Multiple sequence alignment - TraesCS4A01G419300

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G419300 chr4A 100.000 3083 0 0 1 3083 689138779 689135697 0.000000e+00 5694.0
1 TraesCS4A01G419300 chr4A 89.667 842 40 8 524 1362 689191063 689190266 0.000000e+00 1029.0
2 TraesCS4A01G419300 chr4A 92.199 423 29 3 1692 2114 689187848 689187430 2.050000e-166 595.0
3 TraesCS4A01G419300 chr4A 88.235 204 23 1 980 1182 689184358 689184155 3.070000e-60 243.0
4 TraesCS4A01G419300 chr4A 91.275 149 11 2 1549 1696 689190025 689189878 5.210000e-48 202.0
5 TraesCS4A01G419300 chrUn 92.403 1777 89 6 776 2527 90939701 90937946 0.000000e+00 2492.0
6 TraesCS4A01G419300 chrUn 92.204 1783 93 6 770 2527 90727162 90725401 0.000000e+00 2481.0
7 TraesCS4A01G419300 chrUn 90.185 1243 81 11 354 1581 401027448 401026232 0.000000e+00 1581.0
8 TraesCS4A01G419300 chr7D 91.278 1479 77 25 840 2303 37235222 37233781 0.000000e+00 1969.0
9 TraesCS4A01G419300 chr7D 82.178 303 40 3 543 841 37235558 37235266 6.600000e-62 248.0
10 TraesCS4A01G419300 chr7D 86.932 176 17 2 665 839 37236620 37236450 3.140000e-45 193.0
11 TraesCS4A01G419300 chr7A 92.097 1202 84 6 981 2173 36630239 36629040 0.000000e+00 1683.0
12 TraesCS4A01G419300 chr7A 95.907 562 20 2 2524 3083 708556585 708557145 0.000000e+00 907.0
13 TraesCS4A01G419300 chr7A 83.197 613 65 17 354 939 36630848 36630247 7.570000e-146 527.0
14 TraesCS4A01G419300 chr7A 86.538 104 14 0 2423 2526 652343186 652343289 6.990000e-22 115.0
15 TraesCS4A01G419300 chr7A 89.189 74 8 0 1200 1273 574971676 574971749 3.270000e-15 93.5
16 TraesCS4A01G419300 chr5B 97.666 557 11 1 2529 3083 6879166 6878610 0.000000e+00 955.0
17 TraesCS4A01G419300 chr5B 95.893 560 20 2 2526 3083 482604252 482604810 0.000000e+00 904.0
18 TraesCS4A01G419300 chr5B 94.872 39 2 0 282 320 348582396 348582434 9.230000e-06 62.1
19 TraesCS4A01G419300 chr6B 97.148 561 16 0 2523 3083 711094 710534 0.000000e+00 948.0
20 TraesCS4A01G419300 chr6B 90.000 100 9 1 2423 2521 88877233 88877332 8.970000e-26 128.0
21 TraesCS4A01G419300 chr6B 95.000 40 2 0 281 320 555953967 555953928 2.570000e-06 63.9
22 TraesCS4A01G419300 chr6B 91.111 45 4 0 282 326 310357692 310357736 9.230000e-06 62.1
23 TraesCS4A01G419300 chr3B 96.607 560 17 1 2526 3083 629600488 629601047 0.000000e+00 928.0
24 TraesCS4A01G419300 chr3B 95.856 555 21 1 2531 3083 43730996 43730442 0.000000e+00 896.0
25 TraesCS4A01G419300 chr3B 85.493 841 110 8 1242 2079 807483011 807482180 0.000000e+00 867.0
26 TraesCS4A01G419300 chr3B 84.251 908 119 18 1242 2135 807440575 807439678 0.000000e+00 863.0
27 TraesCS4A01G419300 chr3B 97.297 37 1 0 280 316 483421335 483421299 2.570000e-06 63.9
28 TraesCS4A01G419300 chr3B 94.872 39 1 1 282 320 197781892 197781855 3.320000e-05 60.2
29 TraesCS4A01G419300 chr2B 96.920 552 17 0 2532 3083 693710741 693710190 0.000000e+00 926.0
30 TraesCS4A01G419300 chr3D 96.216 555 19 1 2531 3083 1629413 1628859 0.000000e+00 907.0
31 TraesCS4A01G419300 chr3D 85.071 844 112 8 1240 2079 600529367 600528534 0.000000e+00 848.0
32 TraesCS4A01G419300 chr3D 72.939 946 207 41 1106 2025 600820728 600819806 1.810000e-72 283.0
33 TraesCS4A01G419300 chr3D 72.774 977 209 50 1090 2037 600632373 600633321 8.420000e-71 278.0
34 TraesCS4A01G419300 chr3D 89.524 105 11 0 2423 2527 433801054 433801158 1.930000e-27 134.0
35 TraesCS4A01G419300 chr4B 95.536 560 22 2 2526 3083 362106275 362106833 0.000000e+00 893.0
36 TraesCS4A01G419300 chr3A 85.006 827 116 5 1242 2067 730397967 730398786 0.000000e+00 833.0
37 TraesCS4A01G419300 chr2A 91.346 104 9 0 2423 2526 546334373 546334270 3.200000e-30 143.0
38 TraesCS4A01G419300 chr1A 90.476 105 10 0 2423 2527 175175909 175176013 4.150000e-29 139.0
39 TraesCS4A01G419300 chr1A 97.436 39 1 0 282 320 481924507 481924469 1.980000e-07 67.6
40 TraesCS4A01G419300 chr5A 88.776 98 11 0 2423 2520 120903151 120903248 1.500000e-23 121.0
41 TraesCS4A01G419300 chr4D 88.889 99 10 1 2423 2521 112163514 112163417 1.500000e-23 121.0
42 TraesCS4A01G419300 chr1D 97.436 39 1 0 282 320 381307078 381307040 1.980000e-07 67.6
43 TraesCS4A01G419300 chr1B 97.436 39 1 0 282 320 511444637 511444599 1.980000e-07 67.6
44 TraesCS4A01G419300 chr7B 92.857 42 1 2 282 322 382279264 382279304 3.320000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G419300 chr4A 689135697 689138779 3082 True 5694.000000 5694 100.000 1 3083 1 chr4A.!!$R1 3082
1 TraesCS4A01G419300 chr4A 689184155 689191063 6908 True 517.250000 1029 90.344 524 2114 4 chr4A.!!$R2 1590
2 TraesCS4A01G419300 chrUn 90937946 90939701 1755 True 2492.000000 2492 92.403 776 2527 1 chrUn.!!$R2 1751
3 TraesCS4A01G419300 chrUn 90725401 90727162 1761 True 2481.000000 2481 92.204 770 2527 1 chrUn.!!$R1 1757
4 TraesCS4A01G419300 chrUn 401026232 401027448 1216 True 1581.000000 1581 90.185 354 1581 1 chrUn.!!$R3 1227
5 TraesCS4A01G419300 chr7D 37233781 37236620 2839 True 803.333333 1969 86.796 543 2303 3 chr7D.!!$R1 1760
6 TraesCS4A01G419300 chr7A 36629040 36630848 1808 True 1105.000000 1683 87.647 354 2173 2 chr7A.!!$R1 1819
7 TraesCS4A01G419300 chr7A 708556585 708557145 560 False 907.000000 907 95.907 2524 3083 1 chr7A.!!$F3 559
8 TraesCS4A01G419300 chr5B 6878610 6879166 556 True 955.000000 955 97.666 2529 3083 1 chr5B.!!$R1 554
9 TraesCS4A01G419300 chr5B 482604252 482604810 558 False 904.000000 904 95.893 2526 3083 1 chr5B.!!$F2 557
10 TraesCS4A01G419300 chr6B 710534 711094 560 True 948.000000 948 97.148 2523 3083 1 chr6B.!!$R1 560
