Multiple sequence alignment - TraesCS4A01G396400

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G396400 chr4A 100.000 6491 0 0 1 6491 671638219 671644709 0.000000e+00 11987.0
1 TraesCS4A01G396400 chr4A 84.264 1271 135 24 4370 5607 671601221 671602459 0.000000e+00 1179.0
2 TraesCS4A01G396400 chr4A 80.524 1222 194 30 4441 5637 671526139 671527341 0.000000e+00 898.0
3 TraesCS4A01G396400 chr4A 83.894 714 93 12 1755 2457 671524508 671525210 0.000000e+00 662.0
4 TraesCS4A01G396400 chr4A 80.856 888 86 52 267 1120 671522562 671523399 7.150000e-174 621.0
5 TraesCS4A01G396400 chr4A 81.114 826 71 49 610 1403 671596667 671597439 3.370000e-162 582.0
6 TraesCS4A01G396400 chr4A 81.766 702 97 22 1489 2172 671597600 671598288 5.680000e-155 558.0
7 TraesCS4A01G396400 chr4A 89.130 230 11 6 1174 1401 671523519 671523736 2.310000e-69 274.0
8 TraesCS4A01G396400 chr4A 85.992 257 21 8 3753 3994 59307277 59307021 1.800000e-65 261.0
9 TraesCS4A01G396400 chr4A 81.496 254 33 9 2209 2458 671598292 671598535 5.130000e-46 196.0
10 TraesCS4A01G396400 chr4A 90.411 146 11 3 2798 2941 671525595 671525739 8.590000e-44 189.0
11 TraesCS4A01G396400 chr4A 82.550 149 21 5 5687 5833 671558549 671558694 6.830000e-25 126.0
12 TraesCS4A01G396400 chr4A 95.238 63 3 0 1425 1487 671523813 671523875 4.140000e-17 100.0
13 TraesCS4A01G396400 chr7D 90.310 1290 80 16 4351 5616 55390764 55392032 0.000000e+00 1648.0
14 TraesCS4A01G396400 chr7D 92.228 1068 60 9 1423 2471 55388019 55389082 0.000000e+00 1491.0
15 TraesCS4A01G396400 chr7D 83.433 1334 149 41 4251 5561 55377927 55379211 0.000000e+00 1173.0
16 TraesCS4A01G396400 chr7D 81.008 1190 186 29 4475 5637 55269805 55270981 0.000000e+00 909.0
17 TraesCS4A01G396400 chr7D 80.908 1189 189 24 4475 5637 55252723 55253899 0.000000e+00 904.0
18 TraesCS4A01G396400 chr7D 88.144 776 44 14 5748 6488 55392058 55392820 0.000000e+00 880.0
19 TraesCS4A01G396400 chr7D 87.148 817 43 37 610 1396 55387136 55387920 0.000000e+00 870.0
20 TraesCS4A01G396400 chr7D 84.817 876 100 22 1601 2457 55267838 55268699 0.000000e+00 850.0
21 TraesCS4A01G396400 chr7D 85.680 831 65 34 610 1403 55374179 55374992 0.000000e+00 826.0
22 TraesCS4A01G396400 chr7D 91.040 625 23 9 1 607 55386490 55387099 0.000000e+00 813.0
23 TraesCS4A01G396400 chr7D 82.399 1017 99 43 2773 3731 55389104 55390098 0.000000e+00 813.0
24 TraesCS4A01G396400 chr7D 83.743 855 112 18 1616 2457 55250779 55251619 0.000000e+00 784.0
25 TraesCS4A01G396400 chr7D 80.151 1194 98 80 1 1121 55266219 55267346 0.000000e+00 763.0
26 TraesCS4A01G396400 chr7D 81.993 883 111 34 1594 2456 55375193 55376047 0.000000e+00 706.0
27 TraesCS4A01G396400 chr7D 78.029 842 67 61 610 1403 55249842 55250613 7.780000e-114 422.0
28 TraesCS4A01G396400 chr7D 93.594 281 18 0 2819 3099 55376157 55376437 2.800000e-113 420.0
29 TraesCS4A01G396400 chr7D 78.744 621 70 33 1 580 55373520 55374119 6.190000e-95 359.0
30 TraesCS4A01G396400 chr7D 85.886 333 42 3 249 578 55249450 55249780 3.720000e-92 350.0
31 TraesCS4A01G396400 chr7D 89.105 257 12 3 3754 3994 459742872 459743128 8.180000e-79 305.0
32 TraesCS4A01G396400 chr7D 88.261 230 13 6 1174 1401 55267471 55267688 4.990000e-66 263.0
33 TraesCS4A01G396400 chr7D 92.308 130 10 0 1425 1554 55375063 55375192 1.110000e-42 185.0
34 TraesCS4A01G396400 chr7D 85.714 119 14 3 5717 5833 55324952 55325069 8.840000e-24 122.0
35 TraesCS4A01G396400 chr7D 78.866 194 21 8 4265 4441 55269466 55269656 5.320000e-21 113.0
36 TraesCS4A01G396400 chr7D 96.825 63 2 0 1425 1487 55267765 55267827 8.900000e-19 106.0
37 TraesCS4A01G396400 chr7D 98.305 59 1 0 1430 1488 55250692 55250750 3.200000e-18 104.0
38 TraesCS4A01G396400 chr7D 94.000 50 3 0 4210 4259 55390342 55390391 6.980000e-10 76.8
39 TraesCS4A01G396400 chr7A 90.279 1183 88 12 4429 5588 59352487 59353665 0.000000e+00 1522.0
40 TraesCS4A01G396400 chr7A 88.699 1053 69 24 1425 2471 59349707 59350715 0.000000e+00 1240.0
41 TraesCS4A01G396400 chr7A 82.998 1241 168 25 4427 5637 59232076 59233303 0.000000e+00 1083.0
42 TraesCS4A01G396400 chr7A 88.392 827 47 18 610 1396 59348812 59349629 0.000000e+00 950.0
43 TraesCS4A01G396400 chr7A 85.486 875 95 21 1602 2457 59202427 59203288 0.000000e+00 883.0
44 TraesCS4A01G396400 chr7A 87.990 766 56 15 5760 6491 59353819 59354582 0.000000e+00 872.0
45 TraesCS4A01G396400 chr7A 80.497 1287 113 69 162 1403 59201079 59202272 0.000000e+00 859.0
46 TraesCS4A01G396400 chr7A 84.713 870 114 14 4251 5108 59292857 59293719 0.000000e+00 852.0
47 TraesCS4A01G396400 chr7A 83.049 879 106 27 1594 2456 59288307 59289158 0.000000e+00 758.0
48 TraesCS4A01G396400 chr7A 83.353 847 70 45 612 1403 59287276 59288106 0.000000e+00 717.0
49 TraesCS4A01G396400 chr7A 84.143 700 81 15 1768 2458 59229627 59230305 0.000000e+00 651.0
50 TraesCS4A01G396400 chr7A 84.867 641 33 24 1 585 59348126 59348758 7.250000e-164 588.0
51 TraesCS4A01G396400 chr7A 90.704 355 24 6 2773 3126 59350737 59351083 1.270000e-126 464.0
52 TraesCS4A01G396400 chr7A 79.100 622 62 34 1 580 59286619 59287214 3.700000e-97 366.0
53 TraesCS4A01G396400 chr7A 78.155 618 76 33 2 580 59227749 59228346 8.060000e-89 339.0
54 TraesCS4A01G396400 chr7A 93.133 233 9 4 1172 1403 59229024 59229250 1.040000e-87 335.0
55 TraesCS4A01G396400 chr7A 89.883 257 19 5 2786 3036 59289232 59289487 2.260000e-84 324.0
56 TraesCS4A01G396400 chr7A 85.762 302 22 9 3315 3596 59351293 59351593 3.800000e-77 300.0
57 TraesCS4A01G396400 chr7A 83.125 320 20 17 1423 1720 59229319 59229626 1.800000e-65 261.0
58 TraesCS4A01G396400 chr7A 85.950 242 29 3 3755 3994 701196584 701196822 3.000000e-63 254.0
59 TraesCS4A01G396400 chr7A 92.899 169 9 1 4095 4260 59352148 59352316 6.500000e-60 243.0
60 TraesCS4A01G396400 chr7A 86.957 184 17 5 2779 2956 59230354 59230536 3.970000e-47 200.0
61 TraesCS4A01G396400 chr7A 93.939 132 8 0 1423 1554 59288175 59288306 3.970000e-47 200.0
62 TraesCS4A01G396400 chr7A 88.356 146 14 3 2798 2941 59203421 59203565 8.650000e-39 172.0
63 TraesCS4A01G396400 chr7A 78.500 200 30 12 5637 5833 59218164 59218353 1.140000e-22 119.0
64 TraesCS4A01G396400 chr7A 79.333 150 19 3 4251 4391 59204036 59204182 1.930000e-15 95.3
65 TraesCS4A01G396400 chr7A 97.561 41 1 0 4363 4403 59352438 59352478 3.250000e-08 71.3
66 TraesCS4A01G396400 chr7A 87.755 49 4 2 3214 3261 339886245 339886198 1.000000e-03 56.5
67 TraesCS4A01G396400 chr3D 91.321 265 22 1 2468 2732 346865212 346865475 1.720000e-95 361.0
