGGTG 60.126 66.667 6.13 1.34 32.65 4.94
573 575 4.057428 AGGACAGAGTCGCGGTGC 62.057 66.667 6.13 0.12 32.65 5.01
587 589 2.255252 GTGCGTGCACCACCAATC 59.745 61.111 21.14 3.20 40.79 2.67
588 590 2.983030 TGCGTGCACCACCAATCC 60.983 61.111 12.15 0.00 0.00 3.01
589 591 4.101790 GCGTGCACCACCAATCCG 62.102 66.667 12.15 0.00 0.00 4.18
590 592 3.430862 CGTGCACCACCAATCCGG 61.431 66.667 12.15 0.00 42.50 5.14
591 593 2.033448 GTGCACCACCAATCCGGA 59.967 61.111 6.61 6.61 38.63 5.14
592 594 2.033448 TGCACCACCAATCCGGAC 59.967 61.111 6.12 0.00 38.63 4.79
593 595 2.750237 GCACCACCAATCCGGACC 60.750 66.667 6.12 0.00 38.63 4.46
594 596 2.435938 CACCACCAATCCGGACCG 60.436 66.667 6.12 6.99 38.63 4.79
623 625 4.974103 AAAAGATCTCGATATTTCGCGG 57.026 40.909 6.13 0.00 45.10 6.46
624 626 3.917329 AAGATCTCGATATTTCGCGGA 57.083 42.857 6.13 0.00 45.10 5.54
625 627 3.204597 AGATCTCGATATTTCGCGGAC 57.795 47.619 6.13 0.00 45.10 4.79
626 628 2.814919 AGATCTCGATATTTCGCGGACT 59.185 45.455 6.13 0.00 45.10 3.85
627 629 2.682952 TCTCGATATTTCGCGGACTC 57.317 50.000 6.13 0.00 45.10 3.36
628 630 1.070108 TCTCGATATTTCGCGGACTCG 60.070 52.381 6.13 6.57 45.10 4.18
629 631 0.040692 TCGATATTTCGCGGACTCGG 60.041 55.000 6.13 0.00 45.10 4.63
630 632 1.606350 CGATATTTCGCGGACTCGGC 61.606 60.000 6.13 0.00 38.75 5.54
641 643 4.541648 ACTCGGCGCCCCCTCTAT 62.542 66.667 23.46 0.00 0.00 1.98
642 644 3.996124 CTCGGCGCCCCCTCTATG 61.996 72.222 23.46 3.72 0.00 2.23
643 645 4.533124 TCGGCGCCCCCTCTATGA 62.533 66.667 23.46 6.57 0.00 2.15
644 646 3.546543 CGGCGCCCCCTCTATGAA 61.547 66.667 23.46 0.00 0.00 2.57
645 647 2.111251 GGCGCCCCCTCTATGAAC 59.889 66.667 18.11 0.00 0.00 3.18
646 648 2.280186 GCGCCCCCTCTATGAACG 60.280 66.667 0.00 0.00 0.00 3.95
647 649 2.280186 CGCCCCCTCTATGAACGC 60.280 66.667 0.00 0.00 0.00 4.84
648 650 2.280186 GCCCCCTCTATGAACGCG 60.280 66.667 3.53 3.53 0.00 6.01
649 651 2.421739 CCCCCTCTATGAACGCGG 59.578 66.667 12.47 0.00 0.00 6.46
650 652 2.421739 CCCCTCTATGAACGCGGG 59.578 66.667 12.47 0.00 34.62 6.13
651 653 2.131709 CCCCTCTATGAACGCGGGA 61.132 63.158 12.47 0.00 37.05 5.14
652 654 1.682451 CCCCTCTATGAACGCGGGAA 61.682 60.000 12.47 0.00 37.05 3.97
653 655 0.529992 CCCTCTATGAACGCGGGAAC 60.530 60.000 12.47 0.00 37.05 3.62
654 656 0.174845 CCTCTATGAACGCGGGAACA 59.825 55.000 12.47 5.09 0.00 3.18
655 657 1.404986 CCTCTATGAACGCGGGAACAA 60.405 52.381 12.47 0.00 0.00 2.83
656 658 2.550978 CTCTATGAACGCGGGAACAAT 58.449 47.619 12.47 0.00 0.00 2.71
657 659 2.540101 CTCTATGAACGCGGGAACAATC 59.460 50.000 12.47 0.00 0.00 2.67
658 660 1.597663 CTATGAACGCGGGAACAATCC 59.402 52.381 12.47 0.00 45.77 3.01
666 668 3.131478 GGAACAATCCCGGGTGCG 61.131 66.667 22.86 12.34 40.10 5.34
667 669 3.131478 GAACAATCCCGGGTGCGG 61.131 66.667 22.86 11.43 0.00 5.69
705 707 2.813908 GCCGAAAGCCACGATCGT 60.814 61.111 16.60 16.60 34.90 3.73
706 708 2.799540 GCCGAAAGCCACGATCGTC 61.800 63.158 19.84 8.45 34.90 4.20
707 709 2.505498 CCGAAAGCCACGATCGTCG 61.505 63.158 19.84 17.15 46.93 5.12
716 718 2.400006 CGATCGTCGTGCTCGTCT 59.600 61.111 7.03 0.00 38.33 4.18
717 719 1.226046 CGATCGTCGTGCTCGTCTT 60.226 57.895 7.03 0.00 38.33 3.01
718 720 1.188769 CGATCGTCGTGCTCGTCTTC 61.189 60.000 7.03 2.36 38.33 2.87
719 721 1.188769 GATCGTCGTGCTCGTCTTCG 61.189 60.000 8.17 9.15 38.33 3.79
720 722 3.524759 CGTCGTGCTCGTCTTCGC 61.525 66.667 8.17 0.00 38.33 4.70
721 723 3.524759 GTCGTGCTCGTCTTCGCG 61.525 66.667 8.17 0.00 38.33 5.87
722 724 4.021631 TCGTGCTCGTCTTCGCGT 62.022 61.111 5.77 0.00 37.46 6.01
723 725 3.524759 CGTGCTCGTCTTCGCGTC 61.525 66.667 5.77 0.00 36.96 5.19
724 726 3.173240 GTGCTCGTCTTCGCGTCC 61.173 66.667 5.77 0.00 36.96 4.79
725 727 3.666253 TGCTCGTCTTCGCGTCCA 61.666 61.111 5.77 0.00 36.96 4.02
726 728 3.173240 GCTCGTCTTCGCGTCCAC 61.173 66.667 5.77 0.00 36.96 4.02
727 729 2.870161 CTCGTCTTCGCGTCCACG 60.870 66.667 16.56 16.56 43.27 4.94
866 868 4.577988 TTTTGATCCCGGTTTATCCAGA 57.422 40.909 0.00 0.00 35.57 3.86
1153 1178 5.319453 TGTTCCTCTTCTCATCTTTGCATT 58.681 37.500 0.00 0.00 0.00 3.56
3680 5555 6.169094 CACAAGATGACACTTAGAGTCCAAT 58.831 40.000 7.30 0.00 35.15 3.16
4010 5885 6.416631 AGAAGATATATGAGCACTGCTTGA 57.583 37.500 4.67 0.00 39.88 3.02
4161 6036 6.409524 AGGAAAGAAAATGTCAAAGCATGA 57.590 33.333 0.00 0.00 35.05 3.07
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 8.870160 TTTAAGAGGAACATTGTTCAAACATG 57.130 30.769 26.27 0.00 38.95 3.21