11 TraesCS4A01G419300 chr3B 629600488 629601047 559 False 928.000000 928 96.607 2526 3083 1 chr3B.!!$F1 557
12 TraesCS4A01G419300 chr3B 43730442 43730996 554 True 896.000000 896 95.856 2531 3083 1 chr3B.!!$R1 552
13 TraesCS4A01G419300 chr3B 807482180 807483011 831 True 867.000000 867 85.493 1242 2079 1 chr3B.!!$R5 837
14 TraesCS4A01G419300 chr3B 807439678 807440575 897 True 863.000000 863 84.251 1242 2135 1 chr3B.!!$R4 893
15 TraesCS4A01G419300 chr2B 693710190 693710741 551 True 926.000000 926 96.920 2532 3083 1 chr2B.!!$R1 551
16 TraesCS4A01G419300 chr3D 1628859 1629413 554 True 907.000000 907 96.216 2531 3083 1 chr3D.!!$R1 552
17 TraesCS4A01G419300 chr3D 600528534 600529367 833 True 848.000000 848 85.071 1240 2079 1 chr3D.!!$R2 839
18 TraesCS4A01G419300 chr3D 600819806 600820728 922 True 283.000000 283 72.939 1106 2025 1 chr3D.!!$R3 919
19 TraesCS4A01G419300 chr3D 600632373 600633321 948 False 278.000000 278 72.774 1090 2037 1 chr3D.!!$F2 947
20 TraesCS4A01G419300 chr4B 362106275 362106833 558 False 893.000000 893 95.536 2526 3083 1 chr4B.!!$F1 557
21 TraesCS4A01G419300 chr3A 730397967 730398786 819 False 833.000000 833 85.006 1242 2067 1 chr3A.!!$F1 825

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
126 127 0.032912 TGCACCGGATACACTCCCTA 60.033 55.0 9.46 0.0 41.49 3.53 F
449 450 0.107116 ACGACTCTACTCCCTCGCAT 60.107 55.0 0.00 0.0 0.00 4.73 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1833 4619 0.679505 CGTTGGTGAAGAGGTCCTGA 59.32 55.0 0.0 0.0 0.0 3.86 R
2389 5664 0.680280 GCTGGACCCTCTAGACGACA 60.68 60.0 0.0 0.0 0.0 4.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 7.990541 TTTGAGAGAACAAACATTGAATGTG 57.009 32.000 12.09 2.90 44.07 3.21
30 31 5.522456 TGAGAGAACAAACATTGAATGTGC 58.478 37.500 12.09 0.10 44.07 4.57
31 32 5.300034 TGAGAGAACAAACATTGAATGTGCT 59.700 36.000 12.09 4.82 44.07 4.40
32 33 6.486320 TGAGAGAACAAACATTGAATGTGCTA 59.514 34.615 12.09 0.00 44.07 3.49
33 34 7.013178 TGAGAGAACAAACATTGAATGTGCTAA 59.987 33.333 12.09 0.00 44.07 3.09
34 35 7.715657 AGAGAACAAACATTGAATGTGCTAAA 58.284 30.769 12.09 0.00 44.07 1.85
35 36 7.649306 AGAGAACAAACATTGAATGTGCTAAAC 59.351 33.333 12.09 3.08 44.07 2.01
36 37 7.491682 AGAACAAACATTGAATGTGCTAAACT 58.508 30.769 12.09 5.20 44.07 2.66
37 38 7.981225 AGAACAAACATTGAATGTGCTAAACTT 59.019 29.630 12.09 0.00 44.07 2.66
39 40 8.491331 ACAAACATTGAATGTGCTAAACTTTT 57.509 26.923 12.09 0.00 44.07 2.27
40 41 8.945057 ACAAACATTGAATGTGCTAAACTTTTT 58.055 25.926 12.09 0.00 44.07 1.94
73 74 9.921637 TTTTGAAACCTTATAAAATGTGCTAGG 57.078 29.630 0.00 0.00 0.00 3.02
74 75 8.871629 TTGAAACCTTATAAAATGTGCTAGGA 57.128 30.769 0.00 0.00 0.00 2.94
75 76 8.506168 TGAAACCTTATAAAATGTGCTAGGAG 57.494 34.615 0.00 0.00 0.00 3.69
76 77 7.556275 TGAAACCTTATAAAATGTGCTAGGAGG 59.444 37.037 0.00 0.00 0.00 4.30
78 79 6.592870 ACCTTATAAAATGTGCTAGGAGGTC 58.407 40.000 0.00 0.00 0.00 3.85
79 80 5.998363 CCTTATAAAATGTGCTAGGAGGTCC 59.002 44.000 0.00 0.00 0.00 4.46
81 82 0.541863 AAATGTGCTAGGAGGTCCGG 59.458 55.000 0.00 0.00 42.08 5.14
82 83 0.617820 AATGTGCTAGGAGGTCCGGT 60.618 55.000 0.00 0.00 42.08 5.28
83 84 0.617820 ATGTGCTAGGAGGTCCGGTT 60.618 55.000 0.00 0.00 42.08 4.44
84 85 1.255667 TGTGCTAGGAGGTCCGGTTC 61.256 60.000 0.00 0.00 42.08 3.62
85 86 1.077805 TGCTAGGAGGTCCGGTTCA 59.922 57.895 0.00 0.00 42.08 3.18
97 98 4.366603 GGTTCACCGGTACACCAC 57.633 61.111 23.70 10.01 35.14 4.16
98 99 1.446791 GGTTCACCGGTACACCACA 59.553 57.895 23.70 0.00 35.14 4.17
99 100 0.179051 GGTTCACCGGTACACCACAA 60.179 55.000 23.70 1.01 35.14 3.33
100 101 1.223187 GTTCACCGGTACACCACAAG 58.777 55.000 6.87 0.00 35.14 3.16
103 104 1.227734 ACCGGTACACCACAAGCAC 60.228 57.895 4.49 0.00 35.14 4.40
104 105 1.964373 CCGGTACACCACAAGCACC 60.964 63.158 0.00 0.00 35.14 5.01
105 106 2.314647 CGGTACACCACAAGCACCG 61.315 63.158 0.00 0.00 45.25 4.94
106 107 1.964373 GGTACACCACAAGCACCGG 60.964 63.158 0.00 0.00 35.64 5.28
122 123 4.515404 GGTGCACCGGATACACTC 57.485 61.111 22.49 3.94 34.70 3.51
123 124 1.153429 GGTGCACCGGATACACTCC 60.153 63.158 22.49 0.00 41.07 3.85
125 126 1.305802 TGCACCGGATACACTCCCT 60.306 57.895 9.46 0.00 41.49 4.20
126 127 0.032912 TGCACCGGATACACTCCCTA 60.033 55.000 9.46 0.00 41.49 3.53
127 128 0.674534 GCACCGGATACACTCCCTAG 59.325 60.000 9.46 0.00 41.49 3.02
129 130 0.822532 ACCGGATACACTCCCTAGCG 60.823 60.000 9.46 0.00 41.49 4.26
131 132 1.452953 CGGATACACTCCCTAGCGCA 61.453 60.000 11.47 0.00 41.49 6.09
133 134 1.033574 GATACACTCCCTAGCGCACT 58.966 55.000 11.47 0.00 0.00 4.40
135 136 0.323087 TACACTCCCTAGCGCACTGA 60.323 55.000 11.47 0.00 0.00 3.41
136 137 0.972983 ACACTCCCTAGCGCACTGAT 60.973 55.000 11.47 0.00 0.00 2.90
141 142 1.341209 TCCCTAGCGCACTGATATGTG 59.659 52.381 11.47 0.00 40.62 3.21
143 144 1.341209 CCTAGCGCACTGATATGTGGA 59.659 52.381 11.47 0.00 38.31 4.02
144 145 2.398498 CTAGCGCACTGATATGTGGAC 58.602 52.381 11.47 0.00 38.31 4.02
145 146 0.179073 AGCGCACTGATATGTGGACC 60.179 55.000 11.47 0.00 38.31 4.46
146 147 0.461870 GCGCACTGATATGTGGACCA 60.462 55.000 0.30 0.00 38.31 4.02
148 149 1.869132 CGCACTGATATGTGGACCATG 59.131 52.381 0.00 0.00 38.31 3.66
151 152 3.483421 CACTGATATGTGGACCATGCAT 58.517 45.455 0.00 0.00 34.86 3.96
152 153 3.501062 CACTGATATGTGGACCATGCATC 59.499 47.826 0.00 1.43 34.86 3.91
153 154 3.079578 CTGATATGTGGACCATGCATCC 58.920 50.000 0.00 0.00 34.86 3.51
154 155 2.079158 GATATGTGGACCATGCATCCG 58.921 52.381 0.00 0.00 39.30 4.18
155 156 0.836606 TATGTGGACCATGCATCCGT 59.163 50.000 0.00 0.00 39.30 4.69
156 157 0.836606 ATGTGGACCATGCATCCGTA 59.163 50.000 0.00 0.00 39.30 4.02
