Multiple sequence alignment - TraesCS4A01G411900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G411900 chr4A 100.000 2234 0 0 1 2234 683966144 683968377 0.000000e+00 4126.0
1 TraesCS4A01G411900 chr4A 100.000 443 0 0 2593 3035 683968736 683969178 0.000000e+00 819.0
2 TraesCS4A01G411900 chr4A 100.000 70 0 0 2593 2662 49223201 49223270 2.460000e-26 130.0
3 TraesCS4A01G411900 chr4A 95.714 70 3 0 2593 2662 388032590 388032521 2.470000e-21 113.0
4 TraesCS4A01G411900 chr4A 95.714 70 1 1 2593 2662 542488025 542487958 8.890000e-21 111.0
5 TraesCS4A01G411900 chr4A 100.000 49 0 0 2186 2234 388032698 388032650 1.160000e-14 91.6
6 TraesCS4A01G411900 chr4A 100.000 49 0 0 2186 2234 542488132 542488084 1.160000e-14 91.6
7 TraesCS4A01G411900 chr4A 97.959 49 1 0 2186 2234 49222909 49222957 5.390000e-13 86.1
8 TraesCS4A01G411900 chr4D 88.745 773 63 20 1301 2063 477164659 477165417 0.000000e+00 924.0
9 TraesCS4A01G411900 chr4D 87.632 663 57 14 27 681 477161390 477162035 0.000000e+00 747.0
10 TraesCS4A01G411900 chr4D 93.598 328 20 1 809 1136 477164249 477164575 3.520000e-134 488.0
11 TraesCS4A01G411900 chr4D 85.315 143 21 0 1527 1669 497186815 497186957 6.780000e-32 148.0
12 TraesCS4A01G411900 chr4D 84.892 139 21 0 1301 1439 497186406 497186544 1.130000e-29 141.0
13 TraesCS4A01G411900 chr4D 87.500 96 4 2 675 767 477162061 477162151 1.490000e-18 104.0
14 TraesCS4A01G411900 chr4D 86.667 90 8 4 2821 2908 477166277 477166364 2.490000e-16 97.1
15 TraesCS4A01G411900 chr4D 80.952 126 20 4 1315 1438 497126181 497126304 2.490000e-16 97.1
16 TraesCS4A01G411900 chr4B 89.491 609 32 15 1489 2087 601792570 601793156 0.000000e+00 741.0
17 TraesCS4A01G411900 chr4B 89.562 479 26 9 675 1136 601791771 601792242 1.210000e-163 586.0
18 TraesCS4A01G411900 chr4B 86.555 238 21 9 1 230 601789970 601790204 5.020000e-63 252.0
19 TraesCS4A01G411900 chr4B 95.105 143 7 0 1301 1443 601792335 601792477 3.040000e-55 226.0
20 TraesCS4A01G411900 chr4B 85.430 151 22 0 1519 1669 638004325 638004475 1.130000e-34 158.0
21 TraesCS4A01G411900 chr4B 80.952 126 20 4 1315 1438 637621923 637622046 2.490000e-16 97.1
22 TraesCS4A01G411900 chr5A 100.000 70 0 0 2593 2662 350514877 350514946 2.460000e-26 130.0
23 TraesCS4A01G411900 chr5A 80.159 126 21 4 1315 1438 676887042 676887165 1.160000e-14 91.6
24 TraesCS4A01G411900 chr7A 98.571 70 1 0 2593 2662 708919855 708919924 1.140000e-24 124.0
25 TraesCS4A01G411900 chr2D 97.727 44 0 1 2593 2635 529552186 529552143 1.170000e-09 75.0
26 TraesCS4A01G411900 chr2D 100.000 35 0 0 2628 2662 529552161 529552127 7.020000e-07 65.8
27 TraesCS4A01G411900 chr7D 100.000 31 0 0 2630 2660 611583281 611583251 1.180000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G411900 chr4A 683966144 683969178 3034 False 2472.50 4126 100.00000 1 3035 2 chr4A.!!$F2 3034
1 TraesCS4A01G411900 chr4D 477161390 477166364 4974 False 472.02 924 88.82840 27 2908 5 chr4D.!!$F2 2881
2 TraesCS4A01G411900 chr4B 601789970 601793156 3186 False 451.25 741 90.17825 1 2087 4 chr4B.!!$F3 2086

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
606 806 1.337728 TGTGGCTCATGTGTAGGAACG 60.338 52.381 0.0 0.0 0.0 3.95 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2187 6112 0.038599 TGCACCCCGTGAGTCTAGTA 59.961 55.0 0.0 0.0 35.23 1.82 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
110 113 9.388506 CTATCTTTTGGAACAGATGACTTATGT 57.611 33.333 0.00 0.00 42.39 2.29
139 142 9.434275 TCTCTAGAACATTTATTGATACTCCCA 57.566 33.333 0.00 0.00 0.00 4.37
348 518 9.424319 TCTAGATCAAAGATTGTTGACTTGTAC 57.576 33.333 0.00 0.00 40.22 2.90
349 519 9.429359 CTAGATCAAAGATTGTTGACTTGTACT 57.571 33.333 0.00 0.00 40.22 2.73
556 755 7.475771 TGTCCTGTTACAAAAATTGATTTGC 57.524 32.000 3.08 0.00 42.68 3.68
569 769 8.907222 AAAATTGATTTGCTAACATTCCACTT 57.093 26.923 0.00 0.00 0.00 3.16
606 806 1.337728 TGTGGCTCATGTGTAGGAACG 60.338 52.381 0.00 0.00 0.00 3.95
626 1534 7.070821 AGGAACGGTACATGGACTAAAGATAAT 59.929 37.037 8.27 0.00 0.00 1.28
629 1537 7.659186 ACGGTACATGGACTAAAGATAATCTC 58.341 38.462 8.27 0.00 0.00 2.75
712 1883 7.339466 TGAAGGAAAAAGTGCTAGTCTTTTCTT 59.661 33.333 19.83 18.72 42.04 2.52
713 1884 7.646548 AGGAAAAAGTGCTAGTCTTTTCTTT 57.353 32.000 19.83 10.58 42.04 2.52
714 1885 8.067751 AGGAAAAAGTGCTAGTCTTTTCTTTT 57.932 30.769 19.83 12.06 42.04 2.27
715 1886 8.191446 AGGAAAAAGTGCTAGTCTTTTCTTTTC 58.809 33.333 19.83 15.43 42.04 2.29
716 1887 8.191446 GGAAAAAGTGCTAGTCTTTTCTTTTCT 58.809 33.333 19.83 9.61 42.04 2.52
756 1930 4.327680 ACAATGGTGCTAGTCTTTTCTCC 58.672 43.478 0.00 0.00 0.00 3.71
799 1987 2.884639 CACGGAAGAAAAACCCTGATGT 59.115 45.455 0.00 0.00 0.00 3.06
807 1995 2.586648 AAACCCTGATGTGTCCTTCC 57.413 50.000 0.00 0.00 0.00 3.46
848 4078 8.548877 GGAGCATTAATTGGGAGATACCTAATA 58.451 37.037 0.00 0.00 46.68 0.98
909 4139 2.032528 CTCCGCCAGCTTCCAACA 59.967 61.111 0.00 0.00 0.00 3.33
934 4164 2.714991 CGGTCTGCTGCTCTGCCTA 61.715 63.158 0.00 0.00 0.00 3.93
983 4213 1.806542 TGAAGAGCGGCATTCTTGTTC 59.193 47.619 8.97 0.00 35.14 3.18
1136 4366 0.194587 ATCCCCAGGCTAGCAGGTAT 59.805 55.000 18.24 10.24 0.00 2.73
1138 4368 0.977395 CCCCAGGCTAGCAGGTATAC 59.023 60.000 18.24 0.00 0.00 1.47
1139 4369 1.483307 CCCCAGGCTAGCAGGTATACT 60.483 57.143 18.24 0.00 0.00 2.12
1153 4383 6.125327 CAGGTATACTGTGTAGAGAGTGTG 57.875 45.833 2.25 0.00 42.42 3.82
1154 4384 4.641094 AGGTATACTGTGTAGAGAGTGTGC 59.359 45.833 2.25 0.00 0.00 4.57
1155 4385 4.398358 GGTATACTGTGTAGAGAGTGTGCA 59.602 45.833 2.25 0.00 0.00 4.57
1156 4386 2.802787 ACTGTGTAGAGAGTGTGCAC 57.197 50.000 10.75 10.75 0.00 4.57
1157 4387 2.031870 ACTGTGTAGAGAGTGTGCACA 58.968 47.619 17.42 17.42 38.23 4.57
1158 4388 2.670479 CTGTGTAGAGAGTGTGCACAG 58.330 52.381 22.40 7.68 46.85 3.66
1159 4389 2.031870 TGTGTAGAGAGTGTGCACAGT 58.968 47.619 26.95 26.95 35.48 3.55
1160 4390 3.219281 TGTGTAGAGAGTGTGCACAGTA 58.781 45.455 26.70 8.99 35.48 2.74
1161 4391 3.634910 TGTGTAGAGAGTGTGCACAGTAA 59.365 43.478 26.70 10.34 35.48 2.24
1162 4392 3.982058 GTGTAGAGAGTGTGCACAGTAAC 59.018 47.826 26.70 21.27 0.00 2.50
1163 4393 3.889538 TGTAGAGAGTGTGCACAGTAACT 59.110 43.478 26.70 26.02 0.00 2.24
1164 4394 3.651803 AGAGAGTGTGCACAGTAACTC 57.348 47.619 26.70 25.89 39.47 3.01
1165 4395 2.030717 AGAGAGTGTGCACAGTAACTCG 60.031 50.000 26.70 0.00 43.06 4.18
1170 4400 0.937699 GTGCACAGTAACTCGCGTCA 60.938 55.000 13.17 0.00 0.00 4.35
1174 4404 1.081641 CAGTAACTCGCGTCACGGT 60.082 57.895 5.77 0.00 43.89 4.83
1182 4412 1.512522 CGCGTCACGGTCGATTGTA 60.513 57.895 0.00 0.00 38.44 2.41
1225 4466 1.232119 TCATGCTCTGTGTGTGCAAG 58.768 50.000 0.00 0.00 46.30 4.01
1227 4468 1.069432 CATGCTCTGTGTGTGCAAGTC 60.069 52.381 0.00 0.00 46.30 3.01
1229 4470 1.835483 GCTCTGTGTGTGCAAGTCCG 61.835 60.000 0.00 0.00 35.45 4.79
1230 4471 0.249447 CTCTGTGTGTGCAAGTCCGA 60.249 55.000 0.00 0.00 0.00 4.55
1231 4472 0.176910 TCTGTGTGTGCAAGTCCGAA 59.823 50.000 0.00 0.00 0.00 4.30
1232 4473 1.202639 TCTGTGTGTGCAAGTCCGAAT 60.203 47.619 0.00 0.00 0.00 3.34
1233 4474 1.195448 CTGTGTGTGCAAGTCCGAATC 59.805 52.381 0.00 0.00 0.00 2.52
1234 4475 0.163788 GTGTGTGCAAGTCCGAATCG 59.836 55.000 0.00 0.00 0.00 3.34
1235 4476 1.132640 GTGTGCAAGTCCGAATCGC 59.867 57.895 0.00 0.00 0.00 4.58
1236 4477 1.005037 TGTGCAAGTCCGAATCGCT 60.005 52.632 0.00 0.00 0.00 4.93
1237 4478 0.245266 TGTGCAAGTCCGAATCGCTA 59.755 50.000 0.00 0.00 0.00 4.26
1238 4479 1.134818 TGTGCAAGTCCGAATCGCTAT 60.135 47.619 0.00 0.00 0.00 2.97
1239 4480 1.258982 GTGCAAGTCCGAATCGCTATG 59.741 52.381 0.00 0.00 0.00 2.23
1240 4481 0.233332 GCAAGTCCGAATCGCTATGC 59.767 55.000 0.00 1.17 0.00 3.14
1241 4482 1.858091 CAAGTCCGAATCGCTATGCT 58.142 50.000 0.00 0.00 0.00 3.79
1242 4483 2.862530 GCAAGTCCGAATCGCTATGCTA 60.863 50.000 0.00 0.00 0.00 3.49
1243 4484 2.983136 CAAGTCCGAATCGCTATGCTAG 59.017 50.000 0.00 0.00 0.00 3.42
1258 4499 6.885952 CTATGCTAGCTACTCCTAGTTTGA 57.114 41.667 17.23 0.00 37.66 2.69
1259 4500 7.461182 CTATGCTAGCTACTCCTAGTTTGAT 57.539 40.000 17.23 0.00 37.66 2.57
1260 4501 5.521906 TGCTAGCTACTCCTAGTTTGATG 57.478 43.478 17.23 0.00 37.66 3.07
1261 4502 4.342378 TGCTAGCTACTCCTAGTTTGATGG 59.658 45.833 17.23 0.00 37.66 3.51
1262 4503 4.585162 GCTAGCTACTCCTAGTTTGATGGA 59.415 45.833 7.70 0.00 37.66 3.41
1263 4504 5.069251 GCTAGCTACTCCTAGTTTGATGGAA 59.931 44.000 7.70 0.00 37.66 3.53
1264 4505 6.239458 GCTAGCTACTCCTAGTTTGATGGAAT 60.239 42.308 7.70 0.00 37.66 3.01
1265 4506 6.567602 AGCTACTCCTAGTTTGATGGAATT 57.432 37.500 0.00 0.00 0.00 2.17
1266 4507 7.676683 AGCTACTCCTAGTTTGATGGAATTA 57.323 36.000 0.00 0.00 0.00 1.40
1267 4508 8.268878 AGCTACTCCTAGTTTGATGGAATTAT 57.731 34.615 0.00 0.00 0.00 1.28