60 62 6.716934 AGTCGGAATATAGTGTTCAGACAT 57.283 37.500 16.94 4.82 46.36 3.06
64 66 9.367444 AGTTTAAAGTCGGAATATAGTGTTCAG 57.633 33.333 0.00 0.00 0.00 3.02
113 115 8.730680 AGGCATACAGTTTAAACACAGAAATAG 58.269 33.333 20.06 2.73 0.00 1.73
167 169 4.262420 CGGTCAACATTTCCCCTCATTTTT 60.262 41.667 0.00 0.00 0.00 1.94
168 170 3.258123 CGGTCAACATTTCCCCTCATTTT 59.742 43.478 0.00 0.00 0.00 1.82
169 171 2.825532 CGGTCAACATTTCCCCTCATTT 59.174 45.455 0.00 0.00 0.00 2.32
170 172 2.446435 CGGTCAACATTTCCCCTCATT 58.554 47.619 0.00 0.00 0.00 2.57
171 173 1.340991 CCGGTCAACATTTCCCCTCAT 60.341 52.381 0.00 0.00 0.00 2.90
172 174 0.037590 CCGGTCAACATTTCCCCTCA 59.962 55.000 0.00 0.00 0.00 3.86
173 175 1.313091 GCCGGTCAACATTTCCCCTC 61.313 60.000 1.90 0.00 0.00 4.30
174 176 1.304134 GCCGGTCAACATTTCCCCT 60.304 57.895 1.90 0.00 0.00 4.79
175 177 0.034863 TAGCCGGTCAACATTTCCCC 60.035 55.000 1.90 0.00 0.00 4.81
176 178 1.828979 TTAGCCGGTCAACATTTCCC 58.171 50.000 1.90 0.00 0.00 3.97
177 179 3.192633 ACATTTAGCCGGTCAACATTTCC 59.807 43.478 1.90 0.00 0.00 3.13
178 180 4.165779 CACATTTAGCCGGTCAACATTTC 58.834 43.478 1.90 0.00 0.00 2.17
179 181 3.056891 CCACATTTAGCCGGTCAACATTT 60.057 43.478 1.90 0.00 0.00 2.32
180 182 2.491693 CCACATTTAGCCGGTCAACATT 59.508 45.455 1.90 0.00 0.00 2.71
181 183 2.091541 CCACATTTAGCCGGTCAACAT 58.908 47.619 1.90 0.00 0.00 2.71
182 184 1.529226 CCACATTTAGCCGGTCAACA 58.471 50.000 1.90 0.00 0.00 3.33
183 185 0.808755 CCCACATTTAGCCGGTCAAC 59.191 55.000 1.90 0.00 0.00 3.18
184 186 0.693622 TCCCACATTTAGCCGGTCAA 59.306 50.000 1.90 0.00 0.00 3.18
185 187 0.251916 CTCCCACATTTAGCCGGTCA 59.748 55.000 1.90 0.00 0.00 4.02
186 188 0.463833 CCTCCCACATTTAGCCGGTC 60.464 60.000 1.90 0.00 0.00 4.79
187 189 0.912487 TCCTCCCACATTTAGCCGGT 60.912 55.000 1.90 0.00 0.00 5.28
188 190 0.463833 GTCCTCCCACATTTAGCCGG 60.464 60.000 0.00 0.00 0.00 6.13
189 191 0.541863 AGTCCTCCCACATTTAGCCG 59.458 55.000 0.00 0.00 0.00 5.52
190 192 3.809905 CTTAGTCCTCCCACATTTAGCC 58.190 50.000 0.00 0.00 0.00 3.93
191 193 3.206964 GCTTAGTCCTCCCACATTTAGC 58.793 50.000 0.00 0.00 0.00 3.09
192 194 3.458189 CGCTTAGTCCTCCCACATTTAG 58.542 50.000 0.00 0.00 0.00 1.85
193 195 2.169769 CCGCTTAGTCCTCCCACATTTA 59.830 50.000 0.00 0.00 0.00 1.40
194 196 1.065418 CCGCTTAGTCCTCCCACATTT 60.065 52.381 0.00 0.00 0.00 2.32
195 197 0.541863 CCGCTTAGTCCTCCCACATT 59.458 55.000 0.00 0.00 0.00 2.71
196 198 0.617820 ACCGCTTAGTCCTCCCACAT 60.618 55.000 0.00 0.00 0.00 3.21
197 199 1.229082 ACCGCTTAGTCCTCCCACA 60.229 57.895 0.00 0.00 0.00 4.17
198 200 1.255667 TGACCGCTTAGTCCTCCCAC 61.256 60.000 0.00 0.00 35.83 4.61
199 201 1.077805 TGACCGCTTAGTCCTCCCA 59.922 57.895 0.00 0.00 35.83 4.37
200 202 1.516423 GTGACCGCTTAGTCCTCCC 59.484 63.158 0.00 0.00 35.83 4.30
201 203 0.971447 AGGTGACCGCTTAGTCCTCC 60.971 60.000 0.00 0.00 35.83 4.30
202 204 1.677052 CTAGGTGACCGCTTAGTCCTC 59.323 57.143 0.00 0.00 35.83 3.71
203 205 1.685491 CCTAGGTGACCGCTTAGTCCT 60.685 57.143 0.00 0.00 35.83 3.85
204 206 0.745468 CCTAGGTGACCGCTTAGTCC 59.255 60.000 0.00 0.00 35.83 3.85
205 207 1.677052 CTCCTAGGTGACCGCTTAGTC 59.323 57.143 9.08 0.00 37.28 2.59
206 208 1.005687 ACTCCTAGGTGACCGCTTAGT 59.994 52.381 17.66 3.04 0.00 2.24
207 209 1.765230 ACTCCTAGGTGACCGCTTAG 58.235 55.000 17.66 2.38 0.00 2.18
208 210 2.226962 AACTCCTAGGTGACCGCTTA 57.773 50.000 17.66 0.00 0.00 3.09
209 211 1.002087 CAAACTCCTAGGTGACCGCTT 59.998 52.381 17.66 0.00 0.00 4.68
210 212 0.608640 CAAACTCCTAGGTGACCGCT 59.391 55.000 17.66 0.00 0.00 5.52
211 213 1.019805 GCAAACTCCTAGGTGACCGC 61.020 60.000 17.66 11.54 0.00 5.68
212 214 0.320374 TGCAAACTCCTAGGTGACCG 59.680 55.000 17.66 5.93 0.00 4.79
213 215 1.071699 TGTGCAAACTCCTAGGTGACC 59.928 52.381 17.66 0.00 0.00 4.02
214 216 2.543777 TGTGCAAACTCCTAGGTGAC 57.456 50.000 17.66 5.38 0.00 3.67
215 217 3.788227 ATTGTGCAAACTCCTAGGTGA 57.212 42.857 17.66 0.00 0.00 4.02
216 218 3.057315 CCAATTGTGCAAACTCCTAGGTG 60.057 47.826 9.08 9.22 0.00 4.00
217 219 3.157087 CCAATTGTGCAAACTCCTAGGT 58.843 45.455 9.08 0.00 0.00 3.08
218 220 2.094545 GCCAATTGTGCAAACTCCTAGG 60.095 50.000 0.82 0.82 0.00 3.02
219 221 2.414559 CGCCAATTGTGCAAACTCCTAG 60.415 50.000 16.01 0.00 0.00 3.02
220 222 1.539388 CGCCAATTGTGCAAACTCCTA 59.461 47.619 16.01 0.00 0.00 2.94
221 223 0.314935 CGCCAATTGTGCAAACTCCT 59.685 50.000 16.01 0.00 0.00 3.69
