Multiple sequence alignment - TraesCS4A01G404000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G404000 chr4A 100.000 4221 0 0 1 4221 677934067 677938287 0.000000e+00 7795.0
1 TraesCS4A01G404000 chr4A 84.084 333 36 4 1386 1702 699840785 699841116 5.300000e-79 305.0
2 TraesCS4A01G404000 chr4D 91.027 2151 95 29 523 2620 470111996 470114101 0.000000e+00 2813.0
3 TraesCS4A01G404000 chr4D 93.778 1109 46 8 2714 3812 470114090 470115185 0.000000e+00 1644.0
4 TraesCS4A01G404000 chr4D 90.964 166 9 4 3950 4111 470115214 470115377 7.110000e-53 219.0
5 TraesCS4A01G404000 chr4D 84.896 192 20 2 3245 3436 66003338 66003520 7.210000e-43 185.0
6 TraesCS4A01G404000 chr4D 90.909 77 1 1 4145 4221 470115370 470115440 9.660000e-17 99.0
7 TraesCS4A01G404000 chr4D 97.500 40 0 1 3821 3859 470115180 470115219 2.720000e-07 67.6
8 TraesCS4A01G404000 chr4B 87.746 1322 94 31 2747 4018 591499003 591500306 0.000000e+00 1482.0
9 TraesCS4A01G404000 chr4B 91.279 860 52 11 1044 1884 591497438 591498293 0.000000e+00 1151.0
10 TraesCS4A01G404000 chr4B 95.053 566 23 5 2037 2599 591498440 591499003 0.000000e+00 885.0
11 TraesCS4A01G404000 chr4B 82.961 358 22 19 473 801 591494897 591495244 1.920000e-73 287.0
12 TraesCS4A01G404000 chr4B 92.647 136 10 0 1917 2052 591498293 591498428 3.330000e-46 196.0
13 TraesCS4A01G404000 chr4B 85.629 167 14 2 2598 2754 178081264 178081098 2.610000e-37 167.0
14 TraesCS4A01G404000 chr4B 82.222 180 15 4 2598 2760 28618628 28618449 5.690000e-29 139.0
15 TraesCS4A01G404000 chr4B 81.651 109 4 5 844 952 591496970 591497062 4.530000e-10 76.8
16 TraesCS4A01G404000 chr2D 86.306 628 48 10 1094 1702 640949039 640948431 0.000000e+00 649.0
17 TraesCS4A01G404000 chr2D 87.952 166 11 1 2598 2754 336511134 336511299 2.000000e-43 187.0
18 TraesCS4A01G404000 chr1B 87.374 396 27 9 1098 1490 212225754 212226129 2.330000e-117 433.0
19 TraesCS4A01G404000 chr5B 81.797 434 61 15 6 432 576035247 576035669 8.690000e-92 348.0
20 TraesCS4A01G404000 chr5B 84.227 317 29 6 1404 1702 34585527 34585214 5.340000e-74 289.0
21 TraesCS4A01G404000 chr5D 81.818 374 59 7 63 432 469714659 469715027 5.300000e-79 305.0
22 TraesCS4A01G404000 chr5D 87.261 157 16 3 2599 2754 114900433 114900586 4.340000e-40 176.0
23 TraesCS4A01G404000 chr5D 86.061 165 14 1 2598 2753 59947843 59947679 7.260000e-38 169.0
24 TraesCS4A01G404000 chr2A 83.271 269 32 8 169 432 187949278 187949538 7.060000e-58 235.0
25 TraesCS4A01G404000 chr2A 87.195 164 9 3 2597 2750 696850878 696850717 4.340000e-40 176.0
26 TraesCS4A01G404000 chr2A 86.047 172 13 3 2595 2755 578387720 578387549 1.560000e-39 174.0
27 TraesCS4A01G404000 chr2A 84.242 165 12 5 2596 2750 656371874 656372034 9.460000e-32 148.0
28 TraesCS4A01G404000 chr6A 83.858 254 30 7 182 432 597331752 597331507 9.130000e-57 231.0
29 TraesCS4A01G404000 chr6A 82.900 269 33 8 169 432 73381366 73381106 3.280000e-56 230.0
30 TraesCS4A01G404000 chr7A 81.362 279 47 4 152 425 488733853 488733575 5.490000e-54 222.0
31 TraesCS4A01G404000 chr7A 87.179 117 6 1 2647 2754 209157014 209157130 1.590000e-24 124.0
32 TraesCS4A01G404000 chr5A 81.655 278 41 8 159 432 413229776 413229505 5.490000e-54 222.0
33 TraesCS4A01G404000 chr5A 84.848 165 15 2 2598 2753 48469201 48469038 1.570000e-34 158.0
34 TraesCS4A01G404000 chr3A 81.111 270 33 12 169 432 449657310 449657053 2.570000e-47 200.0
35 TraesCS4A01G404000 chr3D 81.200 250 36 6 182 427 182319009 182318767 1.550000e-44 191.0
36 TraesCS4A01G404000 chr7B 87.654 162 11 1 2598 2750 327430159 327429998 3.350000e-41 180.0
37 TraesCS4A01G404000 chr7B 96.875 64 2 0 1639 1702 18364310 18364247 1.600000e-19 108.0
38 TraesCS4A01G404000 chr6D 87.654 162 10 5 2598 2750 431160828 431160668 3.350000e-41 180.0
39 TraesCS4A01G404000 chr6D 86.310 168 13 2 2597 2755 145758814 145758648 1.560000e-39 174.0
40 TraesCS4A01G404000 chr6B 84.706 170 16 5 2591 2750 83138377 83138546 1.210000e-35 161.0
41 TraesCS4A01G404000 chr7D 84.118 170 17 2 2594 2754 199357183 199357351 5.650000e-34 156.0
42 TraesCS4A01G404000 chr1A 84.564 149 13 2 2598 2736 564757338 564757190 5.690000e-29 139.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G404000 chr4A 677934067 677938287 4220 False 7795.000000 7795 100.000000 1 4221 1 chr4A.!!$F1 4220
1 TraesCS4A01G404000 chr4D 470111996 470115440 3444 False 968.520000 2813 92.835600 523 4221 5 chr4D.!!$F2 3698
2 TraesCS4A01G404000 chr4B 591494897 591500306 5409 False 679.633333 1482 88.556167 473 4018 6 chr4B.!!$F1 3545
3 TraesCS4A01G404000 chr2D 640948431 640949039 608 True 649.000000 649 86.306000 1094 1702 1 chr2D.!!$R1 608

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
60 61 0.171007 CATGCGCAAATCGAAGGGTT 59.829 50.0 17.11 0.0 41.67 4.11 F
1514 3532 0.165727 CGTGCGTGCTATGCTTTTGA 59.834 50.0 0.00 0.0 0.00 2.69 F
1596 3626 0.538516 TTGGTGGGATTGTTGGACCG 60.539 55.0 0.00 0.0 0.00 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1528 3547 3.015327 GCAATTCATCCTGCTGAACTCT 58.985 45.455 0.0 0.0 37.93 3.24 R
3073 5156 0.304705 CTGCGTTTGTTCTGCTCGTT 59.695 50.000 0.0 0.0 0.00 3.85 R
3503 5607 1.198637 GTGCTGTGGAGTGCATCTTTC 59.801 52.381 0.0 0.0 41.45 2.62 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 8.066612 ACCAAGGTTTCATGGTCTTTTATATG 57.933 34.615 0.00 0.00 46.94 1.78
36 37 7.124147 ACCAAGGTTTCATGGTCTTTTATATGG 59.876 37.037 0.00 0.00 46.94 2.74
37 38 7.124147 CCAAGGTTTCATGGTCTTTTATATGGT 59.876 37.037 0.00 0.00 31.84 3.55
38 39 7.881775 AGGTTTCATGGTCTTTTATATGGTC 57.118 36.000 0.00 0.00 0.00 4.02
39 40 7.643123 AGGTTTCATGGTCTTTTATATGGTCT 58.357 34.615 0.00 0.00 0.00 3.85
40 41 8.778059 AGGTTTCATGGTCTTTTATATGGTCTA 58.222 33.333 0.00 0.00 0.00 2.59
41 42 8.837389 GGTTTCATGGTCTTTTATATGGTCTAC 58.163 37.037 0.00 0.00 0.00 2.59
42 43 9.391006 GTTTCATGGTCTTTTATATGGTCTACA 57.609 33.333 0.00 0.00 0.00 2.74
44 45 9.559732 TTCATGGTCTTTTATATGGTCTACATG 57.440 33.333 0.00 0.00 40.82 3.21
45 46 7.661437 TCATGGTCTTTTATATGGTCTACATGC 59.339 37.037 0.00 0.00 40.82 4.06
46 47 5.989168 TGGTCTTTTATATGGTCTACATGCG 59.011 40.000 0.00 0.00 40.82 4.73
47 48 5.107065 GGTCTTTTATATGGTCTACATGCGC 60.107 44.000 0.00 0.00 40.82 6.09
48 49 5.465390 GTCTTTTATATGGTCTACATGCGCA 59.535 40.000 14.96 14.96 40.82 6.09
49 50 6.018262 GTCTTTTATATGGTCTACATGCGCAA 60.018 38.462 17.11 0.00 40.82 4.85
50 51 6.540551 TCTTTTATATGGTCTACATGCGCAAA 59.459 34.615 17.11 1.52 40.82 3.68
51 52 6.875948 TTTATATGGTCTACATGCGCAAAT 57.124 33.333 17.11 8.31 40.82 2.32
52 53 6.480524 TTATATGGTCTACATGCGCAAATC 57.519 37.500 17.11 1.84 40.82 2.17
53 54 1.006086 TGGTCTACATGCGCAAATCG 58.994 50.000 17.11 6.01 42.12 3.34
54 55 1.286501 GGTCTACATGCGCAAATCGA 58.713 50.000 17.11 6.44 41.67 3.59
55 56 1.663643 GGTCTACATGCGCAAATCGAA 59.336 47.619 17.11 0.00 41.67 3.71
56 57 2.285834 GGTCTACATGCGCAAATCGAAG 60.286 50.000 17.11 6.70 41.67 3.79
57 58 1.933181 TCTACATGCGCAAATCGAAGG 59.067 47.619 17.11 0.00 41.67 3.46
58 59 1.003545 CTACATGCGCAAATCGAAGGG 60.004 52.381 17.11 0.00 41.67 3.95
59 60 0.960364 ACATGCGCAAATCGAAGGGT 60.960 50.000 17.11 0.00 41.67 4.34
60 61 0.171007 CATGCGCAAATCGAAGGGTT 59.829 50.000 17.11 0.00 41.67 4.11
61 62 0.887933 ATGCGCAAATCGAAGGGTTT 59.112 45.000 17.11 0.00 41.67 3.27
62 63 1.524848 TGCGCAAATCGAAGGGTTTA 58.475 45.000 8.16 0.00 41.67 2.01
63 64 1.880675 TGCGCAAATCGAAGGGTTTAA 59.119 42.857 8.16 0.00 41.67 1.52
64 65 2.095466 TGCGCAAATCGAAGGGTTTAAG 60.095 45.455 8.16 0.00 41.67 1.85
65 66 2.160813 GCGCAAATCGAAGGGTTTAAGA 59.839 45.455 0.30 0.00 41.67 2.10
66 67 3.365565 GCGCAAATCGAAGGGTTTAAGAA 60.366 43.478 0.30 0.00 41.67 2.52
67 68 4.674362 GCGCAAATCGAAGGGTTTAAGAAT 60.674 41.667 0.30 0.00 41.67 2.40
68 69 5.448089 GCGCAAATCGAAGGGTTTAAGAATA 60.448 40.000 0.30 0.00 41.67 1.75
69 70 6.548171 CGCAAATCGAAGGGTTTAAGAATAA 58.452 36.000 0.00 0.00 41.67 1.40
70 71 7.024768 CGCAAATCGAAGGGTTTAAGAATAAA 58.975 34.615 0.00 0.00 41.67 1.40
71 72 7.700656 CGCAAATCGAAGGGTTTAAGAATAAAT 59.299 33.333 0.00 0.00 41.67 1.40
72 73 8.807581 GCAAATCGAAGGGTTTAAGAATAAATG 58.192 33.333 0.00 0.00 33.76 2.32
73 74 8.807581 CAAATCGAAGGGTTTAAGAATAAATGC 58.192 33.333 0.00 0.00 33.76 3.56
74 75 7.639113 ATCGAAGGGTTTAAGAATAAATGCA 57.361 32.000 0.00 0.00 33.76 3.96
75 76 7.455641 TCGAAGGGTTTAAGAATAAATGCAA 57.544 32.000 0.00 0.00 33.76 4.08
76 77 7.535139 TCGAAGGGTTTAAGAATAAATGCAAG 58.465 34.615 0.00 0.00 33.76 4.01
77 78 6.253512 CGAAGGGTTTAAGAATAAATGCAAGC 59.746 38.462 0.00 0.00 33.76 4.01
78 79 5.977635 AGGGTTTAAGAATAAATGCAAGCC 58.022 37.500 0.00 0.00 33.76 4.35
79 80 5.721480 AGGGTTTAAGAATAAATGCAAGCCT 59.279 36.000 0.00 0.00 33.76 4.58
80 81 6.213397 AGGGTTTAAGAATAAATGCAAGCCTT 59.787 34.615 0.00 0.00 33.76 4.35
81 82 6.878923 GGGTTTAAGAATAAATGCAAGCCTTT 59.121 34.615 0.00 1.23 33.76 3.11
82 83 7.064609 GGGTTTAAGAATAAATGCAAGCCTTTC 59.935 37.037 0.00 0.00 33.76 2.62
83 84 7.602265 GGTTTAAGAATAAATGCAAGCCTTTCA 59.398 33.333 0.00 0.00 33.76 2.69
84 85 8.435430 GTTTAAGAATAAATGCAAGCCTTTCAC 58.565 33.333 0.00 0.00 33.76 3.18
85 86 5.990120 AGAATAAATGCAAGCCTTTCACT 57.010 34.783 0.00 0.00 0.00 3.41
86 87 7.466746 AAGAATAAATGCAAGCCTTTCACTA 57.533 32.000 0.00 0.00 0.00 2.74
87 88 7.093322 AGAATAAATGCAAGCCTTTCACTAG 57.907 36.000 0.00 0.00 0.00 2.57
88 89 6.660949 AGAATAAATGCAAGCCTTTCACTAGT 59.339 34.615 0.00 0.00 0.00 2.57
89 90 7.829211 AGAATAAATGCAAGCCTTTCACTAGTA 59.171 33.333 0.00 0.00 0.00 1.82
90 91 7.938140 ATAAATGCAAGCCTTTCACTAGTAA 57.062 32.000 0.00 0.00 0.00 2.24
91 92 6.648879 AAATGCAAGCCTTTCACTAGTAAA 57.351 33.333 0.00 0.00 0.00 2.01