157 158 0.107897 TGTGGACCATGCATCCGTAC 60.108 55.000 0.00 0.00 39.30 3.67
158 159 0.107897 GTGGACCATGCATCCGTACA 60.108 55.000 0.00 0.00 39.30 2.90
159 160 0.107897 TGGACCATGCATCCGTACAC 60.108 55.000 0.00 0.00 39.30 2.90
185 186 2.438975 CCAGTGGCCGCACATCAT 60.439 61.111 20.59 0.00 0.00 2.45
186 187 2.767445 CCAGTGGCCGCACATCATG 61.767 63.158 20.59 6.53 0.00 3.07
187 188 2.438975 AGTGGCCGCACATCATGG 60.439 61.111 20.59 0.00 0.00 3.66
188 189 2.751436 GTGGCCGCACATCATGGT 60.751 61.111 12.58 0.00 0.00 3.55
189 190 2.751036 TGGCCGCACATCATGGTG 60.751 61.111 3.86 3.86 41.72 4.17
196 197 1.135939 CACATCATGGTGCAGTGCG 59.864 57.895 11.20 0.00 31.10 5.34
197 198 1.302752 ACATCATGGTGCAGTGCGT 60.303 52.632 11.20 0.00 0.00 5.24
201 202 2.359107 ATGGTGCAGTGCGTCAGG 60.359 61.111 11.20 0.00 0.00 3.86
202 203 3.907260 ATGGTGCAGTGCGTCAGGG 62.907 63.158 11.20 0.00 0.00 4.45
205 206 3.555324 TGCAGTGCGTCAGGGGAA 61.555 61.111 11.20 0.00 0.00 3.97
206 207 3.050275 GCAGTGCGTCAGGGGAAC 61.050 66.667 0.00 0.00 0.00 3.62
224 225 5.712152 GGAACCAACTCTGTTCATTCATT 57.288 39.130 5.61 0.00 43.05 2.57
225 226 5.464168 GGAACCAACTCTGTTCATTCATTG 58.536 41.667 5.61 0.00 43.05 2.82
226 227 4.510038 ACCAACTCTGTTCATTCATTGC 57.490 40.909 0.00 0.00 0.00 3.56
227 228 3.256631 ACCAACTCTGTTCATTCATTGCC 59.743 43.478 0.00 0.00 0.00 4.52
228 229 3.508793 CCAACTCTGTTCATTCATTGCCT 59.491 43.478 0.00 0.00 0.00 4.75
231 232 3.760684 ACTCTGTTCATTCATTGCCTTCC 59.239 43.478 0.00 0.00 0.00 3.46
234 235 4.834496 TCTGTTCATTCATTGCCTTCCTTT 59.166 37.500 0.00 0.00 0.00 3.11
235 236 6.009589 TCTGTTCATTCATTGCCTTCCTTTA 58.990 36.000 0.00 0.00 0.00 1.85
236 237 6.151648 TCTGTTCATTCATTGCCTTCCTTTAG 59.848 38.462 0.00 0.00 0.00 1.85
237 238 6.009589 TGTTCATTCATTGCCTTCCTTTAGA 58.990 36.000 0.00 0.00 0.00 2.10
238 239 6.151648 TGTTCATTCATTGCCTTCCTTTAGAG 59.848 38.462 0.00 0.00 0.00 2.43
239 240 4.641989 TCATTCATTGCCTTCCTTTAGAGC 59.358 41.667 0.00 0.00 0.00 4.09
241 242 4.240881 TCATTGCCTTCCTTTAGAGCAT 57.759 40.909 0.00 0.00 32.67 3.79
242 243 3.949754 TCATTGCCTTCCTTTAGAGCATG 59.050 43.478 0.00 0.00 32.67 4.06
243 244 3.719268 TTGCCTTCCTTTAGAGCATGA 57.281 42.857 0.00 0.00 32.67 3.07
244 245 3.939740 TGCCTTCCTTTAGAGCATGAT 57.060 42.857 0.00 0.00 0.00 2.45
246 247 3.054139 TGCCTTCCTTTAGAGCATGATGT 60.054 43.478 0.00 0.00 0.00 3.06
251 252 7.646314 CCTTCCTTTAGAGCATGATGTAAATG 58.354 38.462 12.98 10.75 0.00 2.32
256 257 6.609237 TTAGAGCATGATGTAAATGTCTGC 57.391 37.500 0.00 0.00 0.00 4.26
257 258 4.520179 AGAGCATGATGTAAATGTCTGCA 58.480 39.130 0.00 0.00 0.00 4.41
258 259 5.131067 AGAGCATGATGTAAATGTCTGCAT 58.869 37.500 0.00 0.00 36.80 3.96
259 260 5.008712 AGAGCATGATGTAAATGTCTGCATG 59.991 40.000 0.00 0.00 35.15 4.06
260 261 4.643334 AGCATGATGTAAATGTCTGCATGT 59.357 37.500 0.00 0.00 35.15 3.21
261 262 5.126545 AGCATGATGTAAATGTCTGCATGTT 59.873 36.000 0.00 0.00 35.15 2.71
262 263 5.808540 GCATGATGTAAATGTCTGCATGTTT 59.191 36.000 0.00 0.00 35.15 2.83
263 264 6.237728 GCATGATGTAAATGTCTGCATGTTTG 60.238 38.462 0.00 0.00 35.15 2.93
265 266 6.614160 TGATGTAAATGTCTGCATGTTTGAG 58.386 36.000 0.00 0.00 35.15 3.02
267 268 6.822667 TGTAAATGTCTGCATGTTTGAGAT 57.177 33.333 0.00 0.00 35.15 2.75
269 270 5.970317 AAATGTCTGCATGTTTGAGATGA 57.030 34.783 0.00 0.00 35.15 2.92
272 273 3.999001 TGTCTGCATGTTTGAGATGAGTC 59.001 43.478 0.00 0.00 0.00 3.36
273 274 4.252073 GTCTGCATGTTTGAGATGAGTCT 58.748 43.478 0.00 0.00 37.42 3.24
274 275 7.345958 ATGTCTGCATGTTTGAGATGAGTCTC 61.346 42.308 0.00 0.00 41.43 3.36
275 276 9.626831 ATGTCTGCATGTTTGAGATGAGTCTCA 62.627 40.741 4.68 4.68 44.91 3.27
287 288 5.026121 AGATGAGTCTCAATAGTGTCCCAA 58.974 41.667 6.64 0.00 0.00 4.12
289 290 5.560722 TGAGTCTCAATAGTGTCCCAAAA 57.439 39.130 0.00 0.00 0.00 2.44
290 291 6.126863 TGAGTCTCAATAGTGTCCCAAAAT 57.873 37.500 0.00 0.00 0.00 1.82
292 293 7.685481 TGAGTCTCAATAGTGTCCCAAAATAA 58.315 34.615 0.00 0.00 0.00 1.40
293 294 7.824289 TGAGTCTCAATAGTGTCCCAAAATAAG 59.176 37.037 0.00 0.00 0.00 1.73
295 296 7.607991 AGTCTCAATAGTGTCCCAAAATAAGTG 59.392 37.037 0.00 0.00 0.00 3.16
297 298 7.606456 TCTCAATAGTGTCCCAAAATAAGTGTC 59.394 37.037 0.00 0.00 0.00 3.67
298 299 6.370442 TCAATAGTGTCCCAAAATAAGTGTCG 59.630 38.462 0.00 0.00 0.00 4.35
299 300 2.812011 AGTGTCCCAAAATAAGTGTCGC 59.188 45.455 0.00 0.00 0.00 5.19
300 301 2.812011 GTGTCCCAAAATAAGTGTCGCT 59.188 45.455 0.00 0.00 0.00 4.93
301 302 2.811431 TGTCCCAAAATAAGTGTCGCTG 59.189 45.455 0.00 0.00 0.00 5.18
303 304 3.689649 GTCCCAAAATAAGTGTCGCTGAT 59.310 43.478 0.00 0.00 0.00 2.90
304 305 4.156008 GTCCCAAAATAAGTGTCGCTGATT 59.844 41.667 0.00 0.00 29.37 2.57
306 307 5.941058 TCCCAAAATAAGTGTCGCTGATTTA 59.059 36.000 8.84 0.00 37.29 1.40
307 308 6.093495 TCCCAAAATAAGTGTCGCTGATTTAG 59.907 38.462 8.84 4.74 37.29 1.85
313 314 9.821662 AAATAAGTGTCGCTGATTTAGTAAAAC 57.178 29.630 6.91 0.00 36.68 2.43
314 315 8.773404 ATAAGTGTCGCTGATTTAGTAAAACT 57.227 30.769 0.00 0.00 0.00 2.66
316 317 7.118422 AGTGTCGCTGATTTAGTAAAACTTC 57.882 36.000 0.00 0.00 0.00 3.01
317 318 6.704493 AGTGTCGCTGATTTAGTAAAACTTCA 59.296 34.615 0.00 0.00 0.00 3.02
318 319 7.010023 GTGTCGCTGATTTAGTAAAACTTCAG 58.990 38.462 15.77 15.77 35.89 3.02
319 320 6.704493 TGTCGCTGATTTAGTAAAACTTCAGT 59.296 34.615 19.00 0.00 35.51 3.41
320 321 7.225931 TGTCGCTGATTTAGTAAAACTTCAGTT 59.774 33.333 19.00 0.00 35.51 3.16
321 322 7.530861 GTCGCTGATTTAGTAAAACTTCAGTTG 59.469 37.037 19.00 14.29 35.51 3.16
322 323 6.797033 CGCTGATTTAGTAAAACTTCAGTTGG 59.203 38.462 19.00 10.07 35.51 3.77