68 TraesCS4A01G396400 chr3D 90.909 264 22 2 2469 2732 461592289 461592028 2.880000e-93 353.0
69 TraesCS4A01G396400 chr5A 91.288 264 22 1 2469 2732 631470293 631470031 6.190000e-95 359.0
70 TraesCS4A01G396400 chr1D 90.226 266 21 5 2469 2732 413416515 413416253 6.230000e-90 342.0
71 TraesCS4A01G396400 chr1D 89.811 265 25 2 2468 2732 377023046 377022784 8.060000e-89 339.0
72 TraesCS4A01G396400 chr4D 90.076 262 25 1 2469 2730 122202102 122202362 8.060000e-89 339.0
73 TraesCS4A01G396400 chr4D 89.513 267 27 1 2466 2732 16920419 16920684 2.900000e-88 337.0
74 TraesCS4A01G396400 chr4D 89.513 267 22 6 2468 2732 336841750 336842012 3.750000e-87 333.0
75 TraesCS4A01G396400 chr4D 88.933 253 15 2 3755 3994 475434880 475434628 3.800000e-77 300.0
76 TraesCS4A01G396400 chr4D 88.538 253 16 2 3755 3994 475398451 475398199 1.770000e-75 294.0
77 TraesCS4A01G396400 chr4D 88.048 251 15 5 3755 3990 363017375 363017125 3.830000e-72 283.0
78 TraesCS4A01G396400 chrUn 89.139 267 27 2 2468 2734 83299853 83300117 1.350000e-86 331.0
79 TraesCS4A01G396400 chr5B 89.147 258 13 3 3752 3994 27825303 27825046 2.270000e-79 307.0
80 TraesCS4A01G396400 chr5B 92.308 39 1 2 3224 3261 501964412 501964375 3.000000e-03 54.7
81 TraesCS4A01G396400 chr7B 93.299 194 11 2 3803 3994 164074525 164074332 1.070000e-72 285.0
82 TraesCS4A01G396400 chr7B 85.328 259 23 7 3743 3986 498256802 498256544 3.000000e-63 254.0
83 TraesCS4A01G396400 chr6D 88.618 246 13 7 3755 3985 193712315 193712070 1.070000e-72 285.0
84 TraesCS4A01G396400 chr6D 87.747 253 17 2 3756 3994 111470039 111470291 3.830000e-72 283.0
85 TraesCS4A01G396400 chr3B 86.667 255 19 6 3755 3994 811005626 811005372 1.070000e-67 268.0
86 TraesCS4A01G396400 chr3B 97.368 38 1 0 3226 3263 752000082 752000119 1.510000e-06 65.8
87 TraesCS4A01G396400 chr6A 86.585 246 26 4 3752 3994 6336390 6336631 1.390000e-66 265.0
88 TraesCS4A01G396400 chr6A 100.000 28 0 0 3224 3251 607045726 607045753 1.200000e-02 52.8
89 TraesCS4A01G396400 chr2B 83.137 255 28 9 3754 3994 632643851 632643598 1.100000e-52 219.0
90 TraesCS4A01G396400 chr2B 95.000 40 2 0 3224 3263 286862422 286862461 5.430000e-06 63.9
91 TraesCS4A01G396400 chr1A 94.872 39 0 2 3224 3261 8040606 8040643 7.030000e-05 60.2
92 TraesCS4A01G396400 chr4B 96.875 32 1 0 3230 3261 11658640 11658609 3.000000e-03 54.7
93 TraesCS4A01G396400 chr4B 94.286 35 0 2 3224 3257 173715299 173715266 1.200000e-02 52.8
94 TraesCS4A01G396400 chr3A 90.476 42 2 2 3221 3261 703961910 703961950 3.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G396400 chr4A 671638219 671644709 6490 False 11987.000000 11987 100.000000 1 6491 1 chr4A.!!$F2 6490
1 TraesCS4A01G396400 chr4A 671596667 671602459 5792 False 628.750000 1179 82.160000 610 5607 4 chr4A.!!$F4 4997
2 TraesCS4A01G396400 chr4A 671522562 671527341 4779 False 457.333333 898 86.675500 267 5637 6 chr4A.!!$F3 5370
3 TraesCS4A01G396400 chr7D 55386490 55392820 6330 False 941.685714 1648 89.324143 1 6488 7 chr7D.!!$F6 6487
4 TraesCS4A01G396400 chr7D 55373520 55379211 5691 False 611.500000 1173 85.958667 1 5561 6 chr7D.!!$F5 5560
5 TraesCS4A01G396400 chr7D 55249450 55253899 4449 False 512.800000 904 85.374200 249 5637 5 chr7D.!!$F3 5388
6 TraesCS4A01G396400 chr7D 55266219 55270981 4762 False 500.666667 909 84.988000 1 5637 6 chr7D.!!$F4 5636
7 TraesCS4A01G396400 chr7A 59348126 59354582 6456 False 694.477778 1522 89.683667 1 6491 9 chr7A.!!$F6 6490
8 TraesCS4A01G396400 chr7A 59286619 59293719 7100 False 536.166667 852 85.672833 1 5108 6 chr7A.!!$F5 5107
9 TraesCS4A01G396400 chr7A 59201079 59204182 3103 False 502.325000 883 83.418000 162 4391 4 chr7A.!!$F3 4229
10 TraesCS4A01G396400 chr7A 59227749 59233303 5554 False 478.166667 1083 84.751833 2 5637 6 chr7A.!!$F4 5635

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
849 1045 1.131638 CCAGGCCATGGTCTAGCTTA 58.868 55.0 20.89 0.0 44.91 3.09 F
2479 3663 0.316204 CAACAACGTACTCCCTCCGT 59.684 55.0 0.00 0.0 36.17 4.69 F
4407 10367 0.247854 GCGCTCGGCTTTCTTCAATC 60.248 55.0 0.00 0.0 39.11 2.67 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2707 3891 0.099968 TCTCCGTCCGCGAATAAGTG 59.900 55.0 8.23 0.0 41.33 3.16 R
4477 10579 0.107312 CATCTCTGCACCTGGGGAAG 60.107 60.0 0.00 0.0 0.00 3.46 R
6205 12416 0.038251 TCAAGTGCTAGTGCTGTCCG 60.038 55.0 0.00 0.0 40.48 4.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
124 156 5.630264 CAGTTCTTGATGATAGATCTCGCTG 59.370 44.000 0.00 0.00 0.00 5.18
205 272 6.867519 TCTTACCATTCTGACTCCATACAA 57.132 37.500 0.00 0.00 0.00 2.41
247 328 8.954350 ACTGTACTTACATAACTACAGTACTGG 58.046 37.037 26.12 12.24 40.61 4.00
265 349 1.370587 GGCAAGTACGCCGCCAAATA 61.371 55.000 15.68 0.00 45.52 1.40
308 392 4.226168 AGGAAATTCTGACTTAGACTGGGG 59.774 45.833 0.00 0.00 34.43 4.96
365 449 5.759763 TCACCAAATCTCATTACATGGATCG 59.240 40.000 0.00 0.00 0.00 3.69
386 482 5.473039 TCGAAGACATATATGCATGAGTGG 58.527 41.667 10.16 0.00 0.00 4.00
408 507 5.485353 TGGTTATGACTGAACTTCCTCTGAT 59.515 40.000 0.00 0.00 0.00 2.90
494 595 3.759086 CGCTCTATAATAGTGGGCTGAGA 59.241 47.826 0.00 0.00 0.00 3.27
522 629 4.517703 GCCGACGACGACGAGGAG 62.518 72.222 20.63 5.41 42.66 3.69
585 699 2.912967 CGACGTATGTAACACACAGTCC 59.087 50.000 0.00 0.00 41.51 3.85
586 700 3.609879 CGACGTATGTAACACACAGTCCA 60.610 47.826 0.00 0.00 41.51 4.02
587 701 3.909430 ACGTATGTAACACACAGTCCAG 58.091 45.455 0.00 0.00 41.51 3.86
588 702 3.570975 ACGTATGTAACACACAGTCCAGA 59.429 43.478 0.00 0.00 41.51 3.86
589 703 3.918591 CGTATGTAACACACAGTCCAGAC 59.081 47.826 0.00 0.00 41.51 3.51
614 766 3.765349 ACGCGCGTCATTTTTGAAT 57.235 42.105 32.73 1.54 0.00 2.57
646 803 4.169508 CACACGTAAATCTGAGTCTCCTG 58.830 47.826 0.00 0.00 0.00 3.86
725 909 3.550842 GGCTGTGGTTTGACATTTCTGAC 60.551 47.826 0.00 0.00 0.00 3.51
728 912 4.133820 TGTGGTTTGACATTTCTGACGAT 58.866 39.130 0.00 0.00 0.00 3.73
745 933 1.506493 GATGCTGACCGCCTAATCAG 58.494 55.000 0.00 0.00 44.37 2.90
848 1044 1.918253 CCAGGCCATGGTCTAGCTT 59.082 57.895 20.89 0.00 44.91 3.74
849 1045 1.131638 CCAGGCCATGGTCTAGCTTA 58.868 55.000 20.89 0.00 44.91 3.09
851 1047 1.765314 CAGGCCATGGTCTAGCTTAGT 59.235 52.381 20.89 0.00 0.00 2.24
853 1049 3.006323 CAGGCCATGGTCTAGCTTAGTAG 59.994 52.174 20.89 0.00 0.00 2.57
952 1238 2.559231 GAGAGAGGAGAAGGACGTTTGT 59.441 50.000 0.00 0.00 0.00 2.83
1030 1319 3.557903 GACCAGAGGCAGCTTGGCA 62.558 63.158 11.23 0.00 46.46 4.92