92 93 6.840780 AATGCAAGCCTTTCACTAGTAAAT 57.159 33.333 0.00 0.00 0.00 1.40
93 94 7.938140 AATGCAAGCCTTTCACTAGTAAATA 57.062 32.000 0.00 0.00 0.00 1.40
94 95 8.525290 AATGCAAGCCTTTCACTAGTAAATAT 57.475 30.769 0.00 0.00 0.00 1.28
95 96 7.553881 TGCAAGCCTTTCACTAGTAAATATC 57.446 36.000 0.00 0.00 0.00 1.63
96 97 7.338710 TGCAAGCCTTTCACTAGTAAATATCT 58.661 34.615 0.00 0.00 0.00 1.98
97 98 7.495934 TGCAAGCCTTTCACTAGTAAATATCTC 59.504 37.037 0.00 0.00 0.00 2.75
98 99 7.495934 GCAAGCCTTTCACTAGTAAATATCTCA 59.504 37.037 0.00 0.00 0.00 3.27
99 100 8.821894 CAAGCCTTTCACTAGTAAATATCTCAC 58.178 37.037 0.00 0.00 0.00 3.51
100 101 7.501844 AGCCTTTCACTAGTAAATATCTCACC 58.498 38.462 0.00 0.00 0.00 4.02
101 102 7.345914 AGCCTTTCACTAGTAAATATCTCACCT 59.654 37.037 0.00 0.00 0.00 4.00
102 103 7.654116 GCCTTTCACTAGTAAATATCTCACCTC 59.346 40.741 0.00 0.00 0.00 3.85
103 104 8.145122 CCTTTCACTAGTAAATATCTCACCTCC 58.855 40.741 0.00 0.00 0.00 4.30
104 105 8.603898 TTTCACTAGTAAATATCTCACCTCCA 57.396 34.615 0.00 0.00 0.00 3.86
105 106 8.603898 TTCACTAGTAAATATCTCACCTCCAA 57.396 34.615 0.00 0.00 0.00 3.53
106 107 8.783660 TCACTAGTAAATATCTCACCTCCAAT 57.216 34.615 0.00 0.00 0.00 3.16
107 108 8.861086 TCACTAGTAAATATCTCACCTCCAATC 58.139 37.037 0.00 0.00 0.00 2.67
108 109 7.810282 CACTAGTAAATATCTCACCTCCAATCG 59.190 40.741 0.00 0.00 0.00 3.34
109 110 6.978674 AGTAAATATCTCACCTCCAATCGA 57.021 37.500 0.00 0.00 0.00 3.59
110 111 7.361457 AGTAAATATCTCACCTCCAATCGAA 57.639 36.000 0.00 0.00 0.00 3.71
111 112 7.437748 AGTAAATATCTCACCTCCAATCGAAG 58.562 38.462 0.00 0.00 0.00 3.79
112 113 4.881019 ATATCTCACCTCCAATCGAAGG 57.119 45.455 0.00 0.00 0.00 3.46
113 114 1.195115 TCTCACCTCCAATCGAAGGG 58.805 55.000 5.88 2.74 0.00 3.95
114 115 0.905357 CTCACCTCCAATCGAAGGGT 59.095 55.000 5.88 0.00 0.00 4.34
115 116 1.279271 CTCACCTCCAATCGAAGGGTT 59.721 52.381 5.88 0.00 0.00 4.11
116 117 1.702957 TCACCTCCAATCGAAGGGTTT 59.297 47.619 5.88 0.00 0.00 3.27
117 118 2.907696 TCACCTCCAATCGAAGGGTTTA 59.092 45.455 5.88 0.00 0.00 2.01
118 119 3.328343 TCACCTCCAATCGAAGGGTTTAA 59.672 43.478 5.88 0.00 0.00 1.52
119 120 3.689649 CACCTCCAATCGAAGGGTTTAAG 59.310 47.826 5.88 0.00 0.00 1.85
120 121 3.585732 ACCTCCAATCGAAGGGTTTAAGA 59.414 43.478 5.88 0.00 0.00 2.10
121 122 4.042435 ACCTCCAATCGAAGGGTTTAAGAA 59.958 41.667 5.88 0.00 0.00 2.52
122 123 5.193679 CCTCCAATCGAAGGGTTTAAGAAT 58.806 41.667 7.35 0.00 0.00 2.40
123 124 5.066505 CCTCCAATCGAAGGGTTTAAGAATG 59.933 44.000 7.35 0.00 0.00 2.67
124 125 4.947388 TCCAATCGAAGGGTTTAAGAATGG 59.053 41.667 7.35 0.00 34.21 3.16
125 126 4.947388 CCAATCGAAGGGTTTAAGAATGGA 59.053 41.667 0.00 0.00 34.69 3.41
126 127 5.163652 CCAATCGAAGGGTTTAAGAATGGAC 60.164 44.000 0.00 0.00 34.69 4.02
127 128 3.592059 TCGAAGGGTTTAAGAATGGACG 58.408 45.455 0.00 0.00 0.00 4.79
128 129 2.095372 CGAAGGGTTTAAGAATGGACGC 59.905 50.000 0.00 0.00 0.00 5.19
129 130 2.871096 AGGGTTTAAGAATGGACGCA 57.129 45.000 0.00 0.00 0.00 5.24
130 131 2.711542 AGGGTTTAAGAATGGACGCAG 58.288 47.619 0.00 0.00 0.00 5.18
131 132 1.743394 GGGTTTAAGAATGGACGCAGG 59.257 52.381 0.00 0.00 0.00 4.85
132 133 1.132453 GGTTTAAGAATGGACGCAGGC 59.868 52.381 0.00 0.00 0.00 4.85
133 134 1.132453 GTTTAAGAATGGACGCAGGCC 59.868 52.381 0.00 0.00 0.00 5.19
134 135 0.618458 TTAAGAATGGACGCAGGCCT 59.382 50.000 0.00 0.00 0.00 5.19
135 136 0.618458 TAAGAATGGACGCAGGCCTT 59.382 50.000 0.00 0.00 0.00 4.35
136 137 0.251341 AAGAATGGACGCAGGCCTTT 60.251 50.000 0.00 0.00 0.00 3.11
137 138 0.678048 AGAATGGACGCAGGCCTTTC 60.678 55.000 0.00 16.22 38.92 2.62
138 139 0.960364 GAATGGACGCAGGCCTTTCA 60.960 55.000 0.00 0.00 38.65 2.69
139 140 0.323725 AATGGACGCAGGCCTTTCAT 60.324 50.000 0.00 0.00 0.00 2.57
140 141 1.033746 ATGGACGCAGGCCTTTCATG 61.034 55.000 0.00 0.00 0.00 3.07
141 142 2.409870 GGACGCAGGCCTTTCATGG 61.410 63.158 0.00 0.00 0.00 3.66
142 143 2.361610 ACGCAGGCCTTTCATGGG 60.362 61.111 0.00 2.94 43.77 4.00
143 144 2.361610 CGCAGGCCTTTCATGGGT 60.362 61.111 0.00 0.00 35.13 4.51
144 145 2.409870 CGCAGGCCTTTCATGGGTC 61.410 63.158 0.00 0.00 35.13 4.46
145 146 1.304381 GCAGGCCTTTCATGGGTCA 60.304 57.895 0.00 0.00 0.00 4.02
146 147 0.899717 GCAGGCCTTTCATGGGTCAA 60.900 55.000 0.00 0.00 0.00 3.18
147 148 1.856629 CAGGCCTTTCATGGGTCAAT 58.143 50.000 0.00 0.00 0.00 2.57
148 149 2.949963 GCAGGCCTTTCATGGGTCAATA 60.950 50.000 0.00 0.00 0.00 1.90
149 150 3.364549 CAGGCCTTTCATGGGTCAATAA 58.635 45.455 0.00 0.00 0.00 1.40
150 151 3.768757 CAGGCCTTTCATGGGTCAATAAA 59.231 43.478 0.00 0.00 0.00 1.40
151 152 4.406649 CAGGCCTTTCATGGGTCAATAAAT 59.593 41.667 0.00 0.00 0.00 1.40
152 153 5.032170 AGGCCTTTCATGGGTCAATAAATT 58.968 37.500 0.00 0.00 0.00 1.82
153 154 5.104817 AGGCCTTTCATGGGTCAATAAATTG 60.105 40.000 0.00 0.00 39.10 2.32
154 155 5.338300 GGCCTTTCATGGGTCAATAAATTGT 60.338 40.000 0.00 0.00 38.84 2.71
155 156 6.172630 GCCTTTCATGGGTCAATAAATTGTT 58.827 36.000 2.80 0.00 38.84 2.83
156 157 6.313658 GCCTTTCATGGGTCAATAAATTGTTC 59.686 38.462 2.80 0.00 38.84 3.18
157 158 7.385267 CCTTTCATGGGTCAATAAATTGTTCA 58.615 34.615 2.80 1.59 38.84 3.18
158 159 7.877097 CCTTTCATGGGTCAATAAATTGTTCAA 59.123 33.333 2.80 0.00 38.84 2.69
159 160 9.270640 CTTTCATGGGTCAATAAATTGTTCAAA 57.729 29.630 2.80 0.00 38.84 2.69
160 161 9.618890 TTTCATGGGTCAATAAATTGTTCAAAA 57.381 25.926 2.80 0.00 38.84 2.44
161 162 9.618890 TTCATGGGTCAATAAATTGTTCAAAAA 57.381 25.926 2.80 0.00 38.84 1.94
162 163 9.790344 TCATGGGTCAATAAATTGTTCAAAAAT 57.210 25.926 2.80 0.00 38.84 1.82
211 212 9.754382 AATCCAATAAATCATAAGTGCATTCAC 57.246 29.630 0.00 0.00 43.44 3.18
243 244 9.739276 TTCTAGAGAAAATTCAGCTTAAATGGA 57.261 29.630 0.00 0.00 0.00 3.41
244 245 9.388506 TCTAGAGAAAATTCAGCTTAAATGGAG 57.611 33.333 0.00 0.00 0.00 3.86
245 246 6.861144 AGAGAAAATTCAGCTTAAATGGAGC 58.139 36.000 0.00 0.00 40.43 4.70
246 247 6.435277 AGAGAAAATTCAGCTTAAATGGAGCA 59.565 34.615 0.00 0.00 42.56 4.26
247 248 6.996509 AGAAAATTCAGCTTAAATGGAGCAA 58.003 32.000 0.00 0.00 42.56 3.91
248 249 7.095270 AGAAAATTCAGCTTAAATGGAGCAAG 58.905 34.615 0.00 0.00 42.56 4.01
249 250 4.996788 ATTCAGCTTAAATGGAGCAAGG 57.003 40.909 0.00 0.00 42.56 3.61
250 251 2.726821 TCAGCTTAAATGGAGCAAGGG 58.273 47.619 0.00 0.00 42.56 3.95
251 252 2.308570 TCAGCTTAAATGGAGCAAGGGA 59.691 45.455 0.00 0.00 42.56 4.20
252 253 3.053395 TCAGCTTAAATGGAGCAAGGGAT 60.053 43.478 0.00 0.00 42.56 3.85
253 254 3.703052 CAGCTTAAATGGAGCAAGGGATT 59.297 43.478 0.00 0.00 42.56 3.01
254 255 3.703052 AGCTTAAATGGAGCAAGGGATTG 59.297 43.478 0.00 0.00 42.56 2.67
261 262 4.540153 GCAAGGGATTGCGAGCTA 57.460 55.556 0.00 0.00 38.26 3.32
262 263 3.012560 GCAAGGGATTGCGAGCTAT 57.987 52.632 0.00 0.00 38.26 2.97
263 264 1.312815 GCAAGGGATTGCGAGCTATT 58.687 50.000 0.00 0.00 38.26 1.73
264 265 1.002033 GCAAGGGATTGCGAGCTATTG 60.002 52.381 0.00 3.47 38.26 1.90
265 266 2.564771 CAAGGGATTGCGAGCTATTGA 58.435 47.619 0.00 0.00 0.00 2.57
266 267 2.246719 AGGGATTGCGAGCTATTGAC 57.753 50.000 0.00 0.00 0.00 3.18
267 268 1.486310 AGGGATTGCGAGCTATTGACA 59.514 47.619 0.00 0.00 0.00 3.58
268 269 2.105477 AGGGATTGCGAGCTATTGACAT 59.895 45.455 0.00 0.00 0.00 3.06
269 270 2.880890 GGGATTGCGAGCTATTGACATT 59.119 45.455 0.00 0.00 0.00 2.71
270 271 3.316308 GGGATTGCGAGCTATTGACATTT 59.684 43.478 0.00 0.00 0.00 2.32
271 272 4.531332 GGATTGCGAGCTATTGACATTTC 58.469 43.478 0.00 0.00 0.00 2.17
272 273 4.274459 GGATTGCGAGCTATTGACATTTCT 59.726 41.667 0.00 0.00 0.00 2.52
273 274 5.466728 GGATTGCGAGCTATTGACATTTCTA 59.533 40.000 0.00 0.00 0.00 2.10
274 275 6.017934 GGATTGCGAGCTATTGACATTTCTAA 60.018 38.462 0.00 0.00 0.00 2.10
275 276 6.925610 TTGCGAGCTATTGACATTTCTAAT 57.074 33.333 0.00 0.00 0.00 1.73
276 277 6.925610 TGCGAGCTATTGACATTTCTAATT 57.074 33.333 0.00 0.00 0.00 1.40
277 278 6.718388 TGCGAGCTATTGACATTTCTAATTG 58.282 36.000 0.00 0.00 0.00 2.32
278 279 6.138761 GCGAGCTATTGACATTTCTAATTGG 58.861 40.000 0.00 0.00 0.00 3.16
279 280 6.238484 GCGAGCTATTGACATTTCTAATTGGT 60.238 38.462 0.00 0.00 0.00 3.67
280 281 7.679638 GCGAGCTATTGACATTTCTAATTGGTT 60.680 37.037 0.00 0.00 0.00 3.67
281 282 7.641411 CGAGCTATTGACATTTCTAATTGGTTG 59.359 37.037 0.00 0.00 0.00 3.77
282 283 7.260603 AGCTATTGACATTTCTAATTGGTTGC 58.739 34.615 0.00 0.00 0.00 4.17
283 284 7.123247 AGCTATTGACATTTCTAATTGGTTGCT 59.877 33.333 0.00 0.00 0.00 3.91
284 285 7.221452 GCTATTGACATTTCTAATTGGTTGCTG 59.779 37.037 0.00 0.00 0.00 4.41
285 286 6.647334 TTGACATTTCTAATTGGTTGCTGA 57.353 33.333 0.00 0.00 0.00 4.26
286 287 6.839124 TGACATTTCTAATTGGTTGCTGAT 57.161 33.333 0.00 0.00 0.00 2.90
287 288 6.623486 TGACATTTCTAATTGGTTGCTGATG 58.377 36.000 0.00 0.00 0.00 3.07
288 289 6.209192 TGACATTTCTAATTGGTTGCTGATGT 59.791 34.615 0.00 0.00 0.00 3.06
289 290 6.392354 ACATTTCTAATTGGTTGCTGATGTG 58.608 36.000 0.00 0.00 0.00 3.21
290 291 5.389859 TTTCTAATTGGTTGCTGATGTGG 57.610 39.130 0.00 0.00 0.00 4.17
291 292 2.754552 TCTAATTGGTTGCTGATGTGGC 59.245 45.455 0.00 0.00 0.00 5.01
292 293 0.609662 AATTGGTTGCTGATGTGGCC 59.390 50.000 0.00 0.00 0.00 5.36
293 294 1.597797 ATTGGTTGCTGATGTGGCCG 61.598 55.000 0.00 0.00 0.00 6.13
294 295 3.443045 GGTTGCTGATGTGGCCGG 61.443 66.667 0.00 0.00 0.00 6.13
295 296 2.359850 GTTGCTGATGTGGCCGGA 60.360 61.111 5.05 0.00 0.00 5.14
296 297 1.971167 GTTGCTGATGTGGCCGGAA 60.971 57.895 5.05 0.00 0.00 4.30
297 298 1.001020 TTGCTGATGTGGCCGGAAT 60.001 52.632 5.05 0.00 0.00 3.01
298 299 0.611618 TTGCTGATGTGGCCGGAATT 60.612 50.000 5.05 0.00 0.00 2.17
299 300 0.611618 TGCTGATGTGGCCGGAATTT 60.612 50.000 5.05 0.00 0.00 1.82
300 301 1.340502 TGCTGATGTGGCCGGAATTTA 60.341 47.619 5.05 0.00 0.00 1.40