1268 4509 8.371699 AGCTACTCCTAGTTTGATGGAATTATC 58.628 37.037 0.00 0.00 0.00 1.75
1269 4510 7.604545 GCTACTCCTAGTTTGATGGAATTATCC 59.395 40.741 0.00 0.00 46.76 2.59
1270 4511 7.698163 ACTCCTAGTTTGATGGAATTATCCT 57.302 36.000 0.00 0.00 46.70 3.24
1271 4512 8.107196 ACTCCTAGTTTGATGGAATTATCCTT 57.893 34.615 0.00 0.00 46.70 3.36
1272 4513 8.560903 ACTCCTAGTTTGATGGAATTATCCTTT 58.439 33.333 0.00 0.00 46.70 3.11
1273 4514 8.752005 TCCTAGTTTGATGGAATTATCCTTTG 57.248 34.615 0.00 0.00 46.70 2.77
1274 4515 8.556589 TCCTAGTTTGATGGAATTATCCTTTGA 58.443 33.333 0.00 0.00 46.70 2.69
1275 4516 8.844244 CCTAGTTTGATGGAATTATCCTTTGAG 58.156 37.037 0.00 0.00 46.70 3.02
1276 4517 9.401058 CTAGTTTGATGGAATTATCCTTTGAGT 57.599 33.333 0.00 0.00 46.70 3.41
1278 4519 9.753674 AGTTTGATGGAATTATCCTTTGAGTAA 57.246 29.630 0.00 0.00 46.70 2.24
1282 4523 9.699410 TGATGGAATTATCCTTTGAGTAATTGT 57.301 29.630 0.00 0.00 46.70 2.71
1283 4524 9.956720 GATGGAATTATCCTTTGAGTAATTGTG 57.043 33.333 0.00 0.00 46.70 3.33
1284 4525 8.877864 TGGAATTATCCTTTGAGTAATTGTGT 57.122 30.769 0.00 0.00 46.70 3.72
1285 4526 9.308000 TGGAATTATCCTTTGAGTAATTGTGTT 57.692 29.630 0.00 0.00 46.70 3.32
1286 4527 9.573133 GGAATTATCCTTTGAGTAATTGTGTTG 57.427 33.333 0.00 0.00 42.93 3.33
1291 4532 7.447374 TCCTTTGAGTAATTGTGTTGTATGG 57.553 36.000 0.00 0.00 0.00 2.74
1292 4533 7.001674 TCCTTTGAGTAATTGTGTTGTATGGT 58.998 34.615 0.00 0.00 0.00 3.55
1293 4534 7.504238 TCCTTTGAGTAATTGTGTTGTATGGTT 59.496 33.333 0.00 0.00 0.00 3.67
1294 4535 7.594758 CCTTTGAGTAATTGTGTTGTATGGTTG 59.405 37.037 0.00 0.00 0.00 3.77
1295 4536 6.007936 TGAGTAATTGTGTTGTATGGTTGC 57.992 37.500 0.00 0.00 0.00 4.17
1296 4537 5.532779 TGAGTAATTGTGTTGTATGGTTGCA 59.467 36.000 0.00 0.00 0.00 4.08
1297 4538 6.039829 TGAGTAATTGTGTTGTATGGTTGCAA 59.960 34.615 0.00 0.00 0.00 4.08
1298 4539 6.991938 AGTAATTGTGTTGTATGGTTGCAAT 58.008 32.000 0.59 0.00 29.89 3.56
1299 4540 7.441017 AGTAATTGTGTTGTATGGTTGCAATT 58.559 30.769 0.59 0.00 38.25 2.32
1321 4562 4.883354 GGCATTGAGAGGGGCGGG 62.883 72.222 0.00 0.00 0.00 6.13
1417 4658 5.221884 GGAAGATCTCATCATCCAACTCCAT 60.222 44.000 5.64 0.00 44.45 3.41
1443 4684 5.454613 CCATCATAGGCAACAGGTACATACA 60.455 44.000 0.00 0.00 41.41 2.29
1445 4686 6.056090 TCATAGGCAACAGGTACATACAAA 57.944 37.500 0.00 0.00 41.41 2.83
1446 4687 5.878116 TCATAGGCAACAGGTACATACAAAC 59.122 40.000 0.00 0.00 41.41 2.93
1447 4688 4.367039 AGGCAACAGGTACATACAAACT 57.633 40.909 0.00 0.00 41.41 2.66
1449 4690 4.069304 GGCAACAGGTACATACAAACTCA 58.931 43.478 0.00 0.00 0.00 3.41
1450 4691 4.700213 GGCAACAGGTACATACAAACTCAT 59.300 41.667 0.00 0.00 0.00 2.90
1452 4693 5.163754 GCAACAGGTACATACAAACTCATCC 60.164 44.000 0.00 0.00 0.00 3.51
1453 4694 4.755411 ACAGGTACATACAAACTCATCCG 58.245 43.478 0.00 0.00 0.00 4.18
1454 4695 4.464951 ACAGGTACATACAAACTCATCCGA 59.535 41.667 0.00 0.00 0.00 4.55
1458 4699 6.379133 AGGTACATACAAACTCATCCGACTTA 59.621 38.462 0.00 0.00 0.00 2.24
1459 4700 6.696148 GGTACATACAAACTCATCCGACTTAG 59.304 42.308 0.00 0.00 0.00 2.18
1460 4701 5.109903 ACATACAAACTCATCCGACTTAGC 58.890 41.667 0.00 0.00 0.00 3.09
1461 4702 3.678056 ACAAACTCATCCGACTTAGCA 57.322 42.857 0.00 0.00 0.00 3.49
1462 4703 4.002906 ACAAACTCATCCGACTTAGCAA 57.997 40.909 0.00 0.00 0.00 3.91
1463 4704 3.997021 ACAAACTCATCCGACTTAGCAAG 59.003 43.478 0.00 0.00 0.00 4.01
1465 4706 1.134670 ACTCATCCGACTTAGCAAGGC 60.135 52.381 0.00 0.00 0.00 4.35
1472 4713 2.024176 GACTTAGCAAGGCGGATTGA 57.976 50.000 0.00 0.00 31.55 2.57
1473 4714 2.565841 GACTTAGCAAGGCGGATTGAT 58.434 47.619 0.00 0.00 32.67 2.57
1474 4715 2.945668 GACTTAGCAAGGCGGATTGATT 59.054 45.455 0.00 0.00 30.19 2.57
1476 4717 2.708216 TAGCAAGGCGGATTGATTGA 57.292 45.000 0.00 0.00 30.19 2.57
1477 4718 2.062971 AGCAAGGCGGATTGATTGAT 57.937 45.000 0.00 0.00 31.55 2.57
1478 4719 1.952296 AGCAAGGCGGATTGATTGATC 59.048 47.619 0.00 0.00 31.55 2.92
1479 4720 1.334419 GCAAGGCGGATTGATTGATCG 60.334 52.381 0.00 0.00 31.55 3.69
1480 4721 2.212652 CAAGGCGGATTGATTGATCGA 58.787 47.619 0.00 0.00 31.55 3.59
1482 4723 0.508641 GGCGGATTGATTGATCGACG 59.491 55.000 0.00 0.00 0.00 5.12
1483 4724 1.487482 GCGGATTGATTGATCGACGA 58.513 50.000 0.00 0.00 0.00 4.20
1486 4727 2.287608 CGGATTGATTGATCGACGAGGA 60.288 50.000 3.01 0.00 0.00 3.71
1487 4728 3.312828 GGATTGATTGATCGACGAGGAG 58.687 50.000 3.01 0.00 0.00 3.69
1501 4789 3.139077 ACGAGGAGGTTGTTCATTTCAC 58.861 45.455 0.00 0.00 0.00 3.18
1508 4796 5.200368 AGGTTGTTCATTTCACCATTGAC 57.800 39.130 0.00 0.00 0.00 3.18
1518 4806 5.371115 TTTCACCATTGACGAGGAAATTC 57.629 39.130 0.00 0.00 0.00 2.17
1519 4807 4.014569 TCACCATTGACGAGGAAATTCA 57.985 40.909 0.00 0.00 0.00 2.57
1521 4809 4.395854 TCACCATTGACGAGGAAATTCATG 59.604 41.667 0.00 0.00 0.00 3.07
1522 4810 3.129287 ACCATTGACGAGGAAATTCATGC 59.871 43.478 0.00 0.00 0.00 4.06
1523 4811 3.129113 CCATTGACGAGGAAATTCATGCA 59.871 43.478 0.00 0.00 0.00 3.96
1524 4812 4.202080 CCATTGACGAGGAAATTCATGCAT 60.202 41.667 0.00 0.00 0.00 3.96
1525 4813 5.345702 CATTGACGAGGAAATTCATGCATT 58.654 37.500 0.00 0.00 0.00 3.56
1526 4814 4.359971 TGACGAGGAAATTCATGCATTG 57.640 40.909 0.00 0.00 0.00 2.82
1527 4815 3.129113 TGACGAGGAAATTCATGCATTGG 59.871 43.478 0.00 0.00 0.00 3.16
1715 5003 0.920763 ATCCTGCCATCCCACCTTGA 60.921 55.000 0.00 0.00 0.00 3.02
1729 5017 3.646204 ACCTTGAGGCAGGTAGCAACG 62.646 57.143 0.00 0.00 46.14 4.10
1750 5038 4.119363 GCAGCCATGGAGCCCTGA 62.119 66.667 18.40 0.00 0.00 3.86
1829 5117 0.794473 GTTGTACTTGTACAGCCGGC 59.206 55.000 21.89 21.89 0.00 6.13
1903 5191 2.617274 GGCGAGCAGTGGAACAACC 61.617 63.158 0.00 0.00 44.16 3.77
1904 5192 1.598130 GCGAGCAGTGGAACAACCT 60.598 57.895 0.00 0.00 44.16 3.50
1907 5195 0.249911 GAGCAGTGGAACAACCTCGT 60.250 55.000 0.00 0.00 44.16 4.18
1941 5232 1.740585 CTGTTCGATCTGACGGAGAGT 59.259 52.381 0.00 0.00 32.80 3.24
1944 5235 1.584175 TCGATCTGACGGAGAGTAGC 58.416 55.000 0.00 0.00 32.80 3.58
1990 5282 4.641645 CCAACCACGCCTGCTCCA 62.642 66.667 0.00 0.00 0.00 3.86
2035 5328 1.214589 GCTCCGCGAGTACCTTGAA 59.785 57.895 8.23 0.00 31.39 2.69
2065 5358 5.687285 CGGTTTCGTATTGGGTGTAGTATAC 59.313 44.000 0.00 0.00 43.42 1.47
2067 5360 7.267857 GGTTTCGTATTGGGTGTAGTATACTT 58.732 38.462 11.40 0.00 43.54 2.24
2068 5361 8.413229 GGTTTCGTATTGGGTGTAGTATACTTA 58.587 37.037 11.40 0.00 43.54 2.24
2069 5362 9.237846 GTTTCGTATTGGGTGTAGTATACTTAC 57.762 37.037 11.40 10.59 43.54 2.34
2070 5363 8.752005 TTCGTATTGGGTGTAGTATACTTACT 57.248 34.615 11.40 0.00 43.54 2.24
2071 5364 8.752005 TCGTATTGGGTGTAGTATACTTACTT 57.248 34.615 11.40 0.00 43.54 2.24
2072 5365 9.845740 TCGTATTGGGTGTAGTATACTTACTTA 57.154 33.333 11.40 2.55 43.54 2.24
2093 5919 0.596082 ATCGGTTGGTGCTTTTTCGG 59.404 50.000 0.00 0.00 0.00 4.30
2094 5920 1.007849 CGGTTGGTGCTTTTTCGGG 60.008 57.895 0.00 0.00 0.00 5.14
2095 5921 1.365999 GGTTGGTGCTTTTTCGGGG 59.634 57.895 0.00 0.00 0.00 5.73
2096 5922 1.365999 GTTGGTGCTTTTTCGGGGG 59.634 57.895 0.00 0.00 0.00 5.40
2099 6024 0.397254 TGGTGCTTTTTCGGGGGAAA 60.397 50.000 0.00 0.00 0.00 3.13
2125 6050 1.165907 CGGCTGGTGCTTGAACTGAA 61.166 55.000 0.00 0.00 39.59 3.02
2126 6051 0.312102 GGCTGGTGCTTGAACTGAAC 59.688 55.000 0.00 0.00 39.59 3.18
2127 6052 1.312815 GCTGGTGCTTGAACTGAACT 58.687 50.000 0.00 0.00 36.03 3.01
2128 6053 1.002033 GCTGGTGCTTGAACTGAACTG 60.002 52.381 0.00 0.00 36.03 3.16
2129 6054 2.564771 CTGGTGCTTGAACTGAACTGA 58.435 47.619 0.00 0.00 0.00 3.41
2130 6055 2.288666 TGGTGCTTGAACTGAACTGAC 58.711 47.619 0.00 0.00 0.00 3.51
2131 6056 2.092968 TGGTGCTTGAACTGAACTGACT 60.093 45.455 0.00 0.00 0.00 3.41
2133 6058 4.127171 GGTGCTTGAACTGAACTGACTAA 58.873 43.478 0.00 0.00 0.00 2.24
2134 6059 4.574828 GGTGCTTGAACTGAACTGACTAAA 59.425 41.667 0.00 0.00 0.00 1.85
2135 6060 5.065988 GGTGCTTGAACTGAACTGACTAAAA 59.934 40.000 0.00 0.00 0.00 1.52
2136 6061 5.965918 GTGCTTGAACTGAACTGACTAAAAC 59.034 40.000 0.00 0.00 0.00 2.43
2137 6062 5.645929 TGCTTGAACTGAACTGACTAAAACA 59.354 36.000 0.00 0.00 0.00 2.83
2140 6065 7.166473 GCTTGAACTGAACTGACTAAAACAATG 59.834 37.037 0.00 0.00 0.00 2.82
2141 6066 7.624360 TGAACTGAACTGACTAAAACAATGT 57.376 32.000 0.00 0.00 0.00 2.71
2142 6067 7.693952 TGAACTGAACTGACTAAAACAATGTC 58.306 34.615 0.00 0.00 0.00 3.06
2143 6068 6.287107 ACTGAACTGACTAAAACAATGTCG 57.713 37.500 0.00 0.00 33.81 4.35
2144 6069 5.815740 ACTGAACTGACTAAAACAATGTCGT 59.184 36.000 0.00 0.00 33.81 4.34
2145 6070 6.018994 ACTGAACTGACTAAAACAATGTCGTC 60.019 38.462 0.00 0.00 33.81 4.20
2146 6071 5.813157 TGAACTGACTAAAACAATGTCGTCA 59.187 36.000 7.27 7.27 33.81 4.35
2147 6072 6.314152 TGAACTGACTAAAACAATGTCGTCAA 59.686 34.615 8.36 0.00 33.81 3.18
2148 6073 6.044512 ACTGACTAAAACAATGTCGTCAAC 57.955 37.500 8.36 0.00 33.81 3.18
