Multiple sequence alignment - TraesCS4A01G397300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G397300 chr4A 100.000 3203 0 0 1 3203 672516113 672519315 0.000000e+00 5915
1 TraesCS4A01G397300 chr4A 82.614 1645 231 31 528 2163 669921943 669920345 0.000000e+00 1402
2 TraesCS4A01G397300 chr4A 79.371 1939 341 42 714 2619 672408899 672410811 0.000000e+00 1310
3 TraesCS4A01G397300 chr4A 85.679 1229 158 12 937 2163 669993681 669992469 0.000000e+00 1279
4 TraesCS4A01G397300 chr4A 85.016 1228 157 18 952 2163 672319347 672320563 0.000000e+00 1223
5 TraesCS4A01G397300 chr4A 82.663 1367 200 19 792 2154 672000652 672001985 0.000000e+00 1177
6 TraesCS4A01G397300 chr4A 91.667 312 26 0 1850 2161 672197348 672197659 1.760000e-117 433
7 TraesCS4A01G397300 chr4A 82.957 399 48 8 264 657 672196915 672197298 3.060000e-90 342
8 TraesCS4A01G397300 chr4A 79.215 433 65 15 486 909 669994339 669993923 8.750000e-71 278
9 TraesCS4A01G397300 chr4A 95.597 159 3 1 1 155 32642083 32642241 5.300000e-63 252
10 TraesCS4A01G397300 chr4A 82.734 278 30 9 693 961 672319057 672319325 6.910000e-57 231
11 TraesCS4A01G397300 chr7D 85.257 1499 190 18 674 2163 54373342 54371866 0.000000e+00 1515
12 TraesCS4A01G397300 chr7D 81.828 1805 246 45 398 2161 55555372 55557135 0.000000e+00 1441
13 TraesCS4A01G397300 chr7D 83.621 1215 178 12 938 2148 55487206 55488403 0.000000e+00 1122
14 TraesCS4A01G397300 chr7D 80.246 1463 255 26 722 2163 55784951 55786400 0.000000e+00 1070
15 TraesCS4A01G397300 chr7D 83.773 758 109 10 1231 1980 55586750 55585999 0.000000e+00 706
16 TraesCS4A01G397300 chr7D 82.944 557 64 17 2668 3203 538660601 538660055 1.040000e-129 473
17 TraesCS4A01G397300 chr7D 90.705 312 27 1 1850 2161 55648887 55649196 6.390000e-112 414
18 TraesCS4A01G397300 chr7D 82.282 412 67 5 953 1363 56419391 56419797 5.080000e-93 351
19 TraesCS4A01G397300 chr7D 78.794 481 64 24 151 601 55447322 55447794 4.040000e-74 289
20 TraesCS4A01G397300 chr7D 78.960 423 51 21 2665 3059 28335075 28335487 1.470000e-63 254
21 TraesCS4A01G397300 chr7D 78.250 400 43 11 264 657 55648476 55648837 1.930000e-52 217
22 TraesCS4A01G397300 chr7D 83.237 173 20 3 2168 2332 55585062 55584891 1.990000e-32 150
23 TraesCS4A01G397300 chr7A 85.361 970 131 7 1196 2163 57890108 57889148 0.000000e+00 994
24 TraesCS4A01G397300 chr7A 85.379 725 97 6 952 1671 59433086 59433806 0.000000e+00 743
25 TraesCS4A01G397300 chr7A 73.529 1462 333 44 724 2163 58990583 58989154 1.030000e-139 507
26 TraesCS4A01G397300 chr7A 100.000 136 0 0 1 136 209405348 209405483 5.300000e-63 252
27 TraesCS4A01G397300 chr7A 86.093 151 12 5 816 961 59432920 59433066 1.540000e-33 154
28 TraesCS4A01G397300 chrUn 84.694 588 65 19 1574 2154 284725219 284725788 6.000000e-157 564
29 TraesCS4A01G397300 chrUn 82.406 557 66 21 2666 3203 55795252 55794709 1.050000e-124 457
30 TraesCS4A01G397300 chr5B 84.865 555 59 15 2668 3203 575980533 575981081 1.310000e-148 536
31 TraesCS4A01G397300 chr5B 82.353 561 62 22 2668 3200 691472266 691472817 1.350000e-123 453
32 TraesCS4A01G397300 chr5B 100.000 137 0 0 1 137 592119941 592120077 1.470000e-63 254
33 TraesCS4A01G397300 chr5B 100.000 136 0 0 1 136 248767530 248767665 5.300000e-63 252
34 TraesCS4A01G397300 chr5B 78.248 331 46 13 2665 2974 411912985 411912660 4.220000e-44 189
35 TraesCS4A01G397300 chr2B 85.102 537 51 14 2688 3202 550395258 550394729 3.660000e-144 521
36 TraesCS4A01G397300 chr2B 82.883 555 57 24 2678 3203 781159879 781160424 6.260000e-127 464
37 TraesCS4A01G397300 chr2B 99.286 140 0 1 1 140 10185201 10185063 5.300000e-63 252
38 TraesCS4A01G397300 chr2B 100.000 136 0 0 1 136 10185908 10186043 5.300000e-63 252
39 TraesCS4A01G397300 chr2B 99.275 138 1 0 1 138 109133786 109133649 1.910000e-62 250
40 TraesCS4A01G397300 chr3B 83.750 560 59 17 2668 3203 557105322 557105873 4.770000e-138 501
41 TraesCS4A01G397300 chr3B 81.002 579 56 22 2666 3203 43322266 43321701 8.270000e-111 411
42 TraesCS4A01G397300 chr3B 80.885 565 70 25 2666 3203 687749423 687749976 8.270000e-111 411
43 TraesCS4A01G397300 chr7B 83.242 549 64 16 2673 3201 126535015 126534475 2.240000e-131 479
44 TraesCS4A01G397300 chr7B 83.521 534 63 12 2688 3203 83990383 83989857 2.890000e-130 475
45 TraesCS4A01G397300 chr7B 84.407 295 23 11 2664 2941 426536379 426536667 5.270000e-68 268
46 TraesCS4A01G397300 chr6B 81.738 564 70 14 2669 3203 611497615 611498174 1.050000e-119 440
47 TraesCS4A01G397300 chr2D 81.514 568 48 21 2668 3203 459807036 459806494 6.390000e-112 414
48 TraesCS4A01G397300 chr3A 79.685 571 75 19 2660 3201 711097100 711097658 1.080000e-99 374
49 TraesCS4A01G397300 chr1B 100.000 136 0 0 1 136 375808547 375808682 5.300000e-63 252
50 TraesCS4A01G397300 chr1A 100.000 136 0 0 1 136 97803846 97803711 5.300000e-63 252


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G397300 chr4A 672516113 672519315 3202 False 5915.0 5915 100.0000 1 3203 1 chr4A.!!$F4 3202
1 TraesCS4A01G397300 chr4A 669920345 669921943 1598 True 1402.0 1402 82.6140 528 2163 1 chr4A.!!$R1 1635
2 TraesCS4A01G397300 chr4A 672408899 672410811 1912 False 1310.0 1310 79.3710 714 2619 1 chr4A.!!$F3 1905
3 TraesCS4A01G397300 chr4A 672000652 672001985 1333 False 1177.0 1177 82.6630 792 2154 1 chr4A.!!$F2 1362
4 TraesCS4A01G397300 chr4A 669992469 669994339 1870 True 778.5 1279 82.4470 486 2163 2 chr4A.!!$R2 1677
5 TraesCS4A01G397300 chr4A 672319057 672320563 1506 False 727.0 1223 83.8750 693 2163 2 chr4A.!!$F6 1470
6 TraesCS4A01G397300 chr4A 672196915 672197659 744 False 387.5 433 87.3120 264 2161 2 chr4A.!!$F5 1897
7 TraesCS4A01G397300 chr7D 54371866 54373342 1476 True 1515.0 1515 85.2570 674 2163 1 chr7D.!!$R1 1489
8 TraesCS4A01G397300 chr7D 55555372 55557135 1763 False 1441.0 1441 81.8280 398 2161 1 chr7D.!!$F4 1763
9 TraesCS4A01G397300 chr7D 55487206 55488403 1197 False 1122.0 1122 83.6210 938 2148 1 chr7D.!!$F3 1210
10 TraesCS4A01G397300 chr7D 55784951 55786400 1449 False 1070.0 1070 80.2460 722 2163 1 chr7D.!!$F5 1441
11 TraesCS4A01G397300 chr7D 538660055 538660601 546 True 473.0 473 82.9440 2668 3203 1 chr7D.!!$R2 535
12 TraesCS4A01G397300 chr7D 55584891 55586750 1859 True 428.0 706 83.5050 1231 2332 2 chr7D.!!$R3 1101
13 TraesCS4A01G397300 chr7D 55648476 55649196 720 False 315.5 414 84.4775 264 2161 2 chr7D.!!$F7 1897
14 TraesCS4A01G397300 chr7A 57889148 57890108 960 True 994.0 994 85.3610 1196 2163 1 chr7A.!!$R1 967
15 TraesCS4A01G397300 chr7A 58989154 58990583 1429 True 507.0 507 73.5290 724 2163 1 chr7A.!!$R2 1439
16 TraesCS4A01G397300 chr7A 59432920 59433806 886 False 448.5 743 85.7360 816 1671 2 chr7A.!!$F2 855
17 TraesCS4A01G397300 chrUn 284725219 284725788 569 False 564.0 564 84.6940 1574 2154 1 chrUn.!!$F1 580
18 TraesCS4A01G397300 chrUn 55794709 55795252 543 True 457.0 457 82.4060 2666 3203 1 chrUn.!!$R1 537
19 TraesCS4A01G397300 chr5B 575980533 575981081 548 False 536.0 536 84.8650 2668 3203 1 chr5B.!!$F2 535
20 TraesCS4A01G397300 chr5B 691472266 691472817 551 False 453.0 453 82.3530 2668 3200 1 chr5B.!!$F4 532
21 TraesCS4A01G397300 chr2B 550394729 550395258 529 True 521.0 521 85.1020 2688 3202 1 chr2B.!!$R3 514
22 TraesCS4A01G397300 chr2B 781159879 781160424 545 False 464.0 464 82.8830 2678 3203 1 chr2B.!!$F2 525
23 TraesCS4A01G397300 chr3B 557105322 557105873 551 False 501.0 501 83.7500 2668 3203 1 chr3B.!!$F1 535
24 TraesCS4A01G397300 chr3B 43321701 43322266 565 True 411.0 411 81.0020 2666 3203 1 chr3B.!!$R1 537
25 TraesCS4A01G397300 chr3B 687749423 687749976 553 False 411.0 411 80.8850 2666 3203 1 chr3B.!!$F2 537
26 TraesCS4A01G397300 chr7B 126534475 126535015 540 True 479.0 479 83.2420 2673 3201 1 chr7B.!!$R2 528
27 TraesCS4A01G397300 chr7B 83989857 83990383 526 True 475.0 475 83.5210 2688 3203 1 chr7B.!!$R1 515
28 TraesCS4A01G397300 chr6B 611497615 611498174 559 False 440.0 440 81.7380 2669 3203 1 chr6B.!!$F1 534
