Multiple sequence alignment - TraesCS4A01G409800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G409800 chr4A 100.000 4196 0 0 1 4196 682993271 682989076 0.000000e+00 7749.0
1 TraesCS4A01G409800 chr4A 89.792 2263 205 17 1033 3277 683259029 683256775 0.000000e+00 2876.0
2 TraesCS4A01G409800 chr4D 92.939 2620 142 18 804 3417 475954752 475952170 0.000000e+00 3773.0
3 TraesCS4A01G409800 chr4D 87.719 2402 234 36 1039 3412 476199441 476197073 0.000000e+00 2745.0
4 TraesCS4A01G409800 chr4D 92.920 113 8 0 3649 3761 475952063 475951951 9.330000e-37 165.0
5 TraesCS4A01G409800 chr4D 93.976 83 4 1 3474 3555 315809158 315809076 1.580000e-24 124.0
6 TraesCS4A01G409800 chr4B 91.753 2498 171 25 862 3341 600376200 600378680 0.000000e+00 3439.0
7 TraesCS4A01G409800 chr4B 88.405 2432 218 32 996 3412 600433244 600430862 0.000000e+00 2870.0
8 TraesCS4A01G409800 chr4B 100.000 37 0 0 1535 1571 339449905 339449941 7.530000e-08 69.4
9 TraesCS4A01G409800 chr6A 98.654 743 7 1 58 800 553764598 553765337 0.000000e+00 1314.0
10 TraesCS4A01G409800 chr6A 79.787 188 36 2 1192 1378 563730108 563729922 7.320000e-28 135.0
11 TraesCS4A01G409800 chr1A 90.848 743 57 5 58 800 441837907 441837176 0.000000e+00 985.0
12 TraesCS4A01G409800 chr1A 93.827 81 3 2 3477 3555 397087436 397087516 2.050000e-23 121.0
13 TraesCS4A01G409800 chr7D 93.868 636 38 1 58 693 599195829 599196463 0.000000e+00 957.0
14 TraesCS4A01G409800 chr7D 96.226 212 8 0 3985 4196 194092343 194092132 8.630000e-92 348.0
15 TraesCS4A01G409800 chr7D 96.226 212 8 0 3985 4196 389233839 389234050 8.630000e-92 348.0
16 TraesCS4A01G409800 chr7D 96.226 212 7 1 3985 4196 146519349 146519139 3.110000e-91 346.0
17 TraesCS4A01G409800 chr7D 92.513 187 10 2 3762 3944 449448665 449448851 8.940000e-67 265.0
18 TraesCS4A01G409800 chr7D 91.053 190 17 0 3751 3940 179219883 179220072 1.500000e-64 257.0
19 TraesCS4A01G409800 chr3A 89.785 744 58 7 58 801 437989883 437990608 0.000000e+00 937.0
20 TraesCS4A01G409800 chr3A 92.571 525 13 9 276 800 572542958 572542460 0.000000e+00 730.0
21 TraesCS4A01G409800 chr3A 97.738 221 5 0 58 278 572548943 572548723 8.510000e-102 381.0
22 TraesCS4A01G409800 chr3A 96.226 212 7 1 3985 4196 520453734 520453524 3.110000e-91 346.0
23 TraesCS4A01G409800 chr3A 82.065 184 23 7 58 237 545282605 545282782 9.400000e-32 148.0
24 TraesCS4A01G409800 chr5D 90.924 595 35 7 206 800 370956494 370957069 0.000000e+00 782.0
25 TraesCS4A01G409800 chr5D 95.775 213 8 1 3985 4196 115965724 115965512 4.020000e-90 342.0
26 TraesCS4A01G409800 chr5D 95.755 212 9 0 3985 4196 214404874 214404663 4.020000e-90 342.0
27 TraesCS4A01G409800 chr5D 72.199 1187 267 47 1421 2583 126958213 126957066 5.270000e-79 305.0
28 TraesCS4A01G409800 chr5D 92.632 190 14 0 3755 3944 408093077 408093266 1.490000e-69 274.0
29 TraesCS4A01G409800 chr5D 94.937 79 3 1 3479 3556 560280815 560280893 5.700000e-24 122.0
30 TraesCS4A01G409800 chr1D 84.444 765 78 22 58 800 474732097 474732842 0.000000e+00 715.0
31 TraesCS4A01G409800 chr1D 91.860 86 5 2 3471 3555 493673839 493673755 7.370000e-23 119.0
32 TraesCS4A01G409800 chr2A 82.893 719 87 22 58 755 640273270 640273973 7.710000e-172 614.0
33 TraesCS4A01G409800 chr2A 96.203 79 2 1 3478 3555 694587401 694587479 1.220000e-25 128.0
34 TraesCS4A01G409800 chr6D 97.642 212 4 1 3985 4196 379593442 379593232 3.080000e-96 363.0
35 TraesCS4A01G409800 chr6D 95.755 212 9 0 3985 4196 228084618 228084407 4.020000e-90 342.0
36 TraesCS4A01G409800 chr6D 93.011 186 13 0 3759 3944 348607204 348607389 5.350000e-69 272.0
37 TraesCS4A01G409800 chr6D 92.973 185 13 0 3760 3944 112815917 112815733 1.920000e-68 270.0
38 TraesCS4A01G409800 chr6D 92.857 182 12 1 3760 3940 436404223 436404404 3.220000e-66 263.0
39 TraesCS4A01G409800 chr6D 88.235 102 9 3 3457 3555 28399232 28399333 7.370000e-23 119.0
40 TraesCS4A01G409800 chr6D 78.075 187 41 0 1192 1378 420758385 420758571 7.370000e-23 119.0
41 TraesCS4A01G409800 chr7B 79.661 531 85 21 289 811 608864596 608864081 1.110000e-95 361.0
42 TraesCS4A01G409800 chr7B 89.216 102 10 1 53 154 608875212 608875112 4.400000e-25 126.0
43 TraesCS4A01G409800 chr7B 97.500 40 1 0 1532 1571 641246817 641246856 7.530000e-08 69.4
44 TraesCS4A01G409800 chr2D 97.608 209 5 0 3985 4193 178434361 178434569 3.990000e-95 359.0
45 TraesCS4A01G409800 chr2D 90.404 198 18 1 3747 3944 414295099 414295295 4.160000e-65 259.0
46 TraesCS4A01G409800 chr2D 89.091 55 6 0 58 112 58684442 58684388 7.530000e-08 69.4
47 TraesCS4A01G409800 chr5A 74.069 779 182 19 1421 2189 142751528 142750760 6.820000e-78 302.0
48 TraesCS4A01G409800 chr5A 95.062 81 3 1 3476 3555 469102490 469102570 4.400000e-25 126.0
49 TraesCS4A01G409800 chr5A 96.053 76 3 0 3479 3554 382961773 382961848 1.580000e-24 124.0
50 TraesCS4A01G409800 chr3D 92.973 185 13 0 3760 3944 299744308 299744492 1.920000e-68 270.0
51 TraesCS4A01G409800 chr3D 92.896 183 13 0 3762 3944 575732559 575732377 2.490000e-67 267.0
52 TraesCS4A01G409800 chr3D 82.828 297 48 3 256 550 18294444 18294739 3.220000e-66 263.0
53 TraesCS4A01G409800 chr3D 80.526 190 34 3 251 437 18617194 18617383 4.370000e-30 143.0
54 TraesCS4A01G409800 chr3D 91.071 56 3 2 58 112 184141011 184141065 1.620000e-09 75.0
55 TraesCS4A01G409800 chr3D 100.000 31 0 0 93 123 18617051 18617081 1.630000e-04 58.4
56 TraesCS4A01G409800 chrUn 82.520 246 38 5 256 498 37861962 37861719 1.180000e-50 211.0
57 TraesCS4A01G409800 chrUn 100.000 29 0 0 70 98 12175156 12175184 2.000000e-03 54.7
58 TraesCS4A01G409800 chr6B 79.679 187 38 0 1192 1378 634044189 634044375 7.320000e-28 135.0
59 TraesCS4A01G409800 chr6B 94.203 69 4 0 1183 1251 678695203 678695135 5.740000e-19 106.0
60 TraesCS4A01G409800 chr5B 92.771 83 5 1 3474 3555 377216558 377216476 7.370000e-23 119.0
61 TraesCS4A01G409800 chr5B 96.970 66 2 0 58 123 545522874 545522809 1.230000e-20 111.0
62 TraesCS4A01G409800 chr5B 90.000 50 5 0 2534 2583 140114928 140114977 9.740000e-07 65.8
63 TraesCS4A01G409800 chr1B 87.838 74 5 4 56 126 121562900 121562972 2.690000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G409800 chr4A 682989076 682993271 4195 True 7749 7749 100.0000 1 4196 1 chr4A.!!$R1 4195
1 TraesCS4A01G409800 chr4A 683256775 683259029 2254 True 2876 2876 89.7920 1033 3277 1 chr4A.!!$R2 2244
2 TraesCS4A01G409800 chr4D 476197073 476199441 2368 True 2745 2745 87.7190 1039 3412 1 chr4D.!!$R2 2373
3 TraesCS4A01G409800 chr4D 475951951 475954752 2801 True 1969 3773 92.9295 804 3761 2 chr4D.!!$R3 2957
4 TraesCS4A01G409800 chr4B 600376200 600378680 2480 False 3439 3439 91.7530 862 3341 1 chr4B.!!$F2 2479
5 TraesCS4A01G409800 chr4B 600430862 600433244 2382 True 2870 2870 88.4050 996 3412 1 chr4B.!!$R1 2416
6 TraesCS4A01G409800 chr6A 553764598 553765337 739 False 1314 1314 98.6540 58 800 1 chr6A.!!$F1 742
7 TraesCS4A01G409800 chr1A 441837176 441837907 731 True 985 985 90.8480 58 800 1 chr1A.!!$R1 742
8 TraesCS4A01G409800 chr7D 599195829 599196463 634 False 957 957 93.8680 58 693 1 chr7D.!!$F4 635
9 TraesCS4A01G409800 chr3A 437989883 437990608 725 False 937 937 89.7850 58 801 1 chr3A.!!$F1 743
10 TraesCS4A01G409800 chr5D 370956494 370957069 575 False 782 782 90.9240 206 800 1 chr5D.!!$F1 594
11 TraesCS4A01G409800 chr5D 126957066 126958213 1147 True 305 305 72.1990 1421 2583 1 chr5D.!!$R2 1162
12 TraesCS4A01G409800 chr1D 474732097 474732842 745 False 715 715 84.4440 58 800 1 chr1D.!!$F1 742
13 TraesCS4A01G409800 chr2A 640273270 640273973 703 False 614 614 82.8930 58 755 1 chr2A.!!$F1 697
14 TraesCS4A01G409800 chr7B 608864081 608864596 515 True 361 361 79.6610 289 811 1 chr7B.!!$R1 522
15 TraesCS4A01G409800 chr5A 142750760 142751528 768 True 302 302 74.0690 1421 2189 1 chr5A.!!$R1 768

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
930 975 0.029567 CATCGACCTAGTGCCGAGAC 59.970 60.0 0.00 0.0 35.7 3.36 F
1154 1253 0.106708 ACCGCCGATTATGCATCACT 59.893 50.0 0.19 0.0 0.0 3.41 F
2325 2432 0.321653 GGGAGCTCACCGACATTGTT 60.322 55.0 17.19 0.0 0.0 2.83 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2370 2477 0.035630 GCAGCTCCAACTGGACATCT 60.036 55.0 0.00 0.00 39.78 2.90 R
2506 2617 0.318699 TGACACTCCTTCGTCGCAAG 60.319 55.0 0.00 0.00 34.78 4.01 R
3684 3890 0.111704 GTATACAGTTGATGCGCGCG 60.112 55.0 28.44 28.44 0.00 6.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 3.619233 TGCCTTAAAAGCAACGTTCTC 57.381 42.857 0.00 0.00 37.28 2.87
22 23 3.211045 TGCCTTAAAAGCAACGTTCTCT 58.789 40.909 0.00 0.00 37.28 3.10
23 24 3.250040 TGCCTTAAAAGCAACGTTCTCTC 59.750 43.478 0.00 0.00 37.28 3.20
24 25 3.664537 GCCTTAAAAGCAACGTTCTCTCG 60.665 47.826 0.00 0.00 0.00 4.04
25 26 3.493503 CCTTAAAAGCAACGTTCTCTCGT 59.506 43.478 0.00 0.00 46.19 4.18
26 27 4.682860 CCTTAAAAGCAACGTTCTCTCGTA 59.317 41.667 0.00 0.00 43.38 3.43
