Multiple sequence alignment - TraesCS4A01G409700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G409700 chr4A 100.000 5785 0 0 1 5785 682980334 682986118 0.000000e+00 10683.0
1 TraesCS4A01G409700 chr4A 96.945 1375 38 2 1660 3034 51133348 51134718 0.000000e+00 2303.0
2 TraesCS4A01G409700 chr4A 97.884 189 4 0 3033 3221 51134842 51135030 1.550000e-85 327.0
3 TraesCS4A01G409700 chr4D 89.995 1869 117 33 2235 4075 475873883 475875709 0.000000e+00 2351.0
4 TraesCS4A01G409700 chr4D 92.596 1094 54 7 4145 5219 475875711 475876796 0.000000e+00 1546.0
5 TraesCS4A01G409700 chr4D 95.723 795 21 8 779 1566 475872413 475873201 0.000000e+00 1267.0
6 TraesCS4A01G409700 chr4D 96.167 574 18 1 5212 5785 475876872 475877441 0.000000e+00 935.0
7 TraesCS4A01G409700 chr4D 93.625 251 14 2 233 482 475872176 475872425 1.970000e-99 374.0
8 TraesCS4A01G409700 chr4D 87.805 287 33 2 486 770 208562622 208562336 9.290000e-88 335.0
9 TraesCS4A01G409700 chr4D 91.093 247 9 2 1 234 475871896 475872142 7.230000e-84 322.0
10 TraesCS4A01G409700 chr4B 91.481 1526 86 20 2235 3733 600293140 600294648 0.000000e+00 2058.0
11 TraesCS4A01G409700 chr4B 93.962 795 36 7 779 1566 600290420 600291209 0.000000e+00 1192.0
12 TraesCS4A01G409700 chr4B 90.978 787 54 9 4144 4928 600295335 600296106 0.000000e+00 1044.0
13 TraesCS4A01G409700 chr4B 85.193 466 42 14 3612 4076 600294896 600295335 2.460000e-123 453.0
14 TraesCS4A01G409700 chr4B 89.781 274 22 3 5379 5652 600299691 600299958 4.290000e-91 346.0
15 TraesCS4A01G409700 chr4B 90.625 256 17 4 233 482 600290178 600290432 3.340000e-87 333.0
16 TraesCS4A01G409700 chr4B 87.719 285 33 2 488 770 145794206 145793922 1.200000e-86 331.0
17 TraesCS4A01G409700 chr4B 89.600 250 12 3 1 236 600289898 600290147 7.280000e-79 305.0
18 TraesCS4A01G409700 chr4B 96.610 59 2 0 4926 4984 600299050 600299108 1.330000e-16 99.0
19 TraesCS4A01G409700 chr2A 86.928 306 31 9 486 782 7915464 7915769 9.290000e-88 335.0
20 TraesCS4A01G409700 chr2A 98.113 53 1 0 3839 3891 192192104 192192052 6.170000e-15 93.5
21 TraesCS4A01G409700 chr5D 86.842 304 33 7 486 782 433503248 433502945 3.340000e-87 333.0
22 TraesCS4A01G409700 chr5D 86.644 292 37 2 484 773 521864292 521864001 7.230000e-84 322.0
23 TraesCS4A01G409700 chr5D 85.714 308 35 9 482 781 536022030 536022336 3.360000e-82 316.0
24 TraesCS4A01G409700 chr5D 82.432 74 11 2 5713 5785 482538026 482537954 4.840000e-06 63.9
25 TraesCS4A01G409700 chr7D 87.368 285 34 2 488 770 613016551 613016267 5.590000e-85 326.0
26 TraesCS4A01G409700 chr2D 85.897 312 36 8 476 779 632808383 632808694 5.590000e-85 326.0
27 TraesCS4A01G409700 chr1B 85.902 305 34 9 484 780 405665701 405666004 3.360000e-82 316.0
28 TraesCS4A01G409700 chr5B 96.970 33 1 0 5713 5745 461559105 461559137 8.100000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G409700 chr4A 682980334 682986118 5784 False 10683.00 10683 100.000000 1 5785 1 chr4A.!!$F1 5784
1 TraesCS4A01G409700 chr4A 51133348 51135030 1682 False 1315.00 2303 97.414500 1660 3221 2 chr4A.!!$F2 1561
2 TraesCS4A01G409700 chr4D 475871896 475877441 5545 False 1132.50 2351 93.199833 1 5785 6 chr4D.!!$F1 5784
3 TraesCS4A01G409700 chr4B 600289898 600299958 10060 False 728.75 2058 91.028750 1 5652 8 chr4B.!!$F1 5651

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
735 791 0.036022 TGTGTGCGTTCATGGGATGA 59.964 50.000 0.00 0.00 37.55 2.92 F
737 793 0.324614 TGTGCGTTCATGGGATGAGT 59.675 50.000 0.00 0.00 40.94 3.41 F
747 803 0.966179 TGGGATGAGTATATGCGCGT 59.034 50.000 8.43 7.55 0.00 6.01 F
1233 1296 1.306141 ATTCCTCCTCACCGGCTCA 60.306 57.895 0.00 0.00 0.00 4.26 F
1603 1666 1.324005 GGAGAGCTCCGCACCTACTT 61.324 60.000 10.93 0.00 40.36 2.24 F
1958 3238 2.120232 CGCTTGCTCTACCTTATGTCG 58.880 52.381 0.00 0.00 0.00 4.35 F
3690 5495 2.225491 TGCAACTTTATCCTTGCGTGTC 59.775 45.455 0.00 0.00 44.84 3.67 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1573 1636 1.140452 GGAGCTCTCCTGCATGATTCA 59.860 52.381 14.64 0.00 46.16 2.57 R
1574 1637 1.881591 GGAGCTCTCCTGCATGATTC 58.118 55.000 14.64 0.00 46.16 2.52 R
1954 3234 2.191815 TTTTTCTCGACGACACGACA 57.808 45.000 0.00 0.00 37.37 4.35 R
2322 3719 2.486982 CTCAACAAGCCTGAACATGAGG 59.513 50.000 0.00 0.00 31.50 3.86 R
3570 5131 1.728971 CTTTCTACAAGTGCTCCGCAG 59.271 52.381 0.00 0.00 40.08 5.18 R
3810 5730 0.390860 ACGTTCAGAGCTCTTGCAGT 59.609 50.000 15.27 9.59 42.74 4.40 R
5103 9994 0.173708 AAGAAAAACCGCACGCCAAA 59.826 45.000 0.00 0.00 0.00 3.28 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
57 58 1.212935 AGGAGTGCAGAAGGTGTGTTT 59.787 47.619 0.00 0.00 0.00 2.83
100 113 4.267928 CCACAAGTCGATTCCGTAAATCTC 59.732 45.833 0.00 1.26 41.46 2.75
101 114 4.862574 CACAAGTCGATTCCGTAAATCTCA 59.137 41.667 0.00 0.00 41.46 3.27
249 299 5.719085 ACTGTGGAAGAGATGATGAAGTACT 59.281 40.000 0.00 0.00 0.00 2.73
482 538 4.395959 TCGTATCTAAAGGCGGATGTTT 57.604 40.909 0.00 0.00 0.00 2.83
483 539 5.518848 TCGTATCTAAAGGCGGATGTTTA 57.481 39.130 0.00 0.00 0.00 2.01
484 540 6.092955 TCGTATCTAAAGGCGGATGTTTAT 57.907 37.500 0.00 0.00 0.00 1.40
485 541 5.924254 TCGTATCTAAAGGCGGATGTTTATG 59.076 40.000 0.00 0.00 0.00 1.90
486 542 5.389516 CGTATCTAAAGGCGGATGTTTATGC 60.390 44.000 0.00 0.00 0.00 3.14
495 551 3.840890 GGATGTTTATGCGAACCAACA 57.159 42.857 0.00 0.00 33.78 3.33
496 552 4.370364 GGATGTTTATGCGAACCAACAT 57.630 40.909 2.22 2.22 41.51 2.71
497 553 4.104776 GGATGTTTATGCGAACCAACATG 58.895 43.478 6.73 0.00 39.43 3.21
498 554 4.380444 GGATGTTTATGCGAACCAACATGT 60.380 41.667 6.73 0.00 39.43 3.21
499 555 3.894920 TGTTTATGCGAACCAACATGTG 58.105 40.909 0.00 0.00 0.00 3.21
515 571 4.517285 ACATGTGGTTGTATAGCAAGAGG 58.483 43.478 0.00 0.00 37.83 3.69
516 572 3.627395 TGTGGTTGTATAGCAAGAGGG 57.373 47.619 0.00 0.00 37.83 4.30
517 573 2.238646 TGTGGTTGTATAGCAAGAGGGG 59.761 50.000 0.00 0.00 37.83 4.79
518 574 1.211949 TGGTTGTATAGCAAGAGGGGC 59.788 52.381 0.00 0.00 37.83 5.80
519 575 1.490910 GGTTGTATAGCAAGAGGGGCT 59.509 52.381 0.00 0.00 45.18 5.19
520 576 2.704065 GGTTGTATAGCAAGAGGGGCTA 59.296 50.000 0.00 0.00 46.86 3.93
524 580 3.654876 TAGCAAGAGGGGCTATGGT 57.345 52.632 0.00 0.00 42.62 3.55
525 581 2.787339 TAGCAAGAGGGGCTATGGTA 57.213 50.000 0.00 0.00 42.62 3.25
526 582 2.124560 AGCAAGAGGGGCTATGGTAT 57.875 50.000 0.00 0.00 40.47 2.73
527 583 1.981495 AGCAAGAGGGGCTATGGTATC 59.019 52.381 0.00 0.00 40.47 2.24
528 584 1.003696 GCAAGAGGGGCTATGGTATCC 59.996 57.143 0.00 0.00 0.00 2.59
529 585 1.630878 CAAGAGGGGCTATGGTATCCC 59.369 57.143 0.00 0.00 39.67 3.85
531 587 1.203364 AGAGGGGCTATGGTATCCCAG 60.203 57.143 0.00 0.00 46.15 4.45
532 588 0.842467 AGGGGCTATGGTATCCCAGC 60.842 60.000 0.00 0.00 46.15 4.85
533 589 1.685820 GGGCTATGGTATCCCAGCC 59.314 63.158 15.67 15.67 46.15 4.85
534 590 1.685820 GGCTATGGTATCCCAGCCC 59.314 63.158 13.97 0.00 46.15 5.19
535 591 1.133809 GGCTATGGTATCCCAGCCCA 61.134 60.000 13.97 0.00 46.15 5.36
536 592 0.995024 GCTATGGTATCCCAGCCCAT 59.005 55.000 0.00 0.00 46.15 4.00
537 593 1.355720 GCTATGGTATCCCAGCCCATT 59.644 52.381 0.00 0.00 46.15 3.16
538 594 2.576191 GCTATGGTATCCCAGCCCATTA 59.424 50.000 0.00 0.00 46.15 1.90
539 595 3.370953 GCTATGGTATCCCAGCCCATTAG 60.371 52.174 0.00 0.00 46.15 1.73
540 596 1.444933 TGGTATCCCAGCCCATTAGG 58.555 55.000 0.00 0.00 35.17 2.69
553 609 3.498774 CCATTAGGGTTCAGATCCTGG 57.501 52.381 3.68 0.00 34.75 4.45
554 610 2.780010 CCATTAGGGTTCAGATCCTGGT 59.220 50.000 0.00 0.00 34.75 4.00
555 611 3.434167 CCATTAGGGTTCAGATCCTGGTG 60.434 52.174 0.00 2.97 34.75 4.17
556 612 1.204146 TAGGGTTCAGATCCTGGTGC 58.796 55.000 0.00 0.00 34.75 5.01
557 613 0.548682 AGGGTTCAGATCCTGGTGCT 60.549 55.000 0.00 0.00 31.51 4.40
558 614 0.107459 GGGTTCAGATCCTGGTGCTC 60.107 60.000 0.00 0.00 31.51 4.26