222 224 0.031994 ACGCCAATTGTGCAAACTCC 59.968 50.000 16.01 0.00 0.00 3.85
223 225 1.268999 TGACGCCAATTGTGCAAACTC 60.269 47.619 16.01 7.41 0.00 3.01
224 226 0.743688 TGACGCCAATTGTGCAAACT 59.256 45.000 16.01 0.00 0.00 2.66
225 227 0.852136 GTGACGCCAATTGTGCAAAC 59.148 50.000 16.01 8.75 0.00 2.93
226 228 0.457443 TGTGACGCCAATTGTGCAAA 59.543 45.000 16.01 0.00 0.00 3.68
227 229 0.248825 GTGTGACGCCAATTGTGCAA 60.249 50.000 16.01 2.31 0.00 4.08
228 230 1.358402 GTGTGACGCCAATTGTGCA 59.642 52.632 16.01 0.00 0.00 4.57
229 231 0.934436 GTGTGTGACGCCAATTGTGC 60.934 55.000 4.43 6.76 0.00 4.57
230 232 0.657077 CGTGTGTGACGCCAATTGTG 60.657 55.000 4.43 0.00 42.21 3.33
231 233 1.646540 CGTGTGTGACGCCAATTGT 59.353 52.632 4.43 0.00 42.21 2.71
232 234 4.513275 CGTGTGTGACGCCAATTG 57.487 55.556 0.00 0.00 42.21 2.32
240 242 7.253519 GGTTTTAAAAGATGAAACGTGTGTGAC 60.254 37.037 0.00 0.00 34.85 3.67
241 243 6.748198 GGTTTTAAAAGATGAAACGTGTGTGA 59.252 34.615 0.00 0.00 34.85 3.58
242 244 6.528423 TGGTTTTAAAAGATGAAACGTGTGTG 59.472 34.615 0.00 0.00 34.85 3.82
243 245 6.622549 TGGTTTTAAAAGATGAAACGTGTGT 58.377 32.000 0.00 0.00 34.85 3.72
244 246 7.647715 AGATGGTTTTAAAAGATGAAACGTGTG 59.352 33.333 0.00 0.00 34.85 3.82
245 247 7.712797 AGATGGTTTTAAAAGATGAAACGTGT 58.287 30.769 0.00 0.00 34.85 4.49
246 248 7.860373 TGAGATGGTTTTAAAAGATGAAACGTG 59.140 33.333 0.00 0.00 34.85 4.49
247 249 7.936584 TGAGATGGTTTTAAAAGATGAAACGT 58.063 30.769 0.00 0.00 34.85 3.99
248 250 8.853345 CATGAGATGGTTTTAAAAGATGAAACG 58.147 33.333 0.00 0.00 34.85 3.60
249 251 8.650714 GCATGAGATGGTTTTAAAAGATGAAAC 58.349 33.333 0.00 0.00 33.63 2.78
250 252 8.587608 AGCATGAGATGGTTTTAAAAGATGAAA 58.412 29.630 0.00 0.00 37.84 2.69
251 253 8.125978 AGCATGAGATGGTTTTAAAAGATGAA 57.874 30.769 0.00 0.00 37.84 2.57
252 254 7.148018 GGAGCATGAGATGGTTTTAAAAGATGA 60.148 37.037 0.00 0.00 41.77 2.92
253 255 6.976925 GGAGCATGAGATGGTTTTAAAAGATG 59.023 38.462 0.00 0.00 41.77 2.90
254 256 6.664816 TGGAGCATGAGATGGTTTTAAAAGAT 59.335 34.615 0.00 0.00 41.77 2.40
255 257 6.009589 TGGAGCATGAGATGGTTTTAAAAGA 58.990 36.000 0.00 0.00 41.77 2.52
256 258 6.271488 TGGAGCATGAGATGGTTTTAAAAG 57.729 37.500 0.00 0.00 41.77 2.27
257 259 6.295236 CCTTGGAGCATGAGATGGTTTTAAAA 60.295 38.462 0.00 0.00 41.77 1.52
258 260 5.185635 CCTTGGAGCATGAGATGGTTTTAAA 59.814 40.000 0.00 0.00 41.77 1.52
259 261 4.706476 CCTTGGAGCATGAGATGGTTTTAA 59.294 41.667 0.00 0.00 41.77 1.52
260 262 4.018506 TCCTTGGAGCATGAGATGGTTTTA 60.019 41.667 0.00 0.00 41.77 1.52
261 263 3.094572 CCTTGGAGCATGAGATGGTTTT 58.905 45.455 0.00 0.00 41.77 2.43
262 264 2.309755 TCCTTGGAGCATGAGATGGTTT 59.690 45.455 0.00 0.00 41.77 3.27
263 265 1.918262 TCCTTGGAGCATGAGATGGTT 59.082 47.619 0.00 0.00 41.77 3.67
264 266 1.588239 TCCTTGGAGCATGAGATGGT 58.412 50.000 0.00 0.00 44.87 3.55
265 267 2.723322 TTCCTTGGAGCATGAGATGG 57.277 50.000 0.00 0.00 0.00 3.51
266 268 5.348986 CAATTTTCCTTGGAGCATGAGATG 58.651 41.667 0.00 0.00 0.00 2.90
267 269 4.142004 GCAATTTTCCTTGGAGCATGAGAT 60.142 41.667 0.00 0.00 0.00 2.75
268 270 3.194116 GCAATTTTCCTTGGAGCATGAGA 59.806 43.478 0.00 0.00 0.00 3.27
269 271 3.518590 GCAATTTTCCTTGGAGCATGAG 58.481 45.455 0.00 0.00 0.00 2.90
270 272 2.094597 CGCAATTTTCCTTGGAGCATGA 60.095 45.455 0.00 0.00 0.00 3.07
271 273 2.264813 CGCAATTTTCCTTGGAGCATG 58.735 47.619 0.00 0.00 0.00 4.06
272 274 1.404583 GCGCAATTTTCCTTGGAGCAT 60.405 47.619 0.30 0.00 0.00 3.79
273 275 0.038343 GCGCAATTTTCCTTGGAGCA 60.038 50.000 0.30 0.00 0.00 4.26
274 276 0.038343 TGCGCAATTTTCCTTGGAGC 60.038 50.000 8.16 0.00 0.00 4.70
275 277 1.270550 ACTGCGCAATTTTCCTTGGAG 59.729 47.619 13.05 0.00 0.00 3.86
276 278 1.327303 ACTGCGCAATTTTCCTTGGA 58.673 45.000 13.05 0.00 0.00 3.53
277 279 1.794116 CAACTGCGCAATTTTCCTTGG 59.206 47.619 13.05 0.00 0.00 3.61
278 280 2.727798 CTCAACTGCGCAATTTTCCTTG 59.272 45.455 13.05 0.00 0.00 3.61
279 281 2.362077 ACTCAACTGCGCAATTTTCCTT 59.638 40.909 13.05 0.00 0.00 3.36
280 282 1.956477 ACTCAACTGCGCAATTTTCCT 59.044 42.857 13.05 0.00 0.00 3.36
281 283 2.422276 ACTCAACTGCGCAATTTTCC 57.578 45.000 13.05 0.00 0.00 3.13
282 284 3.234386 GGTACTCAACTGCGCAATTTTC 58.766 45.455 13.05 0.00 0.00 2.29
283 285 2.030274 GGGTACTCAACTGCGCAATTTT 60.030 45.455 13.05 1.59 0.00 1.82
284 286 1.539827 GGGTACTCAACTGCGCAATTT 59.460 47.619 13.05 4.58 0.00 1.82
285 287 1.165270 GGGTACTCAACTGCGCAATT 58.835 50.000 13.05 4.27 0.00 2.32
