Multiple sequence alignment - TraesCS4A01G405400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G405400 chr4A 100.000 2585 0 0 1 2585 678406025 678403441 0.000000e+00 4774.0
1 TraesCS4A01G405400 chr4A 86.149 1018 75 26 675 1665 678376994 678376016 0.000000e+00 1038.0
2 TraesCS4A01G405400 chr4A 81.398 801 95 33 892 1665 678373965 678373192 2.850000e-169 604.0
3 TraesCS4A01G405400 chr4A 83.009 565 64 16 1092 1642 678370189 678369643 1.390000e-132 483.0
4 TraesCS4A01G405400 chr4A 88.684 380 31 4 1101 1480 678340946 678340579 1.090000e-123 453.0
5 TraesCS4A01G405400 chr4A 100.000 191 0 0 2394 2584 32333774 32333964 1.140000e-93 353.0
6 TraesCS4A01G405400 chr4B 89.908 1090 76 21 666 1740 593343154 593342084 0.000000e+00 1373.0
7 TraesCS4A01G405400 chr4B 89.813 854 60 13 818 1665 593200603 593199771 0.000000e+00 1070.0
8 TraesCS4A01G405400 chr4B 88.544 419 34 6 1107 1511 593197694 593197276 1.790000e-136 496.0
9 TraesCS4A01G405400 chr4B 81.795 390 60 3 2008 2394 593341646 593341265 1.490000e-82 316.0
10 TraesCS4A01G405400 chr4B 86.190 210 17 8 1789 1996 593341938 593341739 1.560000e-52 217.0
11 TraesCS4A01G405400 chr4D 88.551 1118 70 26 664 1744 471262015 471260919 0.000000e+00 1303.0
12 TraesCS4A01G405400 chr4D 86.059 954 52 28 795 1712 471229588 471228680 0.000000e+00 950.0
13 TraesCS4A01G405400 chr4D 89.305 561 54 4 1107 1665 471216799 471216243 0.000000e+00 699.0
14 TraesCS4A01G405400 chr4D 82.158 695 73 24 1092 1744 471212683 471211998 1.350000e-152 549.0
15 TraesCS4A01G405400 chr4D 81.683 606 58 27 892 1474 470857023 470856448 3.030000e-124 455.0
16 TraesCS4A01G405400 chr4D 87.760 384 35 3 1107 1490 471153967 471153596 3.050000e-119 438.0
17 TraesCS4A01G405400 chr4D 93.600 250 11 4 306 551 459811883 459812131 4.060000e-98 368.0
18 TraesCS4A01G405400 chr4D 84.615 208 19 8 1789 1994 471260772 471260576 7.300000e-46 195.0
19 TraesCS4A01G405400 chr4D 84.722 72 2 2 1556 1618 471153468 471153397 2.150000e-06 63.9
20 TraesCS4A01G405400 chr4D 100.000 31 0 0 669 699 471229651 471229621 9.990000e-05 58.4
21 TraesCS4A01G405400 chr7A 94.286 245 11 3 310 551 127261580 127261824 3.140000e-99 372.0
22 TraesCS4A01G405400 chr7A 99.479 192 1 0 2394 2585 55080033 55080224 1.470000e-92 350.0
23 TraesCS4A01G405400 chr7A 99.479 192 1 0 2394 2585 511720919 511720728 1.470000e-92 350.0
24 TraesCS4A01G405400 chr6D 94.286 245 10 4 310 551 26354239 26353996 3.140000e-99 372.0
25 TraesCS4A01G405400 chr6D 93.927 247 10 4 309 551 926311 926066 4.060000e-98 368.0
26 TraesCS4A01G405400 chr6D 93.878 245 11 4 310 551 388990622 388990865 1.460000e-97 366.0
27 TraesCS4A01G405400 chr6D 92.885 253 13 4 303 551 106456910 106457161 1.890000e-96 363.0
28 TraesCS4A01G405400 chr3D 93.600 250 12 4 303 551 107043534 107043780 1.130000e-98 370.0
29 TraesCS4A01G405400 chr7D 93.200 250 12 4 306 551 126245056 126244808 1.890000e-96 363.0
30 TraesCS4A01G405400 chr7D 92.218 257 15 5 298 551 439780506 439780760 2.450000e-95 359.0
31 TraesCS4A01G405400 chr7D 81.169 308 54 1 2002 2305 446246834 446246527 7.150000e-61 244.0
32 TraesCS4A01G405400 chr6A 99.476 191 1 0 2395 2585 84078764 84078574 5.290000e-92 348.0
33 TraesCS4A01G405400 chr6A 99.476 191 1 0 2395 2585 84085773 84085583 5.290000e-92 348.0
34 TraesCS4A01G405400 chr6A 82.883 222 33 4 1 218 600136975 600136755 7.300000e-46 195.0
35 TraesCS4A01G405400 chr5A 98.974 195 1 1 2391 2585 323394802 323394995 5.290000e-92 348.0
36 TraesCS4A01G405400 chr5A 98.462 195 3 0 2391 2585 383557184 383556990 6.850000e-91 344.0
37 TraesCS4A01G405400 chr5A 83.333 222 35 2 1 220 52178652 52178873 1.210000e-48 204.0
38 TraesCS4A01G405400 chr5A 80.000 230 32 10 1 218 311677554 311677781 9.580000e-35 158.0
39 TraesCS4A01G405400 chrUn 98.958 192 2 0 2394 2585 328048925 328048734 6.850000e-91 344.0
40 TraesCS4A01G405400 chr2A 97.980 198 3 1 2389 2585 724395881 724395684 2.460000e-90 342.0
41 TraesCS4A01G405400 chr7B 82.085 307 55 0 1999 2305 113164304 113164610 1.970000e-66 263.0
42 TraesCS4A01G405400 chr1D 86.147 231 22 6 1 221 410536167 410536397 9.240000e-60 241.0
43 TraesCS4A01G405400 chr5D 84.444 225 24 7 1 214 282249792 282249568 7.250000e-51 211.0
44 TraesCS4A01G405400 chr2D 83.913 230 27 4 1 220 331376471 331376700 7.250000e-51 211.0
45 TraesCS4A01G405400 chr1A 82.895 228 32 3 1 221 23411686 23411459 5.640000e-47 198.0
46 TraesCS4A01G405400 chr1A 82.778 180 22 6 50 220 297126366 297126545 4.460000e-33 152.0
47 TraesCS4A01G405400 chr3A 81.333 225 32 5 1 215 358900560 358900784 9.510000e-40 174.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G405400 chr4A 678403441 678406025 2584 True 4774.000000 4774 100.000000 1 2585 1 chr4A.!!$R2 2584
1 TraesCS4A01G405400 chr4A 678369643 678376994 7351 True 708.333333 1038 83.518667 675 1665 3 chr4A.!!$R3 990
2 TraesCS4A01G405400 chr4B 593197276 593200603 3327 True 783.000000 1070 89.178500 818 1665 2 chr4B.!!$R1 847
3 TraesCS4A01G405400 chr4B 593341265 593343154 1889 True 635.333333 1373 85.964333 666 2394 3 chr4B.!!$R2 1728
4 TraesCS4A01G405400 chr4D 471260576 471262015 1439 True 749.000000 1303 86.583000 664 1994 2 chr4D.!!$R5 1330
5 TraesCS4A01G405400 chr4D 471211998 471216799 4801 True 624.000000 699 85.731500 1092 1744 2 chr4D.!!$R3 652
6 TraesCS4A01G405400 chr4D 471228680 471229651 971 True 504.200000 950 93.029500 669 1712 2 chr4D.!!$R4 1043
7 TraesCS4A01G405400 chr4D 470856448 470857023 575 True 455.000000 455 81.683000 892 1474 1 chr4D.!!$R1 582
8 TraesCS4A01G405400 chr4D 471153397 471153967 570 True 250.950000 438 86.241000 1107 1618 2 chr4D.!!$R2 511

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
252 253 0.029834 CTGCACTTGTGACTTGCCAC 59.97 55.0 4.79 0.0 35.26 5.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2245 2572 0.033796 ACGTCCTATCCTTGTCCCGA 60.034 55.0 0.0 0.0 0.0 5.14 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 7.849804 AGACAATTTCGCTTATGTGATAAGT 57.150 32.000 0.00 0.00 43.22 2.24
26 27 8.942338 AGACAATTTCGCTTATGTGATAAGTA 57.058 30.769 0.00 0.00 43.22 2.24
27 28 9.547753 AGACAATTTCGCTTATGTGATAAGTAT 57.452 29.630 0.00 0.00 43.22 2.12
47 48 8.788325 AAGTATTTAATAAGGAAAGACGTGCT 57.212 30.769 0.00 0.00 34.09 4.40
48 49 8.788325 AGTATTTAATAAGGAAAGACGTGCTT 57.212 30.769 0.00 0.00 38.88 3.91
49 50 8.665685 AGTATTTAATAAGGAAAGACGTGCTTG 58.334 33.333 0.00 0.00 36.80 4.01
50 51 6.870971 TTTAATAAGGAAAGACGTGCTTGT 57.129 33.333 0.00 0.00 36.80 3.16
51 52 4.749245 AATAAGGAAAGACGTGCTTGTG 57.251 40.909 0.00 0.00 36.80 3.33
52 53 1.308998 AAGGAAAGACGTGCTTGTGG 58.691 50.000 0.00 0.00 36.80 4.17
53 54 0.180406 AGGAAAGACGTGCTTGTGGT 59.820 50.000 0.00 0.00 36.80 4.16
54 55 1.414919 AGGAAAGACGTGCTTGTGGTA 59.585 47.619 0.00 0.00 36.80 3.25
55 56 2.158871 AGGAAAGACGTGCTTGTGGTAA 60.159 45.455 0.00 0.00 36.80 2.85
56 57 2.032290 GGAAAGACGTGCTTGTGGTAAC 60.032 50.000 0.00 0.00 36.80 2.50
57 58 2.319136 AAGACGTGCTTGTGGTAACA 57.681 45.000 0.00 0.00 39.24 2.41
58 59 3.211045 AAAGACGTGCTTGTGGTAACAT 58.789 40.909 0.00 0.00 42.99 2.71
59 60 4.382291 AAAGACGTGCTTGTGGTAACATA 58.618 39.130 0.00 0.00 42.99 2.29
60 61 4.817464 AAAGACGTGCTTGTGGTAACATAA 59.183 37.500 0.00 0.00 46.24 1.90
81 82 8.702438 ACATAATATATTACCGTAACACAACGC 58.298 33.333 7.34 0.00 41.51 4.84
82 83 8.918658 CATAATATATTACCGTAACACAACGCT 58.081 33.333 7.34 0.00 41.51 5.07
83 84 7.775397 AATATATTACCGTAACACAACGCTT 57.225 32.000 0.00 0.00 41.51 4.68
84 85 5.707411 ATATTACCGTAACACAACGCTTC 57.293 39.130 0.00 0.00 41.51 3.86
85 86 1.782044 TACCGTAACACAACGCTTCC 58.218 50.000 0.00 0.00 41.51 3.46
86 87 0.881600 ACCGTAACACAACGCTTCCC 60.882 55.000 0.00 0.00 41.51 3.97
87 88 1.489824 CGTAACACAACGCTTCCCG 59.510 57.895 0.00 0.00 44.21 5.14
88 89 0.940519 CGTAACACAACGCTTCCCGA 60.941 55.000 0.00 0.00 41.02 5.14
89 90 1.435577 GTAACACAACGCTTCCCGAT 58.564 50.000 0.00 0.00 41.02 4.18
90 91 1.127951 GTAACACAACGCTTCCCGATG 59.872 52.381 0.00 0.00 44.24 3.84
91 92 1.852067 AACACAACGCTTCCCGATGC 61.852 55.000 0.00 0.00 42.69 3.91
92 93 2.031919 ACAACGCTTCCCGATGCA 59.968 55.556 0.00 0.00 42.69 3.96
93 94 1.599518 ACAACGCTTCCCGATGCAA 60.600 52.632 0.00 0.00 42.69 4.08
94 95 1.169661 ACAACGCTTCCCGATGCAAA 61.170 50.000 0.00 0.00 42.69 3.68
95 96 0.039617 CAACGCTTCCCGATGCAAAA 60.040 50.000 0.00 0.00 41.02 2.44
96 97 0.887933 AACGCTTCCCGATGCAAAAT 59.112 45.000 0.00 0.00 41.02 1.82
97 98 0.171007 ACGCTTCCCGATGCAAAATG 59.829 50.000 0.00 0.00 41.02 2.32
98 99 0.451383 CGCTTCCCGATGCAAAATGA 59.549 50.000 0.00 0.00 40.02 2.57
99 100 1.532505 CGCTTCCCGATGCAAAATGAG 60.533 52.381 0.00 0.00 40.02 2.90
100 101 1.474077 GCTTCCCGATGCAAAATGAGT 59.526 47.619 0.00 0.00 0.00 3.41
101 102 2.094545 GCTTCCCGATGCAAAATGAGTT 60.095 45.455 0.00 0.00 0.00 3.01
102 103 3.614870 GCTTCCCGATGCAAAATGAGTTT 60.615 43.478 0.00 0.00 0.00 2.66
103 104 4.380444 GCTTCCCGATGCAAAATGAGTTTA 60.380 41.667 0.00 0.00 0.00 2.01
104 105 5.679638 GCTTCCCGATGCAAAATGAGTTTAT 60.680 40.000 0.00 0.00 0.00 1.40
105 106 5.247507 TCCCGATGCAAAATGAGTTTATG 57.752 39.130 0.00 0.00 0.00 1.90
106 107 4.946772 TCCCGATGCAAAATGAGTTTATGA 59.053 37.500 0.00 0.00 0.00 2.15
107 108 5.066375 TCCCGATGCAAAATGAGTTTATGAG 59.934 40.000 0.00 0.00 0.00 2.90
108 109 4.736793 CCGATGCAAAATGAGTTTATGAGC 59.263 41.667 0.00 0.00 0.00 4.26
109 110 5.449588 CCGATGCAAAATGAGTTTATGAGCT 60.450 40.000 0.00 0.00 0.00 4.09
110 111 6.238456 CCGATGCAAAATGAGTTTATGAGCTA 60.238 38.462 0.00 0.00 0.00 3.32
111 112 7.188834 CGATGCAAAATGAGTTTATGAGCTAA 58.811 34.615 0.00 0.00 0.00 3.09
112 113 7.859377 CGATGCAAAATGAGTTTATGAGCTAAT 59.141 33.333 0.00 0.00 0.00 1.73
122 123 9.394767 TGAGTTTATGAGCTAATAAATCAAGCA 57.605 29.630 17.59 9.82 38.75 3.91
129 130 9.790344 ATGAGCTAATAAATCAAGCAATCTACT 57.210 29.630 0.00 0.00 38.75 2.57
130 131 9.265901 TGAGCTAATAAATCAAGCAATCTACTC 57.734 33.333 0.00 0.00 38.75 2.59