301 302 1.956477 GCTGATGTGGCCGGAATTTAT 59.044 47.619 5.05 0.00 0.00 1.40
302 303 2.362077 GCTGATGTGGCCGGAATTTATT 59.638 45.455 5.05 0.00 0.00 1.40
303 304 3.181476 GCTGATGTGGCCGGAATTTATTT 60.181 43.478 5.05 0.00 0.00 1.40
304 305 4.680440 GCTGATGTGGCCGGAATTTATTTT 60.680 41.667 5.05 0.00 0.00 1.82
305 306 5.413309 TGATGTGGCCGGAATTTATTTTT 57.587 34.783 5.05 0.00 0.00 1.94
321 322 2.875188 TTTTTGTCACCGGTGCACT 58.125 47.368 30.25 0.00 0.00 4.40
322 323 1.178276 TTTTTGTCACCGGTGCACTT 58.822 45.000 30.25 0.00 0.00 3.16
323 324 0.453793 TTTTGTCACCGGTGCACTTG 59.546 50.000 30.25 11.66 0.00 3.16
324 325 1.999071 TTTGTCACCGGTGCACTTGC 61.999 55.000 30.25 14.44 42.50 4.01
335 336 1.363807 GCACTTGCAAACTGGACCC 59.636 57.895 0.00 0.00 41.59 4.46
336 337 1.391157 GCACTTGCAAACTGGACCCA 61.391 55.000 0.00 0.00 41.59 4.51
337 338 3.285407 GCACTTGCAAACTGGACCCAG 62.285 57.143 14.16 14.16 44.19 4.45
347 348 2.638480 CTGGACCCAGTTGTCAGAAA 57.362 50.000 7.88 0.00 39.10 2.52
348 349 3.146104 CTGGACCCAGTTGTCAGAAAT 57.854 47.619 7.88 0.00 39.10 2.17
349 350 3.077359 CTGGACCCAGTTGTCAGAAATC 58.923 50.000 7.88 0.00 39.10 2.17
350 351 2.441375 TGGACCCAGTTGTCAGAAATCA 59.559 45.455 0.00 0.00 36.97 2.57
351 352 3.074390 TGGACCCAGTTGTCAGAAATCAT 59.926 43.478 0.00 0.00 36.97 2.45
352 353 3.441572 GGACCCAGTTGTCAGAAATCATG 59.558 47.826 0.00 0.00 36.97 3.07
353 354 4.074970 GACCCAGTTGTCAGAAATCATGT 58.925 43.478 0.00 0.00 35.29 3.21
354 355 4.074970 ACCCAGTTGTCAGAAATCATGTC 58.925 43.478 0.00 0.00 0.00 3.06
355 356 4.074259 CCCAGTTGTCAGAAATCATGTCA 58.926 43.478 0.00 0.00 0.00 3.58
356 357 4.520111 CCCAGTTGTCAGAAATCATGTCAA 59.480 41.667 0.00 0.00 0.00 3.18
357 358 5.455392 CCAGTTGTCAGAAATCATGTCAAC 58.545 41.667 7.62 7.62 42.90 3.18
358 359 5.008911 CCAGTTGTCAGAAATCATGTCAACA 59.991 40.000 14.97 0.00 44.10 3.33
359 360 5.911280 CAGTTGTCAGAAATCATGTCAACAC 59.089 40.000 14.97 0.00 44.10 3.32
360 361 5.589855 AGTTGTCAGAAATCATGTCAACACA 59.410 36.000 14.97 0.00 44.10 3.72
361 362 5.422666 TGTCAGAAATCATGTCAACACAC 57.577 39.130 0.00 0.00 34.48 3.82
362 363 4.024977 TGTCAGAAATCATGTCAACACACG 60.025 41.667 0.00 0.00 34.48 4.49
363 364 4.024893 GTCAGAAATCATGTCAACACACGT 60.025 41.667 0.00 0.00 34.48 4.49
364 365 5.176774 GTCAGAAATCATGTCAACACACGTA 59.823 40.000 0.00 0.00 34.48 3.57
365 366 5.755861 TCAGAAATCATGTCAACACACGTAA 59.244 36.000 0.00 0.00 34.48 3.18
366 367 6.258947 TCAGAAATCATGTCAACACACGTAAA 59.741 34.615 0.00 0.00 34.48 2.01
367 368 6.356977 CAGAAATCATGTCAACACACGTAAAC 59.643 38.462 0.00 0.00 34.48 2.01
368 369 3.845231 TCATGTCAACACACGTAAACG 57.155 42.857 0.04 0.04 46.33 3.60
369 370 3.445857 TCATGTCAACACACGTAAACGA 58.554 40.909 9.86 0.00 43.39 3.85
370 371 4.052608 TCATGTCAACACACGTAAACGAT 58.947 39.130 9.86 0.00 43.39 3.73
371 372 3.845231 TGTCAACACACGTAAACGATG 57.155 42.857 9.86 9.37 43.02 3.84
372 373 2.540516 TGTCAACACACGTAAACGATGG 59.459 45.455 9.86 1.17 43.02 3.51
373 374 2.796031 GTCAACACACGTAAACGATGGA 59.204 45.455 9.86 0.00 43.02 3.41
374 375 3.430895 GTCAACACACGTAAACGATGGAT 59.569 43.478 9.86 0.00 43.02 3.41
375 376 4.059511 TCAACACACGTAAACGATGGATT 58.940 39.130 9.86 1.19 43.02 3.01
376 377 5.118971 GTCAACACACGTAAACGATGGATTA 59.881 40.000 9.86 0.00 43.02 1.75
377 378 5.346551 TCAACACACGTAAACGATGGATTAG 59.653 40.000 9.86 0.00 43.02 1.73
378 379 5.063180 ACACACGTAAACGATGGATTAGA 57.937 39.130 9.86 0.00 43.02 2.10
379 380 4.860907 ACACACGTAAACGATGGATTAGAC 59.139 41.667 9.86 0.00 43.02 2.59
380 381 4.266976 CACACGTAAACGATGGATTAGACC 59.733 45.833 9.86 0.00 43.02 3.85
381 382 4.159135 ACACGTAAACGATGGATTAGACCT 59.841 41.667 9.86 0.00 43.02 3.85
382 383 5.357878 ACACGTAAACGATGGATTAGACCTA 59.642 40.000 9.86 0.00 43.02 3.08
383 384 5.913514 CACGTAAACGATGGATTAGACCTAG 59.086 44.000 9.86 0.00 43.02 3.02
384 385 5.591877 ACGTAAACGATGGATTAGACCTAGT 59.408 40.000 9.86 0.00 43.02 2.57
385 386 6.096001 ACGTAAACGATGGATTAGACCTAGTT 59.904 38.462 9.86 0.00 43.02 2.24
386 387 6.417044 CGTAAACGATGGATTAGACCTAGTTG 59.583 42.308 0.00 0.00 43.02 3.16
387 388 4.323553 ACGATGGATTAGACCTAGTTGC 57.676 45.455 0.00 0.00 0.00 4.17
388 389 3.704566 ACGATGGATTAGACCTAGTTGCA 59.295 43.478 0.00 0.00 0.00 4.08
389 390 4.161565 ACGATGGATTAGACCTAGTTGCAA 59.838 41.667 0.00 0.00 0.00 4.08
390 391 4.508124 CGATGGATTAGACCTAGTTGCAAC 59.492 45.833 22.17 22.17 0.00 4.17
391 392 3.857052 TGGATTAGACCTAGTTGCAACG 58.143 45.455 23.21 12.25 0.00 4.10
392 393 3.512329 TGGATTAGACCTAGTTGCAACGA 59.488 43.478 23.21 17.65 0.00 3.85
393 394 4.020928 TGGATTAGACCTAGTTGCAACGAA 60.021 41.667 23.21 14.70 0.00 3.85
394 395 5.116882 GGATTAGACCTAGTTGCAACGAAT 58.883 41.667 23.21 14.11 0.00 3.34
395 396 5.585047 GGATTAGACCTAGTTGCAACGAATT 59.415 40.000 23.21 9.04 0.00 2.17
396 397 6.759827 GGATTAGACCTAGTTGCAACGAATTA 59.240 38.462 23.21 9.73 0.00 1.40
397 398 6.956299 TTAGACCTAGTTGCAACGAATTAC 57.044 37.500 23.21 14.02 0.00 1.89
398 399 4.251268 AGACCTAGTTGCAACGAATTACC 58.749 43.478 23.21 10.78 0.00 2.85
399 400 2.997986 ACCTAGTTGCAACGAATTACCG 59.002 45.455 23.21 5.74 0.00 4.02
400 401 3.255725 CCTAGTTGCAACGAATTACCGA 58.744 45.455 23.21 1.80 0.00 4.69
401 402 3.680937 CCTAGTTGCAACGAATTACCGAA 59.319 43.478 23.21 0.60 0.00 4.30
402 403 4.331717 CCTAGTTGCAACGAATTACCGAAT 59.668 41.667 23.21 4.46 0.00 3.34
403 404 5.521010 CCTAGTTGCAACGAATTACCGAATA 59.479 40.000 23.21 5.40 0.00 1.75
404 405 6.202188 CCTAGTTGCAACGAATTACCGAATAT 59.798 38.462 23.21 3.82 0.00 1.28
405 406 7.383029 CCTAGTTGCAACGAATTACCGAATATA 59.617 37.037 23.21 4.79 0.00 0.86
406 407 7.724305 AGTTGCAACGAATTACCGAATATAT 57.276 32.000 23.21 0.00 0.00 0.86
407 408 7.572759 AGTTGCAACGAATTACCGAATATATG 58.427 34.615 23.21 0.00 0.00 1.78
408 409 7.439955 AGTTGCAACGAATTACCGAATATATGA 59.560 33.333 23.21 0.00 0.00 2.15
409 410 7.899178 TGCAACGAATTACCGAATATATGAT 57.101 32.000 0.00 0.00 0.00 2.45
410 411 7.738345 TGCAACGAATTACCGAATATATGATG 58.262 34.615 0.00 0.00 0.00 3.07
411 412 7.386573 TGCAACGAATTACCGAATATATGATGT 59.613 33.333 0.00 0.00 0.00 3.06
412 413 8.227791 GCAACGAATTACCGAATATATGATGTT 58.772 33.333 0.00 0.00 0.00 2.71
418 419 9.677567 AATTACCGAATATATGATGTTTTGTGC 57.322 29.630 0.00 0.00 0.00 4.57
419 420 6.691754 ACCGAATATATGATGTTTTGTGCA 57.308 33.333 0.00 0.00 0.00 4.57
420 421 7.094508 ACCGAATATATGATGTTTTGTGCAA 57.905 32.000 0.00 0.00 0.00 4.08
421 422 6.972328 ACCGAATATATGATGTTTTGTGCAAC 59.028 34.615 0.00 0.00 37.35 4.17
438 439 5.147162 GTGCAACAAATCTGTAACACTAGC 58.853 41.667 0.00 0.00 37.99 3.42
439 440 4.819088 TGCAACAAATCTGTAACACTAGCA 59.181 37.500 0.00 0.00 33.45 3.49
440 441 5.473162 TGCAACAAATCTGTAACACTAGCAT 59.527 36.000 0.00 0.00 33.45 3.79
441 442 6.024049 GCAACAAATCTGTAACACTAGCATC 58.976 40.000 0.00 0.00 33.45 3.91
442 443 6.348458 GCAACAAATCTGTAACACTAGCATCA 60.348 38.462 0.00 0.00 33.45 3.07
443 444 7.584108 CAACAAATCTGTAACACTAGCATCAA 58.416 34.615 0.00 0.00 33.45 2.57
444 445 7.744087 ACAAATCTGTAACACTAGCATCAAA 57.256 32.000 0.00 0.00 32.54 2.69
445 446 8.165239 ACAAATCTGTAACACTAGCATCAAAA 57.835 30.769 0.00 0.00 32.54 2.44
446 447 8.629158 ACAAATCTGTAACACTAGCATCAAAAA 58.371 29.630 0.00 0.00 32.54 1.94
447 448 9.630098 CAAATCTGTAACACTAGCATCAAAAAT 57.370 29.630 0.00 0.00 0.00 1.82
450 451 8.492673 TCTGTAACACTAGCATCAAAAATAGG 57.507 34.615 0.00 0.00 0.00 2.57
451 452 8.100791 TCTGTAACACTAGCATCAAAAATAGGT 58.899 33.333 0.00 0.00 0.00 3.08
452 453 8.039603 TGTAACACTAGCATCAAAAATAGGTG 57.960 34.615 0.00 0.00 0.00 4.00
453 454 6.515272 AACACTAGCATCAAAAATAGGTGG 57.485 37.500 0.00 0.00 0.00 4.61
454 455 4.399303 ACACTAGCATCAAAAATAGGTGGC 59.601 41.667 0.00 0.00 0.00 5.01
455 456 4.641989 CACTAGCATCAAAAATAGGTGGCT 59.358 41.667 0.00 0.00 0.00 4.75
456 457 4.641989 ACTAGCATCAAAAATAGGTGGCTG 59.358 41.667 0.00 0.00 0.00 4.85
457 458 2.762327 AGCATCAAAAATAGGTGGCTGG 59.238 45.455 0.00 0.00 0.00 4.85
458 459 2.497273 GCATCAAAAATAGGTGGCTGGT 59.503 45.455 0.00 0.00 0.00 4.00
459 460 3.676873 GCATCAAAAATAGGTGGCTGGTG 60.677 47.826 0.00 0.00 0.00 4.17
460 461 1.892474 TCAAAAATAGGTGGCTGGTGC 59.108 47.619 0.00 0.00 38.76 5.01
461 462 1.617850 CAAAAATAGGTGGCTGGTGCA 59.382 47.619 0.00 0.00 41.91 4.57
462 463 2.008242 AAAATAGGTGGCTGGTGCAA 57.992 45.000 0.00 0.00 41.91 4.08
463 464 2.236489 AAATAGGTGGCTGGTGCAAT 57.764 45.000 0.00 0.00 41.91 3.56
464 465 2.236489 AATAGGTGGCTGGTGCAATT 57.764 45.000 0.00 0.00 41.91 2.32
465 466 2.236489 ATAGGTGGCTGGTGCAATTT 57.764 45.000 0.00 0.00 41.91 1.82
466 467 2.008242 TAGGTGGCTGGTGCAATTTT 57.992 45.000 0.00 0.00 41.91 1.82
467 468 0.681175 AGGTGGCTGGTGCAATTTTC 59.319 50.000 0.00 0.00 41.91 2.29
468 469 0.681175 GGTGGCTGGTGCAATTTTCT 59.319 50.000 0.00 0.00 41.91 2.52
469 470 1.337167 GGTGGCTGGTGCAATTTTCTC 60.337 52.381 0.00 0.00 41.91 2.87
470 471 1.615392 GTGGCTGGTGCAATTTTCTCT 59.385 47.619 0.00 0.00 41.91 3.10
471 472 1.888512 TGGCTGGTGCAATTTTCTCTC 59.111 47.619 0.00 0.00 41.91 3.20
475 476 2.151202 TGGTGCAATTTTCTCTCGGAC 58.849 47.619 0.00 0.00 0.00 4.79
536 537 2.871182 TTGGTTCAGATCGGATCTCG 57.129 50.000 17.41 12.85 37.58 4.04
546 547 1.880340 CGGATCTCGGCTGCAACTC 60.880 63.158 0.50 0.00 34.75 3.01
547 548 1.522580 GGATCTCGGCTGCAACTCC 60.523 63.158 0.50 0.00 0.00 3.85
577 594 0.615331 TCCAACATGCTGGACCTCTC 59.385 55.000 13.96 0.00 40.71 3.20
671 694 3.550030 CGTTCCAGGTTTGACAATTCACC 60.550 47.826 0.00 0.00 0.00 4.02
679 702 0.671163 TGACAATTCACCCGCCGTAC 60.671 55.000 0.00 0.00 0.00 3.67
680 703 1.363885 GACAATTCACCCGCCGTACC 61.364 60.000 0.00 0.00 0.00 3.34
681 704 1.376166 CAATTCACCCGCCGTACCA 60.376 57.895 0.00 0.00 0.00 3.25