559 615 0.460987 GGTTCAGATCCTGGTGCTCG 60.461 60.000 0.00 0.00 31.51 5.03
560 616 1.086634 GTTCAGATCCTGGTGCTCGC 61.087 60.000 0.00 0.00 31.51 5.03
561 617 1.543944 TTCAGATCCTGGTGCTCGCA 61.544 55.000 0.00 0.00 31.51 5.10
562 618 1.145598 CAGATCCTGGTGCTCGCAT 59.854 57.895 0.00 0.00 0.00 4.73
563 619 0.463295 CAGATCCTGGTGCTCGCATT 60.463 55.000 0.00 0.00 0.00 3.56
564 620 0.254178 AGATCCTGGTGCTCGCATTT 59.746 50.000 0.00 0.00 0.00 2.32
565 621 1.486310 AGATCCTGGTGCTCGCATTTA 59.514 47.619 0.00 0.00 0.00 1.40
566 622 2.105477 AGATCCTGGTGCTCGCATTTAT 59.895 45.455 0.00 0.00 0.00 1.40
567 623 2.418368 TCCTGGTGCTCGCATTTATT 57.582 45.000 0.00 0.00 0.00 1.40
568 624 2.722094 TCCTGGTGCTCGCATTTATTT 58.278 42.857 0.00 0.00 0.00 1.40
569 625 2.682856 TCCTGGTGCTCGCATTTATTTC 59.317 45.455 0.00 0.00 0.00 2.17
570 626 2.684881 CCTGGTGCTCGCATTTATTTCT 59.315 45.455 0.00 0.00 0.00 2.52
571 627 3.488047 CCTGGTGCTCGCATTTATTTCTG 60.488 47.826 0.00 0.00 0.00 3.02
572 628 2.423185 TGGTGCTCGCATTTATTTCTGG 59.577 45.455 0.00 0.00 0.00 3.86
573 629 2.682856 GGTGCTCGCATTTATTTCTGGA 59.317 45.455 0.00 0.00 0.00 3.86
574 630 3.316308 GGTGCTCGCATTTATTTCTGGAT 59.684 43.478 0.00 0.00 0.00 3.41
575 631 4.202050 GGTGCTCGCATTTATTTCTGGATT 60.202 41.667 0.00 0.00 0.00 3.01
576 632 5.343249 GTGCTCGCATTTATTTCTGGATTT 58.657 37.500 0.00 0.00 0.00 2.17
577 633 6.459573 GGTGCTCGCATTTATTTCTGGATTTA 60.460 38.462 0.00 0.00 0.00 1.40
578 634 7.141363 GTGCTCGCATTTATTTCTGGATTTAT 58.859 34.615 0.00 0.00 0.00 1.40
579 635 7.649306 GTGCTCGCATTTATTTCTGGATTTATT 59.351 33.333 0.00 0.00 0.00 1.40
580 636 8.196771 TGCTCGCATTTATTTCTGGATTTATTT 58.803 29.630 0.00 0.00 0.00 1.40
581 637 8.694394 GCTCGCATTTATTTCTGGATTTATTTC 58.306 33.333 0.00 0.00 0.00 2.17
582 638 9.956720 CTCGCATTTATTTCTGGATTTATTTCT 57.043 29.630 0.00 0.00 0.00 2.52
583 639 9.734620 TCGCATTTATTTCTGGATTTATTTCTG 57.265 29.630 0.00 0.00 0.00 3.02
584 640 8.971321 CGCATTTATTTCTGGATTTATTTCTGG 58.029 33.333 0.00 0.00 0.00 3.86
591 647 9.807649 ATTTCTGGATTTATTTCTGGATTTTCG 57.192 29.630 0.00 0.00 0.00 3.46
592 648 7.333528 TCTGGATTTATTTCTGGATTTTCGG 57.666 36.000 0.00 0.00 0.00 4.30
593 649 5.901552 TGGATTTATTTCTGGATTTTCGGC 58.098 37.500 0.00 0.00 0.00 5.54
594 650 4.976116 GGATTTATTTCTGGATTTTCGGCG 59.024 41.667 0.00 0.00 0.00 6.46
595 651 5.220970 GGATTTATTTCTGGATTTTCGGCGA 60.221 40.000 4.99 4.99 0.00 5.54
596 652 5.828299 TTTATTTCTGGATTTTCGGCGAT 57.172 34.783 11.76 0.00 0.00 4.58
597 653 3.698029 ATTTCTGGATTTTCGGCGATG 57.302 42.857 11.76 0.00 0.00 3.84
598 654 0.732571 TTCTGGATTTTCGGCGATGC 59.267 50.000 11.76 1.12 0.00 3.91
599 655 1.010797 CTGGATTTTCGGCGATGCG 60.011 57.895 11.76 0.00 0.00 4.73
610 666 4.620437 CGATGCGCATTCAATGGG 57.380 55.556 26.12 10.08 45.06 4.00
611 667 2.024117 CGATGCGCATTCAATGGGA 58.976 52.632 26.12 4.11 45.09 4.37
612 668 0.040692 CGATGCGCATTCAATGGGAG 60.041 55.000 26.12 4.12 45.09 4.30
613 669 0.313043 GATGCGCATTCAATGGGAGG 59.687 55.000 26.12 0.00 45.09 4.30
614 670 1.111116 ATGCGCATTCAATGGGAGGG 61.111 55.000 19.28 0.00 45.09 4.30
615 671 2.492773 GCGCATTCAATGGGAGGGG 61.493 63.158 18.25 0.00 45.09 4.79
616 672 1.227102 CGCATTCAATGGGAGGGGA 59.773 57.895 8.78 0.00 45.09 4.81
617 673 1.103398 CGCATTCAATGGGAGGGGAC 61.103 60.000 8.78 0.00 45.09 4.46
618 674 1.103398 GCATTCAATGGGAGGGGACG 61.103 60.000 0.00 0.00 0.00 4.79
619 675 0.255890 CATTCAATGGGAGGGGACGT 59.744 55.000 0.00 0.00 0.00 4.34
620 676 0.999712 ATTCAATGGGAGGGGACGTT 59.000 50.000 0.00 0.00 0.00 3.99
621 677 0.326927 TTCAATGGGAGGGGACGTTC 59.673 55.000 0.00 0.00 0.00 3.95
622 678 0.546747 TCAATGGGAGGGGACGTTCT 60.547 55.000 0.00 0.00 0.00 3.01
623 679 0.107654 CAATGGGAGGGGACGTTCTC 60.108 60.000 0.00 0.00 0.00 2.87
624 680 1.614241 AATGGGAGGGGACGTTCTCG 61.614 60.000 0.00 0.00 43.34 4.04
649 705 2.503375 CGAGGTGCGTACGGTGAC 60.503 66.667 18.39 0.00 34.64 3.67
650 706 2.960170 GAGGTGCGTACGGTGACT 59.040 61.111 18.39 0.00 0.00 3.41
651 707 1.288127 GAGGTGCGTACGGTGACTT 59.712 57.895 18.39 0.00 0.00 3.01
652 708 0.731855 GAGGTGCGTACGGTGACTTC 60.732 60.000 18.39 0.00 0.00 3.01
653 709 1.007038 GGTGCGTACGGTGACTTCA 60.007 57.895 18.39 1.01 0.00 3.02
654 710 0.389426 GGTGCGTACGGTGACTTCAT 60.389 55.000 18.39 0.00 0.00 2.57
655 711 1.135315 GGTGCGTACGGTGACTTCATA 60.135 52.381 18.39 0.00 0.00 2.15
656 712 2.598589 GTGCGTACGGTGACTTCATAA 58.401 47.619 18.39 0.00 0.00 1.90
657 713 2.988493 GTGCGTACGGTGACTTCATAAA 59.012 45.455 18.39 0.00 0.00 1.40
658 714 3.615496 GTGCGTACGGTGACTTCATAAAT 59.385 43.478 18.39 0.00 0.00 1.40
659 715 4.092383 GTGCGTACGGTGACTTCATAAATT 59.908 41.667 18.39 0.00 0.00 1.82
660 716 4.691685 TGCGTACGGTGACTTCATAAATTT 59.308 37.500 18.39 0.00 0.00 1.82
661 717 5.163933 TGCGTACGGTGACTTCATAAATTTC 60.164 40.000 18.39 0.00 0.00 2.17
662 718 5.163933 GCGTACGGTGACTTCATAAATTTCA 60.164 40.000 18.39 0.00 0.00 2.69
663 719 6.619018 GCGTACGGTGACTTCATAAATTTCAA 60.619 38.462 18.39 0.00 0.00 2.69
664 720 6.953743 CGTACGGTGACTTCATAAATTTCAAG 59.046 38.462 7.57 0.00 0.00 3.02
665 721 7.148705 CGTACGGTGACTTCATAAATTTCAAGA 60.149 37.037 7.57 0.00 0.00 3.02
666 722 6.899114 ACGGTGACTTCATAAATTTCAAGAC 58.101 36.000 0.00 0.00 0.00 3.01
667 723 6.015504 CGGTGACTTCATAAATTTCAAGACG 58.984 40.000 0.00 0.00 0.00 4.18
668 724 6.128661 CGGTGACTTCATAAATTTCAAGACGA 60.129 38.462 0.00 0.00 0.00 4.20
669 725 7.413000 CGGTGACTTCATAAATTTCAAGACGAT 60.413 37.037 0.00 0.00 0.00 3.73
670 726 8.879759 GGTGACTTCATAAATTTCAAGACGATA 58.120 33.333 0.00 0.00 0.00 2.92
683 739 4.535425 CGATATGTCGGCTCGGTC 57.465 61.111 3.61 0.00 44.00 4.79
684 740 1.950007 CGATATGTCGGCTCGGTCT 59.050 57.895 3.61 0.00 44.00 3.85
685 741 0.311165 CGATATGTCGGCTCGGTCTT 59.689 55.000 3.61 0.00 44.00 3.01
686 742 1.269102 CGATATGTCGGCTCGGTCTTT 60.269 52.381 3.61 0.00 44.00 2.52
687 743 2.798499 CGATATGTCGGCTCGGTCTTTT 60.798 50.000 3.61 0.00 44.00 2.27
688 744 2.004583 TATGTCGGCTCGGTCTTTTG 57.995 50.000 0.00 0.00 0.00 2.44
689 745 0.673644 ATGTCGGCTCGGTCTTTTGG 60.674 55.000 0.00 0.00 0.00 3.28
690 746 1.005394 GTCGGCTCGGTCTTTTGGA 60.005 57.895 0.00 0.00 0.00 3.53
691 747 1.014564 GTCGGCTCGGTCTTTTGGAG 61.015 60.000 0.00 0.00 0.00 3.86
692 748 1.183030 TCGGCTCGGTCTTTTGGAGA 61.183 55.000 0.00 0.00 0.00 3.71
693 749 0.108138 CGGCTCGGTCTTTTGGAGAT 60.108 55.000 0.00 0.00 36.61 2.75
694 750 1.373570 GGCTCGGTCTTTTGGAGATG 58.626 55.000 0.00 0.00 36.61 2.90
695 751 0.729690 GCTCGGTCTTTTGGAGATGC 59.270 55.000 0.00 0.00 36.61 3.91
696 752 1.677217 GCTCGGTCTTTTGGAGATGCT 60.677 52.381 0.00 0.00 36.61 3.79
697 753 2.275318 CTCGGTCTTTTGGAGATGCTC 58.725 52.381 0.00 0.00 36.61 4.26
698 754 1.002366 CGGTCTTTTGGAGATGCTCG 58.998 55.000 0.00 0.00 36.61 5.03
699 755 1.673033 CGGTCTTTTGGAGATGCTCGT 60.673 52.381 0.00 0.00 36.61 4.18
700 756 2.416836 CGGTCTTTTGGAGATGCTCGTA 60.417 50.000 0.00 0.00 36.61 3.43
701 757 3.190874 GGTCTTTTGGAGATGCTCGTAG 58.809 50.000 0.00 0.00 36.61 3.51
702 758 3.190874 GTCTTTTGGAGATGCTCGTAGG 58.809 50.000 0.00 0.00 36.61 3.18
703 759 2.168521 TCTTTTGGAGATGCTCGTAGGG 59.831 50.000 0.00 0.00 0.00 3.53
704 760 1.860641 TTTGGAGATGCTCGTAGGGA 58.139 50.000 0.00 0.00 0.00 4.20
705 761 2.088104 TTGGAGATGCTCGTAGGGAT 57.912 50.000 0.00 0.00 0.00 3.85
706 762 2.971901 TGGAGATGCTCGTAGGGATA 57.028 50.000 0.00 0.00 0.00 2.59
707 763 2.796557 TGGAGATGCTCGTAGGGATAG 58.203 52.381 0.00 0.00 0.00 2.08
708 764 2.375509 TGGAGATGCTCGTAGGGATAGA 59.624 50.000 0.00 0.00 0.00 1.98
709 765 3.181433 TGGAGATGCTCGTAGGGATAGAA 60.181 47.826 0.00 0.00 0.00 2.10
710 766 4.020543 GGAGATGCTCGTAGGGATAGAAT 58.979 47.826 0.00 0.00 0.00 2.40
711 767 4.142271 GGAGATGCTCGTAGGGATAGAATG 60.142 50.000 0.00 0.00 0.00 2.67