131 132 9.487790 GAGCTAATAAATCAAGCAATCTACTCT 57.512 33.333 0.00 0.00 38.75 3.24
145 146 9.804758 AGCAATCTACTCTATGTTACTTTACAC 57.195 33.333 0.00 0.00 0.00 2.90
146 147 9.804758 GCAATCTACTCTATGTTACTTTACACT 57.195 33.333 0.00 0.00 0.00 3.55
201 202 9.712305 ATGCATGACACTAGTATAAATTACTCC 57.288 33.333 0.00 0.00 0.00 3.85
202 203 8.148351 TGCATGACACTAGTATAAATTACTCCC 58.852 37.037 0.00 0.00 0.00 4.30
203 204 7.603024 GCATGACACTAGTATAAATTACTCCCC 59.397 40.741 0.00 0.00 0.00 4.81
204 205 8.647796 CATGACACTAGTATAAATTACTCCCCA 58.352 37.037 0.00 0.00 0.00 4.96
205 206 8.015185 TGACACTAGTATAAATTACTCCCCAC 57.985 38.462 0.00 0.00 0.00 4.61
206 207 7.842743 TGACACTAGTATAAATTACTCCCCACT 59.157 37.037 0.00 0.00 0.00 4.00
207 208 9.359653 GACACTAGTATAAATTACTCCCCACTA 57.640 37.037 0.00 0.00 0.00 2.74
208 209 9.893975 ACACTAGTATAAATTACTCCCCACTAT 57.106 33.333 0.00 0.00 0.00 2.12
212 213 8.203681 AGTATAAATTACTCCCCACTATGACC 57.796 38.462 0.00 0.00 0.00 4.02
213 214 7.792736 AGTATAAATTACTCCCCACTATGACCA 59.207 37.037 0.00 0.00 0.00 4.02
214 215 5.373812 AAATTACTCCCCACTATGACCAG 57.626 43.478 0.00 0.00 0.00 4.00
215 216 1.789523 TACTCCCCACTATGACCAGC 58.210 55.000 0.00 0.00 0.00 4.85
216 217 0.983378 ACTCCCCACTATGACCAGCC 60.983 60.000 0.00 0.00 0.00 4.85
217 218 0.692419 CTCCCCACTATGACCAGCCT 60.692 60.000 0.00 0.00 0.00 4.58
218 219 0.253160 TCCCCACTATGACCAGCCTT 60.253 55.000 0.00 0.00 0.00 4.35
219 220 1.009060 TCCCCACTATGACCAGCCTTA 59.991 52.381 0.00 0.00 0.00 2.69
220 221 2.057922 CCCCACTATGACCAGCCTTAT 58.942 52.381 0.00 0.00 0.00 1.73
221 222 2.039084 CCCCACTATGACCAGCCTTATC 59.961 54.545 0.00 0.00 0.00 1.75
222 223 2.705658 CCCACTATGACCAGCCTTATCA 59.294 50.000 0.00 0.00 0.00 2.15
223 224 3.136443 CCCACTATGACCAGCCTTATCAA 59.864 47.826 0.00 0.00 0.00 2.57
224 225 4.384056 CCACTATGACCAGCCTTATCAAG 58.616 47.826 0.00 0.00 0.00 3.02
225 226 4.141620 CCACTATGACCAGCCTTATCAAGT 60.142 45.833 0.00 0.00 0.00 3.16
226 227 5.053145 CACTATGACCAGCCTTATCAAGTC 58.947 45.833 0.00 0.00 0.00 3.01
227 228 4.716784 ACTATGACCAGCCTTATCAAGTCA 59.283 41.667 0.00 0.00 38.49 3.41
228 229 3.616956 TGACCAGCCTTATCAAGTCAG 57.383 47.619 0.00 0.00 31.10 3.51
229 230 3.173151 TGACCAGCCTTATCAAGTCAGA 58.827 45.455 0.00 0.00 31.10 3.27
230 231 3.582647 TGACCAGCCTTATCAAGTCAGAA 59.417 43.478 0.00 0.00 31.10 3.02
231 232 4.225942 TGACCAGCCTTATCAAGTCAGAAT 59.774 41.667 0.00 0.00 31.10 2.40
232 233 5.184892 ACCAGCCTTATCAAGTCAGAATT 57.815 39.130 0.00 0.00 0.00 2.17
233 234 5.189180 ACCAGCCTTATCAAGTCAGAATTC 58.811 41.667 0.00 0.00 0.00 2.17
234 235 5.045286 ACCAGCCTTATCAAGTCAGAATTCT 60.045 40.000 0.88 0.88 0.00 2.40
235 236 5.296283 CCAGCCTTATCAAGTCAGAATTCTG 59.704 44.000 26.56 26.56 45.08 3.02
236 237 4.880696 AGCCTTATCAAGTCAGAATTCTGC 59.119 41.667 27.45 21.71 43.46 4.26
237 238 4.637534 GCCTTATCAAGTCAGAATTCTGCA 59.362 41.667 27.45 15.20 43.46 4.41
238 239 5.448360 GCCTTATCAAGTCAGAATTCTGCAC 60.448 44.000 27.45 23.69 43.46 4.57
239 240 5.879223 CCTTATCAAGTCAGAATTCTGCACT 59.121 40.000 27.45 25.15 43.46 4.40
240 241 6.373774 CCTTATCAAGTCAGAATTCTGCACTT 59.626 38.462 28.66 28.66 43.46 3.16
242 243 4.454678 TCAAGTCAGAATTCTGCACTTGT 58.545 39.130 38.63 25.36 46.83 3.16
243 244 4.274214 TCAAGTCAGAATTCTGCACTTGTG 59.726 41.667 38.63 30.13 46.83 3.33
244 245 4.077300 AGTCAGAATTCTGCACTTGTGA 57.923 40.909 27.45 7.99 43.46 3.58
245 246 3.812053 AGTCAGAATTCTGCACTTGTGAC 59.188 43.478 27.45 18.25 42.71 3.67
246 247 3.812053 GTCAGAATTCTGCACTTGTGACT 59.188 43.478 27.45 0.00 40.54 3.41
247 248 4.274459 GTCAGAATTCTGCACTTGTGACTT 59.726 41.667 27.45 0.28 40.54 3.01
248 249 4.274214 TCAGAATTCTGCACTTGTGACTTG 59.726 41.667 27.45 3.19 43.46 3.16
249 250 3.004106 AGAATTCTGCACTTGTGACTTGC 59.996 43.478 7.30 0.00 36.76 4.01
250 251 1.024271 TTCTGCACTTGTGACTTGCC 58.976 50.000 4.79 0.00 35.26 4.52
251 252 0.107263 TCTGCACTTGTGACTTGCCA 60.107 50.000 4.79 0.00 35.26 4.92
252 253 0.029834 CTGCACTTGTGACTTGCCAC 59.970 55.000 4.79 0.00 35.26 5.01
253 254 0.394216 TGCACTTGTGACTTGCCACT 60.394 50.000 4.79 0.00 37.89 4.00
254 255 1.134250 TGCACTTGTGACTTGCCACTA 60.134 47.619 4.79 0.00 37.89 2.74
255 256 2.154462 GCACTTGTGACTTGCCACTAT 58.846 47.619 4.79 0.00 37.89 2.12
256 257 2.554032 GCACTTGTGACTTGCCACTATT 59.446 45.455 4.79 0.00 37.89 1.73
257 258 3.751175 GCACTTGTGACTTGCCACTATTA 59.249 43.478 4.79 0.00 37.89 0.98
258 259 4.215399 GCACTTGTGACTTGCCACTATTAA 59.785 41.667 4.79 0.00 37.89 1.40
259 260 5.278266 GCACTTGTGACTTGCCACTATTAAA 60.278 40.000 4.79 0.00 37.89 1.52
260 261 6.734137 CACTTGTGACTTGCCACTATTAAAA 58.266 36.000 0.00 0.00 37.89 1.52
261 262 6.636850 CACTTGTGACTTGCCACTATTAAAAC 59.363 38.462 0.00 0.00 37.89 2.43
262 263 6.320164 ACTTGTGACTTGCCACTATTAAAACA 59.680 34.615 0.00 0.00 37.89 2.83
263 264 6.067263 TGTGACTTGCCACTATTAAAACAC 57.933 37.500 0.00 0.00 37.89 3.32
264 265 5.590663 TGTGACTTGCCACTATTAAAACACA 59.409 36.000 0.00 0.00 37.89 3.72
265 266 5.912955 GTGACTTGCCACTATTAAAACACAC 59.087 40.000 0.00 0.00 34.38 3.82
266 267 5.103290 ACTTGCCACTATTAAAACACACG 57.897 39.130 0.00 0.00 0.00 4.49
267 268 3.546002 TGCCACTATTAAAACACACGC 57.454 42.857 0.00 0.00 0.00 5.34
268 269 2.879026 TGCCACTATTAAAACACACGCA 59.121 40.909 0.00 0.00 0.00 5.24
269 270 3.315470 TGCCACTATTAAAACACACGCAA 59.685 39.130 0.00 0.00 0.00 4.85
270 271 4.022762 TGCCACTATTAAAACACACGCAAT 60.023 37.500 0.00 0.00 0.00 3.56
271 272 4.323336 GCCACTATTAAAACACACGCAATG 59.677 41.667 0.00 0.00 0.00 2.82
272 273 4.323336 CCACTATTAAAACACACGCAATGC 59.677 41.667 0.00 0.00 0.00 3.56
273 274 4.914504 CACTATTAAAACACACGCAATGCA 59.085 37.500 5.91 0.00 0.00 3.96
274 275 5.059587 CACTATTAAAACACACGCAATGCAG 59.940 40.000 5.91 0.00 0.00 4.41
275 276 1.764851 TAAAACACACGCAATGCAGC 58.235 45.000 5.91 0.00 0.00 5.25
276 277 0.179116 AAAACACACGCAATGCAGCA 60.179 45.000 5.91 0.00 0.00 4.41
277 278 0.595567 AAACACACGCAATGCAGCAG 60.596 50.000 5.91 0.00 0.00 4.24
278 279 2.803670 CACACGCAATGCAGCAGC 60.804 61.111 5.91 0.00 42.57 5.25
279 280 2.981909 ACACGCAATGCAGCAGCT 60.982 55.556 5.91 0.00 42.74 4.24
280 281 1.672030 ACACGCAATGCAGCAGCTA 60.672 52.632 5.91 0.00 42.74 3.32
281 282 1.236616 ACACGCAATGCAGCAGCTAA 61.237 50.000 5.91 0.00 42.74 3.09
282 283 0.795735 CACGCAATGCAGCAGCTAAC 60.796 55.000 5.91 0.00 42.74 2.34
283 284 1.226491 CGCAATGCAGCAGCTAACC 60.226 57.895 5.91 0.00 42.74 2.85
284 285 1.140375 GCAATGCAGCAGCTAACCC 59.860 57.895 0.00 0.00 42.74 4.11
285 286 1.430632 CAATGCAGCAGCTAACCCG 59.569 57.895 0.00 0.00 42.74 5.28
286 287 1.026182 CAATGCAGCAGCTAACCCGA 61.026 55.000 0.00 0.00 42.74 5.14
287 288 0.322456 AATGCAGCAGCTAACCCGAA 60.322 50.000 0.00 0.00 42.74 4.30
288 289 0.745845 ATGCAGCAGCTAACCCGAAG 60.746 55.000 0.00 0.00 42.74 3.79
289 290 1.376037 GCAGCAGCTAACCCGAAGT 60.376 57.895 0.00 0.00 37.91 3.01
290 291 1.362406 GCAGCAGCTAACCCGAAGTC 61.362 60.000 0.00 0.00 37.91 3.01
291 292 0.247736 CAGCAGCTAACCCGAAGTCT 59.752 55.000 0.00 0.00 0.00 3.24
292 293 0.533032 AGCAGCTAACCCGAAGTCTC 59.467 55.000 0.00 0.00 0.00 3.36
293 294 0.460459 GCAGCTAACCCGAAGTCTCC 60.460 60.000 0.00 0.00 0.00 3.71
294 295 0.179134 CAGCTAACCCGAAGTCTCCG 60.179 60.000 0.00 0.00 0.00 4.63
295 296 0.611340 AGCTAACCCGAAGTCTCCGT 60.611 55.000 0.00 0.00 0.00 4.69
296 297 0.458025 GCTAACCCGAAGTCTCCGTG 60.458 60.000 0.00 0.00 0.00 4.94
297 298 0.172803 CTAACCCGAAGTCTCCGTGG 59.827 60.000 0.00 0.00 0.00 4.94
298 299 0.251297 TAACCCGAAGTCTCCGTGGA 60.251 55.000 0.00 0.00 0.00 4.02
299 300 1.117142 AACCCGAAGTCTCCGTGGAA 61.117 55.000 0.00 0.00 0.00 3.53
300 301 1.117142 ACCCGAAGTCTCCGTGGAAA 61.117 55.000 0.00 0.00 0.00 3.13
301 302 0.034337 CCCGAAGTCTCCGTGGAAAA 59.966 55.000 0.00 0.00 0.00 2.29
302 303 1.541670 CCCGAAGTCTCCGTGGAAAAA 60.542 52.381 0.00 0.00 0.00 1.94
346 347 6.687081 TTTTAGTCCGCATATAAGGTTTGG 57.313 37.500 0.00 0.00 0.00 3.28
347 348 3.926058 AGTCCGCATATAAGGTTTGGT 57.074 42.857 0.00 0.00 0.00 3.67
348 349 3.805207 AGTCCGCATATAAGGTTTGGTC 58.195 45.455 0.00 0.00 0.00 4.02
349 350 3.199071 AGTCCGCATATAAGGTTTGGTCA 59.801 43.478 0.00 0.00 0.00 4.02
350 351 3.942748 GTCCGCATATAAGGTTTGGTCAA 59.057 43.478 0.00 0.00 0.00 3.18
351 352 4.396790 GTCCGCATATAAGGTTTGGTCAAA 59.603 41.667 0.00 0.00 0.00 2.69
352 353 4.638421 TCCGCATATAAGGTTTGGTCAAAG 59.362 41.667 0.00 0.00 0.00 2.77
353 354 4.398044 CCGCATATAAGGTTTGGTCAAAGT 59.602 41.667 0.00 0.00 0.00 2.66
354 355 5.448632 CCGCATATAAGGTTTGGTCAAAGTC 60.449 44.000 0.00 0.00 0.00 3.01
355 356 5.123186 CGCATATAAGGTTTGGTCAAAGTCA 59.877 40.000 0.00 0.00 0.00 3.41
356 357 6.348950 CGCATATAAGGTTTGGTCAAAGTCAA 60.349 38.462 0.00 0.00 0.00 3.18
357 358 7.029563 GCATATAAGGTTTGGTCAAAGTCAAG 58.970 38.462 0.00 0.00 0.00 3.02
358 359 3.801114 AAGGTTTGGTCAAAGTCAAGC 57.199 42.857 0.00 0.00 0.00 4.01
359 360 3.018423 AGGTTTGGTCAAAGTCAAGCT 57.982 42.857 0.00 0.00 0.00 3.74
360 361 3.365472 AGGTTTGGTCAAAGTCAAGCTT 58.635 40.909 0.00 0.00 39.52 3.74
377 378 7.478520 TCAAGCTTTGTAGAGTTTGACTAAC 57.521 36.000 0.00 0.00 40.46 2.34
379 380 7.769044 TCAAGCTTTGTAGAGTTTGACTAACTT 59.231 33.333 0.00 0.00 47.00 2.66
380 381 8.398665 CAAGCTTTGTAGAGTTTGACTAACTTT 58.601 33.333 0.00 1.31 47.00 2.66
381 382 7.920738 AGCTTTGTAGAGTTTGACTAACTTTG 58.079 34.615 3.78 0.00 47.00 2.77
382 383 7.553044 AGCTTTGTAGAGTTTGACTAACTTTGT 59.447 33.333 3.78 0.00 47.00 2.83
383 384 8.823818 GCTTTGTAGAGTTTGACTAACTTTGTA 58.176 33.333 3.78 0.00 47.00 2.41
434 435 8.694581 TGAAATCAATATTATCAGATGCACCA 57.305 30.769 0.00 0.00 0.00 4.17
435 436 9.304335 TGAAATCAATATTATCAGATGCACCAT 57.696 29.630 0.00 0.00 0.00 3.55
436 437 9.569167 GAAATCAATATTATCAGATGCACCATG 57.431 33.333 0.00 0.00 0.00 3.66
437 438 8.873186 AATCAATATTATCAGATGCACCATGA 57.127 30.769 0.00 0.00 0.00 3.07
438 439 8.873186 ATCAATATTATCAGATGCACCATGAA 57.127 30.769 0.00 0.00 0.00 2.57