27 28 5.176223 CCTTAAAAGCAACGTTCTCTCGTAA 59.824 40.000 0.00 1.05 43.38 3.18
28 29 4.448363 AAAAGCAACGTTCTCTCGTAAC 57.552 40.909 0.00 0.00 43.38 2.50
29 30 2.787601 AGCAACGTTCTCTCGTAACA 57.212 45.000 0.00 0.00 43.38 2.41
30 31 3.088194 AGCAACGTTCTCTCGTAACAA 57.912 42.857 0.00 0.00 43.38 2.83
31 32 3.050619 AGCAACGTTCTCTCGTAACAAG 58.949 45.455 0.00 0.00 43.38 3.16
32 33 3.047796 GCAACGTTCTCTCGTAACAAGA 58.952 45.455 0.00 0.00 43.38 3.02
33 34 3.488310 GCAACGTTCTCTCGTAACAAGAA 59.512 43.478 0.00 0.00 43.38 2.52
34 35 4.026310 GCAACGTTCTCTCGTAACAAGAAA 60.026 41.667 0.00 0.00 43.38 2.52
35 36 5.501252 GCAACGTTCTCTCGTAACAAGAAAA 60.501 40.000 0.00 0.00 43.38 2.29
36 37 6.471839 CAACGTTCTCTCGTAACAAGAAAAA 58.528 36.000 0.00 0.00 43.38 1.94
37 38 6.270096 ACGTTCTCTCGTAACAAGAAAAAG 57.730 37.500 0.00 0.00 42.35 2.27
38 39 6.038356 ACGTTCTCTCGTAACAAGAAAAAGA 58.962 36.000 0.00 0.00 42.35 2.52
39 40 6.198591 ACGTTCTCTCGTAACAAGAAAAAGAG 59.801 38.462 0.00 0.00 42.35 2.85
40 41 6.345882 CGTTCTCTCGTAACAAGAAAAAGAGG 60.346 42.308 0.00 0.00 31.26 3.69
41 42 6.401047 TCTCTCGTAACAAGAAAAAGAGGA 57.599 37.500 0.00 0.00 31.78 3.71
42 43 6.448006 TCTCTCGTAACAAGAAAAAGAGGAG 58.552 40.000 0.00 0.00 31.78 3.69
43 44 5.539048 TCTCGTAACAAGAAAAAGAGGAGG 58.461 41.667 0.00 0.00 0.00 4.30
44 45 5.303589 TCTCGTAACAAGAAAAAGAGGAGGA 59.696 40.000 0.00 0.00 0.00 3.71
45 46 5.539048 TCGTAACAAGAAAAAGAGGAGGAG 58.461 41.667 0.00 0.00 0.00 3.69
46 47 4.152580 CGTAACAAGAAAAAGAGGAGGAGC 59.847 45.833 0.00 0.00 0.00 4.70
47 48 4.445557 AACAAGAAAAAGAGGAGGAGCT 57.554 40.909 0.00 0.00 0.00 4.09
48 49 4.014569 ACAAGAAAAAGAGGAGGAGCTC 57.985 45.455 4.71 4.71 0.00 4.09
49 50 3.650461 ACAAGAAAAAGAGGAGGAGCTCT 59.350 43.478 14.64 0.00 0.00 4.09
50 51 4.252878 CAAGAAAAAGAGGAGGAGCTCTC 58.747 47.826 14.64 9.01 41.71 3.20
51 52 3.790126 AGAAAAAGAGGAGGAGCTCTCT 58.210 45.455 14.64 9.10 42.10 3.10
52 53 3.769300 AGAAAAAGAGGAGGAGCTCTCTC 59.231 47.826 14.64 17.13 42.10 3.20
213 217 8.179509 TCCCTTATATTCTACTACTCTTGTGC 57.820 38.462 0.00 0.00 0.00 4.57
631 659 7.279615 TCTATGTGGGTTTCAAATATCGTCAT 58.720 34.615 0.00 0.00 0.00 3.06
752 793 1.839994 ACATCTGACATGGTGGGGTAG 59.160 52.381 0.00 0.00 0.00 3.18
753 794 2.118679 CATCTGACATGGTGGGGTAGA 58.881 52.381 0.00 0.00 0.00 2.59
754 795 2.568546 TCTGACATGGTGGGGTAGAT 57.431 50.000 0.00 0.00 0.00 1.98
802 843 3.075148 TGGTAGATAATCCGCTCTCGAG 58.925 50.000 5.93 5.93 38.10 4.04
846 887 1.002900 TGCACGCAAGCAAGAAACTAC 60.003 47.619 0.00 0.00 42.46 2.73
851 892 1.871039 GCAAGCAAGAAACTACCACGA 59.129 47.619 0.00 0.00 0.00 4.35
856 897 3.997021 AGCAAGAAACTACCACGATTCAG 59.003 43.478 0.00 0.00 0.00 3.02
862 903 3.895232 ACTACCACGATTCAGAATGCT 57.105 42.857 0.00 0.00 34.76 3.79
898 943 5.698089 GCTGAACTGCATAATATCACTGCTA 59.302 40.000 0.00 0.00 36.84 3.49
917 962 9.457110 CACTGCTATCCTATAAATATCATCGAC 57.543 37.037 0.00 0.00 0.00 4.20
930 975 0.029567 CATCGACCTAGTGCCGAGAC 59.970 60.000 0.00 0.00 35.70 3.36
944 989 2.512745 AGACGCAACGCACACCAA 60.513 55.556 0.00 0.00 0.00 3.67
955 1000 3.560251 ACACCAAGCTCGGCCAGT 61.560 61.111 2.24 0.00 0.00 4.00
959 1004 3.730761 CAAGCTCGGCCAGTGCAC 61.731 66.667 9.40 9.40 41.47 4.57
965 1010 4.015406 CGGCCAGTGCACCCAGTA 62.015 66.667 14.63 0.00 40.13 2.74
966 1011 2.359975 GGCCAGTGCACCCAGTAC 60.360 66.667 14.63 0.00 40.13 2.73
967 1012 2.742372 GCCAGTGCACCCAGTACG 60.742 66.667 14.63 0.00 37.96 3.67
969 1014 2.343758 CAGTGCACCCAGTACGCT 59.656 61.111 14.63 0.00 37.96 5.07
970 1015 1.589630 CAGTGCACCCAGTACGCTA 59.410 57.895 14.63 0.00 37.96 4.26
1146 1227 2.587753 CGCACCACCGCCGATTAT 60.588 61.111 0.00 0.00 0.00 1.28
1150 1249 1.148273 ACCACCGCCGATTATGCAT 59.852 52.632 3.79 3.79 0.00 3.96
1154 1253 0.106708 ACCGCCGATTATGCATCACT 59.893 50.000 0.19 0.00 0.00 3.41
1324 1423 2.427245 ATCACGGGCCTTCTCCTCG 61.427 63.158 0.84 0.00 0.00 4.63
1702 1801 0.864797 CGTACGCCGCTTCTTCTACC 60.865 60.000 0.52 0.00 0.00 3.18
2023 2122 1.482182 TGCTACAAGTCATCGGCATCT 59.518 47.619 0.00 0.00 0.00 2.90
2026 2125 1.198713 ACAAGTCATCGGCATCTCCT 58.801 50.000 0.00 0.00 0.00 3.69
2106 2205 2.169352 CGGTCTCTCCATCCTCAACAAT 59.831 50.000 0.00 0.00 35.57 2.71
2325 2432 0.321653 GGGAGCTCACCGACATTGTT 60.322 55.000 17.19 0.00 0.00 2.83
2451 2562 1.704070 GATGAGGCCAGGGAGATCATT 59.296 52.381 5.01 0.00 30.98 2.57
2481 2592 1.226688 GAGCGTGATCAGCGTGCTA 60.227 57.895 15.67 0.00 40.04 3.49
2499 2610 0.613260 TAGTCGCCATGTTCTTGCCT 59.387 50.000 0.00 0.00 0.00 4.75
2669 2783 2.202892 GAAGGACCCCATCGTCGC 60.203 66.667 0.00 0.00 33.30 5.19
2797 2911 0.607489 CACAGTGGAGAAGGCCAAGG 60.607 60.000 5.01 0.00 40.20 3.61
2846 2960 0.465705 CAGATGCTCCCGTACATGGT 59.534 55.000 0.00 0.00 0.00 3.55
3209 3323 4.014406 CGGAATTAAGCCCTAAAACCACT 58.986 43.478 0.00 0.00 0.00 4.00
3210 3324 5.187687 CGGAATTAAGCCCTAAAACCACTA 58.812 41.667 0.00 0.00 0.00 2.74
3211 3325 5.826208 CGGAATTAAGCCCTAAAACCACTAT 59.174 40.000 0.00 0.00 0.00 2.12
3212 3326 6.993902 CGGAATTAAGCCCTAAAACCACTATA 59.006 38.462 0.00 0.00 0.00 1.31
3272 3409 9.807649 ATTTGTCTTTCTATTGCATTATGGTTC 57.192 29.630 0.00 0.00 0.00 3.62
3283 3420 8.850454 ATTGCATTATGGTTCGTTATGTTAAC 57.150 30.769 0.00 0.00 0.00 2.01
3383 3520 9.917129 CTACATAATTCCGTGGTATGTTATGTA 57.083 33.333 12.47 12.47 40.86 2.29
3457 3663 9.739276 AATCTTAACATGTTAGAACTGGATGAA 57.261 29.630 17.36 0.72 0.00 2.57
3458 3664 9.911788 ATCTTAACATGTTAGAACTGGATGAAT 57.088 29.630 17.36 0.00 0.00 2.57
3471 3677 9.520515 AGAACTGGATGAATAATTTAACACAGT 57.479 29.630 0.00 0.00 37.07 3.55
3472 3678 9.774742 GAACTGGATGAATAATTTAACACAGTC 57.225 33.333 0.00 0.00 34.71 3.51
3473 3679 9.520515 AACTGGATGAATAATTTAACACAGTCT 57.479 29.630 0.00 0.00 34.71 3.24
3474 3680 9.520515 ACTGGATGAATAATTTAACACAGTCTT 57.479 29.630 0.00 0.00 30.42 3.01
3527 3733 7.651808 ACATTTAGATGTGCCATAAGTATTGC 58.348 34.615 0.00 0.00 44.64 3.56
3528 3734 7.285172 ACATTTAGATGTGCCATAAGTATTGCA 59.715 33.333 0.00 0.00 44.64 4.08
3536 3742 6.866010 TGCCATAAGTATTGCACATCTAAG 57.134 37.500 0.00 0.00 30.49 2.18
3537 3743 6.356556 TGCCATAAGTATTGCACATCTAAGT 58.643 36.000 0.00 0.00 30.49 2.24
3538 3744 6.483307 TGCCATAAGTATTGCACATCTAAGTC 59.517 38.462 0.00 0.00 30.49 3.01
3539 3745 6.483307 GCCATAAGTATTGCACATCTAAGTCA 59.517 38.462 0.00 0.00 0.00 3.41
3540 3746 7.173907 GCCATAAGTATTGCACATCTAAGTCAT 59.826 37.037 0.00 0.00 0.00 3.06
3541 3747 9.710900 CCATAAGTATTGCACATCTAAGTCATA 57.289 33.333 0.00 0.00 0.00 2.15
3545 3751 8.824159 AGTATTGCACATCTAAGTCATATGTC 57.176 34.615 1.90 0.00 31.60 3.06
3546 3752 8.424133 AGTATTGCACATCTAAGTCATATGTCA 58.576 33.333 1.90 0.00 31.60 3.58
3547 3753 9.212641 GTATTGCACATCTAAGTCATATGTCAT 57.787 33.333 1.90 0.00 31.60 3.06
3548 3754 8.687292 ATTGCACATCTAAGTCATATGTCATT 57.313 30.769 1.90 0.00 31.60 2.57
3549 3755 7.486802 TGCACATCTAAGTCATATGTCATTG 57.513 36.000 1.90 0.00 31.60 2.82
3550 3756 7.274447 TGCACATCTAAGTCATATGTCATTGA 58.726 34.615 1.90 0.00 31.60 2.57
3551 3757 7.935210 TGCACATCTAAGTCATATGTCATTGAT 59.065 33.333 1.90 0.00 31.60 2.57
3552 3758 8.781196 GCACATCTAAGTCATATGTCATTGATT 58.219 33.333 1.90 0.00 31.60 2.57
3563 3769 9.904198 TCATATGTCATTGATTTAAACTCTCCA 57.096 29.630 1.90 0.00 0.00 3.86
3566 3772 8.641498 ATGTCATTGATTTAAACTCTCCAACT 57.359 30.769 0.00 0.00 0.00 3.16
3567 3773 8.099364 TGTCATTGATTTAAACTCTCCAACTC 57.901 34.615 0.00 0.00 0.00 3.01
3568 3774 7.174946 TGTCATTGATTTAAACTCTCCAACTCC 59.825 37.037 0.00 0.00 0.00 3.85
3569 3775 7.391833 GTCATTGATTTAAACTCTCCAACTCCT 59.608 37.037 0.00 0.00 0.00 3.69
3570 3776 7.944554 TCATTGATTTAAACTCTCCAACTCCTT 59.055 33.333 0.00 0.00 0.00 3.36
3571 3777 8.579863 CATTGATTTAAACTCTCCAACTCCTTT 58.420 33.333 0.00 0.00 0.00 3.11
3572 3778 9.807921 ATTGATTTAAACTCTCCAACTCCTTTA 57.192 29.630 0.00 0.00 0.00 1.85
3573 3779 9.807921 TTGATTTAAACTCTCCAACTCCTTTAT 57.192 29.630 0.00 0.00 0.00 1.40
3574 3780 9.807921 TGATTTAAACTCTCCAACTCCTTTATT 57.192 29.630 0.00 0.00 0.00 1.40
3580 3786 9.807921 AAACTCTCCAACTCCTTTATTTATTCA 57.192 29.630 0.00 0.00 0.00 2.57
3581 3787 9.981460 AACTCTCCAACTCCTTTATTTATTCAT 57.019 29.630 0.00 0.00 0.00 2.57
3582 3788 9.981460 ACTCTCCAACTCCTTTATTTATTCATT 57.019 29.630 0.00 0.00 0.00 2.57
3584 3790 9.973661 TCTCCAACTCCTTTATTTATTCATTGA 57.026 29.630 0.00 0.00 0.00 2.57
3601 3807 8.961294 ATTCATTGAAAACCAACAAAGAATCA 57.039 26.923 2.68 0.00 38.89 2.57
3602 3808 8.783833 TTCATTGAAAACCAACAAAGAATCAA 57.216 26.923 0.00 0.00 37.63 2.57
3603 3809 8.961294 TCATTGAAAACCAACAAAGAATCAAT 57.039 26.923 0.00 0.00 37.63 2.57
3604 3810 9.393512 TCATTGAAAACCAACAAAGAATCAATT 57.606 25.926 0.00 0.00 37.63 2.32
3613 3819 9.912634 ACCAACAAAGAATCAATTATACACAAG 57.087 29.630 0.00 0.00 0.00 3.16
3614 3820 9.912634 CCAACAAAGAATCAATTATACACAAGT 57.087 29.630 0.00 0.00 0.00 3.16
3627 3833 9.838339 AATTATACACAAGTAAAGAGGAGATGG 57.162 33.333 0.00 0.00 33.13 3.51