712 768 4.411927 AGATGCTCGTAGGGATAGAATGT 58.588 43.478 0.00 0.00 0.00 2.71
713 769 5.571285 AGATGCTCGTAGGGATAGAATGTA 58.429 41.667 0.00 0.00 0.00 2.29
714 770 5.416326 AGATGCTCGTAGGGATAGAATGTAC 59.584 44.000 0.00 0.00 0.00 2.90
715 771 3.501062 TGCTCGTAGGGATAGAATGTACG 59.499 47.826 0.00 0.00 38.23 3.67
716 772 3.501445 GCTCGTAGGGATAGAATGTACGT 59.499 47.826 0.00 0.00 38.10 3.57
717 773 4.613167 GCTCGTAGGGATAGAATGTACGTG 60.613 50.000 0.00 0.00 38.10 4.49
718 774 4.454678 TCGTAGGGATAGAATGTACGTGT 58.545 43.478 0.00 0.00 38.10 4.49
719 775 4.274214 TCGTAGGGATAGAATGTACGTGTG 59.726 45.833 0.00 0.00 38.10 3.82
720 776 4.036027 CGTAGGGATAGAATGTACGTGTGT 59.964 45.833 0.00 0.00 33.47 3.72
721 777 4.386867 AGGGATAGAATGTACGTGTGTG 57.613 45.455 0.00 0.00 0.00 3.82
722 778 2.864343 GGGATAGAATGTACGTGTGTGC 59.136 50.000 0.00 0.00 0.00 4.57
723 779 2.534349 GGATAGAATGTACGTGTGTGCG 59.466 50.000 0.00 0.00 32.77 5.34
725 781 1.860676 AGAATGTACGTGTGTGCGTT 58.139 45.000 0.00 0.00 43.04 4.84
726 782 2.207041 GAATGTACGTGTGTGCGTTC 57.793 50.000 0.00 3.36 45.25 3.95
727 783 1.573026 AATGTACGTGTGTGCGTTCA 58.427 45.000 0.00 0.00 43.04 3.18
728 784 1.790755 ATGTACGTGTGTGCGTTCAT 58.209 45.000 0.00 5.22 43.72 2.57
729 785 0.855995 TGTACGTGTGTGCGTTCATG 59.144 50.000 0.00 0.00 43.04 3.07
730 786 0.162933 GTACGTGTGTGCGTTCATGG 59.837 55.000 0.00 0.00 43.04 3.66
731 787 0.946700 TACGTGTGTGCGTTCATGGG 60.947 55.000 0.00 0.00 43.04 4.00
732 788 1.958715 CGTGTGTGCGTTCATGGGA 60.959 57.895 0.00 0.00 0.00 4.37
733 789 1.298157 CGTGTGTGCGTTCATGGGAT 61.298 55.000 0.00 0.00 0.00 3.85
734 790 0.168788 GTGTGTGCGTTCATGGGATG 59.831 55.000 0.00 0.00 0.00 3.51
735 791 0.036022 TGTGTGCGTTCATGGGATGA 59.964 50.000 0.00 0.00 37.55 2.92
736 792 0.729116 GTGTGCGTTCATGGGATGAG 59.271 55.000 0.00 0.00 40.94 2.90
737 793 0.324614 TGTGCGTTCATGGGATGAGT 59.675 50.000 0.00 0.00 40.94 3.41
738 794 1.552792 TGTGCGTTCATGGGATGAGTA 59.447 47.619 0.00 0.00 40.94 2.59
739 795 2.170397 TGTGCGTTCATGGGATGAGTAT 59.830 45.455 0.00 0.00 40.94 2.12
740 796 3.386402 TGTGCGTTCATGGGATGAGTATA 59.614 43.478 0.00 0.00 40.94 1.47
741 797 4.040339 TGTGCGTTCATGGGATGAGTATAT 59.960 41.667 0.00 0.00 40.94 0.86
742 798 4.389992 GTGCGTTCATGGGATGAGTATATG 59.610 45.833 0.00 0.00 40.94 1.78
743 799 3.372206 GCGTTCATGGGATGAGTATATGC 59.628 47.826 0.00 0.00 40.94 3.14
744 800 3.614176 CGTTCATGGGATGAGTATATGCG 59.386 47.826 0.00 0.00 40.94 4.73
745 801 3.251479 TCATGGGATGAGTATATGCGC 57.749 47.619 0.00 0.00 33.59 6.09
746 802 1.929169 CATGGGATGAGTATATGCGCG 59.071 52.381 0.00 0.00 0.00 6.86
747 803 0.966179 TGGGATGAGTATATGCGCGT 59.034 50.000 8.43 7.55 0.00 6.01
748 804 1.336795 TGGGATGAGTATATGCGCGTG 60.337 52.381 13.61 0.00 0.00 5.34
749 805 1.336887 GGGATGAGTATATGCGCGTGT 60.337 52.381 13.61 8.52 0.00 4.49
750 806 2.094906 GGGATGAGTATATGCGCGTGTA 60.095 50.000 13.61 7.27 0.00 2.90
751 807 3.428999 GGGATGAGTATATGCGCGTGTAT 60.429 47.826 13.61 9.22 0.00 2.29
752 808 4.201980 GGGATGAGTATATGCGCGTGTATA 60.202 45.833 13.61 9.23 0.00 1.47
753 809 5.507482 GGGATGAGTATATGCGCGTGTATAT 60.507 44.000 20.79 20.79 37.23 0.86
754 810 5.399596 GGATGAGTATATGCGCGTGTATATG 59.600 44.000 24.28 0.00 34.71 1.78
755 811 5.554822 TGAGTATATGCGCGTGTATATGA 57.445 39.130 24.28 9.82 34.71 2.15
756 812 5.569413 TGAGTATATGCGCGTGTATATGAG 58.431 41.667 24.28 0.00 34.71 2.90
757 813 4.352039 AGTATATGCGCGTGTATATGAGC 58.648 43.478 24.28 15.73 38.85 4.26
762 818 2.264207 CGCGTGTATATGAGCGTTTG 57.736 50.000 0.00 0.00 46.48 2.93
763 819 1.653679 CGCGTGTATATGAGCGTTTGC 60.654 52.381 0.00 0.00 46.48 3.68
774 830 3.810148 GCGTTTGCGTCTGTGTTAA 57.190 47.368 0.00 0.00 40.81 2.01
775 831 2.093972 GCGTTTGCGTCTGTGTTAAA 57.906 45.000 0.00 0.00 40.81 1.52
776 832 2.442424 GCGTTTGCGTCTGTGTTAAAA 58.558 42.857 0.00 0.00 40.81 1.52
777 833 2.847133 GCGTTTGCGTCTGTGTTAAAAA 59.153 40.909 0.00 0.00 40.81 1.94
803 859 1.408127 CGGATGTTCATTGGGGCTGTA 60.408 52.381 0.00 0.00 0.00 2.74
823 879 7.934120 GGCTGTAAAATTATAGTCACTCCTGAT 59.066 37.037 0.00 0.00 0.00 2.90
824 880 8.768955 GCTGTAAAATTATAGTCACTCCTGATG 58.231 37.037 0.00 0.00 0.00 3.07
867 923 6.254589 GGATTCATGAACTCAAGAGTAGAACG 59.745 42.308 11.07 0.00 41.58 3.95
961 1024 1.897560 AAGCTTTCCTCTTTCCACGG 58.102 50.000 0.00 0.00 0.00 4.94
1099 1162 1.938596 TCCCTCCTGCTCCTCCTCT 60.939 63.158 0.00 0.00 0.00 3.69
1233 1296 1.306141 ATTCCTCCTCACCGGCTCA 60.306 57.895 0.00 0.00 0.00 4.26
1548 1611 2.284405 ACCCCCGACGGTGATTCT 60.284 61.111 13.94 0.00 33.77 2.40
1566 1629 5.186021 TGATTCTTCTCTCCACACCTACTTC 59.814 44.000 0.00 0.00 0.00 3.01
1567 1630 4.390129 TCTTCTCTCCACACCTACTTCT 57.610 45.455 0.00 0.00 0.00 2.85
1568 1631 4.742012 TCTTCTCTCCACACCTACTTCTT 58.258 43.478 0.00 0.00 0.00 2.52
1569 1632 5.148502 TCTTCTCTCCACACCTACTTCTTT 58.851 41.667 0.00 0.00 0.00 2.52
1570 1633 5.244178 TCTTCTCTCCACACCTACTTCTTTC 59.756 44.000 0.00 0.00 0.00 2.62
1571 1634 4.742012 TCTCTCCACACCTACTTCTTTCT 58.258 43.478 0.00 0.00 0.00 2.52
1572 1635 5.148502 TCTCTCCACACCTACTTCTTTCTT 58.851 41.667 0.00 0.00 0.00 2.52
1573 1636 5.602978 TCTCTCCACACCTACTTCTTTCTTT 59.397 40.000 0.00 0.00 0.00 2.52
1574 1637 5.611374 TCTCCACACCTACTTCTTTCTTTG 58.389 41.667 0.00 0.00 0.00 2.77
1575 1638 5.365605 TCTCCACACCTACTTCTTTCTTTGA 59.634 40.000 0.00 0.00 0.00 2.69
1576 1639 5.996644 TCCACACCTACTTCTTTCTTTGAA 58.003 37.500 0.00 0.00 0.00 2.69
1577 1640 6.601332 TCCACACCTACTTCTTTCTTTGAAT 58.399 36.000 0.00 0.00 0.00 2.57
1578 1641 6.710744 TCCACACCTACTTCTTTCTTTGAATC 59.289 38.462 0.00 0.00 0.00 2.52
1579 1642 6.486657 CCACACCTACTTCTTTCTTTGAATCA 59.513 38.462 0.00 0.00 0.00 2.57
1580 1643 7.175641 CCACACCTACTTCTTTCTTTGAATCAT 59.824 37.037 0.00 0.00 0.00 2.45
1581 1644 8.019669 CACACCTACTTCTTTCTTTGAATCATG 58.980 37.037 0.00 0.00 0.00 3.07
1582 1645 7.025963 CACCTACTTCTTTCTTTGAATCATGC 58.974 38.462 0.00 0.00 0.00 4.06
1583 1646 6.716628 ACCTACTTCTTTCTTTGAATCATGCA 59.283 34.615 0.00 0.00 0.00 3.96
1584 1647 7.094463 ACCTACTTCTTTCTTTGAATCATGCAG 60.094 37.037 0.00 0.00 0.00 4.41
1585 1648 6.022163 ACTTCTTTCTTTGAATCATGCAGG 57.978 37.500 0.00 0.00 0.00 4.85
1586 1649 5.771666 ACTTCTTTCTTTGAATCATGCAGGA 59.228 36.000 2.36 2.36 0.00 3.86
1587 1650 5.892160 TCTTTCTTTGAATCATGCAGGAG 57.108 39.130 7.33 0.00 0.00 3.69
1588 1651 5.563592 TCTTTCTTTGAATCATGCAGGAGA 58.436 37.500 7.33 0.00 0.00 3.71
1589 1652 5.646793 TCTTTCTTTGAATCATGCAGGAGAG 59.353 40.000 7.33 0.08 0.00 3.20
1590 1653 3.276857 TCTTTGAATCATGCAGGAGAGC 58.723 45.455 7.33 0.00 0.00 4.09
1591 1654 3.054582 TCTTTGAATCATGCAGGAGAGCT 60.055 43.478 7.33 0.00 34.99 4.09
1592 1655 2.616634 TGAATCATGCAGGAGAGCTC 57.383 50.000 7.33 5.27 34.99 4.09
1601 1664 2.809010 GGAGAGCTCCGCACCTAC 59.191 66.667 10.93 0.00 40.36 3.18
1602 1665 1.755008 GGAGAGCTCCGCACCTACT 60.755 63.158 10.93 0.00 40.36 2.57
1603 1666 1.324005 GGAGAGCTCCGCACCTACTT 61.324 60.000 10.93 0.00 40.36 2.24
1610 1673 2.608090 GCTCCGCACCTACTTTATGTTC 59.392 50.000 0.00 0.00 0.00 3.18
1632 1706 7.394641 TGTTCTACACAGATCTAGACATTCACT 59.605 37.037 0.00 0.00 0.00 3.41
1633 1707 7.946381 TCTACACAGATCTAGACATTCACTT 57.054 36.000 0.00 0.00 0.00 3.16
1634 1708 7.766283 TCTACACAGATCTAGACATTCACTTG 58.234 38.462 0.00 0.00 0.00 3.16
1635 1709 6.352016 ACACAGATCTAGACATTCACTTGT 57.648 37.500 0.00 0.00 0.00 3.16
1636 1710 6.763355 ACACAGATCTAGACATTCACTTGTT 58.237 36.000 0.00 0.00 0.00 2.83
1637 1711 6.870965 ACACAGATCTAGACATTCACTTGTTC 59.129 38.462 0.00 0.00 0.00 3.18
1638 1712 7.095910 CACAGATCTAGACATTCACTTGTTCT 58.904 38.462 0.00 0.00 0.00 3.01
1651 1725 7.761038 TTCACTTGTTCTACACAGATCTAGA 57.239 36.000 0.00 0.00 36.48 2.43
1781 2864 7.281774 TCTCTTGATTGAATGAGCATAAAGGAC 59.718 37.037 0.00 0.00 0.00 3.85