439 440 8.694581 TCAATATTATCAGATGCACCATGAAA 57.305 30.769 0.00 0.00 0.00 2.69
440 441 8.570488 TCAATATTATCAGATGCACCATGAAAC 58.430 33.333 0.00 0.00 0.00 2.78
441 442 4.880886 TTATCAGATGCACCATGAAACG 57.119 40.909 0.00 0.00 0.00 3.60
442 443 2.183478 TCAGATGCACCATGAAACGT 57.817 45.000 0.00 0.00 0.00 3.99
443 444 3.326836 TCAGATGCACCATGAAACGTA 57.673 42.857 0.00 0.00 0.00 3.57
444 445 3.872696 TCAGATGCACCATGAAACGTAT 58.127 40.909 0.00 0.00 0.00 3.06
445 446 4.260985 TCAGATGCACCATGAAACGTATT 58.739 39.130 0.00 0.00 0.00 1.89
446 447 4.699735 TCAGATGCACCATGAAACGTATTT 59.300 37.500 0.00 0.00 0.00 1.40
447 448 5.182950 TCAGATGCACCATGAAACGTATTTT 59.817 36.000 0.00 0.00 0.00 1.82
448 449 5.512788 CAGATGCACCATGAAACGTATTTTC 59.487 40.000 0.00 0.00 43.63 2.29
520 521 9.442047 AATTTGGTCAAATTTTGTGTAGTTTGA 57.558 25.926 13.92 0.00 45.67 2.69
527 528 9.134734 TCAAATTTTGTGTAGTTTGACTTTGAC 57.865 29.630 8.89 0.00 36.11 3.18
528 529 8.379902 CAAATTTTGTGTAGTTTGACTTTGACC 58.620 33.333 0.78 0.00 34.38 4.02
529 530 6.576662 TTTTGTGTAGTTTGACTTTGACCA 57.423 33.333 0.00 0.00 0.00 4.02
530 531 6.576662 TTTGTGTAGTTTGACTTTGACCAA 57.423 33.333 0.00 0.00 0.00 3.67
531 532 6.576662 TTGTGTAGTTTGACTTTGACCAAA 57.423 33.333 0.00 0.00 0.00 3.28
532 533 6.767524 TGTGTAGTTTGACTTTGACCAAAT 57.232 33.333 0.00 0.00 35.14 2.32
533 534 7.164230 TGTGTAGTTTGACTTTGACCAAATT 57.836 32.000 0.00 0.00 35.14 1.82
534 535 7.607250 TGTGTAGTTTGACTTTGACCAAATTT 58.393 30.769 0.00 0.00 35.14 1.82
535 536 8.091449 TGTGTAGTTTGACTTTGACCAAATTTT 58.909 29.630 0.00 0.00 35.14 1.82
536 537 9.575783 GTGTAGTTTGACTTTGACCAAATTTTA 57.424 29.630 0.00 0.00 35.14 1.52
542 543 8.459521 TTGACTTTGACCAAATTTTATATGCG 57.540 30.769 0.00 0.00 0.00 4.73
543 544 7.032580 TGACTTTGACCAAATTTTATATGCGG 58.967 34.615 0.00 0.00 0.00 5.69
544 545 7.094162 TGACTTTGACCAAATTTTATATGCGGA 60.094 33.333 0.00 0.00 0.00 5.54
545 546 7.257722 ACTTTGACCAAATTTTATATGCGGAG 58.742 34.615 0.00 0.00 0.00 4.63
546 547 6.767524 TTGACCAAATTTTATATGCGGAGT 57.232 33.333 0.00 0.00 0.00 3.85
547 548 7.867305 TTGACCAAATTTTATATGCGGAGTA 57.133 32.000 0.00 0.00 0.00 2.59
548 549 7.867305 TGACCAAATTTTATATGCGGAGTAA 57.133 32.000 0.00 0.00 0.00 2.24
549 550 8.282455 TGACCAAATTTTATATGCGGAGTAAA 57.718 30.769 0.00 0.00 0.00 2.01
550 551 8.740906 TGACCAAATTTTATATGCGGAGTAAAA 58.259 29.630 10.79 10.79 33.41 1.52
551 552 9.233232 GACCAAATTTTATATGCGGAGTAAAAG 57.767 33.333 12.91 5.23 32.68 2.27
552 553 8.962679 ACCAAATTTTATATGCGGAGTAAAAGA 58.037 29.630 12.91 0.00 32.68 2.52
553 554 9.450807 CCAAATTTTATATGCGGAGTAAAAGAG 57.549 33.333 12.91 7.35 32.68 2.85
558 559 9.880157 TTTTATATGCGGAGTAAAAGAGTACTT 57.120 29.630 0.00 0.00 34.40 2.24
559 560 8.867112 TTATATGCGGAGTAAAAGAGTACTTG 57.133 34.615 0.00 0.00 34.40 3.16
560 561 3.921677 TGCGGAGTAAAAGAGTACTTGG 58.078 45.455 0.00 0.00 34.40 3.61
561 562 3.575256 TGCGGAGTAAAAGAGTACTTGGA 59.425 43.478 0.00 0.00 34.40 3.53
562 563 4.039488 TGCGGAGTAAAAGAGTACTTGGAA 59.961 41.667 0.00 0.00 34.40 3.53
563 564 4.388165 GCGGAGTAAAAGAGTACTTGGAAC 59.612 45.833 0.00 0.00 34.40 3.62
564 565 5.780984 CGGAGTAAAAGAGTACTTGGAACT 58.219 41.667 0.00 0.00 34.40 3.01
565 566 6.221659 CGGAGTAAAAGAGTACTTGGAACTT 58.778 40.000 0.00 0.00 34.40 2.66
566 567 6.145696 CGGAGTAAAAGAGTACTTGGAACTTG 59.854 42.308 0.00 0.00 34.40 3.16
567 568 6.427242 GGAGTAAAAGAGTACTTGGAACTTGG 59.573 42.308 0.00 0.00 34.40 3.61
568 569 7.133133 AGTAAAAGAGTACTTGGAACTTGGA 57.867 36.000 0.00 0.00 36.39 3.53
569 570 6.990939 AGTAAAAGAGTACTTGGAACTTGGAC 59.009 38.462 0.00 0.00 36.39 4.02
570 571 3.662247 AGAGTACTTGGAACTTGGACG 57.338 47.619 0.00 0.00 0.00 4.79
571 572 3.228453 AGAGTACTTGGAACTTGGACGA 58.772 45.455 0.00 0.00 0.00 4.20
572 573 3.640029 AGAGTACTTGGAACTTGGACGAA 59.360 43.478 0.00 0.00 0.00 3.85
573 574 4.100498 AGAGTACTTGGAACTTGGACGAAA 59.900 41.667 0.00 0.00 0.00 3.46
574 575 4.969484 AGTACTTGGAACTTGGACGAAAT 58.031 39.130 0.00 0.00 0.00 2.17
575 576 4.995487 AGTACTTGGAACTTGGACGAAATC 59.005 41.667 0.00 0.00 0.00 2.17
576 577 4.086706 ACTTGGAACTTGGACGAAATCT 57.913 40.909 0.00 0.00 0.00 2.40
577 578 4.461198 ACTTGGAACTTGGACGAAATCTT 58.539 39.130 0.00 0.00 0.00 2.40
578 579 5.617252 ACTTGGAACTTGGACGAAATCTTA 58.383 37.500 0.00 0.00 0.00 2.10
579 580 5.701290 ACTTGGAACTTGGACGAAATCTTAG 59.299 40.000 0.00 0.00 0.00 2.18
580 581 4.000988 TGGAACTTGGACGAAATCTTAGC 58.999 43.478 0.00 0.00 0.00 3.09
581 582 3.062234 GGAACTTGGACGAAATCTTAGCG 59.938 47.826 0.00 0.00 0.00 4.26
582 583 2.000447 ACTTGGACGAAATCTTAGCGC 59.000 47.619 0.00 0.00 0.00 5.92
583 584 2.271800 CTTGGACGAAATCTTAGCGCT 58.728 47.619 17.26 17.26 0.00 5.92
584 585 3.119245 ACTTGGACGAAATCTTAGCGCTA 60.119 43.478 14.45 14.45 0.00 4.26
585 586 3.513680 TGGACGAAATCTTAGCGCTAA 57.486 42.857 27.17 27.17 0.00 3.09
586 587 3.184541 TGGACGAAATCTTAGCGCTAAC 58.815 45.455 25.53 14.35 0.00 2.34
587 588 2.215812 GGACGAAATCTTAGCGCTAACG 59.784 50.000 25.53 25.84 44.07 3.18
588 589 3.103738 GACGAAATCTTAGCGCTAACGA 58.896 45.455 31.25 26.92 43.93 3.85
589 590 3.106672 ACGAAATCTTAGCGCTAACGAG 58.893 45.455 31.25 21.40 43.93 4.18
590 591 3.106672 CGAAATCTTAGCGCTAACGAGT 58.893 45.455 25.53 20.81 43.93 4.18
591 592 3.178033 CGAAATCTTAGCGCTAACGAGTC 59.822 47.826 25.53 21.54 43.93 3.36
592 593 4.352887 GAAATCTTAGCGCTAACGAGTCT 58.647 43.478 25.53 14.97 43.93 3.24
593 594 4.373348 AATCTTAGCGCTAACGAGTCTT 57.627 40.909 25.53 14.33 43.93 3.01
594 595 3.132629 TCTTAGCGCTAACGAGTCTTG 57.867 47.619 25.53 13.34 43.93 3.02
595 596 1.584308 CTTAGCGCTAACGAGTCTTGC 59.416 52.381 25.53 0.00 43.93 4.01
596 597 0.524414 TAGCGCTAACGAGTCTTGCA 59.476 50.000 16.33 0.00 43.93 4.08
597 598 0.108615 AGCGCTAACGAGTCTTGCAT 60.109 50.000 8.99 0.00 43.93 3.96
598 599 0.721718 GCGCTAACGAGTCTTGCATT 59.278 50.000 0.00 0.00 43.93 3.56
599 600 1.527793 GCGCTAACGAGTCTTGCATTG 60.528 52.381 0.00 0.00 43.93 2.82
600 601 1.527793 CGCTAACGAGTCTTGCATTGC 60.528 52.381 0.46 0.46 43.93 3.56
601 602 1.527793 GCTAACGAGTCTTGCATTGCG 60.528 52.381 3.84 0.00 0.00 4.85
602 603 1.726791 CTAACGAGTCTTGCATTGCGT 59.273 47.619 3.84 0.00 0.00 5.24
603 604 0.235665 AACGAGTCTTGCATTGCGTG 59.764 50.000 3.84 0.00 31.84 5.34
612 613 4.576993 CATTGCGTGCTTTTCCCC 57.423 55.556 0.00 0.00 0.00 4.81
613 614 1.966762 CATTGCGTGCTTTTCCCCT 59.033 52.632 0.00 0.00 0.00 4.79
614 615 0.318120 CATTGCGTGCTTTTCCCCTT 59.682 50.000 0.00 0.00 0.00 3.95
615 616 0.318120 ATTGCGTGCTTTTCCCCTTG 59.682 50.000 0.00 0.00 0.00 3.61
616 617 1.743321 TTGCGTGCTTTTCCCCTTGG 61.743 55.000 0.00 0.00 0.00 3.61
617 618 2.200337 GCGTGCTTTTCCCCTTGGT 61.200 57.895 0.00 0.00 0.00 3.67
618 619 1.744320 GCGTGCTTTTCCCCTTGGTT 61.744 55.000 0.00 0.00 0.00 3.67
619 620 0.750249 CGTGCTTTTCCCCTTGGTTT 59.250 50.000 0.00 0.00 0.00 3.27
620 621 1.537990 CGTGCTTTTCCCCTTGGTTTG 60.538 52.381 0.00 0.00 0.00 2.93
621 622 0.467804 TGCTTTTCCCCTTGGTTTGC 59.532 50.000 0.00 0.00 0.00 3.68
622 623 0.758734 GCTTTTCCCCTTGGTTTGCT 59.241 50.000 0.00 0.00 0.00 3.91
623 624 1.967779 GCTTTTCCCCTTGGTTTGCTA 59.032 47.619 0.00 0.00 0.00 3.49
624 625 2.029020 GCTTTTCCCCTTGGTTTGCTAG 60.029 50.000 0.00 0.00 0.00 3.42
625 626 3.230976 CTTTTCCCCTTGGTTTGCTAGT 58.769 45.455 0.00 0.00 0.00 2.57
626 627 2.579410 TTCCCCTTGGTTTGCTAGTC 57.421 50.000 0.00 0.00 0.00 2.59
627 628 0.323629 TCCCCTTGGTTTGCTAGTCG 59.676 55.000 0.00 0.00 0.00 4.18
628 629 0.676782 CCCCTTGGTTTGCTAGTCGG 60.677 60.000 0.00 0.00 0.00 4.79
629 630 1.305930 CCCTTGGTTTGCTAGTCGGC 61.306 60.000 0.00 0.00 0.00 5.54
630 631 0.321653 CCTTGGTTTGCTAGTCGGCT 60.322 55.000 0.00 0.00 0.00 5.52
631 632 1.523758 CTTGGTTTGCTAGTCGGCTT 58.476 50.000 0.00 0.00 0.00 4.35
632 633 2.614481 CCTTGGTTTGCTAGTCGGCTTA 60.614 50.000 0.00 0.00 0.00 3.09
633 634 2.088950 TGGTTTGCTAGTCGGCTTAC 57.911 50.000 0.00 0.00 0.00 2.34
634 635 1.621814 TGGTTTGCTAGTCGGCTTACT 59.378 47.619 0.00 0.00 0.00 2.24
635 636 2.269172 GGTTTGCTAGTCGGCTTACTC 58.731 52.381 0.00 0.00 0.00 2.59
636 637 2.094130 GGTTTGCTAGTCGGCTTACTCT 60.094 50.000 0.00 0.00 0.00 3.24
637 638 3.586892 GTTTGCTAGTCGGCTTACTCTT 58.413 45.455 0.00 0.00 0.00 2.85
638 639 4.381292 GGTTTGCTAGTCGGCTTACTCTTA 60.381 45.833 0.00 0.00 0.00 2.10
639 640 4.367386 TTGCTAGTCGGCTTACTCTTAC 57.633 45.455 0.00 0.00 0.00 2.34
640 641 2.686915 TGCTAGTCGGCTTACTCTTACC 59.313 50.000 0.00 0.00 0.00 2.85
641 642 2.686915 GCTAGTCGGCTTACTCTTACCA 59.313 50.000 0.00 0.00 0.00 3.25
642 643 3.129988 GCTAGTCGGCTTACTCTTACCAA 59.870 47.826 0.00 0.00 0.00 3.67
643 644 3.870633 AGTCGGCTTACTCTTACCAAG 57.129 47.619 0.00 0.00 0.00 3.61
644 645 3.163467 AGTCGGCTTACTCTTACCAAGT 58.837 45.455 0.00 0.00 0.00 3.16
645 646 3.193056 AGTCGGCTTACTCTTACCAAGTC 59.807 47.826 0.00 0.00 0.00 3.01
646 647 3.057033 GTCGGCTTACTCTTACCAAGTCA 60.057 47.826 0.00 0.00 0.00 3.41
647 648 3.575256 TCGGCTTACTCTTACCAAGTCAA 59.425 43.478 0.00 0.00 0.00 3.18
648 649 4.039488 TCGGCTTACTCTTACCAAGTCAAA 59.961 41.667 0.00 0.00 0.00 2.69
649 650 4.753107 CGGCTTACTCTTACCAAGTCAAAA 59.247 41.667 0.00 0.00 0.00 2.44
650 651 5.411669 CGGCTTACTCTTACCAAGTCAAAAT 59.588 40.000 0.00 0.00 0.00 1.82
651 652 6.072673 CGGCTTACTCTTACCAAGTCAAAATT 60.073 38.462 0.00 0.00 0.00 1.82
652 653 7.118680 CGGCTTACTCTTACCAAGTCAAAATTA 59.881 37.037 0.00 0.00 0.00 1.40
653 654 8.789762 GGCTTACTCTTACCAAGTCAAAATTAA 58.210 33.333 0.00 0.00 0.00 1.40
704 705 1.221021 GGATCCACCACGTTCCTCC 59.779 63.158 6.95 0.00 38.79 4.30
786 798 1.464608 CGCTGCGAGAAGGAATCAAAA 59.535 47.619 18.66 0.00 0.00 2.44
828 846 1.128188 AAGACACCCCACCTGTCTCC 61.128 60.000 1.68 0.00 46.26 3.71
952 970 4.891260 ACCGACGTTTAGAAAAATCTCCT 58.109 39.130 0.00 0.00 0.00 3.69
955 973 5.638234 CCGACGTTTAGAAAAATCTCCTTCT 59.362 40.000 0.00 0.00 35.99 2.85
957 975 6.452611 CGACGTTTAGAAAAATCTCCTTCTCG 60.453 42.308 0.00 0.00 33.89 4.04
996 1014 0.624500 CCTCCTCCCTCCATCCCAAA 60.625 60.000 0.00 0.00 0.00 3.28