2149 6074 5.073192 TGACTAAAACAATGTCGTCAACG 57.927 39.130 0.00 0.00 41.45 4.10
2150 6075 4.025563 TGACTAAAACAATGTCGTCAACGG 60.026 41.667 2.31 0.00 40.29 4.44
2170 6095 1.060713 CGGCGAGCAATCTATTACCG 58.939 55.000 0.00 0.00 0.00 4.02
2171 6096 0.790814 GGCGAGCAATCTATTACCGC 59.209 55.000 0.00 0.00 40.33 5.68
2174 6099 0.790814 GAGCAATCTATTACCGCCGC 59.209 55.000 0.00 0.00 0.00 6.53
2193 6118 3.991621 CGTGCGCGCAATACTAGA 58.008 55.556 38.24 7.55 0.00 2.43
2194 6119 1.553654 CGTGCGCGCAATACTAGAC 59.446 57.895 38.24 19.72 0.00 2.59
2195 6120 0.866061 CGTGCGCGCAATACTAGACT 60.866 55.000 38.24 0.00 0.00 3.24
2196 6121 0.847035 GTGCGCGCAATACTAGACTC 59.153 55.000 38.24 15.75 0.00 3.36
2197 6122 0.454196 TGCGCGCAATACTAGACTCA 59.546 50.000 34.66 2.25 0.00 3.41
2198 6123 0.847035 GCGCGCAATACTAGACTCAC 59.153 55.000 29.10 0.00 0.00 3.51
2199 6124 1.113253 CGCGCAATACTAGACTCACG 58.887 55.000 8.75 0.00 0.00 4.35
2200 6125 1.478137 GCGCAATACTAGACTCACGG 58.522 55.000 0.30 0.00 0.00 4.94
2201 6126 1.864435 GCGCAATACTAGACTCACGGG 60.864 57.143 0.30 0.00 0.00 5.28
2202 6127 1.269102 CGCAATACTAGACTCACGGGG 60.269 57.143 0.00 0.00 0.00 5.73
2203 6128 1.755380 GCAATACTAGACTCACGGGGT 59.245 52.381 0.00 0.00 0.00 4.95
2204 6129 2.481449 GCAATACTAGACTCACGGGGTG 60.481 54.545 0.00 0.00 34.45 4.61
2205 6130 1.400737 ATACTAGACTCACGGGGTGC 58.599 55.000 0.00 0.00 32.98 5.01
2206 6131 0.038599 TACTAGACTCACGGGGTGCA 59.961 55.000 0.00 0.00 32.98 4.57
2207 6132 0.614979 ACTAGACTCACGGGGTGCAT 60.615 55.000 0.00 0.00 32.98 3.96
2208 6133 0.103208 CTAGACTCACGGGGTGCATC 59.897 60.000 0.00 0.00 32.98 3.91
2209 6134 1.327690 TAGACTCACGGGGTGCATCC 61.328 60.000 7.76 7.76 32.98 3.51
2216 6141 4.832608 GGGGTGCATCCGACGGAC 62.833 72.222 21.02 8.27 32.98 4.79
2217 6142 4.832608 GGGTGCATCCGACGGACC 62.833 72.222 21.02 16.28 43.66 4.46
2218 6143 3.771160 GGTGCATCCGACGGACCT 61.771 66.667 21.02 0.24 41.35 3.85
2219 6144 2.264794 GTGCATCCGACGGACCTT 59.735 61.111 21.02 0.00 32.98 3.50
2220 6145 1.375523 GTGCATCCGACGGACCTTT 60.376 57.895 21.02 0.00 32.98 3.11
2221 6146 0.108520 GTGCATCCGACGGACCTTTA 60.109 55.000 21.02 1.19 32.98 1.85
2222 6147 0.108520 TGCATCCGACGGACCTTTAC 60.109 55.000 21.02 5.75 32.98 2.01
2223 6148 1.143969 GCATCCGACGGACCTTTACG 61.144 60.000 21.02 3.08 32.98 3.18
2224 6149 0.526954 CATCCGACGGACCTTTACGG 60.527 60.000 21.02 0.00 44.09 4.02
2225 6150 1.669999 ATCCGACGGACCTTTACGGG 61.670 60.000 21.02 0.00 43.14 5.28
2226 6151 2.182537 CGACGGACCTTTACGGGG 59.817 66.667 0.00 0.00 36.97 5.73
2227 6152 2.639327 CGACGGACCTTTACGGGGT 61.639 63.158 0.00 0.00 40.13 4.95
2228 6153 1.079612 GACGGACCTTTACGGGGTG 60.080 63.158 0.00 0.00 37.17 4.61
2229 6154 2.266689 CGGACCTTTACGGGGTGG 59.733 66.667 0.00 0.00 37.17 4.61
2230 6155 2.045634 GGACCTTTACGGGGTGGC 60.046 66.667 0.00 0.00 37.17 5.01
2231 6156 2.045634 GACCTTTACGGGGTGGCC 60.046 66.667 0.00 0.00 37.17 5.36
2232 6157 2.855014 ACCTTTACGGGGTGGCCA 60.855 61.111 0.00 0.00 35.51 5.36
2233 6158 2.414658 GACCTTTACGGGGTGGCCAA 62.415 60.000 7.24 0.00 37.17 4.52
2620 6545 9.740710 ATCCTAGCCATTAATACTTAATCAACC 57.259 33.333 0.00 0.00 33.73 3.77
2621 6546 8.161425 TCCTAGCCATTAATACTTAATCAACCC 58.839 37.037 0.00 0.00 33.73 4.11
2622 6547 7.393515 CCTAGCCATTAATACTTAATCAACCCC 59.606 40.741 0.00 0.00 33.73 4.95
2623 6548 5.768164 AGCCATTAATACTTAATCAACCCCG 59.232 40.000 0.00 0.00 33.73 5.73
2624 6549 5.533528 GCCATTAATACTTAATCAACCCCGT 59.466 40.000 0.00 0.00 33.73 5.28
2625 6550 6.711645 GCCATTAATACTTAATCAACCCCGTA 59.288 38.462 0.00 0.00 33.73 4.02
2626 6551 7.229106 GCCATTAATACTTAATCAACCCCGTAA 59.771 37.037 0.00 0.00 33.73 3.18
2627 6552 9.122779 CCATTAATACTTAATCAACCCCGTAAA 57.877 33.333 0.00 0.00 33.73 2.01
2630 6555 7.395190 AATACTTAATCAACCCCGTAAAACC 57.605 36.000 0.00 0.00 0.00 3.27
2631 6556 4.081406 ACTTAATCAACCCCGTAAAACCC 58.919 43.478 0.00 0.00 0.00 4.11
2632 6557 1.927487 AATCAACCCCGTAAAACCCC 58.073 50.000 0.00 0.00 0.00 4.95
2633 6558 0.322726 ATCAACCCCGTAAAACCCCG 60.323 55.000 0.00 0.00 0.00 5.73
2634 6559 1.228215 CAACCCCGTAAAACCCCGT 60.228 57.895 0.00 0.00 0.00 5.28
2635 6560 0.036022 CAACCCCGTAAAACCCCGTA 59.964 55.000 0.00 0.00 0.00 4.02
2636 6561 0.767998 AACCCCGTAAAACCCCGTAA 59.232 50.000 0.00 0.00 0.00 3.18
2637 6562 0.767998 ACCCCGTAAAACCCCGTAAA 59.232 50.000 0.00 0.00 0.00 2.01
2638 6563 1.164411 CCCCGTAAAACCCCGTAAAC 58.836 55.000 0.00 0.00 0.00 2.01
2639 6564 1.544314 CCCCGTAAAACCCCGTAAACA 60.544 52.381 0.00 0.00 0.00 2.83
2640 6565 1.535028 CCCGTAAAACCCCGTAAACAC 59.465 52.381 0.00 0.00 0.00 3.32
2641 6566 1.535028 CCGTAAAACCCCGTAAACACC 59.465 52.381 0.00 0.00 0.00 4.16
2642 6567 1.535028 CGTAAAACCCCGTAAACACCC 59.465 52.381 0.00 0.00 0.00 4.61
2643 6568 1.885887 GTAAAACCCCGTAAACACCCC 59.114 52.381 0.00 0.00 0.00 4.95
2644 6569 0.822944 AAAACCCCGTAAACACCCCG 60.823 55.000 0.00 0.00 0.00 5.73
2645 6570 1.993701 AAACCCCGTAAACACCCCGT 61.994 55.000 0.00 0.00 0.00 5.28
2646 6571 2.358984 CCCCGTAAACACCCCGTG 60.359 66.667 0.00 0.00 39.75 4.94
2647 6572 2.742403 CCCGTAAACACCCCGTGA 59.258 61.111 0.00 0.00 36.96 4.35
2648 6573 1.375013 CCCGTAAACACCCCGTGAG 60.375 63.158 0.00 0.00 36.96 3.51
2649 6574 1.368579 CCGTAAACACCCCGTGAGT 59.631 57.895 0.00 0.00 36.96 3.41
2650 6575 0.947180 CCGTAAACACCCCGTGAGTG 60.947 60.000 0.00 0.00 41.15 3.51
2654 6579 3.057337 ACACCCCGTGAGTGTAGC 58.943 61.111 0.00 0.00 46.37 3.58
2655 6580 1.835267 ACACCCCGTGAGTGTAGCA 60.835 57.895 0.00 0.00 46.37 3.49
2656 6581 1.192146 ACACCCCGTGAGTGTAGCAT 61.192 55.000 0.00 0.00 46.37 3.79
2657 6582 0.036388 CACCCCGTGAGTGTAGCATT 60.036 55.000 0.00 0.00 35.23 3.56
2658 6583 0.036388 ACCCCGTGAGTGTAGCATTG 60.036 55.000 0.00 0.00 0.00 2.82
2659 6584 1.369091 CCCCGTGAGTGTAGCATTGC 61.369 60.000 0.00 0.00 0.00 3.56
2660 6585 0.391661 CCCGTGAGTGTAGCATTGCT 60.392 55.000 16.63 16.63 43.41 3.91
2661 6586 1.002366 CCGTGAGTGTAGCATTGCTC 58.998 55.000 15.81 7.72 40.44 4.26
2666 6591 4.054671 GTGAGTGTAGCATTGCTCTATCC 58.945 47.826 15.81 4.06 40.44 2.59
2672 6597 1.954382 AGCATTGCTCTATCCGTACGA 59.046 47.619 18.76 3.10 30.62 3.43
2673 6598 2.052157 GCATTGCTCTATCCGTACGAC 58.948 52.381 18.76 0.00 0.00 4.34
2676 6601 1.082235 GCTCTATCCGTACGACCGC 60.082 63.158 18.76 6.52 0.00 5.68
2692 6617 1.351430 CCGCACGTGCCATATATCCG 61.351 60.000 33.23 16.21 37.91 4.18
2694 6619 1.508632 GCACGTGCCATATATCCGTT 58.491 50.000 30.12 0.00 34.31 4.44
2697 6622 1.070134 ACGTGCCATATATCCGTTGCT 59.930 47.619 0.00 0.00 0.00 3.91
2698 6623 1.460743 CGTGCCATATATCCGTTGCTG 59.539 52.381 0.00 0.00 0.00 4.41
2700 6625 1.072173 TGCCATATATCCGTTGCTGCT 59.928 47.619 0.00 0.00 0.00 4.24
2717 6642 9.289303 CGTTGCTGCTTATTGTTAAGAATTAAT 57.711 29.630 2.84 0.00 43.30 1.40
2744 6669 8.738645 AACACCTGTTGAATAGGAATAATCTC 57.261 34.615 15.24 0.00 38.71 2.75
2745 6670 8.095452 ACACCTGTTGAATAGGAATAATCTCT 57.905 34.615 15.24 0.00 38.71 3.10
2746 6671 7.989741 ACACCTGTTGAATAGGAATAATCTCTG 59.010 37.037 15.24 1.83 38.71 3.35
2747 6672 7.989741 CACCTGTTGAATAGGAATAATCTCTGT 59.010 37.037 15.24 0.00 38.71 3.41
2748 6673 8.552296 ACCTGTTGAATAGGAATAATCTCTGTT 58.448 33.333 15.24 0.00 38.71 3.16
2749 6674 9.401058 CCTGTTGAATAGGAATAATCTCTGTTT 57.599 33.333 1.18 0.00 37.52 2.83
2761 6686 5.459536 AATCTCTGTTTTTCCTTCAAGGC 57.540 39.130 0.00 0.00 34.61 4.35
2763 6688 3.117512 TCTCTGTTTTTCCTTCAAGGCCT 60.118 43.478 0.00 0.00 34.61 5.19
2767 6692 3.636764 TGTTTTTCCTTCAAGGCCTCTTC 59.363 43.478 5.23 0.00 34.61 2.87
2771 6696 1.995542 TCCTTCAAGGCCTCTTCCAAT 59.004 47.619 5.23 0.00 34.61 3.16
2778 6703 1.006281 AGGCCTCTTCCAATGCATTGA 59.994 47.619 35.47 20.78 40.14 2.57
2780 6705 2.223971 GGCCTCTTCCAATGCATTGATG 60.224 50.000 35.47 24.16 40.14 3.07
2796 6721 6.446781 CATTGATGCTTAAAGATGAGGTGT 57.553 37.500 0.00 0.00 0.00 4.16
2806 6731 7.065803 GCTTAAAGATGAGGTGTTAAGTGCATA 59.934 37.037 0.00 0.00 36.41 3.14
2808 6733 7.759489 AAAGATGAGGTGTTAAGTGCATAAA 57.241 32.000 0.00 0.00 0.00 1.40
2809 6734 7.759489 AAGATGAGGTGTTAAGTGCATAAAA 57.241 32.000 0.00 0.00 0.00 1.52
2810 6735 7.383102 AGATGAGGTGTTAAGTGCATAAAAG 57.617 36.000 0.00 0.00 0.00 2.27
2811 6736 7.168219 AGATGAGGTGTTAAGTGCATAAAAGA 58.832 34.615 0.00 0.00 0.00 2.52
2812 6737 7.665559 AGATGAGGTGTTAAGTGCATAAAAGAA 59.334 33.333 0.00 0.00 0.00 2.52
2814 6739 7.592938 TGAGGTGTTAAGTGCATAAAAGAATG 58.407 34.615 0.00 0.00 0.00 2.67
2815 6740 7.230510 TGAGGTGTTAAGTGCATAAAAGAATGT 59.769 33.333 0.00 0.00 0.00 2.71
2816 6741 8.630054 AGGTGTTAAGTGCATAAAAGAATGTA 57.370 30.769 0.00 0.00 0.00 2.29
2817 6742 8.730680 AGGTGTTAAGTGCATAAAAGAATGTAG 58.269 33.333 0.00 0.00 0.00 2.74
2818 6743 7.484959 GGTGTTAAGTGCATAAAAGAATGTAGC 59.515 37.037 0.00 0.00 0.00 3.58