1085 1378 6.430000 TGGGACTGTTTAATTACTTCTCTTGC 59.570 38.462 0.00 0.00 0.00 4.01
1129 1434 4.423732 TGCTTCAAAGAGTTCTTTTGTGC 58.576 39.130 4.43 9.09 43.07 4.57
1130 1435 4.158394 TGCTTCAAAGAGTTCTTTTGTGCT 59.842 37.500 4.43 0.00 43.07 4.40
1137 1444 3.629398 AGAGTTCTTTTGTGCTTGAGTGG 59.371 43.478 0.00 0.00 0.00 4.00
1187 1661 2.054799 AGTGGTTAGGACTTGGCTGAA 58.945 47.619 0.00 0.00 0.00 3.02
1210 1690 2.106566 TCTCTCTTCTCTGGGATGTGC 58.893 52.381 0.00 0.00 0.00 4.57
1271 1778 7.614124 TCTGATCGATGTCAAAATCAATCAA 57.386 32.000 0.54 0.00 31.33 2.57
1272 1779 7.691158 TCTGATCGATGTCAAAATCAATCAAG 58.309 34.615 0.54 0.00 31.33 3.02
1353 1879 4.415179 TGTGGATAAGCCCAGAAATGGATA 59.585 41.667 0.00 0.00 36.78 2.59
1396 1923 7.546358 TGTCATCCAATAAATTCATGGTGTTC 58.454 34.615 0.00 3.27 35.66 3.18
1512 2155 7.329717 TCAAACAGGTTCAACAAACATAAACAC 59.670 33.333 0.00 0.00 39.81 3.32
1514 2157 4.737765 CAGGTTCAACAAACATAAACACCG 59.262 41.667 0.00 0.00 39.81 4.94
1562 2213 3.258622 GGCAGGGTCTGGTACTACATATC 59.741 52.174 0.00 0.00 31.21 1.63
1612 2278 9.419297 CAGAAGCGGCAGTAAAAACTATATATA 57.581 33.333 1.45 0.00 0.00 0.86
1616 2282 8.373220 AGCGGCAGTAAAAACTATATATAACCT 58.627 33.333 1.45 0.00 0.00 3.50
1661 2328 9.762933 CCTGAAATTTTCCTCAACTAATTCAAA 57.237 29.630 6.68 0.00 0.00 2.69
1748 2428 6.292923 TGCAAAACTAGTTAGCTCCAAGTAA 58.707 36.000 24.68 7.52 0.00 2.24
1759 2910 9.113838 AGTTAGCTCCAAGTAATCAAATACATG 57.886 33.333 0.00 0.00 0.00 3.21
1784 2937 2.107552 ACCAAGCCAAGTAGCCAACTAA 59.892 45.455 0.00 0.00 37.50 2.24
1812 2968 5.779529 ATCATATGTGATTTGCTTCACCC 57.220 39.130 1.90 0.00 42.37 4.61
1846 3007 5.909621 ACTAATAACAGGTCTCGCTGTTA 57.090 39.130 13.43 13.43 46.01 2.41
1951 3112 2.027745 AGGCTGAAGACGATGTTGTCAT 60.028 45.455 3.40 0.00 41.41 3.06
1996 3157 3.499918 CCTTCAGAAGCAGTTCGATGTTT 59.500 43.478 4.41 0.00 37.79 2.83
2056 3217 4.758251 CGGAGCACACATCGCCCA 62.758 66.667 0.00 0.00 0.00 5.36
2092 3253 3.134458 GACCCCAGATTCTTCGCATTAG 58.866 50.000 0.00 0.00 0.00 1.73
2134 3298 2.358003 GCACGAGCAGGCAGAACT 60.358 61.111 0.00 0.00 41.58 3.01
2479 3663 0.316204 CAACAACGTACTCCCTCCGT 59.684 55.000 0.00 0.00 36.17 4.69
2482 3666 2.042831 AACGTACTCCCTCCGTCCG 61.043 63.158 0.00 0.00 32.95 4.79
2484 3668 2.758089 CGTACTCCCTCCGTCCGTG 61.758 68.421 0.00 0.00 0.00 4.94
2486 3670 0.962356 GTACTCCCTCCGTCCGTGAA 60.962 60.000 0.00 0.00 0.00 3.18
2489 3673 1.108776 CTCCCTCCGTCCGTGAATAA 58.891 55.000 0.00 0.00 0.00 1.40
2490 3674 1.067212 CTCCCTCCGTCCGTGAATAAG 59.933 57.143 0.00 0.00 0.00 1.73
2491 3675 0.822164 CCCTCCGTCCGTGAATAAGT 59.178 55.000 0.00 0.00 0.00 2.24
2492 3676 2.026641 CCCTCCGTCCGTGAATAAGTA 58.973 52.381 0.00 0.00 0.00 2.24
2493 3677 2.626743 CCCTCCGTCCGTGAATAAGTAT 59.373 50.000 0.00 0.00 0.00 2.12
2497 3681 5.009410 CCTCCGTCCGTGAATAAGTATACTT 59.991 44.000 21.35 21.35 39.85 2.24
2498 3682 6.064846 TCCGTCCGTGAATAAGTATACTTC 57.935 41.667 21.25 8.63 37.40 3.01
2499 3683 5.824624 TCCGTCCGTGAATAAGTATACTTCT 59.175 40.000 21.25 9.50 37.40 2.85
2501 3685 7.041780 TCCGTCCGTGAATAAGTATACTTCTAC 60.042 40.741 21.25 14.09 37.40 2.59
2502 3686 7.074502 CGTCCGTGAATAAGTATACTTCTACC 58.925 42.308 21.25 10.04 37.40 3.18
2506 3690 9.813446 CCGTGAATAAGTATACTTCTACCTTTT 57.187 33.333 21.25 5.77 37.40 2.27
2521 3705 9.110502 CTTCTACCTTTTGTCTTAAGTCAAAGT 57.889 33.333 21.47 19.33 35.29 2.66
2522 3706 9.457436 TTCTACCTTTTGTCTTAAGTCAAAGTT 57.543 29.630 21.47 14.65 35.29 2.66
2579 3763 7.741027 AGTAGCATATCTGACATCAAATTGG 57.259 36.000 0.00 0.00 0.00 3.16
2580 3764 7.285566 AGTAGCATATCTGACATCAAATTGGT 58.714 34.615 0.00 0.00 0.00 3.67
2581 3765 8.432013 AGTAGCATATCTGACATCAAATTGGTA 58.568 33.333 0.00 0.00 0.00 3.25
2616 3800 8.827177 AGTACATTTCGAAACAAATCTAGTGA 57.173 30.769 13.81 0.00 0.00 3.41
2617 3801 9.436957 AGTACATTTCGAAACAAATCTAGTGAT 57.563 29.630 13.81 0.00 33.70 3.06
2639 3823 9.612620 GTGATACTAATTTAGTGCCATAAATGC 57.387 33.333 17.47 1.68 39.81 3.56
2642 3826 6.507023 ACTAATTTAGTGCCATAAATGCTGC 58.493 36.000 8.27 0.00 37.69 5.25
2643 3827 5.603170 AATTTAGTGCCATAAATGCTGCT 57.397 34.783 0.00 0.00 35.91 4.24
2718 3902 5.961395 ACCTAAATGTACACTTATTCGCG 57.039 39.130 0.00 0.00 0.00 5.87
2719 3903 4.807304 ACCTAAATGTACACTTATTCGCGG 59.193 41.667 6.13 0.00 0.00 6.46
2720 3904 5.045215 CCTAAATGTACACTTATTCGCGGA 58.955 41.667 6.13 0.00 0.00 5.54
2721 3905 4.852609 AAATGTACACTTATTCGCGGAC 57.147 40.909 6.13 0.00 0.00 4.79
2722 3906 1.898938 TGTACACTTATTCGCGGACG 58.101 50.000 6.13 0.00 42.01 4.79
2724 3908 1.093972 TACACTTATTCGCGGACGGA 58.906 50.000 6.13 0.00 40.63 4.69
2727 3911 0.381089 ACTTATTCGCGGACGGAGAG 59.619 55.000 6.13 0.00 40.63 3.20
2728 3912 0.661552 CTTATTCGCGGACGGAGAGA 59.338 55.000 6.13 0.00 40.63 3.10
2742 3936 2.095161 CGGAGAGAGTACACAAGTGACC 60.095 54.545 7.28 0.00 0.00 4.02
2747 3941 4.279671 AGAGAGTACACAAGTGACCAGAAG 59.720 45.833 7.28 0.00 0.00 2.85
2755 3949 7.440523 ACACAAGTGACCAGAAGATTAAATC 57.559 36.000 7.28 0.00 0.00 2.17
2757 3951 8.375506 ACACAAGTGACCAGAAGATTAAATCTA 58.624 33.333 7.28 0.00 39.08 1.98
2759 3953 9.965902 ACAAGTGACCAGAAGATTAAATCTAAT 57.034 29.630 0.00 0.00 39.08 1.73
2851 4115 0.912486 GGTGCCAGTGGAGGAAGTAT 59.088 55.000 15.20 0.00 0.00 2.12
2866 4130 4.221703 AGGAAGTATGGGCAGAAGATATCG 59.778 45.833 0.00 0.00 0.00 2.92
3000 4291 3.788227 TGGTACCAAAGAATCTGCTGT 57.212 42.857 13.60 0.00 0.00 4.40
3048 4510 8.248253 ACATGACGAAGAACTATACATGTGTTA 58.752 33.333 9.11 0.00 42.90 2.41
3120 4710 2.324860 TCGCACACTACTTGATCGTTG 58.675 47.619 0.00 0.00 0.00 4.10
3122 4712 2.729360 CGCACACTACTTGATCGTTGAA 59.271 45.455 0.00 0.00 0.00 2.69
3123 4713 3.181540 CGCACACTACTTGATCGTTGAAG 60.182 47.826 0.00 0.00 0.00 3.02
3124 4714 3.987868 GCACACTACTTGATCGTTGAAGA 59.012 43.478 0.00 0.00 0.00 2.87
3126 4716 5.388890 GCACACTACTTGATCGTTGAAGAAG 60.389 44.000 0.00 0.00 0.00 2.85
3127 4717 5.920840 CACACTACTTGATCGTTGAAGAAGA 59.079 40.000 0.00 0.00 0.00 2.87
3131 4721 8.335356 CACTACTTGATCGTTGAAGAAGAAAAA 58.665 33.333 0.00 0.00 0.00 1.94
3203 4917 9.413048 GTGCATTATACAGTTCCTATTAGAGAC 57.587 37.037 0.00 0.00 0.00 3.36
3214 5250 9.268282 AGTTCCTATTAGAGACTCCATAACAAA 57.732 33.333 0.00 0.00 0.00 2.83
3228 5264 7.610305 ACTCCATAACAAATATTTTCACCGTCT 59.390 33.333 0.00 0.00 0.00 4.18
3242 5278 5.209818 TCACCGTCTCAAAATAAGTGTCT 57.790 39.130 0.00 0.00 0.00 3.41
3246 5282 6.147821 CACCGTCTCAAAATAAGTGTCTCAAT 59.852 38.462 0.00 0.00 0.00 2.57
3247 5283 6.710744 ACCGTCTCAAAATAAGTGTCTCAATT 59.289 34.615 0.00 0.00 0.00 2.32