286 288 1.019278 CGGGTACTCAACTGCGCAAT 61.019 55.000 13.05 0.00 0.00 3.56
287 289 1.666553 CGGGTACTCAACTGCGCAA 60.667 57.895 13.05 0.00 0.00 4.85
288 290 2.048597 CGGGTACTCAACTGCGCA 60.049 61.111 10.98 10.98 0.00 6.09
289 291 1.373748 TTCGGGTACTCAACTGCGC 60.374 57.895 0.00 0.00 0.00 6.09
290 292 1.342082 CGTTCGGGTACTCAACTGCG 61.342 60.000 0.00 0.00 0.00 5.18
291 293 0.319297 ACGTTCGGGTACTCAACTGC 60.319 55.000 0.00 0.00 0.00 4.40
292 294 1.001048 TGACGTTCGGGTACTCAACTG 60.001 52.381 0.00 0.00 0.00 3.16
293 295 1.321474 TGACGTTCGGGTACTCAACT 58.679 50.000 0.00 0.00 0.00 3.16
294 296 2.138596 TTGACGTTCGGGTACTCAAC 57.861 50.000 0.00 0.00 0.00 3.18
295 297 4.724074 ATATTGACGTTCGGGTACTCAA 57.276 40.909 0.00 0.00 0.00 3.02
296 298 4.426416 CAATATTGACGTTCGGGTACTCA 58.574 43.478 10.04 0.00 0.00 3.41
297 299 3.244579 GCAATATTGACGTTCGGGTACTC 59.755 47.826 19.73 0.00 0.00 2.59
298 300 3.192466 GCAATATTGACGTTCGGGTACT 58.808 45.455 19.73 0.00 0.00 2.73
299 301 2.034339 CGCAATATTGACGTTCGGGTAC 60.034 50.000 19.73 0.00 0.00 3.34
300 302 2.195096 CGCAATATTGACGTTCGGGTA 58.805 47.619 19.73 0.00 0.00 3.69
301 303 1.003851 CGCAATATTGACGTTCGGGT 58.996 50.000 19.73 0.00 0.00 5.28
302 304 0.315869 GCGCAATATTGACGTTCGGG 60.316 55.000 19.73 0.00 32.85 5.14
303 305 0.650512 AGCGCAATATTGACGTTCGG 59.349 50.000 19.73 0.25 32.85 4.30
304 306 1.592110 CCAGCGCAATATTGACGTTCG 60.592 52.381 19.73 12.94 32.85 3.95
305 307 1.396996 ACCAGCGCAATATTGACGTTC 59.603 47.619 19.73 9.81 32.85 3.95
306 308 1.130373 CACCAGCGCAATATTGACGTT 59.870 47.619 19.73 15.74 32.85 3.99
307 309 0.726827 CACCAGCGCAATATTGACGT 59.273 50.000 19.73 9.63 32.85 4.34
308 310 1.006086 TCACCAGCGCAATATTGACG 58.994 50.000 19.73 20.29 0.00 4.35
309 311 3.126858 TCTTTCACCAGCGCAATATTGAC 59.873 43.478 19.73 9.93 0.00 3.18
310 312 3.342719 TCTTTCACCAGCGCAATATTGA 58.657 40.909 19.73 1.18 0.00 2.57
311 313 3.127548 ACTCTTTCACCAGCGCAATATTG 59.872 43.478 11.47 11.27 0.00 1.90
312 314 3.347216 ACTCTTTCACCAGCGCAATATT 58.653 40.909 11.47 0.00 0.00 1.28
313 315 2.991250 ACTCTTTCACCAGCGCAATAT 58.009 42.857 11.47 0.00 0.00 1.28
314 316 2.472695 ACTCTTTCACCAGCGCAATA 57.527 45.000 11.47 0.00 0.00 1.90
315 317 2.350522 CTACTCTTTCACCAGCGCAAT 58.649 47.619 11.47 0.00 0.00 3.56
316 318 1.795768 CTACTCTTTCACCAGCGCAA 58.204 50.000 11.47 0.00 0.00 4.85
317 319 0.670546 GCTACTCTTTCACCAGCGCA 60.671 55.000 11.47 0.00 0.00 6.09
318 320 0.390472 AGCTACTCTTTCACCAGCGC 60.390 55.000 0.00 0.00 37.32 5.92
319 321 1.067565 TGAGCTACTCTTTCACCAGCG 60.068 52.381 0.00 0.00 37.32 5.18
320 322 2.751166 TGAGCTACTCTTTCACCAGC 57.249 50.000 0.00 0.00 0.00 4.85
321 323 4.264460 ACTTGAGCTACTCTTTCACCAG 57.736 45.455 0.00 0.00 0.00 4.00
322 324 4.689612 AACTTGAGCTACTCTTTCACCA 57.310 40.909 0.00 0.00 0.00 4.17
323 325 5.539048 TGTAACTTGAGCTACTCTTTCACC 58.461 41.667 0.00 0.00 0.00 4.02
324 326 7.093992 AGATGTAACTTGAGCTACTCTTTCAC 58.906 38.462 0.00 0.00 0.00 3.18
325 327 7.233389 AGATGTAACTTGAGCTACTCTTTCA 57.767 36.000 0.00 0.00 0.00 2.69
326 328 6.470877 CGAGATGTAACTTGAGCTACTCTTTC 59.529 42.308 0.00 0.00 0.00 2.62
327 329 6.326375 CGAGATGTAACTTGAGCTACTCTTT 58.674 40.000 0.00 0.00 0.00 2.52
328 330 5.677598 GCGAGATGTAACTTGAGCTACTCTT 60.678 44.000 0.00 0.00 0.00 2.85
329 331 4.201970 GCGAGATGTAACTTGAGCTACTCT 60.202 45.833 0.00 0.00 0.00 3.24
330 332 4.039032 GCGAGATGTAACTTGAGCTACTC 58.961 47.826 0.00 0.00 0.00 2.59
331 333 3.181485 GGCGAGATGTAACTTGAGCTACT 60.181 47.826 0.00 0.00 0.00 2.57
332 334 3.117046 GGCGAGATGTAACTTGAGCTAC 58.883 50.000 0.00 0.00 0.00 3.58
333 335 2.758423 TGGCGAGATGTAACTTGAGCTA 59.242 45.455 0.00 0.00 0.00 3.32
334 336 1.550524 TGGCGAGATGTAACTTGAGCT 59.449 47.619 0.00 0.00 0.00 4.09
335 337 2.010145 TGGCGAGATGTAACTTGAGC 57.990 50.000 0.00 0.00 0.00 4.26
336 338 3.553511 GTGATGGCGAGATGTAACTTGAG 59.446 47.826 0.00 0.00 0.00 3.02
337 339 3.056179 TGTGATGGCGAGATGTAACTTGA 60.056 43.478 0.00 0.00 0.00 3.02
338 340 3.261580 TGTGATGGCGAGATGTAACTTG 58.738 45.455 0.00 0.00 0.00 3.16
339 341 3.610040 TGTGATGGCGAGATGTAACTT 57.390 42.857 0.00 0.00 0.00 2.66
340 342 3.262420 GTTGTGATGGCGAGATGTAACT 58.738 45.455 0.00 0.00 0.00 2.24
341 343 3.000041 TGTTGTGATGGCGAGATGTAAC 59.000 45.455 0.00 0.00 0.00 2.50
342 344 3.000041 GTGTTGTGATGGCGAGATGTAA 59.000 45.455 0.00 0.00 0.00 2.41
343 345 2.028567 TGTGTTGTGATGGCGAGATGTA 60.029 45.455 0.00 0.00 0.00 2.29
