Multiple sequence alignment - TraesCS4A01G400000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G400000 chr4A 100.000 3584 0 0 1 3584 674590412 674586829 0.000000e+00 6619.0
1 TraesCS4A01G400000 chr4A 86.107 2253 282 14 566 2803 674721118 674718882 0.000000e+00 2398.0
2 TraesCS4A01G400000 chr4A 87.277 2020 249 3 566 2580 674616515 674614499 0.000000e+00 2300.0
3 TraesCS4A01G400000 chr4A 83.308 2013 306 19 596 2587 674937844 674939847 0.000000e+00 1829.0
4 TraesCS4A01G400000 chr4A 93.886 687 34 5 2902 3584 718188719 718189401 0.000000e+00 1029.0
5 TraesCS4A01G400000 chr4A 92.371 734 27 8 2878 3584 711154310 711155041 0.000000e+00 1018.0
6 TraesCS4A01G400000 chr4A 92.754 690 42 6 2902 3584 718082684 718083372 0.000000e+00 990.0
7 TraesCS4A01G400000 chr4A 94.382 89 5 0 2789 2877 674718866 674718778 1.740000e-28 137.0
8 TraesCS4A01G400000 chrUn 88.630 2445 246 17 452 2877 91240337 91242768 0.000000e+00 2946.0
9 TraesCS4A01G400000 chrUn 75.962 936 207 16 598 1524 46240644 46241570 1.950000e-127 466.0
10 TraesCS4A01G400000 chr7A 86.857 2062 256 9 546 2594 62728836 62726777 0.000000e+00 2292.0
11 TraesCS4A01G400000 chr7A 84.539 2018 293 12 585 2588 62841881 62843893 0.000000e+00 1980.0
12 TraesCS4A01G400000 chr7A 78.230 836 145 22 1771 2585 62845015 62845834 5.340000e-138 501.0
13 TraesCS4A01G400000 chr7D 83.706 2013 304 19 596 2587 58489869 58491878 0.000000e+00 1879.0
14 TraesCS4A01G400000 chr7D 90.449 178 12 2 87 262 120323642 120323468 2.780000e-56 230.0
15 TraesCS4A01G400000 chr7D 89.583 48 5 0 2456 2503 3074546 3074499 1.070000e-05 62.1
16 TraesCS4A01G400000 chr7B 92.504 707 44 6 2878 3584 653388107 653388804 0.000000e+00 1003.0
17 TraesCS4A01G400000 chr5B 91.870 738 29 4 2877 3584 231809571 231808835 0.000000e+00 1002.0
18 TraesCS4A01G400000 chr5B 91.765 170 8 3 90 256 550926348 550926514 7.740000e-57 231.0
19 TraesCS4A01G400000 chr5B 90.476 168 9 5 91 255 1751343 1751180 7.790000e-52 215.0
20 TraesCS4A01G400000 chr3B 91.382 731 36 8 2878 3584 49322674 49323401 0.000000e+00 976.0
21 TraesCS4A01G400000 chr3B 91.036 714 57 4 2877 3584 707470362 707469650 0.000000e+00 957.0
22 TraesCS4A01G400000 chr3B 90.819 708 56 5 2877 3584 40024266 40024964 0.000000e+00 939.0
23 TraesCS4A01G400000 chr3B 89.467 750 36 11 2875 3584 752219383 752220129 0.000000e+00 907.0
24 TraesCS4A01G400000 chr3B 96.226 530 20 0 3055 3584 647481144 647481673 0.000000e+00 869.0
25 TraesCS4A01G400000 chr3B 93.989 183 10 1 2878 3060 31039413 31039232 3.520000e-70 276.0
26 TraesCS4A01G400000 chr1B 91.226 718 50 6 2878 3584 74131704 74130989 0.000000e+00 965.0
27 TraesCS4A01G400000 chr1B 89.177 693 60 9 2902 3584 33422933 33423620 0.000000e+00 850.0
28 TraesCS4A01G400000 chr2B 90.859 733 41 7 2877 3584 545220361 545219630 0.000000e+00 959.0
29 TraesCS4A01G400000 chr2B 90.419 167 11 3 90 256 363483000 363483161 7.790000e-52 215.0
30 TraesCS4A01G400000 chr1D 77.547 913 194 9 634 1539 8613755 8614663 1.130000e-149 540.0
31 TraesCS4A01G400000 chr4D 91.813 171 10 3 90 258 392739461 392739293 5.980000e-58 235.0
32 TraesCS4A01G400000 chr3A 92.169 166 7 4 96 258 655515660 655515498 2.780000e-56 230.0
33 TraesCS4A01G400000 chr3A 90.286 175 9 3 88 256 107736692 107736864 4.660000e-54 222.0
34 TraesCS4A01G400000 chr4B 91.667 168 9 4 91 256 24565071 24565235 1.000000e-55 228.0
35 TraesCS4A01G400000 chr4B 91.176 170 10 3 88 256 107660468 107660303 3.600000e-55 226.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G400000 chr4A 674586829 674590412 3583 True 6619.0 6619 100.0000 1 3584 1 chr4A.!!$R1 3583
1 TraesCS4A01G400000 chr4A 674614499 674616515 2016 True 2300.0 2300 87.2770 566 2580 1 chr4A.!!$R2 2014
2 TraesCS4A01G400000 chr4A 674937844 674939847 2003 False 1829.0 1829 83.3080 596 2587 1 chr4A.!!$F1 1991
3 TraesCS4A01G400000 chr4A 674718778 674721118 2340 True 1267.5 2398 90.2445 566 2877 2 chr4A.!!$R3 2311
4 TraesCS4A01G400000 chr4A 718188719 718189401 682 False 1029.0 1029 93.8860 2902 3584 1 chr4A.!!$F4 682
5 TraesCS4A01G400000 chr4A 711154310 711155041 731 False 1018.0 1018 92.3710 2878 3584 1 chr4A.!!$F2 706
6 TraesCS4A01G400000 chr4A 718082684 718083372 688 False 990.0 990 92.7540 2902 3584 1 chr4A.!!$F3 682
7 TraesCS4A01G400000 chrUn 91240337 91242768 2431 False 2946.0 2946 88.6300 452 2877 1 chrUn.!!$F2 2425
8 TraesCS4A01G400000 chrUn 46240644 46241570 926 False 466.0 466 75.9620 598 1524 1 chrUn.!!$F1 926
9 TraesCS4A01G400000 chr7A 62726777 62728836 2059 True 2292.0 2292 86.8570 546 2594 1 chr7A.!!$R1 2048
10 TraesCS4A01G400000 chr7A 62841881 62845834 3953 False 1240.5 1980 81.3845 585 2588 2 chr7A.!!$F1 2003
11 TraesCS4A01G400000 chr7D 58489869 58491878 2009 False 1879.0 1879 83.7060 596 2587 1 chr7D.!!$F1 1991
12 TraesCS4A01G400000 chr7B 653388107 653388804 697 False 1003.0 1003 92.5040 2878 3584 1 chr7B.!!$F1 706
13 TraesCS4A01G400000 chr5B 231808835 231809571 736 True 1002.0 1002 91.8700 2877 3584 1 chr5B.!!$R2 707
14 TraesCS4A01G400000 chr3B 49322674 49323401 727 False 976.0 976 91.3820 2878 3584 1 chr3B.!!$F2 706
15 TraesCS4A01G400000 chr3B 707469650 707470362 712 True 957.0 957 91.0360 2877 3584 1 chr3B.!!$R2 707
16 TraesCS4A01G400000 chr3B 40024266 40024964 698 False 939.0 939 90.8190 2877 3584 1 chr3B.!!$F1 707
17 TraesCS4A01G400000 chr3B 752219383 752220129 746 False 907.0 907 89.4670 2875 3584 1 chr3B.!!$F4 709
18 TraesCS4A01G400000 chr3B 647481144 647481673 529 False 869.0 869 96.2260 3055 3584 1 chr3B.!!$F3 529