682 705 0.746563 CAATTCACCCGCCGTACCAT 60.747 55.000 0.00 0.00 0.00 3.55
683 706 0.831966 AATTCACCCGCCGTACCATA 59.168 50.000 0.00 0.00 0.00 2.74
691 714 2.372690 GCCGTACCATATCAGCGCG 61.373 63.158 0.00 0.00 0.00 6.86
711 737 2.105960 GATATTGTCGCTGCCACGCC 62.106 60.000 0.00 0.00 0.00 5.68
777 803 1.068434 GGGAGCTTCCAGATCGAAGAG 59.932 57.143 6.02 0.80 41.57 2.85
784 810 1.134189 TCCAGATCGAAGAGACCGCTA 60.134 52.381 0.00 0.00 43.63 4.26
787 813 2.614520 CAGATCGAAGAGACCGCTAAGA 59.385 50.000 0.00 0.00 43.63 2.10
852 890 2.613691 GACCGCTCCTCGTTAAAATCA 58.386 47.619 0.00 0.00 36.19 2.57
854 892 2.740447 ACCGCTCCTCGTTAAAATCAAC 59.260 45.455 0.00 0.00 36.19 3.18
1514 3532 0.165727 CGTGCGTGCTATGCTTTTGA 59.834 50.000 0.00 0.00 0.00 2.69
1519 3537 2.095768 GCGTGCTATGCTTTTGAACTGA 60.096 45.455 0.00 0.00 0.00 3.41
1521 3539 4.153986 CGTGCTATGCTTTTGAACTGAAG 58.846 43.478 0.00 0.00 0.00 3.02
1541 3560 5.538813 TGAAGTAGTTTAGAGTTCAGCAGGA 59.461 40.000 0.00 0.00 32.54 3.86
1543 3562 5.971763 AGTAGTTTAGAGTTCAGCAGGATG 58.028 41.667 0.00 0.00 40.87 3.51
1545 3564 5.489792 AGTTTAGAGTTCAGCAGGATGAA 57.510 39.130 0.00 0.00 39.69 2.57
1546 3565 6.059787 AGTTTAGAGTTCAGCAGGATGAAT 57.940 37.500 3.08 0.00 41.05 2.57
1547 3566 6.479884 AGTTTAGAGTTCAGCAGGATGAATT 58.520 36.000 3.08 0.00 41.05 2.17
1549 3568 3.015327 AGAGTTCAGCAGGATGAATTGC 58.985 45.455 3.08 0.00 41.05 3.56
1596 3626 0.538516 TTGGTGGGATTGTTGGACCG 60.539 55.000 0.00 0.00 0.00 4.79
1608 3638 3.290710 TGTTGGACCGGTATACCTAGAC 58.709 50.000 19.68 10.75 0.00 2.59
1764 3808 3.691118 TGCATGTTTGAACTAGGCTGATC 59.309 43.478 0.00 0.00 0.00 2.92
1787 3831 7.643528 TCGTGATAGAATATGATTTGTGCTC 57.356 36.000 0.00 0.00 0.00 4.26
1790 3834 7.170489 CGTGATAGAATATGATTTGTGCTCTGT 59.830 37.037 0.00 0.00 0.00 3.41
1903 3947 9.200817 AGTGAATATTAGGTAAATTGTGCCAAT 57.799 29.630 0.00 0.00 33.55 3.16
1961 4005 4.855388 GTGATGAACAGTGCACATGAATTC 59.145 41.667 21.04 14.24 0.00 2.17
2049 4120 1.824230 TCTTGTGGTGTGCTTGCTTTT 59.176 42.857 0.00 0.00 0.00 2.27
2099 4170 9.478238 AGCTCTCAGTATGACATGATAGAATAT 57.522 33.333 0.00 0.00 42.56 1.28
2603 4676 6.430000 TGAAAGAAAACATGCTAACTACTCCC 59.570 38.462 0.00 0.00 0.00 4.30
2612 4685 2.479219 GCTAACTACTCCCTCCGTTTCG 60.479 54.545 0.00 0.00 0.00 3.46
2620 4693 5.603170 ACTCCCTCCGTTTCGAAATATAA 57.397 39.130 14.69 0.00 0.00 0.98
2621 4694 5.598769 ACTCCCTCCGTTTCGAAATATAAG 58.401 41.667 14.69 9.26 0.00 1.73
2622 4695 5.128335 ACTCCCTCCGTTTCGAAATATAAGT 59.872 40.000 14.69 8.70 0.00 2.24
2623 4696 5.981174 TCCCTCCGTTTCGAAATATAAGTT 58.019 37.500 14.69 0.00 0.00 2.66
2624 4697 6.408869 TCCCTCCGTTTCGAAATATAAGTTT 58.591 36.000 14.69 0.00 0.00 2.66
2625 4698 6.880529 TCCCTCCGTTTCGAAATATAAGTTTT 59.119 34.615 14.69 0.00 0.00 2.43
2626 4699 7.391275 TCCCTCCGTTTCGAAATATAAGTTTTT 59.609 33.333 14.69 0.00 0.00 1.94
2655 4728 9.314321 AGAGATTTCAATACAAACTACATACGG 57.686 33.333 0.00 0.00 0.00 4.02
2656 4729 9.309516 GAGATTTCAATACAAACTACATACGGA 57.690 33.333 0.00 0.00 0.00 4.69
2657 4730 9.832445 AGATTTCAATACAAACTACATACGGAT 57.168 29.630 0.00 0.00 0.00 4.18
2658 4731 9.864034 GATTTCAATACAAACTACATACGGATG 57.136 33.333 5.94 5.94 39.16 3.51
2660 4733 9.872721 TTTCAATACAAACTACATACGGATGTA 57.127 29.630 19.32 19.32 44.77 2.29
2668 4741 9.504710 CAAACTACATACGGATGTATATAGAGC 57.495 37.037 20.64 0.00 45.42 4.09
2669 4742 9.463902 AAACTACATACGGATGTATATAGAGCT 57.536 33.333 20.64 0.00 45.42 4.09
2689 4762 8.257830 AGAGCTATTTTAGAGTGTAGTTTTGC 57.742 34.615 0.00 0.00 0.00 3.68
2690 4763 8.097662 AGAGCTATTTTAGAGTGTAGTTTTGCT 58.902 33.333 0.00 0.00 0.00 3.91
2691 4764 8.257830 AGCTATTTTAGAGTGTAGTTTTGCTC 57.742 34.615 0.00 0.00 0.00 4.26
2692 4765 8.097662 AGCTATTTTAGAGTGTAGTTTTGCTCT 58.902 33.333 0.00 0.00 40.83 4.09
2693 4766 8.171840 GCTATTTTAGAGTGTAGTTTTGCTCTG 58.828 37.037 0.00 0.00 38.58 3.35
2694 4767 9.209175 CTATTTTAGAGTGTAGTTTTGCTCTGT 57.791 33.333 0.00 0.00 38.58 3.41
2696 4769 9.726438 ATTTTAGAGTGTAGTTTTGCTCTGTAT 57.274 29.630 0.00 0.00 38.58 2.29
2697 4770 8.534333 TTTAGAGTGTAGTTTTGCTCTGTATG 57.466 34.615 0.00 0.00 38.58 2.39
2698 4771 6.102897 AGAGTGTAGTTTTGCTCTGTATGT 57.897 37.500 0.00 0.00 37.00 2.29
2699 4772 7.228314 AGAGTGTAGTTTTGCTCTGTATGTA 57.772 36.000 0.00 0.00 37.00 2.29
2700 4773 7.316640 AGAGTGTAGTTTTGCTCTGTATGTAG 58.683 38.462 0.00 0.00 37.00 2.74
2701 4774 6.994221 AGTGTAGTTTTGCTCTGTATGTAGT 58.006 36.000 0.00 0.00 0.00 2.73
2702 4775 7.091443 AGTGTAGTTTTGCTCTGTATGTAGTC 58.909 38.462 0.00 0.00 0.00 2.59
2703 4776 6.310711 GTGTAGTTTTGCTCTGTATGTAGTCC 59.689 42.308 0.00 0.00 0.00 3.85
2704 4777 5.483685 AGTTTTGCTCTGTATGTAGTCCA 57.516 39.130 0.00 0.00 0.00 4.02
2705 4778 6.054860 AGTTTTGCTCTGTATGTAGTCCAT 57.945 37.500 0.00 0.00 37.58 3.41
2706 4779 7.182817 AGTTTTGCTCTGTATGTAGTCCATA 57.817 36.000 0.00 0.00 34.86 2.74
2707 4780 7.796054 AGTTTTGCTCTGTATGTAGTCCATAT 58.204 34.615 0.00 0.00 38.29 1.78
2708 4781 8.267894 AGTTTTGCTCTGTATGTAGTCCATATT 58.732 33.333 0.00 0.00 38.29 1.28
2709 4782 8.338259 GTTTTGCTCTGTATGTAGTCCATATTG 58.662 37.037 0.00 0.00 38.29 1.90
2710 4783 6.101650 TGCTCTGTATGTAGTCCATATTGG 57.898 41.667 0.00 0.00 38.29 3.16
2711 4784 5.838521 TGCTCTGTATGTAGTCCATATTGGA 59.161 40.000 0.00 0.00 45.98 3.53
2913 4996 3.133901 ACCGATGCACACAGAACCATATA 59.866 43.478 0.00 0.00 0.00 0.86
2942 5025 6.576313 GCAATGACATTTGCTGATATTAGTCG 59.424 38.462 0.00 0.00 46.66 4.18
3073 5156 2.093658 GCTGAGGTCCGTTAATCCTTCA 60.094 50.000 0.00 0.00 0.00 3.02
3119 5202 2.454336 ATACATCCAGGTGGTCTCGA 57.546 50.000 0.00 0.00 36.34 4.04
3121 5204 1.573108 ACATCCAGGTGGTCTCGATT 58.427 50.000 0.00 0.00 36.34 3.34
3272 5366 4.748102 AGTTGTGGTATACTTTGTGTGTCG 59.252 41.667 2.25 0.00 0.00 4.35
3324 5419 1.169577 AGGTGTTGTCGTTTGTTGCA 58.830 45.000 0.00 0.00 0.00 4.08
3397 5493 5.242069 TGTCATGTTCGTTCAATGTGTTT 57.758 34.783 0.00 0.00 0.00 2.83
3468 5572 3.120546 CGTTCTGAGGTTGTATGCTTGTG 60.121 47.826 0.00 0.00 0.00 3.33
3516 5624 1.527034 TGCAGTGAAAGATGCACTCC 58.473 50.000 0.00 0.00 46.97 3.85
3520 5628 2.483106 CAGTGAAAGATGCACTCCACAG 59.517 50.000 16.23 9.72 44.28 3.66
3557 5666 0.527565 GGATTGGCGACATTTGCTGT 59.472 50.000 0.00 0.00 42.32 4.40
3598 5707 3.062639 CCACTCGTTCGATCTTTGGATTG 59.937 47.826 0.00 0.00 35.26 2.67
3625 5734 3.441572 CCATCCTGTCATGTTTGGTCTTC 59.558 47.826 0.00 0.00 0.00 2.87
3641 5750 6.829229 TGGTCTTCGTTATCTTCTGTCTTA 57.171 37.500 0.00 0.00 0.00 2.10
3811 5947 6.049149 CCTTGTGTATCGATGAACAGGTTAT 58.951 40.000 8.54 0.00 0.00 1.89
3812 5948 6.018751 CCTTGTGTATCGATGAACAGGTTATG 60.019 42.308 8.54 0.00 0.00 1.90
3813 5949 6.215495 TGTGTATCGATGAACAGGTTATGA 57.785 37.500 8.54 0.00 0.00 2.15
3814 5950 6.816136 TGTGTATCGATGAACAGGTTATGAT 58.184 36.000 8.54 0.00 0.00 2.45
3815 5951 7.947282 TGTGTATCGATGAACAGGTTATGATA 58.053 34.615 8.54 0.00 0.00 2.15
3816 5952 8.417884 TGTGTATCGATGAACAGGTTATGATAA 58.582 33.333 8.54 0.00 0.00 1.75
3817 5953 8.700644 GTGTATCGATGAACAGGTTATGATAAC 58.299 37.037 8.54 6.79 0.00 1.89
3818 5954 7.870954 TGTATCGATGAACAGGTTATGATAACC 59.129 37.037 23.51 23.51 40.58 2.85
3879 6015 2.604046 GACTCCTGGTCATGCGTATT 57.396 50.000 0.00 0.00 43.94 1.89
3880 6016 2.474816 GACTCCTGGTCATGCGTATTC 58.525 52.381 0.00 0.00 43.94 1.75
3881 6017 2.101582 GACTCCTGGTCATGCGTATTCT 59.898 50.000 0.00 0.00 43.94 2.40
3894 6030 5.707242 TGCGTATTCTATCCCTTCTACTG 57.293 43.478 0.00 0.00 0.00 2.74
3895 6031 5.382616 TGCGTATTCTATCCCTTCTACTGA 58.617 41.667 0.00 0.00 0.00 3.41
3921 6057 0.250640 CCTGCCTGCAGAAGTGTCTT 60.251 55.000 20.29 0.00 46.30 3.01
3937 6073 5.437060 AGTGTCTTTTCTGTACATTGTGGT 58.563 37.500 0.00 0.00 0.00 4.16
3945 6081 1.076332 GTACATTGTGGTCGTGCTCC 58.924 55.000 0.00 0.00 0.00 4.70
3946 6082 0.036765 TACATTGTGGTCGTGCTCCC 60.037 55.000 0.00 0.00 0.00 4.30
3947 6083 2.040544 CATTGTGGTCGTGCTCCCC 61.041 63.158 0.00 0.00 0.00 4.81
4020 6159 2.622436 GGTCATTGTAGTCCTGCACTC 58.378 52.381 0.00 0.00 36.43 3.51
4039 6178 1.078497 TTCATGCTGCTACCGGTGG 60.078 57.895 19.93 17.17 0.00 4.61
4040 6179 1.836999 TTCATGCTGCTACCGGTGGT 61.837 55.000 19.93 0.00 40.16 4.16
4048 6188 0.101219 GCTACCGGTGGTAACGTAGG 59.899 60.000 19.93 0.00 37.76 3.18
4066 6206 6.835174 ACGTAGGAGTATGGTCTCTACATAA 58.165 40.000 0.00 0.00 33.03 1.90
4085 6225 0.253160 ATCCTGACAGGTAGGCCCAA 60.253 55.000 21.06 0.00 36.53 4.12
4106 6246 3.086600 CTGCCTCTCCACCCTCCC 61.087 72.222 0.00 0.00 0.00 4.30
4107 6247 4.741239 TGCCTCTCCACCCTCCCC 62.741 72.222 0.00 0.00 0.00 4.81
4108 6248 4.741239 GCCTCTCCACCCTCCCCA 62.741 72.222 0.00 0.00 0.00 4.96
4109 6249 2.366167 CCTCTCCACCCTCCCCAG 60.366 72.222 0.00 0.00 0.00 4.45
4110 6250 3.086600 CTCTCCACCCTCCCCAGC 61.087 72.222 0.00 0.00 0.00 4.85
4115 6255 4.394712 CACCCTCCCCAGCGACAC 62.395 72.222 0.00 0.00 0.00 3.67
4118 6258 4.003788 CCTCCCCAGCGACACGTT 62.004 66.667 0.00 0.00 0.00 3.99
4119 6259 2.432628 CTCCCCAGCGACACGTTC 60.433 66.667 0.00 0.00 0.00 3.95
4120 6260 3.220999 CTCCCCAGCGACACGTTCA 62.221 63.158 0.00 0.00 0.00 3.18
4121 6261 2.280524 CCCCAGCGACACGTTCAA 60.281 61.111 0.00 0.00 0.00 2.69
4122 6262 2.317609 CCCCAGCGACACGTTCAAG 61.318 63.158 0.00 0.00 0.00 3.02
4123 6263 2.551270 CCAGCGACACGTTCAAGC 59.449 61.111 0.00 0.00 0.00 4.01
4124 6264 1.956170 CCAGCGACACGTTCAAGCT 60.956 57.895 0.00 0.00 38.90 3.74
4125 6265 3.630204 AGCGACACGTTCAAGCTG 58.370 55.556 4.12 0.00 36.73 4.24
4126 6266 1.067416 AGCGACACGTTCAAGCTGA 59.933 52.632 4.12 0.00 36.73 4.26
4127 6267 0.319900 AGCGACACGTTCAAGCTGAT 60.320 50.000 4.12 0.00 36.73 2.90
4128 6268 0.093705 GCGACACGTTCAAGCTGATC 59.906 55.000 0.00 0.00 0.00 2.92