1019 1048 3.865929 AACTCGCAGCTCACCACCG 62.866 63.158 0.00 0.00 0.00 4.94
1209 1257 4.332543 AGGACGGCCCCTCTTCCA 62.333 66.667 1.76 0.00 34.66 3.53
1487 1565 1.064803 CTAGATGCAGCGACGACTCTT 59.935 52.381 0.00 0.00 0.00 2.85
1495 1573 1.865622 CGACGACTCTTCTCGCTGC 60.866 63.158 0.00 0.00 37.15 5.25
1549 1635 4.513406 TTTGGTTATAGGCGGAGGAAAT 57.487 40.909 0.00 0.00 0.00 2.17
1692 1809 8.182227 GGGCTACAAATTCAGTTTCAGTATAAC 58.818 37.037 0.00 0.00 0.00 1.89
1741 1875 4.048504 GTTGTTCAAACGGCATTTTAGCT 58.951 39.130 0.00 0.00 34.17 3.32
1744 1878 3.296322 TCAAACGGCATTTTAGCTTGG 57.704 42.857 0.00 0.00 34.17 3.61
1745 1879 2.029470 TCAAACGGCATTTTAGCTTGGG 60.029 45.455 0.00 0.00 34.17 4.12
1746 1880 1.917872 AACGGCATTTTAGCTTGGGA 58.082 45.000 0.00 0.00 34.17 4.37
1747 1881 1.917872 ACGGCATTTTAGCTTGGGAA 58.082 45.000 0.00 0.00 34.17 3.97
1748 1882 2.243810 ACGGCATTTTAGCTTGGGAAA 58.756 42.857 0.00 0.00 34.17 3.13
1752 1886 3.006859 GGCATTTTAGCTTGGGAAACACT 59.993 43.478 0.00 0.00 34.17 3.55
1753 1887 4.503123 GGCATTTTAGCTTGGGAAACACTT 60.503 41.667 0.00 0.00 34.17 3.16
1754 1888 4.686091 GCATTTTAGCTTGGGAAACACTTC 59.314 41.667 0.00 0.00 0.00 3.01
1777 2007 9.642327 CTTCCTATCAGAATTCTATCATGTGAG 57.358 37.037 7.86 0.00 0.00 3.51
1783 2013 8.939201 TCAGAATTCTATCATGTGAGAAGTTC 57.061 34.615 7.86 15.34 35.24 3.01
1796 2037 5.095490 GTGAGAAGTTCTTTTTGTGTGTGG 58.905 41.667 6.88 0.00 0.00 4.17
1841 2084 5.163513 TCCACGTAGGACGATAAAAGAAAC 58.836 41.667 5.94 0.00 46.05 2.78
1861 2105 1.351153 GCCGAAGAGCTGAACTACAC 58.649 55.000 0.00 0.00 0.00 2.90
1898 2142 3.515330 ACCTCGGTTTATTACTCGTGG 57.485 47.619 0.00 0.00 38.69 4.94
1913 2157 7.733402 TTACTCGTGGCACTAACTTTTTATT 57.267 32.000 16.72 0.00 0.00 1.40
1914 2158 5.997385 ACTCGTGGCACTAACTTTTTATTG 58.003 37.500 16.72 0.00 0.00 1.90
1915 2159 5.761234 ACTCGTGGCACTAACTTTTTATTGA 59.239 36.000 16.72 0.00 0.00 2.57
1916 2160 6.261381 ACTCGTGGCACTAACTTTTTATTGAA 59.739 34.615 16.72 0.00 0.00 2.69
1917 2161 7.040686 ACTCGTGGCACTAACTTTTTATTGAAT 60.041 33.333 16.72 0.00 0.00 2.57
1918 2162 8.325421 TCGTGGCACTAACTTTTTATTGAATA 57.675 30.769 16.72 0.00 0.00 1.75
2003 2328 9.278734 GAGAAAATAAAAATTACAAGAGAGCCG 57.721 33.333 0.00 0.00 0.00 5.52
2005 2330 6.451064 AATAAAAATTACAAGAGAGCCGGG 57.549 37.500 2.18 0.00 0.00 5.73
2006 2331 1.751437 AAATTACAAGAGAGCCGGGC 58.249 50.000 12.11 12.11 0.00 6.13
2010 2335 0.398696 TACAAGAGAGCCGGGCAAAA 59.601 50.000 23.09 0.00 0.00 2.44
2020 2345 2.490509 AGCCGGGCAAAACTTATTGTAC 59.509 45.455 23.09 0.00 32.80 2.90
2030 2355 7.603024 GGCAAAACTTATTGTACTAGACAGTCT 59.397 37.037 8.50 8.50 39.88 3.24
2041 2366 8.631480 TGTACTAGACAGTCTAAAAGTCATCA 57.369 34.615 11.57 6.18 36.14 3.07
2049 2374 8.053026 ACAGTCTAAAAGTCATCATACTACGT 57.947 34.615 0.00 0.00 0.00 3.57
2053 2378 4.667519 AAAGTCATCATACTACGTCCCC 57.332 45.455 0.00 0.00 0.00 4.81
2057 2382 4.468510 AGTCATCATACTACGTCCCCAAAA 59.531 41.667 0.00 0.00 0.00 2.44
2058 2383 4.809426 GTCATCATACTACGTCCCCAAAAG 59.191 45.833 0.00 0.00 0.00 2.27
2061 2386 3.196254 TCATACTACGTCCCCAAAAGACC 59.804 47.826 0.00 0.00 0.00 3.85
2064 2389 0.035739 TACGTCCCCAAAAGACCAGC 59.964 55.000 0.00 0.00 0.00 4.85
2073 2398 1.166531 AAAAGACCAGCGCACCAGAC 61.167 55.000 11.47 0.00 0.00 3.51
2076 2401 3.825160 GACCAGCGCACCAGACCAA 62.825 63.158 11.47 0.00 0.00 3.67
2077 2402 3.357079 CCAGCGCACCAGACCAAC 61.357 66.667 11.47 0.00 0.00 3.77
2087 2412 0.606401 CCAGACCAACAACCATCGCT 60.606 55.000 0.00 0.00 0.00 4.93
2097 2422 2.027745 ACAACCATCGCTGATGAAGAGT 60.028 45.455 16.69 6.33 42.09 3.24
2098 2423 3.005554 CAACCATCGCTGATGAAGAGTT 58.994 45.455 16.69 10.65 42.09 3.01
2099 2424 4.183865 CAACCATCGCTGATGAAGAGTTA 58.816 43.478 16.69 0.00 42.09 2.24
2102 2429 5.777802 ACCATCGCTGATGAAGAGTTATAG 58.222 41.667 16.69 2.85 42.09 1.31
2134 2461 8.547967 AAGATCAAACATGTAACTACACGAAT 57.452 30.769 0.00 0.00 39.30 3.34
2140 2467 8.443160 CAAACATGTAACTACACGAATGAAGAT 58.557 33.333 0.00 0.00 39.30 2.40
2145 2472 6.588756 TGTAACTACACGAATGAAGATGAACC 59.411 38.462 0.00 0.00 0.00 3.62
2147 2474 5.547465 ACTACACGAATGAAGATGAACCAA 58.453 37.500 0.00 0.00 0.00 3.67
2165 2492 4.546674 ACCAAATCCAAATAGATCCACCC 58.453 43.478 0.00 0.00 0.00 4.61
2177 2504 0.188342 ATCCACCCAAAACCAGCACT 59.812 50.000 0.00 0.00 0.00 4.40
2178 2505 0.754957 TCCACCCAAAACCAGCACTG 60.755 55.000 0.00 0.00 0.00 3.66
2181 2508 0.755327 ACCCAAAACCAGCACTGACC 60.755 55.000 0.00 0.00 0.00 4.02
2190 2517 2.264794 GCACTGACCGAATCCCGT 59.735 61.111 0.00 0.00 36.31 5.28
2193 2520 0.458543 CACTGACCGAATCCCGTGAG 60.459 60.000 0.00 0.00 36.31 3.51
2197 2524 1.033574 GACCGAATCCCGTGAGATCT 58.966 55.000 0.00 0.00 36.31 2.75
2200 2527 1.269309 CCGAATCCCGTGAGATCTGAC 60.269 57.143 0.00 0.00 36.31 3.51
2202 2529 1.676529 GAATCCCGTGAGATCTGACGA 59.323 52.381 32.20 16.39 42.67 4.20
2216 2543 0.387929 TGACGAAGACACACCTCCAC 59.612 55.000 0.00 0.00 0.00 4.02
2222 2549 3.738281 CGAAGACACACCTCCACATATCC 60.738 52.174 0.00 0.00 0.00 2.59
2225 2552 3.452627 AGACACACCTCCACATATCCTTC 59.547 47.826 0.00 0.00 0.00 3.46
2226 2553 3.452627 GACACACCTCCACATATCCTTCT 59.547 47.826 0.00 0.00 0.00 2.85
2227 2554 3.452627 ACACACCTCCACATATCCTTCTC 59.547 47.826 0.00 0.00 0.00 2.87
2245 2572 1.591594 CCGACGCTATTCGCACCAT 60.592 57.895 0.00 0.00 43.23 3.55
2250 2577 1.069090 GCTATTCGCACCATCGGGA 59.931 57.895 0.00 0.00 38.92 5.14
2251 2578 1.222115 GCTATTCGCACCATCGGGAC 61.222 60.000 0.00 0.00 38.92 4.46
2252 2579 0.104120 CTATTCGCACCATCGGGACA 59.896 55.000 0.00 0.00 38.05 4.02
2253 2580 0.537653 TATTCGCACCATCGGGACAA 59.462 50.000 0.00 0.00 38.05 3.18
2259 2587 1.541233 GCACCATCGGGACAAGGATAG 60.541 57.143 0.00 0.00 38.05 2.08
2266 2594 1.481871 GGGACAAGGATAGGACGTGA 58.518 55.000 0.00 0.00 0.00 4.35
2270 2598 2.359531 GACAAGGATAGGACGTGAGAGG 59.640 54.545 0.00 0.00 0.00 3.69
2286 2614 5.460419 CGTGAGAGGCATTATTTCTACTGAC 59.540 44.000 0.00 0.00 0.00 3.51
2287 2615 5.460419 GTGAGAGGCATTATTTCTACTGACG 59.540 44.000 0.00 0.00 0.00 4.35
2288 2616 4.950050 AGAGGCATTATTTCTACTGACGG 58.050 43.478 0.00 0.00 0.00 4.79
2289 2617 4.649674 AGAGGCATTATTTCTACTGACGGA 59.350 41.667 0.00 0.00 0.00 4.69
2290 2618 5.305644 AGAGGCATTATTTCTACTGACGGAT 59.694 40.000 0.00 0.00 0.00 4.18
2291 2619 6.493802 AGAGGCATTATTTCTACTGACGGATA 59.506 38.462 0.00 0.00 0.00 2.59
2292 2620 7.179338 AGAGGCATTATTTCTACTGACGGATAT 59.821 37.037 0.00 0.00 0.00 1.63
2293 2621 7.324178 AGGCATTATTTCTACTGACGGATATC 58.676 38.462 0.00 0.00 0.00 1.63
2299 2627 0.956633 TACTGACGGATATCGCCACC 59.043 55.000 0.00 0.00 43.89 4.61
2327 2655 9.221775 CCACTAACTTTTTATAACGATGATTGC 57.778 33.333 0.00 0.00 0.00 3.56
2357 2685 7.439655 GCTTATCAGAAGGAAAGATCGTGTTAT 59.560 37.037 0.00 0.00 0.00 1.89
2394 2747 5.286438 TGCGCAATCTACGTTGTATATTCT 58.714 37.500 8.16 0.00 0.00 2.40
2395 2748 5.174943 TGCGCAATCTACGTTGTATATTCTG 59.825 40.000 8.16 0.00 0.00 3.02
2396 2749 5.175126 GCGCAATCTACGTTGTATATTCTGT 59.825 40.000 0.30 0.00 0.00 3.41
2397 2750 6.292168 GCGCAATCTACGTTGTATATTCTGTT 60.292 38.462 0.30 0.00 0.00 3.16
2398 2751 7.057402 CGCAATCTACGTTGTATATTCTGTTG 58.943 38.462 0.00 0.00 0.00 3.33
2399 2752 7.345192 GCAATCTACGTTGTATATTCTGTTGG 58.655 38.462 0.00 0.00 0.00 3.77
2400 2753 7.518370 GCAATCTACGTTGTATATTCTGTTGGG 60.518 40.741 0.00 0.00 0.00 4.12
2401 2754 5.909477 TCTACGTTGTATATTCTGTTGGGG 58.091 41.667 0.00 0.00 0.00 4.96
2402 2755 4.829872 ACGTTGTATATTCTGTTGGGGA 57.170 40.909 0.00 0.00 0.00 4.81
2403 2756 5.168647 ACGTTGTATATTCTGTTGGGGAA 57.831 39.130 0.00 0.00 0.00 3.97
2409 3234 0.958822 ATTCTGTTGGGGAACGTTGC 59.041 50.000 11.85 11.85 0.00 4.17
2410 3235 0.394488 TTCTGTTGGGGAACGTTGCA 60.394 50.000 21.74 0.00 0.00 4.08
2411 3236 0.817634 TCTGTTGGGGAACGTTGCAG 60.818 55.000 21.74 9.73 0.00 4.41
2412 3237 0.817634 CTGTTGGGGAACGTTGCAGA 60.818 55.000 21.74 3.97 0.00 4.26
2414 3239 0.741915 GTTGGGGAACGTTGCAGAAA 59.258 50.000 21.74 9.26 0.00 2.52
2416 3241 0.741915 TGGGGAACGTTGCAGAAAAC 59.258 50.000 21.74 2.56 0.00 2.43
2417 3242 0.741915 GGGGAACGTTGCAGAAAACA 59.258 50.000 21.74 0.00 0.00 2.83
2443 3268 6.702716 AAAATTTCCTACGTTTCACCAAGA 57.297 33.333 0.00 0.00 0.00 3.02
2444 3269 6.894339 AAATTTCCTACGTTTCACCAAGAT 57.106 33.333 0.00 0.00 0.00 2.40
2445 3270 6.496338 AATTTCCTACGTTTCACCAAGATC 57.504 37.500 0.00 0.00 0.00 2.75
2446 3271 4.610605 TTCCTACGTTTCACCAAGATCA 57.389 40.909 0.00 0.00 0.00 2.92
2447 3272 4.610605 TCCTACGTTTCACCAAGATCAA 57.389 40.909 0.00 0.00 0.00 2.57
2448 3273 5.160607 TCCTACGTTTCACCAAGATCAAT 57.839 39.130 0.00 0.00 0.00 2.57
2449 3274 5.175859 TCCTACGTTTCACCAAGATCAATC 58.824 41.667 0.00 0.00 0.00 2.67
2450 3275 5.046591 TCCTACGTTTCACCAAGATCAATCT 60.047 40.000 0.00 0.00 39.22 2.40
2454 3279 5.586243 ACGTTTCACCAAGATCAATCTATGG 59.414 40.000 14.46 14.46 39.18 2.74
2455 3280 5.817296 CGTTTCACCAAGATCAATCTATGGA 59.183 40.000 19.34 3.36 37.92 3.41
2456 3281 6.018425 CGTTTCACCAAGATCAATCTATGGAG 60.018 42.308 19.34 14.57 37.92 3.86
2458 3283 6.166984 TCACCAAGATCAATCTATGGAGTC 57.833 41.667 19.34 0.00 37.92 3.36
2459 3284 5.662657 TCACCAAGATCAATCTATGGAGTCA 59.337 40.000 19.34 3.88 37.92 3.41
2461 3286 6.259608 CACCAAGATCAATCTATGGAGTCAAC 59.740 42.308 19.34 0.00 37.92 3.18
2462 3287 6.157645 ACCAAGATCAATCTATGGAGTCAACT 59.842 38.462 19.34 0.00 37.92 3.16
2464 3289 7.871973 CCAAGATCAATCTATGGAGTCAACTAG 59.128 40.741 12.26 0.00 37.31 2.57
2465 3290 6.991938 AGATCAATCTATGGAGTCAACTAGC 58.008 40.000 0.00 0.00 34.85 3.42
2468 3293 7.129457 TCAATCTATGGAGTCAACTAGCAAT 57.871 36.000 0.00 0.00 0.00 3.56
2469 3294 6.988580 TCAATCTATGGAGTCAACTAGCAATG 59.011 38.462 0.00 0.00 0.00 2.82
2472 3297 5.893824 TCTATGGAGTCAACTAGCAATGAGA 59.106 40.000 0.00 0.00 0.00 3.27
2474 3299 3.196469 TGGAGTCAACTAGCAATGAGAGG 59.804 47.826 0.00 0.00 0.00 3.69
2476 3301 4.441356 GGAGTCAACTAGCAATGAGAGGAG 60.441 50.000 0.00 0.00 0.00 3.69