2820 6745 8.572185 TGTTAAGTGCATAAAAGAATGTAGCAA 58.428 29.630 0.00 0.00 31.78 3.91
2821 6746 8.850452 GTTAAGTGCATAAAAGAATGTAGCAAC 58.150 33.333 0.00 0.00 31.78 4.17
2823 6748 7.921786 AGTGCATAAAAGAATGTAGCAACTA 57.078 32.000 0.00 0.00 31.78 2.24
2824 6749 8.335532 AGTGCATAAAAGAATGTAGCAACTAA 57.664 30.769 0.00 0.00 31.78 2.24
2827 6752 9.177608 TGCATAAAAGAATGTAGCAACTAATCT 57.822 29.630 0.00 0.00 0.00 2.40
2828 6753 9.657121 GCATAAAAGAATGTAGCAACTAATCTC 57.343 33.333 0.00 0.00 0.00 2.75
2834 6759 8.659925 AGAATGTAGCAACTAATCTCTCAATG 57.340 34.615 0.00 0.00 0.00 2.82
2835 6760 6.857777 ATGTAGCAACTAATCTCTCAATGC 57.142 37.500 0.00 0.00 0.00 3.56
2836 6761 5.733676 TGTAGCAACTAATCTCTCAATGCA 58.266 37.500 0.00 0.00 34.89 3.96
2838 6763 6.825213 TGTAGCAACTAATCTCTCAATGCATT 59.175 34.615 5.99 5.99 34.89 3.56
2839 6764 6.132791 AGCAACTAATCTCTCAATGCATTG 57.867 37.500 29.75 29.75 39.10 2.82
2840 6765 5.651139 AGCAACTAATCTCTCAATGCATTGT 59.349 36.000 32.67 18.52 38.84 2.71
2841 6766 5.970023 GCAACTAATCTCTCAATGCATTGTC 59.030 40.000 32.67 3.03 38.84 3.18
2842 6767 5.980698 ACTAATCTCTCAATGCATTGTCG 57.019 39.130 32.67 25.11 38.84 4.35
2843 6768 3.687572 AATCTCTCAATGCATTGTCGC 57.312 42.857 32.67 0.00 38.84 5.19
2882 6807 9.374960 GCTAAGCTTTTCTCATATAATTGTTCG 57.625 33.333 3.20 0.00 0.00 3.95
2891 6816 4.819630 TCATATAATTGTTCGTTGAGCCCC 59.180 41.667 0.00 0.00 0.00 5.80
2893 6818 1.862602 AATTGTTCGTTGAGCCCCGC 61.863 55.000 0.00 0.00 0.00 6.13
2898 6823 4.735132 CGTTGAGCCCCGCTTCGA 62.735 66.667 0.00 0.00 39.88 3.71
2903 6828 1.591863 GAGCCCCGCTTCGATACAC 60.592 63.158 0.00 0.00 39.88 2.90
2904 6829 2.017559 GAGCCCCGCTTCGATACACT 62.018 60.000 0.00 0.00 39.88 3.55
2907 6832 1.067582 CCCGCTTCGATACACTCCC 59.932 63.158 0.00 0.00 0.00 4.30
2908 6833 1.392710 CCCGCTTCGATACACTCCCT 61.393 60.000 0.00 0.00 0.00 4.20
2909 6834 1.315690 CCGCTTCGATACACTCCCTA 58.684 55.000 0.00 0.00 0.00 3.53
2910 6835 1.001597 CCGCTTCGATACACTCCCTAC 60.002 57.143 0.00 0.00 0.00 3.18
2911 6836 1.948145 CGCTTCGATACACTCCCTACT 59.052 52.381 0.00 0.00 0.00 2.57
2912 6837 3.136763 CGCTTCGATACACTCCCTACTA 58.863 50.000 0.00 0.00 0.00 1.82
2913 6838 3.562973 CGCTTCGATACACTCCCTACTAA 59.437 47.826 0.00 0.00 0.00 2.24
2914 6839 4.036027 CGCTTCGATACACTCCCTACTAAA 59.964 45.833 0.00 0.00 0.00 1.85
2915 6840 5.278364 CGCTTCGATACACTCCCTACTAAAT 60.278 44.000 0.00 0.00 0.00 1.40
2916 6841 5.921408 GCTTCGATACACTCCCTACTAAATG 59.079 44.000 0.00 0.00 0.00 2.32
2917 6842 6.461231 GCTTCGATACACTCCCTACTAAATGT 60.461 42.308 0.00 0.00 0.00 2.71
2918 6843 7.255381 GCTTCGATACACTCCCTACTAAATGTA 60.255 40.741 0.00 0.00 0.00 2.29
2919 6844 8.701908 TTCGATACACTCCCTACTAAATGTAT 57.298 34.615 0.00 0.00 36.28 2.29
2920 6845 9.797642 TTCGATACACTCCCTACTAAATGTATA 57.202 33.333 0.00 0.00 34.30 1.47
2921 6846 9.797642 TCGATACACTCCCTACTAAATGTATAA 57.202 33.333 0.00 0.00 34.30 0.98
2926 6851 8.999895 ACACTCCCTACTAAATGTATAAATGGT 58.000 33.333 0.00 0.00 0.00 3.55
2941 6866 9.646427 TGTATAAATGGTAAAATTGACCTTTGC 57.354 29.630 0.53 0.00 37.88 3.68
2942 6867 9.869757 GTATAAATGGTAAAATTGACCTTTGCT 57.130 29.630 0.53 0.00 37.88 3.91
2946 6871 9.791801 AAATGGTAAAATTGACCTTTGCTAAAT 57.208 25.926 0.53 0.00 37.88 1.40
2947 6872 9.791801 AATGGTAAAATTGACCTTTGCTAAATT 57.208 25.926 0.53 0.00 37.88 1.82
2948 6873 8.600449 TGGTAAAATTGACCTTTGCTAAATTG 57.400 30.769 0.53 0.00 37.88 2.32
2949 6874 8.207545 TGGTAAAATTGACCTTTGCTAAATTGT 58.792 29.630 0.53 0.00 37.88 2.71
2950 6875 9.699703 GGTAAAATTGACCTTTGCTAAATTGTA 57.300 29.630 0.00 0.00 33.86 2.41
2952 6877 8.601845 AAAATTGACCTTTGCTAAATTGTACC 57.398 30.769 0.00 0.00 0.00 3.34
2953 6878 7.539034 AATTGACCTTTGCTAAATTGTACCT 57.461 32.000 0.00 0.00 0.00 3.08
2954 6879 8.644374 AATTGACCTTTGCTAAATTGTACCTA 57.356 30.769 0.00 0.00 0.00 3.08
2955 6880 8.644374 ATTGACCTTTGCTAAATTGTACCTAA 57.356 30.769 0.00 0.00 0.00 2.69
2956 6881 8.644374 TTGACCTTTGCTAAATTGTACCTAAT 57.356 30.769 0.00 0.00 0.00 1.73
2957 6882 8.644374 TGACCTTTGCTAAATTGTACCTAATT 57.356 30.769 0.00 0.00 31.87 1.40
2958 6883 9.084533 TGACCTTTGCTAAATTGTACCTAATTT 57.915 29.630 8.47 8.47 41.62 1.82
2959 6884 9.569167 GACCTTTGCTAAATTGTACCTAATTTC 57.431 33.333 7.07 0.00 39.96 2.17
2960 6885 9.084533 ACCTTTGCTAAATTGTACCTAATTTCA 57.915 29.630 7.07 0.07 39.96 2.69
2965 6890 9.386010 TGCTAAATTGTACCTAATTTCATACGT 57.614 29.630 7.07 0.00 39.96 3.57
2972 6897 9.483916 TTGTACCTAATTTCATACGTATGATGG 57.516 33.333 32.72 27.57 41.86 3.51
2973 6898 8.092068 TGTACCTAATTTCATACGTATGATGGG 58.908 37.037 32.72 29.03 41.86 4.00
2974 6899 7.074653 ACCTAATTTCATACGTATGATGGGT 57.925 36.000 32.72 29.57 41.86 4.51
2975 6900 7.159372 ACCTAATTTCATACGTATGATGGGTC 58.841 38.462 32.72 0.00 41.86 4.46
2976 6901 6.310467 CCTAATTTCATACGTATGATGGGTCG 59.690 42.308 32.72 20.49 41.86 4.79
2977 6902 2.717580 TCATACGTATGATGGGTCGC 57.282 50.000 29.79 0.00 37.76 5.19
2978 6903 1.271379 TCATACGTATGATGGGTCGCC 59.729 52.381 29.79 0.00 37.76 5.54
2979 6904 0.606604 ATACGTATGATGGGTCGCCC 59.393 55.000 7.41 7.87 45.71 6.13
2980 6905 0.468585 TACGTATGATGGGTCGCCCT 60.469 55.000 14.76 2.42 45.70 5.19
2981 6906 1.006102 CGTATGATGGGTCGCCCTC 60.006 63.158 14.76 10.45 45.70 4.30
2982 6907 1.464376 CGTATGATGGGTCGCCCTCT 61.464 60.000 14.76 3.94 45.70 3.69
2983 6908 0.759346 GTATGATGGGTCGCCCTCTT 59.241 55.000 14.76 10.36 45.70 2.85
2984 6909 0.758734 TATGATGGGTCGCCCTCTTG 59.241 55.000 14.76 0.00 45.70 3.02
2985 6910 1.987807 ATGATGGGTCGCCCTCTTGG 61.988 60.000 14.76 0.00 45.70 3.61
2986 6911 2.610859 ATGGGTCGCCCTCTTGGT 60.611 61.111 14.76 0.00 45.70 3.67
2987 6912 2.198304 GATGGGTCGCCCTCTTGGTT 62.198 60.000 14.76 0.00 45.70 3.67
2988 6913 1.789576 ATGGGTCGCCCTCTTGGTTT 61.790 55.000 14.76 0.00 45.70 3.27
2989 6914 1.128809 TGGGTCGCCCTCTTGGTTTA 61.129 55.000 14.76 0.00 45.70 2.01
2990 6915 0.675837 GGGTCGCCCTCTTGGTTTAC 60.676 60.000 7.58 0.00 41.34 2.01
2991 6916 0.035739 GGTCGCCCTCTTGGTTTACA 59.964 55.000 0.00 0.00 36.04 2.41
2992 6917 1.339727 GGTCGCCCTCTTGGTTTACAT 60.340 52.381 0.00 0.00 36.04 2.29
2993 6918 2.007608 GTCGCCCTCTTGGTTTACATC 58.992 52.381 0.00 0.00 36.04 3.06
2994 6919 1.065709 TCGCCCTCTTGGTTTACATCC 60.066 52.381 0.00 0.00 36.04 3.51
2995 6920 1.339631 CGCCCTCTTGGTTTACATCCA 60.340 52.381 0.00 0.00 36.04 3.41
2996 6921 2.092323 GCCCTCTTGGTTTACATCCAC 58.908 52.381 0.00 0.00 34.45 4.02
2997 6922 2.723273 CCCTCTTGGTTTACATCCACC 58.277 52.381 0.00 0.00 34.45 4.61
2998 6923 2.620627 CCCTCTTGGTTTACATCCACCC 60.621 54.545 0.00 0.00 34.45 4.61
2999 6924 2.356135 CTCTTGGTTTACATCCACCCG 58.644 52.381 0.00 0.00 34.45 5.28
3000 6925 0.808755 CTTGGTTTACATCCACCCGC 59.191 55.000 0.00 0.00 34.45 6.13
3001 6926 0.402504 TTGGTTTACATCCACCCGCT 59.597 50.000 0.00 0.00 34.45 5.52
3002 6927 0.322098 TGGTTTACATCCACCCGCTG 60.322 55.000 0.00 0.00 31.24 5.18
3003 6928 0.322187 GGTTTACATCCACCCGCTGT 60.322 55.000 0.00 0.00 0.00 4.40
3004 6929 1.065998 GGTTTACATCCACCCGCTGTA 60.066 52.381 0.00 0.00 0.00 2.74
3005 6930 2.616001 GGTTTACATCCACCCGCTGTAA 60.616 50.000 0.00 0.00 34.48 2.41
3006 6931 2.389962 TTACATCCACCCGCTGTAAC 57.610 50.000 0.00 0.00 32.09 2.50
3007 6932 0.538118 TACATCCACCCGCTGTAACC 59.462 55.000 0.00 0.00 0.00 2.85
3008 6933 1.298340 CATCCACCCGCTGTAACCA 59.702 57.895 0.00 0.00 0.00 3.67
3009 6934 0.322098 CATCCACCCGCTGTAACCAA 60.322 55.000 0.00 0.00 0.00 3.67
3010 6935 0.035439 ATCCACCCGCTGTAACCAAG 60.035 55.000 0.00 0.00 0.00 3.61
3011 6936 1.072505 CCACCCGCTGTAACCAAGT 59.927 57.895 0.00 0.00 0.00 3.16
3012 6937 1.234615 CCACCCGCTGTAACCAAGTG 61.235 60.000 0.00 0.00 0.00 3.16
3013 6938 1.072505 ACCCGCTGTAACCAAGTGG 59.927 57.895 0.00 0.00 42.17 4.00
3014 6939 1.674322 CCCGCTGTAACCAAGTGGG 60.674 63.158 7.62 7.62 45.45 4.61
3015 6940 1.373435 CCGCTGTAACCAAGTGGGA 59.627 57.895 1.69 0.00 41.15 4.37
3016 6941 0.953960 CCGCTGTAACCAAGTGGGAC 60.954 60.000 1.69 0.21 41.15 4.46
3017 6942 0.250124 CGCTGTAACCAAGTGGGACA 60.250 55.000 1.69 4.90 41.15 4.02
3018 6943 1.812324 CGCTGTAACCAAGTGGGACAA 60.812 52.381 1.69 0.00 44.16 3.18
3019 6944 1.607148 GCTGTAACCAAGTGGGACAAC 59.393 52.381 1.69 0.00 44.16 3.32
3020 6945 2.748465 GCTGTAACCAAGTGGGACAACT 60.748 50.000 1.69 0.00 44.16 3.16
3021 6946 2.878406 CTGTAACCAAGTGGGACAACTG 59.122 50.000 1.69 0.00 44.16 3.16
3022 6947 2.506231 TGTAACCAAGTGGGACAACTGA 59.494 45.455 1.69 0.00 44.16 3.41
3023 6948 2.052782 AACCAAGTGGGACAACTGAC 57.947 50.000 1.69 0.00 44.16 3.51
3024 6949 1.213296 ACCAAGTGGGACAACTGACT 58.787 50.000 1.69 0.00 44.16 3.41
3025 6950 1.564348 ACCAAGTGGGACAACTGACTT 59.436 47.619 1.69 0.00 44.16 3.01