344 346 1.270785 TGTGTTGTGATGGCGAGATGT 60.271 47.619 0.00 0.00 0.00 3.06
345 347 1.441738 TGTGTTGTGATGGCGAGATG 58.558 50.000 0.00 0.00 0.00 2.90
346 348 2.011947 CATGTGTTGTGATGGCGAGAT 58.988 47.619 0.00 0.00 0.00 2.75
347 349 1.441738 CATGTGTTGTGATGGCGAGA 58.558 50.000 0.00 0.00 0.00 4.04
348 350 0.179181 GCATGTGTTGTGATGGCGAG 60.179 55.000 0.00 0.00 0.00 5.03
349 351 0.888285 TGCATGTGTTGTGATGGCGA 60.888 50.000 0.00 0.00 0.00 5.54
350 352 0.171679 ATGCATGTGTTGTGATGGCG 59.828 50.000 0.00 0.00 0.00 5.69
351 353 1.202817 TCATGCATGTGTTGTGATGGC 59.797 47.619 25.43 0.00 0.00 4.40
352 354 2.229302 TGTCATGCATGTGTTGTGATGG 59.771 45.455 25.43 0.00 0.00 3.51
353 355 3.498082 CTGTCATGCATGTGTTGTGATG 58.502 45.455 25.43 0.00 0.00 3.07
354 356 2.490509 CCTGTCATGCATGTGTTGTGAT 59.509 45.455 25.43 0.00 0.00 3.06
355 357 1.881324 CCTGTCATGCATGTGTTGTGA 59.119 47.619 25.43 2.95 0.00 3.58
356 358 1.068125 CCCTGTCATGCATGTGTTGTG 60.068 52.381 25.43 10.76 0.00 3.33
357 359 1.202915 TCCCTGTCATGCATGTGTTGT 60.203 47.619 25.43 0.00 0.00 3.32
358 360 1.200716 GTCCCTGTCATGCATGTGTTG 59.799 52.381 25.43 13.89 0.00 3.33
359 361 1.538047 GTCCCTGTCATGCATGTGTT 58.462 50.000 25.43 0.00 0.00 3.32
360 362 0.322816 GGTCCCTGTCATGCATGTGT 60.323 55.000 25.43 0.00 0.00 3.72
361 363 0.322726 TGGTCCCTGTCATGCATGTG 60.323 55.000 25.43 16.12 0.00 3.21
362 364 0.405198 TTGGTCCCTGTCATGCATGT 59.595 50.000 25.43 0.00 0.00 3.21
363 365 1.100510 CTTGGTCCCTGTCATGCATG 58.899 55.000 21.07 21.07 0.00 4.06
364 366 0.994247 TCTTGGTCCCTGTCATGCAT 59.006 50.000 0.00 0.00 0.00 3.96
365 367 0.036732 GTCTTGGTCCCTGTCATGCA 59.963 55.000 0.00 0.00 0.00 3.96
366 368 1.021390 CGTCTTGGTCCCTGTCATGC 61.021 60.000 0.00 0.00 0.00 4.06
367 369 0.321671 ACGTCTTGGTCCCTGTCATG 59.678 55.000 0.00 0.00 0.00 3.07
368 370 0.321671 CACGTCTTGGTCCCTGTCAT 59.678 55.000 0.00 0.00 0.00 3.06
369 371 1.046472 ACACGTCTTGGTCCCTGTCA 61.046 55.000 0.00 0.00 0.00 3.58
370 372 0.600255 CACACGTCTTGGTCCCTGTC 60.600 60.000 0.00 0.00 0.00 3.51
371 373 1.335132 ACACACGTCTTGGTCCCTGT 61.335 55.000 0.00 0.00 0.00 4.00
372 374 0.880278 CACACACGTCTTGGTCCCTG 60.880 60.000 0.00 0.00 0.00 4.45
373 375 1.445942 CACACACGTCTTGGTCCCT 59.554 57.895 0.00 0.00 0.00 4.20
374 376 2.251642 GCACACACGTCTTGGTCCC 61.252 63.158 0.00 0.00 0.00 4.46
375 377 1.092921 TTGCACACACGTCTTGGTCC 61.093 55.000 0.00 0.00 0.00 4.46
376 378 0.730265 TTTGCACACACGTCTTGGTC 59.270 50.000 0.00 0.00 0.00 4.02
377 379 1.135517 GTTTTGCACACACGTCTTGGT 60.136 47.619 0.00 0.00 0.00 3.67
378 380 1.135546 TGTTTTGCACACACGTCTTGG 60.136 47.619 0.00 0.00 0.00 3.61
379 381 2.176369 CTGTTTTGCACACACGTCTTG 58.824 47.619 0.00 0.00 0.00 3.02
380 382 1.132262 CCTGTTTTGCACACACGTCTT 59.868 47.619 0.00 0.00 0.00 3.01
381 383 0.732571 CCTGTTTTGCACACACGTCT 59.267 50.000 0.00 0.00 0.00 4.18
382 384 0.450184 ACCTGTTTTGCACACACGTC 59.550 50.000 0.00 0.00 0.00 4.34
383 385 0.450184 GACCTGTTTTGCACACACGT 59.550 50.000 0.00 0.00 0.00 4.49
384 386 0.588730 CGACCTGTTTTGCACACACG 60.589 55.000 0.00 0.00 0.00 4.49
385 387 0.730265 TCGACCTGTTTTGCACACAC 59.270 50.000 0.00 0.00 0.00 3.82
386 388 1.601903 GATCGACCTGTTTTGCACACA 59.398 47.619 0.00 0.00 0.00 3.72
387 389 1.398451 CGATCGACCTGTTTTGCACAC 60.398 52.381 10.26 0.00 0.00 3.82
388 390 0.865111 CGATCGACCTGTTTTGCACA 59.135 50.000 10.26 0.00 0.00 4.57
389 391 0.165944 CCGATCGACCTGTTTTGCAC 59.834 55.000 18.66 0.00 0.00 4.57
390 392 0.250124 ACCGATCGACCTGTTTTGCA 60.250 50.000 18.66 0.00 0.00 4.08
391 393 1.717194 TACCGATCGACCTGTTTTGC 58.283 50.000 18.66 0.00 0.00 3.68
392 394 3.323243 AGTTACCGATCGACCTGTTTTG 58.677 45.455 18.66 0.00 0.00 2.44
393 395 3.672767 AGTTACCGATCGACCTGTTTT 57.327 42.857 18.66 0.00 0.00 2.43
394 396 3.243975 ACAAGTTACCGATCGACCTGTTT 60.244 43.478 18.66 0.82 0.00 2.83
395 397 2.298163 ACAAGTTACCGATCGACCTGTT 59.702 45.455 18.66 1.27 0.00 3.16
396 398 1.891150 ACAAGTTACCGATCGACCTGT 59.109 47.619 18.66 10.15 0.00 4.00
397 399 2.527100 GACAAGTTACCGATCGACCTG 58.473 52.381 18.66 9.48 0.00 4.00
398 400 1.475682 GGACAAGTTACCGATCGACCT 59.524 52.381 18.66 3.30 0.00 3.85
399 401 1.918595 GGACAAGTTACCGATCGACC 58.081 55.000 18.66 0.76 0.00 4.79
407 409 0.393820 TGTGGGTCGGACAAGTTACC 59.606 55.000 10.76 1.25 0.00 2.85
408 410 1.202557 TGTGTGGGTCGGACAAGTTAC 60.203 52.381 10.76 3.11 0.00 2.50
409 411 1.121378 TGTGTGGGTCGGACAAGTTA 58.879 50.000 10.76 0.00 0.00 2.24