29 TraesCS4A01G397300 chr2D 459806494 459807036 542 True 414.0 414 81.5140 2668 3203 1 chr2D.!!$R1 535
30 TraesCS4A01G397300 chr3A 711097100 711097658 558 False 374.0 374 79.6850 2660 3201 1 chr3A.!!$F1 541

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
549 553 0.174845 CTGATGTTGGGCCATTGCAG 59.825 55.0 7.26 9.38 40.13 4.41 F
1047 1372 0.539051 CAGATCTCCTGCCCGAACTT 59.461 55.0 0.00 0.00 35.89 2.66 F
1895 2251 0.179034 GAGCCTTGCCGATGGAGAAT 60.179 55.0 0.00 0.00 0.00 2.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1895 2251 0.036732 GCCACCCAACTCACTGATCA 59.963 55.000 0.00 0.0 0.0 2.92 R
2065 3120 0.183731 GGTGTGATCCTCCCATTCCC 59.816 60.000 0.00 0.0 0.0 3.97 R
2725 3852 2.125269 AGGCCGATTTTAGCGCGT 60.125 55.556 8.43 0.0 0.0 6.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.477899 CAAATCGGGCTCTTTTCAGAC 57.522 47.619 0.00 0.00 0.00 3.51
21 22 3.077359 CAAATCGGGCTCTTTTCAGACT 58.923 45.455 0.00 0.00 0.00 3.24
22 23 3.425162 AATCGGGCTCTTTTCAGACTT 57.575 42.857 0.00 0.00 0.00 3.01
23 24 2.169832 TCGGGCTCTTTTCAGACTTG 57.830 50.000 0.00 0.00 0.00 3.16
24 25 1.160137 CGGGCTCTTTTCAGACTTGG 58.840 55.000 0.00 0.00 0.00 3.61
25 26 1.543429 CGGGCTCTTTTCAGACTTGGT 60.543 52.381 0.00 0.00 0.00 3.67
26 27 2.289444 CGGGCTCTTTTCAGACTTGGTA 60.289 50.000 0.00 0.00 0.00 3.25
27 28 3.339141 GGGCTCTTTTCAGACTTGGTAG 58.661 50.000 0.00 0.00 0.00 3.18
28 29 3.244596 GGGCTCTTTTCAGACTTGGTAGT 60.245 47.826 0.00 0.00 37.31 2.73
29 30 4.390264 GGCTCTTTTCAGACTTGGTAGTT 58.610 43.478 0.00 0.00 33.84 2.24
30 31 4.822350 GGCTCTTTTCAGACTTGGTAGTTT 59.178 41.667 0.00 0.00 33.84 2.66
31 32 5.299531 GGCTCTTTTCAGACTTGGTAGTTTT 59.700 40.000 0.00 0.00 33.84 2.43
32 33 6.183360 GGCTCTTTTCAGACTTGGTAGTTTTT 60.183 38.462 0.00 0.00 33.84 1.94
50 51 4.467198 TTTTTGCCACGGTTTAGGAAAA 57.533 36.364 0.00 0.00 30.47 2.29
51 52 4.467198 TTTTGCCACGGTTTAGGAAAAA 57.533 36.364 0.00 0.00 39.53 1.94
75 76 4.861665 CGGTAGTTTTTCGCACAAAATC 57.138 40.909 0.00 0.00 0.00 2.17
76 77 3.356658 CGGTAGTTTTTCGCACAAAATCG 59.643 43.478 0.00 0.00 0.00 3.34
77 78 4.284485 GGTAGTTTTTCGCACAAAATCGT 58.716 39.130 0.00 0.00 0.00 3.73
78 79 5.442402 GGTAGTTTTTCGCACAAAATCGTA 58.558 37.500 0.00 0.00 0.00 3.43
79 80 5.908499 GGTAGTTTTTCGCACAAAATCGTAA 59.092 36.000 0.00 0.00 0.00 3.18
80 81 6.414402 GGTAGTTTTTCGCACAAAATCGTAAA 59.586 34.615 0.00 0.00 0.00 2.01
81 82 6.490877 AGTTTTTCGCACAAAATCGTAAAG 57.509 33.333 0.00 0.00 0.00 1.85
82 83 6.031471 AGTTTTTCGCACAAAATCGTAAAGT 58.969 32.000 0.00 0.00 0.00 2.66
83 84 5.858159 TTTTCGCACAAAATCGTAAAGTG 57.142 34.783 0.00 0.00 0.00 3.16
84 85 3.529634 TCGCACAAAATCGTAAAGTGG 57.470 42.857 0.00 0.00 0.00 4.00
85 86 2.873472 TCGCACAAAATCGTAAAGTGGT 59.127 40.909 0.00 0.00 0.00 4.16
86 87 4.056740 TCGCACAAAATCGTAAAGTGGTA 58.943 39.130 0.00 0.00 0.00 3.25
87 88 4.150980 TCGCACAAAATCGTAAAGTGGTAG 59.849 41.667 0.00 0.00 0.00 3.18
88 89 4.084223 CGCACAAAATCGTAAAGTGGTAGT 60.084 41.667 0.00 0.00 0.00 2.73
89 90 5.559417 CGCACAAAATCGTAAAGTGGTAGTT 60.559 40.000 0.00 0.00 0.00 2.24
90 91 6.203647 GCACAAAATCGTAAAGTGGTAGTTT 58.796 36.000 0.00 0.00 0.00 2.66
91 92 6.693978 GCACAAAATCGTAAAGTGGTAGTTTT 59.306 34.615 0.00 0.00 0.00 2.43
92 93 7.221259 GCACAAAATCGTAAAGTGGTAGTTTTT 59.779 33.333 0.00 0.00 0.00 1.94
93 94 8.739461 CACAAAATCGTAAAGTGGTAGTTTTTC 58.261 33.333 0.00 0.00 0.00 2.29
94 95 7.641020 ACAAAATCGTAAAGTGGTAGTTTTTCG 59.359 33.333 0.00 0.00 0.00 3.46
95 96 6.849588 AATCGTAAAGTGGTAGTTTTTCGT 57.150 33.333 0.00 0.00 0.00 3.85
96 97 5.888412 TCGTAAAGTGGTAGTTTTTCGTC 57.112 39.130 0.00 0.00 0.00 4.20
97 98 5.347342 TCGTAAAGTGGTAGTTTTTCGTCA 58.653 37.500 0.00 0.00 0.00 4.35
98 99 5.231991 TCGTAAAGTGGTAGTTTTTCGTCAC 59.768 40.000 0.00 0.00 0.00 3.67
99 100 4.525411 AAAGTGGTAGTTTTTCGTCACG 57.475 40.909 0.00 0.00 0.00 4.35
100 101 2.476821 AGTGGTAGTTTTTCGTCACGG 58.523 47.619 0.00 0.00 0.00 4.94
101 102 2.159057 AGTGGTAGTTTTTCGTCACGGT 60.159 45.455 0.00 0.00 0.00 4.83
102 103 2.609002 GTGGTAGTTTTTCGTCACGGTT 59.391 45.455 0.00 0.00 0.00 4.44
103 104 2.865551 TGGTAGTTTTTCGTCACGGTTC 59.134 45.455 0.00 0.00 0.00 3.62
104 105 2.221749 GGTAGTTTTTCGTCACGGTTCC 59.778 50.000 0.00 0.00 0.00 3.62
105 106 0.932399 AGTTTTTCGTCACGGTTCCG 59.068 50.000 9.81 9.81 0.00 4.30
106 107 0.652071 GTTTTTCGTCACGGTTCCGT 59.348 50.000 11.27 11.27 43.93 4.69
115 116 2.624169 ACGGTTCCGTGAATTGTGG 58.376 52.632 16.22 0.00 41.38 4.17
116 117 0.179040 ACGGTTCCGTGAATTGTGGT 60.179 50.000 16.22 0.00 41.38 4.16
117 118 1.070445 ACGGTTCCGTGAATTGTGGTA 59.930 47.619 16.22 0.00 41.38 3.25
118 119 1.730064 CGGTTCCGTGAATTGTGGTAG 59.270 52.381 2.82 0.00 0.00 3.18
119 120 2.774687 GGTTCCGTGAATTGTGGTAGT 58.225 47.619 0.00 0.00 0.00 2.73
120 121 3.143728 GGTTCCGTGAATTGTGGTAGTT 58.856 45.455 0.00 0.00 0.00 2.24
121 122 3.566742 GGTTCCGTGAATTGTGGTAGTTT 59.433 43.478 0.00 0.00 0.00 2.66
122 123 4.037089 GGTTCCGTGAATTGTGGTAGTTTT 59.963 41.667 0.00 0.00 0.00 2.43
123 124 5.450826 GGTTCCGTGAATTGTGGTAGTTTTT 60.451 40.000 0.00 0.00 0.00 1.94
124 125 5.176407 TCCGTGAATTGTGGTAGTTTTTG 57.824 39.130 0.00 0.00 0.00 2.44
125 126 4.036971 TCCGTGAATTGTGGTAGTTTTTGG 59.963 41.667 0.00 0.00 0.00 3.28
126 127 4.202070 CCGTGAATTGTGGTAGTTTTTGGT 60.202 41.667 0.00 0.00 0.00 3.67
127 128 5.344884 CGTGAATTGTGGTAGTTTTTGGTT 58.655 37.500 0.00 0.00 0.00 3.67
128 129 6.459848 CCGTGAATTGTGGTAGTTTTTGGTTA 60.460 38.462 0.00 0.00 0.00 2.85
129 130 6.973474 CGTGAATTGTGGTAGTTTTTGGTTAA 59.027 34.615 0.00 0.00 0.00 2.01
130 131 7.488471 CGTGAATTGTGGTAGTTTTTGGTTAAA 59.512 33.333 0.00 0.00 0.00 1.52
131 132 9.320352 GTGAATTGTGGTAGTTTTTGGTTAAAT 57.680 29.630 0.00 0.00 0.00 1.40
136 137 8.168790 TGTGGTAGTTTTTGGTTAAATACTCC 57.831 34.615 0.00 0.00 38.47 3.85
137 138 7.041235 TGTGGTAGTTTTTGGTTAAATACTCCG 60.041 37.037 0.00 0.00 38.47 4.63
138 139 7.173047 GTGGTAGTTTTTGGTTAAATACTCCGA 59.827 37.037 0.00 0.00 38.47 4.55
139 140 7.718753 TGGTAGTTTTTGGTTAAATACTCCGAA 59.281 33.333 0.00 0.00 38.47 4.30
140 141 8.567104 GGTAGTTTTTGGTTAAATACTCCGAAA 58.433 33.333 0.00 0.00 38.47 3.46
141 142 9.603298 GTAGTTTTTGGTTAAATACTCCGAAAG 57.397 33.333 0.00 0.00 38.47 2.62
142 143 8.454570 AGTTTTTGGTTAAATACTCCGAAAGA 57.545 30.769 0.00 0.00 34.37 2.52
143 144 8.905850 AGTTTTTGGTTAAATACTCCGAAAGAA 58.094 29.630 0.00 0.00 34.37 2.52
144 145 9.518906 GTTTTTGGTTAAATACTCCGAAAGAAA 57.481 29.630 0.00 0.00 36.41 2.52
146 147 9.738832 TTTTGGTTAAATACTCCGAAAGAAAAG 57.261 29.630 0.00 0.00 32.74 2.27
147 148 8.680039 TTGGTTAAATACTCCGAAAGAAAAGA 57.320 30.769 0.00 0.00 0.00 2.52
148 149 8.091385 TGGTTAAATACTCCGAAAGAAAAGAC 57.909 34.615 0.00 0.00 0.00 3.01
149 150 7.716123 TGGTTAAATACTCCGAAAGAAAAGACA 59.284 33.333 0.00 0.00 0.00 3.41
150 151 8.013947 GGTTAAATACTCCGAAAGAAAAGACAC 58.986 37.037 0.00 0.00 0.00 3.67
151 152 8.553696 GTTAAATACTCCGAAAGAAAAGACACA 58.446 33.333 0.00 0.00 0.00 3.72
152 153 7.745620 AAATACTCCGAAAGAAAAGACACAT 57.254 32.000 0.00 0.00 0.00 3.21
153 154 6.969828 ATACTCCGAAAGAAAAGACACATC 57.030 37.500 0.00 0.00 0.00 3.06
154 155 4.962155 ACTCCGAAAGAAAAGACACATCT 58.038 39.130 0.00 0.00 36.42 2.90
169 170 7.602517 AGACACATCTTTTGCAGATAACTAC 57.397 36.000 0.00 0.00 40.67 2.73
170 171 7.390027 AGACACATCTTTTGCAGATAACTACT 58.610 34.615 0.00 0.00 40.67 2.57
171 172 7.880195 AGACACATCTTTTGCAGATAACTACTT 59.120 33.333 0.00 0.00 40.67 2.24
172 173 8.034058 ACACATCTTTTGCAGATAACTACTTC 57.966 34.615 0.00 0.00 40.67 3.01
173 174 7.148573 ACACATCTTTTGCAGATAACTACTTCG 60.149 37.037 0.00 0.00 40.67 3.79
174 175 5.779806 TCTTTTGCAGATAACTACTTCGC 57.220 39.130 0.00 0.00 0.00 4.70
175 176 4.630069 TCTTTTGCAGATAACTACTTCGCC 59.370 41.667 0.00 0.00 0.00 5.54
176 177 3.887621 TTGCAGATAACTACTTCGCCT 57.112 42.857 0.00 0.00 0.00 5.52
177 178 4.994907 TTGCAGATAACTACTTCGCCTA 57.005 40.909 0.00 0.00 0.00 3.93
178 179 4.994907 TGCAGATAACTACTTCGCCTAA 57.005 40.909 0.00 0.00 0.00 2.69