3628 3834 3.944087 ACACAAGTAAAGAGGAGATGGC 58.056 45.455 0.00 0.00 0.00 4.40
3629 3835 3.327757 ACACAAGTAAAGAGGAGATGGCA 59.672 43.478 0.00 0.00 0.00 4.92
3630 3836 3.937706 CACAAGTAAAGAGGAGATGGCAG 59.062 47.826 0.00 0.00 0.00 4.85
3631 3837 3.840666 ACAAGTAAAGAGGAGATGGCAGA 59.159 43.478 0.00 0.00 0.00 4.26
3632 3838 4.187694 CAAGTAAAGAGGAGATGGCAGAC 58.812 47.826 0.00 0.00 0.00 3.51
3633 3839 3.718723 AGTAAAGAGGAGATGGCAGACT 58.281 45.455 0.00 0.00 0.00 3.24
3634 3840 3.450457 AGTAAAGAGGAGATGGCAGACTG 59.550 47.826 0.00 0.00 0.00 3.51
3635 3841 1.202330 AAGAGGAGATGGCAGACTGG 58.798 55.000 4.26 0.00 0.00 4.00
3636 3842 1.145819 GAGGAGATGGCAGACTGGC 59.854 63.158 21.54 21.54 44.03 4.85
3643 3849 2.586792 GGCAGACTGGCAGTAGGG 59.413 66.667 22.11 13.77 43.14 3.53
3644 3850 2.586792 GCAGACTGGCAGTAGGGG 59.413 66.667 22.11 11.21 0.00 4.79
3645 3851 2.586792 CAGACTGGCAGTAGGGGC 59.413 66.667 22.11 7.71 0.00 5.80
3657 3863 4.274978 GCAGTAGGGGCCAAATAACTTAA 58.725 43.478 4.39 0.00 0.00 1.85
3662 3868 4.484912 AGGGGCCAAATAACTTAACACAA 58.515 39.130 4.39 0.00 0.00 3.33
3665 3871 5.641636 GGGGCCAAATAACTTAACACAATTG 59.358 40.000 4.39 3.24 0.00 2.32
3671 3877 8.531146 CCAAATAACTTAACACAATTGGGAGAT 58.469 33.333 16.31 2.63 33.98 2.75
3697 3903 4.134187 CGAACGCGCGCATCAACT 62.134 61.111 32.58 5.07 0.00 3.16
3710 3916 4.142902 GCGCATCAACTGTATACAAACTGT 60.143 41.667 7.06 0.00 33.50 3.55
3730 3936 2.512485 TGCATTCCACAAAGTTGCTG 57.488 45.000 0.00 0.00 34.47 4.41
3761 3967 4.044426 GCTCCGAATGCATTAATTGGAAC 58.956 43.478 12.97 9.13 0.00 3.62
3762 3968 4.439974 GCTCCGAATGCATTAATTGGAACA 60.440 41.667 12.97 0.00 0.00 3.18
3763 3969 5.247507 TCCGAATGCATTAATTGGAACAG 57.752 39.130 12.97 0.00 42.39 3.16
3764 3970 4.704540 TCCGAATGCATTAATTGGAACAGT 59.295 37.500 12.97 0.00 42.39 3.55
3765 3971 5.184864 TCCGAATGCATTAATTGGAACAGTT 59.815 36.000 12.97 0.00 42.39 3.16
3766 3972 5.868801 CCGAATGCATTAATTGGAACAGTTT 59.131 36.000 12.97 0.00 42.39 2.66
3767 3973 6.368516 CCGAATGCATTAATTGGAACAGTTTT 59.631 34.615 12.97 0.00 42.39 2.43
3768 3974 7.228840 CGAATGCATTAATTGGAACAGTTTTG 58.771 34.615 12.97 0.00 42.39 2.44
3769 3975 5.921004 TGCATTAATTGGAACAGTTTTGC 57.079 34.783 0.00 0.00 42.09 3.68
3770 3976 5.609423 TGCATTAATTGGAACAGTTTTGCT 58.391 33.333 10.80 0.00 42.17 3.91
3771 3977 6.753180 TGCATTAATTGGAACAGTTTTGCTA 58.247 32.000 10.80 0.00 42.17 3.49
3772 3978 7.212976 TGCATTAATTGGAACAGTTTTGCTAA 58.787 30.769 10.80 0.00 42.17 3.09
3773 3979 7.384660 TGCATTAATTGGAACAGTTTTGCTAAG 59.615 33.333 10.80 0.00 42.17 2.18
3774 3980 7.384932 GCATTAATTGGAACAGTTTTGCTAAGT 59.615 33.333 0.00 0.00 40.25 2.24
3775 3981 8.915654 CATTAATTGGAACAGTTTTGCTAAGTC 58.084 33.333 0.00 0.00 42.39 3.01
3776 3982 6.715347 AATTGGAACAGTTTTGCTAAGTCT 57.285 33.333 0.00 0.00 42.39 3.24
3777 3983 5.751243 TTGGAACAGTTTTGCTAAGTCTC 57.249 39.130 0.00 0.00 42.39 3.36
3778 3984 4.776349 TGGAACAGTTTTGCTAAGTCTCA 58.224 39.130 0.00 0.00 0.00 3.27
3779 3985 4.816385 TGGAACAGTTTTGCTAAGTCTCAG 59.184 41.667 0.00 0.00 0.00 3.35
3780 3986 4.816925 GGAACAGTTTTGCTAAGTCTCAGT 59.183 41.667 0.00 0.00 0.00 3.41
3781 3987 5.050023 GGAACAGTTTTGCTAAGTCTCAGTC 60.050 44.000 0.00 0.00 0.00 3.51
3782 3988 4.051922 ACAGTTTTGCTAAGTCTCAGTCG 58.948 43.478 0.00 0.00 0.00 4.18
3783 3989 4.202121 ACAGTTTTGCTAAGTCTCAGTCGA 60.202 41.667 0.00 0.00 0.00 4.20
3784 3990 4.149046 CAGTTTTGCTAAGTCTCAGTCGAC 59.851 45.833 7.70 7.70 0.00 4.20
3785 3991 2.613730 TTGCTAAGTCTCAGTCGACG 57.386 50.000 10.46 5.48 38.90 5.12
3786 3992 1.520494 TGCTAAGTCTCAGTCGACGT 58.480 50.000 10.46 0.00 38.90 4.34
3787 3993 1.463831 TGCTAAGTCTCAGTCGACGTC 59.536 52.381 10.46 5.18 38.90 4.34
3788 3994 1.733360 GCTAAGTCTCAGTCGACGTCT 59.267 52.381 14.70 2.80 38.90 4.18
3789 3995 2.928757 GCTAAGTCTCAGTCGACGTCTA 59.071 50.000 14.70 0.00 38.90 2.59
3790 3996 3.242059 GCTAAGTCTCAGTCGACGTCTAC 60.242 52.174 14.70 13.29 38.90 2.59
3791 3997 2.747396 AGTCTCAGTCGACGTCTACT 57.253 50.000 16.36 16.36 38.90 2.57
3792 3998 3.042871 AGTCTCAGTCGACGTCTACTT 57.957 47.619 19.16 2.96 38.90 2.24
3793 3999 2.995258 AGTCTCAGTCGACGTCTACTTC 59.005 50.000 19.16 10.52 38.90 3.01
3794 4000 1.991264 TCTCAGTCGACGTCTACTTCG 59.009 52.381 19.16 13.05 38.72 3.79
3795 4001 1.725706 CTCAGTCGACGTCTACTTCGT 59.274 52.381 19.16 0.00 44.27 3.85
3796 4002 2.138320 TCAGTCGACGTCTACTTCGTT 58.862 47.619 19.16 0.00 41.64 3.85
3797 4003 3.317150 TCAGTCGACGTCTACTTCGTTA 58.683 45.455 19.16 1.78 41.64 3.18
3798 4004 3.928992 TCAGTCGACGTCTACTTCGTTAT 59.071 43.478 19.16 0.00 41.64 1.89
3799 4005 4.020518 CAGTCGACGTCTACTTCGTTATG 58.979 47.826 19.16 4.72 41.64 1.90
3800 4006 3.681897 AGTCGACGTCTACTTCGTTATGT 59.318 43.478 16.36 0.00 41.64 2.29
3801 4007 4.018567 GTCGACGTCTACTTCGTTATGTC 58.981 47.826 14.70 0.00 41.64 3.06
3802 4008 3.928992 TCGACGTCTACTTCGTTATGTCT 59.071 43.478 14.70 0.00 41.64 3.41
3803 4009 4.032217 TCGACGTCTACTTCGTTATGTCTC 59.968 45.833 14.70 0.00 41.64 3.36
3804 4010 4.201656 CGACGTCTACTTCGTTATGTCTCA 60.202 45.833 14.70 0.00 41.64 3.27
3805 4011 5.219226 ACGTCTACTTCGTTATGTCTCAG 57.781 43.478 0.00 0.00 38.38 3.35
3806 4012 4.694509 ACGTCTACTTCGTTATGTCTCAGT 59.305 41.667 0.00 0.00 38.38 3.41
3807 4013 5.163874 ACGTCTACTTCGTTATGTCTCAGTC 60.164 44.000 0.00 0.00 38.38 3.51
3808 4014 5.257108 GTCTACTTCGTTATGTCTCAGTCG 58.743 45.833 0.00 0.00 0.00 4.18
3809 4015 5.063186 GTCTACTTCGTTATGTCTCAGTCGA 59.937 44.000 0.00 0.00 0.00 4.20
3810 4016 4.966965 ACTTCGTTATGTCTCAGTCGAT 57.033 40.909 0.00 0.00 0.00 3.59
3811 4017 4.663166 ACTTCGTTATGTCTCAGTCGATG 58.337 43.478 0.00 0.00 0.00 3.84
3812 4018 4.156190 ACTTCGTTATGTCTCAGTCGATGT 59.844 41.667 0.00 0.00 33.39 3.06
3813 4019 4.696899 TCGTTATGTCTCAGTCGATGTT 57.303 40.909 0.00 0.00 0.00 2.71
3814 4020 5.806366 TCGTTATGTCTCAGTCGATGTTA 57.194 39.130 0.00 0.00 0.00 2.41
3815 4021 6.373186 TCGTTATGTCTCAGTCGATGTTAT 57.627 37.500 0.00 0.00 0.00 1.89
3816 4022 7.486802 TCGTTATGTCTCAGTCGATGTTATA 57.513 36.000 0.00 0.00 0.00 0.98
3817 4023 8.095937 TCGTTATGTCTCAGTCGATGTTATAT 57.904 34.615 0.00 0.00 0.00 0.86
3818 4024 8.565416 TCGTTATGTCTCAGTCGATGTTATATT 58.435 33.333 0.00 0.00 0.00 1.28
3819 4025 9.181805 CGTTATGTCTCAGTCGATGTTATATTT 57.818 33.333 0.00 0.00 0.00 1.40
3823 4029 9.770097 ATGTCTCAGTCGATGTTATATTTCATT 57.230 29.630 0.00 0.00 0.00 2.57
3824 4030 9.034544 TGTCTCAGTCGATGTTATATTTCATTG 57.965 33.333 0.00 0.00 0.00 2.82
3825 4031 9.249457 GTCTCAGTCGATGTTATATTTCATTGA 57.751 33.333 0.00 5.96 33.63 2.57
3826 4032 9.987272 TCTCAGTCGATGTTATATTTCATTGAT 57.013 29.630 10.75 2.37 37.00 2.57
3828 4034 9.987272 TCAGTCGATGTTATATTTCATTGATCT 57.013 29.630 10.75 8.36 37.00 2.75
3831 4037 9.322776 GTCGATGTTATATTTCATTGATCTTGC 57.677 33.333 10.75 0.00 37.00 4.01
3832 4038 9.054922 TCGATGTTATATTTCATTGATCTTGCA 57.945 29.630 0.00 0.00 31.83 4.08
3833 4039 9.836076 CGATGTTATATTTCATTGATCTTGCAT 57.164 29.630 0.00 0.00 0.00 3.96
3898 4104 7.615403 TCTTCTCATATACCATATCACTTGGC 58.385 38.462 0.00 0.00 37.81 4.52
3899 4105 7.455953 TCTTCTCATATACCATATCACTTGGCT 59.544 37.037 0.00 0.00 37.81 4.75
3900 4106 6.939622 TCTCATATACCATATCACTTGGCTG 58.060 40.000 0.00 0.00 37.81 4.85
3901 4107 6.725834 TCTCATATACCATATCACTTGGCTGA 59.274 38.462 0.00 0.00 37.81 4.26
3902 4108 6.939622 TCATATACCATATCACTTGGCTGAG 58.060 40.000 0.00 0.00 37.81 3.35
3903 4109 6.725834 TCATATACCATATCACTTGGCTGAGA 59.274 38.462 0.00 0.00 37.81 3.27
3904 4110 3.550437 ACCATATCACTTGGCTGAGAC 57.450 47.619 0.00 0.00 37.81 3.36
3905 4111 3.110705 ACCATATCACTTGGCTGAGACT 58.889 45.455 0.00 0.00 37.81 3.24
3906 4112 3.521126 ACCATATCACTTGGCTGAGACTT 59.479 43.478 0.00 0.00 37.81 3.01
3907 4113 3.875727 CCATATCACTTGGCTGAGACTTG 59.124 47.826 0.00 0.00 0.00 3.16
3908 4114 2.486472 ATCACTTGGCTGAGACTTGG 57.514 50.000 0.00 0.00 0.00 3.61
3909 4115 1.131638 TCACTTGGCTGAGACTTGGT 58.868 50.000 0.00 0.00 0.00 3.67
3910 4116 1.490490 TCACTTGGCTGAGACTTGGTT 59.510 47.619 0.00 0.00 0.00 3.67
3911 4117 2.703536 TCACTTGGCTGAGACTTGGTTA 59.296 45.455 0.00 0.00 0.00 2.85
3912 4118 3.135712 TCACTTGGCTGAGACTTGGTTAA 59.864 43.478 0.00 0.00 0.00 2.01
3913 4119 3.499918 CACTTGGCTGAGACTTGGTTAAG 59.500 47.826 0.00 0.00 39.86 1.85
3924 4130 4.240175 ACTTGGTTAAGTCTCAGTCGAC 57.760 45.455 7.70 7.70 43.53 4.20
3925 4131 3.005578 ACTTGGTTAAGTCTCAGTCGACC 59.994 47.826 13.01 0.00 43.53 4.79
3926 4132 2.589720 TGGTTAAGTCTCAGTCGACCA 58.410 47.619 13.01 0.00 34.46 4.02
3927 4133 2.960384 TGGTTAAGTCTCAGTCGACCAA 59.040 45.455 13.01 0.00 33.15 3.67
3928 4134 3.005472 TGGTTAAGTCTCAGTCGACCAAG 59.995 47.826 13.01 10.19 33.15 3.61
3929 4135 3.255149 GGTTAAGTCTCAGTCGACCAAGA 59.745 47.826 13.01 12.52 34.46 3.02
3930 4136 4.228317 GTTAAGTCTCAGTCGACCAAGAC 58.772 47.826 27.95 27.95 41.23 3.01
3931 4137 1.249407 AGTCTCAGTCGACCAAGACC 58.751 55.000 29.90 18.90 41.83 3.85