2478 3303 4.402155 AGTCAACTAGCAATGAGAGGAGAG 59.598 45.833 0.00 0.00 0.00 3.20
2481 3306 2.430332 ACTAGCAATGAGAGGAGAGTGC 59.570 50.000 0.00 0.00 0.00 4.40
2483 3308 1.838715 AGCAATGAGAGGAGAGTGCAT 59.161 47.619 0.00 0.00 34.44 3.96
2492 5378 4.148838 AGAGGAGAGTGCATCTACATACC 58.851 47.826 9.98 3.25 42.01 2.73
2493 5379 3.235200 AGGAGAGTGCATCTACATACCC 58.765 50.000 9.98 2.71 42.01 3.69
2494 5380 3.116939 AGGAGAGTGCATCTACATACCCT 60.117 47.826 9.98 4.47 42.01 4.34
2499 5385 5.303078 AGAGTGCATCTACATACCCTTGTAG 59.697 44.000 5.47 5.47 46.85 2.74
2505 5391 2.795175 ACATACCCTTGTAGATCGCG 57.205 50.000 0.00 0.00 0.00 5.87
2506 5392 2.304092 ACATACCCTTGTAGATCGCGA 58.696 47.619 13.09 13.09 0.00 5.87
2507 5393 2.293677 ACATACCCTTGTAGATCGCGAG 59.706 50.000 16.66 0.00 0.00 5.03
2508 5394 0.666913 TACCCTTGTAGATCGCGAGC 59.333 55.000 18.21 18.21 0.00 5.03
2509 5395 1.658717 CCCTTGTAGATCGCGAGCG 60.659 63.158 19.77 11.64 41.35 5.03
2510 5396 1.658717 CCTTGTAGATCGCGAGCGG 60.659 63.158 19.77 9.89 40.25 5.52
2511 5397 1.355563 CTTGTAGATCGCGAGCGGA 59.644 57.895 19.77 8.43 40.25 5.54
2512 5398 0.248498 CTTGTAGATCGCGAGCGGAA 60.248 55.000 19.77 11.67 40.25 4.30
2513 5399 0.248498 TTGTAGATCGCGAGCGGAAG 60.248 55.000 19.77 0.00 40.25 3.46
2534 5420 2.762535 GTTCAAGAGAACGGGGATGA 57.237 50.000 0.00 0.00 44.11 2.92
2536 5422 2.939103 GTTCAAGAGAACGGGGATGATG 59.061 50.000 0.00 0.00 44.11 3.07
2537 5423 1.486310 TCAAGAGAACGGGGATGATGG 59.514 52.381 0.00 0.00 0.00 3.51
2538 5424 1.486310 CAAGAGAACGGGGATGATGGA 59.514 52.381 0.00 0.00 0.00 3.41
2539 5425 1.418334 AGAGAACGGGGATGATGGAG 58.582 55.000 0.00 0.00 0.00 3.86
2541 5427 1.069358 GAGAACGGGGATGATGGAGTC 59.931 57.143 0.00 0.00 0.00 3.36
2543 5429 0.976073 AACGGGGATGATGGAGTCGT 60.976 55.000 0.00 0.00 0.00 4.34
2544 5430 0.106369 ACGGGGATGATGGAGTCGTA 60.106 55.000 0.00 0.00 0.00 3.43
2545 5431 0.314302 CGGGGATGATGGAGTCGTAC 59.686 60.000 0.00 0.00 0.00 3.67
2546 5432 1.705873 GGGGATGATGGAGTCGTACT 58.294 55.000 0.00 0.00 0.00 2.73
2547 5433 1.614413 GGGGATGATGGAGTCGTACTC 59.386 57.143 6.50 6.50 44.32 2.59
2548 5434 1.267261 GGGATGATGGAGTCGTACTCG 59.733 57.143 8.33 0.00 45.96 4.18
2549 5435 1.335142 GGATGATGGAGTCGTACTCGC 60.335 57.143 8.33 3.96 45.96 5.03
2550 5436 0.669077 ATGATGGAGTCGTACTCGCC 59.331 55.000 8.33 0.00 45.96 5.54
2554 5440 2.393768 GGAGTCGTACTCGCCGTGA 61.394 63.158 8.33 0.00 45.96 4.35
2572 6328 2.917933 TGATCCAAATCACCGATGACC 58.082 47.619 0.00 0.00 37.79 4.02
2573 6329 2.238395 TGATCCAAATCACCGATGACCA 59.762 45.455 0.00 0.00 37.79 4.02
2576 6332 2.039746 TCCAAATCACCGATGACCAAGT 59.960 45.455 0.00 0.00 37.79 3.16
2577 6333 2.162208 CCAAATCACCGATGACCAAGTG 59.838 50.000 0.00 0.00 37.79 3.16
2578 6334 1.453155 AATCACCGATGACCAAGTGC 58.547 50.000 0.00 0.00 37.79 4.40
2580 6336 2.047274 ACCGATGACCAAGTGCCG 60.047 61.111 0.00 0.00 0.00 5.69
2582 6338 1.375396 CCGATGACCAAGTGCCGAA 60.375 57.895 0.00 0.00 0.00 4.30
2583 6339 1.635663 CCGATGACCAAGTGCCGAAC 61.636 60.000 0.00 0.00 0.00 3.95
2584 6340 1.787847 GATGACCAAGTGCCGAACG 59.212 57.895 0.00 0.00 0.00 3.95
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 7.849804 ACTTATCACATAAGCGAAATTGTCT 57.150 32.000 3.60 0.00 44.73 3.41
21 22 9.880157 AGCACGTCTTTCCTTATTAAATACTTA 57.120 29.630 0.00 0.00 0.00 2.24
22 23 8.788325 AGCACGTCTTTCCTTATTAAATACTT 57.212 30.769 0.00 0.00 0.00 2.24
23 24 8.665685 CAAGCACGTCTTTCCTTATTAAATACT 58.334 33.333 0.00 0.00 31.27 2.12
24 25 8.448615 ACAAGCACGTCTTTCCTTATTAAATAC 58.551 33.333 0.00 0.00 31.27 1.89
25 26 8.447833 CACAAGCACGTCTTTCCTTATTAAATA 58.552 33.333 0.00 0.00 31.27 1.40
26 27 7.305474 CACAAGCACGTCTTTCCTTATTAAAT 58.695 34.615 0.00 0.00 31.27 1.40
27 28 6.293735 CCACAAGCACGTCTTTCCTTATTAAA 60.294 38.462 0.00 0.00 31.27 1.52
28 29 5.180492 CCACAAGCACGTCTTTCCTTATTAA 59.820 40.000 0.00 0.00 31.27 1.40
29 30 4.693566 CCACAAGCACGTCTTTCCTTATTA 59.306 41.667 0.00 0.00 31.27 0.98
30 31 3.502211 CCACAAGCACGTCTTTCCTTATT 59.498 43.478 0.00 0.00 31.27 1.40
31 32 3.074412 CCACAAGCACGTCTTTCCTTAT 58.926 45.455 0.00 0.00 31.27 1.73
32 33 2.158871 ACCACAAGCACGTCTTTCCTTA 60.159 45.455 0.00 0.00 31.27 2.69
33 34 1.308998 CCACAAGCACGTCTTTCCTT 58.691 50.000 0.00 0.00 31.27 3.36
34 35 0.180406 ACCACAAGCACGTCTTTCCT 59.820 50.000 0.00 0.00 31.27 3.36
35 36 1.873698 TACCACAAGCACGTCTTTCC 58.126 50.000 0.00 0.00 31.27 3.13
36 37 2.610374 TGTTACCACAAGCACGTCTTTC 59.390 45.455 0.00 0.00 31.27 2.62
37 38 2.634600 TGTTACCACAAGCACGTCTTT 58.365 42.857 0.00 0.00 31.27 2.52
38 39 2.319136 TGTTACCACAAGCACGTCTT 57.681 45.000 0.00 0.00 34.78 3.01
39 40 2.543777 ATGTTACCACAAGCACGTCT 57.456 45.000 0.00 0.00 36.16 4.18
40 41 4.939509 ATTATGTTACCACAAGCACGTC 57.060 40.909 0.00 0.00 36.16 4.34
41 42 8.671384 AATATATTATGTTACCACAAGCACGT 57.329 30.769 0.00 0.00 36.16 4.49
55 56 8.702438 GCGTTGTGTTACGGTAATATATTATGT 58.298 33.333 8.40 11.90 41.65 2.29
68 69 1.864176 GGGAAGCGTTGTGTTACGG 59.136 57.895 0.00 0.00 41.65 4.02
69 70 0.940519 TCGGGAAGCGTTGTGTTACG 60.941 55.000 0.00 0.00 44.09 3.18
70 71 1.127951 CATCGGGAAGCGTTGTGTTAC 59.872 52.381 0.00 0.00 0.00 2.50
71 72 1.434555 CATCGGGAAGCGTTGTGTTA 58.565 50.000 0.00 0.00 0.00 2.41
72 73 1.852067 GCATCGGGAAGCGTTGTGTT 61.852 55.000 0.00 0.00 0.00 3.32
73 74 2.325082 GCATCGGGAAGCGTTGTGT 61.325 57.895 0.00 0.00 0.00 3.72
74 75 1.851021 TTGCATCGGGAAGCGTTGTG 61.851 55.000 0.00 0.00 0.00 3.33
75 76 1.169661 TTTGCATCGGGAAGCGTTGT 61.170 50.000 0.00 0.00 0.00 3.32
76 77 0.039617 TTTTGCATCGGGAAGCGTTG 60.040 50.000 0.00 0.00 0.00 4.10
77 78 0.887933 ATTTTGCATCGGGAAGCGTT 59.112 45.000 0.00 0.00 0.00 4.84
78 79 0.171007 CATTTTGCATCGGGAAGCGT 59.829 50.000 0.00 0.00 0.00 5.07
79 80 0.451383 TCATTTTGCATCGGGAAGCG 59.549 50.000 0.00 0.00 0.00 4.68
80 81 1.474077 ACTCATTTTGCATCGGGAAGC 59.526 47.619 0.00 0.00 0.00 3.86
81 82 3.855689 AACTCATTTTGCATCGGGAAG 57.144 42.857 0.00 0.00 0.00 3.46
82 83 5.417266 TCATAAACTCATTTTGCATCGGGAA 59.583 36.000 0.00 0.00 0.00 3.97
83 84 4.946772 TCATAAACTCATTTTGCATCGGGA 59.053 37.500 0.00 0.00 0.00 5.14
84 85 5.247507 TCATAAACTCATTTTGCATCGGG 57.752 39.130 0.00 0.00 0.00 5.14
85 86 4.736793 GCTCATAAACTCATTTTGCATCGG 59.263 41.667 0.00 0.00 0.00 4.18
86 87 5.575957 AGCTCATAAACTCATTTTGCATCG 58.424 37.500 0.00 0.00 0.00 3.84
96 97 9.394767 TGCTTGATTTATTAGCTCATAAACTCA 57.605 29.630 13.87 14.37 32.61 3.41
103 104 9.790344 AGTAGATTGCTTGATTTATTAGCTCAT 57.210 29.630 0.00 0.00 35.93 2.90
104 105 9.265901 GAGTAGATTGCTTGATTTATTAGCTCA 57.734 33.333 0.00 0.00 35.93 4.26
105 106 9.487790 AGAGTAGATTGCTTGATTTATTAGCTC 57.512 33.333 0.00 0.00 35.93 4.09
119 120 9.804758 GTGTAAAGTAACATAGAGTAGATTGCT 57.195 33.333 0.00 0.00 0.00 3.91
120 121 9.804758 AGTGTAAAGTAACATAGAGTAGATTGC 57.195 33.333 0.00 0.00 0.00 3.56
175 176 9.712305 GGAGTAATTTATACTAGTGTCATGCAT 57.288 33.333 5.39 0.00 0.00 3.96
176 177 8.148351 GGGAGTAATTTATACTAGTGTCATGCA 58.852 37.037 5.39 0.00 0.00 3.96
177 178 7.603024 GGGGAGTAATTTATACTAGTGTCATGC 59.397 40.741 5.39 0.00 0.00 4.06
178 179 8.647796 TGGGGAGTAATTTATACTAGTGTCATG 58.352 37.037 5.39 0.00 0.00 3.07
179 180 8.648693 GTGGGGAGTAATTTATACTAGTGTCAT 58.351 37.037 5.39 0.00 0.00 3.06
180 181 7.842743 AGTGGGGAGTAATTTATACTAGTGTCA 59.157 37.037 5.39 0.00 0.00 3.58
181 182 8.247666 AGTGGGGAGTAATTTATACTAGTGTC 57.752 38.462 5.39 0.00 0.00 3.67
182 183 9.893975 ATAGTGGGGAGTAATTTATACTAGTGT 57.106 33.333 5.39 0.39 0.00 3.55
186 187 9.317827 GGTCATAGTGGGGAGTAATTTATACTA 57.682 37.037 0.00 0.00 0.00 1.82
187 188 7.792736 TGGTCATAGTGGGGAGTAATTTATACT 59.207 37.037 0.00 0.00 0.00 2.12
188 189 7.970102 TGGTCATAGTGGGGAGTAATTTATAC 58.030 38.462 0.00 0.00 0.00 1.47
189 190 7.256547 GCTGGTCATAGTGGGGAGTAATTTATA 60.257 40.741 0.00 0.00 0.00 0.98
190 191 6.465894 GCTGGTCATAGTGGGGAGTAATTTAT 60.466 42.308 0.00 0.00 0.00 1.40
191 192 5.163237 GCTGGTCATAGTGGGGAGTAATTTA 60.163 44.000 0.00 0.00 0.00 1.40
192 193 4.385310 GCTGGTCATAGTGGGGAGTAATTT 60.385 45.833 0.00 0.00 0.00 1.82
193 194 3.136626 GCTGGTCATAGTGGGGAGTAATT 59.863 47.826 0.00 0.00 0.00 1.40
194 195 2.706190 GCTGGTCATAGTGGGGAGTAAT 59.294 50.000 0.00 0.00 0.00 1.89
195 196 2.116238 GCTGGTCATAGTGGGGAGTAA 58.884 52.381 0.00 0.00 0.00 2.24
196 197 1.691482 GGCTGGTCATAGTGGGGAGTA 60.691 57.143 0.00 0.00 0.00 2.59
197 198 0.983378 GGCTGGTCATAGTGGGGAGT 60.983 60.000 0.00 0.00 0.00 3.85
198 199 0.692419 AGGCTGGTCATAGTGGGGAG 60.692 60.000 0.00 0.00 0.00 4.30
199 200 0.253160 AAGGCTGGTCATAGTGGGGA 60.253 55.000 0.00 0.00 0.00 4.81
200 201 1.507140 TAAGGCTGGTCATAGTGGGG 58.493 55.000 0.00 0.00 0.00 4.96
201 202 2.705658 TGATAAGGCTGGTCATAGTGGG 59.294 50.000 0.00 0.00 0.00 4.61
202 203 4.141620 ACTTGATAAGGCTGGTCATAGTGG 60.142 45.833 3.31 0.00 0.00 4.00
203 204 5.028549 ACTTGATAAGGCTGGTCATAGTG 57.971 43.478 3.31 0.00 0.00 2.74
204 205 4.716784 TGACTTGATAAGGCTGGTCATAGT 59.283 41.667 3.31 8.91 37.45 2.12
205 206 5.069648 TCTGACTTGATAAGGCTGGTCATAG 59.930 44.000 3.31 6.52 37.45 2.23
206 207 4.962362 TCTGACTTGATAAGGCTGGTCATA 59.038 41.667 3.31 0.00 37.45 2.15
207 208 3.776969 TCTGACTTGATAAGGCTGGTCAT 59.223 43.478 3.31 0.00 37.45 3.06
208 209 3.173151 TCTGACTTGATAAGGCTGGTCA 58.827 45.455 0.00 0.00 37.45 4.02
209 210 3.895232 TCTGACTTGATAAGGCTGGTC 57.105 47.619 0.00 0.00 37.45 4.02
210 211 4.851639 ATTCTGACTTGATAAGGCTGGT 57.148 40.909 0.00 0.00 37.45 4.00
211 212 5.296283 CAGAATTCTGACTTGATAAGGCTGG 59.704 44.000 28.13 0.00 46.59 4.85
212 213 5.220815 GCAGAATTCTGACTTGATAAGGCTG 60.221 44.000 34.43 7.61 46.59 4.85
213 214 4.880696 GCAGAATTCTGACTTGATAAGGCT 59.119 41.667 34.43 0.00 46.59 4.58
214 215 4.637534 TGCAGAATTCTGACTTGATAAGGC 59.362 41.667 34.43 17.12 46.59 4.35
215 216 5.879223 AGTGCAGAATTCTGACTTGATAAGG 59.121 40.000 34.43 8.00 46.59 2.69
216 217 6.981762 AGTGCAGAATTCTGACTTGATAAG 57.018 37.500 34.43 8.49 46.59 1.73
222 223 4.274459 GTCACAAGTGCAGAATTCTGACTT 59.726 41.667 34.43 30.91 46.59 3.01