179 180 4.679662 TGCAGATAACTACTTCGCCTAAC 58.320 43.478 0.00 0.00 0.00 2.34
180 181 4.049869 GCAGATAACTACTTCGCCTAACC 58.950 47.826 0.00 0.00 0.00 2.85
181 182 4.441079 GCAGATAACTACTTCGCCTAACCA 60.441 45.833 0.00 0.00 0.00 3.67
182 183 5.657474 CAGATAACTACTTCGCCTAACCAA 58.343 41.667 0.00 0.00 0.00 3.67
183 184 6.103997 CAGATAACTACTTCGCCTAACCAAA 58.896 40.000 0.00 0.00 0.00 3.28
184 185 6.592607 CAGATAACTACTTCGCCTAACCAAAA 59.407 38.462 0.00 0.00 0.00 2.44
185 186 7.118680 CAGATAACTACTTCGCCTAACCAAAAA 59.881 37.037 0.00 0.00 0.00 1.94
186 187 7.827729 AGATAACTACTTCGCCTAACCAAAAAT 59.172 33.333 0.00 0.00 0.00 1.82
187 188 6.644248 AACTACTTCGCCTAACCAAAAATT 57.356 33.333 0.00 0.00 0.00 1.82
188 189 6.009115 ACTACTTCGCCTAACCAAAAATTG 57.991 37.500 0.00 0.00 0.00 2.32
189 190 4.929819 ACTTCGCCTAACCAAAAATTGT 57.070 36.364 0.00 0.00 0.00 2.71
190 191 5.270893 ACTTCGCCTAACCAAAAATTGTT 57.729 34.783 0.00 0.00 0.00 2.83
191 192 5.286438 ACTTCGCCTAACCAAAAATTGTTC 58.714 37.500 0.00 0.00 0.00 3.18
192 193 4.245845 TCGCCTAACCAAAAATTGTTCC 57.754 40.909 0.00 0.00 0.00 3.62
193 194 3.892588 TCGCCTAACCAAAAATTGTTCCT 59.107 39.130 0.00 0.00 0.00 3.36
194 195 4.342665 TCGCCTAACCAAAAATTGTTCCTT 59.657 37.500 0.00 0.00 0.00 3.36
195 196 5.053811 CGCCTAACCAAAAATTGTTCCTTT 58.946 37.500 0.00 0.00 0.00 3.11
196 197 5.176774 CGCCTAACCAAAAATTGTTCCTTTC 59.823 40.000 0.00 0.00 0.00 2.62
197 198 6.052360 GCCTAACCAAAAATTGTTCCTTTCA 58.948 36.000 0.00 0.00 0.00 2.69
198 199 6.202762 GCCTAACCAAAAATTGTTCCTTTCAG 59.797 38.462 0.00 0.00 0.00 3.02
199 200 7.272244 CCTAACCAAAAATTGTTCCTTTCAGT 58.728 34.615 0.00 0.00 0.00 3.41
200 201 8.417884 CCTAACCAAAAATTGTTCCTTTCAGTA 58.582 33.333 0.00 0.00 0.00 2.74
201 202 9.463443 CTAACCAAAAATTGTTCCTTTCAGTAG 57.537 33.333 0.00 0.00 0.00 2.57
202 203 7.654022 ACCAAAAATTGTTCCTTTCAGTAGA 57.346 32.000 0.00 0.00 0.00 2.59
203 204 8.250143 ACCAAAAATTGTTCCTTTCAGTAGAT 57.750 30.769 0.00 0.00 0.00 1.98
204 205 8.143835 ACCAAAAATTGTTCCTTTCAGTAGATG 58.856 33.333 0.00 0.00 0.00 2.90
205 206 8.143835 CCAAAAATTGTTCCTTTCAGTAGATGT 58.856 33.333 0.00 0.00 0.00 3.06
208 209 9.574516 AAAATTGTTCCTTTCAGTAGATGTACT 57.425 29.630 0.00 0.00 40.38 2.73
216 217 0.747255 AGTAGATGTACTGCGCCTGG 59.253 55.000 4.18 0.00 38.14 4.45
217 218 0.460311 GTAGATGTACTGCGCCTGGT 59.540 55.000 4.18 3.76 0.00 4.00
218 219 1.679680 GTAGATGTACTGCGCCTGGTA 59.320 52.381 4.18 2.65 0.00 3.25
219 220 0.460311 AGATGTACTGCGCCTGGTAC 59.540 55.000 20.73 20.73 38.82 3.34
220 221 3.780357 TGTACTGCGCCTGGTACA 58.220 55.556 24.06 24.06 43.71 2.90
221 222 2.051105 TGTACTGCGCCTGGTACAA 58.949 52.632 24.99 14.55 43.20 2.41
222 223 0.393448 TGTACTGCGCCTGGTACAAA 59.607 50.000 24.99 11.24 43.20 2.83
223 224 1.002659 TGTACTGCGCCTGGTACAAAT 59.997 47.619 24.99 0.00 43.20 2.32
224 225 1.396996 GTACTGCGCCTGGTACAAATG 59.603 52.381 21.85 0.00 38.70 2.32
225 226 0.960364 ACTGCGCCTGGTACAAATGG 60.960 55.000 4.18 0.00 38.70 3.16
226 227 0.960364 CTGCGCCTGGTACAAATGGT 60.960 55.000 4.18 0.00 38.70 3.55
227 228 0.538516 TGCGCCTGGTACAAATGGTT 60.539 50.000 4.18 0.00 38.70 3.67
228 229 1.271434 TGCGCCTGGTACAAATGGTTA 60.271 47.619 4.18 0.00 38.70 2.85
229 230 1.400494 GCGCCTGGTACAAATGGTTAG 59.600 52.381 0.00 0.00 38.70 2.34
230 231 2.937873 GCGCCTGGTACAAATGGTTAGA 60.938 50.000 0.00 0.00 38.70 2.10
231 232 3.340034 CGCCTGGTACAAATGGTTAGAA 58.660 45.455 0.00 0.00 38.70 2.10
232 233 3.945285 CGCCTGGTACAAATGGTTAGAAT 59.055 43.478 0.00 0.00 38.70 2.40
233 234 4.398044 CGCCTGGTACAAATGGTTAGAATT 59.602 41.667 0.00 0.00 38.70 2.17
234 235 5.105917 CGCCTGGTACAAATGGTTAGAATTT 60.106 40.000 0.00 0.00 38.70 1.82
235 236 6.094325 CGCCTGGTACAAATGGTTAGAATTTA 59.906 38.462 0.00 0.00 38.70 1.40
236 237 7.480810 GCCTGGTACAAATGGTTAGAATTTAG 58.519 38.462 0.00 0.00 38.70 1.85
237 238 7.416326 GCCTGGTACAAATGGTTAGAATTTAGG 60.416 40.741 0.00 0.00 38.70 2.69
238 239 7.832187 CCTGGTACAAATGGTTAGAATTTAGGA 59.168 37.037 0.00 0.00 38.70 2.94
239 240 8.570068 TGGTACAAATGGTTAGAATTTAGGAC 57.430 34.615 0.00 0.00 31.92 3.85
240 241 8.387813 TGGTACAAATGGTTAGAATTTAGGACT 58.612 33.333 0.00 0.00 31.92 3.85
241 242 8.674607 GGTACAAATGGTTAGAATTTAGGACTG 58.325 37.037 0.00 0.00 0.00 3.51
242 243 7.158099 ACAAATGGTTAGAATTTAGGACTGC 57.842 36.000 0.00 0.00 0.00 4.40
243 244 6.719370 ACAAATGGTTAGAATTTAGGACTGCA 59.281 34.615 0.00 0.00 0.00 4.41
244 245 7.397192 ACAAATGGTTAGAATTTAGGACTGCAT 59.603 33.333 0.00 0.00 0.00 3.96
245 246 8.902806 CAAATGGTTAGAATTTAGGACTGCATA 58.097 33.333 0.00 0.00 0.00 3.14
246 247 8.682936 AATGGTTAGAATTTAGGACTGCATAG 57.317 34.615 0.00 0.00 0.00 2.23
247 248 6.055588 TGGTTAGAATTTAGGACTGCATAGC 58.944 40.000 0.00 0.00 0.00 2.97
248 249 5.470437 GGTTAGAATTTAGGACTGCATAGCC 59.530 44.000 0.00 0.00 0.00 3.93
249 250 6.292150 GTTAGAATTTAGGACTGCATAGCCT 58.708 40.000 7.24 7.24 35.52 4.58
250 251 7.442656 GTTAGAATTTAGGACTGCATAGCCTA 58.557 38.462 5.52 5.52 34.02 3.93
251 252 6.694445 AGAATTTAGGACTGCATAGCCTAT 57.306 37.500 9.38 0.00 34.70 2.57
252 253 6.706295 AGAATTTAGGACTGCATAGCCTATC 58.294 40.000 9.38 5.77 34.70 2.08
253 254 6.270927 AGAATTTAGGACTGCATAGCCTATCA 59.729 38.462 9.38 2.44 34.70 2.15
254 255 4.873746 TTAGGACTGCATAGCCTATCAC 57.126 45.455 9.38 0.00 34.70 3.06
255 256 1.974236 AGGACTGCATAGCCTATCACC 59.026 52.381 0.70 0.00 31.45 4.02
256 257 1.337260 GGACTGCATAGCCTATCACCG 60.337 57.143 0.00 0.00 0.00 4.94
257 258 1.341531 GACTGCATAGCCTATCACCGT 59.658 52.381 0.00 0.00 0.00 4.83
258 259 1.762957 ACTGCATAGCCTATCACCGTT 59.237 47.619 0.00 0.00 0.00 4.44
259 260 2.170607 ACTGCATAGCCTATCACCGTTT 59.829 45.455 0.00 0.00 0.00 3.60
260 261 2.802816 CTGCATAGCCTATCACCGTTTC 59.197 50.000 0.00 0.00 0.00 2.78
261 262 2.169561 TGCATAGCCTATCACCGTTTCA 59.830 45.455 0.00 0.00 0.00 2.69
262 263 2.802816 GCATAGCCTATCACCGTTTCAG 59.197 50.000 0.00 0.00 0.00 3.02
286 287 2.297033 TGTTTTTCAGGAAGCAGATGGC 59.703 45.455 0.00 0.00 45.30 4.40
312 313 7.176515 CACAGATTGCTACTCTATCTACCTCAT 59.823 40.741 0.00 0.00 35.56 2.90
313 314 7.393234 ACAGATTGCTACTCTATCTACCTCATC 59.607 40.741 0.00 0.00 35.56 2.92
325 326 5.263968 TCTACCTCATCGAATTGTTCTCC 57.736 43.478 0.00 0.00 0.00 3.71
337 338 8.391075 TCGAATTGTTCTCCTTTTAGTTCATT 57.609 30.769 0.00 0.00 0.00 2.57
338 339 9.496873 TCGAATTGTTCTCCTTTTAGTTCATTA 57.503 29.630 0.00 0.00 0.00 1.90
343 344 8.792830 TGTTCTCCTTTTAGTTCATTATCTGG 57.207 34.615 0.00 0.00 0.00 3.86
354 355 4.659111 TCATTATCTGGGCTTTGCAATG 57.341 40.909 0.00 3.50 0.00 2.82
358 359 0.612732 TCTGGGCTTTGCAATGGAGG 60.613 55.000 13.62 0.00 0.00 4.30
386 387 5.276461 TCGATCTGGTATACAAACAGCAT 57.724 39.130 5.01 0.15 32.42 3.79
417 418 1.497991 TATACTTTGCTCGGATGCGC 58.502 50.000 0.00 0.00 35.36 6.09
464 465 3.056328 GGCGGCGCTTCCTTTTCT 61.056 61.111 32.30 0.00 0.00 2.52
466 467 1.303091 GGCGGCGCTTCCTTTTCTAA 61.303 55.000 32.30 0.00 0.00 2.10
502 505 2.555199 CCGTCAGCCCTTTTCATCTAG 58.445 52.381 0.00 0.00 0.00 2.43
503 507 2.168521 CCGTCAGCCCTTTTCATCTAGA 59.831 50.000 0.00 0.00 0.00 2.43
505 509 4.446371 CGTCAGCCCTTTTCATCTAGATT 58.554 43.478 1.33 0.00 0.00 2.40
507 511 5.463724 CGTCAGCCCTTTTCATCTAGATTAC 59.536 44.000 1.33 0.00 0.00 1.89
508 512 5.760743 GTCAGCCCTTTTCATCTAGATTACC 59.239 44.000 1.33 0.00 0.00 2.85
511 515 5.430089 AGCCCTTTTCATCTAGATTACCTGT 59.570 40.000 1.33 0.00 0.00 4.00
549 553 0.174845 CTGATGTTGGGCCATTGCAG 59.825 55.000 7.26 9.38 40.13 4.41
557 561 1.290009 GGCCATTGCAGGAACACAC 59.710 57.895 0.00 0.00 40.13 3.82
560 564 1.069049 GCCATTGCAGGAACACACTTT 59.931 47.619 0.00 0.00 37.47 2.66
601 605 2.808543 CTGCTCCTGTTGGTGTTTCTAC 59.191 50.000 0.00 0.00 34.23 2.59
602 606 2.438021 TGCTCCTGTTGGTGTTTCTACT 59.562 45.455 0.00 0.00 34.23 2.57
603 607 3.118038 TGCTCCTGTTGGTGTTTCTACTT 60.118 43.478 0.00 0.00 34.23 2.24
604 608 3.883489 GCTCCTGTTGGTGTTTCTACTTT 59.117 43.478 0.00 0.00 34.23 2.66
605 609 4.023963 GCTCCTGTTGGTGTTTCTACTTTC 60.024 45.833 0.00 0.00 34.23 2.62