410 412 0.463116 GTGTGTGGGTCGGACAAGTT 60.463 55.000 10.76 0.00 0.00 2.66
411 413 1.145377 GTGTGTGGGTCGGACAAGT 59.855 57.895 10.76 0.00 0.00 3.16
412 414 1.145156 TGTGTGTGGGTCGGACAAG 59.855 57.895 10.76 0.00 0.00 3.16
413 415 1.153329 GTGTGTGTGGGTCGGACAA 60.153 57.895 10.76 0.00 0.00 3.18
414 416 2.023414 GAGTGTGTGTGGGTCGGACA 62.023 60.000 10.76 0.00 0.00 4.02
415 417 1.300697 GAGTGTGTGTGGGTCGGAC 60.301 63.158 0.00 0.00 0.00 4.79
416 418 2.852180 CGAGTGTGTGTGGGTCGGA 61.852 63.158 0.00 0.00 0.00 4.55
417 419 2.355837 CGAGTGTGTGTGGGTCGG 60.356 66.667 0.00 0.00 0.00 4.79
418 420 3.036084 GCGAGTGTGTGTGGGTCG 61.036 66.667 0.00 0.00 0.00 4.79
419 421 1.956170 CTGCGAGTGTGTGTGGGTC 60.956 63.158 0.00 0.00 0.00 4.46
420 422 2.108976 CTGCGAGTGTGTGTGGGT 59.891 61.111 0.00 0.00 0.00 4.51
421 423 2.666190 CCTGCGAGTGTGTGTGGG 60.666 66.667 0.00 0.00 0.00 4.61
422 424 1.956170 GACCTGCGAGTGTGTGTGG 60.956 63.158 0.00 0.00 0.00 4.17
423 425 1.227234 TGACCTGCGAGTGTGTGTG 60.227 57.895 0.00 0.00 0.00 3.82
424 426 1.227263 GTGACCTGCGAGTGTGTGT 60.227 57.895 0.00 0.00 0.00 3.72
425 427 0.809636 TTGTGACCTGCGAGTGTGTG 60.810 55.000 0.00 0.00 0.00 3.82
426 428 0.810031 GTTGTGACCTGCGAGTGTGT 60.810 55.000 0.00 0.00 0.00 3.72
427 429 0.530650 AGTTGTGACCTGCGAGTGTG 60.531 55.000 0.00 0.00 0.00 3.82
428 430 0.530650 CAGTTGTGACCTGCGAGTGT 60.531 55.000 0.00 0.00 0.00 3.55
429 431 0.249447 TCAGTTGTGACCTGCGAGTG 60.249 55.000 0.00 0.00 0.00 3.51
430 432 0.681733 ATCAGTTGTGACCTGCGAGT 59.318 50.000 0.00 0.00 34.75 4.18
431 433 1.337167 TGATCAGTTGTGACCTGCGAG 60.337 52.381 0.00 0.00 34.75 5.03
432 434 0.678950 TGATCAGTTGTGACCTGCGA 59.321 50.000 0.00 0.00 34.75 5.10
433 435 0.792640 GTGATCAGTTGTGACCTGCG 59.207 55.000 0.00 0.00 34.75 5.18
434 436 1.882912 TGTGATCAGTTGTGACCTGC 58.117 50.000 0.00 0.00 34.75 4.85
435 437 3.470709 ACTTGTGATCAGTTGTGACCTG 58.529 45.455 0.00 0.00 34.75 4.00
436 438 3.733337 GACTTGTGATCAGTTGTGACCT 58.267 45.455 0.00 0.00 34.75 3.85
437 439 2.476619 CGACTTGTGATCAGTTGTGACC 59.523 50.000 0.00 0.00 34.75 4.02
438 440 2.096713 GCGACTTGTGATCAGTTGTGAC 60.097 50.000 0.00 0.00 34.75 3.67
439 441 2.135139 GCGACTTGTGATCAGTTGTGA 58.865 47.619 0.00 0.00 37.02 3.58
440 442 1.195448 GGCGACTTGTGATCAGTTGTG 59.805 52.381 0.00 0.00 0.00 3.33
441 443 1.512926 GGCGACTTGTGATCAGTTGT 58.487 50.000 0.00 0.00 0.00 3.32
442 444 0.439985 CGGCGACTTGTGATCAGTTG 59.560 55.000 0.00 0.00 0.00 3.16
443 445 0.317160 TCGGCGACTTGTGATCAGTT 59.683 50.000 4.99 0.00 0.00 3.16
444 446 0.532573 ATCGGCGACTTGTGATCAGT 59.467 50.000 13.76 0.00 0.00 3.41
445 447 0.926155 CATCGGCGACTTGTGATCAG 59.074 55.000 13.76 0.00 0.00 2.90
446 448 0.460109 CCATCGGCGACTTGTGATCA 60.460 55.000 13.76 0.00 0.00 2.92
447 449 0.179111 TCCATCGGCGACTTGTGATC 60.179 55.000 13.76 0.00 0.00 2.92
448 450 0.179100 CTCCATCGGCGACTTGTGAT 60.179 55.000 13.76 0.00 0.00 3.06
449 451 1.215382 CTCCATCGGCGACTTGTGA 59.785 57.895 13.76 6.62 0.00 3.58
450 452 1.078759 GACTCCATCGGCGACTTGTG 61.079 60.000 13.76 6.48 0.00 3.33
451 453 1.215647 GACTCCATCGGCGACTTGT 59.784 57.895 13.76 9.15 0.00 3.16
452 454 4.094684 GACTCCATCGGCGACTTG 57.905 61.111 13.76 7.79 0.00 3.16
461 463 0.532573 TCTCCAACAGCGACTCCATC 59.467 55.000 0.00 0.00 0.00 3.51
462 464 0.534412 CTCTCCAACAGCGACTCCAT 59.466 55.000 0.00 0.00 0.00 3.41
463 465 0.827925 ACTCTCCAACAGCGACTCCA 60.828 55.000 0.00 0.00 0.00 3.86
464 466 0.389166 CACTCTCCAACAGCGACTCC 60.389 60.000 0.00 0.00 0.00 3.85
465 467 0.598562 TCACTCTCCAACAGCGACTC 59.401 55.000 0.00 0.00 0.00 3.36
466 468 1.000283 CTTCACTCTCCAACAGCGACT 60.000 52.381 0.00 0.00 0.00 4.18
467 469 1.269831 ACTTCACTCTCCAACAGCGAC 60.270 52.381 0.00 0.00 0.00 5.19
468 470 1.040646 ACTTCACTCTCCAACAGCGA 58.959 50.000 0.00 0.00 0.00 4.93
469 471 2.229062 TCTACTTCACTCTCCAACAGCG 59.771 50.000 0.00 0.00 0.00 5.18
470 472 3.508012 TCTCTACTTCACTCTCCAACAGC 59.492 47.826 0.00 0.00 0.00 4.40
471 473 4.378978 CGTCTCTACTTCACTCTCCAACAG 60.379 50.000 0.00 0.00 0.00 3.16
472 474 3.502595 CGTCTCTACTTCACTCTCCAACA 59.497 47.826 0.00 0.00 0.00 3.33
473 475 3.119779 CCGTCTCTACTTCACTCTCCAAC 60.120 52.174 0.00 0.00 0.00 3.77
474 476 3.082548 CCGTCTCTACTTCACTCTCCAA 58.917 50.000 0.00 0.00 0.00 3.53
475 477 2.712709 CCGTCTCTACTTCACTCTCCA 58.287 52.381 0.00 0.00 0.00 3.86
476 478 1.402613 GCCGTCTCTACTTCACTCTCC 59.597 57.143 0.00 0.00 0.00 3.71