1782 2865 6.319658 TCTTGATTGAATGAGCATAAAGGACC 59.680 38.462 0.00 0.00 0.00 4.46
1936 3216 8.916062 ACAAAATGTCATGGCAGAATCATATTA 58.084 29.630 6.04 0.00 0.00 0.98
1946 3226 5.142962 GCAGAATCATATTAACGCTTGCTC 58.857 41.667 0.00 0.00 0.00 4.26
1954 3234 7.667557 TCATATTAACGCTTGCTCTACCTTAT 58.332 34.615 0.00 0.00 0.00 1.73
1958 3238 2.120232 CGCTTGCTCTACCTTATGTCG 58.880 52.381 0.00 0.00 0.00 4.35
2087 3370 5.045215 TGGAAATGCGTTACTATTCGGTAG 58.955 41.667 0.00 0.00 36.44 3.18
2149 3432 5.086621 TCCCTCCCTAAAACGTTACTTACT 58.913 41.667 0.00 0.00 0.00 2.24
2292 3689 6.929606 ACTAGTTTTGTTGTAACCTAGAGCTG 59.070 38.462 0.00 0.00 0.00 4.24
2345 3742 4.318332 CTCATGTTCAGGCTTGTTGAGTA 58.682 43.478 0.00 0.00 0.00 2.59
2895 4300 6.824196 TGCATACAAATTATTTACCGGTGAGA 59.176 34.615 19.93 2.64 0.00 3.27
2991 4396 2.288729 CCATGATGCTAATGGTGTCACG 59.711 50.000 0.00 0.00 39.87 4.35
3107 4637 7.485810 TGCATGGCATTATATTATCAAGCATC 58.514 34.615 0.00 0.00 31.71 3.91
3138 4668 6.699575 AGTTTGTCACAGTTATCTTTGCTT 57.300 33.333 0.00 0.00 0.00 3.91
3150 4680 8.870879 CAGTTATCTTTGCTTTACTACTGTACC 58.129 37.037 0.00 0.00 0.00 3.34
3245 4783 6.226787 TGTTTGGGGTTGTAATTGCTTTATG 58.773 36.000 0.00 0.00 0.00 1.90
3246 4784 4.464069 TGGGGTTGTAATTGCTTTATGC 57.536 40.909 0.00 0.00 43.25 3.14
3247 4785 3.196685 TGGGGTTGTAATTGCTTTATGCC 59.803 43.478 0.00 0.00 42.00 4.40
3248 4786 3.450817 GGGGTTGTAATTGCTTTATGCCT 59.549 43.478 0.00 0.00 42.00 4.75
3250 4788 5.487433 GGGTTGTAATTGCTTTATGCCTTT 58.513 37.500 0.00 0.00 42.00 3.11
3251 4789 6.351456 GGGGTTGTAATTGCTTTATGCCTTTA 60.351 38.462 0.00 0.00 42.00 1.85
3258 4796 9.971922 GTAATTGCTTTATGCCTTTATCTGATT 57.028 29.630 0.00 0.00 42.00 2.57
3263 4801 8.786898 TGCTTTATGCCTTTATCTGATTCATAC 58.213 33.333 0.00 0.00 42.00 2.39
3264 4802 9.007901 GCTTTATGCCTTTATCTGATTCATACT 57.992 33.333 0.00 0.00 35.15 2.12
3278 4816 3.415457 TCATACTTGCACACCATCACA 57.585 42.857 0.00 0.00 0.00 3.58
3294 4832 8.099537 ACACCATCACATTATGATAAGATCTCC 58.900 37.037 0.00 0.00 46.96 3.71
3295 4833 8.319881 CACCATCACATTATGATAAGATCTCCT 58.680 37.037 0.00 0.00 46.96 3.69
3296 4834 8.538701 ACCATCACATTATGATAAGATCTCCTC 58.461 37.037 0.00 0.00 46.96 3.71
3384 4933 8.317891 TGTCGAACAACATATATTTGAACACT 57.682 30.769 11.95 0.00 0.00 3.55
3416 4965 6.886459 TCCATTTTAAATCTCTGGAGGTCTTG 59.114 38.462 5.63 0.00 32.39 3.02
3512 5073 7.607607 TGCACTAGAAACATGATATTCAGTGTT 59.392 33.333 23.04 0.00 37.21 3.32
3513 5074 7.907045 GCACTAGAAACATGATATTCAGTGTTG 59.093 37.037 23.04 12.70 37.21 3.33
3523 5084 9.983804 CATGATATTCAGTGTTGATGTATATGC 57.016 33.333 0.00 0.00 32.27 3.14
3555 5116 7.557719 AGTGCATAGTAATTGGCAGAATAAAGT 59.442 33.333 0.00 0.00 36.86 2.66
3570 5131 7.489435 GCAGAATAAAGTAAGGAAAAGAATGGC 59.511 37.037 0.00 0.00 0.00 4.40
3621 5182 4.439776 GCGTGCAAACTAAGTTAAACCTTG 59.560 41.667 0.00 0.00 0.00 3.61
3648 5209 5.401550 CGTACGGTAGATCCTTGTGTTAAA 58.598 41.667 7.57 0.00 0.00 1.52
3654 5459 8.079809 ACGGTAGATCCTTGTGTTAAATTTTTG 58.920 33.333 0.00 0.00 0.00 2.44
3666 5471 8.926710 TGTGTTAAATTTTTGCGGGTATATTTG 58.073 29.630 0.00 0.00 0.00 2.32
3679 5484 7.229707 TGCGGGTATATTTGTATGCAACTTTAT 59.770 33.333 0.00 0.00 33.82 1.40
3690 5495 2.225491 TGCAACTTTATCCTTGCGTGTC 59.775 45.455 0.00 0.00 44.84 3.67
3699 5619 2.412870 TCCTTGCGTGTCAACACTATG 58.587 47.619 11.23 3.46 44.34 2.23
3703 5623 2.839975 TGCGTGTCAACACTATGGAAA 58.160 42.857 11.23 0.00 44.34 3.13
3710 5630 7.218204 GCGTGTCAACACTATGGAAATAAATTC 59.782 37.037 11.23 0.00 44.34 2.17
3716 5636 8.531146 CAACACTATGGAAATAAATTCAGGGTT 58.469 33.333 0.00 0.00 36.28 4.11
3717 5637 8.066612 ACACTATGGAAATAAATTCAGGGTTG 57.933 34.615 0.00 0.00 39.98 3.77
3718 5638 7.893302 ACACTATGGAAATAAATTCAGGGTTGA 59.107 33.333 0.00 0.00 39.98 3.18
3767 5687 6.102897 ACACTATTGTCATACAGGGCTATC 57.897 41.667 0.00 0.00 0.00 2.08
3768 5688 5.164233 CACTATTGTCATACAGGGCTATCG 58.836 45.833 0.00 0.00 0.00 2.92
3769 5689 4.833380 ACTATTGTCATACAGGGCTATCGT 59.167 41.667 0.00 0.00 0.00 3.73
3770 5690 6.008331 ACTATTGTCATACAGGGCTATCGTA 58.992 40.000 0.00 0.00 0.00 3.43
3788 5708 2.901991 TAGGCTAACCCTAACCCCAT 57.098 50.000 0.00 0.00 44.08 4.00
3797 5717 2.926329 ACCCTAACCCCATTCTCATGTT 59.074 45.455 0.00 0.00 0.00 2.71
3810 5730 3.819368 TCTCATGTTGCTTTTCCTGTCA 58.181 40.909 0.00 0.00 0.00 3.58
3814 5734 1.405105 TGTTGCTTTTCCTGTCACTGC 59.595 47.619 0.00 0.00 0.00 4.40
3825 5745 1.000618 CTGTCACTGCAAGAGCTCTGA 59.999 52.381 19.06 7.03 42.74 3.27
3836 5756 4.033014 GCAAGAGCTCTGAACGTTTATACC 59.967 45.833 19.06 0.00 37.91 2.73
3837 5757 5.168569 CAAGAGCTCTGAACGTTTATACCA 58.831 41.667 19.06 0.00 0.00 3.25
3891 5811 9.793259 ATGTCTAACTATTCACTTCCTTTTTGA 57.207 29.630 0.00 0.00 0.00 2.69
3897 5817 8.341892 ACTATTCACTTCCTTTTTGAGATTCC 57.658 34.615 0.00 0.00 0.00 3.01
3915 5835 4.916983 TTCCCAACAGTTCACTTCATTG 57.083 40.909 0.00 0.00 0.00 2.82
3932 5852 5.895636 TCATTGAATTCCTTGTACGCATT 57.104 34.783 2.27 0.00 0.00 3.56
3935 5855 7.151308 TCATTGAATTCCTTGTACGCATTTTT 58.849 30.769 2.27 0.00 0.00 1.94
3942 5862 6.380095 TCCTTGTACGCATTTTTAGTTGTT 57.620 33.333 0.00 0.00 0.00 2.83
3972 5892 8.154420 TCTTTTACCTAACTAGCCAAATACCT 57.846 34.615 0.00 0.00 0.00 3.08
3976 5901 3.118038 CCTAACTAGCCAAATACCTGCCA 60.118 47.826 0.00 0.00 0.00 4.92
3985 5910 4.141959 GCCAAATACCTGCCATAATTGTGT 60.142 41.667 1.26 0.00 0.00 3.72
3986 5911 5.626578 GCCAAATACCTGCCATAATTGTGTT 60.627 40.000 1.26 0.00 0.00 3.32
4024 5949 9.965824 CAGTACATATAACTGTGATGTGTATGA 57.034 33.333 15.28 0.00 39.61 2.15
4028 5953 9.276590 ACATATAACTGTGATGTGTATGATTGG 57.723 33.333 5.79 0.00 32.62 3.16
4029 5954 9.492973 CATATAACTGTGATGTGTATGATTGGA 57.507 33.333 0.00 0.00 0.00 3.53
4030 5955 9.716531 ATATAACTGTGATGTGTATGATTGGAG 57.283 33.333 0.00 0.00 0.00 3.86
4031 5956 4.774124 ACTGTGATGTGTATGATTGGAGG 58.226 43.478 0.00 0.00 0.00 4.30
4032 5957 4.225942 ACTGTGATGTGTATGATTGGAGGT 59.774 41.667 0.00 0.00 0.00 3.85
4033 5958 5.425217 ACTGTGATGTGTATGATTGGAGGTA 59.575 40.000 0.00 0.00 0.00 3.08
4034 5959 6.100279 ACTGTGATGTGTATGATTGGAGGTAT 59.900 38.462 0.00 0.00 0.00 2.73
4035 5960 7.290014 ACTGTGATGTGTATGATTGGAGGTATA 59.710 37.037 0.00 0.00 0.00 1.47
4081 6006 9.923143 TGGAATGGTTCTAATATATACTTGTCG 57.077 33.333 0.00 0.00 0.00 4.35
4082 6007 9.924650 GGAATGGTTCTAATATATACTTGTCGT 57.075 33.333 0.00 0.00 0.00 4.34
4096 6021 7.972832 ATACTTGTCGTGATTTTAGTTCCAA 57.027 32.000 0.00 0.00 0.00 3.53
4097 6022 6.877611 ACTTGTCGTGATTTTAGTTCCAAT 57.122 33.333 0.00 0.00 0.00 3.16
4098 6023 7.272037 ACTTGTCGTGATTTTAGTTCCAATT 57.728 32.000 0.00 0.00 0.00 2.32
4099 6024 7.712797 ACTTGTCGTGATTTTAGTTCCAATTT 58.287 30.769 0.00 0.00 0.00 1.82
4100 6025 7.647715 ACTTGTCGTGATTTTAGTTCCAATTTG 59.352 33.333 0.00 0.00 0.00 2.32
4101 6026 7.265647 TGTCGTGATTTTAGTTCCAATTTGA 57.734 32.000 0.00 0.00 0.00 2.69
4102 6027 7.708051 TGTCGTGATTTTAGTTCCAATTTGAA 58.292 30.769 0.00 0.00 0.00 2.69
4103 6028 7.646130 TGTCGTGATTTTAGTTCCAATTTGAAC 59.354 33.333 13.20 13.20 43.95 3.18
4114 6039 7.743520 GTTCCAATTTGAACTAAAACAACGA 57.256 32.000 13.68 0.00 41.12 3.85
4115 6040 7.606131 GTTCCAATTTGAACTAAAACAACGAC 58.394 34.615 13.68 0.00 41.12 4.34
4116 6041 6.853720 TCCAATTTGAACTAAAACAACGACA 58.146 32.000 0.00 0.00 0.00 4.35
4117 6042 7.313646 TCCAATTTGAACTAAAACAACGACAA 58.686 30.769 0.00 0.00 0.00 3.18
4118 6043 7.486551 TCCAATTTGAACTAAAACAACGACAAG 59.513 33.333 0.00 0.00 0.00 3.16
4119 6044 7.274686 CCAATTTGAACTAAAACAACGACAAGT 59.725 33.333 0.00 0.00 0.00 3.16
4120 6045 8.643752 CAATTTGAACTAAAACAACGACAAGTT 58.356 29.630 0.00 0.00 45.45 2.66
4121 6046 8.751302 ATTTGAACTAAAACAACGACAAGTTT 57.249 26.923 0.00 0.00 42.02 2.66
4122 6047 8.576936 TTTGAACTAAAACAACGACAAGTTTT 57.423 26.923 8.15 8.15 46.30 2.43