4129 6269 0.363512 CGACACGTTCAAGCTGATCG 59.636 55.000 12.19 12.19 43.12 3.69
4130 6270 1.698165 GACACGTTCAAGCTGATCGA 58.302 50.000 17.59 0.00 40.81 3.59
4131 6271 1.387084 GACACGTTCAAGCTGATCGAC 59.613 52.381 17.59 8.91 40.81 4.20
4132 6272 0.363512 CACGTTCAAGCTGATCGACG 59.636 55.000 17.59 12.60 40.81 5.12
4133 6273 0.039437 ACGTTCAAGCTGATCGACGT 60.039 50.000 17.59 13.09 40.81 4.34
4134 6274 0.635731 CGTTCAAGCTGATCGACGTC 59.364 55.000 5.18 5.18 40.81 4.34
4135 6275 1.698165 GTTCAAGCTGATCGACGTCA 58.302 50.000 17.16 3.13 0.00 4.35
4136 6276 1.387084 GTTCAAGCTGATCGACGTCAC 59.613 52.381 17.16 6.89 0.00 3.67
4137 6277 0.596082 TCAAGCTGATCGACGTCACA 59.404 50.000 17.16 11.14 0.00 3.58
4138 6278 0.987715 CAAGCTGATCGACGTCACAG 59.012 55.000 21.76 21.76 0.00 3.66
4139 6279 0.109086 AAGCTGATCGACGTCACAGG 60.109 55.000 24.85 8.66 0.00 4.00
4140 6280 1.213013 GCTGATCGACGTCACAGGT 59.787 57.895 24.85 5.64 0.00 4.00
4141 6281 1.073216 GCTGATCGACGTCACAGGTG 61.073 60.000 24.85 7.74 0.00 4.00
4142 6282 0.521735 CTGATCGACGTCACAGGTGA 59.478 55.000 17.16 3.57 37.24 4.02
4143 6283 0.955905 TGATCGACGTCACAGGTGAA 59.044 50.000 17.16 0.00 41.85 3.18
4144 6284 1.544246 TGATCGACGTCACAGGTGAAT 59.456 47.619 17.16 0.00 41.85 2.57
4145 6285 2.186076 GATCGACGTCACAGGTGAATC 58.814 52.381 17.16 4.53 41.85 2.52
4146 6286 0.242825 TCGACGTCACAGGTGAATCC 59.757 55.000 17.16 0.00 41.85 3.01
4188 6328 1.996191 GTTCAGACAAGGATCGCAGAC 59.004 52.381 0.00 0.00 42.51 3.51
4189 6329 1.550327 TCAGACAAGGATCGCAGACT 58.450 50.000 0.00 0.00 42.51 3.24
4190 6330 1.474478 TCAGACAAGGATCGCAGACTC 59.526 52.381 0.00 0.00 42.51 3.36
4191 6331 0.453793 AGACAAGGATCGCAGACTCG 59.546 55.000 0.00 0.00 42.51 4.18
4192 6332 0.452184 GACAAGGATCGCAGACTCGA 59.548 55.000 0.58 0.58 42.51 4.04
4201 6341 1.433053 CGCAGACTCGATCTCGGACT 61.433 60.000 0.00 0.00 40.29 3.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 5.692115 AAGACCATGAAACCTTGGTTTTT 57.308 34.783 17.54 7.36 46.14 1.94
7 8 5.692115 AAAGACCATGAAACCTTGGTTTT 57.308 34.783 17.54 3.06 46.14 2.43
8 9 5.692115 AAAAGACCATGAAACCTTGGTTT 57.308 34.783 16.63 16.63 46.14 3.27
9 10 6.994421 ATAAAAGACCATGAAACCTTGGTT 57.006 33.333 0.00 0.00 46.14 3.67
11 12 7.124147 ACCATATAAAAGACCATGAAACCTTGG 59.876 37.037 0.00 0.00 39.02 3.61
12 13 8.066612 ACCATATAAAAGACCATGAAACCTTG 57.933 34.615 0.00 0.00 0.00 3.61
13 14 8.116026 AGACCATATAAAAGACCATGAAACCTT 58.884 33.333 0.00 0.00 0.00 3.50
14 15 7.643123 AGACCATATAAAAGACCATGAAACCT 58.357 34.615 0.00 0.00 0.00 3.50
15 16 7.881775 AGACCATATAAAAGACCATGAAACC 57.118 36.000 0.00 0.00 0.00 3.27
16 17 9.391006 TGTAGACCATATAAAAGACCATGAAAC 57.609 33.333 0.00 0.00 0.00 2.78
18 19 9.559732 CATGTAGACCATATAAAAGACCATGAA 57.440 33.333 0.00 0.00 30.71 2.57
19 20 7.661437 GCATGTAGACCATATAAAAGACCATGA 59.339 37.037 0.00 0.00 30.71 3.07
20 21 7.360353 CGCATGTAGACCATATAAAAGACCATG 60.360 40.741 0.00 0.00 30.71 3.66
21 22 6.650807 CGCATGTAGACCATATAAAAGACCAT 59.349 38.462 0.00 0.00 30.71 3.55
22 23 5.989168 CGCATGTAGACCATATAAAAGACCA 59.011 40.000 0.00 0.00 30.71 4.02
23 24 5.107065 GCGCATGTAGACCATATAAAAGACC 60.107 44.000 0.30 0.00 30.71 3.85
24 25 5.465390 TGCGCATGTAGACCATATAAAAGAC 59.535 40.000 5.66 0.00 30.71 3.01
25 26 5.606505 TGCGCATGTAGACCATATAAAAGA 58.393 37.500 5.66 0.00 30.71 2.52
26 27 5.922739 TGCGCATGTAGACCATATAAAAG 57.077 39.130 5.66 0.00 30.71 2.27
27 28 6.685527 TTTGCGCATGTAGACCATATAAAA 57.314 33.333 12.75 0.00 30.71 1.52
28 29 6.347321 CGATTTGCGCATGTAGACCATATAAA 60.347 38.462 12.75 0.00 30.71 1.40
29 30 5.120053 CGATTTGCGCATGTAGACCATATAA 59.880 40.000 12.75 0.00 30.71 0.98
30 31 4.625311 CGATTTGCGCATGTAGACCATATA 59.375 41.667 12.75 0.00 30.71 0.86
31 32 3.433274 CGATTTGCGCATGTAGACCATAT 59.567 43.478 12.75 0.00 30.71 1.78
32 33 2.799978 CGATTTGCGCATGTAGACCATA 59.200 45.455 12.75 0.00 30.71 2.74
33 34 1.599071 CGATTTGCGCATGTAGACCAT 59.401 47.619 12.75 0.00 0.00 3.55
34 35 1.006086 CGATTTGCGCATGTAGACCA 58.994 50.000 12.75 0.00 0.00 4.02
35 36 1.286501 TCGATTTGCGCATGTAGACC 58.713 50.000 12.75 0.00 40.61 3.85
36 37 2.285834 CCTTCGATTTGCGCATGTAGAC 60.286 50.000 12.75 0.00 40.61 2.59
37 38 1.933181 CCTTCGATTTGCGCATGTAGA 59.067 47.619 12.75 6.06 40.61 2.59
38 39 1.003545 CCCTTCGATTTGCGCATGTAG 60.004 52.381 12.75 3.38 40.61 2.74
39 40 1.013596 CCCTTCGATTTGCGCATGTA 58.986 50.000 12.75 0.00 40.61 2.29
40 41 0.960364 ACCCTTCGATTTGCGCATGT 60.960 50.000 12.75 1.90 40.61 3.21
41 42 0.171007 AACCCTTCGATTTGCGCATG 59.829 50.000 12.75 1.43 40.61 4.06
42 43 0.887933 AAACCCTTCGATTTGCGCAT 59.112 45.000 12.75 0.00 40.61 4.73
43 44 1.524848 TAAACCCTTCGATTTGCGCA 58.475 45.000 5.66 5.66 40.61 6.09
44 45 2.160813 TCTTAAACCCTTCGATTTGCGC 59.839 45.455 0.00 0.00 40.61 6.09
45 46 4.413495 TTCTTAAACCCTTCGATTTGCG 57.587 40.909 0.00 0.00 42.69 4.85
46 47 8.807581 CATTTATTCTTAAACCCTTCGATTTGC 58.192 33.333 0.00 0.00 30.33 3.68
47 48 8.807581 GCATTTATTCTTAAACCCTTCGATTTG 58.192 33.333 0.00 0.00 30.33 2.32
48 49 8.527810 TGCATTTATTCTTAAACCCTTCGATTT 58.472 29.630 0.00 0.00 30.33 2.17
49 50 8.062065 TGCATTTATTCTTAAACCCTTCGATT 57.938 30.769 0.00 0.00 30.33 3.34
50 51 7.639113 TGCATTTATTCTTAAACCCTTCGAT 57.361 32.000 0.00 0.00 30.33 3.59
51 52 7.455641 TTGCATTTATTCTTAAACCCTTCGA 57.544 32.000 0.00 0.00 30.33 3.71
52 53 6.253512 GCTTGCATTTATTCTTAAACCCTTCG 59.746 38.462 0.00 0.00 30.33 3.79
53 54 6.535150 GGCTTGCATTTATTCTTAAACCCTTC 59.465 38.462 0.00 0.00 30.33 3.46
54 55 6.213397 AGGCTTGCATTTATTCTTAAACCCTT 59.787 34.615 0.00 0.00 30.33 3.95
55 56 5.721480 AGGCTTGCATTTATTCTTAAACCCT 59.279 36.000 0.00 0.00 30.33 4.34
56 57 5.977635 AGGCTTGCATTTATTCTTAAACCC 58.022 37.500 0.00 0.00 30.33 4.11
57 58 7.602265 TGAAAGGCTTGCATTTATTCTTAAACC 59.398 33.333 3.04 0.00 30.33 3.27
58 59 8.435430 GTGAAAGGCTTGCATTTATTCTTAAAC 58.565 33.333 11.93 0.00 30.33 2.01
59 60 8.367156 AGTGAAAGGCTTGCATTTATTCTTAAA 58.633 29.630 11.93 0.00 0.00 1.52
60 61 7.895759 AGTGAAAGGCTTGCATTTATTCTTAA 58.104 30.769 11.93 0.00 0.00 1.85
61 62 7.466746 AGTGAAAGGCTTGCATTTATTCTTA 57.533 32.000 11.93 0.00 0.00 2.10
62 63 6.350629 AGTGAAAGGCTTGCATTTATTCTT 57.649 33.333 11.93 0.00 0.00 2.52
63 64 5.990120 AGTGAAAGGCTTGCATTTATTCT 57.010 34.783 11.93 0.00 0.00 2.40
64 65 6.856895 ACTAGTGAAAGGCTTGCATTTATTC 58.143 36.000 11.93 0.00 0.00 1.75
65 66 6.840780 ACTAGTGAAAGGCTTGCATTTATT 57.159 33.333 11.93 0.00 0.00 1.40
66 67 7.938140 TTACTAGTGAAAGGCTTGCATTTAT 57.062 32.000 11.93 1.65 0.00 1.40
67 68 7.753309 TTTACTAGTGAAAGGCTTGCATTTA 57.247 32.000 11.93 6.71 0.00 1.40
68 69 6.648879 TTTACTAGTGAAAGGCTTGCATTT 57.351 33.333 11.93 4.90 0.00 2.32
69 70 6.840780 ATTTACTAGTGAAAGGCTTGCATT 57.159 33.333 11.93 10.03 0.00 3.56
70 71 7.995488 AGATATTTACTAGTGAAAGGCTTGCAT 59.005 33.333 11.93 3.45 0.00 3.96
71 72 7.338710 AGATATTTACTAGTGAAAGGCTTGCA 58.661 34.615 3.04 3.04 0.00 4.08
72 73 7.495934 TGAGATATTTACTAGTGAAAGGCTTGC 59.504 37.037 5.39 0.00 0.00 4.01
73 74 8.821894 GTGAGATATTTACTAGTGAAAGGCTTG 58.178 37.037 5.39 0.00 0.00 4.01
74 75 7.988028 GGTGAGATATTTACTAGTGAAAGGCTT 59.012 37.037 5.39 0.00 0.00 4.35
75 76 7.345914 AGGTGAGATATTTACTAGTGAAAGGCT 59.654 37.037 5.39 2.55 0.00 4.58
76 77 7.501844 AGGTGAGATATTTACTAGTGAAAGGC 58.498 38.462 5.39 0.00 0.00 4.35
77 78 8.145122 GGAGGTGAGATATTTACTAGTGAAAGG 58.855 40.741 5.39 0.00 0.00 3.11
78 79 8.696374 TGGAGGTGAGATATTTACTAGTGAAAG 58.304 37.037 5.39 0.00 0.00 2.62
79 80 8.603898 TGGAGGTGAGATATTTACTAGTGAAA 57.396 34.615 5.39 3.04 0.00 2.69
80 81 8.603898 TTGGAGGTGAGATATTTACTAGTGAA 57.396 34.615 5.39 3.66 0.00 3.18
81 82 8.783660 ATTGGAGGTGAGATATTTACTAGTGA 57.216 34.615 5.39 0.00 0.00 3.41
82 83 7.810282 CGATTGGAGGTGAGATATTTACTAGTG 59.190 40.741 5.39 0.00 0.00 2.74
83 84 7.724506 TCGATTGGAGGTGAGATATTTACTAGT 59.275 37.037 0.00 0.00 0.00 2.57
84 85 8.112016 TCGATTGGAGGTGAGATATTTACTAG 57.888 38.462 0.00 0.00 0.00 2.57
85 86 8.473358 TTCGATTGGAGGTGAGATATTTACTA 57.527 34.615 0.00 0.00 0.00 1.82
86 87 6.978674 TCGATTGGAGGTGAGATATTTACT 57.021 37.500 0.00 0.00 0.00 2.24
87 88 6.647067 CCTTCGATTGGAGGTGAGATATTTAC 59.353 42.308 0.00 0.00 0.00 2.01
88 89 6.239600 CCCTTCGATTGGAGGTGAGATATTTA 60.240 42.308 6.54 0.00 0.00 1.40
89 90 5.455326 CCCTTCGATTGGAGGTGAGATATTT 60.455 44.000 6.54 0.00 0.00 1.40
90 91 4.040952 CCCTTCGATTGGAGGTGAGATATT 59.959 45.833 6.54 0.00 0.00 1.28
91 92 3.580458 CCCTTCGATTGGAGGTGAGATAT 59.420 47.826 6.54 0.00 0.00 1.63
92 93 2.965831 CCCTTCGATTGGAGGTGAGATA 59.034 50.000 6.54 0.00 0.00 1.98
93 94 1.765314 CCCTTCGATTGGAGGTGAGAT 59.235 52.381 6.54 0.00 0.00 2.75
94 95 1.195115 CCCTTCGATTGGAGGTGAGA 58.805 55.000 6.54 0.00 0.00 3.27
95 96 0.905357 ACCCTTCGATTGGAGGTGAG 59.095 55.000 6.54 0.00 0.00 3.51
96 97 1.358152 AACCCTTCGATTGGAGGTGA 58.642 50.000 6.54 0.00 0.00 4.02
97 98 2.200373 AAACCCTTCGATTGGAGGTG 57.800 50.000 6.54 0.73 0.00 4.00
98 99 3.585732 TCTTAAACCCTTCGATTGGAGGT 59.414 43.478 6.54 0.00 0.00 3.85
99 100 4.216411 TCTTAAACCCTTCGATTGGAGG 57.784 45.455 0.00 0.00 0.00 4.30
100 101 5.066505 CCATTCTTAAACCCTTCGATTGGAG 59.933 44.000 7.67 0.00 30.59 3.86
101 102 4.947388 CCATTCTTAAACCCTTCGATTGGA 59.053 41.667 7.67 0.00 30.59 3.53
102 103 4.947388 TCCATTCTTAAACCCTTCGATTGG 59.053 41.667 0.00 0.00 0.00 3.16
103 104 5.447279 CGTCCATTCTTAAACCCTTCGATTG 60.447 44.000 0.00 0.00 0.00 2.67
104 105 4.634443 CGTCCATTCTTAAACCCTTCGATT 59.366 41.667 0.00 0.00 0.00 3.34
105 106 4.189231 CGTCCATTCTTAAACCCTTCGAT 58.811 43.478 0.00 0.00 0.00 3.59
106 107 3.592059 CGTCCATTCTTAAACCCTTCGA 58.408 45.455 0.00 0.00 0.00 3.71