19 TraesCS4A01G400000 chr1B 74130989 74131704 715 True 965.0 965 91.2260 2878 3584 1 chr1B.!!$R1 706
20 TraesCS4A01G400000 chr1B 33422933 33423620 687 False 850.0 850 89.1770 2902 3584 1 chr1B.!!$F1 682
21 TraesCS4A01G400000 chr2B 545219630 545220361 731 True 959.0 959 90.8590 2877 3584 1 chr2B.!!$R1 707
22 TraesCS4A01G400000 chr1D 8613755 8614663 908 False 540.0 540 77.5470 634 1539 1 chr1D.!!$F1 905

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
503 504 0.031314 CTCTCTCTGCGTGTGTGTGT 59.969 55.0 0.0 0.0 0.00 3.72 F
504 505 0.249031 TCTCTCTGCGTGTGTGTGTG 60.249 55.0 0.0 0.0 0.00 3.82 F
505 506 0.249031 CTCTCTGCGTGTGTGTGTGA 60.249 55.0 0.0 0.0 0.00 3.58 F
2245 2274 0.319641 AGAGTCGTTCAAGGGCGAAC 60.320 55.0 0.0 0.0 41.56 3.95 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2113 2139 0.114954 TTGGCCAGATTTTCCAGCCT 59.885 50.000 5.11 0.0 44.19 4.58 R
2329 2361 1.032014 GCTGCTCCCTTGTCAAAACA 58.968 50.000 0.00 0.0 0.00 2.83 R
2469 2528 1.777272 ACAACTTCCTTGAGGCTTCCT 59.223 47.619 0.00 0.0 36.03 3.36 R
3337 3789 3.459145 TGTTGTTCGACCAATCTTTCGA 58.541 40.909 0.00 0.0 42.35 3.71 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 7.178712 CCCTCACTTCGTATTTTATGTCATC 57.821 40.000 0.00 0.00 0.00 2.92
25 26 6.761242 CCCTCACTTCGTATTTTATGTCATCA 59.239 38.462 0.00 0.00 0.00 3.07
26 27 7.279981 CCCTCACTTCGTATTTTATGTCATCAA 59.720 37.037 0.00 0.00 0.00 2.57
27 28 8.664798 CCTCACTTCGTATTTTATGTCATCAAA 58.335 33.333 0.00 0.00 0.00 2.69
73 74 9.901172 ATTATCTCGATAGTGGTTAAGGTTTTT 57.099 29.630 0.00 0.00 37.40 1.94
122 123 4.838152 CGGCCGGTGCATGTAGCT 62.838 66.667 20.10 0.00 45.94 3.32
123 124 2.897350 GGCCGGTGCATGTAGCTC 60.897 66.667 11.25 2.94 45.94 4.09
129 130 1.450312 GTGCATGTAGCTCCCGCTT 60.450 57.895 0.00 0.00 46.47 4.68
130 131 1.450134 TGCATGTAGCTCCCGCTTG 60.450 57.895 0.00 0.00 46.47 4.01
131 132 2.828128 GCATGTAGCTCCCGCTTGC 61.828 63.158 0.00 0.00 46.47 4.01
132 133 2.202932 ATGTAGCTCCCGCTTGCG 60.203 61.111 8.14 8.14 46.47 4.85
133 134 3.740128 ATGTAGCTCCCGCTTGCGG 62.740 63.158 25.17 25.17 46.47 5.69
134 135 4.143333 GTAGCTCCCGCTTGCGGA 62.143 66.667 32.16 18.04 46.47 5.54
135 136 3.838271 TAGCTCCCGCTTGCGGAG 61.838 66.667 32.16 25.45 46.47 4.63
143 144 4.785453 GCTTGCGGAGGGTCTGGG 62.785 72.222 0.00 0.00 0.00 4.45
144 145 4.101448 CTTGCGGAGGGTCTGGGG 62.101 72.222 0.00 0.00 0.00 4.96
145 146 4.649705 TTGCGGAGGGTCTGGGGA 62.650 66.667 0.00 0.00 0.00 4.81
146 147 4.649705 TGCGGAGGGTCTGGGGAA 62.650 66.667 0.00 0.00 0.00 3.97
147 148 3.787001 GCGGAGGGTCTGGGGAAG 61.787 72.222 0.00 0.00 0.00 3.46
148 149 3.083997 CGGAGGGTCTGGGGAAGG 61.084 72.222 0.00 0.00 0.00 3.46
149 150 2.692741 GGAGGGTCTGGGGAAGGG 60.693 72.222 0.00 0.00 0.00 3.95
150 151 2.125225 GAGGGTCTGGGGAAGGGT 59.875 66.667 0.00 0.00 0.00 4.34
151 152 1.996187 GAGGGTCTGGGGAAGGGTC 60.996 68.421 0.00 0.00 0.00 4.46
152 153 3.015753 GGGTCTGGGGAAGGGTCC 61.016 72.222 0.00 0.00 44.10 4.46
153 154 3.400054 GGTCTGGGGAAGGGTCCG 61.400 72.222 0.00 0.00 46.04 4.79
154 155 2.284405 GTCTGGGGAAGGGTCCGA 60.284 66.667 0.00 0.00 46.04 4.55
155 156 2.284405 TCTGGGGAAGGGTCCGAC 60.284 66.667 0.00 0.00 46.04 4.79
156 157 3.400054 CTGGGGAAGGGTCCGACC 61.400 72.222 9.30 9.30 46.04 4.79
157 158 4.257810 TGGGGAAGGGTCCGACCA 62.258 66.667 19.43 0.00 46.04 4.02
158 159 3.714001 GGGGAAGGGTCCGACCAC 61.714 72.222 19.43 8.70 46.04 4.16
159 160 2.606826 GGGAAGGGTCCGACCACT 60.607 66.667 19.43 10.80 46.04 4.00
160 161 2.222013 GGGAAGGGTCCGACCACTT 61.222 63.158 19.43 17.88 46.04 3.16
161 162 1.759236 GGAAGGGTCCGACCACTTT 59.241 57.895 19.43 9.96 41.02 2.66
162 163 0.605589 GGAAGGGTCCGACCACTTTG 60.606 60.000 19.43 0.00 41.02 2.77
163 164 0.605589 GAAGGGTCCGACCACTTTGG 60.606 60.000 19.43 0.00 41.02 3.28
164 165 2.033602 GGGTCCGACCACTTTGGG 59.966 66.667 19.43 0.00 43.37 4.12
165 166 2.826003 GGGTCCGACCACTTTGGGT 61.826 63.158 19.43 0.00 43.37 4.51
176 177 5.672421 ACCACTTTGGGTCTATAGTACAC 57.328 43.478 0.00 0.00 43.37 2.90
177 178 5.088730 ACCACTTTGGGTCTATAGTACACA 58.911 41.667 0.00 1.68 43.37 3.72
178 179 5.187186 ACCACTTTGGGTCTATAGTACACAG 59.813 44.000 0.00 3.32 43.37 3.66
179 180 5.109903 CACTTTGGGTCTATAGTACACAGC 58.890 45.833 0.00 0.00 30.52 4.40
180 181 4.161754 ACTTTGGGTCTATAGTACACAGCC 59.838 45.833 0.00 0.00 30.52 4.85
181 182 3.682592 TGGGTCTATAGTACACAGCCT 57.317 47.619 0.00 0.00 0.00 4.58
182 183 3.990369 TGGGTCTATAGTACACAGCCTT 58.010 45.455 0.00 0.00 0.00 4.35
183 184 4.359105 TGGGTCTATAGTACACAGCCTTT 58.641 43.478 0.00 0.00 0.00 3.11
184 185 4.404715 TGGGTCTATAGTACACAGCCTTTC 59.595 45.833 0.00 0.00 0.00 2.62
185 186 4.202233 GGGTCTATAGTACACAGCCTTTCC 60.202 50.000 0.00 0.00 0.00 3.13
186 187 4.202233 GGTCTATAGTACACAGCCTTTCCC 60.202 50.000 0.00 0.00 0.00 3.97
187 188 4.650131 GTCTATAGTACACAGCCTTTCCCT 59.350 45.833 0.00 0.00 0.00 4.20
188 189 5.832060 GTCTATAGTACACAGCCTTTCCCTA 59.168 44.000 0.00 0.00 0.00 3.53
189 190 5.832060 TCTATAGTACACAGCCTTTCCCTAC 59.168 44.000 0.00 0.00 0.00 3.18
190 191 2.616524 AGTACACAGCCTTTCCCTACA 58.383 47.619 0.00 0.00 0.00 2.74
191 192 3.182152 AGTACACAGCCTTTCCCTACAT 58.818 45.455 0.00 0.00 0.00 2.29
192 193 3.587506 AGTACACAGCCTTTCCCTACATT 59.412 43.478 0.00 0.00 0.00 2.71
193 194 3.525800 ACACAGCCTTTCCCTACATTT 57.474 42.857 0.00 0.00 0.00 2.32
194 195 3.421844 ACACAGCCTTTCCCTACATTTC 58.578 45.455 0.00 0.00 0.00 2.17
195 196 3.074538 ACACAGCCTTTCCCTACATTTCT 59.925 43.478 0.00 0.00 0.00 2.52