323 324 7.084486 GCTGATTTAGTAAAACTTCAGTTGGG 58.916 38.462 19.00 3.21 35.51 4.12
336 337 9.807921 AAACTTCAGTTGGGATATTCTTAGAAA 57.192 29.630 0.00 0.00 38.44 2.52
337 338 9.807921 AACTTCAGTTGGGATATTCTTAGAAAA 57.192 29.630 0.00 0.00 36.80 2.29
338 339 9.981460 ACTTCAGTTGGGATATTCTTAGAAAAT 57.019 29.630 0.00 0.00 0.00 1.82
340 341 9.753674 TTCAGTTGGGATATTCTTAGAAAATGT 57.246 29.630 0.00 0.00 0.00 2.71
369 370 7.611213 AGTTTCATTACTGGACTATTTTCCG 57.389 36.000 0.00 0.00 38.69 4.30
370 371 7.391620 AGTTTCATTACTGGACTATTTTCCGA 58.608 34.615 0.00 0.00 38.69 4.55
372 373 8.674607 GTTTCATTACTGGACTATTTTCCGAAT 58.325 33.333 0.00 0.00 38.69 3.34
373 374 8.801882 TTCATTACTGGACTATTTTCCGAATT 57.198 30.769 0.00 0.00 38.69 2.17
374 375 8.208718 TCATTACTGGACTATTTTCCGAATTG 57.791 34.615 0.00 0.00 38.69 2.32
375 376 7.827236 TCATTACTGGACTATTTTCCGAATTGT 59.173 33.333 0.00 0.00 38.69 2.71
376 377 7.605410 TTACTGGACTATTTTCCGAATTGTC 57.395 36.000 5.25 5.25 38.69 3.18
408 409 6.618287 TTTTTCTTCAGACACGTGATGAAT 57.382 33.333 28.21 8.14 39.21 2.57
410 411 7.905604 TTTTCTTCAGACACGTGATGAATAT 57.094 32.000 28.21 6.82 39.21 1.28
411 412 6.892310 TTCTTCAGACACGTGATGAATATG 57.108 37.500 28.21 20.89 36.31 1.78
414 415 4.363138 TCAGACACGTGATGAATATGCTC 58.637 43.478 25.01 4.87 0.00 4.26
415 416 3.181178 CAGACACGTGATGAATATGCTCG 59.819 47.826 25.01 0.00 0.00 5.03
416 417 2.472861 GACACGTGATGAATATGCTCGG 59.527 50.000 25.01 0.00 0.00 4.63
417 418 2.159099 ACACGTGATGAATATGCTCGGT 60.159 45.455 25.01 0.00 0.00 4.69
418 419 2.866156 CACGTGATGAATATGCTCGGTT 59.134 45.455 10.90 0.00 0.00 4.44
419 420 2.866156 ACGTGATGAATATGCTCGGTTG 59.134 45.455 0.00 0.00 0.00 3.77
420 421 3.123050 CGTGATGAATATGCTCGGTTGA 58.877 45.455 0.00 0.00 0.00 3.18
421 422 3.742882 CGTGATGAATATGCTCGGTTGAT 59.257 43.478 0.00 0.00 0.00 2.57
422 423 4.143242 CGTGATGAATATGCTCGGTTGATC 60.143 45.833 0.00 0.00 0.00 2.92
423 424 4.751600 GTGATGAATATGCTCGGTTGATCA 59.248 41.667 0.00 0.00 0.00 2.92
424 425 5.237127 GTGATGAATATGCTCGGTTGATCAA 59.763 40.000 3.38 3.38 29.63 2.57
425 426 5.821995 TGATGAATATGCTCGGTTGATCAAA 59.178 36.000 10.35 0.00 0.00 2.69
427 428 6.507958 TGAATATGCTCGGTTGATCAAAAA 57.492 33.333 10.35 0.00 0.00 1.94
445 446 3.938289 AAAACACGACTCTACTCCCTC 57.062 47.619 0.00 0.00 0.00 4.30
446 447 1.451067 AACACGACTCTACTCCCTCG 58.549 55.000 0.00 0.00 0.00 4.63
447 448 1.025647 ACACGACTCTACTCCCTCGC 61.026 60.000 0.00 0.00 0.00 5.03
448 449 1.025113 CACGACTCTACTCCCTCGCA 61.025 60.000 0.00 0.00 0.00 5.10
449 450 0.107116 ACGACTCTACTCCCTCGCAT 60.107 55.000 0.00 0.00 0.00 4.73
450 451 1.025812 CGACTCTACTCCCTCGCATT 58.974 55.000 0.00 0.00 0.00 3.56
451 452 1.405821 CGACTCTACTCCCTCGCATTT 59.594 52.381 0.00 0.00 0.00 2.32
452 453 2.159226 CGACTCTACTCCCTCGCATTTT 60.159 50.000 0.00 0.00 0.00 1.82
453 454 3.676324 CGACTCTACTCCCTCGCATTTTT 60.676 47.826 0.00 0.00 0.00 1.94
475 476 4.897509 TTCTTGTGTGATCTCCTGTGAT 57.102 40.909 0.00 0.00 0.00 3.06
476 477 4.897509 TCTTGTGTGATCTCCTGTGATT 57.102 40.909 0.00 0.00 0.00 2.57
477 478 5.233083 TCTTGTGTGATCTCCTGTGATTT 57.767 39.130 0.00 0.00 0.00 2.17
478 479 4.999311 TCTTGTGTGATCTCCTGTGATTTG 59.001 41.667 0.00 0.00 0.00 2.32
479 480 4.356405 TGTGTGATCTCCTGTGATTTGT 57.644 40.909 0.00 0.00 0.00 2.83
480 481 4.717877 TGTGTGATCTCCTGTGATTTGTT 58.282 39.130 0.00 0.00 0.00 2.83
482 483 5.593909 TGTGTGATCTCCTGTGATTTGTTTT 59.406 36.000 0.00 0.00 0.00 2.43
483 484 6.145535 GTGTGATCTCCTGTGATTTGTTTTC 58.854 40.000 0.00 0.00 0.00 2.29
484 485 5.827267 TGTGATCTCCTGTGATTTGTTTTCA 59.173 36.000 0.00 0.00 0.00 2.69
485 486 6.491062 TGTGATCTCCTGTGATTTGTTTTCAT 59.509 34.615 0.00 0.00 0.00 2.57
486 487 7.014518 TGTGATCTCCTGTGATTTGTTTTCATT 59.985 33.333 0.00 0.00 0.00 2.57
488 489 8.733458 TGATCTCCTGTGATTTGTTTTCATTAG 58.267 33.333 0.00 0.00 0.00 1.73
489 490 6.913170 TCTCCTGTGATTTGTTTTCATTAGC 58.087 36.000 0.00 0.00 0.00 3.09
490 491 6.024552 TCCTGTGATTTGTTTTCATTAGCC 57.975 37.500 0.00 0.00 0.00 3.93
491 492 5.538053 TCCTGTGATTTGTTTTCATTAGCCA 59.462 36.000 0.00 0.00 0.00 4.75
492 493 6.041409 TCCTGTGATTTGTTTTCATTAGCCAA 59.959 34.615 0.00 0.00 0.00 4.52
493 494 6.705381 CCTGTGATTTGTTTTCATTAGCCAAA 59.295 34.615 0.00 0.00 0.00 3.28
494 495 7.388500 CCTGTGATTTGTTTTCATTAGCCAAAT 59.612 33.333 0.00 0.00 38.16 2.32
499 500 7.489574 TTTGTTTTCATTAGCCAAATCAACC 57.510 32.000 0.00 0.00 0.00 3.77
500 501 5.546526 TGTTTTCATTAGCCAAATCAACCC 58.453 37.500 0.00 0.00 0.00 4.11
503 504 4.591321 TCATTAGCCAAATCAACCCTCT 57.409 40.909 0.00 0.00 0.00 3.69
504 505 4.526970 TCATTAGCCAAATCAACCCTCTC 58.473 43.478 0.00 0.00 0.00 3.20
505 506 4.228210 TCATTAGCCAAATCAACCCTCTCT 59.772 41.667 0.00 0.00 0.00 3.10
506 507 4.657814 TTAGCCAAATCAACCCTCTCTT 57.342 40.909 0.00 0.00 0.00 2.85
507 508 2.800250 AGCCAAATCAACCCTCTCTTG 58.200 47.619 0.00 0.00 0.00 3.02
512 513 5.259632 CCAAATCAACCCTCTCTTGAATCT 58.740 41.667 0.00 0.00 31.48 2.40
514 515 6.886459 CCAAATCAACCCTCTCTTGAATCTAA 59.114 38.462 0.00 0.00 31.48 2.10
515 516 7.394359 CCAAATCAACCCTCTCTTGAATCTAAA 59.606 37.037 0.00 0.00 31.48 1.85
517 518 6.433847 TCAACCCTCTCTTGAATCTAAACA 57.566 37.500 0.00 0.00 0.00 2.83
519 520 6.936900 TCAACCCTCTCTTGAATCTAAACAAG 59.063 38.462 0.00 0.00 43.03 3.16
520 521 5.249420 ACCCTCTCTTGAATCTAAACAAGC 58.751 41.667 0.00 0.00 41.91 4.01
521 522 5.221925 ACCCTCTCTTGAATCTAAACAAGCA 60.222 40.000 0.00 0.00 41.91 3.91
522 523 5.123027 CCCTCTCTTGAATCTAAACAAGCAC 59.877 44.000 0.00 0.00 41.91 4.40
779 1318 4.597507 ACCTGTTCCAATCCTTAGACAAGA 59.402 41.667 0.00 0.00 33.20 3.02