3026 6951 1.949525 CCAAGTGGGACAACTGACTTG 59.050 52.381 0.00 0.00 44.16 3.16
3027 6952 2.643551 CAAGTGGGACAACTGACTTGT 58.356 47.619 0.00 0.00 46.44 3.16
3033 6958 2.690326 ACAACTGACTTGTCGTGCC 58.310 52.632 0.00 0.00 38.94 5.01
3034 6959 0.178068 ACAACTGACTTGTCGTGCCT 59.822 50.000 0.00 0.00 38.94 4.75
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 4.017126 TGTCGGACTACATGATCTTCACT 58.983 43.478 9.88 0.00 0.00 3.41
17 18 2.432146 AGTGCATGATGTCGGACTACAT 59.568 45.455 9.88 11.31 42.75 2.29
18 19 1.824852 AGTGCATGATGTCGGACTACA 59.175 47.619 9.88 9.57 31.38 2.74
57 59 1.337728 TGAGCGATGAACGGACATTGT 60.338 47.619 11.18 0.00 42.83 2.71
60 62 1.136891 TCATGAGCGATGAACGGACAT 59.863 47.619 0.00 0.00 38.19 3.06
110 113 9.973450 GAGTATCAATAAATGTTCTAGAGAGCA 57.027 33.333 0.00 0.00 35.79 4.26
322 492 9.424319 GTACAAGTCAACAATCTTTGATCTAGA 57.576 33.333 0.00 0.00 37.80 2.43
350 520 9.280456 TCCTCTTACATTCCTTCTAAACCTAAT 57.720 33.333 0.00 0.00 0.00 1.73
461 642 6.766429 AGTTGACCGGAATTAGTTAAAGTCT 58.234 36.000 9.46 0.00 32.72 3.24
474 655 7.169591 TGGATTTAATAGAAAGTTGACCGGAA 58.830 34.615 9.46 0.00 0.00 4.30
477 658 7.985476 ACATGGATTTAATAGAAAGTTGACCG 58.015 34.615 0.00 0.00 0.00 4.79
506 687 1.333619 CATGTACGGCCCAAAGCATAC 59.666 52.381 0.00 0.00 46.50 2.39
514 695 1.834896 ACATCTAACATGTACGGCCCA 59.165 47.619 0.00 0.00 0.00 5.36
569 769 5.669477 AGCCACAAAAGCACTTCAATTTTA 58.331 33.333 0.00 0.00 0.00 1.52
576 776 2.035066 ACATGAGCCACAAAAGCACTTC 59.965 45.455 0.00 0.00 0.00 3.01
582 782 3.411446 TCCTACACATGAGCCACAAAAG 58.589 45.455 0.00 0.00 0.00 2.27
606 806 9.084533 AGAGAGATTATCTTTAGTCCATGTACC 57.915 37.037 0.00 0.00 38.84 3.34
629 1537 3.374042 TCCTGTCCACCTCTCTTAGAG 57.626 52.381 2.23 2.23 41.96 2.43
681 1818 8.273780 AGACTAGCACTTTTTCCTTCATATTG 57.726 34.615 0.00 0.00 0.00 1.90
712 1883 4.356405 TGACATCTGCTTCCTTGAGAAA 57.644 40.909 0.00 0.00 32.88 2.52
713 1884 4.067896 GTTGACATCTGCTTCCTTGAGAA 58.932 43.478 0.00 0.00 0.00 2.87
714 1885 3.071457 TGTTGACATCTGCTTCCTTGAGA 59.929 43.478 0.00 0.00 0.00 3.27
715 1886 3.405831 TGTTGACATCTGCTTCCTTGAG 58.594 45.455 0.00 0.00 0.00 3.02
716 1887 3.490439 TGTTGACATCTGCTTCCTTGA 57.510 42.857 0.00 0.00 0.00 3.02
767 1941 4.555709 TTCCGTGGTGCGTGCCTT 62.556 61.111 0.00 0.00 39.32 4.35
768 1942 4.988598 CTTCCGTGGTGCGTGCCT 62.989 66.667 0.00 0.00 39.32 4.75
770 1944 2.054140 TTTTCTTCCGTGGTGCGTGC 62.054 55.000 0.00 0.00 39.32 5.34
771 1945 0.378962 TTTTTCTTCCGTGGTGCGTG 59.621 50.000 0.00 0.00 39.32 5.34
772 1946 0.379316 GTTTTTCTTCCGTGGTGCGT 59.621 50.000 0.00 0.00 39.32 5.24
773 1947 0.317519 GGTTTTTCTTCCGTGGTGCG 60.318 55.000 0.00 0.00 40.95 5.34
774 1948 0.031585 GGGTTTTTCTTCCGTGGTGC 59.968 55.000 0.00 0.00 0.00 5.01
775 1949 1.336755 CAGGGTTTTTCTTCCGTGGTG 59.663 52.381 0.00 0.00 36.39 4.17
782 1970 4.145052 AGGACACATCAGGGTTTTTCTTC 58.855 43.478 0.00 0.00 0.00 2.87
784 1972 3.884037 AGGACACATCAGGGTTTTTCT 57.116 42.857 0.00 0.00 0.00 2.52
790 1978 1.073923 GTTGGAAGGACACATCAGGGT 59.926 52.381 0.00 0.00 0.00 4.34
799 1987 2.362242 CCTCCTCGTTGGAAGGACA 58.638 57.895 2.05 0.00 45.63 4.02
807 1995 1.296715 CTCCAACCCCTCCTCGTTG 59.703 63.158 0.00 0.00 39.25 4.10
848 4078 8.103305 GTGTTTATCACCACTCCATATATGGAT 58.897 37.037 30.35 18.14 46.44 3.41
853 4083 6.759356 CGTTGTGTTTATCACCACTCCATATA 59.241 38.462 0.00 0.00 45.61 0.86
855 4085 4.932799 CGTTGTGTTTATCACCACTCCATA 59.067 41.667 0.00 0.00 45.61 2.74
863 4093 2.351350 CCAAGGCGTTGTGTTTATCACC 60.351 50.000 17.23 0.00 45.61 4.02
909 4139 0.103937 GAGCAGCAGACCGATAGCTT 59.896 55.000 0.00 0.00 36.26 3.74
1034 4264 3.358076 GACCAAGGGCCTCTCGTCG 62.358 68.421 6.46 0.00 0.00 5.12
1037 4267 3.068691 TCGACCAAGGGCCTCTCG 61.069 66.667 6.46 14.01 0.00 4.04
1047 4277 1.975407 GTCCTCCTCCGTCGACCAA 60.975 63.158 10.58 0.00 0.00 3.67
1113 4343 2.374830 CTGCTAGCCTGGGGATGTCG 62.375 65.000 13.29 0.00 0.00 4.35
1116 4346 0.764369 TACCTGCTAGCCTGGGGATG 60.764 60.000 22.55 0.98 36.90 3.51
1136 4366 3.219281 TGTGCACACTCTCTACACAGTA 58.781 45.455 17.42 0.00 36.39 2.74
1138 4368 2.800881 TGTGCACACTCTCTACACAG 57.199 50.000 17.42 0.00 36.39 3.66
1139 4369 2.031870 ACTGTGCACACTCTCTACACA 58.968 47.619 17.42 0.00 38.83 3.72
1145 4375 2.320367 CGAGTTACTGTGCACACTCTC 58.680 52.381 24.44 21.06 34.62 3.20
1146 4376 1.603172 GCGAGTTACTGTGCACACTCT 60.603 52.381 24.44 16.57 34.62 3.24
1147 4377 0.784778 GCGAGTTACTGTGCACACTC 59.215 55.000 17.42 19.01 33.61 3.51
1149 4379 1.213094 ACGCGAGTTACTGTGCACAC 61.213 55.000 17.42 6.22 46.40 3.82
1151 4381 3.932289 ACGCGAGTTACTGTGCAC 58.068 55.556 15.93 10.75 46.40 4.57
1162 4392 2.202440 AATCGACCGTGACGCGAG 60.202 61.111 15.93 2.63 44.77 5.03
1163 4393 1.910216 TACAATCGACCGTGACGCGA 61.910 55.000 15.93 9.84 44.77 5.87
1164 4394 0.864377 ATACAATCGACCGTGACGCG 60.864 55.000 3.53 3.53 40.95 6.01
1165 4395 2.041966 CTATACAATCGACCGTGACGC 58.958 52.381 0.00 0.00 0.00 5.19
1170 4400 4.096833 TGTTAGCACTATACAATCGACCGT 59.903 41.667 0.00 0.00 0.00 4.83
1174 4404 6.918022 CAGATGTGTTAGCACTATACAATCGA 59.082 38.462 11.22 0.00 45.44 3.59
1182 4412 9.836864 TGATAAAATCAGATGTGTTAGCACTAT 57.163 29.630 11.22 3.18 39.21 2.12
1194 4424 7.132863 CACACAGAGCATGATAAAATCAGATG 58.867 38.462 0.00 0.00 43.53 2.90
1195 4425 6.827251 ACACACAGAGCATGATAAAATCAGAT 59.173 34.615 0.00 0.00 43.53 2.90
1196 4426 6.093082 CACACACAGAGCATGATAAAATCAGA 59.907 38.462 0.00 0.00 43.53 3.27
1198 4428 5.392272 GCACACACAGAGCATGATAAAATCA 60.392 40.000 0.00 0.00 44.55 2.57
1199 4429 5.032863 GCACACACAGAGCATGATAAAATC 58.967 41.667 0.00 0.00 33.66 2.17
1235 4476 6.885952 TCAAACTAGGAGTAGCTAGCATAG 57.114 41.667 18.83 10.73 43.09 2.23
1236 4477 6.209589 CCATCAAACTAGGAGTAGCTAGCATA 59.790 42.308 18.83 3.61 0.00 3.14
1237 4478 5.011533 CCATCAAACTAGGAGTAGCTAGCAT 59.988 44.000 18.83 1.59 0.00 3.79
1238 4479 4.342378 CCATCAAACTAGGAGTAGCTAGCA 59.658 45.833 18.83 0.00 0.00 3.49
1239 4480 4.585162 TCCATCAAACTAGGAGTAGCTAGC 59.415 45.833 6.62 6.62 0.00 3.42
1240 4481 6.716934 TTCCATCAAACTAGGAGTAGCTAG 57.283 41.667 0.00 0.00 32.11 3.42
1241 4482 7.676683 AATTCCATCAAACTAGGAGTAGCTA 57.323 36.000 0.00 0.00 32.11 3.32
1242 4483 6.567602 AATTCCATCAAACTAGGAGTAGCT 57.432 37.500 0.00 0.00 32.11 3.32
1243 4484 7.604545 GGATAATTCCATCAAACTAGGAGTAGC 59.395 40.741 0.00 0.00 42.12 3.58
1244 4485 8.875168 AGGATAATTCCATCAAACTAGGAGTAG 58.125 37.037 0.00 0.00 45.30 2.57
1245 4486 8.798975 AGGATAATTCCATCAAACTAGGAGTA 57.201 34.615 0.00 0.00 45.30 2.59
1246 4487 7.698163 AGGATAATTCCATCAAACTAGGAGT 57.302 36.000 0.00 0.00 45.30 3.85
1247 4488 8.844244 CAAAGGATAATTCCATCAAACTAGGAG 58.156 37.037 0.00 0.00 45.30 3.69
1248 4489 8.556589 TCAAAGGATAATTCCATCAAACTAGGA 58.443 33.333 0.00 0.00 45.30 2.94
1249 4490 8.752005 TCAAAGGATAATTCCATCAAACTAGG 57.248 34.615 0.00 0.00 45.30 3.02
1250 4491 9.401058 ACTCAAAGGATAATTCCATCAAACTAG 57.599 33.333 0.00 0.00 45.30 2.57
1252 4493 9.753674 TTACTCAAAGGATAATTCCATCAAACT 57.246 29.630 0.00 0.00 45.30 2.66
1256 4497 9.699410 ACAATTACTCAAAGGATAATTCCATCA 57.301 29.630 0.00 0.00 45.30 3.07
1257 4498 9.956720 CACAATTACTCAAAGGATAATTCCATC 57.043 33.333 0.00 0.00 45.30 3.51
1258 4499 9.479549 ACACAATTACTCAAAGGATAATTCCAT 57.520 29.630 0.00 0.00 45.30 3.41
1259 4500 8.877864 ACACAATTACTCAAAGGATAATTCCA 57.122 30.769 0.00 0.00 45.30 3.53
1260 4501 9.573133 CAACACAATTACTCAAAGGATAATTCC 57.427 33.333 0.00 0.00 42.96 3.01
1265 4506 9.173021 CCATACAACACAATTACTCAAAGGATA 57.827 33.333 0.00 0.00 0.00 2.59
1266 4507 7.669722 ACCATACAACACAATTACTCAAAGGAT 59.330 33.333 0.00 0.00 0.00 3.24
1267 4508 7.001674 ACCATACAACACAATTACTCAAAGGA 58.998 34.615 0.00 0.00 0.00 3.36
1268 4509 7.214467 ACCATACAACACAATTACTCAAAGG 57.786 36.000 0.00 0.00 0.00 3.11
1269 4510 7.114811 GCAACCATACAACACAATTACTCAAAG 59.885 37.037 0.00 0.00 0.00 2.77
1270 4511 6.920758 GCAACCATACAACACAATTACTCAAA 59.079 34.615 0.00 0.00 0.00 2.69
1271 4512 6.039829 TGCAACCATACAACACAATTACTCAA 59.960 34.615 0.00 0.00 0.00 3.02
1272 4513 5.532779 TGCAACCATACAACACAATTACTCA 59.467 36.000 0.00 0.00 0.00 3.41
1273 4514 6.007936 TGCAACCATACAACACAATTACTC 57.992 37.500 0.00 0.00 0.00 2.59
1274 4515 6.398234 TTGCAACCATACAACACAATTACT 57.602 33.333 0.00 0.00 0.00 2.24
1275 4516 7.650834 AATTGCAACCATACAACACAATTAC 57.349 32.000 0.00 0.00 35.22 1.89
1276 4517 9.935241 ATTAATTGCAACCATACAACACAATTA 57.065 25.926 0.00 0.00 37.42 1.40
1277 4518 8.845413 ATTAATTGCAACCATACAACACAATT 57.155 26.923 0.00 0.00 39.06 2.32
1278 4519 9.585099 CTATTAATTGCAACCATACAACACAAT 57.415 29.630 0.00 0.00 0.00 2.71
1279 4520 8.031864 CCTATTAATTGCAACCATACAACACAA 58.968 33.333 0.00 0.00 0.00 3.33
1280 4521 7.542890 CCTATTAATTGCAACCATACAACACA 58.457 34.615 0.00 0.00 0.00 3.72