3276 5312 9.748708 AATATAATTTTGTGTACATGCATGGTC 57.251 29.630 29.41 20.82 0.00 4.02
3277 5313 3.932545 TTTTGTGTACATGCATGGTCC 57.067 42.857 29.41 16.78 0.00 4.46
3278 5314 1.832883 TTGTGTACATGCATGGTCCC 58.167 50.000 29.41 15.11 0.00 4.46
3279 5315 0.695347 TGTGTACATGCATGGTCCCA 59.305 50.000 29.41 17.34 0.00 4.37
3280 5316 1.074566 TGTGTACATGCATGGTCCCAA 59.925 47.619 29.41 8.69 0.00 4.12
3281 5317 2.166829 GTGTACATGCATGGTCCCAAA 58.833 47.619 29.41 6.07 0.00 3.28
3285 5390 0.386476 CATGCATGGTCCCAAATCCG 59.614 55.000 19.40 0.00 0.00 4.18
3296 5401 1.674322 CAAATCCGGCGACCAACCT 60.674 57.895 9.30 0.00 0.00 3.50
3396 5507 2.050918 GGAGGGAACTAGGGGATCAAG 58.949 57.143 0.00 0.00 44.43 3.02
3425 5549 2.831742 CGGGGATCGGACTCGGAA 60.832 66.667 0.00 0.00 36.95 4.30
3579 5938 0.678048 CTGCTGGGGTTTAGGCTGAC 60.678 60.000 0.00 0.00 0.00 3.51
3657 6146 1.229177 GATGGGCTTTGGGTTGGGT 60.229 57.895 0.00 0.00 0.00 4.51
3665 6154 2.969300 TTTGGGTTGGGTCAGCGTCC 62.969 60.000 0.00 0.00 0.00 4.79
3695 6199 1.518903 GCTGTCTGCCCACTTGAACC 61.519 60.000 0.00 0.00 35.15 3.62
3701 6205 0.324738 TGCCCACTTGAACCACCAAA 60.325 50.000 0.00 0.00 0.00 3.28
3766 6411 2.629017 TACCTTTTACTCCCTCCGGT 57.371 50.000 0.00 0.00 0.00 5.28
3767 6412 1.738474 ACCTTTTACTCCCTCCGGTT 58.262 50.000 0.00 0.00 0.00 4.44
3768 6413 1.627329 ACCTTTTACTCCCTCCGGTTC 59.373 52.381 0.00 0.00 0.00 3.62
3770 6415 2.305052 CCTTTTACTCCCTCCGGTTCTT 59.695 50.000 0.00 0.00 0.00 2.52
3771 6416 3.244805 CCTTTTACTCCCTCCGGTTCTTT 60.245 47.826 0.00 0.00 0.00 2.52
3774 6419 5.565455 TTTACTCCCTCCGGTTCTTTTTA 57.435 39.130 0.00 0.00 0.00 1.52
3776 6421 2.977580 ACTCCCTCCGGTTCTTTTTACT 59.022 45.455 0.00 0.00 0.00 2.24
3777 6422 3.007723 ACTCCCTCCGGTTCTTTTTACTC 59.992 47.826 0.00 0.00 0.00 2.59
3780 6425 2.742589 CCTCCGGTTCTTTTTACTCTGC 59.257 50.000 0.00 0.00 0.00 4.26
3782 6427 4.003648 CTCCGGTTCTTTTTACTCTGCAT 58.996 43.478 0.00 0.00 0.00 3.96
3785 6430 6.880484 TCCGGTTCTTTTTACTCTGCATATA 58.120 36.000 0.00 0.00 0.00 0.86
3786 6431 7.332557 TCCGGTTCTTTTTACTCTGCATATAA 58.667 34.615 0.00 0.00 0.00 0.98
3787 6432 7.494625 TCCGGTTCTTTTTACTCTGCATATAAG 59.505 37.037 0.00 0.00 0.00 1.73
3788 6433 7.494625 CCGGTTCTTTTTACTCTGCATATAAGA 59.505 37.037 0.00 0.00 0.00 2.10
3789 6434 8.879759 CGGTTCTTTTTACTCTGCATATAAGAA 58.120 33.333 0.00 0.00 0.00 2.52
3801 6446 8.654230 TCTGCATATAAGAATTGTCTGAAGTC 57.346 34.615 0.00 0.00 33.05 3.01
3803 6448 9.107177 CTGCATATAAGAATTGTCTGAAGTCTT 57.893 33.333 0.00 0.00 38.08 3.01
3805 6450 9.713740 GCATATAAGAATTGTCTGAAGTCTTTG 57.286 33.333 2.82 0.00 36.24 2.77
3809 6454 9.730705 ATAAGAATTGTCTGAAGTCTTTGATCA 57.269 29.630 2.82 0.00 36.24 2.92
3843 6488 8.158169 TGAGAAAATATCAACATCTACCATGC 57.842 34.615 0.00 0.00 0.00 4.06
3845 6490 8.523915 AGAAAATATCAACATCTACCATGCAA 57.476 30.769 0.00 0.00 0.00 4.08
3846 6491 8.970020 AGAAAATATCAACATCTACCATGCAAA 58.030 29.630 0.00 0.00 0.00 3.68
3848 6493 9.590451 AAAATATCAACATCTACCATGCAAAAG 57.410 29.630 0.00 0.00 0.00 2.27
3851 6496 7.701539 ATCAACATCTACCATGCAAAAGTTA 57.298 32.000 0.00 0.00 0.00 2.24
3852 6497 7.701539 TCAACATCTACCATGCAAAAGTTAT 57.298 32.000 0.00 0.00 0.00 1.89
3853 6498 8.800370 TCAACATCTACCATGCAAAAGTTATA 57.200 30.769 0.00 0.00 0.00 0.98
3854 6499 8.673711 TCAACATCTACCATGCAAAAGTTATAC 58.326 33.333 0.00 0.00 0.00 1.47
3856 6501 8.574251 ACATCTACCATGCAAAAGTTATACAA 57.426 30.769 0.00 0.00 0.00 2.41
3857 6502 9.189156 ACATCTACCATGCAAAAGTTATACAAT 57.811 29.630 0.00 0.00 0.00 2.71
3951 6596 5.729974 GTTGGTCAAACTTTACGAGACTT 57.270 39.130 0.00 0.00 35.75 3.01
3952 6597 5.499047 GTTGGTCAAACTTTACGAGACTTG 58.501 41.667 0.00 0.00 35.75 3.16
3953 6598 5.013568 TGGTCAAACTTTACGAGACTTGA 57.986 39.130 0.00 0.00 32.31 3.02
3954 6599 4.807304 TGGTCAAACTTTACGAGACTTGAC 59.193 41.667 0.00 12.80 43.34 3.18
3955 6600 4.807304 GGTCAAACTTTACGAGACTTGACA 59.193 41.667 18.21 0.00 44.44 3.58
3956 6601 5.465724 GGTCAAACTTTACGAGACTTGACAT 59.534 40.000 18.21 0.00 44.44 3.06
3957 6602 6.018180 GGTCAAACTTTACGAGACTTGACATT 60.018 38.462 18.21 0.00 44.44 2.71
3958 6603 7.170320 GGTCAAACTTTACGAGACTTGACATTA 59.830 37.037 18.21 0.00 44.44 1.90
3959 6604 8.215132 GTCAAACTTTACGAGACTTGACATTAG 58.785 37.037 14.72 0.00 43.43 1.73
3960 6605 8.139350 TCAAACTTTACGAGACTTGACATTAGA 58.861 33.333 0.00 0.00 30.89 2.10
3961 6606 7.870588 AACTTTACGAGACTTGACATTAGAC 57.129 36.000 0.00 0.00 0.00 2.59
3962 6607 6.978338 ACTTTACGAGACTTGACATTAGACA 58.022 36.000 0.00 0.00 0.00 3.41
3963 6608 7.431249 ACTTTACGAGACTTGACATTAGACAA 58.569 34.615 0.00 0.00 0.00 3.18
3964 6609 7.924412 ACTTTACGAGACTTGACATTAGACAAA 59.076 33.333 0.00 0.00 0.00 2.83
3965 6610 8.827177 TTTACGAGACTTGACATTAGACAAAT 57.173 30.769 0.00 0.00 0.00 2.32
3966 6611 6.952935 ACGAGACTTGACATTAGACAAATC 57.047 37.500 0.00 0.00 0.00 2.17
3967 6612 6.692486 ACGAGACTTGACATTAGACAAATCT 58.308 36.000 0.00 0.00 38.35 2.40
3968 6613 7.155328 ACGAGACTTGACATTAGACAAATCTT 58.845 34.615 0.00 0.00 36.45 2.40
3969 6614 8.304596 ACGAGACTTGACATTAGACAAATCTTA 58.695 33.333 0.00 0.00 36.45 2.10
3970 6615 9.307121 CGAGACTTGACATTAGACAAATCTTAT 57.693 33.333 0.00 0.00 36.45 1.73
3975 6620 9.803130 CTTGACATTAGACAAATCTTATATGCG 57.197 33.333 0.00 0.00 36.29 4.73
3976 6621 9.541143 TTGACATTAGACAAATCTTATATGCGA 57.459 29.630 0.00 0.00 36.29 5.10
3977 6622 9.541143 TGACATTAGACAAATCTTATATGCGAA 57.459 29.630 0.00 0.00 36.29 4.70
3978 6623 9.798885 GACATTAGACAAATCTTATATGCGAAC 57.201 33.333 0.00 0.00 36.29 3.95
3979 6624 9.547753 ACATTAGACAAATCTTATATGCGAACT 57.452 29.630 0.00 0.00 36.29 3.01
3989 6634 7.781548 TCTTATATGCGAACTAAAAAGGACC 57.218 36.000 0.00 0.00 0.00 4.46
3990 6635 7.332557 TCTTATATGCGAACTAAAAAGGACCA 58.667 34.615 0.00 0.00 0.00 4.02
3991 6636 7.494625 TCTTATATGCGAACTAAAAAGGACCAG 59.505 37.037 0.00 0.00 0.00 4.00
3992 6637 3.478857 TGCGAACTAAAAAGGACCAGA 57.521 42.857 0.00 0.00 0.00 3.86
3993 6638 3.399330 TGCGAACTAAAAAGGACCAGAG 58.601 45.455 0.00 0.00 0.00 3.35
4032 6680 4.463539 TGCAAGCATTACATGTCTTTCCAT 59.536 37.500 0.00 0.00 0.00 3.41
4033 6681 5.651576 TGCAAGCATTACATGTCTTTCCATA 59.348 36.000 0.00 0.00 0.00 2.74
4034 6682 6.321945 TGCAAGCATTACATGTCTTTCCATAT 59.678 34.615 0.00 0.00 0.00 1.78
4087 6739 6.706746 TCGATTCATATTCGAGTATCTAGCG 58.293 40.000 0.00 4.22 40.44 4.26
4131 6962 0.384309 GGCTGTCGTATGACCGATGA 59.616 55.000 12.54 0.00 44.86 2.92
4281 9116 1.128507 CGTGTGCACATATGTTCGCTT 59.871 47.619 24.69 0.00 0.00 4.68