799 1338 1.251527 GGTTGAGCCTCGACTCTGGA 61.252 60.000 11.81 0.00 37.58 3.86
958 1573 2.033141 GCAGAGCAGTCCAGGCAA 59.967 61.111 0.00 0.00 0.00 4.52
976 1591 2.051804 AAACGCAGCTGCTGTGACAC 62.052 55.000 40.28 19.58 43.78 3.67
1016 1633 2.107953 GATGGCTCGTGCTCCTCC 59.892 66.667 9.61 0.00 39.59 4.30
1032 1649 1.667154 CTCCGCTAGCAGCAGTGGTA 61.667 60.000 16.45 8.99 44.94 3.25
1044 1667 4.016706 GTGGTAGTGGCGGTGGCT 62.017 66.667 0.00 0.00 39.81 4.75
1081 1704 1.305549 CTTGGGCATGGGGCTTCTT 60.306 57.895 0.00 0.00 44.01 2.52
1332 1956 3.842923 CTCACGCTCCGCCCATCT 61.843 66.667 0.00 0.00 0.00 2.90
1724 4510 2.526873 ACTGAAGGGGACGTGCCT 60.527 61.111 26.18 6.84 36.66 4.75
1833 4619 2.128507 GGGGCTCTTCGTCTCCGAT 61.129 63.158 0.00 0.00 43.80 4.18
2196 5024 8.296713 CCAAATTTTTCTTCATAGAACGGAGAA 58.703 33.333 0.00 0.00 40.04 2.87
2238 5470 8.313292 CCTATGAGATAGCTAGCTTGAAGAAAT 58.687 37.037 24.88 8.21 0.00 2.17
2367 5642 3.058016 ACATCAAGAAACACCTGATTGCG 60.058 43.478 0.00 0.00 0.00 4.85
2382 5657 0.662619 TTGCGAGCAAACCAGTCAAG 59.337 50.000 8.17 0.00 32.44 3.02
2388 5663 2.354821 GAGCAAACCAGTCAAGTTTCGT 59.645 45.455 0.00 0.00 35.28 3.85
2389 5664 2.752903 AGCAAACCAGTCAAGTTTCGTT 59.247 40.909 0.00 0.00 35.28 3.85
2425 6296 6.465035 GGGTCCAGCTTTATCATTGTCTAGAT 60.465 42.308 0.00 0.00 0.00 1.98
2460 6331 6.896969 GCTATCTTCAGCCAATTTAGATGAC 58.103 40.000 0.00 0.00 35.40 3.06
2463 6334 5.487433 TCTTCAGCCAATTTAGATGACGAA 58.513 37.500 0.00 0.00 0.00 3.85
2496 6367 2.295253 AAGTGTGTAGGCATCGTAGC 57.705 50.000 0.00 0.00 0.00 3.58
2514 6385 1.066430 AGCTTGTTCTTTATCGCCGGA 60.066 47.619 5.05 0.00 0.00 5.14
2919 6898 2.554370 TAGAACAGGTTTTCACCCCG 57.446 50.000 0.00 0.00 45.63 5.73
3024 7386 3.320879 CTCTGCCCATGAGCACCGT 62.321 63.158 0.00 0.00 38.00 4.83
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 9.603921 ACATTCAATGTTTGTTCTCTCAAAATT 57.396 25.926 0.00 0.00 41.63 1.82
3 4 9.037737 CACATTCAATGTTTGTTCTCTCAAAAT 57.962 29.630 0.00 0.00 42.70 1.82
4 5 7.010367 GCACATTCAATGTTTGTTCTCTCAAAA 59.990 33.333 0.00 0.00 42.70 2.44
5 6 6.476380 GCACATTCAATGTTTGTTCTCTCAAA 59.524 34.615 0.00 0.00 42.70 2.69
6 7 5.978919 GCACATTCAATGTTTGTTCTCTCAA 59.021 36.000 0.00 0.00 42.70 3.02
8 9 5.766222 AGCACATTCAATGTTTGTTCTCTC 58.234 37.500 0.00 0.00 42.70 3.20
9 10 5.779529 AGCACATTCAATGTTTGTTCTCT 57.220 34.783 0.00 0.00 42.70 3.10
12 13 7.698836 AGTTTAGCACATTCAATGTTTGTTC 57.301 32.000 0.00 0.00 42.70 3.18
13 14 8.491331 AAAGTTTAGCACATTCAATGTTTGTT 57.509 26.923 0.00 0.00 42.70 2.83
14 15 8.491331 AAAAGTTTAGCACATTCAATGTTTGT 57.509 26.923 0.00 0.00 42.70 2.83
47 48 9.921637 CCTAGCACATTTTATAAGGTTTCAAAA 57.078 29.630 0.00 0.00 0.00 2.44
48 49 9.303116 TCCTAGCACATTTTATAAGGTTTCAAA 57.697 29.630 0.00 0.00 0.00 2.69
49 50 8.871629 TCCTAGCACATTTTATAAGGTTTCAA 57.128 30.769 0.00 0.00 0.00 2.69
50 51 7.556275 CCTCCTAGCACATTTTATAAGGTTTCA 59.444 37.037 0.00 0.00 0.00 2.69
51 52 7.556635 ACCTCCTAGCACATTTTATAAGGTTTC 59.443 37.037 0.00 0.00 29.30 2.78
52 53 7.410991 ACCTCCTAGCACATTTTATAAGGTTT 58.589 34.615 0.00 0.00 29.30 3.27
53 54 6.970191 ACCTCCTAGCACATTTTATAAGGTT 58.030 36.000 0.00 0.00 29.30 3.50
54 55 6.409349 GGACCTCCTAGCACATTTTATAAGGT 60.409 42.308 0.00 0.00 36.16 3.50
55 56 5.998363 GGACCTCCTAGCACATTTTATAAGG 59.002 44.000 0.00 0.00 0.00 2.69
57 58 5.454187 CCGGACCTCCTAGCACATTTTATAA 60.454 44.000 0.00 0.00 0.00 0.98
58 59 4.039973 CCGGACCTCCTAGCACATTTTATA 59.960 45.833 0.00 0.00 0.00 0.98
60 61 2.169769 CCGGACCTCCTAGCACATTTTA 59.830 50.000 0.00 0.00 0.00 1.52
62 63 0.541863 CCGGACCTCCTAGCACATTT 59.458 55.000 0.00 0.00 0.00 2.32
63 64 0.617820 ACCGGACCTCCTAGCACATT 60.618 55.000 9.46 0.00 0.00 2.71
64 65 0.617820 AACCGGACCTCCTAGCACAT 60.618 55.000 9.46 0.00 0.00 3.21
65 66 1.229082 AACCGGACCTCCTAGCACA 60.229 57.895 9.46 0.00 0.00 4.57
67 68 1.077805 TGAACCGGACCTCCTAGCA 59.922 57.895 9.46 0.00 0.00 3.49
68 69 1.516423 GTGAACCGGACCTCCTAGC 59.484 63.158 9.46 0.00 0.00 3.42
69 70 2.200052 GGTGAACCGGACCTCCTAG 58.800 63.158 9.46 0.00 0.00 3.02
81 82 1.223187 CTTGTGGTGTACCGGTGAAC 58.777 55.000 19.93 15.14 39.43 3.18
82 83 0.533308 GCTTGTGGTGTACCGGTGAA 60.533 55.000 19.93 1.22 39.43 3.18
83 84 1.070105 GCTTGTGGTGTACCGGTGA 59.930 57.895 19.93 0.00 39.43 4.02
84 85 1.227704 TGCTTGTGGTGTACCGGTG 60.228 57.895 19.93 0.00 39.43 4.94
85 86 1.227734 GTGCTTGTGGTGTACCGGT 60.228 57.895 13.98 13.98 39.43 5.28
88 89 1.964373 CCGGTGCTTGTGGTGTACC 60.964 63.158 0.00 0.00 36.94 3.34
89 90 1.227734 ACCGGTGCTTGTGGTGTAC 60.228 57.895 6.12 0.00 33.91 2.90
90 91 1.227704 CACCGGTGCTTGTGGTGTA 60.228 57.895 24.02 0.00 46.36 2.90
91 92 2.515991 CACCGGTGCTTGTGGTGT 60.516 61.111 24.02 0.00 46.36 4.16
105 106 1.153429 GGAGTGTATCCGGTGCACC 60.153 63.158 26.78 26.78 43.59 5.01
106 107 4.515404 GGAGTGTATCCGGTGCAC 57.485 61.111 8.80 8.80 42.97 4.57
114 115 1.033574 AGTGCGCTAGGGAGTGTATC 58.966 55.000 11.61 0.00 35.48 2.24
115 116 0.747255 CAGTGCGCTAGGGAGTGTAT 59.253 55.000 11.61 0.00 35.48 2.29
117 118 0.972983 ATCAGTGCGCTAGGGAGTGT 60.973 55.000 11.61 0.00 38.46 3.55
118 119 1.032794 TATCAGTGCGCTAGGGAGTG 58.967 55.000 11.61 8.94 38.66 3.51
119 120 1.615883 CATATCAGTGCGCTAGGGAGT 59.384 52.381 11.61 0.00 0.00 3.85
121 122 1.341209 CACATATCAGTGCGCTAGGGA 59.659 52.381 11.61 1.03 32.04 4.20
122 123 1.606480 CCACATATCAGTGCGCTAGGG 60.606 57.143 9.73 1.65 38.18 3.53
123 124 1.341209 TCCACATATCAGTGCGCTAGG 59.659 52.381 9.73 0.00 38.18 3.02
125 126 1.068588 GGTCCACATATCAGTGCGCTA 59.931 52.381 9.73 0.00 38.18 4.26
126 127 0.179073 GGTCCACATATCAGTGCGCT 60.179 55.000 9.73 0.00 38.18 5.92