606 610 5.367945 TCCTGTTGGTGTTTCTACTTTCT 57.632 39.130 0.00 0.00 34.23 2.52
607 611 6.488769 TCCTGTTGGTGTTTCTACTTTCTA 57.511 37.500 0.00 0.00 34.23 2.10
640 644 3.382865 GGCAATCAAAGGATCCTTCTTCC 59.617 47.826 27.20 17.12 34.84 3.46
702 729 7.223971 TGCTGAGTGTACTGTTTAAGTTTAGTG 59.776 37.037 0.00 0.00 40.56 2.74
710 737 4.387598 TGTTTAAGTTTAGTGGCGGCTAA 58.612 39.130 11.43 0.00 0.00 3.09
757 784 8.623903 ACCAAGTGCAAGAAACATATATATGTG 58.376 33.333 25.42 15.12 45.55 3.21
758 785 8.623903 CCAAGTGCAAGAAACATATATATGTGT 58.376 33.333 25.42 21.32 45.55 3.72
774 808 1.621814 TGTGTAGTGCCAGGTTAGGTC 59.378 52.381 0.00 0.00 0.00 3.85
783 817 1.675641 AGGTTAGGTCGTACGGCGT 60.676 57.895 19.65 19.65 42.13 5.68
814 851 7.927092 AGTTTTACTACCTTCTTTCTGTCTGAC 59.073 37.037 0.00 0.00 0.00 3.51
911 959 5.290643 GCTGATCGCCTTTGCTCTTATATAG 59.709 44.000 0.00 0.00 34.43 1.31
913 961 6.993079 TGATCGCCTTTGCTCTTATATAGAA 58.007 36.000 0.00 0.00 34.43 2.10
916 966 9.243637 GATCGCCTTTGCTCTTATATAGAATAG 57.756 37.037 0.00 0.00 34.43 1.73
918 968 9.239551 TCGCCTTTGCTCTTATATAGAATAGTA 57.760 33.333 0.00 0.00 34.43 1.82
919 969 9.509855 CGCCTTTGCTCTTATATAGAATAGTAG 57.490 37.037 0.00 0.00 34.43 2.57
1035 1360 3.004944 GGTATCGACCTTGGTCAGATCTC 59.995 52.174 21.14 16.93 43.16 2.75
1037 1362 1.006043 TCGACCTTGGTCAGATCTCCT 59.994 52.381 18.51 0.00 0.00 3.69
1047 1372 0.539051 CAGATCTCCTGCCCGAACTT 59.461 55.000 0.00 0.00 35.89 2.66
1050 1375 2.032620 GATCTCCTGCCCGAACTTCTA 58.967 52.381 0.00 0.00 0.00 2.10
1051 1376 1.933021 TCTCCTGCCCGAACTTCTAA 58.067 50.000 0.00 0.00 0.00 2.10
1068 1393 0.685097 TAAGCCTTGTCCTCAAGCGT 59.315 50.000 2.85 1.12 46.74 5.07
1129 1454 1.221840 CACCCATGGCGCTCTAACT 59.778 57.895 6.09 0.00 0.00 2.24
1179 1504 1.997874 ATGGCTCACCCTCCCTGAC 60.998 63.158 0.00 0.00 33.59 3.51
1192 1517 0.905357 CCCTGACGGAACATTCCTCT 59.095 55.000 8.97 0.00 45.33 3.69
1194 1519 1.276421 CCTGACGGAACATTCCTCTGT 59.724 52.381 8.97 0.00 45.33 3.41
1224 1549 2.359850 GAGGTTCACCGCATGCCA 60.360 61.111 13.15 0.00 42.08 4.92
1225 1550 2.360350 AGGTTCACCGCATGCCAG 60.360 61.111 13.15 6.46 42.08 4.85
1226 1551 4.120331 GGTTCACCGCATGCCAGC 62.120 66.667 13.15 0.00 0.00 4.85
1284 1609 6.040955 TCGATAACTGGCTATTTCTCATGAGT 59.959 38.462 21.92 6.09 0.00 3.41
1323 1648 5.010922 CACATTGATGAACCCTTTCTCCAAA 59.989 40.000 0.00 0.00 31.94 3.28
1329 1654 3.296854 GAACCCTTTCTCCAAAACCACT 58.703 45.455 0.00 0.00 0.00 4.00
1391 1717 4.458642 GGTACCCTACGAATCTGATCCTAC 59.541 50.000 0.00 0.00 0.00 3.18
1454 1782 4.103785 CCTATCACCTGATTCCCTCATTGT 59.896 45.833 0.00 0.00 36.05 2.71
1464 1792 2.380941 TCCCTCATTGTGGCATTGATG 58.619 47.619 0.00 0.00 0.00 3.07
1473 1803 2.016318 GTGGCATTGATGATGGACGAA 58.984 47.619 0.00 0.00 36.21 3.85
1475 1805 2.292267 GGCATTGATGATGGACGAAGT 58.708 47.619 0.00 0.00 39.13 3.01
1512 1851 1.789078 GCATTAGCCAGCCACCGATG 61.789 60.000 0.00 0.00 33.58 3.84
1557 1899 0.889186 GGCAGCCATTATACCACCCG 60.889 60.000 6.55 0.00 0.00 5.28
1600 1942 2.812011 GGAAAGTTGTATGCGGTGACTT 59.188 45.455 0.00 0.00 32.33 3.01
1656 1998 6.350110 GCAGCAATCTTGGTAGTAATCCAAAA 60.350 38.462 0.00 0.00 43.16 2.44
1685 2027 2.812011 GCGTAATTGAGTCTTTGGGTGT 59.188 45.455 0.00 0.00 0.00 4.16
1689 2031 3.733443 ATTGAGTCTTTGGGTGTTTGC 57.267 42.857 0.00 0.00 0.00 3.68
1714 2056 1.659098 GAGTACCAGAATGCGTTTCCG 59.341 52.381 0.00 0.00 34.67 4.30
1720 2064 0.895530 AGAATGCGTTTCCGGAGAGA 59.104 50.000 3.34 0.00 38.01 3.10
1755 2099 6.985188 TTCAGGTTGTATCTAGTTGAATGC 57.015 37.500 0.00 0.00 0.00 3.56
1808 2158 2.284921 TCACCTGGGCCCTCTCTG 60.285 66.667 25.70 12.89 0.00 3.35
1855 2211 3.364964 GCAGACTATTGGGTTTGTTGTCG 60.365 47.826 0.00 0.00 0.00 4.35
1895 2251 0.179034 GAGCCTTGCCGATGGAGAAT 60.179 55.000 0.00 0.00 0.00 2.40
1933 2289 1.250328 CCATGCTCTCTTTGTTGGCA 58.750 50.000 0.00 0.00 37.32 4.92
2013 3067 6.037500 GCATCTACTTCATTTGTGACTATGCA 59.962 38.462 0.00 0.00 0.00 3.96
2025 3079 5.953183 TGTGACTATGCACATCCAAAATTC 58.047 37.500 0.00 0.00 43.35 2.17
2029 3083 7.280876 GTGACTATGCACATCCAAAATTCTCTA 59.719 37.037 0.00 0.00 38.63 2.43
2065 3120 3.067106 GACTCTGGTGTGTACAACATGG 58.933 50.000 2.84 2.58 43.46 3.66
2165 3224 3.254629 TCCATGCTGGAGCTGTTTC 57.745 52.632 0.00 0.00 42.67 2.78
2173 3283 2.095364 GCTGGAGCTGTTTCACAGATTG 60.095 50.000 8.11 0.00 45.93 2.67
2178 3288 4.379186 GGAGCTGTTTCACAGATTGTCATG 60.379 45.833 8.11 0.00 45.93 3.07
2190 3300 6.261603 CACAGATTGTCATGTGTATGCCTAAT 59.738 38.462 0.00 0.00 41.49 1.73
2226 3343 0.895100 TTGTGATCAACCCAGCCTGC 60.895 55.000 0.00 0.00 0.00 4.85
2250 3368 4.737946 GCGCTGTCATCTTTATCCTAGTGT 60.738 45.833 0.00 0.00 0.00 3.55
2254 3372 7.653713 CGCTGTCATCTTTATCCTAGTGTTATT 59.346 37.037 0.00 0.00 0.00 1.40
2287 3406 8.746922 TCGACTTACGTTCTTAATTTGTATGT 57.253 30.769 0.00 0.00 43.13 2.29
2319 3438 4.039124 CCAGCCTTGTTCTGGTTATGTTTT 59.961 41.667 1.07 0.00 44.62 2.43
2321 3440 5.463061 CAGCCTTGTTCTGGTTATGTTTTTG 59.537 40.000 0.00 0.00 0.00 2.44
2324 3443 5.463061 CCTTGTTCTGGTTATGTTTTTGCTG 59.537 40.000 0.00 0.00 0.00 4.41
2326 3445 4.202202 TGTTCTGGTTATGTTTTTGCTGGG 60.202 41.667 0.00 0.00 0.00 4.45
2332 3451 4.441495 GGTTATGTTTTTGCTGGGGCTATC 60.441 45.833 0.00 0.00 39.59 2.08
2334 3453 2.446435 TGTTTTTGCTGGGGCTATCTC 58.554 47.619 0.00 0.00 39.59 2.75
2338 3457 1.216064 TTGCTGGGGCTATCTCATGT 58.784 50.000 0.00 0.00 39.59 3.21
2340 3459 1.694150 TGCTGGGGCTATCTCATGTAC 59.306 52.381 0.00 0.00 39.59 2.90
2341 3460 1.002544 GCTGGGGCTATCTCATGTACC 59.997 57.143 0.00 0.00 35.22 3.34
2342 3461 2.329267 CTGGGGCTATCTCATGTACCA 58.671 52.381 0.00 0.00 0.00 3.25
2343 3462 2.037772 CTGGGGCTATCTCATGTACCAC 59.962 54.545 0.00 0.00 0.00 4.16
2344 3463 2.047061 GGGGCTATCTCATGTACCACA 58.953 52.381 0.00 0.00 0.00 4.17
2345 3464 2.037772 GGGGCTATCTCATGTACCACAG 59.962 54.545 0.00 0.00 0.00 3.66
2347 3466 3.388024 GGGCTATCTCATGTACCACAGAA 59.612 47.826 0.00 0.00 0.00 3.02
2350 3469 6.058183 GGCTATCTCATGTACCACAGAATTT 58.942 40.000 0.00 0.00 0.00 1.82
2351 3470 6.203723 GGCTATCTCATGTACCACAGAATTTC 59.796 42.308 0.00 0.00 0.00 2.17
2364 3483 8.574196 ACCACAGAATTTCGAACTTTTAATTG 57.426 30.769 0.00 0.00 0.00 2.32
2377 3496 7.484641 CGAACTTTTAATTGGTATGATGGTGTG 59.515 37.037 0.00 0.00 0.00 3.82
2393 3512 5.627499 TGGTGTGCACTTCAAATCTTATC 57.373 39.130 19.41 0.00 0.00 1.75
2397 3516 6.529125 GGTGTGCACTTCAAATCTTATCAATG 59.471 38.462 19.41 0.00 0.00 2.82
2398 3517 6.529125 GTGTGCACTTCAAATCTTATCAATGG 59.471 38.462 19.41 0.00 0.00 3.16
2399 3518 6.209192 TGTGCACTTCAAATCTTATCAATGGT 59.791 34.615 19.41 0.00 0.00 3.55
2400 3519 6.749118 GTGCACTTCAAATCTTATCAATGGTC 59.251 38.462 10.32 0.00 0.00 4.02
2402 3521 6.681368 GCACTTCAAATCTTATCAATGGTCCC 60.681 42.308 0.00 0.00 0.00 4.46
2403 3522 6.377996 CACTTCAAATCTTATCAATGGTCCCA 59.622 38.462 0.00 0.00 0.00 4.37
2405 3524 7.620888 ACTTCAAATCTTATCAATGGTCCCAAT 59.379 33.333 0.00 0.00 0.00 3.16
2430 3550 5.124297 TGGATGTATTCAGATGTGCAACTTG 59.876 40.000 0.00 0.00 38.04 3.16
2434 3554 6.175471 TGTATTCAGATGTGCAACTTGATCT 58.825 36.000 0.00 0.00 38.04 2.75
2439 3559 5.300034 TCAGATGTGCAACTTGATCTTTGTT 59.700 36.000 0.00 0.00 38.04 2.83
2449 3569 7.420002 CAACTTGATCTTTGTTTGAGTGATGA 58.580 34.615 0.00 0.00 0.00 2.92
2451 3571 6.994496 ACTTGATCTTTGTTTGAGTGATGAGA 59.006 34.615 0.00 0.00 0.00 3.27
2452 3572 6.791887 TGATCTTTGTTTGAGTGATGAGAC 57.208 37.500 0.00 0.00 0.00 3.36
2453 3573 6.528321 TGATCTTTGTTTGAGTGATGAGACT 58.472 36.000 0.00 0.00 0.00 3.24
2454 3574 7.670364 TGATCTTTGTTTGAGTGATGAGACTA 58.330 34.615 0.00 0.00 0.00 2.59
2463 3583 9.243637 GTTTGAGTGATGAGACTATTAAGCTAG 57.756 37.037 0.00 0.00 0.00 3.42
2464 3584 7.517614 TGAGTGATGAGACTATTAAGCTAGG 57.482 40.000 0.00 0.00 0.00 3.02
2469 3589 5.474578 TGAGACTATTAAGCTAGGGCATG 57.525 43.478 0.00 0.00 41.70 4.06
2471 3591 6.075315 TGAGACTATTAAGCTAGGGCATGTA 58.925 40.000 0.00 0.00 41.70 2.29