4407 10367 0.247854 GCGCTCGGCTTTCTTCAATC 60.248 55.000 0.00 0.00 39.11 2.67
4464 10566 0.984230 ATGGTGACCGACTGACCATT 59.016 50.000 0.00 0.00 46.30 3.16
4473 10575 3.005684 ACCGACTGACCATTAACGTACAA 59.994 43.478 0.00 0.00 0.00 2.41
4477 10579 6.238508 CGACTGACCATTAACGTACAATTTC 58.761 40.000 0.00 0.00 0.00 2.17
4711 10822 4.704103 ACGCCTCCTCCAGCCAGA 62.704 66.667 0.00 0.00 0.00 3.86
4865 10976 1.066286 CAGGTTCTCCTCCAGCTTCAG 60.066 57.143 0.00 0.00 43.07 3.02
4866 10977 0.980423 GGTTCTCCTCCAGCTTCAGT 59.020 55.000 0.00 0.00 0.00 3.41
4870 10981 2.435586 CCTCCAGCTTCAGTGGCG 60.436 66.667 0.00 0.00 34.77 5.69
4872 10983 4.704833 TCCAGCTTCAGTGGCGCC 62.705 66.667 22.73 22.73 34.77 6.53
4955 11069 4.603535 AAGCAACCTGCCCGGCTT 62.604 61.111 11.61 0.00 46.52 4.35
4987 11101 1.522806 GCCGGCGTTGGATCATACA 60.523 57.895 12.58 0.00 0.00 2.29
5001 11115 3.831715 TCATACATGAGCTACGGATCG 57.168 47.619 0.00 0.00 32.11 3.69
5048 11162 1.213013 GCAAGAGCTCGTTCGAGGA 59.787 57.895 20.97 0.00 37.91 3.71
5393 11549 1.959226 GTTCTCCGCACGGCAAGAA 60.959 57.895 3.66 6.66 34.68 2.52
5395 11551 2.048222 CTCCGCACGGCAAGAAGA 60.048 61.111 3.66 0.00 34.68 2.87
5398 11554 2.099062 CGCACGGCAAGAAGATGC 59.901 61.111 0.00 0.00 45.67 3.91
5436 11595 4.459089 GCACTCTCGGGCTCCACC 62.459 72.222 0.00 0.00 37.93 4.61
5437 11596 2.997315 CACTCTCGGGCTCCACCA 60.997 66.667 0.00 0.00 42.05 4.17
5438 11597 2.997897 ACTCTCGGGCTCCACCAC 60.998 66.667 0.00 0.00 42.05 4.16
5458 11617 0.674895 CAGTGCTACTGCTTCCACCC 60.675 60.000 3.83 0.00 39.62 4.61
5501 11666 6.936279 AGCACACTAATTAGTTAGCTGAAGA 58.064 36.000 27.98 0.00 40.33 2.87
5504 11670 8.119226 GCACACTAATTAGTTAGCTGAAGATTG 58.881 37.037 22.65 9.42 40.82 2.67
5627 11801 1.946745 ACGCCCATTTTTGTGTTTGG 58.053 45.000 0.00 0.00 0.00 3.28
5646 11820 3.006940 TGGGACAAGCTAATAGCAAACG 58.993 45.455 15.28 2.19 45.56 3.60
5647 11821 3.007635 GGGACAAGCTAATAGCAAACGT 58.992 45.455 15.28 5.41 45.56 3.99
5648 11822 3.181510 GGGACAAGCTAATAGCAAACGTG 60.182 47.826 15.28 6.69 45.56 4.49
5649 11823 3.181510 GGACAAGCTAATAGCAAACGTGG 60.182 47.826 15.28 0.00 45.56 4.94
5653 11827 3.408634 AGCTAATAGCAAACGTGGTTGT 58.591 40.909 15.28 0.00 45.56 3.32
5655 11829 5.183228 AGCTAATAGCAAACGTGGTTGTAT 58.817 37.500 15.28 0.00 45.56 2.29
5656 11830 5.646360 AGCTAATAGCAAACGTGGTTGTATT 59.354 36.000 15.28 5.45 45.56 1.89
5657 11831 6.150474 AGCTAATAGCAAACGTGGTTGTATTT 59.850 34.615 15.28 0.00 45.56 1.40
5660 11834 9.997482 CTAATAGCAAACGTGGTTGTATTTTAT 57.003 29.630 0.00 0.00 36.66 1.40
5665 11839 9.944663 AGCAAACGTGGTTGTATTTTATATATG 57.055 29.630 0.00 0.00 28.67 1.78
5666 11840 9.176181 GCAAACGTGGTTGTATTTTATATATGG 57.824 33.333 0.00 0.00 0.00 2.74
5667 11841 9.672086 CAAACGTGGTTGTATTTTATATATGGG 57.328 33.333 0.00 0.00 0.00 4.00
5669 11843 8.611654 ACGTGGTTGTATTTTATATATGGGTC 57.388 34.615 0.00 0.00 0.00 4.46
5671 11845 8.717821 CGTGGTTGTATTTTATATATGGGTCAG 58.282 37.037 0.00 0.00 0.00 3.51
5673 11847 8.221251 TGGTTGTATTTTATATATGGGTCAGCA 58.779 33.333 0.00 0.00 0.00 4.41
5674 11848 8.730680 GGTTGTATTTTATATATGGGTCAGCAG 58.269 37.037 0.00 0.00 0.00 4.24
5675 11849 9.502091 GTTGTATTTTATATATGGGTCAGCAGA 57.498 33.333 0.00 0.00 0.00 4.26
5677 11851 9.725019 TGTATTTTATATATGGGTCAGCAGAAG 57.275 33.333 0.00 0.00 0.00 2.85
5678 11852 9.944376 GTATTTTATATATGGGTCAGCAGAAGA 57.056 33.333 0.00 0.00 0.00 2.87
5680 11854 8.908786 TTTTATATATGGGTCAGCAGAAGAAG 57.091 34.615 0.00 0.00 0.00 2.85
5681 11855 7.618019 TTATATATGGGTCAGCAGAAGAAGT 57.382 36.000 0.00 0.00 0.00 3.01
5682 11856 2.486472 ATGGGTCAGCAGAAGAAGTG 57.514 50.000 0.00 0.00 0.00 3.16
5683 11857 1.131638 TGGGTCAGCAGAAGAAGTGT 58.868 50.000 0.00 0.00 0.00 3.55
5684 11858 1.490490 TGGGTCAGCAGAAGAAGTGTT 59.510 47.619 0.00 0.00 0.00 3.32
5685 11859 1.876156 GGGTCAGCAGAAGAAGTGTTG 59.124 52.381 0.00 0.00 0.00 3.33
5686 11860 2.565841 GGTCAGCAGAAGAAGTGTTGT 58.434 47.619 0.00 0.00 0.00 3.32
5688 11862 3.198068 GTCAGCAGAAGAAGTGTTGTGA 58.802 45.455 0.00 0.00 0.00 3.58
5689 11863 3.623060 GTCAGCAGAAGAAGTGTTGTGAA 59.377 43.478 0.00 0.00 0.00 3.18
5690 11864 3.623060 TCAGCAGAAGAAGTGTTGTGAAC 59.377 43.478 0.00 0.00 0.00 3.18
5691 11865 3.624861 CAGCAGAAGAAGTGTTGTGAACT 59.375 43.478 0.00 0.00 0.00 3.01
5692 11866 3.624861 AGCAGAAGAAGTGTTGTGAACTG 59.375 43.478 0.00 0.00 0.00 3.16
5693 11867 3.623060 GCAGAAGAAGTGTTGTGAACTGA 59.377 43.478 0.00 0.00 0.00 3.41
5694 11868 4.094887 GCAGAAGAAGTGTTGTGAACTGAA 59.905 41.667 0.00 0.00 0.00 3.02
5695 11869 5.391950 GCAGAAGAAGTGTTGTGAACTGAAA 60.392 40.000 0.00 0.00 0.00 2.69
5696 11870 6.611381 CAGAAGAAGTGTTGTGAACTGAAAA 58.389 36.000 0.00 0.00 0.00 2.29
5698 11872 7.219535 CAGAAGAAGTGTTGTGAACTGAAAATG 59.780 37.037 0.00 0.00 0.00 2.32
5699 11873 6.757897 AGAAGTGTTGTGAACTGAAAATGA 57.242 33.333 0.00 0.00 0.00 2.57
5701 11875 8.450578 AGAAGTGTTGTGAACTGAAAATGATA 57.549 30.769 0.00 0.00 0.00 2.15
5703 11877 7.566760 AGTGTTGTGAACTGAAAATGATACA 57.433 32.000 0.00 0.00 0.00 2.29
5706 11880 8.075574 GTGTTGTGAACTGAAAATGATACATGA 58.924 33.333 0.00 0.00 0.00 3.07
5710 11884 8.615211 TGTGAACTGAAAATGATACATGATAGC 58.385 33.333 0.00 0.00 0.00 2.97
5711 11885 7.795734 GTGAACTGAAAATGATACATGATAGCG 59.204 37.037 0.00 0.00 0.00 4.26
5713 11887 5.759763 ACTGAAAATGATACATGATAGCGCA 59.240 36.000 11.47 0.00 0.00 6.09
5714 11888 6.260714 ACTGAAAATGATACATGATAGCGCAA 59.739 34.615 11.47 0.00 0.00 4.85
5715 11889 7.040892 ACTGAAAATGATACATGATAGCGCAAT 60.041 33.333 11.47 0.00 0.00 3.56
5716 11890 8.321650 TGAAAATGATACATGATAGCGCAATA 57.678 30.769 11.47 0.00 0.00 1.90
5717 11891 8.782144 TGAAAATGATACATGATAGCGCAATAA 58.218 29.630 11.47 0.00 0.00 1.40
5722 11896 9.605275 ATGATACATGATAGCGCAATAATTAGT 57.395 29.630 11.47 0.59 0.00 2.24
5723 11897 9.087424 TGATACATGATAGCGCAATAATTAGTC 57.913 33.333 11.47 0.00 0.00 2.59
5724 11898 6.727824 ACATGATAGCGCAATAATTAGTCC 57.272 37.500 11.47 0.00 0.00 3.85
5725 11899 5.348724 ACATGATAGCGCAATAATTAGTCCG 59.651 40.000 11.47 0.00 0.00 4.79
5726 11900 4.878439 TGATAGCGCAATAATTAGTCCGT 58.122 39.130 11.47 0.00 0.00 4.69
5727 11901 5.294356 TGATAGCGCAATAATTAGTCCGTT 58.706 37.500 11.47 0.00 0.00 4.44
5728 11902 5.756347 TGATAGCGCAATAATTAGTCCGTTT 59.244 36.000 11.47 0.00 0.00 3.60
5729 11903 4.531659 AGCGCAATAATTAGTCCGTTTC 57.468 40.909 11.47 0.00 0.00 2.78
5730 11904 3.311596 AGCGCAATAATTAGTCCGTTTCC 59.688 43.478 11.47 0.00 0.00 3.13
5731 11905 3.547413 GCGCAATAATTAGTCCGTTTCCC 60.547 47.826 0.30 0.00 0.00 3.97