3932 4138 1.202952 AGTCTCAGTCGACCAAGACCT 60.203 52.381 29.90 20.19 41.83 3.85
3933 4139 2.040012 AGTCTCAGTCGACCAAGACCTA 59.960 50.000 29.90 6.95 41.83 3.08
3934 4140 2.420722 GTCTCAGTCGACCAAGACCTAG 59.579 54.545 26.20 9.54 41.83 3.02
3935 4141 2.305052 TCTCAGTCGACCAAGACCTAGA 59.695 50.000 13.01 1.15 41.83 2.43
3936 4142 2.420722 CTCAGTCGACCAAGACCTAGAC 59.579 54.545 13.01 0.00 41.83 2.59
3937 4143 2.160205 CAGTCGACCAAGACCTAGACA 58.840 52.381 13.01 0.00 41.83 3.41
3938 4144 2.095161 CAGTCGACCAAGACCTAGACAC 60.095 54.545 13.01 0.00 41.83 3.67
3939 4145 1.884579 GTCGACCAAGACCTAGACACA 59.115 52.381 3.51 0.00 35.22 3.72
3940 4146 2.492484 GTCGACCAAGACCTAGACACAT 59.508 50.000 3.51 0.00 35.22 3.21
3941 4147 2.753452 TCGACCAAGACCTAGACACATC 59.247 50.000 0.00 0.00 0.00 3.06
3942 4148 2.159226 CGACCAAGACCTAGACACATCC 60.159 54.545 0.00 0.00 0.00 3.51
3943 4149 3.100671 GACCAAGACCTAGACACATCCT 58.899 50.000 0.00 0.00 0.00 3.24
3944 4150 2.834549 ACCAAGACCTAGACACATCCTG 59.165 50.000 0.00 0.00 0.00 3.86
3945 4151 2.169352 CCAAGACCTAGACACATCCTGG 59.831 54.545 0.00 0.00 0.00 4.45
3946 4152 3.099905 CAAGACCTAGACACATCCTGGA 58.900 50.000 0.00 0.00 0.00 3.86
3947 4153 3.474798 AGACCTAGACACATCCTGGAA 57.525 47.619 0.00 0.00 0.00 3.53
3948 4154 4.000928 AGACCTAGACACATCCTGGAAT 57.999 45.455 0.00 0.00 0.00 3.01
3949 4155 4.366267 AGACCTAGACACATCCTGGAATT 58.634 43.478 0.00 0.00 0.00 2.17
3950 4156 4.163078 AGACCTAGACACATCCTGGAATTG 59.837 45.833 0.00 3.27 0.00 2.32
3951 4157 3.200825 ACCTAGACACATCCTGGAATTGG 59.799 47.826 0.00 0.00 0.00 3.16
3952 4158 2.134789 AGACACATCCTGGAATTGGC 57.865 50.000 0.00 2.74 0.00 4.52
3953 4159 1.637553 AGACACATCCTGGAATTGGCT 59.362 47.619 9.87 9.87 0.00 4.75
3954 4160 2.042162 AGACACATCCTGGAATTGGCTT 59.958 45.455 9.87 0.00 0.00 4.35
3955 4161 2.165030 GACACATCCTGGAATTGGCTTG 59.835 50.000 0.00 0.00 0.00 4.01
3956 4162 2.225091 ACACATCCTGGAATTGGCTTGA 60.225 45.455 0.00 0.00 0.00 3.02
3957 4163 2.827322 CACATCCTGGAATTGGCTTGAA 59.173 45.455 0.00 0.00 0.00 2.69
3958 4164 2.827921 ACATCCTGGAATTGGCTTGAAC 59.172 45.455 0.00 0.00 0.00 3.18
3959 4165 2.673775 TCCTGGAATTGGCTTGAACA 57.326 45.000 0.00 0.00 0.00 3.18
3960 4166 2.238521 TCCTGGAATTGGCTTGAACAC 58.761 47.619 0.00 0.00 0.00 3.32
3961 4167 2.158475 TCCTGGAATTGGCTTGAACACT 60.158 45.455 0.00 0.00 0.00 3.55
3962 4168 2.229784 CCTGGAATTGGCTTGAACACTC 59.770 50.000 0.00 0.00 0.00 3.51
3963 4169 3.152341 CTGGAATTGGCTTGAACACTCT 58.848 45.455 0.00 0.00 0.00 3.24
3964 4170 2.886523 TGGAATTGGCTTGAACACTCTG 59.113 45.455 0.00 0.00 0.00 3.35
3965 4171 3.149196 GGAATTGGCTTGAACACTCTGA 58.851 45.455 0.00 0.00 0.00 3.27
3966 4172 3.057946 GGAATTGGCTTGAACACTCTGAC 60.058 47.826 0.00 0.00 0.00 3.51
3967 4173 1.967319 TTGGCTTGAACACTCTGACC 58.033 50.000 0.00 0.00 0.00 4.02
3968 4174 0.836606 TGGCTTGAACACTCTGACCA 59.163 50.000 0.00 0.00 0.00 4.02
3969 4175 1.202687 TGGCTTGAACACTCTGACCAG 60.203 52.381 0.00 0.00 0.00 4.00
3970 4176 1.070758 GGCTTGAACACTCTGACCAGA 59.929 52.381 0.00 0.00 35.85 3.86
3971 4177 2.289945 GGCTTGAACACTCTGACCAGAT 60.290 50.000 0.00 0.00 36.76 2.90
3972 4178 2.999355 GCTTGAACACTCTGACCAGATC 59.001 50.000 0.00 0.00 36.76 2.75
3973 4179 3.594134 CTTGAACACTCTGACCAGATCC 58.406 50.000 0.00 0.00 36.76 3.36
3974 4180 2.894731 TGAACACTCTGACCAGATCCT 58.105 47.619 0.00 0.00 36.76 3.24
3975 4181 2.828520 TGAACACTCTGACCAGATCCTC 59.171 50.000 0.00 0.00 36.76 3.71
3976 4182 2.917713 ACACTCTGACCAGATCCTCT 57.082 50.000 0.00 0.00 36.76 3.69
3977 4183 2.733956 ACACTCTGACCAGATCCTCTC 58.266 52.381 0.00 0.00 36.76 3.20
3978 4184 2.311542 ACACTCTGACCAGATCCTCTCT 59.688 50.000 0.00 0.00 36.76 3.10
3989 4195 5.004922 CAGATCCTCTCTGTACTGAAACC 57.995 47.826 3.89 0.00 45.42 3.27
3990 4196 3.697045 AGATCCTCTCTGTACTGAAACCG 59.303 47.826 3.89 0.00 31.12 4.44
3991 4197 2.168496 TCCTCTCTGTACTGAAACCGG 58.832 52.381 0.00 0.00 0.00 5.28
3992 4198 1.893801 CCTCTCTGTACTGAAACCGGT 59.106 52.381 0.00 0.00 0.00 5.28
3993 4199 2.352814 CCTCTCTGTACTGAAACCGGTG 60.353 54.545 8.52 0.00 0.00 4.94
3994 4200 2.557056 CTCTCTGTACTGAAACCGGTGA 59.443 50.000 8.52 0.00 0.00 4.02
3995 4201 2.960384 TCTCTGTACTGAAACCGGTGAA 59.040 45.455 8.52 0.00 0.00 3.18
3996 4202 3.385433 TCTCTGTACTGAAACCGGTGAAA 59.615 43.478 8.52 0.00 0.00 2.69
3997 4203 4.124238 CTCTGTACTGAAACCGGTGAAAA 58.876 43.478 8.52 0.00 0.00 2.29
3998 4204 3.872771 TCTGTACTGAAACCGGTGAAAAC 59.127 43.478 8.52 2.78 0.00 2.43
3999 4205 2.944349 TGTACTGAAACCGGTGAAAACC 59.056 45.455 8.52 0.00 0.00 3.27
4000 4206 2.131776 ACTGAAACCGGTGAAAACCA 57.868 45.000 8.52 0.00 0.00 3.67
4001 4207 1.746787 ACTGAAACCGGTGAAAACCAC 59.253 47.619 8.52 0.00 44.95 4.16
4002 4208 0.733729 TGAAACCGGTGAAAACCACG 59.266 50.000 8.52 0.00 46.62 4.94
4003 4209 1.015868 GAAACCGGTGAAAACCACGA 58.984 50.000 8.52 0.00 46.62 4.35
4004 4210 1.003223 GAAACCGGTGAAAACCACGAG 60.003 52.381 8.52 0.00 46.62 4.18
4005 4211 0.178533 AACCGGTGAAAACCACGAGA 59.821 50.000 8.52 0.00 46.62 4.04
4006 4212 0.178533 ACCGGTGAAAACCACGAGAA 59.821 50.000 6.12 0.00 46.62 2.87
4007 4213 1.301423 CCGGTGAAAACCACGAGAAA 58.699 50.000 0.00 0.00 46.62 2.52
4008 4214 1.671845 CCGGTGAAAACCACGAGAAAA 59.328 47.619 0.00 0.00 46.62 2.29
4009 4215 2.097791 CCGGTGAAAACCACGAGAAAAA 59.902 45.455 0.00 0.00 46.62 1.94
4010 4216 3.359654 CGGTGAAAACCACGAGAAAAAG 58.640 45.455 0.00 0.00 46.62 2.27
4011 4217 3.064271 CGGTGAAAACCACGAGAAAAAGA 59.936 43.478 0.00 0.00 46.62 2.52
4012 4218 4.261031 CGGTGAAAACCACGAGAAAAAGAT 60.261 41.667 0.00 0.00 46.62 2.40
4013 4219 4.976116 GGTGAAAACCACGAGAAAAAGATG 59.024 41.667 0.00 0.00 46.62 2.90
4014 4220 5.449999 GGTGAAAACCACGAGAAAAAGATGT 60.450 40.000 0.00 0.00 46.62 3.06
4015 4221 6.033966 GTGAAAACCACGAGAAAAAGATGTT 58.966 36.000 0.00 0.00 35.86 2.71
4016 4222 6.530181 GTGAAAACCACGAGAAAAAGATGTTT 59.470 34.615 0.00 0.00 35.86 2.83
4017 4223 7.062956 GTGAAAACCACGAGAAAAAGATGTTTT 59.937 33.333 0.00 0.00 37.37 2.43
4018 4224 6.885735 AAACCACGAGAAAAAGATGTTTTG 57.114 33.333 0.71 0.00 35.96 2.44
4019 4225 5.828299 ACCACGAGAAAAAGATGTTTTGA 57.172 34.783 0.71 0.00 35.96 2.69
4020 4226 6.202516 ACCACGAGAAAAAGATGTTTTGAA 57.797 33.333 0.71 0.00 35.96 2.69
4021 4227 6.265577 ACCACGAGAAAAAGATGTTTTGAAG 58.734 36.000 0.71 0.00 35.96 3.02
4022 4228 6.127730 ACCACGAGAAAAAGATGTTTTGAAGT 60.128 34.615 0.71 0.00 35.96 3.01
4023 4229 6.751888 CCACGAGAAAAAGATGTTTTGAAGTT 59.248 34.615 0.71 0.00 35.96 2.66
4024 4230 7.275560 CCACGAGAAAAAGATGTTTTGAAGTTT 59.724 33.333 0.71 0.00 35.96 2.66
4025 4231 8.313931 CACGAGAAAAAGATGTTTTGAAGTTTC 58.686 33.333 0.71 0.00 35.96 2.78
4026 4232 8.026607 ACGAGAAAAAGATGTTTTGAAGTTTCA 58.973 29.630 0.71 0.00 35.96 2.69
4027 4233 8.859156 CGAGAAAAAGATGTTTTGAAGTTTCAA 58.141 29.630 0.71 3.28 44.78 2.69
4063 4269 6.780457 AAAATGTGGGATGTTAAGAGGATG 57.220 37.500 0.00 0.00 0.00 3.51
4064 4270 5.715439 AATGTGGGATGTTAAGAGGATGA 57.285 39.130 0.00 0.00 0.00 2.92
4065 4271 5.919348 ATGTGGGATGTTAAGAGGATGAT 57.081 39.130 0.00 0.00 0.00 2.45
4066 4272 5.039920 TGTGGGATGTTAAGAGGATGATG 57.960 43.478 0.00 0.00 0.00 3.07
4067 4273 4.474651 TGTGGGATGTTAAGAGGATGATGT 59.525 41.667 0.00 0.00 0.00 3.06
4068 4274 5.044919 TGTGGGATGTTAAGAGGATGATGTT 60.045 40.000 0.00 0.00 0.00 2.71
4069 4275 5.888161 GTGGGATGTTAAGAGGATGATGTTT 59.112 40.000 0.00 0.00 0.00 2.83
4070 4276 6.378280 GTGGGATGTTAAGAGGATGATGTTTT 59.622 38.462 0.00 0.00 0.00 2.43
4071 4277 7.556275 GTGGGATGTTAAGAGGATGATGTTTTA 59.444 37.037 0.00 0.00 0.00 1.52
4072 4278 8.281531 TGGGATGTTAAGAGGATGATGTTTTAT 58.718 33.333 0.00 0.00 0.00 1.40
4073 4279 9.136323 GGGATGTTAAGAGGATGATGTTTTATT 57.864 33.333 0.00 0.00 0.00 1.40
4074 4280 9.956720 GGATGTTAAGAGGATGATGTTTTATTG 57.043 33.333 0.00 0.00 0.00 1.90
4075 4281 9.455847 GATGTTAAGAGGATGATGTTTTATTGC 57.544 33.333 0.00 0.00 0.00 3.56
4076 4282 7.771183 TGTTAAGAGGATGATGTTTTATTGCC 58.229 34.615 0.00 0.00 0.00 4.52
4077 4283 7.395772 TGTTAAGAGGATGATGTTTTATTGCCA 59.604 33.333 0.00 0.00 0.00 4.92
4078 4284 5.841957 AGAGGATGATGTTTTATTGCCAC 57.158 39.130 0.00 0.00 0.00 5.01
4079 4285 5.263599 AGAGGATGATGTTTTATTGCCACA 58.736 37.500 0.00 0.00 0.00 4.17
4080 4286 5.126061 AGAGGATGATGTTTTATTGCCACAC 59.874 40.000 0.00 0.00 0.00 3.82
4081 4287 4.771577 AGGATGATGTTTTATTGCCACACA 59.228 37.500 0.00 0.00 0.00 3.72
4082 4288 5.245751 AGGATGATGTTTTATTGCCACACAA 59.754 36.000 0.00 0.00 44.01 3.33
4083 4289 5.931146 GGATGATGTTTTATTGCCACACAAA 59.069 36.000 0.00 0.00 42.86 2.83
4084 4290 6.426328 GGATGATGTTTTATTGCCACACAAAA 59.574 34.615 0.00 0.00 42.86 2.44
4085 4291 7.119553 GGATGATGTTTTATTGCCACACAAAAT 59.880 33.333 0.00 0.00 42.86 1.82
4086 4292 7.798596 TGATGTTTTATTGCCACACAAAATT 57.201 28.000 0.00 0.00 42.86 1.82
4087 4293 8.218338 TGATGTTTTATTGCCACACAAAATTT 57.782 26.923 0.00 0.00 42.86 1.82