2472 3592 6.015350 TGAGACTATTAAGCTAGGGCATGTAC 60.015 42.308 0.00 0.00 41.70 2.90
2473 3593 5.047943 AGACTATTAAGCTAGGGCATGTACG 60.048 44.000 0.00 0.00 41.70 3.67
2474 3594 4.587684 ACTATTAAGCTAGGGCATGTACGT 59.412 41.667 0.00 0.00 41.70 3.57
2475 3595 2.882927 TAAGCTAGGGCATGTACGTG 57.117 50.000 10.89 10.89 41.70 4.49
2476 3596 1.191535 AAGCTAGGGCATGTACGTGA 58.808 50.000 19.38 0.00 41.70 4.35
2477 3597 1.191535 AGCTAGGGCATGTACGTGAA 58.808 50.000 19.38 0.03 41.70 3.18
2480 3600 2.933492 GCTAGGGCATGTACGTGAACAA 60.933 50.000 19.38 0.37 38.54 2.83
2481 3601 1.519408 AGGGCATGTACGTGAACAAC 58.481 50.000 19.38 0.23 32.02 3.32
2482 3602 0.519961 GGGCATGTACGTGAACAACC 59.480 55.000 19.38 9.42 32.02 3.77
2483 3603 1.519408 GGCATGTACGTGAACAACCT 58.481 50.000 19.38 0.00 32.02 3.50
2484 3604 1.877443 GGCATGTACGTGAACAACCTT 59.123 47.619 19.38 0.00 32.02 3.50
2486 3606 3.243267 GGCATGTACGTGAACAACCTTTT 60.243 43.478 19.38 0.00 32.02 2.27
2487 3607 3.972502 GCATGTACGTGAACAACCTTTTC 59.027 43.478 19.38 0.00 32.02 2.29
2488 3608 4.261031 GCATGTACGTGAACAACCTTTTCT 60.261 41.667 19.38 0.00 32.02 2.52
2489 3609 4.868450 TGTACGTGAACAACCTTTTCTG 57.132 40.909 0.00 0.00 0.00 3.02
2490 3610 3.623960 TGTACGTGAACAACCTTTTCTGG 59.376 43.478 0.00 0.00 0.00 3.86
2491 3611 2.993937 ACGTGAACAACCTTTTCTGGA 58.006 42.857 0.00 0.00 0.00 3.86
2493 3613 2.290641 CGTGAACAACCTTTTCTGGAGG 59.709 50.000 0.00 0.00 40.24 4.30
2498 3621 4.184649 ACAACCTTTTCTGGAGGTGAAT 57.815 40.909 0.00 0.00 46.60 2.57
2511 3634 4.149598 GGAGGTGAATAAACTTGGGTGTT 58.850 43.478 0.00 0.00 0.00 3.32
2512 3635 4.587262 GGAGGTGAATAAACTTGGGTGTTT 59.413 41.667 0.00 0.00 42.10 2.83
2515 3638 5.838521 AGGTGAATAAACTTGGGTGTTTCAT 59.161 36.000 0.00 0.00 40.23 2.57
2518 3641 7.812669 GGTGAATAAACTTGGGTGTTTCATTAG 59.187 37.037 0.00 0.00 40.23 1.73
2522 3645 3.778265 ACTTGGGTGTTTCATTAGCCAT 58.222 40.909 0.00 0.00 43.29 4.40
2534 3657 7.124599 TGTTTCATTAGCCATTGAATCCTGATT 59.875 33.333 0.00 0.00 32.27 2.57
2536 3659 4.924305 TTAGCCATTGAATCCTGATTGC 57.076 40.909 0.00 0.00 0.00 3.56
2541 3664 2.519771 TTGAATCCTGATTGCTGCCT 57.480 45.000 0.00 0.00 0.00 4.75
2542 3665 1.758936 TGAATCCTGATTGCTGCCTG 58.241 50.000 0.00 0.00 0.00 4.85
2543 3666 0.384669 GAATCCTGATTGCTGCCTGC 59.615 55.000 0.00 0.00 43.25 4.85
2579 3702 8.201554 GAGTTTTGCTCACAACTATGATCATA 57.798 34.615 14.64 14.64 43.58 2.15
2593 3716 8.037382 ACTATGATCATATTTCGGATTGCTTG 57.963 34.615 15.71 2.16 0.00 4.01
2595 3718 3.988379 TCATATTTCGGATTGCTTGGC 57.012 42.857 0.00 0.00 0.00 4.52
2605 3728 0.251922 ATTGCTTGGCACTCCCATGT 60.252 50.000 0.00 0.00 44.89 3.21
2606 3729 1.180456 TTGCTTGGCACTCCCATGTG 61.180 55.000 0.00 0.00 44.89 3.21
2614 3737 1.171308 CACTCCCATGTGAAGGCAAG 58.829 55.000 0.00 0.00 40.12 4.01
2619 3742 2.158475 TCCCATGTGAAGGCAAGTTTCT 60.158 45.455 0.00 0.00 0.00 2.52
2620 3743 2.629617 CCCATGTGAAGGCAAGTTTCTT 59.370 45.455 0.00 0.00 0.00 2.52
2621 3744 3.070015 CCCATGTGAAGGCAAGTTTCTTT 59.930 43.478 0.00 0.00 0.00 2.52
2622 3745 4.053295 CCATGTGAAGGCAAGTTTCTTTG 58.947 43.478 0.00 0.00 0.00 2.77
2635 3758 7.998753 CAAGTTTCTTTGCTTCTTTTGAGAT 57.001 32.000 0.00 0.00 0.00 2.75
2636 3759 7.838498 CAAGTTTCTTTGCTTCTTTTGAGATG 58.162 34.615 0.00 0.00 0.00 2.90
2637 3760 7.338800 AGTTTCTTTGCTTCTTTTGAGATGA 57.661 32.000 0.00 0.00 0.00 2.92
2638 3761 7.424001 AGTTTCTTTGCTTCTTTTGAGATGAG 58.576 34.615 0.00 0.00 0.00 2.90
2639 3762 7.284034 AGTTTCTTTGCTTCTTTTGAGATGAGA 59.716 33.333 0.00 0.00 0.00 3.27
2640 3763 7.572523 TTCTTTGCTTCTTTTGAGATGAGAA 57.427 32.000 0.00 0.00 0.00 2.87
2641 3764 7.572523 TCTTTGCTTCTTTTGAGATGAGAAA 57.427 32.000 0.00 0.00 0.00 2.52
2642 3765 7.999679 TCTTTGCTTCTTTTGAGATGAGAAAA 58.000 30.769 0.00 0.00 0.00 2.29
2643 3766 8.636213 TCTTTGCTTCTTTTGAGATGAGAAAAT 58.364 29.630 0.00 0.00 0.00 1.82
2644 3767 8.807667 TTTGCTTCTTTTGAGATGAGAAAATC 57.192 30.769 0.00 0.00 0.00 2.17
2645 3768 7.514784 TGCTTCTTTTGAGATGAGAAAATCA 57.485 32.000 0.00 0.00 43.70 2.57
2843 3974 6.576551 TTTGTCTAAAATTCGGCAAAACAC 57.423 33.333 0.00 0.00 0.00 3.32
2880 4030 5.864986 TCTCGGCGAATTGAAATAGTTTTC 58.135 37.500 12.13 0.00 41.39 2.29
2996 4192 0.970937 TTCTCCTCCTTCACGCGGAT 60.971 55.000 12.47 0.00 0.00 4.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 3.077359 CAAGTCTGAAAAGAGCCCGATT 58.923 45.455 0.00 0.00 0.00 3.34
3 4 2.616510 CCAAGTCTGAAAAGAGCCCGAT 60.617 50.000 0.00 0.00 0.00 4.18
6 7 2.278332 ACCAAGTCTGAAAAGAGCCC 57.722 50.000 0.00 0.00 0.00 5.19
7 8 4.009370 ACTACCAAGTCTGAAAAGAGCC 57.991 45.455 0.00 0.00 0.00 4.70
8 9 6.378710 AAAACTACCAAGTCTGAAAAGAGC 57.621 37.500 0.00 0.00 33.75 4.09
29 30 4.467198 TTTTCCTAAACCGTGGCAAAAA 57.533 36.364 0.00 0.00 0.00 1.94
30 31 4.467198 TTTTTCCTAAACCGTGGCAAAA 57.533 36.364 0.00 0.00 0.00 2.44
54 55 3.356658 CGATTTTGTGCGAAAAACTACCG 59.643 43.478 0.00 0.00 32.12 4.02
55 56 4.284485 ACGATTTTGTGCGAAAAACTACC 58.716 39.130 0.00 0.00 32.12 3.18
56 57 6.956393 TTACGATTTTGTGCGAAAAACTAC 57.044 33.333 0.00 0.00 32.12 2.73
57 58 7.164498 CACTTTACGATTTTGTGCGAAAAACTA 59.836 33.333 0.00 0.00 32.12 2.24
58 59 6.020995 CACTTTACGATTTTGTGCGAAAAACT 60.021 34.615 0.00 0.00 32.12 2.66
59 60 6.111050 CACTTTACGATTTTGTGCGAAAAAC 58.889 36.000 0.00 0.00 32.12 2.43
60 61 5.230306 CCACTTTACGATTTTGTGCGAAAAA 59.770 36.000 0.00 0.00 33.76 1.94
61 62 4.735822 CCACTTTACGATTTTGTGCGAAAA 59.264 37.500 0.00 0.00 0.00 2.29
62 63 4.201930 ACCACTTTACGATTTTGTGCGAAA 60.202 37.500 0.00 0.00 0.00 3.46
63 64 3.312973 ACCACTTTACGATTTTGTGCGAA 59.687 39.130 0.00 0.00 0.00 4.70
64 65 2.873472 ACCACTTTACGATTTTGTGCGA 59.127 40.909 0.00 0.00 0.00 5.10
65 66 3.262135 ACCACTTTACGATTTTGTGCG 57.738 42.857 0.00 0.00 0.00 5.34
66 67 5.352643 ACTACCACTTTACGATTTTGTGC 57.647 39.130 0.00 0.00 0.00 4.57
67 68 8.623310 AAAAACTACCACTTTACGATTTTGTG 57.377 30.769 0.00 0.00 0.00 3.33
68 69 7.641020 CGAAAAACTACCACTTTACGATTTTGT 59.359 33.333 0.00 0.00 0.00 2.83
69 70 7.641020 ACGAAAAACTACCACTTTACGATTTTG 59.359 33.333 0.00 0.00 0.00 2.44
70 71 7.696755 ACGAAAAACTACCACTTTACGATTTT 58.303 30.769 0.00 0.00 0.00 1.82
71 72 7.011295 TGACGAAAAACTACCACTTTACGATTT 59.989 33.333 0.00 0.00 0.00 2.17
72 73 6.479660 TGACGAAAAACTACCACTTTACGATT 59.520 34.615 0.00 0.00 0.00 3.34
73 74 5.984926 TGACGAAAAACTACCACTTTACGAT 59.015 36.000 0.00 0.00 0.00 3.73
74 75 5.231991 GTGACGAAAAACTACCACTTTACGA 59.768 40.000 0.00 0.00 0.00 3.43
75 76 5.426240 GTGACGAAAAACTACCACTTTACG 58.574 41.667 0.00 0.00 0.00 3.18
76 77 5.426240 CGTGACGAAAAACTACCACTTTAC 58.574 41.667 0.00 0.00 0.00 2.01
77 78 4.507388 CCGTGACGAAAAACTACCACTTTA 59.493 41.667 6.54 0.00 0.00 1.85
78 79 3.310501 CCGTGACGAAAAACTACCACTTT 59.689 43.478 6.54 0.00 0.00 2.66
79 80 2.867975 CCGTGACGAAAAACTACCACTT 59.132 45.455 6.54 0.00 0.00 3.16
80 81 2.159057 ACCGTGACGAAAAACTACCACT 60.159 45.455 6.54 0.00 0.00 4.00
81 82 2.204237 ACCGTGACGAAAAACTACCAC 58.796 47.619 6.54 0.00 0.00 4.16
82 83 2.600470 ACCGTGACGAAAAACTACCA 57.400 45.000 6.54 0.00 0.00 3.25
83 84 2.221749 GGAACCGTGACGAAAAACTACC 59.778 50.000 6.54 0.00 0.00 3.18
84 85 2.097250 CGGAACCGTGACGAAAAACTAC 60.097 50.000 6.54 0.00 34.35 2.73
85 86 2.126467 CGGAACCGTGACGAAAAACTA 58.874 47.619 6.54 0.00 34.35 2.24
86 87 0.932399 CGGAACCGTGACGAAAAACT 59.068 50.000 6.54 0.00 34.35 2.66
87 88 3.426008 CGGAACCGTGACGAAAAAC 57.574 52.632 6.54 0.00 34.35 2.43
98 99 1.730064 CTACCACAATTCACGGAACCG 59.270 52.381 11.83 11.83 46.03 4.44
99 100 2.774687 ACTACCACAATTCACGGAACC 58.225 47.619 0.00 0.00 0.00 3.62
100 101 4.823790 AAACTACCACAATTCACGGAAC 57.176 40.909 0.00 0.00 0.00 3.62
101 102 5.450688 CCAAAAACTACCACAATTCACGGAA 60.451 40.000 0.00 0.00 0.00 4.30
102 103 4.036971 CCAAAAACTACCACAATTCACGGA 59.963 41.667 0.00 0.00 0.00 4.69
103 104 4.202070 ACCAAAAACTACCACAATTCACGG 60.202 41.667 0.00 0.00 0.00 4.94
104 105 4.927422 ACCAAAAACTACCACAATTCACG 58.073 39.130 0.00 0.00 0.00 4.35