5732 11906 3.623960 CGCAATAATTAGTCCGTTTCCCA 59.376 43.478 0.00 0.00 0.00 4.37
5733 11907 4.095185 CGCAATAATTAGTCCGTTTCCCAA 59.905 41.667 0.00 0.00 0.00 4.12
5734 11908 5.392165 CGCAATAATTAGTCCGTTTCCCAAA 60.392 40.000 0.00 0.00 0.00 3.28
5735 11909 6.033966 GCAATAATTAGTCCGTTTCCCAAAG 58.966 40.000 0.00 0.00 0.00 2.77
5736 11910 6.127842 GCAATAATTAGTCCGTTTCCCAAAGA 60.128 38.462 0.00 0.00 0.00 2.52
5737 11911 7.576098 GCAATAATTAGTCCGTTTCCCAAAGAA 60.576 37.037 0.00 0.00 0.00 2.52
5738 11912 8.301002 CAATAATTAGTCCGTTTCCCAAAGAAA 58.699 33.333 0.00 0.00 42.28 2.52
5739 11913 6.911250 AATTAGTCCGTTTCCCAAAGAAAT 57.089 33.333 0.00 0.00 45.99 2.17
5740 11914 9.689501 ATAATTAGTCCGTTTCCCAAAGAAATA 57.310 29.630 0.00 0.00 45.99 1.40
5741 11915 8.411991 AATTAGTCCGTTTCCCAAAGAAATAA 57.588 30.769 0.00 0.00 45.99 1.40
5742 11916 5.700722 AGTCCGTTTCCCAAAGAAATAAC 57.299 39.130 0.00 0.00 45.99 1.89
5743 11917 5.134661 AGTCCGTTTCCCAAAGAAATAACA 58.865 37.500 0.00 0.00 45.99 2.41
5744 11918 5.240844 AGTCCGTTTCCCAAAGAAATAACAG 59.759 40.000 0.00 0.00 45.99 3.16
5745 11919 4.521256 TCCGTTTCCCAAAGAAATAACAGG 59.479 41.667 0.00 0.00 45.99 4.00
5746 11920 4.234574 CGTTTCCCAAAGAAATAACAGGC 58.765 43.478 0.00 0.00 45.99 4.85
5849 12027 4.398988 ACAAATTGCACGGTCATATGATGT 59.601 37.500 9.02 8.14 0.00 3.06
5861 12039 7.229907 ACGGTCATATGATGTGTGTACAGTATA 59.770 37.037 9.02 0.00 40.79 1.47
5917 12123 3.332919 TCTCTGATTTCTGAACAGCAGC 58.667 45.455 10.75 0.00 44.52 5.25
5937 12143 3.797353 CGTGTAGCCCCTGCCCAT 61.797 66.667 0.00 0.00 38.69 4.00
5971 12178 4.626081 GCACCGCCATATCCGCCT 62.626 66.667 0.00 0.00 0.00 5.52
5996 12203 2.555227 GCCTGACCCAAATCCTCTTTGA 60.555 50.000 0.00 0.00 0.00 2.69
6007 12214 3.418684 TCCTCTTTGAAGGTGCTTACC 57.581 47.619 0.00 0.00 37.69 2.85
6022 12229 3.193267 TGCTTACCATGGCTTCAAATGTC 59.807 43.478 13.04 0.00 0.00 3.06
6029 12236 2.964740 TGGCTTCAAATGTCGAGAGAG 58.035 47.619 0.00 0.00 43.49 3.20
6133 12340 0.739112 GCTCCTCTTCAGGTTGCTCG 60.739 60.000 0.00 0.00 41.28 5.03
6164 12371 2.095768 CCACCGCCAAATATTATCTGCG 60.096 50.000 11.56 11.56 41.51 5.18
6170 12377 5.560148 CGCCAAATATTATCTGCGGATTAC 58.440 41.667 14.52 0.00 38.46 1.89
6188 12395 7.207383 CGGATTACAATGGTGTCACTAATCTA 58.793 38.462 15.84 0.00 39.30 1.98
6195 12402 6.932356 ATGGTGTCACTAATCTATGCAAAG 57.068 37.500 2.35 0.00 0.00 2.77
6199 12410 6.183360 GGTGTCACTAATCTATGCAAAGTGTC 60.183 42.308 2.35 0.00 38.88 3.67
6203 12414 9.098355 GTCACTAATCTATGCAAAGTGTCAATA 57.902 33.333 0.00 0.00 38.88 1.90
6205 12416 9.708222 CACTAATCTATGCAAAGTGTCAATAAC 57.292 33.333 0.00 0.00 34.28 1.89
6233 12444 5.689514 CAGCACTAGCACTTGATGTAGATAC 59.310 44.000 0.00 0.00 45.49 2.24
6234 12445 5.360999 AGCACTAGCACTTGATGTAGATACA 59.639 40.000 0.00 0.00 45.49 2.29
6263 12474 1.878088 GGTTTTCCAGAACGAGGTTCC 59.122 52.381 4.96 0.00 42.85 3.62
6333 12544 3.578716 CCAGGGTGACTTCTTGTTCTCTA 59.421 47.826 0.00 0.00 0.00 2.43
6352 12563 7.737972 TCTCTATCTTGTATAGAGTGTCAGC 57.262 40.000 17.33 0.00 44.79 4.26
6374 12585 3.963665 TGTTTGACAGCTTAATGTGTGC 58.036 40.909 0.00 0.00 32.25 4.57
6383 12594 2.412870 CTTAATGTGTGCGTGGTCAGA 58.587 47.619 0.00 0.00 0.00 3.27
6417 12628 7.337689 TGTCACAATGATTCCTAGAATTTGAGG 59.662 37.037 8.14 1.01 0.00 3.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 2.256158 CACAGGGCATGCACGTTG 59.744 61.111 21.36 14.01 0.00 4.10
124 156 1.242076 ATGATTATTGCTCGCTGGCC 58.758 50.000 0.00 0.00 0.00 5.36
247 328 0.448593 TTATTTGGCGGCGTACTTGC 59.551 50.000 9.37 0.00 0.00 4.01
265 349 3.575687 CCTGCCAGAAAGAAGTCCATTTT 59.424 43.478 0.00 0.00 0.00 1.82
365 449 8.663025 CATAACCACTCATGCATATATGTCTTC 58.337 37.037 14.14 0.00 0.00 2.87
386 482 6.634805 TCATCAGAGGAAGTTCAGTCATAAC 58.365 40.000 5.01 0.00 0.00 1.89
408 507 1.229082 AGTCCTGTAGGGCCGTTCA 60.229 57.895 1.81 3.47 41.83 3.18
506 607 3.081159 GACTCCTCGTCGTCGTCGG 62.081 68.421 11.74 4.59 38.33 4.79
607 723 5.067273 ACGTGTGTGGAATAGGATTCAAAA 58.933 37.500 0.00 0.00 0.00 2.44
608 724 4.647611 ACGTGTGTGGAATAGGATTCAAA 58.352 39.130 0.00 0.00 0.00 2.69
614 766 5.186215 TCAGATTTACGTGTGTGGAATAGGA 59.814 40.000 0.00 0.00 0.00 2.94
646 803 4.650754 AATACATATATCGGCGGAGGAC 57.349 45.455 7.21 0.00 0.00 3.85
745 933 2.202837 CCGGTGCTAACCTACGCC 60.203 66.667 0.00 0.00 45.17 5.68
849 1045 8.002459 GGCCTTTATATATAGAGAGAGGCTACT 58.998 40.741 19.38 0.00 45.82 2.57
851 1047 7.883823 TGGCCTTTATATATAGAGAGAGGCTA 58.116 38.462 19.38 13.04 45.82 3.93
853 1049 7.441017 CATGGCCTTTATATATAGAGAGAGGC 58.559 42.308 13.63 13.63 45.82 4.70
857 1060 7.129457 TGCCATGGCCTTTATATATAGAGAG 57.871 40.000 33.44 3.97 41.09 3.20
868 1078 0.896923 CAGCTTTGCCATGGCCTTTA 59.103 50.000 33.44 12.76 41.09 1.85
869 1079 1.675219 CAGCTTTGCCATGGCCTTT 59.325 52.632 33.44 12.06 41.09 3.11
952 1238 3.452627 GCTTATCTCTCCTTGGTCCAAGA 59.547 47.826 29.91 12.55 43.42 3.02
1063 1352 9.952188 AAAAGCAAGAGAAGTAATTAAACAGTC 57.048 29.630 0.00 0.00 0.00 3.51
1085 1378 8.075593 AGCATATAAAAGCACAAACACAAAAG 57.924 30.769 0.00 0.00 0.00 2.27
1126 1431 3.715628 AACAAATGACCACTCAAGCAC 57.284 42.857 0.00 0.00 0.00 4.40
1129 1434 4.916983 TCCAAACAAATGACCACTCAAG 57.083 40.909 0.00 0.00 0.00 3.02
1130 1435 6.549364 ACTTATCCAAACAAATGACCACTCAA 59.451 34.615 0.00 0.00 0.00 3.02
1187 1661 4.383989 GCACATCCCAGAGAAGAGAGAAAT 60.384 45.833 0.00 0.00 0.00 2.17
1271 1778 3.049344 GGTCCCTAAAGATGATCACCCT 58.951 50.000 0.00 0.00 0.00 4.34
1272 1779 2.777692 TGGTCCCTAAAGATGATCACCC 59.222 50.000 0.00 0.00 0.00 4.61
1403 1953 7.677747 GCCATCTGCAAAACCATGAATTTATTG 60.678 37.037 0.00 0.00 40.77 1.90
1404 1954 6.316890 GCCATCTGCAAAACCATGAATTTATT 59.683 34.615 0.00 0.00 40.77 1.40
1405 1955 5.818857 GCCATCTGCAAAACCATGAATTTAT 59.181 36.000 0.00 0.00 40.77 1.40
1407 1957 4.004982 GCCATCTGCAAAACCATGAATTT 58.995 39.130 0.00 0.00 40.77 1.82
1409 1959 3.255969 GCCATCTGCAAAACCATGAAT 57.744 42.857 0.00 0.00 40.77 2.57
1410 1960 2.747396 GCCATCTGCAAAACCATGAA 57.253 45.000 0.00 0.00 40.77 2.57
1512 2155 3.276882 ACCAATTACGAAAAGTTGCGG 57.723 42.857 0.00 0.00 0.00 5.69
1514 2157 8.730970 TTATGTAACCAATTACGAAAAGTTGC 57.269 30.769 0.00 0.00 43.23 4.17
1748 2428 3.119029 GGCTTGGTGTGCATGTATTTGAT 60.119 43.478 0.00 0.00 0.00 2.57
1759 2910 1.581447 GCTACTTGGCTTGGTGTGC 59.419 57.895 0.00 0.00 0.00 4.57
1784 2937 8.355169 GTGAAGCAAATCACATATGATAATGGT 58.645 33.333 10.38 4.66 45.26 3.55
1996 3157 1.371183 CTCGTCCTTGCTGGTGGAA 59.629 57.895 0.00 0.00 37.07 3.53