4123 6048 8.576936 TTGAACTAAAACAACGACAAGTTTTT 57.423 26.923 8.34 0.00 43.26 1.94
4143 6068 5.952526 TTTTGAAACGGAGGGAGTATTTC 57.047 39.130 0.00 0.00 0.00 2.17
4155 6080 6.465035 GGAGGGAGTATTTCACTAATCTGCAT 60.465 42.308 0.00 0.00 40.54 3.96
4181 6106 7.933577 TGTATACTATGATGGAAGCTCCTTTTG 59.066 37.037 4.17 0.00 37.46 2.44
4183 6108 6.011122 ACTATGATGGAAGCTCCTTTTGAT 57.989 37.500 0.00 0.00 37.46 2.57
4184 6109 7.141758 ACTATGATGGAAGCTCCTTTTGATA 57.858 36.000 0.00 0.00 37.46 2.15
4190 6115 6.916360 TGGAAGCTCCTTTTGATATTGTTT 57.084 33.333 0.00 0.00 37.46 2.83
4191 6116 7.301868 TGGAAGCTCCTTTTGATATTGTTTT 57.698 32.000 0.00 0.00 37.46 2.43
4192 6117 7.153985 TGGAAGCTCCTTTTGATATTGTTTTG 58.846 34.615 0.00 0.00 37.46 2.44
4193 6118 7.154656 GGAAGCTCCTTTTGATATTGTTTTGT 58.845 34.615 0.00 0.00 32.53 2.83
4194 6119 8.303876 GGAAGCTCCTTTTGATATTGTTTTGTA 58.696 33.333 0.00 0.00 32.53 2.41
4195 6120 9.129209 GAAGCTCCTTTTGATATTGTTTTGTAC 57.871 33.333 0.00 0.00 0.00 2.90
4196 6121 8.409358 AGCTCCTTTTGATATTGTTTTGTACT 57.591 30.769 0.00 0.00 0.00 2.73
4197 6122 9.515226 AGCTCCTTTTGATATTGTTTTGTACTA 57.485 29.630 0.00 0.00 0.00 1.82
4247 6173 8.996024 AATGGTGCAAATAAACCTGTATTTAC 57.004 30.769 0.00 0.00 37.36 2.01
4297 6223 2.231716 TCTGTCATCCTTTCTCGGGA 57.768 50.000 0.00 0.00 37.26 5.14
4381 6307 1.466025 AACATGCCCTTGCCACACAG 61.466 55.000 0.00 0.00 36.33 3.66
4415 6341 0.622665 CAGTCCTCTGCAATTCCCCT 59.377 55.000 0.00 0.00 34.79 4.79
4508 6434 1.478510 CGTCTGCTGACCCTAACTGAT 59.521 52.381 17.01 0.00 39.94 2.90
4523 6449 2.503331 ACTGATGCGGAAAACATGACA 58.497 42.857 0.00 0.00 0.00 3.58
4544 6470 2.670934 AGCAGTGCAGCTTTCGGG 60.671 61.111 19.20 0.00 43.70 5.14
4598 6524 2.879026 CCACATCGACGAGGAGATTCTA 59.121 50.000 17.43 0.00 0.00 2.10
4601 6527 3.312973 ACATCGACGAGGAGATTCTACAC 59.687 47.826 17.43 0.00 0.00 2.90
4657 6583 0.907704 ATAGGTGCTGGGGACGACAA 60.908 55.000 0.00 0.00 0.00 3.18
4672 6598 3.551846 ACGACAATCCCTGTTCTGTTTT 58.448 40.909 0.00 0.00 38.84 2.43
4733 6659 1.961277 ACTTGCCAAGTTCCTCGCG 60.961 57.895 3.74 0.00 39.04 5.87
4753 6679 2.431454 GCAAAGGCTATCCTATCCAGC 58.569 52.381 0.00 0.00 43.40 4.85
4765 6691 7.064016 GCTATCCTATCCAGCTTTTTATTCTCG 59.936 40.741 0.00 0.00 32.46 4.04
4902 6830 5.662456 CTCCTGATATGATATCCTGTGCAG 58.338 45.833 9.78 0.66 0.00 4.41
4989 9863 0.460109 TTCGGGATCAGCATGTCACG 60.460 55.000 0.00 0.00 41.88 4.35
4998 9872 1.135603 CAGCATGTCACGTGGAAATGG 60.136 52.381 17.00 2.22 40.95 3.16
5110 10001 1.269448 CAATAGGTTGCTGTTTGGCGT 59.731 47.619 0.00 0.00 34.52 5.68
5145 10036 3.254093 TGACTACAAGGAGGGAGAACA 57.746 47.619 0.00 0.00 0.00 3.18
5146 10037 2.897969 TGACTACAAGGAGGGAGAACAC 59.102 50.000 0.00 0.00 0.00 3.32
5219 10111 5.368523 TCATGGATTTAGGGTTAGGGTGTAG 59.631 44.000 0.00 0.00 0.00 2.74
5282 10257 4.514066 CAGTTGCGACCTAAACCTAAAAGT 59.486 41.667 0.00 0.00 0.00 2.66
5284 10259 6.370718 CAGTTGCGACCTAAACCTAAAAGTAT 59.629 38.462 0.00 0.00 0.00 2.12
5366 10342 7.173907 CGCCTTCATATTGGATAGAAAGTGATT 59.826 37.037 0.00 0.00 0.00 2.57
5412 10785 6.098266 AGCAACAAATTAGGAACTTCCAAACT 59.902 34.615 10.57 0.00 39.61 2.66
5467 10840 7.767659 TGAAGTGGTAGATTGATGAAGAATCAG 59.232 37.037 0.00 0.00 46.01 2.90
5599 10972 8.958043 CAGTTTTACTAAGATGTTTGAAAGTGC 58.042 33.333 0.00 0.00 0.00 4.40
5647 11020 8.924511 TTAGAAAGAAAGTGATTTGATGAGGT 57.075 30.769 0.00 0.00 0.00 3.85
5719 11092 6.126796 TGTTTGATATGAAGGCATAGTCTGGA 60.127 38.462 0.00 0.00 40.14 3.86
5720 11093 5.474578 TGATATGAAGGCATAGTCTGGAC 57.525 43.478 0.00 0.00 40.14 4.02
5721 11094 4.901250 TGATATGAAGGCATAGTCTGGACA 59.099 41.667 3.51 0.00 40.14 4.02
5722 11095 5.366477 TGATATGAAGGCATAGTCTGGACAA 59.634 40.000 3.51 0.00 40.14 3.18
5745 11118 1.272536 ACCATGTAGGACTCCGACACT 60.273 52.381 12.78 1.32 41.53 3.55
5750 11123 0.697079 TAGGACTCCGACACTCCTGT 59.303 55.000 0.00 0.00 35.87 4.00
5762 11135 1.808945 CACTCCTGTGCCACTCAAATC 59.191 52.381 0.00 0.00 37.38 2.17
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
46 47 3.366374 GCTCCTATGCAAAACACACCTTC 60.366 47.826 0.00 0.00 0.00 3.46
57 58 1.953559 CTTAAGCGGCTCCTATGCAA 58.046 50.000 1.45 0.00 34.04 4.08
265 315 6.365789 TCCGACGTCGAAGTTTTAACATTTAT 59.634 34.615 37.65 0.00 43.02 1.40
281 331 0.986992 ACGCTAAAAATCCGACGTCG 59.013 50.000 30.33 30.33 39.44 5.12
452 507 3.444388 GCCTTTAGATACGATCCGATCCT 59.556 47.826 2.69 0.00 0.00 3.24
458 514 3.056749 ACATCCGCCTTTAGATACGATCC 60.057 47.826 0.00 0.00 0.00 3.36
492 548 4.943705 CCTCTTGCTATACAACCACATGTT 59.056 41.667 0.00 0.00 37.80 2.71
493 549 4.517285 CCTCTTGCTATACAACCACATGT 58.483 43.478 0.00 0.00 37.32 3.21
494 550 3.879295 CCCTCTTGCTATACAACCACATG 59.121 47.826 0.00 0.00 33.68 3.21
495 551 3.117888 CCCCTCTTGCTATACAACCACAT 60.118 47.826 0.00 0.00 33.68 3.21
496 552 2.238646 CCCCTCTTGCTATACAACCACA 59.761 50.000 0.00 0.00 33.68 4.17
497 553 2.919228 CCCCTCTTGCTATACAACCAC 58.081 52.381 0.00 0.00 33.68 4.16
498 554 1.211949 GCCCCTCTTGCTATACAACCA 59.788 52.381 0.00 0.00 33.68 3.67
499 555 1.490910 AGCCCCTCTTGCTATACAACC 59.509 52.381 0.00 0.00 37.28 3.77
506 562 2.787339 TACCATAGCCCCTCTTGCTA 57.213 50.000 0.00 0.00 44.78 3.49
507 563 1.981495 GATACCATAGCCCCTCTTGCT 59.019 52.381 0.00 0.00 42.81 3.91
508 564 1.003696 GGATACCATAGCCCCTCTTGC 59.996 57.143 0.00 0.00 0.00 4.01
529 585 6.802361 CAGGATCTGAACCCTAATGGGCTG 62.802 54.167 0.00 0.00 45.16 4.85
530 586 4.780907 CAGGATCTGAACCCTAATGGGCT 61.781 52.174 0.00 0.00 45.16 5.19
531 587 2.487986 CAGGATCTGAACCCTAATGGGC 60.488 54.545 0.00 0.00 45.16 5.36
532 588 2.107204 CCAGGATCTGAACCCTAATGGG 59.893 54.545 0.00 0.00 46.04 4.00
533 589 2.780010 ACCAGGATCTGAACCCTAATGG 59.220 50.000 8.00 8.00 34.96 3.16
534 590 3.813443 CACCAGGATCTGAACCCTAATG 58.187 50.000 0.00 0.40 32.44 1.90
535 591 2.173569 GCACCAGGATCTGAACCCTAAT 59.826 50.000 0.00 0.00 32.44 1.73
536 592 1.559682 GCACCAGGATCTGAACCCTAA 59.440 52.381 0.00 0.00 32.44 2.69
537 593 1.204146 GCACCAGGATCTGAACCCTA 58.796 55.000 0.00 0.00 32.44 3.53
538 594 0.548682 AGCACCAGGATCTGAACCCT 60.549 55.000 0.00 0.00 32.44 4.34
539 595 0.107459 GAGCACCAGGATCTGAACCC 60.107 60.000 0.00 0.00 32.44 4.11
540 596 0.460987 CGAGCACCAGGATCTGAACC 60.461 60.000 0.00 0.00 32.44 3.62
541 597 1.086634 GCGAGCACCAGGATCTGAAC 61.087 60.000 0.00 0.00 32.44 3.18
542 598 1.219124 GCGAGCACCAGGATCTGAA 59.781 57.895 0.00 0.00 32.44 3.02
543 599 1.332889 ATGCGAGCACCAGGATCTGA 61.333 55.000 0.00 0.00 32.44 3.27
544 600 0.463295 AATGCGAGCACCAGGATCTG 60.463 55.000 0.00 0.00 0.00 2.90
545 601 0.254178 AAATGCGAGCACCAGGATCT 59.746 50.000 0.00 0.00 0.00 2.75
546 602 1.953559 TAAATGCGAGCACCAGGATC 58.046 50.000 0.00 0.00 0.00 3.36
547 603 2.645838 ATAAATGCGAGCACCAGGAT 57.354 45.000 0.00 0.00 0.00 3.24
548 604 2.418368 AATAAATGCGAGCACCAGGA 57.582 45.000 0.00 0.00 0.00 3.86
549 605 2.684881 AGAAATAAATGCGAGCACCAGG 59.315 45.455 0.00 0.00 0.00 4.45
550 606 3.488047 CCAGAAATAAATGCGAGCACCAG 60.488 47.826 0.00 0.00 0.00 4.00
551 607 2.423185 CCAGAAATAAATGCGAGCACCA 59.577 45.455 0.00 0.00 0.00 4.17
552 608 2.682856 TCCAGAAATAAATGCGAGCACC 59.317 45.455 0.00 0.00 0.00 5.01
553 609 4.558538 ATCCAGAAATAAATGCGAGCAC 57.441 40.909 0.00 0.00 0.00 4.40
554 610 5.581126 AAATCCAGAAATAAATGCGAGCA 57.419 34.783 0.00 0.00 0.00 4.26
555 611 8.579682 AAATAAATCCAGAAATAAATGCGAGC 57.420 30.769 0.00 0.00 0.00 5.03
556 612 9.956720 AGAAATAAATCCAGAAATAAATGCGAG 57.043 29.630 0.00 0.00 0.00 5.03
557 613 9.734620 CAGAAATAAATCCAGAAATAAATGCGA 57.265 29.630 0.00 0.00 0.00 5.10
558 614 8.971321 CCAGAAATAAATCCAGAAATAAATGCG 58.029 33.333 0.00 0.00 0.00 4.73
565 621 9.807649 CGAAAATCCAGAAATAAATCCAGAAAT 57.192 29.630 0.00 0.00 0.00 2.17
566 622 8.250332 CCGAAAATCCAGAAATAAATCCAGAAA 58.750 33.333 0.00 0.00 0.00 2.52