477 479 1.402613 GGCCGTCTCTACTTCACTCTC 59.597 57.143 0.00 0.00 0.00 3.20
478 480 1.465794 GGCCGTCTCTACTTCACTCT 58.534 55.000 0.00 0.00 0.00 3.24
479 481 0.099082 CGGCCGTCTCTACTTCACTC 59.901 60.000 19.50 0.00 0.00 3.51
480 482 1.935327 GCGGCCGTCTCTACTTCACT 61.935 60.000 28.70 0.00 0.00 3.41
481 483 1.516603 GCGGCCGTCTCTACTTCAC 60.517 63.158 28.70 0.32 0.00 3.18
482 484 1.677966 AGCGGCCGTCTCTACTTCA 60.678 57.895 28.70 0.00 0.00 3.02
483 485 1.226717 CAGCGGCCGTCTCTACTTC 60.227 63.158 28.70 6.22 0.00 3.01
484 486 2.885861 CAGCGGCCGTCTCTACTT 59.114 61.111 28.70 0.00 0.00 2.24
485 487 2.888464 TAGCAGCGGCCGTCTCTACT 62.888 60.000 28.70 17.29 42.56 2.57
486 488 2.001361 TTAGCAGCGGCCGTCTCTAC 62.001 60.000 28.70 10.29 42.56 2.59
487 489 1.725557 CTTAGCAGCGGCCGTCTCTA 61.726 60.000 28.70 20.53 42.56 2.43
488 490 3.068691 TTAGCAGCGGCCGTCTCT 61.069 61.111 28.70 21.55 42.56 3.10
489 491 2.583593 CTTAGCAGCGGCCGTCTC 60.584 66.667 28.70 15.43 42.56 3.36
490 492 4.821589 GCTTAGCAGCGGCCGTCT 62.822 66.667 28.70 21.17 42.56 4.18
507 509 2.656947 AGAGGCTCTAGCTGAGGTAG 57.343 55.000 17.09 12.26 42.87 3.18
508 510 3.071892 GTCTAGAGGCTCTAGCTGAGGTA 59.928 52.174 36.09 20.57 44.65 3.08
509 511 2.131854 TCTAGAGGCTCTAGCTGAGGT 58.868 52.381 36.09 9.22 44.65 3.85
510 512 2.504367 GTCTAGAGGCTCTAGCTGAGG 58.496 57.143 36.09 19.66 44.65 3.86
511 513 2.158682 TGGTCTAGAGGCTCTAGCTGAG 60.159 54.545 36.09 22.02 44.65 3.35
512 514 1.847088 TGGTCTAGAGGCTCTAGCTGA 59.153 52.381 36.09 22.59 44.65 4.26
513 515 2.356665 TGGTCTAGAGGCTCTAGCTG 57.643 55.000 36.09 20.91 44.65 4.24
514 516 3.396276 TGTATGGTCTAGAGGCTCTAGCT 59.604 47.826 36.09 24.63 44.65 3.32
515 517 3.504520 GTGTATGGTCTAGAGGCTCTAGC 59.495 52.174 36.09 30.10 44.65 3.42
516 518 4.980573 AGTGTATGGTCTAGAGGCTCTAG 58.019 47.826 35.48 35.48 45.99 2.43
517 519 4.503469 CGAGTGTATGGTCTAGAGGCTCTA 60.503 50.000 22.30 22.30 0.00 2.43
518 520 3.746114 CGAGTGTATGGTCTAGAGGCTCT 60.746 52.174 22.48 22.48 0.00 4.09
519 521 2.550606 CGAGTGTATGGTCTAGAGGCTC 59.449 54.545 6.34 6.34 0.00 4.70
520 522 2.172930 TCGAGTGTATGGTCTAGAGGCT 59.827 50.000 0.00 0.00 0.00 4.58
521 523 2.550606 CTCGAGTGTATGGTCTAGAGGC 59.449 54.545 3.62 0.00 32.53 4.70
522 524 2.550606 GCTCGAGTGTATGGTCTAGAGG 59.449 54.545 15.13 0.00 35.21 3.69
523 525 3.206964 TGCTCGAGTGTATGGTCTAGAG 58.793 50.000 15.13 0.00 36.81 2.43
524 526 3.277142 TGCTCGAGTGTATGGTCTAGA 57.723 47.619 15.13 0.00 0.00 2.43
525 527 3.304996 CCATGCTCGAGTGTATGGTCTAG 60.305 52.174 24.89 9.57 42.63 2.43
526 528 2.623416 CCATGCTCGAGTGTATGGTCTA 59.377 50.000 24.89 1.49 42.63 2.59
527 529 1.410517 CCATGCTCGAGTGTATGGTCT 59.589 52.381 24.89 0.00 42.63 3.85
528 530 1.858091 CCATGCTCGAGTGTATGGTC 58.142 55.000 24.89 6.45 42.63 4.02
531 533 0.249031 TCGCCATGCTCGAGTGTATG 60.249 55.000 15.13 15.16 0.00 2.39
532 534 0.249073 GTCGCCATGCTCGAGTGTAT 60.249 55.000 15.13 3.78 36.56 2.29
533 535 1.138883 GTCGCCATGCTCGAGTGTA 59.861 57.895 15.13 1.27 36.56 2.90
534 536 2.125912 GTCGCCATGCTCGAGTGT 60.126 61.111 15.13 0.00 36.56 3.55
535 537 2.887568 GGTCGCCATGCTCGAGTG 60.888 66.667 15.13 5.11 36.56 3.51
536 538 4.498520 CGGTCGCCATGCTCGAGT 62.499 66.667 15.13 0.00 36.56 4.18
547 549 4.803426 CTCTGTCCTGCCGGTCGC 62.803 72.222 1.90 0.00 38.31 5.19
548 550 3.343788 GACTCTGTCCTGCCGGTCG 62.344 68.421 1.90 0.00 0.00 4.79
549 551 2.574399 GACTCTGTCCTGCCGGTC 59.426 66.667 1.90 0.00 0.00 4.79
550 552 3.374402 CGACTCTGTCCTGCCGGT 61.374 66.667 1.90 0.00 0.00 5.28
551 553 4.803426 GCGACTCTGTCCTGCCGG 62.803 72.222 0.00 0.00 0.00 6.13
553 555 4.803426 CCGCGACTCTGTCCTGCC 62.803 72.222 8.23 0.00 0.00 4.85
554 556 4.057428 ACCGCGACTCTGTCCTGC 62.057 66.667 8.23 0.00 0.00 4.85
555 557 2.126307 CACCGCGACTCTGTCCTG 60.126 66.667 8.23 0.00 0.00 3.86
556 558 4.057428 GCACCGCGACTCTGTCCT 62.057 66.667 8.23 0.00 0.00 3.85
570 572 2.255252 GATTGGTGGTGCACGCAC 59.745 61.111 22.72 22.72 45.49 5.34
571 573 2.983030 GGATTGGTGGTGCACGCA 60.983 61.111 11.45 7.36 34.83 5.24
572 574 4.101790 CGGATTGGTGGTGCACGC 62.102 66.667 11.45 6.11 34.83 5.34
573 575 3.430862 CCGGATTGGTGGTGCACG 61.431 66.667 11.45 0.00 34.83 5.34
574 576 2.033448 TCCGGATTGGTGGTGCAC 59.967 61.111 8.80 8.80 39.52 4.57
575 577 2.033448 GTCCGGATTGGTGGTGCA 59.967 61.111 7.81 0.00 39.52 4.57
576 578 2.750237 GGTCCGGATTGGTGGTGC 60.750 66.667 7.81 0.00 39.52 5.01
577 579 2.435938 CGGTCCGGATTGGTGGTG 60.436 66.667 7.81 0.00 39.52 4.17