196 197 3.441572 CACAGCCTTTCCCTACATTTCTG 59.558 47.826 0.00 0.00 0.00 3.02
197 198 3.074538 ACAGCCTTTCCCTACATTTCTGT 59.925 43.478 0.00 0.00 39.49 3.41
198 199 4.288626 ACAGCCTTTCCCTACATTTCTGTA 59.711 41.667 0.00 0.00 36.79 2.74
199 200 5.222048 ACAGCCTTTCCCTACATTTCTGTAA 60.222 40.000 0.00 0.00 37.41 2.41
200 201 5.355350 CAGCCTTTCCCTACATTTCTGTAAG 59.645 44.000 0.00 0.00 37.41 2.34
201 202 5.250774 AGCCTTTCCCTACATTTCTGTAAGA 59.749 40.000 0.00 0.00 44.68 2.10
214 215 4.008074 TCTGTAAGAGGCTGTTTTCAGG 57.992 45.455 20.26 9.17 42.82 3.86
215 216 3.646162 TCTGTAAGAGGCTGTTTTCAGGA 59.354 43.478 20.26 10.59 42.82 3.86
216 217 3.748568 CTGTAAGAGGCTGTTTTCAGGAC 59.251 47.826 0.90 0.00 42.11 3.85
217 218 4.503991 CTGTAAGAGGCTGTTTTCAGGACT 60.504 45.833 0.90 0.00 42.11 3.85
218 219 5.974725 CTGTAAGAGGCTGTTTTCAGGACTT 60.975 44.000 0.90 0.00 42.11 3.01
219 220 7.409465 CTGTAAGAGGCTGTTTTCAGGACTTT 61.409 42.308 0.90 0.00 42.11 2.66
220 221 9.323484 CTGTAAGAGGCTGTTTTCAGGACTTTG 62.323 44.444 0.90 0.00 42.11 2.77
224 225 3.360249 CTGTTTTCAGGACTTTGGCAG 57.640 47.619 0.00 0.00 43.61 4.85
225 226 1.408702 TGTTTTCAGGACTTTGGCAGC 59.591 47.619 0.00 0.00 0.00 5.25
226 227 1.408702 GTTTTCAGGACTTTGGCAGCA 59.591 47.619 0.00 0.00 0.00 4.41
227 228 1.321474 TTTCAGGACTTTGGCAGCAG 58.679 50.000 0.00 0.00 0.00 4.24
228 229 1.174712 TTCAGGACTTTGGCAGCAGC 61.175 55.000 0.00 0.00 41.10 5.25
229 230 1.602888 CAGGACTTTGGCAGCAGCT 60.603 57.895 0.00 0.00 41.70 4.24
230 231 1.152368 AGGACTTTGGCAGCAGCTT 59.848 52.632 0.00 0.00 41.70 3.74
231 232 0.468771 AGGACTTTGGCAGCAGCTTT 60.469 50.000 0.00 0.00 41.70 3.51
232 233 1.202927 AGGACTTTGGCAGCAGCTTTA 60.203 47.619 0.00 0.00 41.70 1.85
233 234 1.068264 GGACTTTGGCAGCAGCTTTAC 60.068 52.381 0.00 0.00 41.70 2.01
234 235 0.961753 ACTTTGGCAGCAGCTTTACC 59.038 50.000 0.00 0.00 41.70 2.85
235 236 0.961019 CTTTGGCAGCAGCTTTACCA 59.039 50.000 0.00 4.70 41.70 3.25
236 237 0.673437 TTTGGCAGCAGCTTTACCAC 59.327 50.000 7.90 0.00 41.70 4.16
237 238 0.178992 TTGGCAGCAGCTTTACCACT 60.179 50.000 7.90 0.00 41.70 4.00
238 239 0.890542 TGGCAGCAGCTTTACCACTG 60.891 55.000 0.00 0.00 41.70 3.66
242 243 2.870372 CAGCTTTACCACTGCGCC 59.130 61.111 4.18 0.00 0.00 6.53
243 244 1.965930 CAGCTTTACCACTGCGCCA 60.966 57.895 4.18 0.00 0.00 5.69
244 245 1.228124 AGCTTTACCACTGCGCCAA 60.228 52.632 4.18 0.00 0.00 4.52
245 246 1.210155 GCTTTACCACTGCGCCAAG 59.790 57.895 4.18 0.00 0.00 3.61
246 247 1.875963 CTTTACCACTGCGCCAAGG 59.124 57.895 4.18 6.21 0.00 3.61
247 248 2.200170 CTTTACCACTGCGCCAAGGC 62.200 60.000 4.18 0.00 37.85 4.35
248 249 2.690653 TTTACCACTGCGCCAAGGCT 62.691 55.000 4.18 0.00 39.32 4.58
249 250 3.605749 TACCACTGCGCCAAGGCTC 62.606 63.158 4.18 1.20 39.32 4.70
267 268 6.598427 AGGCTCCCCTTCTTAATTTTATCT 57.402 37.500 0.00 0.00 38.74 1.98
268 269 7.707467 AGGCTCCCCTTCTTAATTTTATCTA 57.293 36.000 0.00 0.00 38.74 1.98
269 270 7.519057 AGGCTCCCCTTCTTAATTTTATCTAC 58.481 38.462 0.00 0.00 38.74 2.59
270 271 7.128883 AGGCTCCCCTTCTTAATTTTATCTACA 59.871 37.037 0.00 0.00 38.74 2.74
271 272 7.778382 GGCTCCCCTTCTTAATTTTATCTACAA 59.222 37.037 0.00 0.00 0.00 2.41
272 273 9.185680 GCTCCCCTTCTTAATTTTATCTACAAA 57.814 33.333 0.00 0.00 0.00 2.83
314 315 8.871686 ATAAACTTGTCTGTTTTCCACATTTC 57.128 30.769 0.00 0.00 40.23 2.17
315 316 5.913137 ACTTGTCTGTTTTCCACATTTCA 57.087 34.783 0.00 0.00 33.76 2.69
316 317 5.894807 ACTTGTCTGTTTTCCACATTTCAG 58.105 37.500 0.00 0.00 33.76 3.02
317 318 5.418840 ACTTGTCTGTTTTCCACATTTCAGT 59.581 36.000 0.00 0.00 33.76 3.41
318 319 5.913137 TGTCTGTTTTCCACATTTCAGTT 57.087 34.783 0.00 0.00 33.76 3.16
319 320 5.649557 TGTCTGTTTTCCACATTTCAGTTG 58.350 37.500 0.00 0.00 33.76 3.16
320 321 5.184864 TGTCTGTTTTCCACATTTCAGTTGT 59.815 36.000 0.00 0.00 33.76 3.32
321 322 6.099341 GTCTGTTTTCCACATTTCAGTTGTT 58.901 36.000 0.00 0.00 33.76 2.83
322 323 6.589907 GTCTGTTTTCCACATTTCAGTTGTTT 59.410 34.615 0.00 0.00 33.76 2.83
323 324 6.589523 TCTGTTTTCCACATTTCAGTTGTTTG 59.410 34.615 0.00 0.00 33.76 2.93
324 325 6.459066 TGTTTTCCACATTTCAGTTGTTTGA 58.541 32.000 0.00 0.00 0.00 2.69
325 326 6.931281 TGTTTTCCACATTTCAGTTGTTTGAA 59.069 30.769 0.00 0.00 35.38 2.69
326 327 7.605691 TGTTTTCCACATTTCAGTTGTTTGAAT 59.394 29.630 0.00 0.00 36.97 2.57
327 328 8.450180 GTTTTCCACATTTCAGTTGTTTGAATT 58.550 29.630 0.00 0.00 36.97 2.17
328 329 8.558973 TTTCCACATTTCAGTTGTTTGAATTT 57.441 26.923 0.00 0.00 36.97 1.82
329 330 7.769272 TCCACATTTCAGTTGTTTGAATTTC 57.231 32.000 0.00 0.00 36.97 2.17
330 331 7.326454 TCCACATTTCAGTTGTTTGAATTTCA 58.674 30.769 0.00 0.00 36.97 2.69
331 332 7.986320 TCCACATTTCAGTTGTTTGAATTTCAT 59.014 29.630 0.00 0.00 36.97 2.57
332 333 8.614346 CCACATTTCAGTTGTTTGAATTTCATT 58.386 29.630 0.00 0.00 36.97 2.57
333 334 9.991388 CACATTTCAGTTGTTTGAATTTCATTT 57.009 25.926 0.00 0.00 36.97 2.32
400 401 6.875926 AAATCTAGCGATTTTGAACATTGC 57.124 33.333 0.00 0.00 45.18 3.56
401 402 4.002267 TCTAGCGATTTTGAACATTGCG 57.998 40.909 0.00 0.00 36.30 4.85
402 403 1.339711 AGCGATTTTGAACATTGCGC 58.660 45.000 0.00 0.00 42.88 6.09
403 404 1.059173 GCGATTTTGAACATTGCGCA 58.941 45.000 5.66 5.66 42.21 6.09
404 405 1.058129 GCGATTTTGAACATTGCGCAG 59.942 47.619 11.31 1.78 42.21 5.18
405 406 2.583739 CGATTTTGAACATTGCGCAGA 58.416 42.857 11.31 1.94 0.00 4.26
406 407 3.173599 CGATTTTGAACATTGCGCAGAT 58.826 40.909 11.31 4.61 0.00 2.90
407 408 3.609373 CGATTTTGAACATTGCGCAGATT 59.391 39.130 11.31 6.36 0.00 2.40