567 623 7.630513 GCCGAAAATCCAGAAATAAATCCAGAA 60.631 37.037 0.00 0.00 0.00 3.02
568 624 6.183360 GCCGAAAATCCAGAAATAAATCCAGA 60.183 38.462 0.00 0.00 0.00 3.86
569 625 5.979517 GCCGAAAATCCAGAAATAAATCCAG 59.020 40.000 0.00 0.00 0.00 3.86
570 626 5.449862 CGCCGAAAATCCAGAAATAAATCCA 60.450 40.000 0.00 0.00 0.00 3.41
571 627 4.976116 CGCCGAAAATCCAGAAATAAATCC 59.024 41.667 0.00 0.00 0.00 3.01
572 628 5.816919 TCGCCGAAAATCCAGAAATAAATC 58.183 37.500 0.00 0.00 0.00 2.17
573 629 5.828299 TCGCCGAAAATCCAGAAATAAAT 57.172 34.783 0.00 0.00 0.00 1.40
574 630 5.577835 CATCGCCGAAAATCCAGAAATAAA 58.422 37.500 0.00 0.00 0.00 1.40
575 631 4.497340 GCATCGCCGAAAATCCAGAAATAA 60.497 41.667 0.00 0.00 0.00 1.40
576 632 3.003275 GCATCGCCGAAAATCCAGAAATA 59.997 43.478 0.00 0.00 0.00 1.40
577 633 2.223572 GCATCGCCGAAAATCCAGAAAT 60.224 45.455 0.00 0.00 0.00 2.17
578 634 1.132262 GCATCGCCGAAAATCCAGAAA 59.868 47.619 0.00 0.00 0.00 2.52
579 635 0.732571 GCATCGCCGAAAATCCAGAA 59.267 50.000 0.00 0.00 0.00 3.02
580 636 1.428370 CGCATCGCCGAAAATCCAGA 61.428 55.000 0.00 0.00 0.00 3.86
581 637 1.010797 CGCATCGCCGAAAATCCAG 60.011 57.895 0.00 0.00 0.00 3.86
582 638 3.097672 CGCATCGCCGAAAATCCA 58.902 55.556 0.00 0.00 0.00 3.41
593 649 0.040692 CTCCCATTGAATGCGCATCG 60.041 55.000 25.53 9.81 0.00 3.84
594 650 0.313043 CCTCCCATTGAATGCGCATC 59.687 55.000 25.53 17.12 0.00 3.91
595 651 1.111116 CCCTCCCATTGAATGCGCAT 61.111 55.000 19.28 19.28 0.00 4.73
596 652 1.753848 CCCTCCCATTGAATGCGCA 60.754 57.895 14.96 14.96 0.00 6.09
597 653 2.492773 CCCCTCCCATTGAATGCGC 61.493 63.158 0.00 0.00 0.00 6.09
598 654 1.103398 GTCCCCTCCCATTGAATGCG 61.103 60.000 0.00 0.00 0.00 4.73
599 655 1.103398 CGTCCCCTCCCATTGAATGC 61.103 60.000 0.00 0.00 0.00 3.56
600 656 0.255890 ACGTCCCCTCCCATTGAATG 59.744 55.000 0.00 0.00 0.00 2.67
601 657 0.999712 AACGTCCCCTCCCATTGAAT 59.000 50.000 0.00 0.00 0.00 2.57
602 658 0.326927 GAACGTCCCCTCCCATTGAA 59.673 55.000 0.00 0.00 0.00 2.69
603 659 0.546747 AGAACGTCCCCTCCCATTGA 60.547 55.000 0.00 0.00 0.00 2.57
604 660 0.107654 GAGAACGTCCCCTCCCATTG 60.108 60.000 0.00 0.00 0.00 2.82
605 661 1.614241 CGAGAACGTCCCCTCCCATT 61.614 60.000 0.00 0.00 34.56 3.16
606 662 2.058595 CGAGAACGTCCCCTCCCAT 61.059 63.158 0.00 0.00 34.56 4.00
607 663 2.678934 CGAGAACGTCCCCTCCCA 60.679 66.667 0.00 0.00 34.56 4.37
632 688 2.467946 AAGTCACCGTACGCACCTCG 62.468 60.000 10.49 0.00 45.38 4.63
633 689 0.731855 GAAGTCACCGTACGCACCTC 60.732 60.000 10.49 1.65 0.00 3.85
634 690 1.288127 GAAGTCACCGTACGCACCT 59.712 57.895 10.49 0.00 0.00 4.00
635 691 0.389426 ATGAAGTCACCGTACGCACC 60.389 55.000 10.49 0.00 0.00 5.01
636 692 2.267188 TATGAAGTCACCGTACGCAC 57.733 50.000 10.49 5.94 0.00 5.34
637 693 3.300852 TTTATGAAGTCACCGTACGCA 57.699 42.857 10.49 0.29 0.00 5.24
638 694 4.852609 AATTTATGAAGTCACCGTACGC 57.147 40.909 10.49 0.00 0.00 4.42
639 695 6.397831 TGAAATTTATGAAGTCACCGTACG 57.602 37.500 8.69 8.69 0.00 3.67
640 696 7.955864 GTCTTGAAATTTATGAAGTCACCGTAC 59.044 37.037 0.00 0.00 0.00 3.67
641 697 7.148705 CGTCTTGAAATTTATGAAGTCACCGTA 60.149 37.037 0.00 0.00 0.00 4.02
642 698 6.347402 CGTCTTGAAATTTATGAAGTCACCGT 60.347 38.462 0.00 0.00 0.00 4.83
643 699 6.015504 CGTCTTGAAATTTATGAAGTCACCG 58.984 40.000 0.00 0.00 0.00 4.94
644 700 7.129109 TCGTCTTGAAATTTATGAAGTCACC 57.871 36.000 0.00 0.00 0.00 4.02
649 705 9.573102 CGACATATCGTCTTGAAATTTATGAAG 57.427 33.333 0.00 0.00 43.66 3.02
667 723 2.510768 AAAGACCGAGCCGACATATC 57.489 50.000 0.00 0.00 0.00 1.63
668 724 2.550978 CAAAAGACCGAGCCGACATAT 58.449 47.619 0.00 0.00 0.00 1.78
669 725 1.404986 CCAAAAGACCGAGCCGACATA 60.405 52.381 0.00 0.00 0.00 2.29
670 726 0.673644 CCAAAAGACCGAGCCGACAT 60.674 55.000 0.00 0.00 0.00 3.06
671 727 1.301401 CCAAAAGACCGAGCCGACA 60.301 57.895 0.00 0.00 0.00 4.35
672 728 1.005394 TCCAAAAGACCGAGCCGAC 60.005 57.895 0.00 0.00 0.00 4.79
673 729 1.183030 TCTCCAAAAGACCGAGCCGA 61.183 55.000 0.00 0.00 0.00 5.54
674 730 0.108138 ATCTCCAAAAGACCGAGCCG 60.108 55.000 0.00 0.00 36.65 5.52
675 731 1.373570 CATCTCCAAAAGACCGAGCC 58.626 55.000 0.00 0.00 36.65 4.70
676 732 0.729690 GCATCTCCAAAAGACCGAGC 59.270 55.000 0.00 0.00 36.65 5.03
677 733 2.275318 GAGCATCTCCAAAAGACCGAG 58.725 52.381 0.00 0.00 36.65 4.63
678 734 1.404181 CGAGCATCTCCAAAAGACCGA 60.404 52.381 0.00 0.00 36.65 4.69
679 735 1.002366 CGAGCATCTCCAAAAGACCG 58.998 55.000 0.00 0.00 36.65 4.79
680 736 2.100605 ACGAGCATCTCCAAAAGACC 57.899 50.000 0.00 0.00 36.65 3.85
681 737 3.190874 CCTACGAGCATCTCCAAAAGAC 58.809 50.000 0.00 0.00 36.65 3.01
682 738 2.168521 CCCTACGAGCATCTCCAAAAGA 59.831 50.000 0.00 0.00 38.72 2.52
683 739 2.168521 TCCCTACGAGCATCTCCAAAAG 59.831 50.000 0.00 0.00 0.00 2.27
684 740 2.184533 TCCCTACGAGCATCTCCAAAA 58.815 47.619 0.00 0.00 0.00 2.44
685 741 1.860641 TCCCTACGAGCATCTCCAAA 58.139 50.000 0.00 0.00 0.00 3.28
686 742 2.088104 ATCCCTACGAGCATCTCCAA 57.912 50.000 0.00 0.00 0.00 3.53
687 743 2.375509 TCTATCCCTACGAGCATCTCCA 59.624 50.000 0.00 0.00 0.00 3.86
688 744 3.074675 TCTATCCCTACGAGCATCTCC 57.925 52.381 0.00 0.00 0.00 3.71
689 745 4.461081 ACATTCTATCCCTACGAGCATCTC 59.539 45.833 0.00 0.00 0.00 2.75
690 746 4.411927 ACATTCTATCCCTACGAGCATCT 58.588 43.478 0.00 0.00 0.00 2.90
691 747 4.792521 ACATTCTATCCCTACGAGCATC 57.207 45.455 0.00 0.00 0.00 3.91
692 748 4.156190 CGTACATTCTATCCCTACGAGCAT 59.844 45.833 0.00 0.00 33.59 3.79
693 749 3.501062 CGTACATTCTATCCCTACGAGCA 59.499 47.826 0.00 0.00 33.59 4.26
694 750 3.501445 ACGTACATTCTATCCCTACGAGC 59.499 47.826 2.77 0.00 35.34 5.03
695 751 4.514441 ACACGTACATTCTATCCCTACGAG 59.486 45.833 2.77 0.00 35.34 4.18
696 752 4.274214 CACACGTACATTCTATCCCTACGA 59.726 45.833 2.77 0.00 35.34 3.43
697 753 4.036027 ACACACGTACATTCTATCCCTACG 59.964 45.833 0.00 0.00 36.97 3.51
698 754 5.279384 CACACACGTACATTCTATCCCTAC 58.721 45.833 0.00 0.00 0.00 3.18
699 755 4.202080 GCACACACGTACATTCTATCCCTA 60.202 45.833 0.00 0.00 0.00 3.53
700 756 3.430374 GCACACACGTACATTCTATCCCT 60.430 47.826 0.00 0.00 0.00 4.20
701 757 2.864343 GCACACACGTACATTCTATCCC 59.136 50.000 0.00 0.00 0.00 3.85
702 758 2.534349 CGCACACACGTACATTCTATCC 59.466 50.000 0.00 0.00 0.00 2.59
703 759 3.176708 ACGCACACACGTACATTCTATC 58.823 45.455 0.00 0.00 46.19 2.08
704 760 3.226346 ACGCACACACGTACATTCTAT 57.774 42.857 0.00 0.00 46.19 1.98
705 761 2.710220 ACGCACACACGTACATTCTA 57.290 45.000 0.00 0.00 46.19 2.10
706 762 3.580904 ACGCACACACGTACATTCT 57.419 47.368 0.00 0.00 46.19 2.40
714 770 1.298157 ATCCCATGAACGCACACACG 61.298 55.000 0.00 0.00 39.50 4.49
715 771 0.168788 CATCCCATGAACGCACACAC 59.831 55.000 0.00 0.00 0.00 3.82
716 772 0.036022 TCATCCCATGAACGCACACA 59.964 50.000 0.00 0.00 36.11 3.72
717 773 0.729116 CTCATCCCATGAACGCACAC 59.271 55.000 0.00 0.00 39.11 3.82
718 774 0.324614 ACTCATCCCATGAACGCACA 59.675 50.000 0.00 0.00 39.11 4.57
719 775 2.309528 TACTCATCCCATGAACGCAC 57.690 50.000 0.00 0.00 39.11 5.34
720 776 4.568956 CATATACTCATCCCATGAACGCA 58.431 43.478 0.00 0.00 39.11 5.24
721 777 3.372206 GCATATACTCATCCCATGAACGC 59.628 47.826 0.00 0.00 39.11 4.84
722 778 3.614176 CGCATATACTCATCCCATGAACG 59.386 47.826 0.00 0.00 39.11 3.95
723 779 3.372206 GCGCATATACTCATCCCATGAAC 59.628 47.826 0.30 0.00 39.11 3.18
724 780 3.599343 GCGCATATACTCATCCCATGAA 58.401 45.455 0.30 0.00 39.11 2.57
725 781 2.417243 CGCGCATATACTCATCCCATGA 60.417 50.000 8.75 0.00 37.76 3.07
726 782 1.929169 CGCGCATATACTCATCCCATG 59.071 52.381 8.75 0.00 0.00 3.66
727 783 1.550524 ACGCGCATATACTCATCCCAT 59.449 47.619 5.73 0.00 0.00 4.00
728 784 0.966179 ACGCGCATATACTCATCCCA 59.034 50.000 5.73 0.00 0.00 4.37
729 785 1.336887 ACACGCGCATATACTCATCCC 60.337 52.381 5.73 0.00 0.00 3.85
730 786 2.065993 ACACGCGCATATACTCATCC 57.934 50.000 5.73 0.00 0.00 3.51