4088 4294 8.341173 TGATGTTTTATTGCCACACAAAATTTC 58.659 29.630 0.00 0.00 42.86 2.17
4089 4295 7.615582 TGTTTTATTGCCACACAAAATTTCA 57.384 28.000 0.00 0.00 42.86 2.69
4090 4296 8.044060 TGTTTTATTGCCACACAAAATTTCAA 57.956 26.923 0.00 0.00 42.86 2.69
4091 4297 8.514594 TGTTTTATTGCCACACAAAATTTCAAA 58.485 25.926 0.00 0.00 42.86 2.69
4092 4298 9.513727 GTTTTATTGCCACACAAAATTTCAAAT 57.486 25.926 0.00 0.00 42.86 2.32
4098 4304 8.902040 TGCCACACAAAATTTCAAATTAAAAC 57.098 26.923 0.00 0.00 0.00 2.43
4099 4305 8.514594 TGCCACACAAAATTTCAAATTAAAACA 58.485 25.926 0.00 0.00 0.00 2.83
4100 4306 8.793472 GCCACACAAAATTTCAAATTAAAACAC 58.207 29.630 0.00 0.00 0.00 3.32
4101 4307 9.831737 CCACACAAAATTTCAAATTAAAACACA 57.168 25.926 0.00 0.00 0.00 3.72
4124 4330 8.565896 ACATTACAAGATGTGAGCTATGAAAA 57.434 30.769 0.00 0.00 38.75 2.29
4125 4331 9.013229 ACATTACAAGATGTGAGCTATGAAAAA 57.987 29.630 0.00 0.00 38.75 1.94
4126 4332 9.499585 CATTACAAGATGTGAGCTATGAAAAAG 57.500 33.333 0.00 0.00 0.00 2.27
4127 4333 8.846943 TTACAAGATGTGAGCTATGAAAAAGA 57.153 30.769 0.00 0.00 0.00 2.52
4128 4334 7.138692 ACAAGATGTGAGCTATGAAAAAGAC 57.861 36.000 0.00 0.00 0.00 3.01
4129 4335 6.712095 ACAAGATGTGAGCTATGAAAAAGACA 59.288 34.615 0.00 0.00 0.00 3.41
4130 4336 7.229306 ACAAGATGTGAGCTATGAAAAAGACAA 59.771 33.333 0.00 0.00 0.00 3.18
4131 4337 7.750229 AGATGTGAGCTATGAAAAAGACAAA 57.250 32.000 0.00 0.00 0.00 2.83
4132 4338 8.169977 AGATGTGAGCTATGAAAAAGACAAAA 57.830 30.769 0.00 0.00 0.00 2.44
4133 4339 8.800332 AGATGTGAGCTATGAAAAAGACAAAAT 58.200 29.630 0.00 0.00 0.00 1.82
4134 4340 8.976986 ATGTGAGCTATGAAAAAGACAAAATC 57.023 30.769 0.00 0.00 0.00 2.17
4135 4341 7.939782 TGTGAGCTATGAAAAAGACAAAATCA 58.060 30.769 0.00 0.00 0.00 2.57
4136 4342 8.077991 TGTGAGCTATGAAAAAGACAAAATCAG 58.922 33.333 0.00 0.00 0.00 2.90
4137 4343 7.061557 GTGAGCTATGAAAAAGACAAAATCAGC 59.938 37.037 0.00 0.00 0.00 4.26
4138 4344 6.088824 AGCTATGAAAAAGACAAAATCAGCG 58.911 36.000 0.00 0.00 0.00 5.18
4139 4345 5.858581 GCTATGAAAAAGACAAAATCAGCGT 59.141 36.000 0.00 0.00 0.00 5.07
4140 4346 6.363357 GCTATGAAAAAGACAAAATCAGCGTT 59.637 34.615 0.00 0.00 0.00 4.84
4141 4347 5.947503 TGAAAAAGACAAAATCAGCGTTG 57.052 34.783 0.00 0.00 0.00 4.10
4142 4348 5.645624 TGAAAAAGACAAAATCAGCGTTGA 58.354 33.333 3.86 3.86 37.81 3.18
4143 4349 5.514914 TGAAAAAGACAAAATCAGCGTTGAC 59.485 36.000 3.33 0.00 35.83 3.18
4144 4350 4.900635 AAAGACAAAATCAGCGTTGACT 57.099 36.364 3.33 0.00 35.83 3.41
4145 4351 6.371809 AAAAGACAAAATCAGCGTTGACTA 57.628 33.333 3.33 0.00 35.83 2.59
4146 4352 5.597813 AAGACAAAATCAGCGTTGACTAG 57.402 39.130 3.33 0.00 35.83 2.57
4147 4353 4.632153 AGACAAAATCAGCGTTGACTAGT 58.368 39.130 3.33 0.00 35.83 2.57
4148 4354 4.449068 AGACAAAATCAGCGTTGACTAGTG 59.551 41.667 3.33 3.48 35.83 2.74
4149 4355 3.058914 ACAAAATCAGCGTTGACTAGTGC 60.059 43.478 3.33 0.00 35.83 4.40
4150 4356 1.726853 AATCAGCGTTGACTAGTGCC 58.273 50.000 3.33 0.00 35.83 5.01
4151 4357 0.608130 ATCAGCGTTGACTAGTGCCA 59.392 50.000 3.33 0.00 35.83 4.92
4152 4358 0.391228 TCAGCGTTGACTAGTGCCAA 59.609 50.000 0.00 0.00 0.00 4.52
4153 4359 1.202592 TCAGCGTTGACTAGTGCCAAA 60.203 47.619 0.00 0.00 0.00 3.28
4154 4360 1.806542 CAGCGTTGACTAGTGCCAAAT 59.193 47.619 0.00 0.00 0.00 2.32
4155 4361 3.000041 CAGCGTTGACTAGTGCCAAATA 59.000 45.455 0.00 0.00 0.00 1.40
4156 4362 3.062639 CAGCGTTGACTAGTGCCAAATAG 59.937 47.826 0.00 0.00 0.00 1.73
4157 4363 3.000727 GCGTTGACTAGTGCCAAATAGT 58.999 45.455 0.00 0.00 34.96 2.12
4158 4364 4.081862 AGCGTTGACTAGTGCCAAATAGTA 60.082 41.667 0.00 0.00 32.43 1.82
4159 4365 4.628333 GCGTTGACTAGTGCCAAATAGTAA 59.372 41.667 0.00 0.00 32.43 2.24
4160 4366 5.293569 GCGTTGACTAGTGCCAAATAGTAAT 59.706 40.000 0.00 0.00 32.43 1.89
4161 4367 6.705782 CGTTGACTAGTGCCAAATAGTAATG 58.294 40.000 0.00 0.00 32.43 1.90
4162 4368 6.312918 CGTTGACTAGTGCCAAATAGTAATGT 59.687 38.462 0.00 0.00 32.43 2.71
4163 4369 7.464178 CGTTGACTAGTGCCAAATAGTAATGTC 60.464 40.741 0.00 0.00 32.43 3.06
4164 4370 6.941857 TGACTAGTGCCAAATAGTAATGTCA 58.058 36.000 0.00 0.00 32.43 3.58
4165 4371 6.816640 TGACTAGTGCCAAATAGTAATGTCAC 59.183 38.462 0.00 0.00 32.43 3.67
4166 4372 6.947464 ACTAGTGCCAAATAGTAATGTCACT 58.053 36.000 0.00 7.76 37.34 3.41
4167 4373 8.074613 ACTAGTGCCAAATAGTAATGTCACTA 57.925 34.615 0.00 8.84 35.48 2.74
4168 4374 8.705594 ACTAGTGCCAAATAGTAATGTCACTAT 58.294 33.333 9.35 0.00 42.30 2.12
4170 4376 8.438676 AGTGCCAAATAGTAATGTCACTATTC 57.561 34.615 8.52 0.00 46.27 1.75
4171 4377 8.046708 AGTGCCAAATAGTAATGTCACTATTCA 58.953 33.333 8.52 1.90 46.27 2.57
4172 4378 8.338259 GTGCCAAATAGTAATGTCACTATTCAG 58.662 37.037 8.52 5.41 46.27 3.02
4173 4379 7.498900 TGCCAAATAGTAATGTCACTATTCAGG 59.501 37.037 15.85 15.85 46.27 3.86
4174 4380 7.041098 GCCAAATAGTAATGTCACTATTCAGGG 60.041 40.741 18.84 15.69 46.27 4.45
4175 4381 7.041098 CCAAATAGTAATGTCACTATTCAGGGC 60.041 40.741 8.52 0.00 46.27 5.19
4176 4382 7.380423 AATAGTAATGTCACTATTCAGGGCT 57.620 36.000 3.29 0.00 44.64 5.19
4177 4383 5.028549 AGTAATGTCACTATTCAGGGCTG 57.971 43.478 0.00 0.00 0.00 4.85
4178 4384 4.716784 AGTAATGTCACTATTCAGGGCTGA 59.283 41.667 0.00 0.00 37.91 4.26
4190 4396 5.612725 TTCAGGGCTGAATTTGTCTTTTT 57.387 34.783 0.00 0.00 43.90 1.94
4191 4397 5.200368 TCAGGGCTGAATTTGTCTTTTTC 57.800 39.130 0.00 0.00 36.53 2.29
4192 4398 4.648762 TCAGGGCTGAATTTGTCTTTTTCA 59.351 37.500 0.00 0.00 36.53 2.69
4193 4399 5.305128 TCAGGGCTGAATTTGTCTTTTTCAT 59.695 36.000 0.00 0.00 36.53 2.57
4194 4400 6.493115 TCAGGGCTGAATTTGTCTTTTTCATA 59.507 34.615 0.00 0.00 36.53 2.15
4195 4401 6.810182 CAGGGCTGAATTTGTCTTTTTCATAG 59.190 38.462 0.00 0.00 0.00 2.23
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.630312 AGAGAACGTTGCTTTTAAGGCAA 59.370 39.130 10.40 10.40 45.70 4.52
2 3 3.664537 CGAGAGAACGTTGCTTTTAAGGC 60.665 47.826 5.00 0.00 0.00 4.35
4 5 4.710528 ACGAGAGAACGTTGCTTTTAAG 57.289 40.909 5.00 0.00 44.14 1.85
5 6 5.519566 TGTTACGAGAGAACGTTGCTTTTAA 59.480 36.000 5.00 2.32 44.14 1.52
6 7 5.042593 TGTTACGAGAGAACGTTGCTTTTA 58.957 37.500 5.00 0.00 44.14 1.52
7 8 3.866910 TGTTACGAGAGAACGTTGCTTTT 59.133 39.130 5.00 0.00 44.14 2.27
8 9 3.450578 TGTTACGAGAGAACGTTGCTTT 58.549 40.909 5.00 0.00 44.14 3.51
9 10 3.088194 TGTTACGAGAGAACGTTGCTT 57.912 42.857 5.00 0.00 44.14 3.91
10 11 2.787601 TGTTACGAGAGAACGTTGCT 57.212 45.000 5.00 2.10 44.14 3.91
11 12 3.047796 TCTTGTTACGAGAGAACGTTGC 58.952 45.455 5.00 0.00 44.14 4.17
12 13 5.630896 TTTCTTGTTACGAGAGAACGTTG 57.369 39.130 5.00 0.00 44.14 4.10
13 14 6.532657 TCTTTTTCTTGTTACGAGAGAACGTT 59.467 34.615 0.00 0.00 44.14 3.99
15 16 6.345882 CCTCTTTTTCTTGTTACGAGAGAACG 60.346 42.308 5.23 4.49 32.88 3.95
16 17 6.700520 TCCTCTTTTTCTTGTTACGAGAGAAC 59.299 38.462 5.23 0.00 32.88 3.01
17 18 6.812998 TCCTCTTTTTCTTGTTACGAGAGAA 58.187 36.000 2.29 2.09 32.88 2.87
18 19 6.401047 TCCTCTTTTTCTTGTTACGAGAGA 57.599 37.500 2.29 0.00 32.88 3.10
19 20 5.635700 CCTCCTCTTTTTCTTGTTACGAGAG 59.364 44.000 2.29 0.00 0.00 3.20
20 21 5.303589 TCCTCCTCTTTTTCTTGTTACGAGA 59.696 40.000 0.00 0.00 0.00 4.04
21 22 5.539048 TCCTCCTCTTTTTCTTGTTACGAG 58.461 41.667 0.00 0.00 0.00 4.18
22 23 5.539048 CTCCTCCTCTTTTTCTTGTTACGA 58.461 41.667 0.00 0.00 0.00 3.43
23 24 4.152580 GCTCCTCCTCTTTTTCTTGTTACG 59.847 45.833 0.00 0.00 0.00 3.18
24 25 5.309638 AGCTCCTCCTCTTTTTCTTGTTAC 58.690 41.667 0.00 0.00 0.00 2.50
25 26 5.308237 AGAGCTCCTCCTCTTTTTCTTGTTA 59.692 40.000 10.93 0.00 39.06 2.41
26 27 4.103943 AGAGCTCCTCCTCTTTTTCTTGTT 59.896 41.667 10.93 0.00 39.06 2.83
27 28 3.650461 AGAGCTCCTCCTCTTTTTCTTGT 59.350 43.478 10.93 0.00 39.06 3.16
28 29 4.020307 AGAGAGCTCCTCCTCTTTTTCTTG 60.020 45.833 10.93 0.00 42.06 3.02
29 30 4.167319 AGAGAGCTCCTCCTCTTTTTCTT 58.833 43.478 10.93 0.00 42.06 2.52
30 31 3.769300 GAGAGAGCTCCTCCTCTTTTTCT 59.231 47.826 10.93 2.00 42.06 2.52
31 32 4.123497 GAGAGAGCTCCTCCTCTTTTTC 57.877 50.000 10.93 0.00 42.06 2.29
49 50 7.106239 GGTAGAACATCATTTCTCTTTGGAGA 58.894 38.462 0.00 0.00 45.75 3.71
50 51 6.881065 TGGTAGAACATCATTTCTCTTTGGAG 59.119 38.462 0.00 0.00 37.09 3.86
51 52 6.778821 TGGTAGAACATCATTTCTCTTTGGA 58.221 36.000 0.00 0.00 37.09 3.53
52 53 7.478322 CATGGTAGAACATCATTTCTCTTTGG 58.522 38.462 0.00 0.00 37.09 3.28
53 54 6.971184 GCATGGTAGAACATCATTTCTCTTTG 59.029 38.462 0.00 0.00 37.09 2.77
54 55 6.660521 TGCATGGTAGAACATCATTTCTCTTT 59.339 34.615 0.00 0.00 37.09 2.52
55 56 6.094603 GTGCATGGTAGAACATCATTTCTCTT 59.905 38.462 0.00 0.00 37.09 2.85
56 57 5.587844 GTGCATGGTAGAACATCATTTCTCT 59.412 40.000 0.00 0.00 37.09 3.10
752 793 4.084537 GGTATATACCGCGCATGCATTATC 60.085 45.833 19.57 0.00 42.97 1.75
753 794 3.807622 GGTATATACCGCGCATGCATTAT 59.192 43.478 19.57 10.06 42.97 1.28
754 795 3.191669 GGTATATACCGCGCATGCATTA 58.808 45.455 19.57 2.74 42.97 1.90
802 843 1.160329 AGTGCGTGTGAGTTTGGAGC 61.160 55.000 0.00 0.00 0.00 4.70
875 920 7.064371 GGATAGCAGTGATATTATGCAGTTCAG 59.936 40.741 1.78 0.00 42.45 3.02