107 108 2.095372 GCGTCCATTCTTAAACCCTTCG 59.905 50.000 0.00 0.00 0.00 3.79
108 109 3.078837 TGCGTCCATTCTTAAACCCTTC 58.921 45.455 0.00 0.00 0.00 3.46
109 110 3.081804 CTGCGTCCATTCTTAAACCCTT 58.918 45.455 0.00 0.00 0.00 3.95
110 111 2.618045 CCTGCGTCCATTCTTAAACCCT 60.618 50.000 0.00 0.00 0.00 4.34
111 112 1.743394 CCTGCGTCCATTCTTAAACCC 59.257 52.381 0.00 0.00 0.00 4.11
112 113 1.132453 GCCTGCGTCCATTCTTAAACC 59.868 52.381 0.00 0.00 0.00 3.27
113 114 1.132453 GGCCTGCGTCCATTCTTAAAC 59.868 52.381 0.00 0.00 0.00 2.01
114 115 1.004277 AGGCCTGCGTCCATTCTTAAA 59.996 47.619 3.11 0.00 0.00 1.52
115 116 0.618458 AGGCCTGCGTCCATTCTTAA 59.382 50.000 3.11 0.00 0.00 1.85
116 117 0.618458 AAGGCCTGCGTCCATTCTTA 59.382 50.000 5.69 0.00 0.00 2.10
117 118 0.251341 AAAGGCCTGCGTCCATTCTT 60.251 50.000 5.69 0.00 0.00 2.52
118 119 0.678048 GAAAGGCCTGCGTCCATTCT 60.678 55.000 5.69 0.00 30.88 2.40
119 120 0.960364 TGAAAGGCCTGCGTCCATTC 60.960 55.000 5.69 4.88 33.32 2.67
120 121 0.323725 ATGAAAGGCCTGCGTCCATT 60.324 50.000 5.69 0.00 0.00 3.16
121 122 1.033746 CATGAAAGGCCTGCGTCCAT 61.034 55.000 5.69 2.73 0.00 3.41
122 123 1.675310 CATGAAAGGCCTGCGTCCA 60.675 57.895 5.69 0.00 0.00 4.02
123 124 2.409870 CCATGAAAGGCCTGCGTCC 61.410 63.158 5.69 0.00 0.00 4.79
124 125 2.409870 CCCATGAAAGGCCTGCGTC 61.410 63.158 5.69 5.05 0.00 5.19
125 126 2.361610 CCCATGAAAGGCCTGCGT 60.362 61.111 5.69 0.00 0.00 5.24
126 127 2.361610 ACCCATGAAAGGCCTGCG 60.362 61.111 5.69 0.00 0.00 5.18
127 128 0.899717 TTGACCCATGAAAGGCCTGC 60.900 55.000 5.69 1.56 0.00 4.85
128 129 1.856629 ATTGACCCATGAAAGGCCTG 58.143 50.000 5.69 0.00 0.00 4.85
129 130 3.756082 TTATTGACCCATGAAAGGCCT 57.244 42.857 0.00 0.00 0.00 5.19
130 131 5.118286 CAATTTATTGACCCATGAAAGGCC 58.882 41.667 0.00 0.00 40.14 5.19
131 132 5.733676 ACAATTTATTGACCCATGAAAGGC 58.266 37.500 9.32 0.00 40.14 4.35
132 133 7.385267 TGAACAATTTATTGACCCATGAAAGG 58.615 34.615 9.32 0.00 40.14 3.11
133 134 8.830201 TTGAACAATTTATTGACCCATGAAAG 57.170 30.769 9.32 0.00 40.14 2.62
134 135 9.618890 TTTTGAACAATTTATTGACCCATGAAA 57.381 25.926 9.32 0.00 40.14 2.69
135 136 9.618890 TTTTTGAACAATTTATTGACCCATGAA 57.381 25.926 9.32 0.00 40.14 2.57
136 137 9.790344 ATTTTTGAACAATTTATTGACCCATGA 57.210 25.926 9.32 0.00 40.14 3.07
185 186 9.754382 GTGAATGCACTTATGATTTATTGGATT 57.246 29.630 0.00 0.00 41.84 3.01
217 218 9.739276 TCCATTTAAGCTGAATTTTCTCTAGAA 57.261 29.630 0.00 0.00 0.00 2.10
218 219 9.388506 CTCCATTTAAGCTGAATTTTCTCTAGA 57.611 33.333 0.00 0.00 0.00 2.43
219 220 8.127954 GCTCCATTTAAGCTGAATTTTCTCTAG 58.872 37.037 0.00 0.00 36.80 2.43
220 221 7.611467 TGCTCCATTTAAGCTGAATTTTCTCTA 59.389 33.333 0.00 0.00 40.50 2.43
221 222 6.435277 TGCTCCATTTAAGCTGAATTTTCTCT 59.565 34.615 0.00 0.00 40.50 3.10
222 223 6.624423 TGCTCCATTTAAGCTGAATTTTCTC 58.376 36.000 0.00 0.00 40.50 2.87
223 224 6.594788 TGCTCCATTTAAGCTGAATTTTCT 57.405 33.333 0.00 0.00 40.50 2.52
224 225 6.312180 CCTTGCTCCATTTAAGCTGAATTTTC 59.688 38.462 0.00 0.00 40.50 2.29
225 226 6.168389 CCTTGCTCCATTTAAGCTGAATTTT 58.832 36.000 0.00 0.00 40.50 1.82
226 227 5.337813 CCCTTGCTCCATTTAAGCTGAATTT 60.338 40.000 0.00 0.00 40.50 1.82
227 228 4.161001 CCCTTGCTCCATTTAAGCTGAATT 59.839 41.667 0.00 0.00 40.50 2.17
228 229 3.703052 CCCTTGCTCCATTTAAGCTGAAT 59.297 43.478 0.00 0.00 40.50 2.57
229 230 3.091545 CCCTTGCTCCATTTAAGCTGAA 58.908 45.455 0.00 0.00 40.50 3.02
230 231 2.308570 TCCCTTGCTCCATTTAAGCTGA 59.691 45.455 0.00 0.00 40.50 4.26
231 232 2.726821 TCCCTTGCTCCATTTAAGCTG 58.273 47.619 0.00 0.00 40.50 4.24
232 233 3.677156 ATCCCTTGCTCCATTTAAGCT 57.323 42.857 0.00 0.00 40.50 3.74
233 234 4.050852 CAATCCCTTGCTCCATTTAAGC 57.949 45.455 0.00 0.00 40.26 3.09
245 246 2.289002 GTCAATAGCTCGCAATCCCTTG 59.711 50.000 0.00 0.00 35.36 3.61
246 247 2.092968 TGTCAATAGCTCGCAATCCCTT 60.093 45.455 0.00 0.00 0.00 3.95
247 248 1.486310 TGTCAATAGCTCGCAATCCCT 59.514 47.619 0.00 0.00 0.00 4.20
248 249 1.953559 TGTCAATAGCTCGCAATCCC 58.046 50.000 0.00 0.00 0.00 3.85
249 250 4.274459 AGAAATGTCAATAGCTCGCAATCC 59.726 41.667 0.00 0.00 0.00 3.01
250 251 5.415415 AGAAATGTCAATAGCTCGCAATC 57.585 39.130 0.00 0.00 0.00 2.67
251 252 6.925610 TTAGAAATGTCAATAGCTCGCAAT 57.074 33.333 0.00 0.00 0.00 3.56
252 253 6.925610 ATTAGAAATGTCAATAGCTCGCAA 57.074 33.333 0.00 0.00 0.00 4.85
253 254 6.238456 CCAATTAGAAATGTCAATAGCTCGCA 60.238 38.462 0.00 0.00 0.00 5.10
254 255 6.138761 CCAATTAGAAATGTCAATAGCTCGC 58.861 40.000 0.00 0.00 0.00 5.03
255 256 7.251704 ACCAATTAGAAATGTCAATAGCTCG 57.748 36.000 0.00 0.00 0.00 5.03
256 257 7.433425 GCAACCAATTAGAAATGTCAATAGCTC 59.567 37.037 0.00 0.00 0.00 4.09
257 258 7.123247 AGCAACCAATTAGAAATGTCAATAGCT 59.877 33.333 0.00 0.00 0.00 3.32
258 259 7.221452 CAGCAACCAATTAGAAATGTCAATAGC 59.779 37.037 0.00 0.00 0.00 2.97
259 260 8.461222 TCAGCAACCAATTAGAAATGTCAATAG 58.539 33.333 0.00 0.00 0.00 1.73
260 261 8.347004 TCAGCAACCAATTAGAAATGTCAATA 57.653 30.769 0.00 0.00 0.00 1.90
261 262 7.230849 TCAGCAACCAATTAGAAATGTCAAT 57.769 32.000 0.00 0.00 0.00 2.57
262 263 6.647334 TCAGCAACCAATTAGAAATGTCAA 57.353 33.333 0.00 0.00 0.00 3.18
263 264 6.209192 ACATCAGCAACCAATTAGAAATGTCA 59.791 34.615 0.00 0.00 0.00 3.58
264 265 6.529125 CACATCAGCAACCAATTAGAAATGTC 59.471 38.462 0.00 0.00 0.00 3.06
265 266 6.392354 CACATCAGCAACCAATTAGAAATGT 58.608 36.000 0.00 0.00 0.00 2.71
266 267 5.808540 CCACATCAGCAACCAATTAGAAATG 59.191 40.000 0.00 0.00 0.00 2.32
267 268 5.625197 GCCACATCAGCAACCAATTAGAAAT 60.625 40.000 0.00 0.00 0.00 2.17
268 269 4.321899 GCCACATCAGCAACCAATTAGAAA 60.322 41.667 0.00 0.00 0.00 2.52
269 270 3.193267 GCCACATCAGCAACCAATTAGAA 59.807 43.478 0.00 0.00 0.00 2.10
270 271 2.754552 GCCACATCAGCAACCAATTAGA 59.245 45.455 0.00 0.00 0.00 2.10
271 272 2.159198 GGCCACATCAGCAACCAATTAG 60.159 50.000 0.00 0.00 0.00 1.73
272 273 1.824230 GGCCACATCAGCAACCAATTA 59.176 47.619 0.00 0.00 0.00 1.40
273 274 0.609662 GGCCACATCAGCAACCAATT 59.390 50.000 0.00 0.00 0.00 2.32
274 275 1.597797 CGGCCACATCAGCAACCAAT 61.598 55.000 2.24 0.00 0.00 3.16
275 276 2.267351 CGGCCACATCAGCAACCAA 61.267 57.895 2.24 0.00 0.00 3.67
276 277 2.672651 CGGCCACATCAGCAACCA 60.673 61.111 2.24 0.00 0.00 3.67
277 278 3.443045 CCGGCCACATCAGCAACC 61.443 66.667 2.24 0.00 0.00 3.77
278 279 1.315257 ATTCCGGCCACATCAGCAAC 61.315 55.000 2.24 0.00 0.00 4.17
279 280 0.611618 AATTCCGGCCACATCAGCAA 60.612 50.000 2.24 0.00 0.00 3.91
280 281 0.611618 AAATTCCGGCCACATCAGCA 60.612 50.000 2.24 0.00 0.00 4.41
281 282 1.388547 TAAATTCCGGCCACATCAGC 58.611 50.000 2.24 0.00 0.00 4.26
282 283 4.654091 AAATAAATTCCGGCCACATCAG 57.346 40.909 2.24 0.00 0.00 2.90
283 284 5.413309 AAAAATAAATTCCGGCCACATCA 57.587 34.783 2.24 0.00 0.00 3.07
303 304 1.135257 CAAGTGCACCGGTGACAAAAA 60.135 47.619 38.30 12.22 0.00 1.94
304 305 0.453793 CAAGTGCACCGGTGACAAAA 59.546 50.000 38.30 14.06 0.00 2.44
305 306 1.999071 GCAAGTGCACCGGTGACAAA 61.999 55.000 38.30 16.68 41.59 2.83
306 307 2.477176 GCAAGTGCACCGGTGACAA 61.477 57.895 38.30 19.34 41.59 3.18
307 308 2.899838 GCAAGTGCACCGGTGACA 60.900 61.111 38.30 29.34 41.59 3.58
317 318 1.363807 GGGTCCAGTTTGCAAGTGC 59.636 57.895 0.00 0.00 42.50 4.40
318 319 0.670162 CTGGGTCCAGTTTGCAAGTG 59.330 55.000 8.78 1.32 39.10 3.16
319 320 3.116091 CTGGGTCCAGTTTGCAAGT 57.884 52.632 8.78 0.00 39.10 3.16
329 330 2.441375 TGATTTCTGACAACTGGGTCCA 59.559 45.455 0.00 0.00 36.97 4.02
330 331 3.140325 TGATTTCTGACAACTGGGTCC 57.860 47.619 0.00 0.00 36.97 4.46
331 332 4.074970 ACATGATTTCTGACAACTGGGTC 58.925 43.478 0.00 0.00 38.29 4.46
332 333 4.074970 GACATGATTTCTGACAACTGGGT 58.925 43.478 0.00 0.00 0.00 4.51
333 334 4.074259 TGACATGATTTCTGACAACTGGG 58.926 43.478 0.00 0.00 0.00 4.45
334 335 5.008911 TGTTGACATGATTTCTGACAACTGG 59.991 40.000 15.62 0.00 44.22 4.00
335 336 5.911280 GTGTTGACATGATTTCTGACAACTG 59.089 40.000 15.62 0.00 44.22 3.16
336 337 5.589855 TGTGTTGACATGATTTCTGACAACT 59.410 36.000 15.62 0.00 44.22 3.16
337 338 5.682862 GTGTGTTGACATGATTTCTGACAAC 59.317 40.000 0.00 10.29 44.18 3.32
338 339 5.503846 CGTGTGTTGACATGATTTCTGACAA 60.504 40.000 0.00 0.00 41.05 3.18
339 340 4.024977 CGTGTGTTGACATGATTTCTGACA 60.025 41.667 0.00 0.00 41.05 3.58
340 341 4.024893 ACGTGTGTTGACATGATTTCTGAC 60.025 41.667 0.00 0.00 41.05 3.51
341 342 4.126437 ACGTGTGTTGACATGATTTCTGA 58.874 39.130 0.00 0.00 41.05 3.27
342 343 4.472691 ACGTGTGTTGACATGATTTCTG 57.527 40.909 0.00 0.00 41.05 3.02
343 344 6.427150 GTTTACGTGTGTTGACATGATTTCT 58.573 36.000 0.00 0.00 41.05 2.52
344 345 5.335949 CGTTTACGTGTGTTGACATGATTTC 59.664 40.000 0.00 0.00 41.05 2.17
345 346 5.006844 TCGTTTACGTGTGTTGACATGATTT 59.993 36.000 0.00 0.00 41.05 2.17
346 347 4.508492 TCGTTTACGTGTGTTGACATGATT 59.492 37.500 0.00 0.00 41.05 2.57
347 348 4.052608 TCGTTTACGTGTGTTGACATGAT 58.947 39.130 0.00 0.00 41.05 2.45
348 349 3.445857 TCGTTTACGTGTGTTGACATGA 58.554 40.909 0.00 0.00 41.05 3.07
349 350 3.845231 TCGTTTACGTGTGTTGACATG 57.155 42.857 0.00 0.00 43.74 3.21
350 351 3.185594 CCATCGTTTACGTGTGTTGACAT 59.814 43.478 0.00 0.00 40.80 3.06
351 352 2.540516 CCATCGTTTACGTGTGTTGACA 59.459 45.455 0.00 0.00 40.80 3.58
352 353 2.796031 TCCATCGTTTACGTGTGTTGAC 59.204 45.455 0.00 0.00 40.80 3.18
353 354 3.095102 TCCATCGTTTACGTGTGTTGA 57.905 42.857 0.00 0.00 40.80 3.18
354 355 4.398549 AATCCATCGTTTACGTGTGTTG 57.601 40.909 0.00 0.00 40.80 3.33
355 356 5.346822 GTCTAATCCATCGTTTACGTGTGTT 59.653 40.000 0.00 1.54 40.80 3.32
356 357 4.860907 GTCTAATCCATCGTTTACGTGTGT 59.139 41.667 0.00 0.00 40.80 3.72
357 358 4.266976 GGTCTAATCCATCGTTTACGTGTG 59.733 45.833 0.00 3.36 40.80 3.82