731 787 6.199393 TCATATACACGCGCATATACTCATC 58.801 40.000 5.73 0.00 0.00 2.92
732 788 6.131544 TCATATACACGCGCATATACTCAT 57.868 37.500 5.73 0.00 0.00 2.90
733 789 5.554822 TCATATACACGCGCATATACTCA 57.445 39.130 5.73 0.00 0.00 3.41
734 790 4.438145 GCTCATATACACGCGCATATACTC 59.562 45.833 5.73 0.00 0.00 2.59
735 791 4.352039 GCTCATATACACGCGCATATACT 58.648 43.478 5.73 0.00 0.00 2.12
736 792 3.177838 CGCTCATATACACGCGCATATAC 59.822 47.826 5.73 0.29 39.11 1.47
737 793 3.359654 CGCTCATATACACGCGCATATA 58.640 45.455 5.73 9.29 39.11 0.86
738 794 2.185262 CGCTCATATACACGCGCATAT 58.815 47.619 5.73 7.02 39.11 1.78
739 795 1.613270 CGCTCATATACACGCGCATA 58.387 50.000 5.73 1.53 39.11 3.14
740 796 2.434688 CGCTCATATACACGCGCAT 58.565 52.632 5.73 0.00 39.11 4.73
741 797 3.916439 CGCTCATATACACGCGCA 58.084 55.556 5.73 0.00 39.11 6.09
744 800 1.653679 CGCAAACGCTCATATACACGC 60.654 52.381 0.00 0.00 0.00 5.34
745 801 1.586578 ACGCAAACGCTCATATACACG 59.413 47.619 0.00 0.00 45.53 4.49
746 802 2.858344 AGACGCAAACGCTCATATACAC 59.142 45.455 0.00 0.00 45.53 2.90
747 803 2.857748 CAGACGCAAACGCTCATATACA 59.142 45.455 0.00 0.00 45.53 2.29
748 804 2.858344 ACAGACGCAAACGCTCATATAC 59.142 45.455 0.00 0.00 45.53 1.47
749 805 2.857748 CACAGACGCAAACGCTCATATA 59.142 45.455 0.00 0.00 45.53 0.86
750 806 1.660607 CACAGACGCAAACGCTCATAT 59.339 47.619 0.00 0.00 45.53 1.78
751 807 1.067693 CACAGACGCAAACGCTCATA 58.932 50.000 0.00 0.00 45.53 2.15
752 808 0.880278 ACACAGACGCAAACGCTCAT 60.880 50.000 0.00 0.00 45.53 2.90
753 809 1.087202 AACACAGACGCAAACGCTCA 61.087 50.000 0.00 0.00 45.53 4.26
754 810 0.856641 TAACACAGACGCAAACGCTC 59.143 50.000 0.00 0.00 45.53 5.03
755 811 1.292061 TTAACACAGACGCAAACGCT 58.708 45.000 0.00 0.00 45.53 5.07
756 812 2.093972 TTTAACACAGACGCAAACGC 57.906 45.000 0.00 0.00 45.53 4.84
776 832 2.028203 CCCAATGAACATCCGCCTTTTT 60.028 45.455 0.00 0.00 0.00 1.94
777 833 1.550072 CCCAATGAACATCCGCCTTTT 59.450 47.619 0.00 0.00 0.00 2.27
778 834 1.185315 CCCAATGAACATCCGCCTTT 58.815 50.000 0.00 0.00 0.00 3.11
779 835 0.684153 CCCCAATGAACATCCGCCTT 60.684 55.000 0.00 0.00 0.00 4.35
780 836 1.076777 CCCCAATGAACATCCGCCT 60.077 57.895 0.00 0.00 0.00 5.52
781 837 2.785425 GCCCCAATGAACATCCGCC 61.785 63.158 0.00 0.00 0.00 6.13
782 838 1.754234 AGCCCCAATGAACATCCGC 60.754 57.895 0.00 0.00 0.00 5.54
783 839 0.680921 ACAGCCCCAATGAACATCCG 60.681 55.000 0.00 0.00 0.00 4.18
784 840 2.435372 TACAGCCCCAATGAACATCC 57.565 50.000 0.00 0.00 0.00 3.51
785 841 4.799564 TTTTACAGCCCCAATGAACATC 57.200 40.909 0.00 0.00 0.00 3.06
786 842 5.760484 AATTTTACAGCCCCAATGAACAT 57.240 34.783 0.00 0.00 0.00 2.71
787 843 6.865834 ATAATTTTACAGCCCCAATGAACA 57.134 33.333 0.00 0.00 0.00 3.18
788 844 8.007405 ACTATAATTTTACAGCCCCAATGAAC 57.993 34.615 0.00 0.00 0.00 3.18
789 845 7.836685 TGACTATAATTTTACAGCCCCAATGAA 59.163 33.333 0.00 0.00 0.00 2.57
790 846 7.284489 GTGACTATAATTTTACAGCCCCAATGA 59.716 37.037 0.00 0.00 0.00 2.57
791 847 7.285401 AGTGACTATAATTTTACAGCCCCAATG 59.715 37.037 0.00 0.00 0.00 2.82
867 923 1.461888 CGAGTTGGTTCGATTTCGTGC 60.462 52.381 0.00 0.00 43.03 5.34
923 979 4.047059 GCGAGTTCGGTGGACGGA 62.047 66.667 3.50 0.00 44.45 4.69
993 1056 2.123295 GGGGAATGCATGGGGGAC 60.123 66.667 0.00 0.00 0.00 4.46
1037 1100 2.692741 GGGAGTCCTTGGGGAGGG 60.693 72.222 9.58 0.00 46.31 4.30
1099 1162 1.270907 GAGGAGAGGAAGTGGAGCAA 58.729 55.000 0.00 0.00 0.00 3.91
1515 1578 2.099831 GTGACGAGCGGGTAGTCG 59.900 66.667 14.18 1.09 42.04 4.18
1531 1594 1.896122 GAAGAATCACCGTCGGGGGT 61.896 60.000 14.96 2.39 42.32 4.95
1548 1611 5.148502 AGAAAGAAGTAGGTGTGGAGAGAA 58.851 41.667 0.00 0.00 0.00 2.87
1566 1629 5.676584 GCTCTCCTGCATGATTCAAAGAAAG 60.677 44.000 0.00 0.00 0.00 2.62
1567 1630 4.157289 GCTCTCCTGCATGATTCAAAGAAA 59.843 41.667 0.00 0.00 0.00 2.52
1568 1631 3.693085 GCTCTCCTGCATGATTCAAAGAA 59.307 43.478 0.00 0.00 0.00 2.52
1569 1632 3.054582 AGCTCTCCTGCATGATTCAAAGA 60.055 43.478 0.00 0.00 34.99 2.52
1570 1633 3.280295 AGCTCTCCTGCATGATTCAAAG 58.720 45.455 0.00 0.00 34.99 2.77
1571 1634 3.276857 GAGCTCTCCTGCATGATTCAAA 58.723 45.455 6.43 0.00 34.99 2.69
1572 1635 2.421107 GGAGCTCTCCTGCATGATTCAA 60.421 50.000 14.64 0.00 46.16 2.69
1573 1636 1.140452 GGAGCTCTCCTGCATGATTCA 59.860 52.381 14.64 0.00 46.16 2.57
1574 1637 1.881591 GGAGCTCTCCTGCATGATTC 58.118 55.000 14.64 0.00 46.16 2.52
1590 1653 4.124851 AGAACATAAAGTAGGTGCGGAG 57.875 45.455 0.00 0.00 0.00 4.63
1591 1654 4.463539 TGTAGAACATAAAGTAGGTGCGGA 59.536 41.667 0.00 0.00 0.00 5.54
1592 1655 4.565564 GTGTAGAACATAAAGTAGGTGCGG 59.434 45.833 0.00 0.00 0.00 5.69
1593 1656 5.165676 TGTGTAGAACATAAAGTAGGTGCG 58.834 41.667 0.00 0.00 32.36 5.34
1594 1657 6.395629 TCTGTGTAGAACATAAAGTAGGTGC 58.604 40.000 0.00 0.00 38.39 5.01
1595 1658 8.470805 AGATCTGTGTAGAACATAAAGTAGGTG 58.529 37.037 0.00 0.00 38.39 4.00
1596 1659 8.596781 AGATCTGTGTAGAACATAAAGTAGGT 57.403 34.615 0.00 0.00 38.39 3.08
1600 1663 9.244292 TGTCTAGATCTGTGTAGAACATAAAGT 57.756 33.333 5.18 0.00 38.39 2.66
1610 1673 7.542890 ACAAGTGAATGTCTAGATCTGTGTAG 58.457 38.462 5.18 0.00 0.00 2.74
1624 1698 6.763355 AGATCTGTGTAGAACAAGTGAATGT 58.237 36.000 0.00 0.00 38.67 2.71
1629 1703 6.914259 TGTCTAGATCTGTGTAGAACAAGTG 58.086 40.000 5.18 0.00 38.67 3.16
1632 1706 9.856488 GTAAATGTCTAGATCTGTGTAGAACAA 57.144 33.333 5.18 0.00 38.67 2.83
1633 1707 9.244292 AGTAAATGTCTAGATCTGTGTAGAACA 57.756 33.333 5.18 2.35 36.32 3.18
1636 1710 9.244292 ACAAGTAAATGTCTAGATCTGTGTAGA 57.756 33.333 5.18 0.00 37.35 2.59
1637 1711 9.862371 AACAAGTAAATGTCTAGATCTGTGTAG 57.138 33.333 5.18 0.00 31.81 2.74
1651 1725 9.042008 CACAGTTCTGTACTAACAAGTAAATGT 57.958 33.333 5.11 5.19 34.32 2.71
1782 2865 7.793948 ATGCCTACTAGTACCCTAATTTAGG 57.206 40.000 14.57 14.57 45.81 2.69
1885 3165 6.547880 TGGTTGCCAGAGTTAAACAAGAATTA 59.452 34.615 0.00 0.00 0.00 1.40
1886 3166 5.362430 TGGTTGCCAGAGTTAAACAAGAATT 59.638 36.000 0.00 0.00 0.00 2.17
1887 3167 4.892934 TGGTTGCCAGAGTTAAACAAGAAT 59.107 37.500 0.00 0.00 0.00 2.40
1936 3216 3.522553 GACATAAGGTAGAGCAAGCGTT 58.477 45.455 0.00 0.00 0.00 4.84
1946 3226 2.349580 TCGACGACACGACATAAGGTAG 59.650 50.000 0.00 0.00 37.37 3.18
1954 3234 2.191815 TTTTTCTCGACGACACGACA 57.808 45.000 0.00 0.00 37.37 4.35
2087 3370 8.954350 AGTAGCATGATGGAAAGATATTTATGC 58.046 33.333 8.70 8.70 38.82 3.14
2149 3432 8.629158 CACCCGAATAATTTCCAAATCATTCTA 58.371 33.333 6.41 0.00 32.99 2.10
2311 3708 4.458397 CTGAACATGAGGCATGGACTTAT 58.542 43.478 11.61 0.00 45.16 1.73
2322 3719 2.486982 CTCAACAAGCCTGAACATGAGG 59.513 50.000 0.00 0.00 31.50 3.86
2345 3742 3.865011 TGCATGTGAAATACGGCAAAT 57.135 38.095 0.00 0.00 38.66 2.32
2991 4396 7.497595 TCCACCTGTATACTCAAATGTGTATC 58.502 38.462 10.45 5.35 36.49 2.24
3107 4637 7.030165 AGATAACTGTGACAAACTATGAGTCG 58.970 38.462 0.00 0.00 35.09 4.18
3138 4668 4.482030 TGGTTCAGGTGGTACAGTAGTAA 58.518 43.478 0.00 0.00 41.80 2.24
3150 4680 3.684908 TCATGTGGTATTGGTTCAGGTG 58.315 45.455 0.00 0.00 0.00 4.00
3245 4783 6.038603 TGTGCAAGTATGAATCAGATAAAGGC 59.961 38.462 0.00 0.00 0.00 4.35
3246 4784 7.412853 GTGTGCAAGTATGAATCAGATAAAGG 58.587 38.462 0.00 0.00 0.00 3.11
3247 4785 7.066163 TGGTGTGCAAGTATGAATCAGATAAAG 59.934 37.037 0.00 0.00 0.00 1.85
3248 4786 6.883756 TGGTGTGCAAGTATGAATCAGATAAA 59.116 34.615 0.00 0.00 0.00 1.40
3250 4788 5.988287 TGGTGTGCAAGTATGAATCAGATA 58.012 37.500 0.00 0.00 0.00 1.98
3251 4789 4.847198 TGGTGTGCAAGTATGAATCAGAT 58.153 39.130 0.00 0.00 0.00 2.90
3258 4796 3.415457 TGTGATGGTGTGCAAGTATGA 57.585 42.857 0.00 0.00 0.00 2.15
3263 4801 4.968812 TCATAATGTGATGGTGTGCAAG 57.031 40.909 0.00 0.00 0.00 4.01
3264 4802 6.827762 TCTTATCATAATGTGATGGTGTGCAA 59.172 34.615 2.62 0.00 46.85 4.08
3295 4833 9.219603 CCTAGAAACAACAGTTTAATCTGATGA 57.780 33.333 23.13 6.45 39.48 2.92