105 106 8.705048 TTTAACCAAAAACTACCACAATTCAC 57.295 30.769 0.00 0.00 0.00 3.18
110 111 8.631797 GGAGTATTTAACCAAAAACTACCACAA 58.368 33.333 0.00 0.00 0.00 3.33
111 112 7.041235 CGGAGTATTTAACCAAAAACTACCACA 60.041 37.037 0.00 0.00 0.00 4.17
112 113 7.173047 TCGGAGTATTTAACCAAAAACTACCAC 59.827 37.037 0.00 0.00 0.00 4.16
113 114 7.222872 TCGGAGTATTTAACCAAAAACTACCA 58.777 34.615 0.00 0.00 0.00 3.25
114 115 7.671495 TCGGAGTATTTAACCAAAAACTACC 57.329 36.000 0.00 0.00 0.00 3.18
115 116 9.603298 CTTTCGGAGTATTTAACCAAAAACTAC 57.397 33.333 0.00 0.00 0.00 2.73
116 117 9.558396 TCTTTCGGAGTATTTAACCAAAAACTA 57.442 29.630 0.00 0.00 0.00 2.24
117 118 8.454570 TCTTTCGGAGTATTTAACCAAAAACT 57.545 30.769 0.00 0.00 0.00 2.66
118 119 9.518906 TTTCTTTCGGAGTATTTAACCAAAAAC 57.481 29.630 0.00 0.00 0.00 2.43
120 121 9.738832 CTTTTCTTTCGGAGTATTTAACCAAAA 57.261 29.630 0.00 0.00 0.00 2.44
121 122 9.122779 TCTTTTCTTTCGGAGTATTTAACCAAA 57.877 29.630 0.00 0.00 0.00 3.28
122 123 8.562052 GTCTTTTCTTTCGGAGTATTTAACCAA 58.438 33.333 0.00 0.00 0.00 3.67
123 124 7.716123 TGTCTTTTCTTTCGGAGTATTTAACCA 59.284 33.333 0.00 0.00 0.00 3.67
124 125 8.013947 GTGTCTTTTCTTTCGGAGTATTTAACC 58.986 37.037 0.00 0.00 0.00 2.85
125 126 8.553696 TGTGTCTTTTCTTTCGGAGTATTTAAC 58.446 33.333 0.00 0.00 0.00 2.01
126 127 8.665643 TGTGTCTTTTCTTTCGGAGTATTTAA 57.334 30.769 0.00 0.00 0.00 1.52
127 128 8.842358 ATGTGTCTTTTCTTTCGGAGTATTTA 57.158 30.769 0.00 0.00 0.00 1.40
128 129 7.661847 AGATGTGTCTTTTCTTTCGGAGTATTT 59.338 33.333 0.00 0.00 0.00 1.40
129 130 7.162082 AGATGTGTCTTTTCTTTCGGAGTATT 58.838 34.615 0.00 0.00 0.00 1.89
130 131 6.702329 AGATGTGTCTTTTCTTTCGGAGTAT 58.298 36.000 0.00 0.00 0.00 2.12
131 132 6.097915 AGATGTGTCTTTTCTTTCGGAGTA 57.902 37.500 0.00 0.00 0.00 2.59
132 133 4.962155 AGATGTGTCTTTTCTTTCGGAGT 58.038 39.130 0.00 0.00 0.00 3.85
133 134 5.931441 AAGATGTGTCTTTTCTTTCGGAG 57.069 39.130 0.00 0.00 41.92 4.63
144 145 7.880195 AGTAGTTATCTGCAAAAGATGTGTCTT 59.120 33.333 0.00 0.00 45.64 3.01
145 146 7.390027 AGTAGTTATCTGCAAAAGATGTGTCT 58.610 34.615 0.00 0.00 45.64 3.41
146 147 7.602517 AGTAGTTATCTGCAAAAGATGTGTC 57.397 36.000 0.00 0.00 45.64 3.67
147 148 7.148573 CGAAGTAGTTATCTGCAAAAGATGTGT 60.149 37.037 0.00 0.00 45.64 3.72
148 149 7.176075 CGAAGTAGTTATCTGCAAAAGATGTG 58.824 38.462 0.00 0.00 45.64 3.21
149 150 6.183360 GCGAAGTAGTTATCTGCAAAAGATGT 60.183 38.462 0.00 0.00 45.64 3.06
150 151 6.188175 GCGAAGTAGTTATCTGCAAAAGATG 58.812 40.000 0.00 0.00 45.64 2.90
152 153 4.630069 GGCGAAGTAGTTATCTGCAAAAGA 59.370 41.667 0.00 0.00 39.94 2.52
153 154 4.631813 AGGCGAAGTAGTTATCTGCAAAAG 59.368 41.667 0.00 0.00 0.00 2.27
154 155 4.575885 AGGCGAAGTAGTTATCTGCAAAA 58.424 39.130 0.00 0.00 0.00 2.44
155 156 4.202245 AGGCGAAGTAGTTATCTGCAAA 57.798 40.909 0.00 0.00 0.00 3.68
156 157 3.887621 AGGCGAAGTAGTTATCTGCAA 57.112 42.857 0.00 0.00 0.00 4.08
157 158 4.441079 GGTTAGGCGAAGTAGTTATCTGCA 60.441 45.833 0.00 0.00 0.00 4.41
158 159 4.049869 GGTTAGGCGAAGTAGTTATCTGC 58.950 47.826 0.00 0.00 0.00 4.26
159 160 5.258456 TGGTTAGGCGAAGTAGTTATCTG 57.742 43.478 0.00 0.00 0.00 2.90
160 161 5.927281 TTGGTTAGGCGAAGTAGTTATCT 57.073 39.130 0.00 0.00 0.00 1.98
161 162 6.973229 TTTTGGTTAGGCGAAGTAGTTATC 57.027 37.500 0.00 0.00 0.00 1.75
162 163 7.933215 ATTTTTGGTTAGGCGAAGTAGTTAT 57.067 32.000 0.00 0.00 0.00 1.89
163 164 7.229106 ACAATTTTTGGTTAGGCGAAGTAGTTA 59.771 33.333 0.00 0.00 34.12 2.24
164 165 6.040054 ACAATTTTTGGTTAGGCGAAGTAGTT 59.960 34.615 0.00 0.00 34.12 2.24
165 166 5.533528 ACAATTTTTGGTTAGGCGAAGTAGT 59.466 36.000 0.00 0.00 34.12 2.73
166 167 6.009115 ACAATTTTTGGTTAGGCGAAGTAG 57.991 37.500 0.00 0.00 34.12 2.57
167 168 6.394025 AACAATTTTTGGTTAGGCGAAGTA 57.606 33.333 0.00 0.00 34.12 2.24
168 169 4.929819 ACAATTTTTGGTTAGGCGAAGT 57.070 36.364 0.00 0.00 34.12 3.01
169 170 4.684242 GGAACAATTTTTGGTTAGGCGAAG 59.316 41.667 0.00 0.00 34.12 3.79
170 171 4.342665 AGGAACAATTTTTGGTTAGGCGAA 59.657 37.500 0.00 0.00 34.12 4.70
171 172 3.892588 AGGAACAATTTTTGGTTAGGCGA 59.107 39.130 0.00 0.00 34.12 5.54
172 173 4.251543 AGGAACAATTTTTGGTTAGGCG 57.748 40.909 0.00 0.00 34.12 5.52
173 174 6.052360 TGAAAGGAACAATTTTTGGTTAGGC 58.948 36.000 0.00 0.00 34.12 3.93
174 175 7.272244 ACTGAAAGGAACAATTTTTGGTTAGG 58.728 34.615 0.00 0.00 39.30 2.69
175 176 9.463443 CTACTGAAAGGAACAATTTTTGGTTAG 57.537 33.333 0.00 0.00 39.30 2.34
176 177 9.191479 TCTACTGAAAGGAACAATTTTTGGTTA 57.809 29.630 0.00 0.00 39.30 2.85
177 178 8.073467 TCTACTGAAAGGAACAATTTTTGGTT 57.927 30.769 0.00 0.00 39.30 3.67
178 179 7.654022 TCTACTGAAAGGAACAATTTTTGGT 57.346 32.000 0.00 0.00 39.30 3.67
179 180 8.143835 ACATCTACTGAAAGGAACAATTTTTGG 58.856 33.333 0.00 0.00 39.30 3.28
182 183 9.574516 AGTACATCTACTGAAAGGAACAATTTT 57.425 29.630 0.00 0.00 39.30 1.82
197 198 0.747255 CCAGGCGCAGTACATCTACT 59.253 55.000 10.83 0.00 33.01 2.57
198 199 0.460311 ACCAGGCGCAGTACATCTAC 59.540 55.000 10.83 0.00 0.00 2.59
199 200 1.679680 GTACCAGGCGCAGTACATCTA 59.320 52.381 22.27 0.00 38.94 1.98
200 201 0.460311 GTACCAGGCGCAGTACATCT 59.540 55.000 22.27 2.45 38.94 2.90
201 202 0.174845 TGTACCAGGCGCAGTACATC 59.825 55.000 24.63 7.92 42.87 3.06
202 203 0.611200 TTGTACCAGGCGCAGTACAT 59.389 50.000 27.19 5.90 45.99 2.29
203 204 0.393448 TTTGTACCAGGCGCAGTACA 59.607 50.000 24.63 24.63 45.29 2.90
204 205 1.396996 CATTTGTACCAGGCGCAGTAC 59.603 52.381 21.09 21.09 39.44 2.73
205 206 1.677518 CCATTTGTACCAGGCGCAGTA 60.678 52.381 10.83 4.74 0.00 2.74
206 207 0.960364 CCATTTGTACCAGGCGCAGT 60.960 55.000 10.83 5.90 0.00 4.40
207 208 0.960364 ACCATTTGTACCAGGCGCAG 60.960 55.000 10.83 0.00 0.00 5.18
208 209 0.538516 AACCATTTGTACCAGGCGCA 60.539 50.000 10.83 0.00 0.00 6.09
209 210 1.400494 CTAACCATTTGTACCAGGCGC 59.600 52.381 0.00 0.00 0.00 6.53
210 211 2.980568 TCTAACCATTTGTACCAGGCG 58.019 47.619 0.00 0.00 0.00 5.52
211 212 5.914898 AATTCTAACCATTTGTACCAGGC 57.085 39.130 0.00 0.00 0.00 4.85
212 213 7.832187 TCCTAAATTCTAACCATTTGTACCAGG 59.168 37.037 0.00 0.00 0.00 4.45
213 214 8.674607 GTCCTAAATTCTAACCATTTGTACCAG 58.325 37.037 0.00 0.00 0.00 4.00
214 215 8.387813 AGTCCTAAATTCTAACCATTTGTACCA 58.612 33.333 0.00 0.00 0.00 3.25
215 216 8.674607 CAGTCCTAAATTCTAACCATTTGTACC 58.325 37.037 0.00 0.00 0.00 3.34
216 217 8.182227 GCAGTCCTAAATTCTAACCATTTGTAC 58.818 37.037 0.00 0.00 0.00 2.90
217 218 7.885922 TGCAGTCCTAAATTCTAACCATTTGTA 59.114 33.333 0.00 0.00 0.00 2.41
218 219 6.719370 TGCAGTCCTAAATTCTAACCATTTGT 59.281 34.615 0.00 0.00 0.00 2.83
219 220 7.156876 TGCAGTCCTAAATTCTAACCATTTG 57.843 36.000 0.00 0.00 0.00 2.32
220 221 7.961326 ATGCAGTCCTAAATTCTAACCATTT 57.039 32.000 0.00 0.00 0.00 2.32
221 222 7.229506 GCTATGCAGTCCTAAATTCTAACCATT 59.770 37.037 0.00 0.00 0.00 3.16
222 223 6.712547 GCTATGCAGTCCTAAATTCTAACCAT 59.287 38.462 0.00 0.00 0.00 3.55
223 224 6.055588 GCTATGCAGTCCTAAATTCTAACCA 58.944 40.000 0.00 0.00 0.00 3.67
224 225 5.470437 GGCTATGCAGTCCTAAATTCTAACC 59.530 44.000 0.00 0.00 0.00 2.85
225 226 6.292150 AGGCTATGCAGTCCTAAATTCTAAC 58.708 40.000 2.69 0.00 0.00 2.34
226 227 6.500589 AGGCTATGCAGTCCTAAATTCTAA 57.499 37.500 2.69 0.00 0.00 2.10
227 228 7.454694 TGATAGGCTATGCAGTCCTAAATTCTA 59.545 37.037 12.68 0.00 35.52 2.10
228 229 6.270927 TGATAGGCTATGCAGTCCTAAATTCT 59.729 38.462 12.68 0.29 35.52 2.40
229 230 6.370166 GTGATAGGCTATGCAGTCCTAAATTC 59.630 42.308 12.68 8.70 35.52 2.17
230 231 6.234177 GTGATAGGCTATGCAGTCCTAAATT 58.766 40.000 12.68 0.88 35.52 1.82
231 232 5.280215 GGTGATAGGCTATGCAGTCCTAAAT 60.280 44.000 12.68 2.28 35.52 1.40
232 233 4.040461 GGTGATAGGCTATGCAGTCCTAAA 59.960 45.833 12.68 5.05 35.52 1.85
233 234 3.578716 GGTGATAGGCTATGCAGTCCTAA 59.421 47.826 12.68 0.00 35.52 2.69
234 235 3.165875 GGTGATAGGCTATGCAGTCCTA 58.834 50.000 12.68 12.11 36.00 2.94
235 236 1.974236 GGTGATAGGCTATGCAGTCCT 59.026 52.381 12.68 8.88 34.15 3.85
236 237 1.337260 CGGTGATAGGCTATGCAGTCC 60.337 57.143 12.68 7.43 0.00 3.85
237 238 1.341531 ACGGTGATAGGCTATGCAGTC 59.658 52.381 12.68 0.00 0.00 3.51