223 224 3.812053 GTCACAAGTGCAGAATTCTGACT 59.188 43.478 34.43 28.09 46.59 3.41
224 225 3.812053 AGTCACAAGTGCAGAATTCTGAC 59.188 43.478 34.43 26.69 46.59 3.51
225 226 4.077300 AGTCACAAGTGCAGAATTCTGA 57.923 40.909 34.43 18.74 46.59 3.27
226 227 4.534168 CAAGTCACAAGTGCAGAATTCTG 58.466 43.478 27.82 27.82 46.40 3.02
227 228 3.004106 GCAAGTCACAAGTGCAGAATTCT 59.996 43.478 0.88 0.88 38.19 2.40
228 229 3.303406 GCAAGTCACAAGTGCAGAATTC 58.697 45.455 0.00 0.00 38.19 2.17
229 230 2.035066 GGCAAGTCACAAGTGCAGAATT 59.965 45.455 0.00 0.00 40.12 2.17
230 231 1.610522 GGCAAGTCACAAGTGCAGAAT 59.389 47.619 0.00 0.00 40.12 2.40
231 232 1.024271 GGCAAGTCACAAGTGCAGAA 58.976 50.000 0.00 0.00 40.12 3.02
232 233 0.107263 TGGCAAGTCACAAGTGCAGA 60.107 50.000 0.00 0.00 40.12 4.26
233 234 0.029834 GTGGCAAGTCACAAGTGCAG 59.970 55.000 0.00 0.00 40.12 4.41
234 235 0.394216 AGTGGCAAGTCACAAGTGCA 60.394 50.000 7.62 0.00 40.12 4.57
235 236 1.593196 TAGTGGCAAGTCACAAGTGC 58.407 50.000 7.62 0.00 39.93 4.40
236 237 5.940192 TTAATAGTGGCAAGTCACAAGTG 57.060 39.130 7.62 0.00 39.93 3.16
237 238 6.320164 TGTTTTAATAGTGGCAAGTCACAAGT 59.680 34.615 7.62 0.00 39.93 3.16
238 239 6.636850 GTGTTTTAATAGTGGCAAGTCACAAG 59.363 38.462 7.62 0.00 39.93 3.16
239 240 6.095580 TGTGTTTTAATAGTGGCAAGTCACAA 59.904 34.615 7.62 0.00 39.93 3.33
240 241 5.590663 TGTGTTTTAATAGTGGCAAGTCACA 59.409 36.000 7.62 0.00 39.93 3.58
241 242 5.912955 GTGTGTTTTAATAGTGGCAAGTCAC 59.087 40.000 0.00 0.00 37.89 3.67
242 243 5.277586 CGTGTGTTTTAATAGTGGCAAGTCA 60.278 40.000 0.00 0.00 0.00 3.41
243 244 5.144359 CGTGTGTTTTAATAGTGGCAAGTC 58.856 41.667 0.00 0.00 0.00 3.01
244 245 4.555906 GCGTGTGTTTTAATAGTGGCAAGT 60.556 41.667 0.00 0.00 0.00 3.16
245 246 3.911964 GCGTGTGTTTTAATAGTGGCAAG 59.088 43.478 0.00 0.00 0.00 4.01
246 247 3.315470 TGCGTGTGTTTTAATAGTGGCAA 59.685 39.130 0.00 0.00 0.00 4.52
247 248 2.879026 TGCGTGTGTTTTAATAGTGGCA 59.121 40.909 0.00 0.00 0.00 4.92
248 249 3.546002 TGCGTGTGTTTTAATAGTGGC 57.454 42.857 0.00 0.00 0.00 5.01
249 250 4.323336 GCATTGCGTGTGTTTTAATAGTGG 59.677 41.667 0.00 0.00 0.00 4.00
250 251 4.914504 TGCATTGCGTGTGTTTTAATAGTG 59.085 37.500 3.84 0.00 0.00 2.74
251 252 5.114785 TGCATTGCGTGTGTTTTAATAGT 57.885 34.783 3.84 0.00 0.00 2.12
252 253 4.030529 GCTGCATTGCGTGTGTTTTAATAG 59.969 41.667 3.84 0.00 0.00 1.73
253 254 3.917380 GCTGCATTGCGTGTGTTTTAATA 59.083 39.130 3.84 0.00 0.00 0.98
254 255 2.730928 GCTGCATTGCGTGTGTTTTAAT 59.269 40.909 3.84 0.00 0.00 1.40
255 256 2.123342 GCTGCATTGCGTGTGTTTTAA 58.877 42.857 3.84 0.00 0.00 1.52
256 257 1.066152 TGCTGCATTGCGTGTGTTTTA 59.934 42.857 0.00 0.00 35.36 1.52
257 258 0.179116 TGCTGCATTGCGTGTGTTTT 60.179 45.000 0.00 0.00 35.36 2.43
258 259 0.595567 CTGCTGCATTGCGTGTGTTT 60.596 50.000 1.31 0.00 35.36 2.83
259 260 1.008194 CTGCTGCATTGCGTGTGTT 60.008 52.632 1.31 0.00 35.36 3.32
260 261 2.640989 CTGCTGCATTGCGTGTGT 59.359 55.556 1.31 0.00 35.36 3.72
261 262 1.914531 TAGCTGCTGCATTGCGTGTG 61.915 55.000 18.42 0.00 42.74 3.82
262 263 1.236616 TTAGCTGCTGCATTGCGTGT 61.237 50.000 18.42 0.00 42.74 4.49
263 264 0.795735 GTTAGCTGCTGCATTGCGTG 60.796 55.000 18.42 0.65 42.74 5.34
264 265 1.503542 GTTAGCTGCTGCATTGCGT 59.496 52.632 18.42 0.00 42.74 5.24
265 266 1.226491 GGTTAGCTGCTGCATTGCG 60.226 57.895 18.42 0.24 42.74 4.85
266 267 1.140375 GGGTTAGCTGCTGCATTGC 59.860 57.895 18.42 3.97 42.74 3.56
267 268 1.026182 TCGGGTTAGCTGCTGCATTG 61.026 55.000 18.42 0.00 42.74 2.82
268 269 0.322456 TTCGGGTTAGCTGCTGCATT 60.322 50.000 18.42 0.14 42.74 3.56
269 270 0.745845 CTTCGGGTTAGCTGCTGCAT 60.746 55.000 18.42 5.64 42.74 3.96
270 271 1.375908 CTTCGGGTTAGCTGCTGCA 60.376 57.895 18.42 0.88 42.74 4.41
271 272 1.362406 GACTTCGGGTTAGCTGCTGC 61.362 60.000 13.43 7.62 40.05 5.25
272 273 0.247736 AGACTTCGGGTTAGCTGCTG 59.752 55.000 13.43 0.00 0.00 4.41
273 274 0.533032 GAGACTTCGGGTTAGCTGCT 59.467 55.000 7.57 7.57 0.00 4.24
274 275 0.460459 GGAGACTTCGGGTTAGCTGC 60.460 60.000 0.00 0.00 0.00 5.25
275 276 0.179134 CGGAGACTTCGGGTTAGCTG 60.179 60.000 0.00 0.00 0.00 4.24
276 277 0.611340 ACGGAGACTTCGGGTTAGCT 60.611 55.000 8.30 0.00 0.00 3.32
277 278 0.458025 CACGGAGACTTCGGGTTAGC 60.458 60.000 8.30 0.00 0.00 3.09
278 279 0.172803 CCACGGAGACTTCGGGTTAG 59.827 60.000 8.30 0.00 0.00 2.34
279 280 0.251297 TCCACGGAGACTTCGGGTTA 60.251 55.000 8.30 0.00 0.00 2.85
280 281 1.117142 TTCCACGGAGACTTCGGGTT 61.117 55.000 8.30 0.00 0.00 4.11
281 282 1.117142 TTTCCACGGAGACTTCGGGT 61.117 55.000 8.30 0.00 0.00 5.28
282 283 0.034337 TTTTCCACGGAGACTTCGGG 59.966 55.000 8.30 2.52 0.00 5.14
283 284 1.873698 TTTTTCCACGGAGACTTCGG 58.126 50.000 8.30 0.00 0.00 4.30
322 323 6.660094 ACCAAACCTTATATGCGGACTAAAAA 59.340 34.615 0.00 0.00 0.00 1.94
323 324 6.181908 ACCAAACCTTATATGCGGACTAAAA 58.818 36.000 0.00 0.00 0.00 1.52
324 325 5.747342 ACCAAACCTTATATGCGGACTAAA 58.253 37.500 0.00 0.00 0.00 1.85
325 326 5.104859 TGACCAAACCTTATATGCGGACTAA 60.105 40.000 0.00 0.00 0.00 2.24
326 327 4.406326 TGACCAAACCTTATATGCGGACTA 59.594 41.667 0.00 0.00 0.00 2.59
327 328 3.199071 TGACCAAACCTTATATGCGGACT 59.801 43.478 0.00 0.00 0.00 3.85
328 329 3.537580 TGACCAAACCTTATATGCGGAC 58.462 45.455 0.00 0.00 0.00 4.79
329 330 3.916359 TGACCAAACCTTATATGCGGA 57.084 42.857 0.00 0.00 0.00 5.54
330 331 4.398044 ACTTTGACCAAACCTTATATGCGG 59.602 41.667 0.00 0.00 0.00 5.69
331 332 5.123186 TGACTTTGACCAAACCTTATATGCG 59.877 40.000 0.00 0.00 0.00 4.73
332 333 6.509418 TGACTTTGACCAAACCTTATATGC 57.491 37.500 0.00 0.00 0.00 3.14
333 334 7.029563 GCTTGACTTTGACCAAACCTTATATG 58.970 38.462 0.00 0.00 0.00 1.78
334 335 6.948309 AGCTTGACTTTGACCAAACCTTATAT 59.052 34.615 0.00 0.00 0.00 0.86
335 336 6.303839 AGCTTGACTTTGACCAAACCTTATA 58.696 36.000 0.00 0.00 0.00 0.98
336 337 5.140454 AGCTTGACTTTGACCAAACCTTAT 58.860 37.500 0.00 0.00 0.00 1.73
337 338 4.532834 AGCTTGACTTTGACCAAACCTTA 58.467 39.130 0.00 0.00 0.00 2.69
338 339 3.365472 AGCTTGACTTTGACCAAACCTT 58.635 40.909 0.00 0.00 0.00 3.50
339 340 3.018423 AGCTTGACTTTGACCAAACCT 57.982 42.857 0.00 0.00 0.00 3.50
340 341 3.801114 AAGCTTGACTTTGACCAAACC 57.199 42.857 0.00 0.00 33.71 3.27
350 351 6.116126 AGTCAAACTCTACAAAGCTTGACTT 58.884 36.000 13.94 3.16 41.70 3.01
351 352 5.675538 AGTCAAACTCTACAAAGCTTGACT 58.324 37.500 13.94 13.94 0.00 3.41
352 353 5.993106 AGTCAAACTCTACAAAGCTTGAC 57.007 39.130 0.00 10.63 0.00 3.18
353 354 7.272978 AGTTAGTCAAACTCTACAAAGCTTGA 58.727 34.615 0.00 0.00 45.64 3.02
354 355 7.484035 AGTTAGTCAAACTCTACAAAGCTTG 57.516 36.000 0.00 0.00 45.64 4.01
408 409 9.304335 TGGTGCATCTGATAATATTGATTTCAT 57.696 29.630 0.00 0.00 0.00 2.57
409 410 8.694581 TGGTGCATCTGATAATATTGATTTCA 57.305 30.769 0.00 0.00 0.00 2.69
410 411 9.569167 CATGGTGCATCTGATAATATTGATTTC 57.431 33.333 0.00 0.00 0.00 2.17
411 412 9.304335 TCATGGTGCATCTGATAATATTGATTT 57.696 29.630 0.00 0.00 0.00 2.17
412 413 8.873186 TCATGGTGCATCTGATAATATTGATT 57.127 30.769 0.00 0.00 0.00 2.57
413 414 8.873186 TTCATGGTGCATCTGATAATATTGAT 57.127 30.769 0.00 0.00 0.00 2.57
414 415 8.570488 GTTTCATGGTGCATCTGATAATATTGA 58.430 33.333 0.00 0.00 0.00 2.57
415 416 7.536281 CGTTTCATGGTGCATCTGATAATATTG 59.464 37.037 0.00 0.00 0.00 1.90
416 417 7.229306 ACGTTTCATGGTGCATCTGATAATATT 59.771 33.333 0.00 0.00 0.00 1.28
417 418 6.712095 ACGTTTCATGGTGCATCTGATAATAT 59.288 34.615 0.00 0.00 0.00 1.28
418 419 6.054941 ACGTTTCATGGTGCATCTGATAATA 58.945 36.000 0.00 0.00 0.00 0.98
419 420 4.883585 ACGTTTCATGGTGCATCTGATAAT 59.116 37.500 0.00 0.00 0.00 1.28
420 421 4.260985 ACGTTTCATGGTGCATCTGATAA 58.739 39.130 0.00 0.00 0.00 1.75
421 422 3.872696 ACGTTTCATGGTGCATCTGATA 58.127 40.909 0.00 0.00 0.00 2.15
422 423 2.715046 ACGTTTCATGGTGCATCTGAT 58.285 42.857 0.00 0.00 0.00 2.90
423 424 2.183478 ACGTTTCATGGTGCATCTGA 57.817 45.000 0.00 0.00 0.00 3.27
424 425 4.621068 AATACGTTTCATGGTGCATCTG 57.379 40.909 0.00 0.00 0.00 2.90
425 426 5.640732 GAAAATACGTTTCATGGTGCATCT 58.359 37.500 0.00 0.00 44.42 2.90
426 427 5.932021 GAAAATACGTTTCATGGTGCATC 57.068 39.130 0.00 0.00 44.42 3.91
501 502 9.134734 GTCAAAGTCAAACTACACAAAATTTGA 57.865 29.630 13.19 0.00 38.42 2.69
502 503 8.379902 GGTCAAAGTCAAACTACACAAAATTTG 58.620 33.333 3.89 3.89 34.11 2.32
503 504 8.091449 TGGTCAAAGTCAAACTACACAAAATTT 58.909 29.630 0.00 0.00 0.00 1.82
504 505 7.607250 TGGTCAAAGTCAAACTACACAAAATT 58.393 30.769 0.00 0.00 0.00 1.82
505 506 7.164230 TGGTCAAAGTCAAACTACACAAAAT 57.836 32.000 0.00 0.00 0.00 1.82
506 507 6.576662 TGGTCAAAGTCAAACTACACAAAA 57.423 33.333 0.00 0.00 0.00 2.44
507 508 6.576662 TTGGTCAAAGTCAAACTACACAAA 57.423 33.333 0.00 0.00 0.00 2.83
508 509 6.576662 TTTGGTCAAAGTCAAACTACACAA 57.423 33.333 0.00 0.00 0.00 3.33
509 510 6.767524 ATTTGGTCAAAGTCAAACTACACA 57.232 33.333 2.55 0.00 35.97 3.72
510 511 8.474006 AAAATTTGGTCAAAGTCAAACTACAC 57.526 30.769 0.00 0.00 35.97 2.90
516 517 8.920665 CGCATATAAAATTTGGTCAAAGTCAAA 58.079 29.630 0.00 0.00 37.29 2.69
517 518 7.543868 CCGCATATAAAATTTGGTCAAAGTCAA 59.456 33.333 0.00 0.00 33.32 3.18
518 519 7.032580 CCGCATATAAAATTTGGTCAAAGTCA 58.967 34.615 0.00 0.00 33.32 3.41
519 520 7.254852 TCCGCATATAAAATTTGGTCAAAGTC 58.745 34.615 0.00 0.00 33.32 3.01
520 521 7.093945 ACTCCGCATATAAAATTTGGTCAAAGT 60.094 33.333 0.00 0.00 33.32 2.66
521 522 7.257722 ACTCCGCATATAAAATTTGGTCAAAG 58.742 34.615 0.00 0.00 33.32 2.77
522 523 7.164230 ACTCCGCATATAAAATTTGGTCAAA 57.836 32.000 0.00 0.00 34.46 2.69
523 524 6.767524 ACTCCGCATATAAAATTTGGTCAA 57.232 33.333 0.00 0.00 0.00 3.18
524 525 7.867305 TTACTCCGCATATAAAATTTGGTCA 57.133 32.000 0.00 0.00 0.00 4.02
525 526 9.233232 CTTTTACTCCGCATATAAAATTTGGTC 57.767 33.333 0.00 0.00 29.82 4.02
526 527 8.962679 TCTTTTACTCCGCATATAAAATTTGGT 58.037 29.630 0.00 0.00 29.82 3.67
527 528 9.450807 CTCTTTTACTCCGCATATAAAATTTGG 57.549 33.333 0.00 0.00 29.82 3.28
532 533 9.880157 AAGTACTCTTTTACTCCGCATATAAAA 57.120 29.630 0.00 0.00 30.65 1.52