3296 4834 8.454106 CCCTAGAAACAACAGTTTAATCTGATG 58.546 37.037 18.30 17.89 41.68 3.07
3384 4933 5.653769 CCAGAGATTTAAAATGGAGCTTGGA 59.346 40.000 0.00 0.00 32.55 3.53
3523 5084 8.607441 TCTGCCAATTACTATGCACTTATTAG 57.393 34.615 0.00 0.00 0.00 1.73
3555 5116 2.091541 CCGCAGCCATTCTTTTCCTTA 58.908 47.619 0.00 0.00 0.00 2.69
3570 5131 1.728971 CTTTCTACAAGTGCTCCGCAG 59.271 52.381 0.00 0.00 40.08 5.18
3637 5198 4.123506 ACCCGCAAAAATTTAACACAAGG 58.876 39.130 0.00 0.00 0.00 3.61
3648 5209 6.810911 TGCATACAAATATACCCGCAAAAAT 58.189 32.000 0.00 0.00 0.00 1.82
3654 5459 5.432885 AAGTTGCATACAAATATACCCGC 57.567 39.130 0.00 0.00 37.58 6.13
3685 5490 8.233868 TGAATTTATTTCCATAGTGTTGACACG 58.766 33.333 8.48 0.00 41.43 4.49
3690 5495 8.066612 ACCCTGAATTTATTTCCATAGTGTTG 57.933 34.615 0.00 0.00 33.04 3.33
3722 5642 9.084533 AGTGTCCTTCTCCTTTACATATCTATC 57.915 37.037 0.00 0.00 0.00 2.08
3763 5683 3.509184 GGGTTAGGGTTAGCCTACGATAG 59.491 52.174 9.97 0.00 34.53 2.08
3764 5684 3.500343 GGGTTAGGGTTAGCCTACGATA 58.500 50.000 9.97 0.00 31.32 2.92
3765 5685 2.323599 GGGTTAGGGTTAGCCTACGAT 58.676 52.381 9.97 0.00 31.32 3.73
3766 5686 1.689258 GGGGTTAGGGTTAGCCTACGA 60.689 57.143 9.97 0.00 33.68 3.43
3767 5687 0.755079 GGGGTTAGGGTTAGCCTACG 59.245 60.000 9.97 0.00 33.68 3.51
3768 5688 1.883678 TGGGGTTAGGGTTAGCCTAC 58.116 55.000 9.97 5.72 33.68 3.18
3769 5689 2.901991 ATGGGGTTAGGGTTAGCCTA 57.098 50.000 6.03 6.03 33.68 3.93
3770 5690 1.850998 GAATGGGGTTAGGGTTAGCCT 59.149 52.381 8.42 8.42 33.68 4.58
3788 5708 4.036734 GTGACAGGAAAAGCAACATGAGAA 59.963 41.667 0.00 0.00 0.00 2.87
3797 5717 1.677576 CTTGCAGTGACAGGAAAAGCA 59.322 47.619 0.00 0.00 0.00 3.91
3810 5730 0.390860 ACGTTCAGAGCTCTTGCAGT 59.609 50.000 15.27 9.59 42.74 4.40
3814 5734 5.168569 TGGTATAAACGTTCAGAGCTCTTG 58.831 41.667 15.27 10.10 0.00 3.02
3825 5745 7.887996 TGTCGAGTAAAATGGTATAAACGTT 57.112 32.000 0.00 0.00 0.00 3.99
3874 5794 7.237982 TGGGAATCTCAAAAAGGAAGTGAATA 58.762 34.615 0.00 0.00 0.00 1.75
3875 5795 6.077322 TGGGAATCTCAAAAAGGAAGTGAAT 58.923 36.000 0.00 0.00 0.00 2.57
3891 5811 4.437682 TGAAGTGAACTGTTGGGAATCT 57.562 40.909 0.00 0.00 0.00 2.40
3894 5814 4.531854 TCAATGAAGTGAACTGTTGGGAA 58.468 39.130 0.00 0.00 0.00 3.97
3897 5817 5.922544 GGAATTCAATGAAGTGAACTGTTGG 59.077 40.000 7.93 0.00 40.22 3.77
3915 5835 7.593644 ACAACTAAAAATGCGTACAAGGAATTC 59.406 33.333 0.00 0.00 0.00 2.17
3942 5862 8.522542 TTTGGCTAGTTAGGTAAAAGAAAACA 57.477 30.769 0.00 0.00 0.00 2.83
4076 6001 7.708051 TCAAATTGGAACTAAAATCACGACAA 58.292 30.769 0.00 0.00 0.00 3.18
4077 6002 7.265647 TCAAATTGGAACTAAAATCACGACA 57.734 32.000 0.00 0.00 0.00 4.35
4078 6003 7.992801 GTTCAAATTGGAACTAAAATCACGAC 58.007 34.615 17.07 0.00 42.98 4.34
4090 6015 7.273815 TGTCGTTGTTTTAGTTCAAATTGGAAC 59.726 33.333 16.69 16.69 45.87 3.62
4091 6016 7.313646 TGTCGTTGTTTTAGTTCAAATTGGAA 58.686 30.769 0.00 0.00 0.00 3.53
4092 6017 6.853720 TGTCGTTGTTTTAGTTCAAATTGGA 58.146 32.000 0.00 0.00 0.00 3.53
4093 6018 7.274686 ACTTGTCGTTGTTTTAGTTCAAATTGG 59.725 33.333 0.00 0.00 0.00 3.16
4094 6019 8.168681 ACTTGTCGTTGTTTTAGTTCAAATTG 57.831 30.769 0.00 0.00 0.00 2.32
4095 6020 8.751302 AACTTGTCGTTGTTTTAGTTCAAATT 57.249 26.923 0.00 0.00 33.72 1.82
4096 6021 8.751302 AAACTTGTCGTTGTTTTAGTTCAAAT 57.249 26.923 0.00 0.00 35.61 2.32
4097 6022 8.576936 AAAACTTGTCGTTGTTTTAGTTCAAA 57.423 26.923 0.00 0.00 42.35 2.69
4098 6023 8.576936 AAAAACTTGTCGTTGTTTTAGTTCAA 57.423 26.923 0.00 0.00 43.04 2.69
4120 6045 5.828859 TGAAATACTCCCTCCGTTTCAAAAA 59.171 36.000 0.00 0.00 36.27 1.94
4121 6046 5.239963 GTGAAATACTCCCTCCGTTTCAAAA 59.760 40.000 0.00 0.00 39.59 2.44
4122 6047 4.758165 GTGAAATACTCCCTCCGTTTCAAA 59.242 41.667 0.00 0.00 39.59 2.69
4123 6048 4.041198 AGTGAAATACTCCCTCCGTTTCAA 59.959 41.667 0.00 0.00 39.59 2.69
4124 6049 3.581332 AGTGAAATACTCCCTCCGTTTCA 59.419 43.478 0.00 0.00 33.17 2.69
4125 6050 4.203654 AGTGAAATACTCCCTCCGTTTC 57.796 45.455 0.00 0.00 33.17 2.78
4126 6051 5.750352 TTAGTGAAATACTCCCTCCGTTT 57.250 39.130 0.00 0.00 40.89 3.60
4127 6052 5.661759 AGATTAGTGAAATACTCCCTCCGTT 59.338 40.000 0.00 0.00 40.89 4.44
4128 6053 5.069251 CAGATTAGTGAAATACTCCCTCCGT 59.931 44.000 0.00 0.00 40.89 4.69
4129 6054 5.533482 CAGATTAGTGAAATACTCCCTCCG 58.467 45.833 0.00 0.00 40.89 4.63
4130 6055 5.163301 TGCAGATTAGTGAAATACTCCCTCC 60.163 44.000 0.00 0.00 40.89 4.30
4131 6056 5.918608 TGCAGATTAGTGAAATACTCCCTC 58.081 41.667 0.00 0.00 40.89 4.30
4132 6057 5.957771 TGCAGATTAGTGAAATACTCCCT 57.042 39.130 0.00 0.00 40.89 4.20
4133 6058 6.058183 ACATGCAGATTAGTGAAATACTCCC 58.942 40.000 0.00 0.00 40.89 4.30
4134 6059 8.839310 ATACATGCAGATTAGTGAAATACTCC 57.161 34.615 0.00 0.00 40.89 3.85
4143 6068 9.310716 CCATCATAGTATACATGCAGATTAGTG 57.689 37.037 5.50 0.00 0.00 2.74
4155 6080 7.618019 AAAGGAGCTTCCATCATAGTATACA 57.382 36.000 5.50 0.00 39.61 2.29
4161 6086 8.512956 CAATATCAAAAGGAGCTTCCATCATAG 58.487 37.037 5.21 0.00 39.61 2.23
4162 6087 8.000709 ACAATATCAAAAGGAGCTTCCATCATA 58.999 33.333 5.21 0.00 39.61 2.15
4212 6138 7.819900 GGTTTATTTGCACCATTATAACCAACA 59.180 33.333 0.00 0.00 32.74 3.33
4247 6173 5.009010 ACCTGCAAAGAGACAACATTACAAG 59.991 40.000 0.00 0.00 0.00 3.16
4297 6223 5.916883 CCGACGATACAATACTCGGTAAATT 59.083 40.000 0.00 0.00 39.27 1.82
4381 6307 5.625656 CAGAGGACTGTCTGGAAATACTTCC 60.626 48.000 7.85 0.00 43.47 3.46
4484 6410 2.449967 TTAGGGTCAGCAGACGGGGA 62.450 60.000 2.90 0.00 45.92 4.81
4508 6434 0.882484 TCGCTGTCATGTTTTCCGCA 60.882 50.000 0.00 0.00 0.00 5.69
4523 6449 2.281345 AAAGCTGCACTGCTCGCT 60.281 55.556 11.20 11.20 43.24 4.93
4538 6464 1.187974 TGGCGAATCTAGTCCCGAAA 58.812 50.000 0.00 0.00 0.00 3.46
4544 6470 3.385577 GTCATCCTTGGCGAATCTAGTC 58.614 50.000 0.00 0.00 0.00 2.59
4657 6583 3.814316 GCTACCCAAAACAGAACAGGGAT 60.814 47.826 2.29 0.00 42.25 3.85
4672 6598 0.981183 AAGAACATCCGTGCTACCCA 59.019 50.000 0.00 0.00 27.33 4.51
4753 6679 4.749245 ACACACTGCCGAGAATAAAAAG 57.251 40.909 0.00 0.00 0.00 2.27
4765 6691 0.613260 TCAGTCCCATACACACTGCC 59.387 55.000 0.00 0.00 37.95 4.85
4902 6830 7.751047 TGCTCTTACGACAAGAATGTATAAC 57.249 36.000 0.00 0.00 40.74 1.89
4989 9863 7.495606 ACTTCTGAAATTTTGTTCCATTTCCAC 59.504 33.333 0.00 0.00 38.23 4.02
5003 9877 6.636850 GCGTGTAACAATGACTTCTGAAATTT 59.363 34.615 0.00 0.00 35.74 1.82
5103 9994 0.173708 AAGAAAAACCGCACGCCAAA 59.826 45.000 0.00 0.00 0.00 3.28
5105 9996 0.173708 AAAAGAAAAACCGCACGCCA 59.826 45.000 0.00 0.00 0.00 5.69
5110 10001 5.312120 TGTAGTCAAAAAGAAAAACCGCA 57.688 34.783 0.00 0.00 0.00 5.69
5145 10036 7.280876 ACACAGCTCAATATCATTATTTGACGT 59.719 33.333 0.00 0.00 37.11 4.34
5146 10037 7.585210 CACACAGCTCAATATCATTATTTGACG 59.415 37.037 0.00 0.00 37.11 4.35
5219 10111 4.507710 TGCACCTCATGAATCTACAGTTC 58.492 43.478 0.00 0.00 0.00 3.01
5317 10292 6.325596 CGCATCTAGCTATAGCAGTGAATTA 58.674 40.000 26.07 7.39 45.16 1.40
5366 10342 5.709631 TGCTTATTTGTTACTGCCTCATCAA 59.290 36.000 0.00 0.00 0.00 2.57
5412 10785 4.383770 GGAGGTTTACAACTAGCTATGGCA 60.384 45.833 3.10 0.00 41.70 4.92
5467 10840 5.914033 TGTCAACAAGGCATAGGAGTATAC 58.086 41.667 0.00 0.00 0.00 1.47
5719 11092 2.289444 CGGAGTCCTACATGGTTGTTGT 60.289 50.000 7.77 0.00 37.28 3.32
5720 11093 2.028476 TCGGAGTCCTACATGGTTGTTG 60.028 50.000 7.77 0.00 37.28 3.33
5721 11094 2.028385 GTCGGAGTCCTACATGGTTGTT 60.028 50.000 8.92 0.00 37.28 2.83
5722 11095 1.549170 GTCGGAGTCCTACATGGTTGT 59.451 52.381 8.92 0.00 39.98 3.32
5745 11118 1.067295 AGGATTTGAGTGGCACAGGA 58.933 50.000 21.41 2.86 41.80 3.86
5750 11123 1.559682 GGGAGTAGGATTTGAGTGGCA 59.440 52.381 0.00 0.00 0.00 4.92
5762 11135 2.772622 AATGGGGCCGGGAGTAGG 60.773 66.667 2.18 0.00 0.00 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.