238 239 1.414158 ACGGTGATAGGCTATGCAGT 58.586 50.000 12.68 8.47 0.00 4.40
239 240 2.533266 AACGGTGATAGGCTATGCAG 57.467 50.000 12.68 7.86 0.00 4.41
240 241 2.169561 TGAAACGGTGATAGGCTATGCA 59.830 45.455 12.68 7.12 0.00 3.96
241 242 2.802816 CTGAAACGGTGATAGGCTATGC 59.197 50.000 12.68 4.51 0.00 3.14
242 243 2.802816 GCTGAAACGGTGATAGGCTATG 59.197 50.000 12.68 0.00 0.00 2.23
243 244 2.434336 TGCTGAAACGGTGATAGGCTAT 59.566 45.455 6.76 6.76 0.00 2.97
244 245 1.828595 TGCTGAAACGGTGATAGGCTA 59.171 47.619 0.00 0.00 0.00 3.93
245 246 0.613260 TGCTGAAACGGTGATAGGCT 59.387 50.000 0.00 0.00 0.00 4.58
246 247 1.331756 CATGCTGAAACGGTGATAGGC 59.668 52.381 0.00 0.00 0.00 3.93
247 248 2.632377 ACATGCTGAAACGGTGATAGG 58.368 47.619 0.00 0.00 0.00 2.57
248 249 4.685169 AAACATGCTGAAACGGTGATAG 57.315 40.909 0.00 0.00 0.00 2.08
249 250 5.009110 TGAAAAACATGCTGAAACGGTGATA 59.991 36.000 0.00 0.00 0.00 2.15
250 251 4.202101 TGAAAAACATGCTGAAACGGTGAT 60.202 37.500 0.00 0.00 0.00 3.06
251 252 3.129462 TGAAAAACATGCTGAAACGGTGA 59.871 39.130 0.00 0.00 0.00 4.02
252 253 3.443037 TGAAAAACATGCTGAAACGGTG 58.557 40.909 0.00 0.00 0.00 4.94
253 254 3.490761 CCTGAAAAACATGCTGAAACGGT 60.491 43.478 0.00 0.00 0.00 4.83
254 255 3.052036 CCTGAAAAACATGCTGAAACGG 58.948 45.455 0.00 0.00 0.00 4.44
255 256 3.963665 TCCTGAAAAACATGCTGAAACG 58.036 40.909 0.00 0.00 0.00 3.60
256 257 4.209911 GCTTCCTGAAAAACATGCTGAAAC 59.790 41.667 0.00 0.00 0.00 2.78
257 258 4.141981 TGCTTCCTGAAAAACATGCTGAAA 60.142 37.500 0.00 0.00 0.00 2.69
258 259 3.384146 TGCTTCCTGAAAAACATGCTGAA 59.616 39.130 0.00 0.00 0.00 3.02
259 260 2.957680 TGCTTCCTGAAAAACATGCTGA 59.042 40.909 0.00 0.00 0.00 4.26
260 261 3.005050 TCTGCTTCCTGAAAAACATGCTG 59.995 43.478 0.00 0.00 0.00 4.41
261 262 3.225104 TCTGCTTCCTGAAAAACATGCT 58.775 40.909 0.00 0.00 0.00 3.79
262 263 3.648339 TCTGCTTCCTGAAAAACATGC 57.352 42.857 0.00 0.00 0.00 4.06
286 287 6.488344 TGAGGTAGATAGAGTAGCAATCTGTG 59.512 42.308 0.00 0.00 32.39 3.66
300 301 7.040062 AGGAGAACAATTCGATGAGGTAGATAG 60.040 40.741 0.00 0.00 34.02 2.08
301 302 6.778069 AGGAGAACAATTCGATGAGGTAGATA 59.222 38.462 0.00 0.00 34.02 1.98
302 303 5.600484 AGGAGAACAATTCGATGAGGTAGAT 59.400 40.000 0.00 0.00 34.02 1.98
303 304 4.956700 AGGAGAACAATTCGATGAGGTAGA 59.043 41.667 0.00 0.00 34.02 2.59
304 305 5.269505 AGGAGAACAATTCGATGAGGTAG 57.730 43.478 0.00 0.00 34.02 3.18
312 313 7.979444 ATGAACTAAAAGGAGAACAATTCGA 57.021 32.000 0.00 0.00 34.02 3.71
325 326 6.753744 GCAAAGCCCAGATAATGAACTAAAAG 59.246 38.462 0.00 0.00 0.00 2.27
337 338 2.658285 CTCCATTGCAAAGCCCAGATA 58.342 47.619 1.71 0.00 0.00 1.98
338 339 1.481871 CTCCATTGCAAAGCCCAGAT 58.518 50.000 1.71 0.00 0.00 2.90
339 340 0.612732 CCTCCATTGCAAAGCCCAGA 60.613 55.000 1.71 0.00 0.00 3.86
343 344 3.893326 AATAACCTCCATTGCAAAGCC 57.107 42.857 1.71 0.00 0.00 4.35
354 355 6.989659 TGTATACCAGATCGAAATAACCTCC 58.010 40.000 0.00 0.00 0.00 4.30
358 359 8.062448 GCTGTTTGTATACCAGATCGAAATAAC 58.938 37.037 10.69 0.00 0.00 1.89
386 387 7.551617 TCCGAGCAAAGTATATGACTCGATATA 59.448 37.037 11.42 0.00 42.03 0.86
448 449 0.519961 TTTAGAAAAGGAAGCGCCGC 59.480 50.000 2.29 0.00 43.43 6.53
449 450 1.533731 TGTTTAGAAAAGGAAGCGCCG 59.466 47.619 2.29 0.00 43.43 6.46
464 465 6.368791 GCTGACGGCATTCATCTATATGTTTA 59.631 38.462 0.00 0.00 41.35 2.01
466 467 4.692625 GCTGACGGCATTCATCTATATGTT 59.307 41.667 0.00 0.00 41.35 2.71
502 505 5.354234 CCACACAGACCATTTACAGGTAATC 59.646 44.000 0.00 0.00 40.09 1.75
503 507 5.222048 ACCACACAGACCATTTACAGGTAAT 60.222 40.000 0.00 0.00 40.09 1.89
505 509 3.649023 ACCACACAGACCATTTACAGGTA 59.351 43.478 0.00 0.00 40.09 3.08
507 511 3.074412 GACCACACAGACCATTTACAGG 58.926 50.000 0.00 0.00 0.00 4.00
508 512 3.498397 GTGACCACACAGACCATTTACAG 59.502 47.826 0.00 0.00 45.32 2.74
560 564 7.769044 GGAGCAGAGTATAATGGTCTACAAAAA 59.231 37.037 10.90 0.00 42.24 1.94
569 573 4.141620 CCAACAGGAGCAGAGTATAATGGT 60.142 45.833 0.00 0.00 0.00 3.55
570 574 4.141620 ACCAACAGGAGCAGAGTATAATGG 60.142 45.833 0.00 0.00 0.00 3.16
640 644 6.769822 AGAATGAGGTGCATGACTAAAATAGG 59.230 38.462 0.00 0.00 37.28 2.57
702 729 2.135933 CTGCAGTAAGTATTAGCCGCC 58.864 52.381 5.25 0.00 0.00 6.13
710 737 4.935808 GGTAACAACAGCTGCAGTAAGTAT 59.064 41.667 15.27 0.00 0.00 2.12
757 784 0.893447 ACGACCTAACCTGGCACTAC 59.107 55.000 0.00 0.00 0.00 2.73
758 785 2.094675 GTACGACCTAACCTGGCACTA 58.905 52.381 0.00 0.00 0.00 2.74
865 910 9.182214 TCAGCTCAATTTTATAAGAAAGCTGAT 57.818 29.630 23.06 2.36 46.37 2.90
976 1301 4.292186 TGCAAAGCCTACAAGAGAAGAT 57.708 40.909 0.00 0.00 0.00 2.40
1035 1360 0.744771 GGCTTAGAAGTTCGGGCAGG 60.745 60.000 15.57 0.00 0.00 4.85
1037 1362 0.690762 AAGGCTTAGAAGTTCGGGCA 59.309 50.000 17.06 0.00 0.00 5.36
1068 1393 0.032017 GGTCAGCTAGGGAAGGGAGA 60.032 60.000 0.00 0.00 0.00 3.71
1129 1454 2.203195 AAGCGGTTGCAGCAGACA 60.203 55.556 4.63 0.00 46.23 3.41
1155 1480 1.077429 GAGGGTGAGCCATGGGAAC 60.077 63.158 15.13 0.00 36.17 3.62
1179 1504 2.434336 TGGGATACAGAGGAATGTTCCG 59.566 50.000 6.16 0.00 46.59 4.30
1192 1517 1.457643 CCTCGCCTCCTGGGATACA 60.458 63.158 0.00 0.00 37.23 2.29
1194 1519 0.759436 GAACCTCGCCTCCTGGGATA 60.759 60.000 0.00 0.00 37.23 2.59
1241 1566 0.392461 GATGGAGCCACGGCAACTAA 60.392 55.000 11.35 0.00 44.88 2.24
1284 1609 4.200874 TCAATGTGCATGCATCATCACTA 58.799 39.130 25.64 11.57 0.00 2.74
1323 1648 3.876309 TTAGGAAGCTCCAAAGTGGTT 57.124 42.857 5.21 0.00 39.61 3.67
1329 1654 3.846588 AGACCAGATTAGGAAGCTCCAAA 59.153 43.478 5.21 0.00 39.61 3.28
1373 1699 5.067936 AGTTGTGTAGGATCAGATTCGTAGG 59.932 44.000 0.00 0.00 0.00 3.18
1426 1754 2.104963 GGGAATCAGGTGATAGGTCCAC 59.895 54.545 10.13 0.00 32.96 4.02
1454 1782 2.291365 CTTCGTCCATCATCAATGCCA 58.709 47.619 0.00 0.00 33.71 4.92
1464 1792 7.709613 ACTGTACCAATATTAACTTCGTCCATC 59.290 37.037 0.00 0.00 0.00 3.51
1475 1805 8.410141 GGCTAATGCAAACTGTACCAATATTAA 58.590 33.333 0.00 0.00 41.91 1.40
1557 1899 5.030295 CCATCAAAGAACGCAACATCATAC 58.970 41.667 0.00 0.00 0.00 2.39
1600 1942 2.372264 GATGAAGAGCTTGCCAATGGA 58.628 47.619 2.05 0.00 0.00 3.41
1656 1998 6.808212 CCAAAGACTCAATTACGCATTTGATT 59.192 34.615 0.00 0.00 31.83 2.57
1685 2027 3.420893 CATTCTGGTACTCCAAGGCAAA 58.579 45.455 0.00 0.00 43.81 3.68
1689 2031 1.066143 ACGCATTCTGGTACTCCAAGG 60.066 52.381 0.00 0.00 43.81 3.61
1708 2050 2.835027 ACACACTTTCTCTCCGGAAAC 58.165 47.619 5.23 0.00 32.63 2.78
1714 2056 4.932200 CCTGAATGTACACACTTTCTCTCC 59.068 45.833 0.00 0.00 38.82 3.71
1720 2064 7.224297 AGATACAACCTGAATGTACACACTTT 58.776 34.615 0.00 0.00 36.19 2.66
1755 2099 1.275291 ACCATCAACAGTCTACCACCG 59.725 52.381 0.00 0.00 0.00 4.94
1821 2177 8.310122 ACCCAATAGTCTGCATATTTTCAAAT 57.690 30.769 0.00 0.00 0.00 2.32
1895 2251 0.036732 GCCACCCAACTCACTGATCA 59.963 55.000 0.00 0.00 0.00 2.92
1933 2289 0.990374 AGAGACTTGGAGCCATGCTT 59.010 50.000 2.61 0.00 39.88 3.91
2013 3067 6.962182 TGGACTCATAGAGAATTTTGGATGT 58.038 36.000 0.31 0.00 33.32 3.06
2022 3076 8.032045 AGTCATGAAATGGACTCATAGAGAAT 57.968 34.615 0.00 0.00 46.73 2.40
2025 3079 6.924612 CAGAGTCATGAAATGGACTCATAGAG 59.075 42.308 20.12 0.00 45.52 2.43
2029 3083 4.226846 ACCAGAGTCATGAAATGGACTCAT 59.773 41.667 22.46 6.14 45.52 2.90
2065 3120 0.183731 GGTGTGATCCTCCCATTCCC 59.816 60.000 0.00 0.00 0.00 3.97
2163 3222 4.395854 GGCATACACATGACAATCTGTGAA 59.604 41.667 13.30 0.00 44.35 3.18
2165 3224 3.943381 AGGCATACACATGACAATCTGTG 59.057 43.478 0.00 6.19 43.34 3.66
2173 3283 6.968904 CAGAACAAATTAGGCATACACATGAC 59.031 38.462 0.00 0.00 40.92 3.06
2178 3288 5.123820 TCAGCAGAACAAATTAGGCATACAC 59.876 40.000 0.00 0.00 0.00 2.90
2190 3300 3.443329 TCACAAAGCTTCAGCAGAACAAA 59.557 39.130 0.00 0.00 45.16 2.83
2226 3343 1.858091 AGGATAAAGATGACAGCGCG 58.142 50.000 0.00 0.00 0.00 6.86
2270 3389 9.061610 GGTTGATCAACATACAAATTAAGAACG 57.938 33.333 33.42 0.00 42.85 3.95
2287 3406 2.158475 AGAACAAGGCTGGGTTGATCAA 60.158 45.455 3.38 3.38 31.06 2.57