358 359 4.159135 AGGTCTAATCCATCGTTTACGTGT 59.841 41.667 0.00 0.00 40.80 4.49
359 360 4.679662 AGGTCTAATCCATCGTTTACGTG 58.320 43.478 0.00 0.85 40.80 4.49
360 361 4.996788 AGGTCTAATCCATCGTTTACGT 57.003 40.909 1.88 0.00 40.80 3.57
361 362 6.069684 ACTAGGTCTAATCCATCGTTTACG 57.930 41.667 0.00 0.00 41.45 3.18
362 363 6.200475 GCAACTAGGTCTAATCCATCGTTTAC 59.800 42.308 0.00 0.00 0.00 2.01
363 364 6.127281 TGCAACTAGGTCTAATCCATCGTTTA 60.127 38.462 0.00 0.00 0.00 2.01
364 365 5.116882 GCAACTAGGTCTAATCCATCGTTT 58.883 41.667 0.00 0.00 0.00 3.60
365 366 4.161565 TGCAACTAGGTCTAATCCATCGTT 59.838 41.667 0.00 0.00 0.00 3.85
366 367 3.704566 TGCAACTAGGTCTAATCCATCGT 59.295 43.478 0.00 0.00 0.00 3.73
367 368 4.322080 TGCAACTAGGTCTAATCCATCG 57.678 45.455 0.00 0.00 0.00 3.84
368 369 4.508124 CGTTGCAACTAGGTCTAATCCATC 59.492 45.833 26.09 0.00 0.00 3.51
369 370 4.161565 TCGTTGCAACTAGGTCTAATCCAT 59.838 41.667 26.09 0.00 0.00 3.41
370 371 3.512329 TCGTTGCAACTAGGTCTAATCCA 59.488 43.478 26.09 0.00 0.00 3.41
371 372 4.119442 TCGTTGCAACTAGGTCTAATCC 57.881 45.455 26.09 0.00 0.00 3.01
372 373 6.663944 AATTCGTTGCAACTAGGTCTAATC 57.336 37.500 26.09 0.00 0.00 1.75
373 374 6.537660 GGTAATTCGTTGCAACTAGGTCTAAT 59.462 38.462 26.09 11.32 0.00 1.73
374 375 5.870978 GGTAATTCGTTGCAACTAGGTCTAA 59.129 40.000 26.09 9.73 0.00 2.10
375 376 5.413499 GGTAATTCGTTGCAACTAGGTCTA 58.587 41.667 26.09 8.16 0.00 2.59
376 377 4.251268 GGTAATTCGTTGCAACTAGGTCT 58.749 43.478 26.09 9.06 0.00 3.85
377 378 3.061697 CGGTAATTCGTTGCAACTAGGTC 59.938 47.826 26.09 12.16 0.00 3.85
378 379 2.997986 CGGTAATTCGTTGCAACTAGGT 59.002 45.455 26.09 12.04 0.00 3.08
379 380 3.255725 TCGGTAATTCGTTGCAACTAGG 58.744 45.455 26.09 11.91 0.00 3.02
380 381 4.914312 TTCGGTAATTCGTTGCAACTAG 57.086 40.909 26.09 12.63 0.00 2.57
381 382 8.705134 CATATATTCGGTAATTCGTTGCAACTA 58.295 33.333 26.09 14.00 0.00 2.24
382 383 7.439955 TCATATATTCGGTAATTCGTTGCAACT 59.560 33.333 26.09 10.91 0.00 3.16
383 384 7.569297 TCATATATTCGGTAATTCGTTGCAAC 58.431 34.615 19.89 19.89 0.00 4.17
384 385 7.716768 TCATATATTCGGTAATTCGTTGCAA 57.283 32.000 0.00 0.00 0.00 4.08
385 386 7.386573 ACATCATATATTCGGTAATTCGTTGCA 59.613 33.333 0.00 0.00 0.00 4.08
386 387 7.739295 ACATCATATATTCGGTAATTCGTTGC 58.261 34.615 0.00 0.00 0.00 4.17
392 393 9.677567 GCACAAAACATCATATATTCGGTAATT 57.322 29.630 0.00 0.00 0.00 1.40
393 394 8.845227 TGCACAAAACATCATATATTCGGTAAT 58.155 29.630 0.00 0.00 0.00 1.89
394 395 8.214721 TGCACAAAACATCATATATTCGGTAA 57.785 30.769 0.00 0.00 0.00 2.85
395 396 7.793927 TGCACAAAACATCATATATTCGGTA 57.206 32.000 0.00 0.00 0.00 4.02
396 397 6.691754 TGCACAAAACATCATATATTCGGT 57.308 33.333 0.00 0.00 0.00 4.69
397 398 6.971756 TGTTGCACAAAACATCATATATTCGG 59.028 34.615 0.00 0.00 35.16 4.30
398 399 7.967771 TGTTGCACAAAACATCATATATTCG 57.032 32.000 0.00 0.00 35.16 3.34
413 414 5.574891 AGTGTTACAGATTTGTTGCACAA 57.425 34.783 18.32 0.00 40.27 3.33
414 415 5.277779 GCTAGTGTTACAGATTTGTTGCACA 60.278 40.000 18.32 8.07 40.27 4.57
415 416 5.147162 GCTAGTGTTACAGATTTGTTGCAC 58.853 41.667 12.15 12.15 39.19 4.57
416 417 4.819088 TGCTAGTGTTACAGATTTGTTGCA 59.181 37.500 0.00 0.00 38.76 4.08
417 418 5.356882 TGCTAGTGTTACAGATTTGTTGC 57.643 39.130 0.00 0.00 38.76 4.17
418 419 7.132694 TGATGCTAGTGTTACAGATTTGTTG 57.867 36.000 0.00 0.00 38.76 3.33
419 420 7.744087 TTGATGCTAGTGTTACAGATTTGTT 57.256 32.000 0.00 0.00 38.76 2.83
420 421 7.744087 TTTGATGCTAGTGTTACAGATTTGT 57.256 32.000 0.00 0.00 41.39 2.83
421 422 9.630098 ATTTTTGATGCTAGTGTTACAGATTTG 57.370 29.630 0.00 0.00 0.00 2.32
424 425 9.113838 CCTATTTTTGATGCTAGTGTTACAGAT 57.886 33.333 0.00 0.00 0.00 2.90
425 426 8.100791 ACCTATTTTTGATGCTAGTGTTACAGA 58.899 33.333 0.00 0.00 0.00 3.41
426 427 8.177663 CACCTATTTTTGATGCTAGTGTTACAG 58.822 37.037 0.00 0.00 0.00 2.74
427 428 7.120579 CCACCTATTTTTGATGCTAGTGTTACA 59.879 37.037 0.00 0.00 0.00 2.41
428 429 7.472543 CCACCTATTTTTGATGCTAGTGTTAC 58.527 38.462 0.00 0.00 0.00 2.50
429 430 6.094881 GCCACCTATTTTTGATGCTAGTGTTA 59.905 38.462 0.00 0.00 0.00 2.41
430 431 5.105756 GCCACCTATTTTTGATGCTAGTGTT 60.106 40.000 0.00 0.00 0.00 3.32
431 432 4.399303 GCCACCTATTTTTGATGCTAGTGT 59.601 41.667 0.00 0.00 0.00 3.55
432 433 4.641989 AGCCACCTATTTTTGATGCTAGTG 59.358 41.667 0.00 0.00 0.00 2.74
433 434 4.641989 CAGCCACCTATTTTTGATGCTAGT 59.358 41.667 0.00 0.00 0.00 2.57
434 435 4.037208 CCAGCCACCTATTTTTGATGCTAG 59.963 45.833 0.00 0.00 0.00 3.42
435 436 3.953612 CCAGCCACCTATTTTTGATGCTA 59.046 43.478 0.00 0.00 0.00 3.49
436 437 2.762327 CCAGCCACCTATTTTTGATGCT 59.238 45.455 0.00 0.00 0.00 3.79
437 438 2.497273 ACCAGCCACCTATTTTTGATGC 59.503 45.455 0.00 0.00 0.00 3.91
438 439 3.676873 GCACCAGCCACCTATTTTTGATG 60.677 47.826 0.00 0.00 33.58 3.07
439 440 2.497273 GCACCAGCCACCTATTTTTGAT 59.503 45.455 0.00 0.00 33.58 2.57
440 441 1.892474 GCACCAGCCACCTATTTTTGA 59.108 47.619 0.00 0.00 33.58 2.69
441 442 1.617850 TGCACCAGCCACCTATTTTTG 59.382 47.619 0.00 0.00 41.13 2.44
442 443 2.008242 TGCACCAGCCACCTATTTTT 57.992 45.000 0.00 0.00 41.13 1.94
443 444 2.008242 TTGCACCAGCCACCTATTTT 57.992 45.000 0.00 0.00 41.13 1.82
444 445 2.236489 ATTGCACCAGCCACCTATTT 57.764 45.000 0.00 0.00 41.13 1.40
445 446 2.236489 AATTGCACCAGCCACCTATT 57.764 45.000 0.00 0.00 41.13 1.73
446 447 2.236489 AAATTGCACCAGCCACCTAT 57.764 45.000 0.00 0.00 41.13 2.57
447 448 1.892474 GAAAATTGCACCAGCCACCTA 59.108 47.619 0.00 0.00 41.13 3.08
448 449 0.681175 GAAAATTGCACCAGCCACCT 59.319 50.000 0.00 0.00 41.13 4.00
449 450 0.681175 AGAAAATTGCACCAGCCACC 59.319 50.000 0.00 0.00 41.13 4.61
450 451 1.615392 AGAGAAAATTGCACCAGCCAC 59.385 47.619 0.00 0.00 41.13 5.01
451 452 1.888512 GAGAGAAAATTGCACCAGCCA 59.111 47.619 0.00 0.00 41.13 4.75
452 453 1.135575 CGAGAGAAAATTGCACCAGCC 60.136 52.381 0.00 0.00 41.13 4.85
453 454 1.135575 CCGAGAGAAAATTGCACCAGC 60.136 52.381 0.00 0.00 42.57 4.85
454 455 2.160417 GTCCGAGAGAAAATTGCACCAG 59.840 50.000 0.00 0.00 0.00 4.00
455 456 2.151202 GTCCGAGAGAAAATTGCACCA 58.849 47.619 0.00 0.00 0.00 4.17
456 457 1.128692 CGTCCGAGAGAAAATTGCACC 59.871 52.381 0.00 0.00 0.00 5.01
457 458 2.066262 TCGTCCGAGAGAAAATTGCAC 58.934 47.619 0.00 0.00 0.00 4.57
458 459 2.448926 TCGTCCGAGAGAAAATTGCA 57.551 45.000 0.00 0.00 0.00 4.08
459 460 2.737252 ACTTCGTCCGAGAGAAAATTGC 59.263 45.455 0.00 0.00 0.00 3.56
460 461 5.163982 GGTTACTTCGTCCGAGAGAAAATTG 60.164 44.000 0.00 0.00 0.00 2.32
461 462 4.928020 GGTTACTTCGTCCGAGAGAAAATT 59.072 41.667 0.00 0.00 0.00 1.82
462 463 4.492611 GGTTACTTCGTCCGAGAGAAAAT 58.507 43.478 0.00 0.00 0.00 1.82
463 464 3.305608 GGGTTACTTCGTCCGAGAGAAAA 60.306 47.826 0.00 0.12 0.00 2.29
464 465 2.229784 GGGTTACTTCGTCCGAGAGAAA 59.770 50.000 0.00 0.00 0.00 2.52
465 466 1.815003 GGGTTACTTCGTCCGAGAGAA 59.185 52.381 0.00 0.00 0.00 2.87
466 467 1.457346 GGGTTACTTCGTCCGAGAGA 58.543 55.000 0.00 0.00 0.00 3.10
467 468 0.098376 CGGGTTACTTCGTCCGAGAG 59.902 60.000 0.00 0.00 44.69 3.20
468 469 0.606401 ACGGGTTACTTCGTCCGAGA 60.606 55.000 7.63 0.00 44.69 4.04
469 470 0.242017 AACGGGTTACTTCGTCCGAG 59.758 55.000 7.63 0.00 44.69 4.63
470 471 0.039256 CAACGGGTTACTTCGTCCGA 60.039 55.000 7.63 0.00 44.69 4.55
471 472 1.620413 GCAACGGGTTACTTCGTCCG 61.620 60.000 0.00 0.00 46.95 4.79
536 537 1.673665 CTGTCCTGGAGTTGCAGCC 60.674 63.158 0.00 0.00 0.00 4.85
546 547 2.362736 CATGTTGGATGTCTGTCCTGG 58.637 52.381 0.00 0.00 39.12 4.45
547 548 1.741706 GCATGTTGGATGTCTGTCCTG 59.258 52.381 0.00 0.00 39.12 3.86
577 594 1.225637 GGTGCACGCGTTAATGTCG 60.226 57.895 10.22 0.00 0.00 4.35
604 624 4.710695 CCAGTCGTGCGTGCCGTA 62.711 66.667 3.39 0.00 0.00 4.02
650 673 3.243737 GGGTGAATTGTCAAACCTGGAAC 60.244 47.826 0.00 0.00 34.87 3.62
671 694 4.261888 GCTGATATGGTACGGCGG 57.738 61.111 13.24 0.00 0.00 6.13
679 702 2.604914 GACAATATCCGCGCTGATATGG 59.395 50.000 28.01 26.96 37.85 2.74
680 703 2.279921 CGACAATATCCGCGCTGATATG 59.720 50.000 28.01 23.13 37.85 1.78
681 704 2.530177 CGACAATATCCGCGCTGATAT 58.470 47.619 23.69 23.69 39.14 1.63
682 705 1.977188 CGACAATATCCGCGCTGATA 58.023 50.000 21.50 21.50 0.00 2.15
683 706 1.284982 GCGACAATATCCGCGCTGAT 61.285 55.000 18.52 18.52 45.41 2.90
691 714 1.934463 CGTGGCAGCGACAATATCC 59.066 57.895 8.41 0.00 0.00 2.59
777 803 1.400846 TGACGTCATCTCTTAGCGGTC 59.599 52.381 15.76 0.00 0.00 4.79
830 868 0.680618 TTTTAACGAGGAGCGGTCCA 59.319 50.000 33.52 11.55 46.80 4.02
831 869 1.931841 GATTTTAACGAGGAGCGGTCC 59.068 52.381 26.17 26.17 46.49 4.46
852 890 5.681639 TCCCTTTTCTCTTTTTCTCTCGTT 58.318 37.500 0.00 0.00 0.00 3.85
854 892 6.619801 TTTCCCTTTTCTCTTTTTCTCTCG 57.380 37.500 0.00 0.00 0.00 4.04
855 893 7.429633 CCTTTTCCCTTTTCTCTTTTTCTCTC 58.570 38.462 0.00 0.00 0.00 3.20
856 894 6.183360 GCCTTTTCCCTTTTCTCTTTTTCTCT 60.183 38.462 0.00 0.00 0.00 3.10
900 2609 1.536907 TTGCCTGGACGGGACCTAA 60.537 57.895 0.00 0.00 30.06 2.69
1272 3286 3.055385 TCGTGAGATAAGAAAAGGGGGTG 60.055 47.826 0.00 0.00 33.31 4.61
1519 3537 6.211584 TCATCCTGCTGAACTCTAAACTACTT 59.788 38.462 0.00 0.00 0.00 2.24
1521 3539 5.967088 TCATCCTGCTGAACTCTAAACTAC 58.033 41.667 0.00 0.00 0.00 2.73
1526 3545 4.637534 GCAATTCATCCTGCTGAACTCTAA 59.362 41.667 0.00 0.00 37.93 2.10
1527 3546 4.080695 AGCAATTCATCCTGCTGAACTCTA 60.081 41.667 0.00 0.00 46.97 2.43
1528 3547 3.015327 GCAATTCATCCTGCTGAACTCT 58.985 45.455 0.00 0.00 37.93 3.24
1567 3586 5.920193 ACAATCCCACCAACATAATTCTG 57.080 39.130 0.00 0.00 0.00 3.02
1764 3808 7.170489 ACAGAGCACAAATCATATTCTATCACG 59.830 37.037 0.00 0.00 0.00 4.35
1787 3831 7.756722 CCCAATCACATAAAGCTAAAAAGACAG 59.243 37.037 0.00 0.00 0.00 3.51