533 534 9.309516 CAAGTACTCTTTTACTCCGCATATAAA 57.690 33.333 0.00 0.00 30.65 1.40
534 535 7.924412 CCAAGTACTCTTTTACTCCGCATATAA 59.076 37.037 0.00 0.00 30.65 0.98
535 536 7.286087 TCCAAGTACTCTTTTACTCCGCATATA 59.714 37.037 0.00 0.00 30.65 0.86
536 537 6.097839 TCCAAGTACTCTTTTACTCCGCATAT 59.902 38.462 0.00 0.00 30.65 1.78
537 538 5.419788 TCCAAGTACTCTTTTACTCCGCATA 59.580 40.000 0.00 0.00 30.65 3.14
538 539 4.222145 TCCAAGTACTCTTTTACTCCGCAT 59.778 41.667 0.00 0.00 30.65 4.73
539 540 3.575256 TCCAAGTACTCTTTTACTCCGCA 59.425 43.478 0.00 0.00 30.65 5.69
540 541 4.184079 TCCAAGTACTCTTTTACTCCGC 57.816 45.455 0.00 0.00 30.65 5.54
541 542 5.780984 AGTTCCAAGTACTCTTTTACTCCG 58.219 41.667 0.00 0.00 30.65 4.63
542 543 6.427242 CCAAGTTCCAAGTACTCTTTTACTCC 59.573 42.308 0.00 0.00 30.65 3.85
543 544 7.171167 GTCCAAGTTCCAAGTACTCTTTTACTC 59.829 40.741 0.00 0.00 30.65 2.59
544 545 6.990939 GTCCAAGTTCCAAGTACTCTTTTACT 59.009 38.462 0.00 0.00 33.48 2.24
545 546 6.073927 CGTCCAAGTTCCAAGTACTCTTTTAC 60.074 42.308 0.00 0.00 0.00 2.01
546 547 5.987347 CGTCCAAGTTCCAAGTACTCTTTTA 59.013 40.000 0.00 0.00 0.00 1.52
547 548 4.814771 CGTCCAAGTTCCAAGTACTCTTTT 59.185 41.667 0.00 0.00 0.00 2.27
548 549 4.100498 TCGTCCAAGTTCCAAGTACTCTTT 59.900 41.667 0.00 0.00 0.00 2.52
549 550 3.640029 TCGTCCAAGTTCCAAGTACTCTT 59.360 43.478 0.00 0.00 0.00 2.85
550 551 3.228453 TCGTCCAAGTTCCAAGTACTCT 58.772 45.455 0.00 0.00 0.00 3.24
551 552 3.655276 TCGTCCAAGTTCCAAGTACTC 57.345 47.619 0.00 0.00 0.00 2.59
552 553 4.411256 TTTCGTCCAAGTTCCAAGTACT 57.589 40.909 0.00 0.00 0.00 2.73
553 554 4.995487 AGATTTCGTCCAAGTTCCAAGTAC 59.005 41.667 0.00 0.00 0.00 2.73
554 555 5.223449 AGATTTCGTCCAAGTTCCAAGTA 57.777 39.130 0.00 0.00 0.00 2.24
555 556 4.086706 AGATTTCGTCCAAGTTCCAAGT 57.913 40.909 0.00 0.00 0.00 3.16
556 557 5.390991 GCTAAGATTTCGTCCAAGTTCCAAG 60.391 44.000 0.00 0.00 0.00 3.61
557 558 4.454504 GCTAAGATTTCGTCCAAGTTCCAA 59.545 41.667 0.00 0.00 0.00 3.53
558 559 4.000988 GCTAAGATTTCGTCCAAGTTCCA 58.999 43.478 0.00 0.00 0.00 3.53
559 560 3.062234 CGCTAAGATTTCGTCCAAGTTCC 59.938 47.826 0.00 0.00 0.00 3.62
560 561 3.483738 GCGCTAAGATTTCGTCCAAGTTC 60.484 47.826 0.00 0.00 0.00 3.01
561 562 2.415512 GCGCTAAGATTTCGTCCAAGTT 59.584 45.455 0.00 0.00 0.00 2.66
562 563 2.000447 GCGCTAAGATTTCGTCCAAGT 59.000 47.619 0.00 0.00 0.00 3.16
563 564 2.271800 AGCGCTAAGATTTCGTCCAAG 58.728 47.619 8.99 0.00 0.00 3.61
564 565 2.380084 AGCGCTAAGATTTCGTCCAA 57.620 45.000 8.99 0.00 0.00 3.53
565 566 3.184541 GTTAGCGCTAAGATTTCGTCCA 58.815 45.455 29.42 1.14 0.00 4.02
566 567 2.215812 CGTTAGCGCTAAGATTTCGTCC 59.784 50.000 29.42 13.44 0.00 4.79
567 568 3.103738 TCGTTAGCGCTAAGATTTCGTC 58.896 45.455 29.42 14.13 38.14 4.20
568 569 3.106672 CTCGTTAGCGCTAAGATTTCGT 58.893 45.455 29.42 0.00 38.14 3.85
569 570 3.106672 ACTCGTTAGCGCTAAGATTTCG 58.893 45.455 29.42 25.93 38.14 3.46
570 571 4.352887 AGACTCGTTAGCGCTAAGATTTC 58.647 43.478 29.42 21.34 38.14 2.17
571 572 4.373348 AGACTCGTTAGCGCTAAGATTT 57.627 40.909 29.42 14.64 38.14 2.17
572 573 4.106197 CAAGACTCGTTAGCGCTAAGATT 58.894 43.478 29.42 20.49 38.14 2.40
573 574 3.696898 CAAGACTCGTTAGCGCTAAGAT 58.303 45.455 29.42 15.06 38.14 2.40
574 575 2.731341 GCAAGACTCGTTAGCGCTAAGA 60.731 50.000 29.42 24.05 38.14 2.10
575 576 1.584308 GCAAGACTCGTTAGCGCTAAG 59.416 52.381 29.42 20.17 38.14 2.18
576 577 1.068125 TGCAAGACTCGTTAGCGCTAA 60.068 47.619 25.53 25.53 38.14 3.09
577 578 0.524414 TGCAAGACTCGTTAGCGCTA 59.476 50.000 14.45 14.45 38.14 4.26
578 579 0.108615 ATGCAAGACTCGTTAGCGCT 60.109 50.000 17.26 17.26 38.14 5.92
579 580 0.721718 AATGCAAGACTCGTTAGCGC 59.278 50.000 0.00 0.00 38.14 5.92
580 581 1.527793 GCAATGCAAGACTCGTTAGCG 60.528 52.381 0.00 0.00 39.92 4.26
581 582 1.527793 CGCAATGCAAGACTCGTTAGC 60.528 52.381 5.91 0.00 0.00 3.09
582 583 1.726791 ACGCAATGCAAGACTCGTTAG 59.273 47.619 5.91 0.00 0.00 2.34
583 584 1.459209 CACGCAATGCAAGACTCGTTA 59.541 47.619 5.91 0.00 0.00 3.18
584 585 0.235665 CACGCAATGCAAGACTCGTT 59.764 50.000 5.91 0.00 0.00 3.85
585 586 1.862123 CACGCAATGCAAGACTCGT 59.138 52.632 5.91 0.00 0.00 4.18
586 587 4.731667 CACGCAATGCAAGACTCG 57.268 55.556 5.91 0.00 0.00 4.18
595 596 0.318120 AAGGGGAAAAGCACGCAATG 59.682 50.000 0.00 0.00 0.00 2.82
596 597 0.318120 CAAGGGGAAAAGCACGCAAT 59.682 50.000 0.00 0.00 0.00 3.56
597 598 1.739049 CAAGGGGAAAAGCACGCAA 59.261 52.632 0.00 0.00 0.00 4.85
598 599 2.199652 CCAAGGGGAAAAGCACGCA 61.200 57.895 0.00 0.00 35.59 5.24
599 600 1.744320 AACCAAGGGGAAAAGCACGC 61.744 55.000 0.00 0.00 38.05 5.34
600 601 0.750249 AAACCAAGGGGAAAAGCACG 59.250 50.000 0.00 0.00 38.05 5.34
601 602 1.810031 GCAAACCAAGGGGAAAAGCAC 60.810 52.381 0.00 0.00 38.05 4.40
602 603 0.467804 GCAAACCAAGGGGAAAAGCA 59.532 50.000 0.00 0.00 38.05 3.91
603 604 0.758734 AGCAAACCAAGGGGAAAAGC 59.241 50.000 0.00 0.00 38.05 3.51
604 605 3.230976 ACTAGCAAACCAAGGGGAAAAG 58.769 45.455 0.00 0.00 38.05 2.27
605 606 3.227614 GACTAGCAAACCAAGGGGAAAA 58.772 45.455 0.00 0.00 38.05 2.29
606 607 2.812613 CGACTAGCAAACCAAGGGGAAA 60.813 50.000 0.00 0.00 38.05 3.13
607 608 1.271163 CGACTAGCAAACCAAGGGGAA 60.271 52.381 0.00 0.00 38.05 3.97
608 609 0.323629 CGACTAGCAAACCAAGGGGA 59.676 55.000 0.00 0.00 38.05 4.81
609 610 0.676782 CCGACTAGCAAACCAAGGGG 60.677 60.000 0.00 0.00 41.29 4.79
610 611 1.305930 GCCGACTAGCAAACCAAGGG 61.306 60.000 0.00 0.00 0.00 3.95
611 612 0.321653 AGCCGACTAGCAAACCAAGG 60.322 55.000 0.00 0.00 34.23 3.61
612 613 1.523758 AAGCCGACTAGCAAACCAAG 58.476 50.000 0.00 0.00 34.23 3.61
613 614 2.038033 AGTAAGCCGACTAGCAAACCAA 59.962 45.455 0.00 0.00 34.23 3.67
614 615 1.621814 AGTAAGCCGACTAGCAAACCA 59.378 47.619 0.00 0.00 34.23 3.67
615 616 2.094130 AGAGTAAGCCGACTAGCAAACC 60.094 50.000 0.00 0.00 34.23 3.27
616 617 3.233684 AGAGTAAGCCGACTAGCAAAC 57.766 47.619 0.00 0.00 34.23 2.93
617 618 3.955650 AAGAGTAAGCCGACTAGCAAA 57.044 42.857 0.00 0.00 34.23 3.68
618 619 3.129988 GGTAAGAGTAAGCCGACTAGCAA 59.870 47.826 0.00 0.00 34.23 3.91
619 620 2.686915 GGTAAGAGTAAGCCGACTAGCA 59.313 50.000 0.00 0.00 34.23 3.49
620 621 2.686915 TGGTAAGAGTAAGCCGACTAGC 59.313 50.000 0.00 0.00 0.00 3.42
621 622 4.398673 ACTTGGTAAGAGTAAGCCGACTAG 59.601 45.833 0.00 0.00 0.00 2.57
622 623 4.338879 ACTTGGTAAGAGTAAGCCGACTA 58.661 43.478 0.00 0.00 0.00 2.59
623 624 3.163467 ACTTGGTAAGAGTAAGCCGACT 58.837 45.455 0.00 0.00 0.00 4.18
624 625 3.057033 TGACTTGGTAAGAGTAAGCCGAC 60.057 47.826 0.00 0.00 0.00 4.79
625 626 3.159472 TGACTTGGTAAGAGTAAGCCGA 58.841 45.455 0.00 0.00 0.00 5.54
626 627 3.587797 TGACTTGGTAAGAGTAAGCCG 57.412 47.619 0.00 0.00 0.00 5.52
627 628 6.819397 ATTTTGACTTGGTAAGAGTAAGCC 57.181 37.500 0.00 0.00 0.00 4.35
638 639 9.965824 CAAGTGTAGAATTAATTTTGACTTGGT 57.034 29.630 22.42 4.79 35.98 3.67
639 640 9.410556 CCAAGTGTAGAATTAATTTTGACTTGG 57.589 33.333 27.95 27.95 46.80 3.61
651 652 9.958180 TCAAGATTTCATCCAAGTGTAGAATTA 57.042 29.630 0.00 0.00 0.00 1.40
652 653 8.734386 GTCAAGATTTCATCCAAGTGTAGAATT 58.266 33.333 0.00 0.00 0.00 2.17
653 654 7.065085 CGTCAAGATTTCATCCAAGTGTAGAAT 59.935 37.037 0.00 0.00 0.00 2.40
654 655 6.368791 CGTCAAGATTTCATCCAAGTGTAGAA 59.631 38.462 0.00 0.00 0.00 2.10
655 656 5.869344 CGTCAAGATTTCATCCAAGTGTAGA 59.131 40.000 0.00 0.00 0.00 2.59
656 657 5.446473 GCGTCAAGATTTCATCCAAGTGTAG 60.446 44.000 0.00 0.00 0.00 2.74
657 658 4.391830 GCGTCAAGATTTCATCCAAGTGTA 59.608 41.667 0.00 0.00 0.00 2.90
658 659 3.189287 GCGTCAAGATTTCATCCAAGTGT 59.811 43.478 0.00 0.00 0.00 3.55
659 660 3.725895 CGCGTCAAGATTTCATCCAAGTG 60.726 47.826 0.00 0.00 0.00 3.16
660 661 2.416547 CGCGTCAAGATTTCATCCAAGT 59.583 45.455 0.00 0.00 0.00 3.16
661 662 2.416547 ACGCGTCAAGATTTCATCCAAG 59.583 45.455 5.58 0.00 0.00 3.61
662 663 2.422597 ACGCGTCAAGATTTCATCCAA 58.577 42.857 5.58 0.00 0.00 3.53
739 740 1.691337 TCCTGGGATTACGGGGGTG 60.691 63.158 0.00 0.00 37.50 4.61
996 1014 0.671781 GGTGAGCTGCGAGTTGTGAT 60.672 55.000 0.00 0.00 0.00 3.06
1019 1048 0.811915 TGCTTAGCAGAGGAGACGAC 59.188 55.000 1.39 0.00 33.32 4.34
1053 1099 3.141488 CGGAGAGGAGACGGTGGG 61.141 72.222 0.00 0.00 0.00 4.61
1054 1100 1.038130 ATTCGGAGAGGAGACGGTGG 61.038 60.000 0.00 0.00 38.43 4.61
1055 1101 0.382515 GATTCGGAGAGGAGACGGTG 59.617 60.000 0.00 0.00 38.43 4.94
1056 1102 0.256464 AGATTCGGAGAGGAGACGGT 59.744 55.000 0.00 0.00 38.43 4.83
1057 1103 1.335496 GAAGATTCGGAGAGGAGACGG 59.665 57.143 0.00 0.00 38.43 4.79
1058 1104 2.289547 GAGAAGATTCGGAGAGGAGACG 59.710 54.545 0.00 0.00 38.43 4.18
1059 1105 2.621526 GGAGAAGATTCGGAGAGGAGAC 59.378 54.545 0.00 0.00 38.43 3.36
1531 1610 6.592994 GTGTAATATTTCCTCCGCCTATAACC 59.407 42.308 0.00 0.00 0.00 2.85
1539 1625 3.244579 GTCGTGTGTAATATTTCCTCCGC 59.755 47.826 0.00 0.00 0.00 5.54
1549 1635 4.177783 ACATCGCAATGTCGTGTGTAATA 58.822 39.130 0.00 0.00 42.59 0.98
1620 1712 9.442047 CATCCACCAGAGGAGAATATAAATAAC 57.558 37.037 0.00 0.00 41.90 1.89
1622 1714 8.597167 CACATCCACCAGAGGAGAATATAAATA 58.403 37.037 0.00 0.00 41.90 1.40
1623 1715 7.072961 ACACATCCACCAGAGGAGAATATAAAT 59.927 37.037 0.00 0.00 41.90 1.40
1692 1809 6.127869 TGCTAGAACAGAGTAGCTTGTAAGAG 60.128 42.308 0.00 0.00 41.94 2.85
1745 1879 9.823647 TGATAGAATTCTGATAGGAAGTGTTTC 57.176 33.333 18.47 0.00 0.00 2.78
1747 1881 9.775854 CATGATAGAATTCTGATAGGAAGTGTT 57.224 33.333 18.47 0.00 0.00 3.32
1748 1882 8.932610 ACATGATAGAATTCTGATAGGAAGTGT 58.067 33.333 18.47 7.45 0.00 3.55
1752 1886 9.372189 TCTCACATGATAGAATTCTGATAGGAA 57.628 33.333 18.47 0.00 0.00 3.36
1753 1887 8.946797 TCTCACATGATAGAATTCTGATAGGA 57.053 34.615 18.47 6.15 0.00 2.94
1754 1888 9.642327 CTTCTCACATGATAGAATTCTGATAGG 57.358 37.037 18.47 7.81 31.60 2.57
1757 1891 9.545105 GAACTTCTCACATGATAGAATTCTGAT 57.455 33.333 18.47 7.56 31.60 2.90
1760 1894 9.956640 AAAGAACTTCTCACATGATAGAATTCT 57.043 29.630 13.56 13.56 34.60 2.40
1764 1898 9.342308 ACAAAAAGAACTTCTCACATGATAGAA 57.658 29.630 0.00 7.00 0.00 2.10