1281 4522 6.475402 GCCTATTAATTGCAACCATACAACAC 59.525 38.462 0.00 0.00 0.00 3.32
1282 4523 6.153510 TGCCTATTAATTGCAACCATACAACA 59.846 34.615 0.00 0.00 30.85 3.33
1283 4524 6.568869 TGCCTATTAATTGCAACCATACAAC 58.431 36.000 0.00 0.00 30.85 3.32
1284 4525 6.782082 TGCCTATTAATTGCAACCATACAA 57.218 33.333 0.00 0.00 30.85 2.41
1285 4526 6.975196 ATGCCTATTAATTGCAACCATACA 57.025 33.333 14.10 0.00 38.69 2.29
1286 4527 7.432869 TCAATGCCTATTAATTGCAACCATAC 58.567 34.615 14.10 0.00 38.69 2.39
1287 4528 7.505248 TCTCAATGCCTATTAATTGCAACCATA 59.495 33.333 14.10 0.00 38.69 2.74
1288 4529 6.324512 TCTCAATGCCTATTAATTGCAACCAT 59.675 34.615 14.10 0.00 38.69 3.55
1289 4530 5.655974 TCTCAATGCCTATTAATTGCAACCA 59.344 36.000 14.10 0.00 38.69 3.67
1290 4531 6.147864 TCTCAATGCCTATTAATTGCAACC 57.852 37.500 14.10 0.00 38.69 3.77
1291 4532 6.211515 CCTCTCAATGCCTATTAATTGCAAC 58.788 40.000 14.10 0.00 38.69 4.17
1292 4533 5.302568 CCCTCTCAATGCCTATTAATTGCAA 59.697 40.000 14.10 0.00 38.69 4.08
1293 4534 4.828939 CCCTCTCAATGCCTATTAATTGCA 59.171 41.667 12.90 12.90 39.68 4.08
1294 4535 4.219288 CCCCTCTCAATGCCTATTAATTGC 59.781 45.833 0.00 0.00 34.44 3.56
1295 4536 4.219288 GCCCCTCTCAATGCCTATTAATTG 59.781 45.833 0.00 0.00 35.52 2.32
1296 4537 4.411013 GCCCCTCTCAATGCCTATTAATT 58.589 43.478 0.00 0.00 0.00 1.40
1297 4538 3.560025 CGCCCCTCTCAATGCCTATTAAT 60.560 47.826 0.00 0.00 0.00 1.40
1298 4539 2.224523 CGCCCCTCTCAATGCCTATTAA 60.225 50.000 0.00 0.00 0.00 1.40
1299 4540 1.347707 CGCCCCTCTCAATGCCTATTA 59.652 52.381 0.00 0.00 0.00 0.98
1331 4572 2.344025 GTAGTTTAACCACCTCAGCCG 58.656 52.381 0.00 0.00 0.00 5.52
1417 4658 3.521531 TGTACCTGTTGCCTATGATGGAA 59.478 43.478 0.00 0.00 0.00 3.53
1443 4684 3.600388 CCTTGCTAAGTCGGATGAGTTT 58.400 45.455 0.00 0.00 38.66 2.66
1445 4686 1.134670 GCCTTGCTAAGTCGGATGAGT 60.135 52.381 0.00 0.00 0.00 3.41
1446 4687 1.576356 GCCTTGCTAAGTCGGATGAG 58.424 55.000 0.00 0.00 0.00 2.90
1447 4688 0.179111 CGCCTTGCTAAGTCGGATGA 60.179 55.000 0.00 0.00 0.00 2.92
1449 4690 1.144057 CCGCCTTGCTAAGTCGGAT 59.856 57.895 11.32 0.00 42.43 4.18
1450 4691 1.980232 TCCGCCTTGCTAAGTCGGA 60.980 57.895 14.23 14.23 45.70 4.55
1452 4693 0.652592 CAATCCGCCTTGCTAAGTCG 59.347 55.000 0.00 0.00 0.00 4.18
1453 4694 2.024176 TCAATCCGCCTTGCTAAGTC 57.976 50.000 0.00 0.00 0.00 3.01
1454 4695 2.684881 CAATCAATCCGCCTTGCTAAGT 59.315 45.455 0.00 0.00 0.00 2.24
1458 4699 1.952296 GATCAATCAATCCGCCTTGCT 59.048 47.619 0.00 0.00 0.00 3.91
1459 4700 1.334419 CGATCAATCAATCCGCCTTGC 60.334 52.381 0.00 0.00 0.00 4.01
1460 4701 2.032549 GTCGATCAATCAATCCGCCTTG 60.033 50.000 0.00 0.00 0.00 3.61
1461 4702 2.213499 GTCGATCAATCAATCCGCCTT 58.787 47.619 0.00 0.00 0.00 4.35
1462 4703 1.869754 CGTCGATCAATCAATCCGCCT 60.870 52.381 0.00 0.00 0.00 5.52
1463 4704 0.508641 CGTCGATCAATCAATCCGCC 59.491 55.000 0.00 0.00 0.00 6.13
1465 4706 2.054363 CCTCGTCGATCAATCAATCCG 58.946 52.381 0.00 0.00 0.00 4.18
1467 4708 3.243569 ACCTCCTCGTCGATCAATCAATC 60.244 47.826 0.00 0.00 0.00 2.67
1469 4710 2.100197 ACCTCCTCGTCGATCAATCAA 58.900 47.619 0.00 0.00 0.00 2.57
1470 4711 1.763968 ACCTCCTCGTCGATCAATCA 58.236 50.000 0.00 0.00 0.00 2.57
1472 4713 1.825474 ACAACCTCCTCGTCGATCAAT 59.175 47.619 0.00 0.00 0.00 2.57
1473 4714 1.254026 ACAACCTCCTCGTCGATCAA 58.746 50.000 0.00 0.00 0.00 2.57
1474 4715 1.201647 GAACAACCTCCTCGTCGATCA 59.798 52.381 0.00 0.00 0.00 2.92
1476 4717 1.254026 TGAACAACCTCCTCGTCGAT 58.746 50.000 0.00 0.00 0.00 3.59
1477 4718 1.254026 ATGAACAACCTCCTCGTCGA 58.746 50.000 0.00 0.00 0.00 4.20
1478 4719 2.080286 AATGAACAACCTCCTCGTCG 57.920 50.000 0.00 0.00 0.00 5.12
1479 4720 3.186613 GTGAAATGAACAACCTCCTCGTC 59.813 47.826 0.00 0.00 0.00 4.20
1480 4721 3.139077 GTGAAATGAACAACCTCCTCGT 58.861 45.455 0.00 0.00 0.00 4.18
1482 4723 3.486383 TGGTGAAATGAACAACCTCCTC 58.514 45.455 0.00 0.00 0.00 3.71
1483 4724 3.593442 TGGTGAAATGAACAACCTCCT 57.407 42.857 0.00 0.00 0.00 3.69
1486 4727 4.261572 CGTCAATGGTGAAATGAACAACCT 60.262 41.667 0.00 0.00 34.87 3.50
1487 4728 3.980775 CGTCAATGGTGAAATGAACAACC 59.019 43.478 0.00 0.00 34.87 3.77
1501 4789 3.129113 TGCATGAATTTCCTCGTCAATGG 59.871 43.478 0.00 0.00 0.00 3.16
1508 4796 4.295870 CATCCAATGCATGAATTTCCTCG 58.704 43.478 0.00 0.00 0.00 4.63
1518 4806 1.069090 GCTGCCCATCCAATGCATG 59.931 57.895 0.00 0.00 33.97 4.06
1519 4807 1.075525 AGCTGCCCATCCAATGCAT 60.076 52.632 0.00 0.00 33.97 3.96
1521 4809 2.792947 CCAGCTGCCCATCCAATGC 61.793 63.158 8.66 0.00 0.00 3.56
1522 4810 1.076559 TCCAGCTGCCCATCCAATG 60.077 57.895 8.66 0.00 0.00 2.82
1523 4811 1.076485 GTCCAGCTGCCCATCCAAT 60.076 57.895 8.66 0.00 0.00 3.16
1524 4812 2.202236 GAGTCCAGCTGCCCATCCAA 62.202 60.000 8.66 0.00 0.00 3.53
1525 4813 2.611800 AGTCCAGCTGCCCATCCA 60.612 61.111 8.66 0.00 0.00 3.41
1526 4814 2.191641 GAGTCCAGCTGCCCATCC 59.808 66.667 8.66 0.00 0.00 3.51
1527 4815 1.153208 CAGAGTCCAGCTGCCCATC 60.153 63.158 8.66 3.26 0.00 3.51
1693 4981 0.327480 AGGTGGGATGGCAGGATGTA 60.327 55.000 0.00 0.00 39.31 2.29
1715 5003 4.003788 ACGCGTTGCTACCTGCCT 62.004 61.111 5.58 0.00 42.00 4.75
1750 5038 4.148825 GATGGAGTCCGGCAGCGT 62.149 66.667 4.30 0.00 0.00 5.07
1806 5094 1.504359 GCTGTACAAGTACAACGCCA 58.496 50.000 13.45 0.00 44.47 5.69
1829 5117 4.056125 TGCTGGAGCTCGACACCG 62.056 66.667 7.83 0.00 42.66 4.94
1896 5184 0.038892 TGCCGTCTACGAGGTTGTTC 60.039 55.000 3.65 0.00 43.02 3.18
1903 5191 1.226435 GCTGACTGCCGTCTACGAG 60.226 63.158 9.79 0.00 43.02 4.18
1904 5192 1.674651 AGCTGACTGCCGTCTACGA 60.675 57.895 9.79 0.00 44.23 3.43
1941 5232 6.045318 CGACTTGGTAGTAGTAGTAGTGCTA 58.955 44.000 0.00 0.00 33.84 3.49
1944 5235 4.574013 CCCGACTTGGTAGTAGTAGTAGTG 59.426 50.000 0.00 0.00 33.84 2.74
1956 5247 2.745037 GTGGTGCCCGACTTGGTA 59.255 61.111 0.00 0.00 35.15 3.25
1957 5248 4.265056 GGTGGTGCCCGACTTGGT 62.265 66.667 0.00 0.00 35.15 3.67
1958 5249 3.783362 TTGGTGGTGCCCGACTTGG 62.783 63.158 0.00 0.00 36.04 3.61
1959 5250 2.203280 TTGGTGGTGCCCGACTTG 60.203 61.111 0.00 0.00 36.04 3.16
1960 5251 2.203294 GTTGGTGGTGCCCGACTT 60.203 61.111 0.00 0.00 36.17 3.01
1961 5252 4.265056 GGTTGGTGGTGCCCGACT 62.265 66.667 0.00 0.00 38.71 4.18
1963 5254 4.572571 GTGGTTGGTGGTGCCCGA 62.573 66.667 0.00 0.00 36.04 5.14
1990 5282 2.185350 CAGCTTCCAGTCGGCGAT 59.815 61.111 14.79 0.00 0.00 4.58
2035 5328 1.663695 CCAATACGAAACCGAGCCAT 58.336 50.000 0.00 0.00 0.00 4.40
2065 5358 6.920569 AAAGCACCAACCGATATAAGTAAG 57.079 37.500 0.00 0.00 0.00 2.34
2067 5360 6.036300 CGAAAAAGCACCAACCGATATAAGTA 59.964 38.462 0.00 0.00 0.00 2.24
2068 5361 5.163794 CGAAAAAGCACCAACCGATATAAGT 60.164 40.000 0.00 0.00 0.00 2.24
2069 5362 5.263185 CGAAAAAGCACCAACCGATATAAG 58.737 41.667 0.00 0.00 0.00 1.73
2070 5363 4.095185 CCGAAAAAGCACCAACCGATATAA 59.905 41.667 0.00 0.00 0.00 0.98
2071 5364 3.623960 CCGAAAAAGCACCAACCGATATA 59.376 43.478 0.00 0.00 0.00 0.86
2072 5365 2.422127 CCGAAAAAGCACCAACCGATAT 59.578 45.455 0.00 0.00 0.00 1.63
2076 5369 1.007849 CCCGAAAAAGCACCAACCG 60.008 57.895 0.00 0.00 0.00 4.44
2099 6024 2.235016 TCAAGCACCAGCCGTTATTTT 58.765 42.857 0.00 0.00 43.56 1.82
2107 6032 0.312102 GTTCAGTTCAAGCACCAGCC 59.688 55.000 0.00 0.00 43.56 4.85
2108 6033 1.002033 CAGTTCAGTTCAAGCACCAGC 60.002 52.381 0.00 0.00 42.56 4.85
2125 6050 5.276678 CGTTGACGACATTGTTTTAGTCAGT 60.277 40.000 13.73 0.00 43.02 3.41
2126 6051 5.130519 CGTTGACGACATTGTTTTAGTCAG 58.869 41.667 13.73 5.32 43.02 3.51
2127 6052 4.025563 CCGTTGACGACATTGTTTTAGTCA 60.026 41.667 4.91 11.55 43.02 3.41
2128 6053 4.451557 CCGTTGACGACATTGTTTTAGTC 58.548 43.478 4.91 0.40 43.02 2.59
2129 6054 3.303526 GCCGTTGACGACATTGTTTTAGT 60.304 43.478 4.91 0.00 43.02 2.24
2130 6055 3.223157 GCCGTTGACGACATTGTTTTAG 58.777 45.455 4.91 0.00 43.02 1.85
2131 6056 2.348685 CGCCGTTGACGACATTGTTTTA 60.349 45.455 4.91 0.00 43.02 1.52
2133 6058 0.041663 CGCCGTTGACGACATTGTTT 60.042 50.000 4.91 0.00 43.02 2.83
2134 6059 1.567537 CGCCGTTGACGACATTGTT 59.432 52.632 4.91 0.00 43.02 2.83
2135 6060 2.314647 CCGCCGTTGACGACATTGT 61.315 57.895 4.91 0.00 43.02 2.71
2136 6061 2.474266 CCGCCGTTGACGACATTG 59.526 61.111 4.91 0.00 43.02 2.82
2137 6062 3.419759 GCCGCCGTTGACGACATT 61.420 61.111 4.91 0.00 43.02 2.71
2145 6070 4.520846 GATTGCTCGCCGCCGTTG 62.521 66.667 0.00 0.00 38.05 4.10
2146 6071 2.644555 ATAGATTGCTCGCCGCCGTT 62.645 55.000 0.00 0.00 38.05 4.44
2147 6072 2.644555 AATAGATTGCTCGCCGCCGT 62.645 55.000 0.00 0.00 38.05 5.68
2148 6073 0.666274 TAATAGATTGCTCGCCGCCG 60.666 55.000 0.00 0.00 38.05 6.46
2149 6074 0.790814 GTAATAGATTGCTCGCCGCC 59.209 55.000 0.00 0.00 38.05 6.13
2150 6075 0.790814 GGTAATAGATTGCTCGCCGC 59.209 55.000 0.00 0.00 39.77 6.53