408 409 4.489682 CGATTTTGAACATTGCGCAGATTG 60.490 41.667 11.31 12.67 0.00 2.67
409 410 1.700523 TTGAACATTGCGCAGATTGC 58.299 45.000 11.31 2.21 40.69 3.56
410 411 0.597072 TGAACATTGCGCAGATTGCA 59.403 45.000 11.31 5.15 45.36 4.08
411 412 1.202817 TGAACATTGCGCAGATTGCAT 59.797 42.857 11.31 0.00 45.36 3.96
412 413 2.264813 GAACATTGCGCAGATTGCATT 58.735 42.857 11.31 1.64 45.36 3.56
413 414 1.635844 ACATTGCGCAGATTGCATTG 58.364 45.000 11.31 7.94 45.36 2.82
414 415 0.300491 CATTGCGCAGATTGCATTGC 59.700 50.000 11.31 0.46 45.36 3.56
420 421 0.994263 GCAGATTGCATTGCGAAACC 59.006 50.000 1.96 0.00 44.26 3.27
421 422 1.669502 GCAGATTGCATTGCGAAACCA 60.670 47.619 1.96 0.00 44.26 3.67
422 423 2.674954 CAGATTGCATTGCGAAACCAA 58.325 42.857 1.96 0.00 0.00 3.67
423 424 3.058450 CAGATTGCATTGCGAAACCAAA 58.942 40.909 1.96 0.00 0.00 3.28
424 425 3.680937 CAGATTGCATTGCGAAACCAAAT 59.319 39.130 1.96 0.00 0.00 2.32
425 426 4.152759 CAGATTGCATTGCGAAACCAAATT 59.847 37.500 1.96 0.00 0.00 1.82
426 427 3.874400 TTGCATTGCGAAACCAAATTG 57.126 38.095 3.84 0.00 0.00 2.32
427 428 1.530293 TGCATTGCGAAACCAAATTGC 59.470 42.857 3.84 0.00 33.51 3.56
428 429 1.799994 GCATTGCGAAACCAAATTGCT 59.200 42.857 0.00 0.00 31.41 3.91
429 430 2.992543 GCATTGCGAAACCAAATTGCTA 59.007 40.909 0.00 0.00 31.41 3.49
430 431 3.618150 GCATTGCGAAACCAAATTGCTAT 59.382 39.130 0.00 0.00 31.41 2.97
431 432 4.093261 GCATTGCGAAACCAAATTGCTATT 59.907 37.500 0.00 0.00 31.41 1.73
432 433 5.390779 GCATTGCGAAACCAAATTGCTATTT 60.391 36.000 0.00 0.00 34.29 1.40
433 434 6.601264 CATTGCGAAACCAAATTGCTATTTT 58.399 32.000 3.23 0.00 31.63 1.82
434 435 7.623089 GCATTGCGAAACCAAATTGCTATTTTA 60.623 33.333 3.23 0.00 31.63 1.52
435 436 7.897575 TTGCGAAACCAAATTGCTATTTTAT 57.102 28.000 3.23 0.00 31.63 1.40
436 437 7.897575 TGCGAAACCAAATTGCTATTTTATT 57.102 28.000 3.23 0.00 31.63 1.40
437 438 8.316640 TGCGAAACCAAATTGCTATTTTATTT 57.683 26.923 3.23 7.31 31.63 1.40
438 439 8.778358 TGCGAAACCAAATTGCTATTTTATTTT 58.222 25.926 3.23 4.04 31.63 1.82
468 469 5.799936 CAGTTTCGAACTTCATCTCTCTCTC 59.200 44.000 0.00 0.00 40.46 3.20
476 477 5.923204 ACTTCATCTCTCTCTCTCTCTCTC 58.077 45.833 0.00 0.00 0.00 3.20
484 485 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
492 493 4.892345 TCTCTCTCTCTCTCTCTCTCTCTG 59.108 50.000 0.00 0.00 0.00 3.35
493 494 3.386078 TCTCTCTCTCTCTCTCTCTCTGC 59.614 52.174 0.00 0.00 0.00 4.26
494 495 2.101415 TCTCTCTCTCTCTCTCTCTGCG 59.899 54.545 0.00 0.00 0.00 5.18
495 496 1.831106 TCTCTCTCTCTCTCTCTGCGT 59.169 52.381 0.00 0.00 0.00 5.24
499 500 1.164411 CTCTCTCTCTCTGCGTGTGT 58.836 55.000 0.00 0.00 0.00 3.72
502 503 0.312102 TCTCTCTCTGCGTGTGTGTG 59.688 55.000 0.00 0.00 0.00 3.82
503 504 0.031314 CTCTCTCTGCGTGTGTGTGT 59.969 55.000 0.00 0.00 0.00 3.72
504 505 0.249031 TCTCTCTGCGTGTGTGTGTG 60.249 55.000 0.00 0.00 0.00 3.82
505 506 0.249031 CTCTCTGCGTGTGTGTGTGA 60.249 55.000 0.00 0.00 0.00 3.58
506 507 0.389025 TCTCTGCGTGTGTGTGTGAT 59.611 50.000 0.00 0.00 0.00 3.06
507 508 0.786581 CTCTGCGTGTGTGTGTGATC 59.213 55.000 0.00 0.00 0.00 2.92
508 509 0.939106 TCTGCGTGTGTGTGTGATCG 60.939 55.000 0.00 0.00 0.00 3.69
509 510 1.215014 CTGCGTGTGTGTGTGATCGT 61.215 55.000 0.00 0.00 0.00 3.73
510 511 1.201578 GCGTGTGTGTGTGATCGTG 59.798 57.895 0.00 0.00 0.00 4.35
511 512 1.201578 CGTGTGTGTGTGATCGTGC 59.798 57.895 0.00 0.00 0.00 5.34
514 515 3.041351 TGTGTGTGATCGTGCGCC 61.041 61.111 4.18 0.00 0.00 6.53
523 524 1.202348 TGATCGTGCGCCATATCCTAG 59.798 52.381 4.18 0.00 0.00 3.02
535 536 4.389374 CCATATCCTAGGCAAACATCGTT 58.611 43.478 2.96 0.00 0.00 3.85
536 537 4.214119 CCATATCCTAGGCAAACATCGTTG 59.786 45.833 2.96 0.00 0.00 4.10
537 538 2.107950 TCCTAGGCAAACATCGTTGG 57.892 50.000 2.96 0.00 0.00 3.77
540 558 3.008157 TCCTAGGCAAACATCGTTGGTTA 59.992 43.478 2.96 0.00 29.51 2.85
543 561 5.587043 CCTAGGCAAACATCGTTGGTTATTA 59.413 40.000 0.00 0.00 29.51 0.98
550 568 7.008266 GCAAACATCGTTGGTTATTACTGAATG 59.992 37.037 0.00 0.00 29.51 2.67
637 657 6.206634 GGAAAATGAATATTGGTATCGGCAGA 59.793 38.462 0.00 0.00 0.00 4.26
688 708 3.624326 TCTTGAAGAAATGCAACGGTG 57.376 42.857 0.00 0.00 0.00 4.94
745 765 2.347150 GCAAACCAACCAAAAACTGTCG 59.653 45.455 0.00 0.00 0.00 4.35
747 767 4.734917 CAAACCAACCAAAAACTGTCGTA 58.265 39.130 0.00 0.00 0.00 3.43
790 813 4.703093 AGAGTCTTAGTAGTGAGTTGGAGC 59.297 45.833 0.00 0.00 0.00 4.70
802 825 1.350351 AGTTGGAGCTGAATGCAGAGT 59.650 47.619 4.31 0.00 45.17 3.24
803 826 1.736681 GTTGGAGCTGAATGCAGAGTC 59.263 52.381 4.31 0.00 45.17 3.36
805 828 2.460669 TGGAGCTGAATGCAGAGTCTA 58.539 47.619 4.31 0.00 45.17 2.59
833 856 7.435192 CACCATAAAAACAGTCCTTCTCAAAAC 59.565 37.037 0.00 0.00 0.00 2.43
858 881 8.949421 ACCTATGATGGTTTACCTTATCATCTT 58.051 33.333 14.55 4.72 38.93 2.40
1107 1130 7.290110 TGATATCATCCGTGAAGTAGTCATT 57.710 36.000 0.00 0.00 38.90 2.57
1110 1133 4.755411 TCATCCGTGAAGTAGTCATTTCC 58.245 43.478 0.00 0.00 38.90 3.13
1452 1475 2.378547 TCTGCCAGGTTCTTTGGGTAAT 59.621 45.455 0.00 0.00 36.19 1.89
1464 1487 2.174685 TGGGTAATCTGAGGCAGCTA 57.825 50.000 0.00 0.00 0.00 3.32
1516 1539 1.074405 TCAAGCTGCCAAAGACCATCT 59.926 47.619 0.00 0.00 0.00 2.90
1543 1566 3.131396 CTCAGGAAGCTACAACACGTTT 58.869 45.455 0.00 0.00 0.00 3.60
1578 1601 3.884895 TGGGAGCAACGATGAATGTATT 58.115 40.909 0.00 0.00 0.00 1.89
1604 1627 2.821437 AGAGTATCCATATGGGGTCCG 58.179 52.381 21.78 0.00 37.22 4.79
1635 1658 6.441604 TGATGAGGAATAAGCTATGCATCCTA 59.558 38.462 0.19 0.00 37.42 2.94
1670 1693 1.745115 GGTTCTGCGTGGCATGCTA 60.745 57.895 29.90 16.79 38.13 3.49