1765 1899 8.777413 CACAAAAAGAACTTCTCACATGATAGA 58.223 33.333 0.00 0.00 0.00 1.98
1777 2007 3.843999 TGCCACACACAAAAAGAACTTC 58.156 40.909 0.00 0.00 0.00 3.01
1783 2013 3.370672 GGTTCTTTGCCACACACAAAAAG 59.629 43.478 0.00 0.00 36.63 2.27
1841 2084 0.109272 TGTAGTTCAGCTCTTCGGCG 60.109 55.000 0.00 0.00 37.29 6.46
1888 2132 7.916914 ATAAAAAGTTAGTGCCACGAGTAAT 57.083 32.000 0.00 0.00 0.00 1.89
1977 2221 9.278734 CGGCTCTCTTGTAATTTTTATTTTCTC 57.721 33.333 0.00 0.00 0.00 2.87
1981 2225 6.627287 GCCCGGCTCTCTTGTAATTTTTATTT 60.627 38.462 0.71 0.00 0.00 1.40
1996 2240 1.751437 ATAAGTTTTGCCCGGCTCTC 58.249 50.000 11.61 0.00 0.00 3.20
1997 2241 1.818674 CAATAAGTTTTGCCCGGCTCT 59.181 47.619 11.61 1.30 0.00 4.09
2003 2328 6.653740 ACTGTCTAGTACAATAAGTTTTGCCC 59.346 38.462 0.00 0.00 37.74 5.36
2005 2330 8.535690 AGACTGTCTAGTACAATAAGTTTTGC 57.464 34.615 8.91 0.00 37.74 3.68
2047 2372 2.325082 CGCTGGTCTTTTGGGGACG 61.325 63.158 0.00 0.00 34.82 4.79
2049 2374 2.282180 GCGCTGGTCTTTTGGGGA 60.282 61.111 0.00 0.00 0.00 4.81
2053 2378 1.165907 TCTGGTGCGCTGGTCTTTTG 61.166 55.000 9.73 0.00 0.00 2.44
2057 2382 4.008933 GGTCTGGTGCGCTGGTCT 62.009 66.667 9.73 0.00 0.00 3.85
2058 2383 3.825160 TTGGTCTGGTGCGCTGGTC 62.825 63.158 9.73 0.00 0.00 4.02
2061 2386 2.186160 TTGTTGGTCTGGTGCGCTG 61.186 57.895 9.73 0.00 0.00 5.18
2064 2389 1.172180 ATGGTTGTTGGTCTGGTGCG 61.172 55.000 0.00 0.00 0.00 5.34
2073 2398 1.452110 TCATCAGCGATGGTTGTTGG 58.548 50.000 15.33 0.00 40.15 3.77
2076 2401 2.027745 ACTCTTCATCAGCGATGGTTGT 60.028 45.455 15.33 8.85 40.15 3.32
2077 2402 2.625737 ACTCTTCATCAGCGATGGTTG 58.374 47.619 15.33 0.00 40.15 3.77
2114 2441 7.792925 TCTTCATTCGTGTAGTTACATGTTTG 58.207 34.615 2.30 9.42 42.38 2.93
2118 2445 7.755582 TCATCTTCATTCGTGTAGTTACATG 57.244 36.000 5.35 5.35 42.96 3.21
2119 2446 7.277981 GGTTCATCTTCATTCGTGTAGTTACAT 59.722 37.037 0.00 0.00 38.63 2.29
2126 2453 6.093495 GGATTTGGTTCATCTTCATTCGTGTA 59.907 38.462 0.00 0.00 0.00 2.90
2134 2461 8.827832 ATCTATTTGGATTTGGTTCATCTTCA 57.172 30.769 0.00 0.00 0.00 3.02
2140 2467 5.656416 GGTGGATCTATTTGGATTTGGTTCA 59.344 40.000 0.00 0.00 0.00 3.18
2145 2472 6.543430 TTTGGGTGGATCTATTTGGATTTG 57.457 37.500 0.00 0.00 0.00 2.32
2147 2474 5.425217 GGTTTTGGGTGGATCTATTTGGATT 59.575 40.000 0.00 0.00 0.00 3.01
2165 2492 1.021202 TTCGGTCAGTGCTGGTTTTG 58.979 50.000 0.00 0.00 0.00 2.44
2177 2504 0.744874 GATCTCACGGGATTCGGTCA 59.255 55.000 0.00 0.00 44.45 4.02
2178 2505 1.033574 AGATCTCACGGGATTCGGTC 58.966 55.000 0.00 0.00 44.45 4.79
2181 2508 1.598183 CGTCAGATCTCACGGGATTCG 60.598 57.143 11.78 0.00 45.88 3.34
2190 2517 2.229062 GGTGTGTCTTCGTCAGATCTCA 59.771 50.000 0.00 0.00 32.60 3.27
2193 2520 2.416162 GGAGGTGTGTCTTCGTCAGATC 60.416 54.545 0.00 0.00 32.60 2.75
2197 2524 0.387929 GTGGAGGTGTGTCTTCGTCA 59.612 55.000 0.00 0.00 0.00 4.35
2200 2527 3.448686 GATATGTGGAGGTGTGTCTTCG 58.551 50.000 0.00 0.00 0.00 3.79
2202 2529 3.454858 AGGATATGTGGAGGTGTGTCTT 58.545 45.455 0.00 0.00 0.00 3.01
2216 2543 4.416620 GAATAGCGTCGGAGAAGGATATG 58.583 47.826 0.00 0.00 39.69 1.78
2222 2549 2.496718 GCGAATAGCGTCGGAGAAG 58.503 57.895 9.09 0.00 43.41 2.85
2245 2572 0.033796 ACGTCCTATCCTTGTCCCGA 60.034 55.000 0.00 0.00 0.00 5.14
2250 2577 2.379972 CCTCTCACGTCCTATCCTTGT 58.620 52.381 0.00 0.00 0.00 3.16
2251 2578 1.067821 GCCTCTCACGTCCTATCCTTG 59.932 57.143 0.00 0.00 0.00 3.61
2252 2579 1.342076 TGCCTCTCACGTCCTATCCTT 60.342 52.381 0.00 0.00 0.00 3.36
2253 2580 0.259065 TGCCTCTCACGTCCTATCCT 59.741 55.000 0.00 0.00 0.00 3.24
2259 2587 3.798202 AGAAATAATGCCTCTCACGTCC 58.202 45.455 0.00 0.00 0.00 4.79
2266 2594 4.649674 TCCGTCAGTAGAAATAATGCCTCT 59.350 41.667 0.00 0.00 0.00 3.69
2270 2598 6.237595 GCGATATCCGTCAGTAGAAATAATGC 60.238 42.308 0.00 0.00 41.15 3.56
2286 2614 4.293648 TGGCGGTGGCGATATCCG 62.294 66.667 0.00 0.00 45.94 4.18
2287 2615 1.812686 TAGTGGCGGTGGCGATATCC 61.813 60.000 0.00 0.00 41.24 2.59
2288 2616 0.032952 TTAGTGGCGGTGGCGATATC 59.967 55.000 0.00 0.00 41.24 1.63
2289 2617 0.249741 GTTAGTGGCGGTGGCGATAT 60.250 55.000 0.00 0.00 41.24 1.63
2290 2618 1.142314 GTTAGTGGCGGTGGCGATA 59.858 57.895 0.00 0.00 41.24 2.92
2291 2619 2.125269 GTTAGTGGCGGTGGCGAT 60.125 61.111 0.00 0.00 41.24 4.58
2292 2620 2.386064 AAAGTTAGTGGCGGTGGCGA 62.386 55.000 0.00 0.00 41.24 5.54
2293 2621 1.512156 AAAAGTTAGTGGCGGTGGCG 61.512 55.000 0.00 0.00 41.24 5.69
2299 2627 6.996106 TCATCGTTATAAAAAGTTAGTGGCG 58.004 36.000 0.00 0.00 0.00 5.69
2327 2655 2.170607 TCTTTCCTTCTGATAAGCGGGG 59.829 50.000 0.00 0.00 0.00 5.73
2357 2685 8.631695 CGTAGATTGCGCAAAACTAAAATTTTA 58.368 29.630 28.81 10.16 30.57 1.52
2370 2723 5.751509 AGAATATACAACGTAGATTGCGCAA 59.248 36.000 27.24 27.24 32.47 4.85
2394 2747 0.394488 TTCTGCAACGTTCCCCAACA 60.394 50.000 0.00 0.00 32.14 3.33
2395 2748 0.741915 TTTCTGCAACGTTCCCCAAC 59.258 50.000 0.00 0.00 0.00 3.77
2396 2749 1.135333 GTTTTCTGCAACGTTCCCCAA 59.865 47.619 0.00 0.00 0.00 4.12
2397 2750 0.741915 GTTTTCTGCAACGTTCCCCA 59.258 50.000 0.00 0.00 0.00 4.96
2398 2751 0.741915 TGTTTTCTGCAACGTTCCCC 59.258 50.000 0.00 0.00 0.00 4.81
2399 2752 2.570442 TTGTTTTCTGCAACGTTCCC 57.430 45.000 0.00 0.00 0.00 3.97
2400 2753 4.912528 TTTTTGTTTTCTGCAACGTTCC 57.087 36.364 0.00 0.00 0.00 3.62
2425 3250 4.610605 TGATCTTGGTGAAACGTAGGAA 57.389 40.909 0.00 0.00 38.12 3.36
2426 3251 4.610605 TTGATCTTGGTGAAACGTAGGA 57.389 40.909 0.00 0.00 38.12 2.94
2431 3256 5.817296 TCCATAGATTGATCTTGGTGAAACG 59.183 40.000 15.48 0.00 36.53 3.60
2432 3257 6.825721 ACTCCATAGATTGATCTTGGTGAAAC 59.174 38.462 19.38 0.00 38.32 2.78
2438 3263 6.590068 AGTTGACTCCATAGATTGATCTTGG 58.410 40.000 0.00 7.19 38.32 3.61
2441 3266 6.552725 TGCTAGTTGACTCCATAGATTGATCT 59.447 38.462 0.00 0.00 40.86 2.75
2442 3267 6.753180 TGCTAGTTGACTCCATAGATTGATC 58.247 40.000 0.00 0.00 0.00 2.92
2443 3268 6.737720 TGCTAGTTGACTCCATAGATTGAT 57.262 37.500 0.00 0.00 0.00 2.57
2444 3269 6.544928 TTGCTAGTTGACTCCATAGATTGA 57.455 37.500 0.00 0.00 0.00 2.57
2445 3270 6.988580 TCATTGCTAGTTGACTCCATAGATTG 59.011 38.462 0.00 0.00 0.00 2.67
2446 3271 7.070447 TCTCATTGCTAGTTGACTCCATAGATT 59.930 37.037 0.00 0.00 0.00 2.40
2447 3272 6.552725 TCTCATTGCTAGTTGACTCCATAGAT 59.447 38.462 0.00 0.00 0.00 1.98
2448 3273 5.893824 TCTCATTGCTAGTTGACTCCATAGA 59.106 40.000 0.00 0.00 0.00 1.98
2449 3274 6.154203 TCTCATTGCTAGTTGACTCCATAG 57.846 41.667 0.00 0.00 0.00 2.23
2450 3275 5.069648 CCTCTCATTGCTAGTTGACTCCATA 59.930 44.000 0.00 0.00 0.00 2.74
2454 3279 4.400884 TCTCCTCTCATTGCTAGTTGACTC 59.599 45.833 0.00 0.00 0.00 3.36
2455 3280 4.348486 TCTCCTCTCATTGCTAGTTGACT 58.652 43.478 0.00 0.00 0.00 3.41
2456 3281 4.159506 ACTCTCCTCTCATTGCTAGTTGAC 59.840 45.833 0.00 0.00 0.00 3.18
2458 3283 4.431809 CACTCTCCTCTCATTGCTAGTTG 58.568 47.826 0.00 0.00 0.00 3.16
2459 3284 3.118811 GCACTCTCCTCTCATTGCTAGTT 60.119 47.826 0.00 0.00 0.00 2.24
2461 3286 2.429971 TGCACTCTCCTCTCATTGCTAG 59.570 50.000 0.00 0.00 0.00 3.42
2462 3287 2.460669 TGCACTCTCCTCTCATTGCTA 58.539 47.619 0.00 0.00 0.00 3.49
2464 3289 2.158928 AGATGCACTCTCCTCTCATTGC 60.159 50.000 0.00 0.00 0.00 3.56
2465 3290 3.823281 AGATGCACTCTCCTCTCATTG 57.177 47.619 0.00 0.00 0.00 2.82
2468 3293 3.372440 TGTAGATGCACTCTCCTCTCA 57.628 47.619 0.00 0.00 35.28 3.27
2469 3294 4.217550 GGTATGTAGATGCACTCTCCTCTC 59.782 50.000 0.00 0.00 35.28 3.20
2472 3297 3.116939 AGGGTATGTAGATGCACTCTCCT 60.117 47.826 0.00 0.00 35.28 3.69
2474 3299 4.100189 ACAAGGGTATGTAGATGCACTCTC 59.900 45.833 0.00 0.00 35.28 3.20
2476 3301 4.408182 ACAAGGGTATGTAGATGCACTC 57.592 45.455 0.00 0.00 25.83 3.51
2492 5378 1.658717 CCGCTCGCGATCTACAAGG 60.659 63.158 10.36 0.00 42.83 3.61
2493 5379 0.248498 TTCCGCTCGCGATCTACAAG 60.248 55.000 10.36 0.00 42.83 3.16
2494 5380 0.248498 CTTCCGCTCGCGATCTACAA 60.248 55.000 10.36 0.00 42.83 2.41
2505 5391 0.388649 TCTCTTGAACGCTTCCGCTC 60.389 55.000 0.00 0.00 38.22 5.03
2506 5392 0.033504 TTCTCTTGAACGCTTCCGCT 59.966 50.000 0.00 0.00 38.22 5.52
2507 5393 0.164002 GTTCTCTTGAACGCTTCCGC 59.836 55.000 0.00 0.00 42.39 5.54
2515 5401 2.762535 TCATCCCCGTTCTCTTGAAC 57.237 50.000 0.00 0.00 46.59 3.18
2518 5404 1.486310 TCCATCATCCCCGTTCTCTTG 59.514 52.381 0.00 0.00 0.00 3.02
2519 5405 1.765314 CTCCATCATCCCCGTTCTCTT 59.235 52.381 0.00 0.00 0.00 2.85
2522 5408 1.123928 GACTCCATCATCCCCGTTCT 58.876 55.000 0.00 0.00 0.00 3.01
2524 5410 0.976073 ACGACTCCATCATCCCCGTT 60.976 55.000 0.00 0.00 0.00 4.44
2526 5412 0.314302 GTACGACTCCATCATCCCCG 59.686 60.000 0.00 0.00 0.00 5.73
2527 5413 1.614413 GAGTACGACTCCATCATCCCC 59.386 57.143 0.00 0.00 39.28 4.81
2529 5415 1.335142 GCGAGTACGACTCCATCATCC 60.335 57.143 8.73 0.00 42.12 3.51
2530 5416 1.335142 GGCGAGTACGACTCCATCATC 60.335 57.143 8.73 0.00 45.04 2.92
2531 5417 0.669077 GGCGAGTACGACTCCATCAT 59.331 55.000 8.73 0.00 45.04 2.45
2533 5419 1.009900 CGGCGAGTACGACTCCATC 60.010 63.158 0.00 1.13 46.46 3.51
2534 5420 1.748122 ACGGCGAGTACGACTCCAT 60.748 57.895 16.62 0.00 46.46 3.41
2536 5422 1.712977 ATCACGGCGAGTACGACTCC 61.713 60.000 16.62 0.00 46.46 3.85
2537 5423 0.316032 GATCACGGCGAGTACGACTC 60.316 60.000 16.62 0.00 46.46 3.36
2538 5424 1.712977 GGATCACGGCGAGTACGACT 61.713 60.000 16.62 0.00 46.46 4.18
2539 5425 1.298190 GGATCACGGCGAGTACGAC 60.298 63.158 16.62 0.00 45.02 4.34
2541 5427 0.457166 TTTGGATCACGGCGAGTACG 60.457 55.000 16.62 0.00 42.93 3.67
2543 5429 1.478916 TGATTTGGATCACGGCGAGTA 59.521 47.619 16.62 0.00 37.37 2.59
2544 5430 0.249120 TGATTTGGATCACGGCGAGT 59.751 50.000 16.62 0.00 37.37 4.18
2545 5431 3.064079 TGATTTGGATCACGGCGAG 57.936 52.632 16.62 5.72 37.37 5.03
2554 5440 3.282021 CTTGGTCATCGGTGATTTGGAT 58.718 45.455 0.00 0.00 36.60 3.41
2566 6322 1.787847 CGTTCGGCACTTGGTCATC 59.212 57.895 0.00 0.00 0.00 2.92
2567 6323 3.966215 CGTTCGGCACTTGGTCAT 58.034 55.556 0.00 0.00 0.00 3.06


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.