2155 6080 0.790814 GCGGCGGTAATAGATTGCTC 59.209 55.000 9.78 0.00 0.00 4.26
2178 6103 0.454196 TGAGTCTAGTATTGCGCGCA 59.546 50.000 33.09 33.09 0.00 6.09
2181 6106 1.478137 CCGTGAGTCTAGTATTGCGC 58.522 55.000 0.00 0.00 0.00 6.09
2182 6107 1.269102 CCCCGTGAGTCTAGTATTGCG 60.269 57.143 0.00 0.00 0.00 4.85
2183 6108 1.755380 ACCCCGTGAGTCTAGTATTGC 59.245 52.381 0.00 0.00 0.00 3.56
2184 6109 2.481449 GCACCCCGTGAGTCTAGTATTG 60.481 54.545 0.00 0.00 35.23 1.90
2185 6110 1.755380 GCACCCCGTGAGTCTAGTATT 59.245 52.381 0.00 0.00 35.23 1.89
2186 6111 1.341679 TGCACCCCGTGAGTCTAGTAT 60.342 52.381 0.00 0.00 35.23 2.12
2187 6112 0.038599 TGCACCCCGTGAGTCTAGTA 59.961 55.000 0.00 0.00 35.23 1.82
2188 6113 0.614979 ATGCACCCCGTGAGTCTAGT 60.615 55.000 0.00 0.00 35.23 2.57
2189 6114 0.103208 GATGCACCCCGTGAGTCTAG 59.897 60.000 0.00 0.00 35.23 2.43
2190 6115 1.327690 GGATGCACCCCGTGAGTCTA 61.328 60.000 0.00 0.00 35.23 2.59
2191 6116 2.660064 GGATGCACCCCGTGAGTCT 61.660 63.158 0.00 0.00 35.23 3.24
2192 6117 2.125106 GGATGCACCCCGTGAGTC 60.125 66.667 0.00 0.00 35.23 3.36
2193 6118 4.082523 CGGATGCACCCCGTGAGT 62.083 66.667 18.26 0.00 41.91 3.41
2194 6119 3.770040 TCGGATGCACCCCGTGAG 61.770 66.667 23.44 0.00 46.53 3.51
2195 6120 4.077184 GTCGGATGCACCCCGTGA 62.077 66.667 23.44 7.71 46.53 4.35
2199 6124 4.832608 GTCCGTCGGATGCACCCC 62.833 72.222 18.75 0.00 32.73 4.95
2200 6125 4.832608 GGTCCGTCGGATGCACCC 62.833 72.222 18.75 9.77 32.73 4.61
2201 6126 2.798148 AAAGGTCCGTCGGATGCACC 62.798 60.000 18.75 14.40 32.73 5.01
2202 6127 0.108520 TAAAGGTCCGTCGGATGCAC 60.109 55.000 18.75 4.63 32.73 4.57
2203 6128 0.108520 GTAAAGGTCCGTCGGATGCA 60.109 55.000 18.75 0.00 32.73 3.96
2204 6129 1.143969 CGTAAAGGTCCGTCGGATGC 61.144 60.000 18.75 5.19 32.73 3.91
2205 6130 0.526954 CCGTAAAGGTCCGTCGGATG 60.527 60.000 18.75 0.00 43.22 3.51
2206 6131 1.669999 CCCGTAAAGGTCCGTCGGAT 61.670 60.000 18.75 3.52 43.22 4.18
2207 6132 2.342650 CCCGTAAAGGTCCGTCGGA 61.343 63.158 10.71 10.71 43.22 4.55
2208 6133 2.182537 CCCGTAAAGGTCCGTCGG 59.817 66.667 4.39 4.39 40.72 4.79
2209 6134 2.182537 CCCCGTAAAGGTCCGTCG 59.817 66.667 0.00 0.00 38.74 5.12
2210 6135 1.079612 CACCCCGTAAAGGTCCGTC 60.080 63.158 0.00 0.00 38.74 4.79
2211 6136 2.586293 CCACCCCGTAAAGGTCCGT 61.586 63.158 0.00 0.00 38.74 4.69
2212 6137 2.266689 CCACCCCGTAAAGGTCCG 59.733 66.667 0.00 0.00 38.74 4.79
2213 6138 2.045634 GCCACCCCGTAAAGGTCC 60.046 66.667 0.00 0.00 38.74 4.46
2214 6139 2.045634 GGCCACCCCGTAAAGGTC 60.046 66.667 0.00 0.00 38.74 3.85
2215 6140 2.462626 TTGGCCACCCCGTAAAGGT 61.463 57.895 3.88 0.00 38.74 3.50
2216 6141 2.437002 TTGGCCACCCCGTAAAGG 59.563 61.111 3.88 0.00 40.63 3.11
2604 6529 8.955388 GGTTTTACGGGGTTGATTAAGTATTAA 58.045 33.333 0.00 0.00 45.80 1.40
2605 6530 7.555914 GGGTTTTACGGGGTTGATTAAGTATTA 59.444 37.037 0.00 0.00 0.00 0.98
2606 6531 6.377996 GGGTTTTACGGGGTTGATTAAGTATT 59.622 38.462 0.00 0.00 0.00 1.89
2607 6532 5.887598 GGGTTTTACGGGGTTGATTAAGTAT 59.112 40.000 0.00 0.00 0.00 2.12
2608 6533 5.252547 GGGTTTTACGGGGTTGATTAAGTA 58.747 41.667 0.00 0.00 0.00 2.24
2609 6534 4.081406 GGGTTTTACGGGGTTGATTAAGT 58.919 43.478 0.00 0.00 0.00 2.24
2610 6535 3.444742 GGGGTTTTACGGGGTTGATTAAG 59.555 47.826 0.00 0.00 0.00 1.85
2611 6536 3.429492 GGGGTTTTACGGGGTTGATTAA 58.571 45.455 0.00 0.00 0.00 1.40
2612 6537 2.617532 CGGGGTTTTACGGGGTTGATTA 60.618 50.000 0.00 0.00 0.00 1.75
2613 6538 1.887522 CGGGGTTTTACGGGGTTGATT 60.888 52.381 0.00 0.00 0.00 2.57
2614 6539 0.322726 CGGGGTTTTACGGGGTTGAT 60.323 55.000 0.00 0.00 0.00 2.57
2615 6540 1.072852 CGGGGTTTTACGGGGTTGA 59.927 57.895 0.00 0.00 0.00 3.18
2616 6541 0.036022 TACGGGGTTTTACGGGGTTG 59.964 55.000 0.00 0.00 0.00 3.77
2617 6542 0.767998 TTACGGGGTTTTACGGGGTT 59.232 50.000 0.00 0.00 0.00 4.11
2618 6543 0.767998 TTTACGGGGTTTTACGGGGT 59.232 50.000 0.00 0.00 0.00 4.95
2619 6544 1.164411 GTTTACGGGGTTTTACGGGG 58.836 55.000 0.00 0.00 0.00 5.73
2620 6545 1.535028 GTGTTTACGGGGTTTTACGGG 59.465 52.381 0.00 0.00 0.00 5.28
2621 6546 1.535028 GGTGTTTACGGGGTTTTACGG 59.465 52.381 0.00 0.00 0.00 4.02
2622 6547 1.535028 GGGTGTTTACGGGGTTTTACG 59.465 52.381 0.00 0.00 0.00 3.18
2623 6548 1.885887 GGGGTGTTTACGGGGTTTTAC 59.114 52.381 0.00 0.00 0.00 2.01
2624 6549 1.544314 CGGGGTGTTTACGGGGTTTTA 60.544 52.381 0.00 0.00 0.00 1.52
2625 6550 0.822944 CGGGGTGTTTACGGGGTTTT 60.823 55.000 0.00 0.00 0.00 2.43
2626 6551 1.228215 CGGGGTGTTTACGGGGTTT 60.228 57.895 0.00 0.00 0.00 3.27
2627 6552 2.431244 CGGGGTGTTTACGGGGTT 59.569 61.111 0.00 0.00 0.00 4.11
2628 6553 2.848679 ACGGGGTGTTTACGGGGT 60.849 61.111 0.00 0.00 0.00 4.95
2629 6554 2.358984 CACGGGGTGTTTACGGGG 60.359 66.667 0.00 0.00 0.00 5.73
2630 6555 1.375013 CTCACGGGGTGTTTACGGG 60.375 63.158 0.00 0.00 34.79 5.28
2631 6556 0.947180 CACTCACGGGGTGTTTACGG 60.947 60.000 0.00 0.00 34.79 4.02
2632 6557 0.249573 ACACTCACGGGGTGTTTACG 60.250 55.000 6.15 0.00 44.25 3.18
2633 6558 2.680577 CTACACTCACGGGGTGTTTAC 58.319 52.381 15.55 0.00 44.25 2.01
2634 6559 1.001181 GCTACACTCACGGGGTGTTTA 59.999 52.381 15.55 0.60 44.25 2.01
2635 6560 0.250166 GCTACACTCACGGGGTGTTT 60.250 55.000 15.55 0.00 44.25 2.83
2636 6561 1.370064 GCTACACTCACGGGGTGTT 59.630 57.895 15.55 2.97 44.25 3.32
2638 6563 0.036388 AATGCTACACTCACGGGGTG 60.036 55.000 4.93 4.93 40.19 4.61
2639 6564 0.036388 CAATGCTACACTCACGGGGT 60.036 55.000 0.00 0.00 34.87 4.95
2640 6565 1.369091 GCAATGCTACACTCACGGGG 61.369 60.000 0.00 0.00 0.00 5.73
2641 6566 0.391661 AGCAATGCTACACTCACGGG 60.392 55.000 5.69 0.00 36.99 5.28
2642 6567 1.002366 GAGCAATGCTACACTCACGG 58.998 55.000 8.12 0.00 39.88 4.94
2643 6568 2.001812 AGAGCAATGCTACACTCACG 57.998 50.000 8.12 0.00 39.88 4.35
2644 6569 4.054671 GGATAGAGCAATGCTACACTCAC 58.945 47.826 8.12 0.00 39.88 3.51
2645 6570 3.243535 CGGATAGAGCAATGCTACACTCA 60.244 47.826 8.12 0.00 39.88 3.41
2646 6571 3.243569 ACGGATAGAGCAATGCTACACTC 60.244 47.826 8.12 2.91 39.88 3.51
2647 6572 2.695666 ACGGATAGAGCAATGCTACACT 59.304 45.455 8.12 3.70 39.88 3.55
2648 6573 3.099267 ACGGATAGAGCAATGCTACAC 57.901 47.619 8.12 0.00 39.88 2.90
2649 6574 3.304458 CGTACGGATAGAGCAATGCTACA 60.304 47.826 8.12 0.00 39.88 2.74
2650 6575 3.058432 TCGTACGGATAGAGCAATGCTAC 60.058 47.826 16.52 1.89 39.88 3.58
2651 6576 3.058432 GTCGTACGGATAGAGCAATGCTA 60.058 47.826 16.52 0.00 39.88 3.49
2652 6577 1.954382 TCGTACGGATAGAGCAATGCT 59.046 47.619 16.52 7.79 43.88 3.79
2653 6578 2.052157 GTCGTACGGATAGAGCAATGC 58.948 52.381 16.52 0.00 0.00 3.56
2654 6579 2.662700 GGTCGTACGGATAGAGCAATG 58.337 52.381 16.52 0.00 33.15 2.82
2655 6580 1.266175 CGGTCGTACGGATAGAGCAAT 59.734 52.381 16.52 0.00 33.15 3.56
2656 6581 0.659427 CGGTCGTACGGATAGAGCAA 59.341 55.000 16.52 0.00 33.15 3.91
2657 6582 1.779025 GCGGTCGTACGGATAGAGCA 61.779 60.000 16.52 0.00 33.15 4.26
2658 6583 1.082235 GCGGTCGTACGGATAGAGC 60.082 63.158 16.52 9.08 0.00 4.09
2659 6584 0.041488 GTGCGGTCGTACGGATAGAG 60.041 60.000 16.52 2.84 36.38 2.43
2660 6585 2.016961 GTGCGGTCGTACGGATAGA 58.983 57.895 16.52 0.00 36.38 1.98
2661 6586 4.603216 GTGCGGTCGTACGGATAG 57.397 61.111 16.52 6.04 36.38 2.08
2672 6597 0.320421 GGATATATGGCACGTGCGGT 60.320 55.000 32.35 24.74 43.26 5.68
2673 6598 1.351430 CGGATATATGGCACGTGCGG 61.351 60.000 32.35 10.02 43.26 5.69
2676 6601 1.194547 GCAACGGATATATGGCACGTG 59.805 52.381 12.28 12.28 37.87 4.49
2683 6608 6.486253 ACAATAAGCAGCAACGGATATATG 57.514 37.500 0.00 0.00 0.00 1.78
2719 6644 8.552296 AGAGATTATTCCTATTCAACAGGTGTT 58.448 33.333 0.00 0.00 39.12 3.32
2721 6646 7.989741 ACAGAGATTATTCCTATTCAACAGGTG 59.010 37.037 0.00 0.00 34.56 4.00
2722 6647 8.095452 ACAGAGATTATTCCTATTCAACAGGT 57.905 34.615 0.00 0.00 34.56 4.00
2723 6648 8.970859 AACAGAGATTATTCCTATTCAACAGG 57.029 34.615 0.00 0.00 34.20 4.00
2733 6658 8.940397 TTGAAGGAAAAACAGAGATTATTCCT 57.060 30.769 0.00 0.00 46.40 3.36
2734 6659 8.246871 CCTTGAAGGAAAAACAGAGATTATTCC 58.753 37.037 4.95 0.00 37.67 3.01
2735 6660 7.757173 GCCTTGAAGGAAAAACAGAGATTATTC 59.243 37.037 16.93 0.00 37.67 1.75
2736 6661 7.310052 GGCCTTGAAGGAAAAACAGAGATTATT 60.310 37.037 16.93 0.00 37.67 1.40
2737 6662 6.153510 GGCCTTGAAGGAAAAACAGAGATTAT 59.846 38.462 16.93 0.00 37.67 1.28
2738 6663 5.476945 GGCCTTGAAGGAAAAACAGAGATTA 59.523 40.000 16.93 0.00 37.67 1.75
2739 6664 4.281941 GGCCTTGAAGGAAAAACAGAGATT 59.718 41.667 16.93 0.00 37.67 2.40
2740 6665 3.829026 GGCCTTGAAGGAAAAACAGAGAT 59.171 43.478 16.93 0.00 37.67 2.75
2741 6666 3.117512 AGGCCTTGAAGGAAAAACAGAGA 60.118 43.478 16.93 0.00 37.67 3.10
2742 6667 3.225940 AGGCCTTGAAGGAAAAACAGAG 58.774 45.455 16.93 0.00 37.67 3.35
2743 6668 3.117512 AGAGGCCTTGAAGGAAAAACAGA 60.118 43.478 16.93 0.00 37.67 3.41
2744 6669 3.225940 AGAGGCCTTGAAGGAAAAACAG 58.774 45.455 16.93 0.00 37.67 3.16