878 923 7.013823 AGGATAGCAGTGATATTATGCAGTT 57.986 36.000 1.78 0.00 42.45 3.16
898 943 8.634444 GCACTAGGTCGATGATATTTATAGGAT 58.366 37.037 0.00 0.00 0.00 3.24
915 960 2.102553 GCGTCTCGGCACTAGGTC 59.897 66.667 0.00 0.00 0.00 3.85
917 962 1.805945 GTTGCGTCTCGGCACTAGG 60.806 63.158 0.00 0.00 43.82 3.02
930 975 3.862063 GAGCTTGGTGTGCGTTGCG 62.862 63.158 0.00 0.00 35.28 4.85
955 1000 0.959867 TACGTAGCGTACTGGGTGCA 60.960 55.000 0.00 0.00 41.54 4.57
964 1009 4.034394 CACAAGGAGTATGTACGTAGCGTA 59.966 45.833 0.00 0.00 41.54 4.42
965 1010 3.012518 ACAAGGAGTATGTACGTAGCGT 58.987 45.455 0.00 0.00 44.35 5.07
966 1011 3.181503 ACACAAGGAGTATGTACGTAGCG 60.182 47.826 0.00 0.00 0.00 4.26
967 1012 4.103357 CACACAAGGAGTATGTACGTAGC 58.897 47.826 0.00 0.00 0.00 3.58
969 1014 4.520111 ACACACACAAGGAGTATGTACGTA 59.480 41.667 0.00 0.00 35.18 3.57
970 1015 3.319972 ACACACACAAGGAGTATGTACGT 59.680 43.478 0.00 0.00 35.18 3.57
980 1025 2.498644 TGGTTTCACACACACAAGGA 57.501 45.000 0.00 0.00 0.00 3.36
981 1026 3.446799 CATTGGTTTCACACACACAAGG 58.553 45.455 0.00 0.00 0.00 3.61
982 1027 3.130164 TCCATTGGTTTCACACACACAAG 59.870 43.478 1.86 0.00 0.00 3.16
983 1028 3.092301 TCCATTGGTTTCACACACACAA 58.908 40.909 1.86 0.00 0.00 3.33
1080 1155 1.080501 CTTCTGCGGCTCGAACAGA 60.081 57.895 0.00 3.71 38.62 3.41
1144 1225 1.227234 CCGGCGACAGTGATGCATA 60.227 57.895 9.30 0.00 0.00 3.14
1146 1227 3.647649 CTCCGGCGACAGTGATGCA 62.648 63.158 9.30 0.00 0.00 3.96
1702 1801 2.580867 GCAGCGCGAGTAGGAGTG 60.581 66.667 12.10 0.00 0.00 3.51
2009 2108 1.134580 CACAGGAGATGCCGATGACTT 60.135 52.381 0.00 0.00 43.43 3.01
2026 2125 2.571757 GACGGACTCGATGGCACA 59.428 61.111 0.00 0.00 41.29 4.57
2052 2151 2.513204 TCGAGGTCGGCGTAGAGG 60.513 66.667 6.85 0.00 40.29 3.69
2210 2309 4.731853 TCCTCATGTCCCCGGGCA 62.732 66.667 17.73 9.59 0.00 5.36
2215 2314 0.179006 GCCTTGATCCTCATGTCCCC 60.179 60.000 0.00 0.00 0.00 4.81
2279 2386 3.961414 GCTTCCCGGTGTTCCCCA 61.961 66.667 0.00 0.00 0.00 4.96
2322 2429 0.375454 CGTTGCTCACGGTGAAAACA 59.625 50.000 24.47 16.07 45.89 2.83
2370 2477 0.035630 GCAGCTCCAACTGGACATCT 60.036 55.000 0.00 0.00 39.78 2.90
2371 2478 0.321919 TGCAGCTCCAACTGGACATC 60.322 55.000 0.00 0.00 39.78 3.06
2481 2592 3.987404 GGCAAGAACATGGCGACT 58.013 55.556 0.00 0.00 36.07 4.18
2506 2617 0.318699 TGACACTCCTTCGTCGCAAG 60.319 55.000 0.00 0.00 34.78 4.01
2640 2754 1.579932 GTCCTTCAGAGCGTCGACA 59.420 57.895 17.16 0.00 0.00 4.35
2649 2763 1.320344 CGACGATGGGGTCCTTCAGA 61.320 60.000 0.00 0.00 33.30 3.27
2781 2895 1.492993 GGACCTTGGCCTTCTCCACT 61.493 60.000 3.32 0.00 35.50 4.00
2797 2911 1.539929 CCCGATGAAGATGCTGAGGAC 60.540 57.143 0.00 0.00 0.00 3.85
3209 3323 6.376018 TCGCAGTGTGCAGGTGTATATATATA 59.624 38.462 0.00 0.00 45.36 0.86
3210 3324 5.185056 TCGCAGTGTGCAGGTGTATATATAT 59.815 40.000 0.00 0.00 45.36 0.86
3211 3325 4.521256 TCGCAGTGTGCAGGTGTATATATA 59.479 41.667 0.00 0.00 45.36 0.86
3212 3326 3.320826 TCGCAGTGTGCAGGTGTATATAT 59.679 43.478 0.00 0.00 45.36 0.86
3367 3504 8.596271 TTGATTGTATACATAACATACCACGG 57.404 34.615 6.36 0.00 0.00 4.94
3513 3719 6.356556 ACTTAGATGTGCAATACTTATGGCA 58.643 36.000 0.00 0.00 40.19 4.92
3514 3720 6.483307 TGACTTAGATGTGCAATACTTATGGC 59.517 38.462 0.00 0.00 33.16 4.40
3515 3721 8.613060 ATGACTTAGATGTGCAATACTTATGG 57.387 34.615 0.00 0.00 0.00 2.74
3519 3725 9.265901 GACATATGACTTAGATGTGCAATACTT 57.734 33.333 10.38 0.00 41.09 2.24
3520 3726 8.424133 TGACATATGACTTAGATGTGCAATACT 58.576 33.333 10.38 0.00 41.09 2.12
3521 3727 8.593492 TGACATATGACTTAGATGTGCAATAC 57.407 34.615 10.38 0.00 41.09 1.89
3522 3728 9.783081 AATGACATATGACTTAGATGTGCAATA 57.217 29.630 10.38 0.00 41.09 1.90
3523 3729 8.565416 CAATGACATATGACTTAGATGTGCAAT 58.435 33.333 10.38 0.00 41.09 3.56
3524 3730 7.769970 TCAATGACATATGACTTAGATGTGCAA 59.230 33.333 10.38 0.00 41.09 4.08
3525 3731 7.274447 TCAATGACATATGACTTAGATGTGCA 58.726 34.615 10.38 0.00 41.09 4.57
3526 3732 7.719778 TCAATGACATATGACTTAGATGTGC 57.280 36.000 10.38 0.00 41.09 4.57
3537 3743 9.904198 TGGAGAGTTTAAATCAATGACATATGA 57.096 29.630 10.38 0.00 0.00 2.15
3540 3746 9.739276 AGTTGGAGAGTTTAAATCAATGACATA 57.261 29.630 0.00 0.00 0.00 2.29
3541 3747 8.641498 AGTTGGAGAGTTTAAATCAATGACAT 57.359 30.769 0.00 0.00 0.00 3.06
3542 3748 7.174946 GGAGTTGGAGAGTTTAAATCAATGACA 59.825 37.037 0.00 0.00 0.00 3.58
3543 3749 7.391833 AGGAGTTGGAGAGTTTAAATCAATGAC 59.608 37.037 0.00 0.00 0.00 3.06
3544 3750 7.461749 AGGAGTTGGAGAGTTTAAATCAATGA 58.538 34.615 0.00 0.00 0.00 2.57
3545 3751 7.693969 AGGAGTTGGAGAGTTTAAATCAATG 57.306 36.000 0.00 0.00 0.00 2.82
3546 3752 8.712228 AAAGGAGTTGGAGAGTTTAAATCAAT 57.288 30.769 0.00 0.00 0.00 2.57
3547 3753 9.807921 ATAAAGGAGTTGGAGAGTTTAAATCAA 57.192 29.630 0.00 0.00 0.00 2.57
3548 3754 9.807921 AATAAAGGAGTTGGAGAGTTTAAATCA 57.192 29.630 0.00 0.00 0.00 2.57
3554 3760 9.807921 TGAATAAATAAAGGAGTTGGAGAGTTT 57.192 29.630 0.00 0.00 0.00 2.66
3555 3761 9.981460 ATGAATAAATAAAGGAGTTGGAGAGTT 57.019 29.630 0.00 0.00 0.00 3.01
3556 3762 9.981460 AATGAATAAATAAAGGAGTTGGAGAGT 57.019 29.630 0.00 0.00 0.00 3.24
3558 3764 9.973661 TCAATGAATAAATAAAGGAGTTGGAGA 57.026 29.630 0.00 0.00 0.00 3.71
3576 3782 8.961294 TGATTCTTTGTTGGTTTTCAATGAAT 57.039 26.923 14.28 14.28 43.87 2.57
3577 3783 8.783833 TTGATTCTTTGTTGGTTTTCAATGAA 57.216 26.923 0.00 0.00 39.83 2.57
3578 3784 8.961294 ATTGATTCTTTGTTGGTTTTCAATGA 57.039 26.923 0.00 0.00 37.73 2.57
3587 3793 9.912634 CTTGTGTATAATTGATTCTTTGTTGGT 57.087 29.630 0.00 0.00 0.00 3.67
3588 3794 9.912634 ACTTGTGTATAATTGATTCTTTGTTGG 57.087 29.630 0.00 0.00 0.00 3.77
3601 3807 9.838339 CCATCTCCTCTTTACTTGTGTATAATT 57.162 33.333 0.00 0.00 0.00 1.40
3602 3808 7.934120 GCCATCTCCTCTTTACTTGTGTATAAT 59.066 37.037 0.00 0.00 0.00 1.28
3603 3809 7.093068 TGCCATCTCCTCTTTACTTGTGTATAA 60.093 37.037 0.00 0.00 0.00 0.98
3604 3810 6.382859 TGCCATCTCCTCTTTACTTGTGTATA 59.617 38.462 0.00 0.00 0.00 1.47
3605 3811 5.189736 TGCCATCTCCTCTTTACTTGTGTAT 59.810 40.000 0.00 0.00 0.00 2.29
3606 3812 4.530553 TGCCATCTCCTCTTTACTTGTGTA 59.469 41.667 0.00 0.00 0.00 2.90
3607 3813 3.327757 TGCCATCTCCTCTTTACTTGTGT 59.672 43.478 0.00 0.00 0.00 3.72
3608 3814 3.937706 CTGCCATCTCCTCTTTACTTGTG 59.062 47.826 0.00 0.00 0.00 3.33
3609 3815 3.840666 TCTGCCATCTCCTCTTTACTTGT 59.159 43.478 0.00 0.00 0.00 3.16
3610 3816 4.081198 AGTCTGCCATCTCCTCTTTACTTG 60.081 45.833 0.00 0.00 0.00 3.16
3611 3817 4.081198 CAGTCTGCCATCTCCTCTTTACTT 60.081 45.833 0.00 0.00 0.00 2.24
3612 3818 3.450457 CAGTCTGCCATCTCCTCTTTACT 59.550 47.826 0.00 0.00 0.00 2.24
3613 3819 3.431486 CCAGTCTGCCATCTCCTCTTTAC 60.431 52.174 0.00 0.00 0.00 2.01
3614 3820 2.768527 CCAGTCTGCCATCTCCTCTTTA 59.231 50.000 0.00 0.00 0.00 1.85
3615 3821 1.558756 CCAGTCTGCCATCTCCTCTTT 59.441 52.381 0.00 0.00 0.00 2.52
3616 3822 1.202330 CCAGTCTGCCATCTCCTCTT 58.798 55.000 0.00 0.00 0.00 2.85
3617 3823 1.336632 GCCAGTCTGCCATCTCCTCT 61.337 60.000 0.00 0.00 0.00 3.69
3618 3824 1.145819 GCCAGTCTGCCATCTCCTC 59.854 63.158 0.00 0.00 0.00 3.71
3619 3825 1.614525 TGCCAGTCTGCCATCTCCT 60.615 57.895 0.00 0.00 0.00 3.69
3620 3826 1.153208 CTGCCAGTCTGCCATCTCC 60.153 63.158 0.00 0.00 0.00 3.71
3621 3827 0.826715 TACTGCCAGTCTGCCATCTC 59.173 55.000 0.00 0.00 0.00 2.75
3622 3828 0.829333 CTACTGCCAGTCTGCCATCT 59.171 55.000 0.00 0.00 0.00 2.90
3623 3829 0.179062 CCTACTGCCAGTCTGCCATC 60.179 60.000 0.00 0.00 0.00 3.51
3624 3830 1.630126 CCCTACTGCCAGTCTGCCAT 61.630 60.000 0.00 0.00 0.00 4.40
3625 3831 2.293318 CCCTACTGCCAGTCTGCCA 61.293 63.158 0.00 0.00 0.00 4.92
3626 3832 2.586792 CCCTACTGCCAGTCTGCC 59.413 66.667 0.00 0.00 0.00 4.85
3627 3833 2.586792 CCCCTACTGCCAGTCTGC 59.413 66.667 0.00 0.00 0.00 4.26
3628 3834 2.586792 GCCCCTACTGCCAGTCTG 59.413 66.667 0.00 0.00 0.00 3.51
3635 3841 2.437085 AGTTATTTGGCCCCTACTGC 57.563 50.000 0.00 0.00 0.00 4.40
3636 3842 5.124936 GTGTTAAGTTATTTGGCCCCTACTG 59.875 44.000 0.00 0.00 0.00 2.74
3637 3843 5.222171 TGTGTTAAGTTATTTGGCCCCTACT 60.222 40.000 0.00 0.00 0.00 2.57
3638 3844 5.011586 TGTGTTAAGTTATTTGGCCCCTAC 58.988 41.667 0.00 0.00 0.00 3.18
3639 3845 5.258216 TGTGTTAAGTTATTTGGCCCCTA 57.742 39.130 0.00 0.00 0.00 3.53
3640 3846 4.120946 TGTGTTAAGTTATTTGGCCCCT 57.879 40.909 0.00 0.00 0.00 4.79
3641 3847 4.875561 TTGTGTTAAGTTATTTGGCCCC 57.124 40.909 0.00 0.00 0.00 5.80
3642 3848 5.641636 CCAATTGTGTTAAGTTATTTGGCCC 59.358 40.000 0.00 0.00 0.00 5.80
3643 3849 5.641636 CCCAATTGTGTTAAGTTATTTGGCC 59.358 40.000 4.43 0.00 0.00 5.36
3644 3850 6.459923 TCCCAATTGTGTTAAGTTATTTGGC 58.540 36.000 4.43 0.00 0.00 4.52
3645 3851 7.891561 TCTCCCAATTGTGTTAAGTTATTTGG 58.108 34.615 4.43 0.00 0.00 3.28
3646 3852 9.357652 CATCTCCCAATTGTGTTAAGTTATTTG 57.642 33.333 4.43 0.00 0.00 2.32
3647 3853 8.034804 GCATCTCCCAATTGTGTTAAGTTATTT 58.965 33.333 4.43 0.00 0.00 1.40