1763 1786 0.460811 TGCTGCTCGTATCTGCCAAG 60.461 55.000 0.00 0.00 0.00 3.61
1803 1826 2.192861 ACATGGTGTTGTGGTGCCG 61.193 57.895 0.00 0.00 0.00 5.69
1863 1886 2.972021 TGTGGTGAACATCTCAAGGAGA 59.028 45.455 0.00 0.00 43.20 3.71
1873 1896 2.057922 TCTCAAGGAGAAAGGCCACTT 58.942 47.619 5.01 0.00 35.59 3.16
1923 1946 1.757306 CAAGCTGGGAGTGACTGGT 59.243 57.895 0.00 0.00 0.00 4.00
1933 1956 0.389391 AGTGACTGGTGTTGACGAGG 59.611 55.000 0.00 0.00 32.39 4.63
1968 1991 4.672899 AGCTATGTTTGGCCCTTTCTAAA 58.327 39.130 0.00 0.00 0.00 1.85
2011 2034 2.203788 TGCAGTCGGAGGGGAAGT 60.204 61.111 0.00 0.00 0.00 3.01
2024 2047 2.645797 AGGGGAAGTCCGGTTTATTTGA 59.354 45.455 0.00 0.00 36.71 2.69
2025 2048 3.014623 GGGGAAGTCCGGTTTATTTGAG 58.985 50.000 0.00 0.00 36.71 3.02
2031 2054 4.901868 AGTCCGGTTTATTTGAGTGCTTA 58.098 39.130 0.00 0.00 0.00 3.09
2037 2060 5.354234 CGGTTTATTTGAGTGCTTAGATGGT 59.646 40.000 0.00 0.00 0.00 3.55
2041 2064 3.616956 TTGAGTGCTTAGATGGTCTGG 57.383 47.619 0.00 0.00 0.00 3.86
2043 2066 1.208052 GAGTGCTTAGATGGTCTGGCA 59.792 52.381 0.00 0.00 35.44 4.92
2058 2081 2.094675 CTGGCATCACCTCCGAAAAAT 58.905 47.619 0.00 0.00 40.22 1.82
2066 2089 4.968259 TCACCTCCGAAAAATCTTGAGAA 58.032 39.130 0.00 0.00 0.00 2.87
2108 2131 1.819208 TCGAATTGCCGGCATGGAG 60.819 57.895 33.25 21.75 42.00 3.86
2215 2244 0.617820 ACCGAACCTAGCCATCCTGT 60.618 55.000 0.00 0.00 0.00 4.00
2221 2250 2.672098 ACCTAGCCATCCTGTGTCTAG 58.328 52.381 0.00 0.00 0.00 2.43
2245 2274 0.319641 AGAGTCGTTCAAGGGCGAAC 60.320 55.000 0.00 0.00 41.56 3.95
2329 2361 3.560025 CCCAGGTAAGCTCAAATCTGTGT 60.560 47.826 0.00 0.00 0.00 3.72
2379 2417 2.094234 TGAGCTGCTGCAGTATTACGAA 60.094 45.455 28.50 5.80 42.74 3.85
2428 2487 6.401581 GGAAGAAGATGACGATCAGTTTGAAC 60.402 42.308 0.00 0.00 0.00 3.18
2469 2528 6.464465 GGTTATTTTCTGGGCTAGCATCTCTA 60.464 42.308 18.24 0.00 0.00 2.43
2618 2677 3.067106 ACCAACTATTGTCACTTCTGCG 58.933 45.455 0.00 0.00 0.00 5.18
2672 2731 6.518395 CACTTGTTTTGAATTCGTATGTACCG 59.482 38.462 0.04 0.00 0.00 4.02
2715 2777 2.628657 ACTAGTATTCATGTCGGCCTCC 59.371 50.000 0.00 0.00 0.00 4.30
2740 2803 7.411804 CCGCCAGTGAATTGTTTTGAATTATTC 60.412 37.037 0.00 0.00 0.00 1.75
2741 2804 7.116090 CGCCAGTGAATTGTTTTGAATTATTCA 59.884 33.333 3.20 3.20 38.04 2.57
2886 2981 7.554959 AATTGTTTCCTCCTTCACTAGTAGA 57.445 36.000 3.59 0.00 0.00 2.59
2911 3006 1.611261 CCCCACTAGTCCCGGTTGA 60.611 63.158 0.00 0.00 0.00 3.18
3004 3195 1.000171 GTTCTAACACGAACCGGGACT 60.000 52.381 6.32 0.00 37.82 3.85
3011 3255 2.656069 CGAACCGGGACTGATGGGT 61.656 63.158 6.32 0.00 0.00 4.51
3337 3789 2.421751 TCGATCGACCTCTCCTTCTT 57.578 50.000 15.15 0.00 0.00 2.52
3559 4753 1.661341 GAGTTCATTCCGCATCTGCT 58.339 50.000 0.09 0.00 39.32 4.24
3578 4974 6.920817 TCTGCTACGTCTAATTTGAAGAAGA 58.079 36.000 9.48 2.48 0.00 2.87
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 7.770801 TGATGACATAAAATACGAAGTGAGG 57.229 36.000 0.00 0.00 45.73 3.86
47 48 9.901172 AAAAACCTTAACCACTATCGAGATAAT 57.099 29.630 0.00 0.00 0.00 1.28
105 106 4.838152 AGCTACATGCACCGGCCG 62.838 66.667 21.04 21.04 45.94 6.13
106 107 2.897350 GAGCTACATGCACCGGCC 60.897 66.667 0.00 0.00 45.94 6.13
107 108 2.897350 GGAGCTACATGCACCGGC 60.897 66.667 0.00 0.00 42.21 6.13
126 127 4.785453 CCCAGACCCTCCGCAAGC 62.785 72.222 0.00 0.00 0.00 4.01
127 128 4.101448 CCCCAGACCCTCCGCAAG 62.101 72.222 0.00 0.00 0.00 4.01
128 129 4.649705 TCCCCAGACCCTCCGCAA 62.650 66.667 0.00 0.00 0.00 4.85
129 130 4.649705 TTCCCCAGACCCTCCGCA 62.650 66.667 0.00 0.00 0.00 5.69
130 131 3.787001 CTTCCCCAGACCCTCCGC 61.787 72.222 0.00 0.00 0.00 5.54
131 132 3.083997 CCTTCCCCAGACCCTCCG 61.084 72.222 0.00 0.00 0.00 4.63
132 133 2.692741 CCCTTCCCCAGACCCTCC 60.693 72.222 0.00 0.00 0.00 4.30
133 134 1.996187 GACCCTTCCCCAGACCCTC 60.996 68.421 0.00 0.00 0.00 4.30
134 135 2.125225 GACCCTTCCCCAGACCCT 59.875 66.667 0.00 0.00 0.00 4.34
135 136 3.015753 GGACCCTTCCCCAGACCC 61.016 72.222 0.00 0.00 35.57 4.46
136 137 3.400054 CGGACCCTTCCCCAGACC 61.400 72.222 0.00 0.00 38.99 3.85
137 138 2.284405 TCGGACCCTTCCCCAGAC 60.284 66.667 0.00 0.00 38.99 3.51
138 139 2.284405 GTCGGACCCTTCCCCAGA 60.284 66.667 0.00 0.00 38.99 3.86
139 140 3.400054 GGTCGGACCCTTCCCCAG 61.400 72.222 16.55 0.00 38.99 4.45
140 141 4.257810 TGGTCGGACCCTTCCCCA 62.258 66.667 23.81 0.69 38.99 4.96
141 142 3.714001 GTGGTCGGACCCTTCCCC 61.714 72.222 23.81 0.00 38.99 4.81
142 143 1.775934 AAAGTGGTCGGACCCTTCCC 61.776 60.000 23.81 7.17 38.99 3.97
143 144 0.605589 CAAAGTGGTCGGACCCTTCC 60.606 60.000 23.81 9.51 37.50 3.46
144 145 0.605589 CCAAAGTGGTCGGACCCTTC 60.606 60.000 23.81 13.97 37.50 3.46
145 146 1.454539 CCAAAGTGGTCGGACCCTT 59.545 57.895 23.81 21.08 37.50 3.95
146 147 2.526046 CCCAAAGTGGTCGGACCCT 61.526 63.158 23.81 16.82 37.50 4.34
147 148 2.033602 CCCAAAGTGGTCGGACCC 59.966 66.667 23.81 14.91 37.50 4.46
148 149 1.302271 GACCCAAAGTGGTCGGACC 60.302 63.158 20.36 20.36 44.98 4.46
149 150 4.373771 GACCCAAAGTGGTCGGAC 57.626 61.111 0.00 0.00 44.98 4.79
154 155 5.088730 TGTGTACTATAGACCCAAAGTGGT 58.911 41.667 6.78 0.00 42.79 4.16
155 156 5.661458 CTGTGTACTATAGACCCAAAGTGG 58.339 45.833 6.78 0.00 37.25 4.00
156 157 5.109903 GCTGTGTACTATAGACCCAAAGTG 58.890 45.833 6.78 0.00 0.00 3.16
157 158 4.161754 GGCTGTGTACTATAGACCCAAAGT 59.838 45.833 6.78 0.00 0.00 2.66
158 159 4.406003 AGGCTGTGTACTATAGACCCAAAG 59.594 45.833 6.78 5.48 0.00 2.77
159 160 4.359105 AGGCTGTGTACTATAGACCCAAA 58.641 43.478 6.78 0.00 0.00 3.28