127 128 0.461870 TGGTCCACATATCAGTGCGC 60.462 55.000 0.00 0.00 38.18 6.09
129 130 1.605710 GCATGGTCCACATATCAGTGC 59.394 52.381 0.00 0.00 37.84 4.40
131 132 3.497405 GGATGCATGGTCCACATATCAGT 60.497 47.826 2.46 0.00 37.84 3.41
133 134 2.550639 CGGATGCATGGTCCACATATCA 60.551 50.000 2.46 0.00 37.84 2.15
135 136 1.421268 ACGGATGCATGGTCCACATAT 59.579 47.619 2.46 0.00 37.84 1.78
136 137 0.836606 ACGGATGCATGGTCCACATA 59.163 50.000 2.46 0.00 37.84 2.29
141 142 1.151777 CGTGTACGGATGCATGGTCC 61.152 60.000 2.46 0.00 35.37 4.46
143 144 4.513519 CGTGTACGGATGCATGGT 57.486 55.556 2.46 4.37 35.37 3.55
153 154 1.798725 CTGGCGTGTACCGTGTACG 60.799 63.158 8.89 0.00 40.52 3.67
154 155 1.005294 CACTGGCGTGTACCGTGTAC 61.005 60.000 7.11 7.11 39.32 2.90
155 156 1.286570 CACTGGCGTGTACCGTGTA 59.713 57.895 5.79 0.00 39.32 2.90
156 157 2.028484 CACTGGCGTGTACCGTGT 59.972 61.111 5.79 1.41 39.32 4.49
157 158 2.736995 CCACTGGCGTGTACCGTG 60.737 66.667 8.28 0.00 39.55 4.94
158 159 4.675029 GCCACTGGCGTGTACCGT 62.675 66.667 3.73 0.00 39.62 4.83
169 170 2.767445 CCATGATGTGCGGCCACTG 61.767 63.158 2.24 0.00 42.54 3.66
170 171 2.438975 CCATGATGTGCGGCCACT 60.439 61.111 2.24 0.00 42.54 4.00
171 172 2.751436 ACCATGATGTGCGGCCAC 60.751 61.111 2.24 0.00 42.40 5.01
172 173 2.751036 CACCATGATGTGCGGCCA 60.751 61.111 2.24 0.00 0.00 5.36
178 179 1.135939 CGCACTGCACCATGATGTG 59.864 57.895 1.11 0.00 39.29 3.21
179 180 1.300971 GACGCACTGCACCATGATGT 61.301 55.000 1.11 0.00 0.00 3.06
180 181 1.300266 TGACGCACTGCACCATGATG 61.300 55.000 1.11 0.00 0.00 3.07
181 182 1.003476 TGACGCACTGCACCATGAT 60.003 52.632 1.11 0.00 0.00 2.45
182 183 1.668793 CTGACGCACTGCACCATGA 60.669 57.895 1.11 0.00 0.00 3.07
183 184 2.683859 CCTGACGCACTGCACCATG 61.684 63.158 1.11 0.00 0.00 3.66
184 185 2.359107 CCTGACGCACTGCACCAT 60.359 61.111 1.11 0.00 0.00 3.55
185 186 4.624364 CCCTGACGCACTGCACCA 62.624 66.667 1.11 0.00 0.00 4.17
187 188 3.825160 TTCCCCTGACGCACTGCAC 62.825 63.158 1.11 0.00 0.00 4.57
188 189 3.555324 TTCCCCTGACGCACTGCA 61.555 61.111 1.11 0.00 0.00 4.41
189 190 3.050275 GTTCCCCTGACGCACTGC 61.050 66.667 0.00 0.00 0.00 4.40
192 193 2.112297 TTGGTTCCCCTGACGCAC 59.888 61.111 0.00 0.00 0.00 5.34
193 194 2.112297 GTTGGTTCCCCTGACGCA 59.888 61.111 0.00 0.00 0.00 5.24
194 195 1.671379 GAGTTGGTTCCCCTGACGC 60.671 63.158 0.00 0.00 0.00 5.19
195 196 0.320771 CAGAGTTGGTTCCCCTGACG 60.321 60.000 0.00 0.00 0.00 4.35
196 197 0.765510 ACAGAGTTGGTTCCCCTGAC 59.234 55.000 0.00 0.00 0.00 3.51
197 198 1.420138 GAACAGAGTTGGTTCCCCTGA 59.580 52.381 0.00 0.00 38.92 3.86
201 202 3.486383 TGAATGAACAGAGTTGGTTCCC 58.514 45.455 0.00 0.00 43.05 3.97
202 203 5.464168 CAATGAATGAACAGAGTTGGTTCC 58.536 41.667 0.00 0.00 43.05 3.62
203 204 4.919754 GCAATGAATGAACAGAGTTGGTTC 59.080 41.667 0.00 0.00 43.78 3.62
205 206 3.256631 GGCAATGAATGAACAGAGTTGGT 59.743 43.478 0.00 0.00 0.00 3.67
206 207 3.508793 AGGCAATGAATGAACAGAGTTGG 59.491 43.478 0.00 0.00 0.00 3.77
209 210 3.760684 GGAAGGCAATGAATGAACAGAGT 59.239 43.478 0.00 0.00 0.00 3.24
210 211 4.015084 AGGAAGGCAATGAATGAACAGAG 58.985 43.478 0.00 0.00 0.00 3.35
211 212 4.038271 AGGAAGGCAATGAATGAACAGA 57.962 40.909 0.00 0.00 0.00 3.41
213 214 6.009589 TCTAAAGGAAGGCAATGAATGAACA 58.990 36.000 0.00 0.00 0.00 3.18
214 215 6.515272 TCTAAAGGAAGGCAATGAATGAAC 57.485 37.500 0.00 0.00 0.00 3.18
215 216 5.126061 GCTCTAAAGGAAGGCAATGAATGAA 59.874 40.000 0.00 0.00 0.00 2.57
216 217 4.641989 GCTCTAAAGGAAGGCAATGAATGA 59.358 41.667 0.00 0.00 0.00 2.57
218 219 4.603131 TGCTCTAAAGGAAGGCAATGAAT 58.397 39.130 0.00 0.00 0.00 2.57
219 220 4.032960 TGCTCTAAAGGAAGGCAATGAA 57.967 40.909 0.00 0.00 0.00 2.57
220 221 3.719268 TGCTCTAAAGGAAGGCAATGA 57.281 42.857 0.00 0.00 0.00 2.57
222 223 4.240881 TCATGCTCTAAAGGAAGGCAAT 57.759 40.909 0.00 0.00 36.49 3.56
223 224 3.719268 TCATGCTCTAAAGGAAGGCAA 57.281 42.857 0.00 0.00 36.49 4.52
224 225 3.054139 ACATCATGCTCTAAAGGAAGGCA 60.054 43.478 0.00 0.00 37.32 4.75
225 226 3.549794 ACATCATGCTCTAAAGGAAGGC 58.450 45.455 0.00 0.00 0.00 4.35
226 227 7.284034 ACATTTACATCATGCTCTAAAGGAAGG 59.716 37.037 0.00 0.00 0.00 3.46
227 228 8.218338 ACATTTACATCATGCTCTAAAGGAAG 57.782 34.615 0.00 0.00 0.00 3.46
228 229 8.049117 AGACATTTACATCATGCTCTAAAGGAA 58.951 33.333 0.00 0.00 0.00 3.36
231 232 7.130917 GCAGACATTTACATCATGCTCTAAAG 58.869 38.462 0.00 0.00 0.00 1.85
234 235 5.673514 TGCAGACATTTACATCATGCTCTA 58.326 37.500 0.00 0.00 33.47 2.43
235 236 4.520179 TGCAGACATTTACATCATGCTCT 58.480 39.130 0.00 0.00 33.47 4.09
236 237 4.888038 TGCAGACATTTACATCATGCTC 57.112 40.909 0.00 0.00 33.47 4.26
237 238 4.643334 ACATGCAGACATTTACATCATGCT 59.357 37.500 0.00 0.00 32.87 3.79
238 239 4.928601 ACATGCAGACATTTACATCATGC 58.071 39.130 0.00 0.00 32.87 4.06
239 240 7.030768 TCAAACATGCAGACATTTACATCATG 58.969 34.615 0.00 0.00 32.87 3.07
241 242 6.430616 TCTCAAACATGCAGACATTTACATCA 59.569 34.615 0.00 0.00 32.87 3.07
242 243 6.845302 TCTCAAACATGCAGACATTTACATC 58.155 36.000 0.00 0.00 32.87 3.06
243 244 6.822667 TCTCAAACATGCAGACATTTACAT 57.177 33.333 0.00 0.00 32.87 2.29
244 245 6.430616 TCATCTCAAACATGCAGACATTTACA 59.569 34.615 0.00 0.00 32.87 2.41
246 247 6.656270 ACTCATCTCAAACATGCAGACATTTA 59.344 34.615 0.00 0.00 32.87 1.40
251 252 4.252073 AGACTCATCTCAAACATGCAGAC 58.748 43.478 0.00 0.00 0.00 3.51
263 264 5.127845 TTGGGACACTATTGAGACTCATCTC 59.872 44.000 5.87 0.05 45.81 2.75
265 266 5.344743 TTGGGACACTATTGAGACTCATC 57.655 43.478 5.87 0.00 39.29 2.92
267 268 5.560722 TTTTGGGACACTATTGAGACTCA 57.439 39.130 0.00 0.00 39.29 3.41