3648 3854 7.363793 GGCATCTCCCAATTGTGTTAAGTTATT 60.364 37.037 4.43 0.00 0.00 1.40
3684 3890 0.111704 GTATACAGTTGATGCGCGCG 60.112 55.000 28.44 28.44 0.00 6.86
3697 3903 5.532779 TGTGGAATGCAACAGTTTGTATACA 59.467 36.000 0.08 0.08 37.08 2.29
3710 3916 2.429971 TCAGCAACTTTGTGGAATGCAA 59.570 40.909 0.00 0.00 39.42 4.08
3730 3936 0.166814 GCATTCGGAGCGCCATATTC 59.833 55.000 7.44 0.00 0.00 1.75
3761 3967 4.149046 GTCGACTGAGACTTAGCAAAACTG 59.851 45.833 8.70 0.00 38.09 3.16
3762 3968 4.299978 GTCGACTGAGACTTAGCAAAACT 58.700 43.478 8.70 0.00 38.09 2.66
3763 3969 3.119792 CGTCGACTGAGACTTAGCAAAAC 59.880 47.826 14.70 0.00 38.90 2.43
3764 3970 3.243301 ACGTCGACTGAGACTTAGCAAAA 60.243 43.478 14.70 0.00 38.90 2.44
3765 3971 2.292569 ACGTCGACTGAGACTTAGCAAA 59.707 45.455 14.70 0.00 38.90 3.68
3766 3972 1.878088 ACGTCGACTGAGACTTAGCAA 59.122 47.619 14.70 0.00 38.90 3.91
3767 3973 1.463831 GACGTCGACTGAGACTTAGCA 59.536 52.381 14.70 0.00 38.90 3.49
3768 3974 1.733360 AGACGTCGACTGAGACTTAGC 59.267 52.381 14.70 0.00 38.90 3.09
3769 3975 4.175516 AGTAGACGTCGACTGAGACTTAG 58.824 47.826 27.46 0.00 38.90 2.18
3770 3976 4.185467 AGTAGACGTCGACTGAGACTTA 57.815 45.455 27.46 0.21 38.90 2.24
3771 3977 3.042871 AGTAGACGTCGACTGAGACTT 57.957 47.619 27.46 4.71 38.90 3.01
3772 3978 2.747396 AGTAGACGTCGACTGAGACT 57.253 50.000 27.46 12.17 38.90 3.24
3773 3979 3.372869 GAAGTAGACGTCGACTGAGAC 57.627 52.381 28.47 17.15 37.76 3.36
3781 3987 4.201656 TGAGACATAACGAAGTAGACGTCG 60.202 45.833 14.98 14.98 45.00 5.12
3782 3988 5.163874 ACTGAGACATAACGAAGTAGACGTC 60.164 44.000 7.70 7.70 45.00 4.34
3783 3989 4.694509 ACTGAGACATAACGAAGTAGACGT 59.305 41.667 0.00 0.00 45.00 4.34
3784 3990 5.219226 ACTGAGACATAACGAAGTAGACG 57.781 43.478 0.00 0.00 45.00 4.18
3785 3991 5.063186 TCGACTGAGACATAACGAAGTAGAC 59.937 44.000 0.00 0.00 45.00 2.59
3786 3992 5.173664 TCGACTGAGACATAACGAAGTAGA 58.826 41.667 0.00 0.00 45.00 2.59
3787 3993 5.466432 TCGACTGAGACATAACGAAGTAG 57.534 43.478 0.00 0.00 45.00 2.57
3788 3994 5.353400 ACATCGACTGAGACATAACGAAGTA 59.647 40.000 0.00 0.00 45.00 2.24
3790 3996 4.663166 ACATCGACTGAGACATAACGAAG 58.337 43.478 0.00 0.00 33.77 3.79
3791 3997 4.696899 ACATCGACTGAGACATAACGAA 57.303 40.909 0.00 0.00 33.77 3.85
3792 3998 4.696899 AACATCGACTGAGACATAACGA 57.303 40.909 0.00 0.00 0.00 3.85
3793 3999 8.729529 AATATAACATCGACTGAGACATAACG 57.270 34.615 0.00 0.00 0.00 3.18
3797 4003 9.770097 AATGAAATATAACATCGACTGAGACAT 57.230 29.630 0.00 0.00 0.00 3.06
3798 4004 9.034544 CAATGAAATATAACATCGACTGAGACA 57.965 33.333 0.00 0.00 0.00 3.41
3799 4005 9.249457 TCAATGAAATATAACATCGACTGAGAC 57.751 33.333 0.00 0.00 0.00 3.36
3800 4006 9.987272 ATCAATGAAATATAACATCGACTGAGA 57.013 29.630 0.00 0.00 0.00 3.27
3802 4008 9.987272 AGATCAATGAAATATAACATCGACTGA 57.013 29.630 0.00 0.00 0.00 3.41
3805 4011 9.322776 GCAAGATCAATGAAATATAACATCGAC 57.677 33.333 0.00 0.00 0.00 4.20
3806 4012 9.054922 TGCAAGATCAATGAAATATAACATCGA 57.945 29.630 0.00 0.00 0.00 3.59
3807 4013 9.836076 ATGCAAGATCAATGAAATATAACATCG 57.164 29.630 0.00 0.00 0.00 3.84
3872 4078 8.097038 GCCAAGTGATATGGTATATGAGAAGAA 58.903 37.037 0.00 0.00 40.23 2.52
3873 4079 7.455953 AGCCAAGTGATATGGTATATGAGAAGA 59.544 37.037 0.00 0.00 40.23 2.87
3874 4080 7.548427 CAGCCAAGTGATATGGTATATGAGAAG 59.452 40.741 0.00 0.00 40.23 2.85
3875 4081 7.235399 TCAGCCAAGTGATATGGTATATGAGAA 59.765 37.037 0.00 0.00 40.23 2.87
3876 4082 6.725834 TCAGCCAAGTGATATGGTATATGAGA 59.274 38.462 0.00 0.00 40.23 3.27
3877 4083 6.939622 TCAGCCAAGTGATATGGTATATGAG 58.060 40.000 0.00 0.00 40.23 2.90
3878 4084 6.725834 TCTCAGCCAAGTGATATGGTATATGA 59.274 38.462 0.00 0.00 40.23 2.15
3879 4085 6.815641 GTCTCAGCCAAGTGATATGGTATATG 59.184 42.308 0.00 0.00 40.23 1.78
3880 4086 6.728164 AGTCTCAGCCAAGTGATATGGTATAT 59.272 38.462 0.00 0.00 40.23 0.86
3881 4087 6.077993 AGTCTCAGCCAAGTGATATGGTATA 58.922 40.000 0.00 0.00 40.23 1.47
3882 4088 4.904251 AGTCTCAGCCAAGTGATATGGTAT 59.096 41.667 0.00 0.00 40.23 2.73
3883 4089 4.290093 AGTCTCAGCCAAGTGATATGGTA 58.710 43.478 0.00 0.00 40.23 3.25
3884 4090 3.110705 AGTCTCAGCCAAGTGATATGGT 58.889 45.455 0.00 0.00 40.23 3.55
3885 4091 3.834489 AGTCTCAGCCAAGTGATATGG 57.166 47.619 0.00 0.00 41.08 2.74
3886 4092 3.875727 CCAAGTCTCAGCCAAGTGATATG 59.124 47.826 0.00 0.00 0.00 1.78
3887 4093 3.521126 ACCAAGTCTCAGCCAAGTGATAT 59.479 43.478 0.00 0.00 0.00 1.63
3888 4094 2.906389 ACCAAGTCTCAGCCAAGTGATA 59.094 45.455 0.00 0.00 0.00 2.15
3889 4095 1.701847 ACCAAGTCTCAGCCAAGTGAT 59.298 47.619 0.00 0.00 0.00 3.06
3890 4096 1.131638 ACCAAGTCTCAGCCAAGTGA 58.868 50.000 0.00 0.00 0.00 3.41
3891 4097 1.972872 AACCAAGTCTCAGCCAAGTG 58.027 50.000 0.00 0.00 0.00 3.16
3892 4098 3.136626 ACTTAACCAAGTCTCAGCCAAGT 59.863 43.478 0.00 0.00 41.25 3.16
3893 4099 3.744660 ACTTAACCAAGTCTCAGCCAAG 58.255 45.455 0.00 0.00 41.25 3.61
3894 4100 3.857157 ACTTAACCAAGTCTCAGCCAA 57.143 42.857 0.00 0.00 41.25 4.52
3904 4110 3.005472 TGGTCGACTGAGACTTAACCAAG 59.995 47.826 16.46 0.00 40.76 3.61
3905 4111 2.960384 TGGTCGACTGAGACTTAACCAA 59.040 45.455 16.46 0.00 40.76 3.67
3906 4112 2.589720 TGGTCGACTGAGACTTAACCA 58.410 47.619 16.46 0.00 40.76 3.67
3907 4113 3.255149 TCTTGGTCGACTGAGACTTAACC 59.745 47.826 16.46 0.00 40.76 2.85
3908 4114 4.228317 GTCTTGGTCGACTGAGACTTAAC 58.772 47.826 28.58 13.89 40.76 2.01
3909 4115 3.255149 GGTCTTGGTCGACTGAGACTTAA 59.745 47.826 31.42 10.44 40.76 1.85
3910 4116 2.818432 GGTCTTGGTCGACTGAGACTTA 59.182 50.000 31.42 10.71 40.76 2.24
3911 4117 1.614413 GGTCTTGGTCGACTGAGACTT 59.386 52.381 31.42 0.00 40.76 3.01
3912 4118 1.202952 AGGTCTTGGTCGACTGAGACT 60.203 52.381 31.42 22.08 40.76 3.24
3913 4119 1.249407 AGGTCTTGGTCGACTGAGAC 58.751 55.000 28.26 28.26 40.25 3.36
3914 4120 2.305052 TCTAGGTCTTGGTCGACTGAGA 59.695 50.000 16.46 15.32 34.38 3.27
3915 4121 2.420722 GTCTAGGTCTTGGTCGACTGAG 59.579 54.545 16.46 13.25 34.38 3.35
3916 4122 2.224695 TGTCTAGGTCTTGGTCGACTGA 60.225 50.000 16.46 8.78 34.38 3.41
3917 4123 2.095161 GTGTCTAGGTCTTGGTCGACTG 60.095 54.545 16.46 6.47 34.38 3.51
3918 4124 2.161030 GTGTCTAGGTCTTGGTCGACT 58.839 52.381 16.46 0.00 34.38 4.18
3919 4125 1.884579 TGTGTCTAGGTCTTGGTCGAC 59.115 52.381 7.13 7.13 0.00 4.20
3920 4126 2.281539 TGTGTCTAGGTCTTGGTCGA 57.718 50.000 0.00 0.00 0.00 4.20
3921 4127 2.159226 GGATGTGTCTAGGTCTTGGTCG 60.159 54.545 0.00 0.00 0.00 4.79
3922 4128 3.100671 AGGATGTGTCTAGGTCTTGGTC 58.899 50.000 0.00 0.00 0.00 4.02
3923 4129 2.834549 CAGGATGTGTCTAGGTCTTGGT 59.165 50.000 0.00 0.00 0.00 3.67
3924 4130 2.169352 CCAGGATGTGTCTAGGTCTTGG 59.831 54.545 0.00 0.00 32.58 3.61
3925 4131 3.099905 TCCAGGATGTGTCTAGGTCTTG 58.900 50.000 0.00 0.00 0.00 3.02
3926 4132 3.474798 TCCAGGATGTGTCTAGGTCTT 57.525 47.619 0.00 0.00 0.00 3.01
3927 4133 3.474798 TTCCAGGATGTGTCTAGGTCT 57.525 47.619 0.00 0.00 0.00 3.85
3928 4134 4.446371 CAATTCCAGGATGTGTCTAGGTC 58.554 47.826 0.00 0.00 0.00 3.85
3929 4135 3.200825 CCAATTCCAGGATGTGTCTAGGT 59.799 47.826 0.00 0.00 0.00 3.08
3930 4136 3.813443 CCAATTCCAGGATGTGTCTAGG 58.187 50.000 0.00 0.00 0.00 3.02
3931 4137 3.118112 AGCCAATTCCAGGATGTGTCTAG 60.118 47.826 0.00 0.00 0.00 2.43
3932 4138 2.846206 AGCCAATTCCAGGATGTGTCTA 59.154 45.455 0.00 0.00 0.00 2.59
3933 4139 1.637553 AGCCAATTCCAGGATGTGTCT 59.362 47.619 0.00 0.00 0.00 3.41
3934 4140 2.134789 AGCCAATTCCAGGATGTGTC 57.865 50.000 0.00 0.00 0.00 3.67
3935 4141 2.173519 CAAGCCAATTCCAGGATGTGT 58.826 47.619 0.00 0.00 0.00 3.72
3936 4142 2.449464 TCAAGCCAATTCCAGGATGTG 58.551 47.619 0.00 0.00 0.00 3.21
3937 4143 2.827921 GTTCAAGCCAATTCCAGGATGT 59.172 45.455 0.00 0.00 0.00 3.06
3938 4144 2.827322 TGTTCAAGCCAATTCCAGGATG 59.173 45.455 0.00 0.00 0.00 3.51
3939 4145 2.827921 GTGTTCAAGCCAATTCCAGGAT 59.172 45.455 0.00 0.00 0.00 3.24
3940 4146 2.158475 AGTGTTCAAGCCAATTCCAGGA 60.158 45.455 0.00 0.00 0.00 3.86
3941 4147 2.229784 GAGTGTTCAAGCCAATTCCAGG 59.770 50.000 0.00 0.00 0.00 4.45
3942 4148 3.057736 CAGAGTGTTCAAGCCAATTCCAG 60.058 47.826 0.00 0.00 0.00 3.86
3943 4149 2.886523 CAGAGTGTTCAAGCCAATTCCA 59.113 45.455 0.00 0.00 0.00 3.53
3944 4150 3.057946 GTCAGAGTGTTCAAGCCAATTCC 60.058 47.826 0.00 0.00 0.00 3.01
3945 4151 3.057946 GGTCAGAGTGTTCAAGCCAATTC 60.058 47.826 0.00 0.00 0.00 2.17
3946 4152 2.887152 GGTCAGAGTGTTCAAGCCAATT 59.113 45.455 0.00 0.00 0.00 2.32
3947 4153 2.158623 TGGTCAGAGTGTTCAAGCCAAT 60.159 45.455 0.00 0.00 0.00 3.16
3948 4154 1.211703 TGGTCAGAGTGTTCAAGCCAA 59.788 47.619 0.00 0.00 0.00 4.52
3949 4155 0.836606 TGGTCAGAGTGTTCAAGCCA 59.163 50.000 0.00 0.00 0.00 4.75
3950 4156 1.070758 TCTGGTCAGAGTGTTCAAGCC 59.929 52.381 0.00 0.00 32.82 4.35
3951 4157 2.533266 TCTGGTCAGAGTGTTCAAGC 57.467 50.000 0.00 0.00 32.82 4.01
3952 4158 3.260380 AGGATCTGGTCAGAGTGTTCAAG 59.740 47.826 6.81 0.00 41.33 3.02
3953 4159 3.242867 AGGATCTGGTCAGAGTGTTCAA 58.757 45.455 6.81 0.00 41.33 2.69