160 161 3.990369 AGGCTGTGTACTATAGACCCAA 58.010 45.455 6.78 0.00 0.00 4.12
161 162 3.682592 AGGCTGTGTACTATAGACCCA 57.317 47.619 6.78 0.00 0.00 4.51
162 163 4.202233 GGAAAGGCTGTGTACTATAGACCC 60.202 50.000 6.78 0.00 0.00 4.46
163 164 4.202233 GGGAAAGGCTGTGTACTATAGACC 60.202 50.000 6.78 0.00 0.00 3.85
164 165 4.650131 AGGGAAAGGCTGTGTACTATAGAC 59.350 45.833 6.78 1.24 0.00 2.59
165 166 4.880164 AGGGAAAGGCTGTGTACTATAGA 58.120 43.478 6.78 0.00 0.00 1.98
166 167 5.597182 TGTAGGGAAAGGCTGTGTACTATAG 59.403 44.000 0.00 0.00 0.00 1.31
167 168 5.521696 TGTAGGGAAAGGCTGTGTACTATA 58.478 41.667 0.00 0.00 0.00 1.31
168 169 4.359105 TGTAGGGAAAGGCTGTGTACTAT 58.641 43.478 0.00 0.00 0.00 2.12
169 170 3.781808 TGTAGGGAAAGGCTGTGTACTA 58.218 45.455 0.00 0.00 0.00 1.82
170 171 2.616524 TGTAGGGAAAGGCTGTGTACT 58.383 47.619 0.00 0.00 0.00 2.73
171 172 3.629142 ATGTAGGGAAAGGCTGTGTAC 57.371 47.619 0.00 0.00 0.00 2.90
172 173 4.288626 AGAAATGTAGGGAAAGGCTGTGTA 59.711 41.667 0.00 0.00 0.00 2.90
173 174 3.074538 AGAAATGTAGGGAAAGGCTGTGT 59.925 43.478 0.00 0.00 0.00 3.72
174 175 3.441572 CAGAAATGTAGGGAAAGGCTGTG 59.558 47.826 0.00 0.00 0.00 3.66
175 176 3.074538 ACAGAAATGTAGGGAAAGGCTGT 59.925 43.478 0.00 0.00 0.00 4.40
176 177 3.690460 ACAGAAATGTAGGGAAAGGCTG 58.310 45.455 0.00 0.00 0.00 4.85
177 178 5.250774 TCTTACAGAAATGTAGGGAAAGGCT 59.749 40.000 0.00 0.00 0.00 4.58
178 179 5.497474 TCTTACAGAAATGTAGGGAAAGGC 58.503 41.667 0.00 0.00 0.00 4.35
179 180 6.116126 CCTCTTACAGAAATGTAGGGAAAGG 58.884 44.000 0.00 0.00 0.00 3.11
180 181 5.586643 GCCTCTTACAGAAATGTAGGGAAAG 59.413 44.000 0.00 0.00 0.00 2.62
181 182 5.250774 AGCCTCTTACAGAAATGTAGGGAAA 59.749 40.000 0.00 0.00 0.00 3.13
182 183 4.783227 AGCCTCTTACAGAAATGTAGGGAA 59.217 41.667 0.00 0.00 0.00 3.97
183 184 4.162320 CAGCCTCTTACAGAAATGTAGGGA 59.838 45.833 0.00 0.00 0.00 4.20
184 185 4.080863 ACAGCCTCTTACAGAAATGTAGGG 60.081 45.833 0.00 0.66 0.00 3.53
185 186 5.091261 ACAGCCTCTTACAGAAATGTAGG 57.909 43.478 0.00 0.00 0.00 3.18
186 187 7.173218 TGAAAACAGCCTCTTACAGAAATGTAG 59.827 37.037 0.00 0.00 0.00 2.74
187 188 6.995686 TGAAAACAGCCTCTTACAGAAATGTA 59.004 34.615 0.00 0.00 0.00 2.29
188 189 5.827797 TGAAAACAGCCTCTTACAGAAATGT 59.172 36.000 0.00 0.00 0.00 2.71
189 190 6.317789 TGAAAACAGCCTCTTACAGAAATG 57.682 37.500 0.00 0.00 0.00 2.32
190 191 5.474876 CCTGAAAACAGCCTCTTACAGAAAT 59.525 40.000 0.00 0.00 0.00 2.17
191 192 4.821805 CCTGAAAACAGCCTCTTACAGAAA 59.178 41.667 0.00 0.00 0.00 2.52
192 193 4.102524 TCCTGAAAACAGCCTCTTACAGAA 59.897 41.667 0.00 0.00 0.00 3.02
193 194 3.646162 TCCTGAAAACAGCCTCTTACAGA 59.354 43.478 0.00 0.00 0.00 3.41
194 195 3.748568 GTCCTGAAAACAGCCTCTTACAG 59.251 47.826 0.00 0.00 0.00 2.74
195 196 3.391296 AGTCCTGAAAACAGCCTCTTACA 59.609 43.478 0.00 0.00 0.00 2.41
196 197 4.009370 AGTCCTGAAAACAGCCTCTTAC 57.991 45.455 0.00 0.00 0.00 2.34
197 198 4.706842 AAGTCCTGAAAACAGCCTCTTA 57.293 40.909 0.00 0.00 0.00 2.10
198 199 3.584733 AAGTCCTGAAAACAGCCTCTT 57.415 42.857 0.00 0.00 0.00 2.85
199 200 3.217626 CAAAGTCCTGAAAACAGCCTCT 58.782 45.455 0.00 0.00 0.00 3.69
200 201 2.294512 CCAAAGTCCTGAAAACAGCCTC 59.705 50.000 0.00 0.00 0.00 4.70
201 202 2.310538 CCAAAGTCCTGAAAACAGCCT 58.689 47.619 0.00 0.00 0.00 4.58
202 203 1.269778 GCCAAAGTCCTGAAAACAGCC 60.270 52.381 0.00 0.00 0.00 4.85
203 204 1.408702 TGCCAAAGTCCTGAAAACAGC 59.591 47.619 0.00 0.00 0.00 4.40
204 205 2.544486 GCTGCCAAAGTCCTGAAAACAG 60.544 50.000 0.00 0.00 0.00 3.16
205 206 1.408702 GCTGCCAAAGTCCTGAAAACA 59.591 47.619 0.00 0.00 0.00 2.83
206 207 1.408702 TGCTGCCAAAGTCCTGAAAAC 59.591 47.619 0.00 0.00 0.00 2.43
207 208 1.682854 CTGCTGCCAAAGTCCTGAAAA 59.317 47.619 0.00 0.00 0.00 2.29
208 209 1.321474 CTGCTGCCAAAGTCCTGAAA 58.679 50.000 0.00 0.00 0.00 2.69
209 210 1.174712 GCTGCTGCCAAAGTCCTGAA 61.175 55.000 3.85 0.00 0.00 3.02
210 211 1.601759 GCTGCTGCCAAAGTCCTGA 60.602 57.895 3.85 0.00 0.00 3.86
211 212 1.177256 AAGCTGCTGCCAAAGTCCTG 61.177 55.000 12.44 0.00 40.80 3.86
212 213 0.468771 AAAGCTGCTGCCAAAGTCCT 60.469 50.000 12.44 0.00 40.80 3.85
213 214 1.068264 GTAAAGCTGCTGCCAAAGTCC 60.068 52.381 12.44 0.00 40.80 3.85
214 215 1.068264 GGTAAAGCTGCTGCCAAAGTC 60.068 52.381 12.44 0.00 40.80 3.01
215 216 0.961753 GGTAAAGCTGCTGCCAAAGT 59.038 50.000 12.44 0.00 40.80 2.66
216 217 0.961019 TGGTAAAGCTGCTGCCAAAG 59.039 50.000 12.44 0.00 40.80 2.77
217 218 0.673437 GTGGTAAAGCTGCTGCCAAA 59.327 50.000 18.18 0.00 40.80 3.28
218 219 0.178992 AGTGGTAAAGCTGCTGCCAA 60.179 50.000 18.18 0.00 40.80 4.52
219 220 0.890542 CAGTGGTAAAGCTGCTGCCA 60.891 55.000 12.44 9.80 40.80 4.92
220 221 1.878775 CAGTGGTAAAGCTGCTGCC 59.121 57.895 12.44 7.07 40.80 4.85
225 226 1.514678 TTGGCGCAGTGGTAAAGCTG 61.515 55.000 10.83 0.00 35.93 4.24
226 227 1.228124 TTGGCGCAGTGGTAAAGCT 60.228 52.632 10.83 0.00 0.00 3.74
227 228 1.210155 CTTGGCGCAGTGGTAAAGC 59.790 57.895 10.83 0.00 0.00 3.51
228 229 1.875963 CCTTGGCGCAGTGGTAAAG 59.124 57.895 10.83 0.71 0.00 1.85
229 230 2.265182 GCCTTGGCGCAGTGGTAAA 61.265 57.895 10.83 0.00 0.00 2.01
230 231 2.671619 GCCTTGGCGCAGTGGTAA 60.672 61.111 10.83 0.00 0.00 2.85
231 232 3.605749 GAGCCTTGGCGCAGTGGTA 62.606 63.158 10.83 0.00 0.00 3.25
239 240 1.910580 TAAGAAGGGGAGCCTTGGCG 61.911 60.000 5.95 0.00 0.00 5.69
240 241 0.331616 TTAAGAAGGGGAGCCTTGGC 59.668 55.000 2.97 2.97 0.00 4.52
241 242 3.388552 AATTAAGAAGGGGAGCCTTGG 57.611 47.619 0.00 0.00 0.00 3.61
242 243 6.836007 AGATAAAATTAAGAAGGGGAGCCTTG 59.164 38.462 0.00 0.00 0.00 3.61