269 270 7.607991 CACTTATTTTGGGACACTATTGAGACT 59.392 37.037 0.00 0.00 39.29 3.24
272 273 7.413000 CGACACTTATTTTGGGACACTATTGAG 60.413 40.741 0.00 0.00 39.29 3.02
273 274 6.370442 CGACACTTATTTTGGGACACTATTGA 59.630 38.462 0.00 0.00 39.29 2.57
274 275 6.542852 CGACACTTATTTTGGGACACTATTG 58.457 40.000 0.00 0.00 39.29 1.90
275 276 5.123344 GCGACACTTATTTTGGGACACTATT 59.877 40.000 0.00 0.00 39.29 1.73
276 277 4.634443 GCGACACTTATTTTGGGACACTAT 59.366 41.667 0.00 0.00 39.29 2.12
279 280 2.812011 AGCGACACTTATTTTGGGACAC 59.188 45.455 0.00 0.00 39.29 3.67
280 281 2.811431 CAGCGACACTTATTTTGGGACA 59.189 45.455 0.00 0.00 0.00 4.02
282 283 3.410631 TCAGCGACACTTATTTTGGGA 57.589 42.857 0.00 0.00 0.00 4.37
283 284 4.701956 AATCAGCGACACTTATTTTGGG 57.298 40.909 0.00 0.00 0.00 4.12
284 285 6.842163 ACTAAATCAGCGACACTTATTTTGG 58.158 36.000 0.00 0.00 34.69 3.28
287 288 9.821662 GTTTTACTAAATCAGCGACACTTATTT 57.178 29.630 0.00 0.00 36.43 1.40
289 290 8.773404 AGTTTTACTAAATCAGCGACACTTAT 57.227 30.769 0.00 0.00 0.00 1.73
290 291 8.597662 AAGTTTTACTAAATCAGCGACACTTA 57.402 30.769 0.00 0.00 0.00 2.24
292 293 6.704493 TGAAGTTTTACTAAATCAGCGACACT 59.296 34.615 0.00 0.00 0.00 3.55
293 294 6.884187 TGAAGTTTTACTAAATCAGCGACAC 58.116 36.000 0.00 0.00 0.00 3.67
295 296 7.118422 ACTGAAGTTTTACTAAATCAGCGAC 57.882 36.000 9.26 0.00 35.33 5.19
297 298 6.797033 CCAACTGAAGTTTTACTAAATCAGCG 59.203 38.462 9.26 3.75 35.33 5.18
298 299 7.040686 TCCCAACTGAAGTTTTACTAAATCAGC 60.041 37.037 9.26 0.00 35.33 4.26
299 300 8.391075 TCCCAACTGAAGTTTTACTAAATCAG 57.609 34.615 8.28 8.28 36.84 2.90
300 301 8.934023 ATCCCAACTGAAGTTTTACTAAATCA 57.066 30.769 0.00 0.00 35.83 2.57
312 313 9.981460 ATTTTCTAAGAATATCCCAACTGAAGT 57.019 29.630 0.00 0.00 0.00 3.01
314 315 9.753674 ACATTTTCTAAGAATATCCCAACTGAA 57.246 29.630 0.00 0.00 0.00 3.02
343 344 9.326413 CGGAAAATAGTCCAGTAATGAAACTAT 57.674 33.333 10.51 10.51 37.56 2.12
344 345 8.533657 TCGGAAAATAGTCCAGTAATGAAACTA 58.466 33.333 7.52 7.52 37.56 2.24
345 346 7.391620 TCGGAAAATAGTCCAGTAATGAAACT 58.608 34.615 0.00 0.00 37.56 2.66
346 347 7.605410 TCGGAAAATAGTCCAGTAATGAAAC 57.395 36.000 0.00 0.00 37.56 2.78
347 348 8.801882 ATTCGGAAAATAGTCCAGTAATGAAA 57.198 30.769 0.00 0.00 37.56 2.69
348 349 8.673711 CAATTCGGAAAATAGTCCAGTAATGAA 58.326 33.333 0.00 0.00 37.56 2.57
349 350 7.827236 ACAATTCGGAAAATAGTCCAGTAATGA 59.173 33.333 0.00 0.00 37.56 2.57
352 353 6.311935 CGACAATTCGGAAAATAGTCCAGTAA 59.688 38.462 0.00 0.00 41.89 2.24
353 354 5.808540 CGACAATTCGGAAAATAGTCCAGTA 59.191 40.000 0.00 0.00 41.89 2.74
355 356 4.868171 TCGACAATTCGGAAAATAGTCCAG 59.132 41.667 0.00 0.00 45.90 3.86
356 357 4.823157 TCGACAATTCGGAAAATAGTCCA 58.177 39.130 0.00 0.00 45.90 4.02
357 358 5.522460 TGATCGACAATTCGGAAAATAGTCC 59.478 40.000 0.00 0.00 45.90 3.85
358 359 6.583912 TGATCGACAATTCGGAAAATAGTC 57.416 37.500 0.00 0.45 45.90 2.59
359 360 7.553881 AATGATCGACAATTCGGAAAATAGT 57.446 32.000 0.00 0.00 45.90 2.12
360 361 8.841444 AAAATGATCGACAATTCGGAAAATAG 57.159 30.769 0.00 0.00 45.90 1.73
386 387 7.624134 GCATATTCATCACGTGTCTGAAGAAAA 60.624 37.037 27.39 18.46 33.01 2.29
387 388 6.183360 GCATATTCATCACGTGTCTGAAGAAA 60.183 38.462 27.39 20.02 33.01 2.52
388 389 5.291858 GCATATTCATCACGTGTCTGAAGAA 59.708 40.000 27.39 21.61 33.61 2.52
389 390 4.805719 GCATATTCATCACGTGTCTGAAGA 59.194 41.667 27.39 25.26 32.82 2.87
390 391 4.807834 AGCATATTCATCACGTGTCTGAAG 59.192 41.667 27.39 19.88 32.82 3.02
391 392 4.758688 AGCATATTCATCACGTGTCTGAA 58.241 39.130 26.53 26.53 33.75 3.02
392 393 4.363138 GAGCATATTCATCACGTGTCTGA 58.637 43.478 16.51 16.26 0.00 3.27
393 394 3.181178 CGAGCATATTCATCACGTGTCTG 59.819 47.826 16.51 14.21 0.00 3.51
394 395 3.375642 CGAGCATATTCATCACGTGTCT 58.624 45.455 16.51 1.11 0.00 3.41
396 397 2.159099 ACCGAGCATATTCATCACGTGT 60.159 45.455 16.51 0.00 0.00 4.49
397 398 2.473816 ACCGAGCATATTCATCACGTG 58.526 47.619 9.94 9.94 0.00 4.49
399 400 3.123050 TCAACCGAGCATATTCATCACG 58.877 45.455 0.00 0.00 0.00 4.35
400 401 4.751600 TGATCAACCGAGCATATTCATCAC 59.248 41.667 0.00 0.00 31.10 3.06
401 402 4.959723 TGATCAACCGAGCATATTCATCA 58.040 39.130 0.00 0.00 31.10 3.07
402 403 5.929697 TTGATCAACCGAGCATATTCATC 57.070 39.130 3.38 0.00 37.40 2.92
403 404 6.698008 TTTTGATCAACCGAGCATATTCAT 57.302 33.333 7.89 0.00 37.40 2.57
404 405 6.507958 TTTTTGATCAACCGAGCATATTCA 57.492 33.333 7.89 0.00 37.40 2.57
424 425 3.305199 CGAGGGAGTAGAGTCGTGTTTTT 60.305 47.826 0.00 0.00 0.00 1.94
425 426 2.228343 CGAGGGAGTAGAGTCGTGTTTT 59.772 50.000 0.00 0.00 0.00 2.43
427 428 1.451067 CGAGGGAGTAGAGTCGTGTT 58.549 55.000 0.00 0.00 0.00 3.32
429 430 1.025113 TGCGAGGGAGTAGAGTCGTG 61.025 60.000 0.00 0.00 34.87 4.35
430 431 0.107116 ATGCGAGGGAGTAGAGTCGT 60.107 55.000 0.00 0.00 34.87 4.34
431 432 1.025812 AATGCGAGGGAGTAGAGTCG 58.974 55.000 0.00 0.00 35.51 4.18
432 433 3.528597 AAAATGCGAGGGAGTAGAGTC 57.471 47.619 0.00 0.00 0.00 3.36
451 452 5.436175 TCACAGGAGATCACACAAGAAAAA 58.564 37.500 0.00 0.00 0.00 1.94
452 453 5.034852 TCACAGGAGATCACACAAGAAAA 57.965 39.130 0.00 0.00 0.00 2.29
453 454 4.687901 TCACAGGAGATCACACAAGAAA 57.312 40.909 0.00 0.00 0.00 2.52
455 456 4.897509 AATCACAGGAGATCACACAAGA 57.102 40.909 0.00 0.00 0.00 3.02
456 457 4.758674 ACAAATCACAGGAGATCACACAAG 59.241 41.667 0.00 0.00 0.00 3.16
457 458 4.717877 ACAAATCACAGGAGATCACACAA 58.282 39.130 0.00 0.00 0.00 3.33
458 459 4.356405 ACAAATCACAGGAGATCACACA 57.644 40.909 0.00 0.00 0.00 3.72
459 460 5.695851 AAACAAATCACAGGAGATCACAC 57.304 39.130 0.00 0.00 0.00 3.82