2056 3217 4.353437 GTCCTTGACGCCGTCGGT 62.353 66.667 13.18 0.00 40.69 4.69
2134 3298 2.472029 GGTCCTGATCTCTTCTCCCAA 58.528 52.381 0.00 0.00 0.00 4.12
2364 3546 3.351885 ACCTCCTCCTCGGCCTCT 61.352 66.667 0.00 0.00 0.00 3.69
2409 3591 3.637273 GCCCTCACCGACACCCTT 61.637 66.667 0.00 0.00 0.00 3.95
2458 3642 1.668047 CGGAGGGAGTACGTTGTTGAC 60.668 57.143 0.00 0.00 0.00 3.18
2459 3643 0.599558 CGGAGGGAGTACGTTGTTGA 59.400 55.000 0.00 0.00 0.00 3.18
2460 3644 0.316204 ACGGAGGGAGTACGTTGTTG 59.684 55.000 0.00 0.00 37.61 3.33
2461 3645 0.600057 GACGGAGGGAGTACGTTGTT 59.400 55.000 0.00 0.00 41.40 2.83
2462 3646 1.246737 GGACGGAGGGAGTACGTTGT 61.247 60.000 0.00 0.00 41.40 3.32
2463 3647 1.509923 GGACGGAGGGAGTACGTTG 59.490 63.158 0.00 0.00 41.40 4.10
2464 3648 2.042831 CGGACGGAGGGAGTACGTT 61.043 63.158 0.00 0.00 40.75 3.99
2465 3649 2.437359 CGGACGGAGGGAGTACGT 60.437 66.667 0.00 0.00 40.75 3.57
2467 3651 0.962356 TTCACGGACGGAGGGAGTAC 60.962 60.000 0.00 0.00 0.00 2.73
2479 3663 8.757982 AAGGTAGAAGTATACTTATTCACGGA 57.242 34.615 18.03 0.00 36.11 4.69
2497 3681 9.457436 AAACTTTGACTTAAGACAAAAGGTAGA 57.543 29.630 25.68 9.24 38.68 2.59
2553 3737 9.445878 CCAATTTGATGTCAGATATGCTACTAT 57.554 33.333 0.00 0.00 0.00 2.12
2554 3738 8.432013 ACCAATTTGATGTCAGATATGCTACTA 58.568 33.333 0.00 0.00 0.00 1.82
2555 3739 7.285566 ACCAATTTGATGTCAGATATGCTACT 58.714 34.615 0.00 0.00 0.00 2.57
2556 3740 7.502120 ACCAATTTGATGTCAGATATGCTAC 57.498 36.000 0.00 0.00 0.00 3.58
2590 3774 9.268268 TCACTAGATTTGTTTCGAAATGTACTT 57.732 29.630 14.69 2.38 0.00 2.24
2591 3775 8.827177 TCACTAGATTTGTTTCGAAATGTACT 57.173 30.769 14.69 12.02 0.00 2.73
2594 3778 9.436957 AGTATCACTAGATTTGTTTCGAAATGT 57.563 29.630 14.69 0.00 35.67 2.71
2615 3799 9.831737 CAGCATTTATGGCACTAAATTAGTATC 57.168 33.333 5.23 2.20 37.23 2.24
2616 3800 8.299570 GCAGCATTTATGGCACTAAATTAGTAT 58.700 33.333 5.23 0.00 37.23 2.12
2617 3801 7.502226 AGCAGCATTTATGGCACTAAATTAGTA 59.498 33.333 5.23 0.00 37.23 1.82
2618 3802 6.322201 AGCAGCATTTATGGCACTAAATTAGT 59.678 34.615 0.00 0.00 40.28 2.24
2619 3803 6.742109 AGCAGCATTTATGGCACTAAATTAG 58.258 36.000 0.00 0.00 30.68 1.73
2622 3806 5.829924 AGTAGCAGCATTTATGGCACTAAAT 59.170 36.000 0.00 0.00 32.76 1.40
2623 3807 5.192927 AGTAGCAGCATTTATGGCACTAAA 58.807 37.500 0.00 0.00 0.00 1.85
2624 3808 4.780815 AGTAGCAGCATTTATGGCACTAA 58.219 39.130 0.00 0.00 0.00 2.24
2625 3809 4.422073 AGTAGCAGCATTTATGGCACTA 57.578 40.909 0.00 0.00 0.00 2.74
2627 3811 4.376340 AAAGTAGCAGCATTTATGGCAC 57.624 40.909 0.00 0.00 0.00 5.01
2628 3812 5.404466 AAAAAGTAGCAGCATTTATGGCA 57.596 34.783 0.00 0.00 0.00 4.92
2692 3876 8.382130 CGCGAATAAGTGTACATTTAGGTTTTA 58.618 33.333 15.04 0.00 0.00 1.52
2695 3879 5.292589 CCGCGAATAAGTGTACATTTAGGTT 59.707 40.000 8.23 6.79 0.00 3.50
2696 3880 4.807304 CCGCGAATAAGTGTACATTTAGGT 59.193 41.667 8.23 6.84 0.00 3.08
2697 3881 5.045215 TCCGCGAATAAGTGTACATTTAGG 58.955 41.667 8.23 10.68 0.00 2.69
2698 3882 5.331309 CGTCCGCGAATAAGTGTACATTTAG 60.331 44.000 8.23 4.70 41.33 1.85
2699 3883 4.500117 CGTCCGCGAATAAGTGTACATTTA 59.500 41.667 8.23 12.58 41.33 1.40
2700 3884 3.305094 CGTCCGCGAATAAGTGTACATTT 59.695 43.478 8.23 8.77 41.33 2.32
2702 3886 2.456989 CGTCCGCGAATAAGTGTACAT 58.543 47.619 8.23 0.00 41.33 2.29
2703 3887 1.467883 CCGTCCGCGAATAAGTGTACA 60.468 52.381 8.23 0.00 41.33 2.90
2704 3888 1.194495 CCGTCCGCGAATAAGTGTAC 58.806 55.000 8.23 0.00 41.33 2.90
2705 3889 1.064505 CTCCGTCCGCGAATAAGTGTA 59.935 52.381 8.23 0.00 41.33 2.90
2706 3890 0.179145 CTCCGTCCGCGAATAAGTGT 60.179 55.000 8.23 0.00 41.33 3.55
2707 3891 0.099968 TCTCCGTCCGCGAATAAGTG 59.900 55.000 8.23 0.00 41.33 3.16
2708 3892 0.381089 CTCTCCGTCCGCGAATAAGT 59.619 55.000 8.23 0.00 41.33 2.24
2709 3893 0.661552 TCTCTCCGTCCGCGAATAAG 59.338 55.000 8.23 0.00 41.33 1.73
2710 3894 0.661552 CTCTCTCCGTCCGCGAATAA 59.338 55.000 8.23 0.00 41.33 1.40
2711 3895 0.463295 ACTCTCTCCGTCCGCGAATA 60.463 55.000 8.23 0.00 41.33 1.75
2713 3897 1.078918 TACTCTCTCCGTCCGCGAA 60.079 57.895 8.23 0.00 41.33 4.70
2714 3898 1.812922 GTACTCTCTCCGTCCGCGA 60.813 63.158 8.23 0.00 41.33 5.87
2715 3899 2.104859 TGTACTCTCTCCGTCCGCG 61.105 63.158 0.00 0.00 37.95 6.46
2717 3901 1.130749 CTTGTGTACTCTCTCCGTCCG 59.869 57.143 0.00 0.00 0.00 4.79
2718 3902 2.095161 CACTTGTGTACTCTCTCCGTCC 60.095 54.545 0.00 0.00 0.00 4.79
2719 3903 2.812591 TCACTTGTGTACTCTCTCCGTC 59.187 50.000 0.46 0.00 0.00 4.79
2720 3904 2.553172 GTCACTTGTGTACTCTCTCCGT 59.447 50.000 0.46 0.00 0.00 4.69
2721 3905 2.095161 GGTCACTTGTGTACTCTCTCCG 60.095 54.545 0.46 0.00 0.00 4.63
2722 3906 2.891580 TGGTCACTTGTGTACTCTCTCC 59.108 50.000 0.46 0.00 0.00 3.71
2724 3908 3.833732 TCTGGTCACTTGTGTACTCTCT 58.166 45.455 0.46 0.00 0.00 3.10
2727 3911 4.585955 TCTTCTGGTCACTTGTGTACTC 57.414 45.455 0.46 0.00 0.00 2.59
2728 3912 5.552870 AATCTTCTGGTCACTTGTGTACT 57.447 39.130 0.46 0.00 0.00 2.73
2755 3949 7.739825 TCCCAATCACCTAAGAGATCAATTAG 58.260 38.462 9.06 9.06 0.00 1.73
2757 3951 6.581388 TCCCAATCACCTAAGAGATCAATT 57.419 37.500 0.00 0.00 0.00 2.32
2759 3953 6.012508 AGTTTCCCAATCACCTAAGAGATCAA 60.013 38.462 0.00 0.00 0.00 2.57
2760 3954 5.488919 AGTTTCCCAATCACCTAAGAGATCA 59.511 40.000 0.00 0.00 0.00 2.92
2764 3958 4.184629 CGAGTTTCCCAATCACCTAAGAG 58.815 47.826 0.00 0.00 0.00 2.85
2768 3962 6.989155 ATATACGAGTTTCCCAATCACCTA 57.011 37.500 0.00 0.00 0.00 3.08
2771 3965 9.871238 ACATATATATACGAGTTTCCCAATCAC 57.129 33.333 0.00 0.00 0.00 3.06
2772 3966 9.869757 CACATATATATACGAGTTTCCCAATCA 57.130 33.333 0.00 0.00 0.00 2.57
2851 4115 1.694150 CCCTTCGATATCTTCTGCCCA 59.306 52.381 0.34 0.00 0.00 5.36
2866 4130 0.323451 GTGGACATGGGTTCCCCTTC 60.323 60.000 5.34 0.00 45.70 3.46
3000 4291 1.813178 TGGTTTGCGAAACACACTTCA 59.187 42.857 0.00 0.00 43.15 3.02
3146 4760 8.677148 TCTCACAAGTATAAGCTCAACTTTTT 57.323 30.769 5.76 0.00 39.97 1.94
3153 4767 5.337571 CCAACCTCTCACAAGTATAAGCTCA 60.338 44.000 0.00 0.00 0.00 4.26
3164 4778 2.363306 AATGCACCAACCTCTCACAA 57.637 45.000 0.00 0.00 0.00 3.33
3167 4781 4.225042 ACTGTATAATGCACCAACCTCTCA 59.775 41.667 0.00 0.00 0.00 3.27
3203 4917 7.985476 AGACGGTGAAAATATTTGTTATGGAG 58.015 34.615 0.39 0.00 0.00 3.86
3214 5250 9.010029 ACACTTATTTTGAGACGGTGAAAATAT 57.990 29.630 5.64 0.00 33.64 1.28
3217 5253 6.540914 AGACACTTATTTTGAGACGGTGAAAA 59.459 34.615 0.00 0.00 0.00 2.29
3220 5256 5.209818 AGACACTTATTTTGAGACGGTGA 57.790 39.130 0.00 0.00 0.00 4.02