243 244 6.986391 AGATAAAATTAAGAAGGGGAGCCTT 58.014 36.000 0.00 0.00 0.00 4.35
244 245 6.598427 AGATAAAATTAAGAAGGGGAGCCT 57.402 37.500 0.00 0.00 0.00 4.58
245 246 7.287810 TGTAGATAAAATTAAGAAGGGGAGCC 58.712 38.462 0.00 0.00 0.00 4.70
246 247 8.747538 TTGTAGATAAAATTAAGAAGGGGAGC 57.252 34.615 0.00 0.00 0.00 4.70
288 289 9.959749 GAAATGTGGAAAACAGACAAGTTTATA 57.040 29.630 0.00 0.00 43.64 0.98
289 290 8.474025 TGAAATGTGGAAAACAGACAAGTTTAT 58.526 29.630 0.00 0.00 43.64 1.40
290 291 7.831753 TGAAATGTGGAAAACAGACAAGTTTA 58.168 30.769 0.00 0.00 43.64 2.01
291 292 6.696411 TGAAATGTGGAAAACAGACAAGTTT 58.304 32.000 0.00 0.00 43.64 2.66
292 293 6.071391 ACTGAAATGTGGAAAACAGACAAGTT 60.071 34.615 0.00 0.00 43.64 2.66
293 294 5.418840 ACTGAAATGTGGAAAACAGACAAGT 59.581 36.000 0.00 0.00 43.64 3.16
294 295 5.894807 ACTGAAATGTGGAAAACAGACAAG 58.105 37.500 0.00 0.00 43.64 3.16
295 296 5.913137 ACTGAAATGTGGAAAACAGACAA 57.087 34.783 0.00 0.00 43.64 3.18
296 297 5.184864 ACAACTGAAATGTGGAAAACAGACA 59.815 36.000 0.00 0.00 43.64 3.41
297 298 5.650543 ACAACTGAAATGTGGAAAACAGAC 58.349 37.500 0.00 0.00 43.64 3.51
298 299 5.913137 ACAACTGAAATGTGGAAAACAGA 57.087 34.783 0.00 0.00 43.64 3.41
299 300 6.589523 TCAAACAACTGAAATGTGGAAAACAG 59.410 34.615 0.00 0.00 43.64 3.16
300 301 6.459066 TCAAACAACTGAAATGTGGAAAACA 58.541 32.000 0.00 0.00 44.79 2.83
301 302 6.959671 TCAAACAACTGAAATGTGGAAAAC 57.040 33.333 0.00 0.00 0.00 2.43
302 303 8.558973 AATTCAAACAACTGAAATGTGGAAAA 57.441 26.923 0.00 0.00 38.75 2.29
303 304 8.558973 AAATTCAAACAACTGAAATGTGGAAA 57.441 26.923 0.00 0.00 38.75 3.13
304 305 7.821359 TGAAATTCAAACAACTGAAATGTGGAA 59.179 29.630 0.00 0.00 38.75 3.53
305 306 7.326454 TGAAATTCAAACAACTGAAATGTGGA 58.674 30.769 0.00 0.00 38.75 4.02
306 307 7.536895 TGAAATTCAAACAACTGAAATGTGG 57.463 32.000 0.00 0.00 38.75 4.17
307 308 9.991388 AAATGAAATTCAAACAACTGAAATGTG 57.009 25.926 0.00 0.00 38.75 3.21
379 380 4.591202 CGCAATGTTCAAAATCGCTAGAT 58.409 39.130 0.00 0.00 39.12 1.98
380 381 3.727673 GCGCAATGTTCAAAATCGCTAGA 60.728 43.478 0.30 0.00 38.29 2.43
381 382 2.527487 GCGCAATGTTCAAAATCGCTAG 59.473 45.455 0.30 0.00 38.29 3.42
382 383 2.095516 TGCGCAATGTTCAAAATCGCTA 60.096 40.909 8.16 0.00 41.38 4.26
383 384 1.335780 TGCGCAATGTTCAAAATCGCT 60.336 42.857 8.16 0.00 41.38 4.93
384 385 1.058129 CTGCGCAATGTTCAAAATCGC 59.942 47.619 13.05 0.00 41.22 4.58
385 386 2.583739 TCTGCGCAATGTTCAAAATCG 58.416 42.857 13.05 0.00 0.00 3.34
386 387 4.722908 GCAATCTGCGCAATGTTCAAAATC 60.723 41.667 13.05 0.00 31.71 2.17
387 388 3.123959 GCAATCTGCGCAATGTTCAAAAT 59.876 39.130 13.05 0.00 31.71 1.82
388 389 2.475864 GCAATCTGCGCAATGTTCAAAA 59.524 40.909 13.05 0.00 31.71 2.44
389 390 2.060284 GCAATCTGCGCAATGTTCAAA 58.940 42.857 13.05 0.00 31.71 2.69
390 391 1.700523 GCAATCTGCGCAATGTTCAA 58.299 45.000 13.05 0.00 31.71 2.69
391 392 3.404978 GCAATCTGCGCAATGTTCA 57.595 47.368 13.05 0.00 31.71 3.18
401 402 0.994263 GGTTTCGCAATGCAATCTGC 59.006 50.000 5.91 8.35 45.29 4.26
402 403 2.350899 TGGTTTCGCAATGCAATCTG 57.649 45.000 5.91 0.00 0.00 2.90
403 404 3.383620 TTTGGTTTCGCAATGCAATCT 57.616 38.095 5.91 0.00 0.00 2.40
404 405 4.396519 CAATTTGGTTTCGCAATGCAATC 58.603 39.130 5.91 0.00 0.00 2.67
405 406 3.365164 GCAATTTGGTTTCGCAATGCAAT 60.365 39.130 5.91 0.00 0.00 3.56
406 407 2.032204 GCAATTTGGTTTCGCAATGCAA 60.032 40.909 5.91 0.00 0.00 4.08
407 408 1.530293 GCAATTTGGTTTCGCAATGCA 59.470 42.857 5.91 0.00 0.00 3.96
408 409 1.799994 AGCAATTTGGTTTCGCAATGC 59.200 42.857 0.00 0.00 0.00 3.56
409 410 5.783100 AATAGCAATTTGGTTTCGCAATG 57.217 34.783 6.39 0.00 0.00 2.82
410 411 6.799926 AAAATAGCAATTTGGTTTCGCAAT 57.200 29.167 6.39 0.00 35.46 3.56
411 412 7.897575 ATAAAATAGCAATTTGGTTTCGCAA 57.102 28.000 6.39 0.00 35.46 4.85
412 413 7.897575 AATAAAATAGCAATTTGGTTTCGCA 57.102 28.000 6.39 0.00 35.46 5.10
436 437 9.878599 GAGATGAAGTTCGAAACTGAAAATAAA 57.121 29.630 0.00 0.00 41.91 1.40
437 438 9.273016 AGAGATGAAGTTCGAAACTGAAAATAA 57.727 29.630 0.00 0.00 41.91 1.40
438 439 8.833231 AGAGATGAAGTTCGAAACTGAAAATA 57.167 30.769 0.00 0.00 41.91 1.40
439 440 7.659390 AGAGAGATGAAGTTCGAAACTGAAAAT 59.341 33.333 0.00 0.00 41.91 1.82
440 441 6.986817 AGAGAGATGAAGTTCGAAACTGAAAA 59.013 34.615 0.00 0.00 41.91 2.29
441 442 6.516718 AGAGAGATGAAGTTCGAAACTGAAA 58.483 36.000 0.00 0.00 41.91 2.69
442 443 6.015856 AGAGAGAGATGAAGTTCGAAACTGAA 60.016 38.462 0.00 0.00 41.91 3.02
443 444 5.475220 AGAGAGAGATGAAGTTCGAAACTGA 59.525 40.000 0.00 0.00 41.91 3.41
444 445 5.708948 AGAGAGAGATGAAGTTCGAAACTG 58.291 41.667 0.00 0.00 41.91 3.16
445 446 5.710099 AGAGAGAGAGATGAAGTTCGAAACT 59.290 40.000 0.00 0.00 45.46 2.66
446 447 5.949735 AGAGAGAGAGATGAAGTTCGAAAC 58.050 41.667 0.00 0.00 0.00 2.78
447 448 5.943416 AGAGAGAGAGAGATGAAGTTCGAAA 59.057 40.000 0.00 0.00 0.00 3.46
448 449 5.496556 AGAGAGAGAGAGATGAAGTTCGAA 58.503 41.667 0.00 0.00 0.00 3.71
449 450 5.097742 AGAGAGAGAGAGATGAAGTTCGA 57.902 43.478 0.00 0.00 0.00 3.71
450 451 5.118990 AGAGAGAGAGAGAGATGAAGTTCG 58.881 45.833 0.00 0.00 0.00 3.95
468 469 5.009911 CAGAGAGAGAGAGAGAGAGAGAGAG 59.990 52.000 0.00 0.00 0.00 3.20
476 477 1.935873 CACGCAGAGAGAGAGAGAGAG 59.064 57.143 0.00 0.00 0.00 3.20
484 485 0.031314 ACACACACACGCAGAGAGAG 59.969 55.000 0.00 0.00 0.00 3.20
492 493 1.201578 CACGATCACACACACACGC 59.798 57.895 0.00 0.00 0.00 5.34
493 494 1.201578 GCACGATCACACACACACG 59.798 57.895 0.00 0.00 0.00 4.49
494 495 1.201578 CGCACGATCACACACACAC 59.798 57.895 0.00 0.00 0.00 3.82