3954 4160 2.828520 GAGGATCTGGTCAGAGTGTTCA 59.171 50.000 6.81 0.00 41.33 3.18
3955 4161 3.518634 GAGGATCTGGTCAGAGTGTTC 57.481 52.381 6.81 0.00 41.33 3.18
3969 4175 3.181485 CCGGTTTCAGTACAGAGAGGATC 60.181 52.174 0.00 0.00 0.00 3.36
3970 4176 2.761208 CCGGTTTCAGTACAGAGAGGAT 59.239 50.000 0.00 0.00 0.00 3.24
3971 4177 2.168496 CCGGTTTCAGTACAGAGAGGA 58.832 52.381 0.00 0.00 0.00 3.71
3972 4178 1.893801 ACCGGTTTCAGTACAGAGAGG 59.106 52.381 0.00 0.00 0.00 3.69
3973 4179 2.557056 TCACCGGTTTCAGTACAGAGAG 59.443 50.000 2.97 0.00 0.00 3.20
3974 4180 2.589720 TCACCGGTTTCAGTACAGAGA 58.410 47.619 2.97 0.00 0.00 3.10
3975 4181 3.380479 TTCACCGGTTTCAGTACAGAG 57.620 47.619 2.97 0.00 0.00 3.35
3976 4182 3.823281 TTTCACCGGTTTCAGTACAGA 57.177 42.857 2.97 0.00 0.00 3.41
3977 4183 3.002965 GGTTTTCACCGGTTTCAGTACAG 59.997 47.826 2.97 0.00 31.60 2.74
3978 4184 2.944349 GGTTTTCACCGGTTTCAGTACA 59.056 45.455 2.97 0.00 31.60 2.90
3979 4185 3.614159 GGTTTTCACCGGTTTCAGTAC 57.386 47.619 2.97 0.00 31.60 2.73
3990 4196 4.625972 TCTTTTTCTCGTGGTTTTCACC 57.374 40.909 0.00 0.00 43.23 4.02
3991 4197 5.578776 ACATCTTTTTCTCGTGGTTTTCAC 58.421 37.500 0.00 0.00 42.74 3.18
3992 4198 5.828299 ACATCTTTTTCTCGTGGTTTTCA 57.172 34.783 0.00 0.00 0.00 2.69
3993 4199 7.274686 TCAAAACATCTTTTTCTCGTGGTTTTC 59.725 33.333 0.00 0.00 35.68 2.29
3994 4200 7.093992 TCAAAACATCTTTTTCTCGTGGTTTT 58.906 30.769 0.00 0.00 37.60 2.43
3995 4201 6.626302 TCAAAACATCTTTTTCTCGTGGTTT 58.374 32.000 0.00 0.00 30.40 3.27
3996 4202 6.202516 TCAAAACATCTTTTTCTCGTGGTT 57.797 33.333 0.00 0.00 0.00 3.67
3997 4203 5.828299 TCAAAACATCTTTTTCTCGTGGT 57.172 34.783 0.00 0.00 0.00 4.16
3998 4204 6.265577 ACTTCAAAACATCTTTTTCTCGTGG 58.734 36.000 0.00 0.00 0.00 4.94
3999 4205 7.740519 AACTTCAAAACATCTTTTTCTCGTG 57.259 32.000 0.00 0.00 0.00 4.35
4000 4206 8.026607 TGAAACTTCAAAACATCTTTTTCTCGT 58.973 29.630 0.00 0.00 33.55 4.18
4001 4207 8.393395 TGAAACTTCAAAACATCTTTTTCTCG 57.607 30.769 0.00 0.00 33.55 4.04
4039 4245 6.953520 TCATCCTCTTAACATCCCACATTTTT 59.046 34.615 0.00 0.00 0.00 1.94
4040 4246 6.493166 TCATCCTCTTAACATCCCACATTTT 58.507 36.000 0.00 0.00 0.00 1.82
4041 4247 6.078456 TCATCCTCTTAACATCCCACATTT 57.922 37.500 0.00 0.00 0.00 2.32
4042 4248 5.715439 TCATCCTCTTAACATCCCACATT 57.285 39.130 0.00 0.00 0.00 2.71
4043 4249 5.133322 ACATCATCCTCTTAACATCCCACAT 59.867 40.000 0.00 0.00 0.00 3.21
4044 4250 4.474651 ACATCATCCTCTTAACATCCCACA 59.525 41.667 0.00 0.00 0.00 4.17
4045 4251 5.041191 ACATCATCCTCTTAACATCCCAC 57.959 43.478 0.00 0.00 0.00 4.61
4046 4252 5.715439 AACATCATCCTCTTAACATCCCA 57.285 39.130 0.00 0.00 0.00 4.37
4047 4253 8.697507 ATAAAACATCATCCTCTTAACATCCC 57.302 34.615 0.00 0.00 0.00 3.85
4048 4254 9.956720 CAATAAAACATCATCCTCTTAACATCC 57.043 33.333 0.00 0.00 0.00 3.51
4049 4255 9.455847 GCAATAAAACATCATCCTCTTAACATC 57.544 33.333 0.00 0.00 0.00 3.06
4050 4256 8.416329 GGCAATAAAACATCATCCTCTTAACAT 58.584 33.333 0.00 0.00 0.00 2.71
4051 4257 7.395772 TGGCAATAAAACATCATCCTCTTAACA 59.604 33.333 0.00 0.00 0.00 2.41
4052 4258 7.702348 GTGGCAATAAAACATCATCCTCTTAAC 59.298 37.037 0.00 0.00 0.00 2.01
4053 4259 7.395772 TGTGGCAATAAAACATCATCCTCTTAA 59.604 33.333 0.00 0.00 0.00 1.85
4054 4260 6.889177 TGTGGCAATAAAACATCATCCTCTTA 59.111 34.615 0.00 0.00 0.00 2.10
4055 4261 5.716228 TGTGGCAATAAAACATCATCCTCTT 59.284 36.000 0.00 0.00 0.00 2.85
4056 4262 5.126061 GTGTGGCAATAAAACATCATCCTCT 59.874 40.000 0.00 0.00 0.00 3.69
4057 4263 5.105797 TGTGTGGCAATAAAACATCATCCTC 60.106 40.000 0.00 0.00 0.00 3.71
4058 4264 4.771577 TGTGTGGCAATAAAACATCATCCT 59.228 37.500 0.00 0.00 0.00 3.24
4059 4265 5.070770 TGTGTGGCAATAAAACATCATCC 57.929 39.130 0.00 0.00 0.00 3.51
4060 4266 7.418840 TTTTGTGTGGCAATAAAACATCATC 57.581 32.000 0.00 0.00 36.89 2.92
4061 4267 7.982761 ATTTTGTGTGGCAATAAAACATCAT 57.017 28.000 6.86 0.00 36.89 2.45
4062 4268 7.798596 AATTTTGTGTGGCAATAAAACATCA 57.201 28.000 6.86 0.00 36.89 3.07
4063 4269 8.341173 TGAAATTTTGTGTGGCAATAAAACATC 58.659 29.630 6.86 8.42 36.89 3.06
4064 4270 8.218338 TGAAATTTTGTGTGGCAATAAAACAT 57.782 26.923 6.86 1.25 36.89 2.71
4065 4271 7.615582 TGAAATTTTGTGTGGCAATAAAACA 57.384 28.000 6.86 0.00 36.89 2.83
4066 4272 8.902040 TTTGAAATTTTGTGTGGCAATAAAAC 57.098 26.923 6.86 0.00 36.89 2.43
4072 4278 9.346725 GTTTTAATTTGAAATTTTGTGTGGCAA 57.653 25.926 8.60 0.00 34.87 4.52
4073 4279 8.514594 TGTTTTAATTTGAAATTTTGTGTGGCA 58.485 25.926 8.60 0.00 0.00 4.92
4074 4280 8.793472 GTGTTTTAATTTGAAATTTTGTGTGGC 58.207 29.630 8.60 0.00 0.00 5.01
4075 4281 9.831737 TGTGTTTTAATTTGAAATTTTGTGTGG 57.168 25.926 8.60 0.00 0.00 4.17
4099 4305 8.565896 TTTTCATAGCTCACATCTTGTAATGT 57.434 30.769 0.00 0.00 40.49 2.71
4100 4306 9.499585 CTTTTTCATAGCTCACATCTTGTAATG 57.500 33.333 0.00 0.00 0.00 1.90
4101 4307 9.453572 TCTTTTTCATAGCTCACATCTTGTAAT 57.546 29.630 0.00 0.00 0.00 1.89
4102 4308 8.721478 GTCTTTTTCATAGCTCACATCTTGTAA 58.279 33.333 0.00 0.00 0.00 2.41
4103 4309 7.877612 TGTCTTTTTCATAGCTCACATCTTGTA 59.122 33.333 0.00 0.00 0.00 2.41
4104 4310 6.712095 TGTCTTTTTCATAGCTCACATCTTGT 59.288 34.615 0.00 0.00 0.00 3.16
4105 4311 7.137490 TGTCTTTTTCATAGCTCACATCTTG 57.863 36.000 0.00 0.00 0.00 3.02
4106 4312 7.750229 TTGTCTTTTTCATAGCTCACATCTT 57.250 32.000 0.00 0.00 0.00 2.40
4107 4313 7.750229 TTTGTCTTTTTCATAGCTCACATCT 57.250 32.000 0.00 0.00 0.00 2.90
4108 4314 8.976986 ATTTTGTCTTTTTCATAGCTCACATC 57.023 30.769 0.00 0.00 0.00 3.06
4109 4315 8.579006 TGATTTTGTCTTTTTCATAGCTCACAT 58.421 29.630 0.00 0.00 0.00 3.21
4110 4316 7.939782 TGATTTTGTCTTTTTCATAGCTCACA 58.060 30.769 0.00 0.00 0.00 3.58
4111 4317 7.061557 GCTGATTTTGTCTTTTTCATAGCTCAC 59.938 37.037 0.00 0.00 0.00 3.51
4112 4318 7.086376 GCTGATTTTGTCTTTTTCATAGCTCA 58.914 34.615 0.00 0.00 0.00 4.26
4113 4319 6.250104 CGCTGATTTTGTCTTTTTCATAGCTC 59.750 38.462 0.00 0.00 0.00 4.09
4114 4320 6.088824 CGCTGATTTTGTCTTTTTCATAGCT 58.911 36.000 0.00 0.00 0.00 3.32
4115 4321 5.858581 ACGCTGATTTTGTCTTTTTCATAGC 59.141 36.000 0.00 0.00 0.00 2.97
4116 4322 7.591057 TCAACGCTGATTTTGTCTTTTTCATAG 59.409 33.333 0.00 0.00 0.00 2.23
4117 4323 7.378461 GTCAACGCTGATTTTGTCTTTTTCATA 59.622 33.333 0.00 0.00 33.05 2.15
4118 4324 6.198966 GTCAACGCTGATTTTGTCTTTTTCAT 59.801 34.615 0.00 0.00 33.05 2.57
4119 4325 5.514914 GTCAACGCTGATTTTGTCTTTTTCA 59.485 36.000 0.00 0.00 33.05 2.69
4120 4326 5.743872 AGTCAACGCTGATTTTGTCTTTTTC 59.256 36.000 0.00 0.00 33.05 2.29
4121 4327 5.650543 AGTCAACGCTGATTTTGTCTTTTT 58.349 33.333 0.00 0.00 33.05 1.94
4122 4328 5.248870 AGTCAACGCTGATTTTGTCTTTT 57.751 34.783 0.00 0.00 33.05 2.27
4123 4329 4.900635 AGTCAACGCTGATTTTGTCTTT 57.099 36.364 0.00 0.00 33.05 2.52
4124 4330 5.050091 CACTAGTCAACGCTGATTTTGTCTT 60.050 40.000 0.00 0.00 33.05 3.01
4125 4331 4.449068 CACTAGTCAACGCTGATTTTGTCT 59.551 41.667 0.00 0.00 33.05 3.41
4126 4332 4.702392 CACTAGTCAACGCTGATTTTGTC 58.298 43.478 0.00 0.00 33.05 3.18
4127 4333 3.058914 GCACTAGTCAACGCTGATTTTGT 60.059 43.478 0.00 0.00 33.05 2.83
4128 4334 3.482786 GCACTAGTCAACGCTGATTTTG 58.517 45.455 0.00 0.00 33.05 2.44
4129 4335 2.484264 GGCACTAGTCAACGCTGATTTT 59.516 45.455 0.00 0.00 33.05 1.82
4130 4336 2.076863 GGCACTAGTCAACGCTGATTT 58.923 47.619 0.00 0.00 33.05 2.17
4131 4337 1.001974 TGGCACTAGTCAACGCTGATT 59.998 47.619 0.00 0.00 33.05 2.57
4132 4338 0.608130 TGGCACTAGTCAACGCTGAT 59.392 50.000 0.00 0.00 33.05 2.90
4133 4339 0.391228 TTGGCACTAGTCAACGCTGA 59.609 50.000 0.00 0.00 33.69 4.26
4134 4340 1.225855 TTTGGCACTAGTCAACGCTG 58.774 50.000 0.00 0.00 39.46 5.18
4135 4341 2.185004 ATTTGGCACTAGTCAACGCT 57.815 45.000 0.00 0.00 39.46 5.07
4136 4342 3.000727 ACTATTTGGCACTAGTCAACGC 58.999 45.455 0.00 0.00 39.46 4.84
4137 4343 6.312918 ACATTACTATTTGGCACTAGTCAACG 59.687 38.462 11.15 3.99 39.46 4.10
4138 4344 7.333423 TGACATTACTATTTGGCACTAGTCAAC 59.667 37.037 11.15 0.00 39.46 3.18
4139 4345 7.333423 GTGACATTACTATTTGGCACTAGTCAA 59.667 37.037 11.15 0.00 46.28 3.18
4140 4346 6.816640 GTGACATTACTATTTGGCACTAGTCA 59.183 38.462 11.15 3.27 46.28 3.41
4141 4347 7.235430 GTGACATTACTATTTGGCACTAGTC 57.765 40.000 11.15 0.00 46.28 2.59
4153 4359 6.554982 TCAGCCCTGAATAGTGACATTACTAT 59.445 38.462 0.00 0.00 43.77 2.12
4154 4360 5.897250 TCAGCCCTGAATAGTGACATTACTA 59.103 40.000 0.00 0.00 36.53 1.82
4155 4361 4.716784 TCAGCCCTGAATAGTGACATTACT 59.283 41.667 0.00 0.00 36.53 2.24
4156 4362 5.023533 TCAGCCCTGAATAGTGACATTAC 57.976 43.478 0.00 0.00 36.53 1.89
4157 4363 5.692115 TTCAGCCCTGAATAGTGACATTA 57.308 39.130 6.62 0.00 43.90 1.90
4158 4364 4.574674 TTCAGCCCTGAATAGTGACATT 57.425 40.909 6.62 0.00 43.90 2.71
4169 4375 4.648762 TGAAAAAGACAAATTCAGCCCTGA 59.351 37.500 0.00 0.00 37.91 3.86
4170 4376 4.947645 TGAAAAAGACAAATTCAGCCCTG 58.052 39.130 0.00 0.00 0.00 4.45
4171 4377 5.813513 ATGAAAAAGACAAATTCAGCCCT 57.186 34.783 0.00 0.00 36.59 5.19


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.