460 461 5.827267 TGAAAACAAATCACAGGAGATCACA 59.173 36.000 0.00 0.00 0.00 3.58
461 462 6.317789 TGAAAACAAATCACAGGAGATCAC 57.682 37.500 0.00 0.00 0.00 3.06
462 463 7.528996 AATGAAAACAAATCACAGGAGATCA 57.471 32.000 0.00 0.00 0.00 2.92
464 465 7.363268 GGCTAATGAAAACAAATCACAGGAGAT 60.363 37.037 0.00 0.00 0.00 2.75
466 467 6.095377 GGCTAATGAAAACAAATCACAGGAG 58.905 40.000 0.00 0.00 0.00 3.69
468 469 5.782047 TGGCTAATGAAAACAAATCACAGG 58.218 37.500 0.00 0.00 0.00 4.00
469 470 7.712264 TTTGGCTAATGAAAACAAATCACAG 57.288 32.000 0.00 0.00 0.00 3.66
475 476 6.484977 GGGTTGATTTGGCTAATGAAAACAAA 59.515 34.615 0.00 0.00 35.76 2.83
476 477 5.994668 GGGTTGATTTGGCTAATGAAAACAA 59.005 36.000 0.00 0.00 0.00 2.83
477 478 5.306678 AGGGTTGATTTGGCTAATGAAAACA 59.693 36.000 0.00 0.00 0.00 2.83
478 479 5.793817 AGGGTTGATTTGGCTAATGAAAAC 58.206 37.500 0.00 1.73 0.00 2.43
479 480 5.779771 AGAGGGTTGATTTGGCTAATGAAAA 59.220 36.000 0.00 0.00 0.00 2.29
480 481 5.332743 AGAGGGTTGATTTGGCTAATGAAA 58.667 37.500 0.00 0.00 0.00 2.69
482 483 4.228210 AGAGAGGGTTGATTTGGCTAATGA 59.772 41.667 0.00 0.00 0.00 2.57
483 484 4.530875 AGAGAGGGTTGATTTGGCTAATG 58.469 43.478 0.00 0.00 0.00 1.90
484 485 4.870021 AGAGAGGGTTGATTTGGCTAAT 57.130 40.909 0.00 0.00 0.00 1.73
485 486 4.042809 TCAAGAGAGGGTTGATTTGGCTAA 59.957 41.667 0.00 0.00 0.00 3.09
486 487 3.587061 TCAAGAGAGGGTTGATTTGGCTA 59.413 43.478 0.00 0.00 0.00 3.93
488 489 2.795329 TCAAGAGAGGGTTGATTTGGC 58.205 47.619 0.00 0.00 0.00 4.52
489 490 5.259632 AGATTCAAGAGAGGGTTGATTTGG 58.740 41.667 0.00 0.00 33.95 3.28
490 491 7.928307 TTAGATTCAAGAGAGGGTTGATTTG 57.072 36.000 0.00 0.00 33.95 2.32
491 492 7.944554 TGTTTAGATTCAAGAGAGGGTTGATTT 59.055 33.333 0.00 0.00 33.95 2.17
492 493 7.461749 TGTTTAGATTCAAGAGAGGGTTGATT 58.538 34.615 0.00 0.00 33.95 2.57
493 494 7.020827 TGTTTAGATTCAAGAGAGGGTTGAT 57.979 36.000 0.00 0.00 33.95 2.57
494 495 6.433847 TGTTTAGATTCAAGAGAGGGTTGA 57.566 37.500 0.00 0.00 31.98 3.18
496 497 5.707764 GCTTGTTTAGATTCAAGAGAGGGTT 59.292 40.000 8.74 0.00 42.22 4.11
497 498 5.221925 TGCTTGTTTAGATTCAAGAGAGGGT 60.222 40.000 8.74 0.00 42.22 4.34
498 499 5.123027 GTGCTTGTTTAGATTCAAGAGAGGG 59.877 44.000 8.74 0.00 42.22 4.30
499 500 5.123027 GGTGCTTGTTTAGATTCAAGAGAGG 59.877 44.000 8.74 0.00 42.22 3.69
500 501 5.123027 GGGTGCTTGTTTAGATTCAAGAGAG 59.877 44.000 8.74 0.00 42.22 3.20
503 504 4.761739 CAGGGTGCTTGTTTAGATTCAAGA 59.238 41.667 8.74 0.00 42.22 3.02
504 505 4.520492 ACAGGGTGCTTGTTTAGATTCAAG 59.480 41.667 0.00 0.00 42.44 3.02
505 506 4.278170 CACAGGGTGCTTGTTTAGATTCAA 59.722 41.667 0.00 0.00 0.00 2.69
506 507 3.820467 CACAGGGTGCTTGTTTAGATTCA 59.180 43.478 0.00 0.00 0.00 2.57
507 508 4.072131 TCACAGGGTGCTTGTTTAGATTC 58.928 43.478 0.00 0.00 32.98 2.52
512 513 3.957497 ACAAATCACAGGGTGCTTGTTTA 59.043 39.130 9.44 0.00 36.58 2.01
514 515 2.362077 GACAAATCACAGGGTGCTTGTT 59.638 45.455 13.91 3.70 38.46 2.83
515 516 1.956477 GACAAATCACAGGGTGCTTGT 59.044 47.619 13.09 13.09 39.84 3.16
517 518 2.664402 AGACAAATCACAGGGTGCTT 57.336 45.000 0.00 0.00 32.98 3.91
519 520 1.732259 CGTAGACAAATCACAGGGTGC 59.268 52.381 0.00 0.00 32.98 5.01
520 521 3.313012 TCGTAGACAAATCACAGGGTG 57.687 47.619 0.00 0.00 34.45 4.61
521 522 3.369471 CCATCGTAGACAAATCACAGGGT 60.369 47.826 0.00 0.00 42.51 4.34
522 523 3.198068 CCATCGTAGACAAATCACAGGG 58.802 50.000 0.00 0.00 42.51 4.45
601 1129 0.174845 AAACTCATGCGCTACGGCTA 59.825 50.000 9.73 0.00 36.09 3.93
602 1130 0.673644 AAAACTCATGCGCTACGGCT 60.674 50.000 9.73 0.00 36.09 5.52
603 1131 0.247695 GAAAACTCATGCGCTACGGC 60.248 55.000 9.73 0.00 0.00 5.68
604 1132 1.075542 TGAAAACTCATGCGCTACGG 58.924 50.000 9.73 0.00 0.00 4.02
605 1133 1.726791 AGTGAAAACTCATGCGCTACG 59.273 47.619 9.73 0.00 0.00 3.51
606 1134 2.736721 TGAGTGAAAACTCATGCGCTAC 59.263 45.455 9.73 0.00 41.34 3.58
799 1338 5.763876 AAGTGAAACCAGGTAGCTAGATT 57.236 39.130 0.00 0.00 37.80 2.40
976 1591 0.319728 CCTCTCCCTGTGTGTGTGAG 59.680 60.000 0.00 0.00 0.00 3.51
1016 1633 0.803768 CACTACCACTGCTGCTAGCG 60.804 60.000 10.77 6.22 46.26 4.26
1044 1667 2.942796 CGAGCTGGCCACTACCACA 61.943 63.158 0.00 0.00 35.33 4.17
1104 1727 1.006571 GAAGTCGAACGACAGGCCA 60.007 57.895 25.13 0.00 46.76 5.36
1185 1808 2.112898 GGCGAGTCCGATGTCCTTA 58.887 57.895 0.00 0.00 38.22 2.69
1833 4619 0.679505 CGTTGGTGAAGAGGTCCTGA 59.320 55.000 0.00 0.00 0.00 3.86
2096 4887 3.497332 ACAGCTACTAGTCCACTTGTCA 58.503 45.455 0.00 0.00 34.09 3.58
2175 5003 6.128007 GGCATTCTCCGTTCTATGAAGAAAAA 60.128 38.462 0.00 0.00 43.30 1.94
2185 5013 3.450817 TCAATGAGGCATTCTCCGTTCTA 59.549 43.478 0.00 0.00 41.76 2.10
2190 5018 4.394300 GGAATATCAATGAGGCATTCTCCG 59.606 45.833 11.96 0.00 41.76 4.63
2196 5024 7.506361 TCTCATAGGAATATCAATGAGGCAT 57.494 36.000 15.85 0.00 43.54 4.40
2342 5617 5.464168 CAATCAGGTGTTTCTTGATGTTCC 58.536 41.667 0.00 0.00 41.07 3.62
2367 5642 2.354821 ACGAAACTTGACTGGTTTGCTC 59.645 45.455 0.00 0.00 37.07 4.26
2382 5657 2.030451 ACCCTCTAGACGACAACGAAAC 60.030 50.000 0.00 0.00 42.66 2.78
2388 5663 1.835494 CTGGACCCTCTAGACGACAA 58.165 55.000 0.00 0.00 0.00 3.18
2389 5664 0.680280 GCTGGACCCTCTAGACGACA 60.680 60.000 0.00 0.00 0.00 4.35
2473 6344 1.825474 ACGATGCCTACACACTTAGCT 59.175 47.619 0.00 0.00 0.00 3.32
2478 6349 1.475403 AGCTACGATGCCTACACACT 58.525 50.000 0.00 0.00 0.00 3.55
2496 6367 2.936498 ACATCCGGCGATAAAGAACAAG 59.064 45.455 9.30 0.00 0.00 3.16
2919 6898 1.647084 GTGGCGGTGAGTGTTTGTC 59.353 57.895 0.00 0.00 0.00 3.18
3024 7386 2.434331 GCCTTGGTGGTGGTAGCA 59.566 61.111 0.00 0.00 38.35 3.49


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.