495 496 2.594048 GCGCACGATCACACACACA 61.594 57.895 0.30 0.00 0.00 3.72
499 500 0.179086 ATATGGCGCACGATCACACA 60.179 50.000 10.83 0.00 0.00 3.72
502 503 0.319900 AGGATATGGCGCACGATCAC 60.320 55.000 10.83 2.83 0.00 3.06
503 504 1.202348 CTAGGATATGGCGCACGATCA 59.798 52.381 10.83 0.00 0.00 2.92
504 505 1.469940 CCTAGGATATGGCGCACGATC 60.470 57.143 10.83 7.95 0.00 3.69
505 506 0.532573 CCTAGGATATGGCGCACGAT 59.467 55.000 10.83 0.00 0.00 3.73
506 507 1.964448 CCTAGGATATGGCGCACGA 59.036 57.895 10.83 0.00 0.00 4.35
507 508 1.738099 GCCTAGGATATGGCGCACG 60.738 63.158 14.75 0.00 39.71 5.34
508 509 4.285851 GCCTAGGATATGGCGCAC 57.714 61.111 14.75 0.00 39.71 5.34
514 515 4.214119 CCAACGATGTTTGCCTAGGATATG 59.786 45.833 14.75 0.00 0.00 1.78
523 524 5.092781 CAGTAATAACCAACGATGTTTGCC 58.907 41.667 0.00 0.00 0.00 4.52
637 657 4.828939 TGCTTGTTCAATCAACTCAGGATT 59.171 37.500 0.00 0.00 35.79 3.01
688 708 2.682856 TGGCGATTATTGCAAGAGGAAC 59.317 45.455 4.94 0.00 0.00 3.62
745 765 6.692486 TCTCATTCAGTTTTCTCCACTCTAC 58.308 40.000 0.00 0.00 0.00 2.59
747 767 5.306678 ACTCTCATTCAGTTTTCTCCACTCT 59.693 40.000 0.00 0.00 0.00 3.24
790 813 3.930336 TGGTGTTAGACTCTGCATTCAG 58.070 45.455 0.00 0.00 41.67 3.02
802 825 7.514721 AGAAGGACTGTTTTTATGGTGTTAGA 58.485 34.615 0.00 0.00 0.00 2.10
803 826 7.444183 TGAGAAGGACTGTTTTTATGGTGTTAG 59.556 37.037 0.00 0.00 0.00 2.34
805 828 6.126409 TGAGAAGGACTGTTTTTATGGTGTT 58.874 36.000 0.00 0.00 0.00 3.32
849 872 8.635765 ACAAGAAACAAGCCTTAAGATGATAA 57.364 30.769 3.36 0.00 0.00 1.75
858 881 4.700213 GCCAGATACAAGAAACAAGCCTTA 59.300 41.667 0.00 0.00 0.00 2.69
986 1009 4.081420 TGAGGTCCATGAAGTAGCTTTCTC 60.081 45.833 0.00 0.00 0.00 2.87
1107 1130 3.893753 TTTTCCTCCATGGACTTGGAA 57.106 42.857 23.60 23.60 45.03 3.53
1110 1133 4.768968 ACAAGATTTTCCTCCATGGACTTG 59.231 41.667 25.88 25.88 46.14 3.16
1278 1301 3.380637 CAGAAATGAAGAATGGCCTCCAG 59.619 47.826 3.32 0.00 36.75 3.86
1452 1475 0.891373 GTGTCTGTAGCTGCCTCAGA 59.109 55.000 16.53 16.53 36.12 3.27
1578 1601 6.443849 GGACCCCATATGGATACTCTTGATAA 59.556 42.308 24.00 0.00 37.39 1.75
1594 1617 0.399949 ATCAGCTTCCGGACCCCATA 60.400 55.000 1.83 0.00 0.00 2.74
1604 1627 4.084011 AGCTTATTCCTCATCAGCTTCC 57.916 45.455 0.00 0.00 39.09 3.46
1635 1658 2.757077 CCCGCCAAGGAGGAAGTT 59.243 61.111 10.72 0.00 45.00 2.66
1674 1697 1.620819 GTCTCCTTCAGAAGCTGTGGA 59.379 52.381 4.41 0.00 35.44 4.02
1787 1810 1.600636 CTCGGCACCACAACACCAT 60.601 57.895 0.00 0.00 0.00 3.55
1803 1826 0.689080 TGAGCCTGTGGATCCCTCTC 60.689 60.000 9.90 8.78 37.30 3.20
1863 1886 0.890996 CCTCTCGCAAAGTGGCCTTT 60.891 55.000 3.32 0.00 41.62 3.11
1873 1896 3.064987 GCCTCGCTACCTCTCGCAA 62.065 63.158 0.00 0.00 0.00 4.85
1902 1925 2.210013 AGTCACTCCCAGCTTGCGA 61.210 57.895 0.00 0.00 0.00 5.10
1923 1946 1.338674 CCACTATTGCCCTCGTCAACA 60.339 52.381 0.00 0.00 0.00 3.33
1933 1956 3.760580 ACATAGCTCTCCACTATTGCC 57.239 47.619 0.00 0.00 0.00 4.52
1968 1991 1.366319 ATGTTTCCAGGGAGCTGAGT 58.634 50.000 0.00 0.00 0.00 3.41
2011 2034 5.155278 TCTAAGCACTCAAATAAACCGGA 57.845 39.130 9.46 0.00 0.00 5.14
2024 2047 1.279496 TGCCAGACCATCTAAGCACT 58.721 50.000 0.00 0.00 32.23 4.40
2025 2048 2.216898 GATGCCAGACCATCTAAGCAC 58.783 52.381 5.20 0.00 37.64 4.40
2031 2054 0.835941 GAGGTGATGCCAGACCATCT 59.164 55.000 0.00 0.00 41.65 2.90
2037 2060 0.690192 TTTTCGGAGGTGATGCCAGA 59.310 50.000 0.00 0.00 40.61 3.86
2041 2064 3.440173 TCAAGATTTTTCGGAGGTGATGC 59.560 43.478 0.00 0.00 0.00 3.91
2043 2066 5.165961 TCTCAAGATTTTTCGGAGGTGAT 57.834 39.130 0.00 0.00 0.00 3.06
2058 2081 3.305403 CGTACAGCTTCAGGTTCTCAAGA 60.305 47.826 0.00 0.00 0.00 3.02
2066 2089 0.602905 GTTGCCGTACAGCTTCAGGT 60.603 55.000 2.20 0.00 0.00 4.00
2108 2131 2.048603 AGATTTTCCAGCCTGCCGC 61.049 57.895 0.00 0.00 37.98 6.53
2113 2139 0.114954 TTGGCCAGATTTTCCAGCCT 59.885 50.000 5.11 0.00 44.19 4.58
2119 2148 2.673326 GCTTGAGCTTGGCCAGATTTTC 60.673 50.000 5.11 1.65 38.21 2.29
2215 2244 3.493334 TGAACGACTCTTTCCCTAGACA 58.507 45.455 0.00 0.00 0.00 3.41
2221 2250 1.809684 CCCTTGAACGACTCTTTCCC 58.190 55.000 0.00 0.00 0.00 3.97
2245 2274 2.686915 GCTGGAAATGAAGATGGACCTG 59.313 50.000 0.00 0.00 0.00 4.00
2329 2361 1.032014 GCTGCTCCCTTGTCAAAACA 58.968 50.000 0.00 0.00 0.00 2.83
2390 2446 5.871524 TCATCTTCTTCCGAAATGACTTCTG 59.128 40.000 0.00 0.00 31.20 3.02
2428 2487 3.458653 CCAAACACTGGGGGCTTG 58.541 61.111 0.00 0.00 42.17 4.01
2469 2528 1.777272 ACAACTTCCTTGAGGCTTCCT 59.223 47.619 0.00 0.00 36.03 3.36
2618 2677 6.208644 ACAGCAGAAACAACAAATGATACAC 58.791 36.000 0.00 0.00 0.00 2.90
2672 2731 3.118629 TCAGCTGACATGACCTCAATACC 60.119 47.826 13.74 0.00 0.00 2.73
2715 2777 6.949578 ATAATTCAAAACAATTCACTGGCG 57.050 33.333 0.00 0.00 0.00 5.69
2767 2832 6.458342 CGACAAATAATTGGGAGGAGTTAAGC 60.458 42.308 0.00 0.00 41.01 3.09
2827 2922 9.774413 TTAAGAAGTTTAGACGGAAAAGAGATT 57.226 29.630 0.00 0.00 0.00 2.40
2911 3006 0.033503 CCGGGACAAAAGGCCCTAAT 60.034 55.000 4.64 0.00 42.40 1.73
2931 3026 3.258622 ACTCTTTAGTCCCGGTTCAAGAG 59.741 47.826 17.85 17.85 41.95 2.85
2966 3061 3.011032 AGAACCGGGACTAAAGGTCTAGA 59.989 47.826 6.32 0.00 43.97 2.43
3004 3195 2.954684 GCCACGTGGAGACCCATCA 61.955 63.158 38.30 0.00 45.68 3.07
3337 3789 3.459145 TGTTGTTCGACCAATCTTTCGA 58.541 40.909 0.00 0.00 42.35 3.71
3429 3885 6.446318 TGTGGAAGTTGATTTCAAATGCTAC 58.554 36.000 7.93 7.93 40.11 3.58
3559 4753 6.600882 ACCCTCTTCTTCAAATTAGACGTA 57.399 37.500 0.00 0.00 0.00 3.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.