612 614 1.606350 CGCCGAGTCCGCGAAATATC 61.606 60.000 19.22 0.00 37.45 1.63
613 615 1.660575 CGCCGAGTCCGCGAAATAT 60.661 57.895 19.22 0.00 37.45 1.28
614 616 2.278336 CGCCGAGTCCGCGAAATA 60.278 61.111 19.22 0.00 37.45 1.40
624 626 4.541648 ATAGAGGGGGCGCCGAGT 62.542 66.667 22.54 6.54 0.00 4.18
625 627 3.996124 CATAGAGGGGGCGCCGAG 61.996 72.222 22.54 0.00 0.00 4.63
626 628 4.533124 TCATAGAGGGGGCGCCGA 62.533 66.667 22.54 6.29 0.00 5.54
627 629 3.546543 TTCATAGAGGGGGCGCCG 61.547 66.667 22.54 3.46 0.00 6.46
628 630 2.111251 GTTCATAGAGGGGGCGCC 59.889 66.667 21.18 21.18 0.00 6.53
629 631 2.280186 CGTTCATAGAGGGGGCGC 60.280 66.667 0.00 0.00 0.00 6.53
630 632 2.280186 GCGTTCATAGAGGGGGCG 60.280 66.667 0.00 0.00 0.00 6.13
631 633 2.280186 CGCGTTCATAGAGGGGGC 60.280 66.667 0.00 0.00 0.00 5.80
632 634 2.421739 CCGCGTTCATAGAGGGGG 59.578 66.667 4.92 0.00 34.77 5.40
633 635 1.682451 TTCCCGCGTTCATAGAGGGG 61.682 60.000 4.92 0.00 46.85 4.79
635 637 0.174845 TGTTCCCGCGTTCATAGAGG 59.825 55.000 4.92 0.00 0.00 3.69
636 638 2.004583 TTGTTCCCGCGTTCATAGAG 57.995 50.000 4.92 0.00 0.00 2.43
637 639 2.546778 GATTGTTCCCGCGTTCATAGA 58.453 47.619 4.92 0.00 0.00 1.98
638 640 1.597663 GGATTGTTCCCGCGTTCATAG 59.402 52.381 4.92 0.00 35.84 2.23
639 641 1.658994 GGATTGTTCCCGCGTTCATA 58.341 50.000 4.92 0.00 35.84 2.15
640 642 2.477880 GGATTGTTCCCGCGTTCAT 58.522 52.632 4.92 0.00 35.84 2.57
641 643 3.975246 GGATTGTTCCCGCGTTCA 58.025 55.556 4.92 0.00 35.84 3.18
649 651 3.131478 CGCACCCGGGATTGTTCC 61.131 66.667 32.02 2.04 41.77 3.62
688 690 2.799540 GACGATCGTGGCTTTCGGC 61.800 63.158 28.12 3.50 37.20 5.54
689 691 2.505498 CGACGATCGTGGCTTTCGG 61.505 63.158 28.12 2.94 37.20 4.30
690 692 2.987593 CGACGATCGTGGCTTTCG 59.012 61.111 28.12 17.67 38.76 3.46
699 701 1.188769 GAAGACGAGCACGACGATCG 61.189 60.000 14.88 14.88 46.93 3.69
700 702 1.188769 CGAAGACGAGCACGACGATC 61.189 60.000 11.40 7.56 42.66 3.69
701 703 1.226046 CGAAGACGAGCACGACGAT 60.226 57.895 11.40 0.00 42.66 3.73
702 704 2.172659 CGAAGACGAGCACGACGA 59.827 61.111 11.40 0.00 42.66 4.20
703 705 3.524759 GCGAAGACGAGCACGACG 61.525 66.667 11.40 10.95 42.66 5.12
704 706 3.524759 CGCGAAGACGAGCACGAC 61.525 66.667 11.40 3.84 42.66 4.34
705 707 3.923356 GACGCGAAGACGAGCACGA 62.923 63.158 15.93 0.00 42.60 4.35
706 708 3.524759 GACGCGAAGACGAGCACG 61.525 66.667 15.93 0.76 42.60 5.34
707 709 3.173240 GGACGCGAAGACGAGCAC 61.173 66.667 15.93 0.00 42.60 4.40
708 710 3.666253 TGGACGCGAAGACGAGCA 61.666 61.111 15.93 0.00 42.60 4.26
709 711 3.173240 GTGGACGCGAAGACGAGC 61.173 66.667 15.93 0.00 42.60 5.03
710 712 2.870161 CGTGGACGCGAAGACGAG 60.870 66.667 15.93 0.00 44.24 4.18
734 736 3.052082 CAACACTGCTCCCGCTGG 61.052 66.667 0.00 0.00 39.17 4.85
735 737 3.052082 CCAACACTGCTCCCGCTG 61.052 66.667 0.00 0.00 40.51 5.18
736 738 3.241530 TCCAACACTGCTCCCGCT 61.242 61.111 0.00 0.00 36.97 5.52
737 739 2.527951 ATCTCCAACACTGCTCCCGC 62.528 60.000 0.00 0.00 0.00 6.13
738 740 0.742281 CATCTCCAACACTGCTCCCG 60.742 60.000 0.00 0.00 0.00 5.14
739 741 0.393537 CCATCTCCAACACTGCTCCC 60.394 60.000 0.00 0.00 0.00 4.30
740 742 0.615331 TCCATCTCCAACACTGCTCC 59.385 55.000 0.00 0.00 0.00 4.70
741 743 2.479566 TTCCATCTCCAACACTGCTC 57.520 50.000 0.00 0.00 0.00 4.26
742 744 2.957402 TTTCCATCTCCAACACTGCT 57.043 45.000 0.00 0.00 0.00 4.24
743 745 3.319122 ACTTTTTCCATCTCCAACACTGC 59.681 43.478 0.00 0.00 0.00 4.40
744 746 4.823989 AGACTTTTTCCATCTCCAACACTG 59.176 41.667 0.00 0.00 0.00 3.66
745 747 4.823989 CAGACTTTTTCCATCTCCAACACT 59.176 41.667 0.00 0.00 0.00 3.55
746 748 4.821805 TCAGACTTTTTCCATCTCCAACAC 59.178 41.667 0.00 0.00 0.00 3.32
747 749 5.047566 TCAGACTTTTTCCATCTCCAACA 57.952 39.130 0.00 0.00 0.00 3.33
748 750 6.391227 TTTCAGACTTTTTCCATCTCCAAC 57.609 37.500 0.00 0.00 0.00 3.77
749 751 7.601705 ATTTTCAGACTTTTTCCATCTCCAA 57.398 32.000 0.00 0.00 0.00 3.53
750 752 8.576442 GTTATTTTCAGACTTTTTCCATCTCCA 58.424 33.333 0.00 0.00 0.00 3.86
751 753 8.029522 GGTTATTTTCAGACTTTTTCCATCTCC 58.970 37.037 0.00 0.00 0.00 3.71
752 754 8.797438 AGGTTATTTTCAGACTTTTTCCATCTC 58.203 33.333 0.00 0.00 0.00 2.75
866 868 2.952978 TGCAAACAAACGTCTAATGGGT 59.047 40.909 0.00 0.00 0.00 4.51
4010 5885 4.017037 TCTCTCCTGTCCTTCTACTGGATT 60.017 45.833 3.50 0.00 43.84 3.01
4161 6036 6.151691 CACATGCTGCAAGTAATTTTAGTGT 58.848 36.000 10.43 0.76 35.30 3.55


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.