1790 3834 7.775053 ACCCAATCACATAAAGCTAAAAAGA 57.225 32.000 0.00 0.00 0.00 2.52
1961 4005 3.189287 ACTTTCGGTGCAAAAGCTATCTG 59.811 43.478 8.88 0.00 37.26 2.90
2049 4120 9.058174 GCTCTACACTATGATAGTCTACTCAAA 57.942 37.037 1.33 0.00 36.76 2.69
2099 4170 9.151471 GTCACAAGACAATAGTAATTGCTTCTA 57.849 33.333 0.00 0.00 45.41 2.10
2629 4702 9.314321 CCGTATGTAGTTTGTATTGAAATCTCT 57.686 33.333 0.00 0.00 0.00 3.10
2630 4703 9.309516 TCCGTATGTAGTTTGTATTGAAATCTC 57.690 33.333 0.00 0.00 0.00 2.75
2631 4704 9.832445 ATCCGTATGTAGTTTGTATTGAAATCT 57.168 29.630 0.00 0.00 0.00 2.40
2632 4705 9.864034 CATCCGTATGTAGTTTGTATTGAAATC 57.136 33.333 0.00 0.00 0.00 2.17
2633 4706 9.391006 ACATCCGTATGTAGTTTGTATTGAAAT 57.609 29.630 0.00 0.00 44.66 2.17
2634 4707 8.780846 ACATCCGTATGTAGTTTGTATTGAAA 57.219 30.769 0.00 0.00 44.66 2.69
2663 4736 9.367444 GCAAAACTACACTCTAAAATAGCTCTA 57.633 33.333 0.00 0.00 0.00 2.43
2664 4737 8.097662 AGCAAAACTACACTCTAAAATAGCTCT 58.902 33.333 0.00 0.00 0.00 4.09
2665 4738 8.257830 AGCAAAACTACACTCTAAAATAGCTC 57.742 34.615 0.00 0.00 0.00 4.09
2666 4739 8.097662 AGAGCAAAACTACACTCTAAAATAGCT 58.902 33.333 0.00 0.00 37.72 3.32
2667 4740 8.171840 CAGAGCAAAACTACACTCTAAAATAGC 58.828 37.037 0.00 0.00 37.40 2.97
2668 4741 9.209175 ACAGAGCAAAACTACACTCTAAAATAG 57.791 33.333 0.00 0.00 37.40 1.73
2670 4743 9.726438 ATACAGAGCAAAACTACACTCTAAAAT 57.274 29.630 0.00 0.00 37.40 1.82
2671 4744 8.988934 CATACAGAGCAAAACTACACTCTAAAA 58.011 33.333 0.00 0.00 37.40 1.52
2672 4745 8.148351 ACATACAGAGCAAAACTACACTCTAAA 58.852 33.333 0.00 0.00 37.40 1.85
2673 4746 7.667557 ACATACAGAGCAAAACTACACTCTAA 58.332 34.615 0.00 0.00 37.40 2.10
2674 4747 7.228314 ACATACAGAGCAAAACTACACTCTA 57.772 36.000 0.00 0.00 37.40 2.43
2675 4748 6.102897 ACATACAGAGCAAAACTACACTCT 57.897 37.500 0.00 0.00 40.07 3.24
2676 4749 7.091443 ACTACATACAGAGCAAAACTACACTC 58.909 38.462 0.00 0.00 0.00 3.51
2677 4750 6.994221 ACTACATACAGAGCAAAACTACACT 58.006 36.000 0.00 0.00 0.00 3.55
2678 4751 6.310711 GGACTACATACAGAGCAAAACTACAC 59.689 42.308 0.00 0.00 0.00 2.90
2679 4752 6.014925 TGGACTACATACAGAGCAAAACTACA 60.015 38.462 0.00 0.00 0.00 2.74
2680 4753 6.395629 TGGACTACATACAGAGCAAAACTAC 58.604 40.000 0.00 0.00 0.00 2.73
2681 4754 6.599356 TGGACTACATACAGAGCAAAACTA 57.401 37.500 0.00 0.00 0.00 2.24
2682 4755 5.483685 TGGACTACATACAGAGCAAAACT 57.516 39.130 0.00 0.00 0.00 2.66
2683 4756 8.338259 CAATATGGACTACATACAGAGCAAAAC 58.662 37.037 0.00 0.00 44.41 2.43
2684 4757 7.498900 CCAATATGGACTACATACAGAGCAAAA 59.501 37.037 0.00 0.00 44.41 2.44
2685 4758 6.992123 CCAATATGGACTACATACAGAGCAAA 59.008 38.462 0.00 0.00 44.41 3.68
2686 4759 6.326323 TCCAATATGGACTACATACAGAGCAA 59.674 38.462 0.00 0.00 42.67 3.91
2687 4760 5.838521 TCCAATATGGACTACATACAGAGCA 59.161 40.000 0.00 0.00 42.67 4.26
2688 4761 6.346477 TCCAATATGGACTACATACAGAGC 57.654 41.667 0.00 0.00 42.67 4.09
2718 4791 9.025041 CCTCCATTCCTAAATACAAGTCTTTTT 57.975 33.333 0.00 0.00 0.00 1.94
2719 4792 7.615757 CCCTCCATTCCTAAATACAAGTCTTTT 59.384 37.037 0.00 0.00 0.00 2.27
2720 4793 7.036863 TCCCTCCATTCCTAAATACAAGTCTTT 60.037 37.037 0.00 0.00 0.00 2.52
2721 4794 6.447084 TCCCTCCATTCCTAAATACAAGTCTT 59.553 38.462 0.00 0.00 0.00 3.01
2722 4795 5.970640 TCCCTCCATTCCTAAATACAAGTCT 59.029 40.000 0.00 0.00 0.00 3.24
2728 4801 9.892130 CATATTACTCCCTCCATTCCTAAATAC 57.108 37.037 0.00 0.00 0.00 1.89
2741 4814 7.509546 TCTTGTTCATTCCATATTACTCCCTC 58.490 38.462 0.00 0.00 0.00 4.30
2787 4862 5.676837 GCATCAGCATTACTTTGCACACATA 60.677 40.000 0.00 0.00 45.23 2.29
2942 5025 2.870411 ACTAGAACGTTTGCAAGTCACC 59.130 45.455 0.46 0.00 0.00 4.02
3024 5107 1.308998 CGGGATGGCAACCTATTGTC 58.691 55.000 13.90 0.00 41.09 3.18
3073 5156 0.304705 CTGCGTTTGTTCTGCTCGTT 59.695 50.000 0.00 0.00 0.00 3.85
3119 5202 7.447374 TGAACCAAAACTCGTGATTATCAAT 57.553 32.000 0.00 0.00 0.00 2.57
3121 5204 6.128035 CCATGAACCAAAACTCGTGATTATCA 60.128 38.462 0.00 0.00 31.39 2.15
3272 5366 3.967715 GGCAACTCCCAGTTCGTC 58.032 61.111 0.00 0.00 36.03 4.20
3324 5419 3.945285 ACCAGTTCAAAGTGACACGAATT 59.055 39.130 0.00 0.00 0.00 2.17
3397 5493 8.546597 TGAAAATTCAATCGTAGACATCAGAA 57.453 30.769 0.00 0.00 32.62 3.02
3468 5572 3.343617 TGCAATCAGCCTACTTTGTACC 58.656 45.455 0.00 0.00 44.83 3.34
3503 5607 1.198637 GTGCTGTGGAGTGCATCTTTC 59.801 52.381 0.00 0.00 41.45 2.62
3516 5624 4.268644 CCGACTACAAATGATAGTGCTGTG 59.731 45.833 0.00 0.00 32.93 3.66
3520 5628 5.050091 CCAATCCGACTACAAATGATAGTGC 60.050 44.000 0.00 0.00 32.93 4.40
3557 5666 3.947196 GTGGTTCAAGATGATATGCACCA 59.053 43.478 0.00 0.00 31.83 4.17
3598 5707 5.380043 ACCAAACATGACAGGATGGATATC 58.620 41.667 18.69 0.00 43.62 1.63
3625 5734 8.480643 AATTCAACCTAAGACAGAAGATAACG 57.519 34.615 0.00 0.00 0.00 3.18
3641 5750 4.099419 AGGAAGCAAAACGAAATTCAACCT 59.901 37.500 0.00 0.00 0.00 3.50
3671 5780 2.300152 TCAGAACAGCTTGGTCTACTGG 59.700 50.000 3.80 0.00 43.78 4.00
3727 5836 4.276431 CCACCGGTTAAAACTGCTTCTTTA 59.724 41.667 2.97 0.00 33.91 1.85
3822 5958 9.627123 CCCTCTATTTTAACTGAACATGGATAA 57.373 33.333 0.00 0.00 0.00 1.75
3823 5959 8.998814 TCCCTCTATTTTAACTGAACATGGATA 58.001 33.333 0.00 0.00 0.00 2.59
3824 5960 7.872138 TCCCTCTATTTTAACTGAACATGGAT 58.128 34.615 0.00 0.00 0.00 3.41
3876 6012 9.310449 GGTAACATCAGTAGAAGGGATAGAATA 57.690 37.037 0.00 0.00 0.00 1.75
3877 6013 7.235812 GGGTAACATCAGTAGAAGGGATAGAAT 59.764 40.741 0.00 0.00 39.74 2.40
3878 6014 6.553852 GGGTAACATCAGTAGAAGGGATAGAA 59.446 42.308 0.00 0.00 39.74 2.10
3879 6015 6.075984 GGGTAACATCAGTAGAAGGGATAGA 58.924 44.000 0.00 0.00 39.74 1.98
3880 6016 6.015010 CAGGGTAACATCAGTAGAAGGGATAG 60.015 46.154 0.00 0.00 39.74 2.08
3881 6017 5.839063 CAGGGTAACATCAGTAGAAGGGATA 59.161 44.000 0.00 0.00 39.74 2.59
3894 6030 0.253044 TCTGCAGGCAGGGTAACATC 59.747 55.000 20.19 0.00 43.75 3.06
3895 6031 0.698238 TTCTGCAGGCAGGGTAACAT 59.302 50.000 20.19 0.00 43.75 2.71
3921 6057 2.546368 GCACGACCACAATGTACAGAAA 59.454 45.455 0.33 0.00 0.00 2.52
3927 6063 0.036765 GGGAGCACGACCACAATGTA 60.037 55.000 0.00 0.00 0.00 2.29
3937 6073 2.682136 TGGAATCGGGGAGCACGA 60.682 61.111 0.00 0.00 45.19 4.35
3945 6081 1.411246 TCAACGGTATCTGGAATCGGG 59.589 52.381 0.00 0.00 0.00 5.14
3946 6082 2.882927 TCAACGGTATCTGGAATCGG 57.117 50.000 0.00 0.00 0.00 4.18
3947 6083 4.119862 ACAATCAACGGTATCTGGAATCG 58.880 43.478 0.00 0.00 0.00 3.34
3984 6120 9.261180 CTACAATGACCGACAATCAATAGTAAT 57.739 33.333 0.00 0.00 0.00 1.89
4020 6159 1.091771 CCACCGGTAGCAGCATGAAG 61.092 60.000 6.87 0.00 39.69 3.02
4039 6178 6.051717 TGTAGAGACCATACTCCTACGTTAC 58.948 44.000 0.00 0.00 37.60 2.50
4040 6179 6.239217 TGTAGAGACCATACTCCTACGTTA 57.761 41.667 0.00 0.00 37.60 3.18
4048 6188 7.448777 TGTCAGGATTATGTAGAGACCATACTC 59.551 40.741 0.00 0.00 37.19 2.59
4066 6206 0.253160 TTGGGCCTACCTGTCAGGAT 60.253 55.000 26.18 11.99 37.67 3.24
4069 6209 0.035056 CCTTTGGGCCTACCTGTCAG 60.035 60.000 4.53 0.00 41.11 3.51
4085 6225 3.334054 GGGTGGAGAGGCAGCCTT 61.334 66.667 17.46 5.54 36.17 4.35
4089 6229 3.086600 GGGAGGGTGGAGAGGCAG 61.087 72.222 0.00 0.00 0.00 4.85
4106 6246 1.956170 AGCTTGAACGTGTCGCTGG 60.956 57.895 0.00 0.00 0.00 4.85
4107 6247 1.202568 CAGCTTGAACGTGTCGCTG 59.797 57.895 12.76 12.76 41.57 5.18
4108 6248 0.319900 ATCAGCTTGAACGTGTCGCT 60.320 50.000 0.00 0.00 0.00 4.93
4109 6249 0.093705 GATCAGCTTGAACGTGTCGC 59.906 55.000 0.00 0.00 0.00 5.19
4110 6250 0.363512 CGATCAGCTTGAACGTGTCG 59.636 55.000 0.00 0.00 37.78 4.35
4111 6251 1.387084 GTCGATCAGCTTGAACGTGTC 59.613 52.381 12.76 0.00 42.22 3.67
4112 6252 1.419374 GTCGATCAGCTTGAACGTGT 58.581 50.000 12.76 0.00 42.22 4.49
4113 6253 0.363512 CGTCGATCAGCTTGAACGTG 59.636 55.000 12.76 6.27 42.22 4.49
4114 6254 0.039437 ACGTCGATCAGCTTGAACGT 60.039 50.000 0.00 10.35 42.22 3.99
4115 6255 0.635731 GACGTCGATCAGCTTGAACG 59.364 55.000 0.00 8.71 42.82 3.95
4116 6256 1.387084 GTGACGTCGATCAGCTTGAAC 59.613 52.381 11.62 0.00 0.00 3.18
4117 6257 1.000717 TGTGACGTCGATCAGCTTGAA 60.001 47.619 11.62 0.00 0.00 2.69
4118 6258 0.596082 TGTGACGTCGATCAGCTTGA 59.404 50.000 11.62 0.00 0.00 3.02
4119 6259 0.987715 CTGTGACGTCGATCAGCTTG 59.012 55.000 11.62 0.00 0.00 4.01
4120 6260 0.109086 CCTGTGACGTCGATCAGCTT 60.109 55.000 21.50 0.00 0.00 3.74
4121 6261 1.244697 ACCTGTGACGTCGATCAGCT 61.245 55.000 21.50 11.33 0.00 4.24
4122 6262 1.073216 CACCTGTGACGTCGATCAGC 61.073 60.000 21.50 6.46 0.00 4.26
4123 6263 0.521735 TCACCTGTGACGTCGATCAG 59.478 55.000 20.57 20.57 34.14 2.90
4124 6264 0.955905 TTCACCTGTGACGTCGATCA 59.044 50.000 11.62 9.15 39.66 2.92
4125 6265 2.186076 GATTCACCTGTGACGTCGATC 58.814 52.381 11.62 4.73 39.66 3.69
4126 6266 1.135083 GGATTCACCTGTGACGTCGAT 60.135 52.381 11.62 0.00 39.66 3.59
4127 6267 0.242825 GGATTCACCTGTGACGTCGA 59.757 55.000 11.62 0.00 39.66 4.20
4128 6268 2.738147 GGATTCACCTGTGACGTCG 58.262 57.895 11.62 0.00 39.66 5.12
4138 6278 0.460987 CAGACGGCTGAGGATTCACC 60.461 60.000 14.96 0.00 45.17 4.02
4139 6279 0.532573 TCAGACGGCTGAGGATTCAC 59.467 55.000 19.45 0.00 45.88 3.18
4140 6280 2.976099 TCAGACGGCTGAGGATTCA 58.024 52.632 19.45 0.00 45.88 2.57
4188 6328 0.735471 TTGCTCAGTCCGAGATCGAG 59.265 55.000 3.31 0.00 45.45 4.04
4189 6329 1.173913 TTTGCTCAGTCCGAGATCGA 58.826 50.000 3.31 0.00 45.45 3.59
4190 6330 1.996292 TTTTGCTCAGTCCGAGATCG 58.004 50.000 0.00 0.00 45.45 3.69
4191 6331 3.589988 TCTTTTTGCTCAGTCCGAGATC 58.410 45.455 0.00 0.00 45.45 2.75
4192 6332 3.685139 TCTTTTTGCTCAGTCCGAGAT 57.315 42.857 0.00 0.00 45.45 2.75
4193 6333 3.393800 CTTCTTTTTGCTCAGTCCGAGA 58.606 45.455 0.00 0.00 45.45 4.04


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.