2315 3434 2.446435 TGAGATAGCCCCAGCAAAAAC 58.554 47.619 0.00 0.00 43.56 2.43
2319 3438 1.216064 ACATGAGATAGCCCCAGCAA 58.784 50.000 0.00 0.00 43.56 3.91
2321 3440 1.002544 GGTACATGAGATAGCCCCAGC 59.997 57.143 0.00 0.00 40.32 4.85
2324 3443 2.037772 CTGTGGTACATGAGATAGCCCC 59.962 54.545 0.00 0.00 44.52 5.80
2326 3445 4.672587 TTCTGTGGTACATGAGATAGCC 57.327 45.455 0.00 0.00 44.52 3.93
2332 3451 5.639506 AGTTCGAAATTCTGTGGTACATGAG 59.360 40.000 0.00 0.00 44.52 2.90
2334 3453 5.862924 AGTTCGAAATTCTGTGGTACATG 57.137 39.130 0.00 0.00 44.52 3.21
2338 3457 9.672086 CAATTAAAAGTTCGAAATTCTGTGGTA 57.328 29.630 11.71 0.00 0.00 3.25
2340 3459 7.651704 ACCAATTAAAAGTTCGAAATTCTGTGG 59.348 33.333 11.71 15.44 0.00 4.17
2341 3460 8.574196 ACCAATTAAAAGTTCGAAATTCTGTG 57.426 30.769 11.71 6.01 0.00 3.66
2347 3466 9.801873 CCATCATACCAATTAAAAGTTCGAAAT 57.198 29.630 0.00 0.00 0.00 2.17
2350 3469 7.392113 ACACCATCATACCAATTAAAAGTTCGA 59.608 33.333 0.00 0.00 0.00 3.71
2351 3470 7.484641 CACACCATCATACCAATTAAAAGTTCG 59.515 37.037 0.00 0.00 0.00 3.95
2364 3483 2.710377 TGAAGTGCACACCATCATACC 58.290 47.619 21.04 0.00 0.00 2.73
2377 3496 6.268566 GGACCATTGATAAGATTTGAAGTGC 58.731 40.000 0.00 0.00 0.00 4.40
2400 3519 5.508489 GCACATCTGAATACATCCAATTGGG 60.508 44.000 24.29 11.71 35.41 4.12
2402 3521 6.139048 TGCACATCTGAATACATCCAATTG 57.861 37.500 0.00 0.00 0.00 2.32
2403 3522 6.379133 AGTTGCACATCTGAATACATCCAATT 59.621 34.615 0.00 0.00 0.00 2.32
2405 3524 5.255687 AGTTGCACATCTGAATACATCCAA 58.744 37.500 0.00 0.00 0.00 3.53
2416 3536 5.117355 ACAAAGATCAAGTTGCACATCTG 57.883 39.130 6.37 0.52 0.00 2.90
2417 3537 5.779529 AACAAAGATCAAGTTGCACATCT 57.220 34.783 0.00 0.00 0.00 2.90
2430 3550 8.715191 ATAGTCTCATCACTCAAACAAAGATC 57.285 34.615 0.00 0.00 0.00 2.75
2434 3554 8.721478 GCTTAATAGTCTCATCACTCAAACAAA 58.279 33.333 0.00 0.00 0.00 2.83
2439 3559 7.014711 CCCTAGCTTAATAGTCTCATCACTCAA 59.985 40.741 0.00 0.00 0.00 3.02
2449 3569 5.047943 CGTACATGCCCTAGCTTAATAGTCT 60.048 44.000 0.00 0.00 40.80 3.24
2451 3571 4.587684 ACGTACATGCCCTAGCTTAATAGT 59.412 41.667 0.00 0.00 40.80 2.12
2452 3572 4.923871 CACGTACATGCCCTAGCTTAATAG 59.076 45.833 0.00 0.00 40.80 1.73
2453 3573 4.585581 TCACGTACATGCCCTAGCTTAATA 59.414 41.667 0.00 0.00 40.80 0.98
2454 3574 3.386726 TCACGTACATGCCCTAGCTTAAT 59.613 43.478 0.00 0.00 40.80 1.40
2463 3583 0.519961 GGTTGTTCACGTACATGCCC 59.480 55.000 0.00 0.00 0.00 5.36
2464 3584 1.519408 AGGTTGTTCACGTACATGCC 58.481 50.000 0.00 0.00 0.00 4.40
2469 3589 3.872771 TCCAGAAAAGGTTGTTCACGTAC 59.127 43.478 0.00 0.00 0.00 3.67
2471 3591 2.943033 CTCCAGAAAAGGTTGTTCACGT 59.057 45.455 0.00 0.00 0.00 4.49
2472 3592 2.290641 CCTCCAGAAAAGGTTGTTCACG 59.709 50.000 0.00 0.00 0.00 4.35
2473 3593 3.066760 CACCTCCAGAAAAGGTTGTTCAC 59.933 47.826 0.00 0.00 44.93 3.18
2474 3594 3.053991 TCACCTCCAGAAAAGGTTGTTCA 60.054 43.478 0.00 0.00 44.93 3.18
2475 3595 3.551846 TCACCTCCAGAAAAGGTTGTTC 58.448 45.455 0.00 0.00 44.93 3.18
2476 3596 3.662759 TCACCTCCAGAAAAGGTTGTT 57.337 42.857 0.00 0.00 44.93 2.83
2477 3597 3.662759 TTCACCTCCAGAAAAGGTTGT 57.337 42.857 0.00 0.00 44.93 3.32
2481 3601 6.294731 CCAAGTTTATTCACCTCCAGAAAAGG 60.295 42.308 0.00 0.00 39.96 3.11
2482 3602 6.294731 CCCAAGTTTATTCACCTCCAGAAAAG 60.295 42.308 0.00 0.00 0.00 2.27
2483 3603 5.538433 CCCAAGTTTATTCACCTCCAGAAAA 59.462 40.000 0.00 0.00 0.00 2.29
2484 3604 5.076873 CCCAAGTTTATTCACCTCCAGAAA 58.923 41.667 0.00 0.00 0.00 2.52
2486 3606 3.655777 ACCCAAGTTTATTCACCTCCAGA 59.344 43.478 0.00 0.00 0.00 3.86
2487 3607 3.758554 CACCCAAGTTTATTCACCTCCAG 59.241 47.826 0.00 0.00 0.00 3.86
2488 3608 3.139397 ACACCCAAGTTTATTCACCTCCA 59.861 43.478 0.00 0.00 0.00 3.86
2489 3609 3.763057 ACACCCAAGTTTATTCACCTCC 58.237 45.455 0.00 0.00 0.00 4.30
2490 3610 5.300792 TGAAACACCCAAGTTTATTCACCTC 59.699 40.000 0.00 0.00 41.48 3.85
2491 3611 5.205056 TGAAACACCCAAGTTTATTCACCT 58.795 37.500 0.00 0.00 41.48 4.00
2493 3613 7.328493 GCTAATGAAACACCCAAGTTTATTCAC 59.672 37.037 0.00 0.00 41.48 3.18
2494 3614 7.375053 GCTAATGAAACACCCAAGTTTATTCA 58.625 34.615 0.00 0.00 41.48 2.57
2498 3621 5.141182 TGGCTAATGAAACACCCAAGTTTA 58.859 37.500 0.00 0.00 41.48 2.01
2511 3634 6.461927 GCAATCAGGATTCAATGGCTAATGAA 60.462 38.462 2.79 2.79 39.66 2.57
2512 3635 5.010314 GCAATCAGGATTCAATGGCTAATGA 59.990 40.000 0.00 0.00 0.00 2.57
2515 3638 4.340097 CAGCAATCAGGATTCAATGGCTAA 59.660 41.667 4.20 0.00 0.00 3.09
2518 3641 2.802057 GCAGCAATCAGGATTCAATGGC 60.802 50.000 0.00 0.00 0.00 4.40
2522 3645 2.097036 CAGGCAGCAATCAGGATTCAA 58.903 47.619 0.00 0.00 0.00 2.69
2536 3659 1.377725 CAGTAACCCCTGCAGGCAG 60.378 63.158 28.39 22.02 43.26 4.85
2541 3664 2.582052 CAAAACTCAGTAACCCCTGCA 58.418 47.619 0.00 0.00 32.32 4.41
2542 3665 1.269723 GCAAAACTCAGTAACCCCTGC 59.730 52.381 0.00 0.00 32.32 4.85
2543 3666 2.814336 GAGCAAAACTCAGTAACCCCTG 59.186 50.000 0.00 0.00 45.49 4.45
2544 3667 3.141767 GAGCAAAACTCAGTAACCCCT 57.858 47.619 0.00 0.00 45.49 4.79
2568 3691 7.120285 CCAAGCAATCCGAAATATGATCATAGT 59.880 37.037 19.73 15.08 0.00 2.12
2574 3697 3.890756 TGCCAAGCAATCCGAAATATGAT 59.109 39.130 0.00 0.00 34.76 2.45
2579 3702 1.474077 GAGTGCCAAGCAATCCGAAAT 59.526 47.619 5.76 0.00 46.03 2.17
2593 3716 2.048603 GCCTTCACATGGGAGTGCC 61.049 63.158 9.08 0.00 39.35 5.01
2595 3718 1.171308 CTTGCCTTCACATGGGAGTG 58.829 55.000 0.00 0.00 40.85 3.51
2601 3724 3.492011 GCAAAGAAACTTGCCTTCACATG 59.508 43.478 0.00 0.00 44.88 3.21
2614 3737 7.420800 TCTCATCTCAAAAGAAGCAAAGAAAC 58.579 34.615 0.00 0.00 34.49 2.78
2619 3742 8.415553 TGATTTTCTCATCTCAAAAGAAGCAAA 58.584 29.630 0.00 0.00 34.49 3.68
2620 3743 7.944061 TGATTTTCTCATCTCAAAAGAAGCAA 58.056 30.769 0.00 0.00 34.49 3.91
2621 3744 7.514784 TGATTTTCTCATCTCAAAAGAAGCA 57.485 32.000 0.00 0.00 34.49 3.91
2622 3745 8.983307 AATGATTTTCTCATCTCAAAAGAAGC 57.017 30.769 0.00 0.00 44.03 3.86
2645 3768 8.757877 GCTCTTAGGACCATTCATAGATAGAAT 58.242 37.037 0.00 0.00 36.19 2.40
2646 3769 7.730332 TGCTCTTAGGACCATTCATAGATAGAA 59.270 37.037 0.00 0.00 0.00 2.10
2647 3770 7.241628 TGCTCTTAGGACCATTCATAGATAGA 58.758 38.462 0.00 0.00 0.00 1.98
2648 3771 7.473735 TGCTCTTAGGACCATTCATAGATAG 57.526 40.000 0.00 0.00 0.00 2.08
2649 3772 7.898100 AGATGCTCTTAGGACCATTCATAGATA 59.102 37.037 0.00 0.00 0.00 1.98
2650 3773 6.730038 AGATGCTCTTAGGACCATTCATAGAT 59.270 38.462 0.00 0.00 0.00 1.98
2651 3774 6.080682 AGATGCTCTTAGGACCATTCATAGA 58.919 40.000 0.00 0.00 0.00 1.98
2652 3775 6.357579 AGATGCTCTTAGGACCATTCATAG 57.642 41.667 0.00 0.00 0.00 2.23
2653 3776 5.247110 GGAGATGCTCTTAGGACCATTCATA 59.753 44.000 0.00 0.00 0.00 2.15
2654 3777 4.041444 GGAGATGCTCTTAGGACCATTCAT 59.959 45.833 0.00 0.00 0.00 2.57
2655 3778 3.389329 GGAGATGCTCTTAGGACCATTCA 59.611 47.826 0.00 0.00 0.00 2.57
2656 3779 3.389329 TGGAGATGCTCTTAGGACCATTC 59.611 47.826 0.00 0.00 0.00 2.67
2657 3780 3.387962 TGGAGATGCTCTTAGGACCATT 58.612 45.455 0.00 0.00 0.00 3.16
2658 3781 3.051940 TGGAGATGCTCTTAGGACCAT 57.948 47.619 0.00 0.00 0.00 3.55
2659 3782 2.550277 TGGAGATGCTCTTAGGACCA 57.450 50.000 0.00 0.00 0.00 4.02
2660 3783 2.301583 GGATGGAGATGCTCTTAGGACC 59.698 54.545 0.00 0.00 0.00 4.46
2661 3784 2.029470 CGGATGGAGATGCTCTTAGGAC 60.029 54.545 0.00 0.00 0.00 3.85
2662 3785 2.242926 CGGATGGAGATGCTCTTAGGA 58.757 52.381 0.00 0.00 0.00 2.94
2663 3786 1.967066 ACGGATGGAGATGCTCTTAGG 59.033 52.381 0.00 0.00 0.00 2.69
2725 3852 2.125269 AGGCCGATTTTAGCGCGT 60.125 55.556 8.43 0.00 0.00 6.01
2726 3853 2.324477 CAGGCCGATTTTAGCGCG 59.676 61.111 0.00 0.00 0.00 6.86
2817 3948 8.756864 GTGTTTTGCCGAATTTTAGACAAATAA 58.243 29.630 0.00 0.00 0.00 1.40
2840 3971 5.220586 CGCCGAGATAATGTAATGTTTGTGT 60.221 40.000 0.00 0.00 0.00 3.72
2841 3972 5.006261 TCGCCGAGATAATGTAATGTTTGTG 59.994 40.000 0.00 0.00 0.00 3.33
2843 3974 5.651172 TCGCCGAGATAATGTAATGTTTG 57.349 39.130 0.00 0.00 0.00 2.93


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.