2745 6670 3.312736 AGAGGCCTTGAAGGAAAAACA 57.687 42.857 16.93 0.00 37.67 2.83
2746 6671 3.005897 GGAAGAGGCCTTGAAGGAAAAAC 59.994 47.826 16.93 0.00 37.67 2.43
2747 6672 3.230976 GGAAGAGGCCTTGAAGGAAAAA 58.769 45.455 16.93 0.00 37.67 1.94
2748 6673 2.176798 TGGAAGAGGCCTTGAAGGAAAA 59.823 45.455 16.93 0.00 37.67 2.29
2749 6674 1.780309 TGGAAGAGGCCTTGAAGGAAA 59.220 47.619 16.93 0.00 37.67 3.13
2750 6675 1.444933 TGGAAGAGGCCTTGAAGGAA 58.555 50.000 16.93 0.00 37.67 3.36
2751 6676 1.444933 TTGGAAGAGGCCTTGAAGGA 58.555 50.000 16.93 0.00 37.67 3.36
2752 6677 2.097825 CATTGGAAGAGGCCTTGAAGG 58.902 52.381 6.77 6.92 38.80 3.46
2753 6678 1.475682 GCATTGGAAGAGGCCTTGAAG 59.524 52.381 6.77 0.00 31.62 3.02
2754 6679 1.203038 TGCATTGGAAGAGGCCTTGAA 60.203 47.619 6.77 0.00 31.62 2.69
2755 6680 0.405198 TGCATTGGAAGAGGCCTTGA 59.595 50.000 6.77 0.00 31.62 3.02
2756 6681 1.481871 ATGCATTGGAAGAGGCCTTG 58.518 50.000 6.77 0.00 31.62 3.61
2778 6703 6.127897 GCACTTAACACCTCATCTTTAAGCAT 60.128 38.462 0.00 0.00 35.72 3.79
2780 6705 5.181245 TGCACTTAACACCTCATCTTTAAGC 59.819 40.000 0.00 0.00 35.72 3.09
2784 6709 7.759489 TTTATGCACTTAACACCTCATCTTT 57.241 32.000 0.00 0.00 0.00 2.52
2785 6710 7.665559 TCTTTTATGCACTTAACACCTCATCTT 59.334 33.333 0.00 0.00 0.00 2.40
2790 6715 7.593825 ACATTCTTTTATGCACTTAACACCTC 58.406 34.615 0.00 0.00 0.00 3.85
2792 6717 7.484959 GCTACATTCTTTTATGCACTTAACACC 59.515 37.037 0.00 0.00 0.00 4.16
2793 6718 8.020819 TGCTACATTCTTTTATGCACTTAACAC 58.979 33.333 0.00 0.00 0.00 3.32
2796 6721 8.792633 AGTTGCTACATTCTTTTATGCACTTAA 58.207 29.630 0.13 0.00 0.00 1.85
2806 6731 9.507329 TTGAGAGATTAGTTGCTACATTCTTTT 57.493 29.630 0.13 0.00 0.00 2.27
2808 6733 9.107177 CATTGAGAGATTAGTTGCTACATTCTT 57.893 33.333 0.13 0.00 0.00 2.52
2809 6734 7.226325 GCATTGAGAGATTAGTTGCTACATTCT 59.774 37.037 0.13 0.00 0.00 2.40
2810 6735 7.011763 TGCATTGAGAGATTAGTTGCTACATTC 59.988 37.037 0.13 0.00 0.00 2.67
2811 6736 6.825213 TGCATTGAGAGATTAGTTGCTACATT 59.175 34.615 0.13 0.00 0.00 2.71
2812 6737 6.351711 TGCATTGAGAGATTAGTTGCTACAT 58.648 36.000 0.13 0.00 0.00 2.29
2814 6739 6.857777 ATGCATTGAGAGATTAGTTGCTAC 57.142 37.500 0.00 0.00 0.00 3.58
2815 6740 6.825213 ACAATGCATTGAGAGATTAGTTGCTA 59.175 34.615 38.99 0.00 40.14 3.49
2816 6741 5.651139 ACAATGCATTGAGAGATTAGTTGCT 59.349 36.000 38.99 13.93 40.14 3.91
2817 6742 5.888105 ACAATGCATTGAGAGATTAGTTGC 58.112 37.500 38.99 0.00 40.14 4.17
2818 6743 6.190264 CGACAATGCATTGAGAGATTAGTTG 58.810 40.000 38.99 17.43 40.14 3.16
2820 6745 4.272018 GCGACAATGCATTGAGAGATTAGT 59.728 41.667 38.99 18.07 40.14 2.24
2821 6746 4.510711 AGCGACAATGCATTGAGAGATTAG 59.489 41.667 38.99 20.09 40.14 1.73
2823 6748 3.276857 AGCGACAATGCATTGAGAGATT 58.723 40.909 38.99 20.16 40.14 2.40
2824 6749 2.915349 AGCGACAATGCATTGAGAGAT 58.085 42.857 38.99 25.74 40.14 2.75
2827 6752 2.352651 GCTAAGCGACAATGCATTGAGA 59.647 45.455 38.99 18.58 40.14 3.27
2828 6753 2.353889 AGCTAAGCGACAATGCATTGAG 59.646 45.455 38.99 30.88 40.14 3.02
2830 6755 2.838386 AGCTAAGCGACAATGCATTG 57.162 45.000 32.74 32.74 43.26 2.82
2831 6756 3.855689 AAAGCTAAGCGACAATGCATT 57.144 38.095 5.99 5.99 37.31 3.56
2834 6759 2.933769 ACAAAAGCTAAGCGACAATGC 58.066 42.857 0.00 0.00 0.00 3.56
2882 6807 1.143183 TATCGAAGCGGGGCTCAAC 59.857 57.895 0.00 0.00 38.25 3.18
2883 6808 1.143183 GTATCGAAGCGGGGCTCAA 59.857 57.895 0.00 0.00 38.25 3.02
2891 6816 1.948145 AGTAGGGAGTGTATCGAAGCG 59.052 52.381 0.00 0.00 0.00 4.68
2893 6818 7.040473 ACATTTAGTAGGGAGTGTATCGAAG 57.960 40.000 0.00 0.00 0.00 3.79
2915 6840 9.646427 GCAAAGGTCAATTTTACCATTTATACA 57.354 29.630 8.98 0.00 39.64 2.29
2916 6841 9.869757 AGCAAAGGTCAATTTTACCATTTATAC 57.130 29.630 8.98 0.00 39.64 1.47
2920 6845 9.791801 ATTTAGCAAAGGTCAATTTTACCATTT 57.208 25.926 8.98 4.72 39.64 2.32
2921 6846 9.791801 AATTTAGCAAAGGTCAATTTTACCATT 57.208 25.926 8.98 1.42 39.64 3.16
2922 6847 9.218440 CAATTTAGCAAAGGTCAATTTTACCAT 57.782 29.630 8.98 0.00 39.64 3.55
2923 6848 8.207545 ACAATTTAGCAAAGGTCAATTTTACCA 58.792 29.630 8.98 0.00 39.64 3.25
2924 6849 8.601845 ACAATTTAGCAAAGGTCAATTTTACC 57.398 30.769 0.00 0.00 37.27 2.85
2926 6851 9.699703 GGTACAATTTAGCAAAGGTCAATTTTA 57.300 29.630 0.00 0.00 0.00 1.52
2927 6852 8.428852 AGGTACAATTTAGCAAAGGTCAATTTT 58.571 29.630 0.00 0.00 0.00 1.82
2928 6853 7.962441 AGGTACAATTTAGCAAAGGTCAATTT 58.038 30.769 0.00 0.00 0.00 1.82
2929 6854 7.539034 AGGTACAATTTAGCAAAGGTCAATT 57.461 32.000 0.00 0.00 0.00 2.32
2930 6855 8.644374 TTAGGTACAATTTAGCAAAGGTCAAT 57.356 30.769 0.00 0.00 0.00 2.57
2931 6856 8.644374 ATTAGGTACAATTTAGCAAAGGTCAA 57.356 30.769 0.00 0.00 0.00 3.18
2932 6857 8.644374 AATTAGGTACAATTTAGCAAAGGTCA 57.356 30.769 0.00 0.00 0.00 4.02
2933 6858 9.569167 GAAATTAGGTACAATTTAGCAAAGGTC 57.431 33.333 4.40 0.00 38.04 3.85
2934 6859 9.084533 TGAAATTAGGTACAATTTAGCAAAGGT 57.915 29.630 4.40 0.00 38.04 3.50
2939 6864 9.386010 ACGTATGAAATTAGGTACAATTTAGCA 57.614 29.630 4.40 1.42 38.04 3.49
2946 6871 9.483916 CCATCATACGTATGAAATTAGGTACAA 57.516 33.333 34.92 13.44 44.96 2.41
2947 6872 8.092068 CCCATCATACGTATGAAATTAGGTACA 58.908 37.037 34.92 13.62 44.96 2.90
2948 6873 8.092687 ACCCATCATACGTATGAAATTAGGTAC 58.907 37.037 34.92 0.00 44.96 3.34
2949 6874 8.197592 ACCCATCATACGTATGAAATTAGGTA 57.802 34.615 34.92 14.76 44.96 3.08
2950 6875 7.074653 ACCCATCATACGTATGAAATTAGGT 57.925 36.000 34.92 29.77 44.96 3.08
2951 6876 6.310467 CGACCCATCATACGTATGAAATTAGG 59.690 42.308 34.92 29.27 44.96 2.69
2952 6877 6.183360 GCGACCCATCATACGTATGAAATTAG 60.183 42.308 34.92 25.10 44.96 1.73
2953 6878 5.636121 GCGACCCATCATACGTATGAAATTA 59.364 40.000 34.92 17.41 44.96 1.40
2954 6879 4.451096 GCGACCCATCATACGTATGAAATT 59.549 41.667 34.92 20.41 44.96 1.82
2955 6880 3.994392 GCGACCCATCATACGTATGAAAT 59.006 43.478 34.92 21.07 44.96 2.17
2956 6881 3.386486 GCGACCCATCATACGTATGAAA 58.614 45.455 34.92 18.77 44.96 2.69
2957 6882 2.288579 GGCGACCCATCATACGTATGAA 60.289 50.000 34.92 21.58 44.96 2.57
2958 6883 1.271379 GGCGACCCATCATACGTATGA 59.729 52.381 33.83 33.83 45.78 2.15
2959 6884 1.710013 GGCGACCCATCATACGTATG 58.290 55.000 26.35 26.35 35.04 2.39
2973 6898 2.007608 GATGTAAACCAAGAGGGCGAC 58.992 52.381 0.00 0.00 42.05 5.19
2974 6899 1.065709 GGATGTAAACCAAGAGGGCGA 60.066 52.381 0.00 0.00 42.05 5.54
2975 6900 1.339631 TGGATGTAAACCAAGAGGGCG 60.340 52.381 0.00 0.00 34.98 6.13
2976 6901 2.092323 GTGGATGTAAACCAAGAGGGC 58.908 52.381 0.00 0.00 42.00 5.19
2977 6902 2.620627 GGGTGGATGTAAACCAAGAGGG 60.621 54.545 0.00 0.00 42.00 4.30
2978 6903 2.723273 GGGTGGATGTAAACCAAGAGG 58.277 52.381 0.00 0.00 42.00 3.69
2979 6904 2.356135 CGGGTGGATGTAAACCAAGAG 58.644 52.381 0.00 0.00 42.00 2.85
2980 6905 1.612199 GCGGGTGGATGTAAACCAAGA 60.612 52.381 0.00 0.00 42.00 3.02
2981 6906 0.808755 GCGGGTGGATGTAAACCAAG 59.191 55.000 0.00 0.00 42.00 3.61
2982 6907 0.402504 AGCGGGTGGATGTAAACCAA 59.597 50.000 0.00 0.00 42.00 3.67
2983 6908 0.322098 CAGCGGGTGGATGTAAACCA 60.322 55.000 0.00 0.00 35.87 3.67
2984 6909 0.322187 ACAGCGGGTGGATGTAAACC 60.322 55.000 12.33 0.00 44.99 3.27
2985 6910 2.389962 TACAGCGGGTGGATGTAAAC 57.610 50.000 12.33 0.00 44.99 2.01
2988 6913 0.538118 GGTTACAGCGGGTGGATGTA 59.462 55.000 12.33 0.00 44.99 2.29
2990 6915 0.322098 TTGGTTACAGCGGGTGGATG 60.322 55.000 12.33 0.00 38.25 3.51
2991 6916 0.035439 CTTGGTTACAGCGGGTGGAT 60.035 55.000 12.33 0.00 0.00 3.41
2992 6917 1.373435 CTTGGTTACAGCGGGTGGA 59.627 57.895 12.33 0.00 0.00 4.02
2993 6918 1.072505 ACTTGGTTACAGCGGGTGG 59.927 57.895 12.33 0.00 0.00 4.61
2994 6919 1.234615 CCACTTGGTTACAGCGGGTG 61.235 60.000 5.50 5.50 0.00 4.61
2995 6920 1.072505 CCACTTGGTTACAGCGGGT 59.927 57.895 0.00 0.00 0.00 5.28
2996 6921 1.674322 CCCACTTGGTTACAGCGGG 60.674 63.158 0.00 0.00 0.00 6.13
2997 6922 0.953960 GTCCCACTTGGTTACAGCGG 60.954 60.000 0.00 0.00 34.77 5.52
2998 6923 0.250124 TGTCCCACTTGGTTACAGCG 60.250 55.000 0.00 0.00 34.77 5.18
2999 6924 1.607148 GTTGTCCCACTTGGTTACAGC 59.393 52.381 0.00 0.00 32.86 4.40
3000 6925 2.878406 CAGTTGTCCCACTTGGTTACAG 59.122 50.000 0.00 0.00 32.86 2.74
3001 6926 2.506231 TCAGTTGTCCCACTTGGTTACA 59.494 45.455 0.00 0.00 34.77 2.41
3002 6927 2.876550 GTCAGTTGTCCCACTTGGTTAC 59.123 50.000 0.00 0.00 34.77 2.50
3003 6928 2.775384 AGTCAGTTGTCCCACTTGGTTA 59.225 45.455 0.00 0.00 34.77 2.85
3004 6929 1.564348 AGTCAGTTGTCCCACTTGGTT 59.436 47.619 0.00 0.00 34.77 3.67
3005 6930 1.213296 AGTCAGTTGTCCCACTTGGT 58.787 50.000 0.00 0.00 34.77 3.67
3006 6931 1.949525 CAAGTCAGTTGTCCCACTTGG 59.050 52.381 3.23 0.00 41.32 3.61
3016 6941 2.992089 AGGCACGACAAGTCAGTTG 58.008 52.632 0.72 0.00 42.48 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.