3254 5290 5.105554 GGGACCATGCATGTACACAAAATTA 60.106 40.000 24.58 0.00 0.00 1.40
3255 5291 4.322650 GGGACCATGCATGTACACAAAATT 60.323 41.667 24.58 0.00 0.00 1.82
3259 5295 1.074566 TGGGACCATGCATGTACACAA 59.925 47.619 24.58 3.63 0.00 3.33
3260 5296 0.695347 TGGGACCATGCATGTACACA 59.305 50.000 24.58 20.56 0.00 3.72
3266 5302 0.386476 CGGATTTGGGACCATGCATG 59.614 55.000 20.19 20.19 0.00 4.06
3269 5305 2.785425 GCCGGATTTGGGACCATGC 61.785 63.158 5.05 0.00 0.00 4.06
3272 5308 3.323286 TCGCCGGATTTGGGACCA 61.323 61.111 5.05 0.00 0.00 4.02
3273 5309 2.822701 GTCGCCGGATTTGGGACC 60.823 66.667 5.05 0.00 39.12 4.46
3274 5310 2.822701 GGTCGCCGGATTTGGGAC 60.823 66.667 5.05 0.76 42.91 4.46
3275 5311 2.896592 TTGGTCGCCGGATTTGGGA 61.897 57.895 5.05 0.00 0.00 4.37
3276 5312 2.360600 TTGGTCGCCGGATTTGGG 60.361 61.111 5.05 0.00 0.00 4.12
3277 5313 2.696759 GGTTGGTCGCCGGATTTGG 61.697 63.158 5.05 0.00 0.00 3.28
3278 5314 0.391927 TAGGTTGGTCGCCGGATTTG 60.392 55.000 5.05 0.00 0.00 2.32
3279 5315 0.325602 TTAGGTTGGTCGCCGGATTT 59.674 50.000 5.05 0.00 0.00 2.17
3280 5316 0.544697 ATTAGGTTGGTCGCCGGATT 59.455 50.000 5.05 0.00 0.00 3.01
3281 5317 0.544697 AATTAGGTTGGTCGCCGGAT 59.455 50.000 5.05 0.00 0.00 4.18
3285 5390 1.674441 GGCTTAATTAGGTTGGTCGCC 59.326 52.381 0.00 0.00 0.00 5.54
3296 5401 4.652421 CATGCACATGGTGGCTTAATTA 57.348 40.909 2.56 0.00 35.24 1.40
3396 5507 2.579684 GATCCCCGTGCTCACCAGTC 62.580 65.000 0.00 0.00 0.00 3.51
3425 5549 1.137086 CGATCAGGTCAGGTTCCGATT 59.863 52.381 0.00 0.00 0.00 3.34
3523 5701 4.554363 CGCCGATCGAGAAGCCGT 62.554 66.667 18.66 0.00 41.67 5.68
3563 5758 1.078426 CGGTCAGCCTAAACCCCAG 60.078 63.158 0.00 0.00 31.49 4.45
3579 5938 2.476185 GGATCAGTTTGTTTCGATGCGG 60.476 50.000 0.00 0.00 0.00 5.69
3617 6097 8.896744 CCATCATAGTCTTCAGCATTTCTAAAA 58.103 33.333 0.00 0.00 0.00 1.52
3657 6146 2.347114 CACATGTGGGGACGCTGA 59.653 61.111 18.51 0.00 42.82 4.26
3665 6154 1.859427 GCAGACAGCACACATGTGGG 61.859 60.000 28.64 26.54 45.72 4.61
3695 6199 7.925483 TCTTTGTATTTTTGAGTGGATTTGGTG 59.075 33.333 0.00 0.00 0.00 4.17
3701 6205 6.314917 AGGGTCTTTGTATTTTTGAGTGGAT 58.685 36.000 0.00 0.00 0.00 3.41
3760 6405 3.399330 TGCAGAGTAAAAAGAACCGGAG 58.601 45.455 9.46 0.00 0.00 4.63
3774 6419 8.263640 ACTTCAGACAATTCTTATATGCAGAGT 58.736 33.333 0.00 0.00 0.00 3.24
3776 6421 8.481314 AGACTTCAGACAATTCTTATATGCAGA 58.519 33.333 0.00 0.00 0.00 4.26
3777 6422 8.659925 AGACTTCAGACAATTCTTATATGCAG 57.340 34.615 0.00 0.00 0.00 4.41
3785 6430 8.632906 ATGATCAAAGACTTCAGACAATTCTT 57.367 30.769 0.00 0.00 0.00 2.52
3786 6431 9.730705 TTATGATCAAAGACTTCAGACAATTCT 57.269 29.630 0.00 0.00 0.00 2.40
3817 6462 8.790718 GCATGGTAGATGTTGATATTTTCTCAT 58.209 33.333 0.00 0.00 0.00 2.90
3818 6463 7.774625 TGCATGGTAGATGTTGATATTTTCTCA 59.225 33.333 0.00 0.00 0.00 3.27
3819 6464 8.158169 TGCATGGTAGATGTTGATATTTTCTC 57.842 34.615 0.00 0.00 0.00 2.87
3820 6465 8.523915 TTGCATGGTAGATGTTGATATTTTCT 57.476 30.769 0.00 0.00 0.00 2.52
3821 6466 9.585099 TTTTGCATGGTAGATGTTGATATTTTC 57.415 29.630 0.00 0.00 0.00 2.29
3823 6468 8.752187 ACTTTTGCATGGTAGATGTTGATATTT 58.248 29.630 0.00 0.00 0.00 1.40
3825 6470 7.886629 ACTTTTGCATGGTAGATGTTGATAT 57.113 32.000 0.00 0.00 0.00 1.63
3826 6471 7.701539 AACTTTTGCATGGTAGATGTTGATA 57.298 32.000 0.00 0.00 0.00 2.15
3827 6472 6.594788 AACTTTTGCATGGTAGATGTTGAT 57.405 33.333 0.00 0.00 0.00 2.57
3828 6473 7.701539 ATAACTTTTGCATGGTAGATGTTGA 57.298 32.000 0.00 0.00 0.00 3.18
3829 6474 8.458052 TGTATAACTTTTGCATGGTAGATGTTG 58.542 33.333 0.00 0.00 0.00 3.33
3830 6475 8.574251 TGTATAACTTTTGCATGGTAGATGTT 57.426 30.769 0.00 0.00 0.00 2.71
3831 6476 8.574251 TTGTATAACTTTTGCATGGTAGATGT 57.426 30.769 0.00 0.00 0.00 3.06
3929 6574 5.292589 TCAAGTCTCGTAAAGTTTGACCAAC 59.707 40.000 0.00 0.00 35.32 3.77
3930 6575 5.292589 GTCAAGTCTCGTAAAGTTTGACCAA 59.707 40.000 0.00 0.00 40.61 3.67
3931 6576 4.807304 GTCAAGTCTCGTAAAGTTTGACCA 59.193 41.667 0.00 0.00 40.61 4.02
3932 6577 4.807304 TGTCAAGTCTCGTAAAGTTTGACC 59.193 41.667 11.30 0.00 42.88 4.02
3933 6578 5.961395 TGTCAAGTCTCGTAAAGTTTGAC 57.039 39.130 0.00 7.91 43.30 3.18
3934 6579 8.139350 TCTAATGTCAAGTCTCGTAAAGTTTGA 58.861 33.333 0.00 0.00 31.73 2.69
3935 6580 8.215132 GTCTAATGTCAAGTCTCGTAAAGTTTG 58.785 37.037 0.00 0.00 0.00 2.93
3936 6581 7.924412 TGTCTAATGTCAAGTCTCGTAAAGTTT 59.076 33.333 0.00 0.00 0.00 2.66
3937 6582 7.431249 TGTCTAATGTCAAGTCTCGTAAAGTT 58.569 34.615 0.00 0.00 0.00 2.66
3938 6583 6.978338 TGTCTAATGTCAAGTCTCGTAAAGT 58.022 36.000 0.00 0.00 0.00 2.66
3939 6584 7.869016 TTGTCTAATGTCAAGTCTCGTAAAG 57.131 36.000 0.00 0.00 0.00 1.85
3940 6585 8.827177 ATTTGTCTAATGTCAAGTCTCGTAAA 57.173 30.769 0.00 0.00 0.00 2.01
3941 6586 8.304596 AGATTTGTCTAATGTCAAGTCTCGTAA 58.695 33.333 0.00 0.00 34.98 3.18
3942 6587 7.827701 AGATTTGTCTAATGTCAAGTCTCGTA 58.172 34.615 0.00 0.00 34.98 3.43
3943 6588 6.692486 AGATTTGTCTAATGTCAAGTCTCGT 58.308 36.000 0.00 0.00 34.98 4.18
3944 6589 7.588143 AAGATTTGTCTAATGTCAAGTCTCG 57.412 36.000 0.00 0.00 37.33 4.04
3949 6594 9.803130 CGCATATAAGATTTGTCTAATGTCAAG 57.197 33.333 0.00 0.00 0.00 3.02
3950 6595 9.541143 TCGCATATAAGATTTGTCTAATGTCAA 57.459 29.630 0.00 0.00 0.00 3.18
3951 6596 9.541143 TTCGCATATAAGATTTGTCTAATGTCA 57.459 29.630 0.00 0.00 0.00 3.58
3952 6597 9.798885 GTTCGCATATAAGATTTGTCTAATGTC 57.201 33.333 0.00 0.00 0.00 3.06
3953 6598 9.547753 AGTTCGCATATAAGATTTGTCTAATGT 57.452 29.630 0.00 0.00 0.00 2.71
3963 6608 8.837389 GGTCCTTTTTAGTTCGCATATAAGATT 58.163 33.333 0.00 0.00 0.00 2.40
3964 6609 7.990886 TGGTCCTTTTTAGTTCGCATATAAGAT 59.009 33.333 0.00 0.00 0.00 2.40
3965 6610 7.332557 TGGTCCTTTTTAGTTCGCATATAAGA 58.667 34.615 0.00 0.00 0.00 2.10
3966 6611 7.494625 TCTGGTCCTTTTTAGTTCGCATATAAG 59.505 37.037 0.00 0.00 0.00 1.73
3967 6612 7.332557 TCTGGTCCTTTTTAGTTCGCATATAA 58.667 34.615 0.00 0.00 0.00 0.98
3968 6613 6.880484 TCTGGTCCTTTTTAGTTCGCATATA 58.120 36.000 0.00 0.00 0.00 0.86
3969 6614 5.741011 TCTGGTCCTTTTTAGTTCGCATAT 58.259 37.500 0.00 0.00 0.00 1.78
3970 6615 5.155278 TCTGGTCCTTTTTAGTTCGCATA 57.845 39.130 0.00 0.00 0.00 3.14
3971 6616 4.003648 CTCTGGTCCTTTTTAGTTCGCAT 58.996 43.478 0.00 0.00 0.00 4.73
3972 6617 3.181458 ACTCTGGTCCTTTTTAGTTCGCA 60.181 43.478 0.00 0.00 0.00 5.10
3973 6618 3.400255 ACTCTGGTCCTTTTTAGTTCGC 58.600 45.455 0.00 0.00 0.00 4.70
3974 6619 5.780984 AGTACTCTGGTCCTTTTTAGTTCG 58.219 41.667 0.00 0.00 0.00 3.95
3975 6620 7.664758 TGTAGTACTCTGGTCCTTTTTAGTTC 58.335 38.462 0.00 0.00 0.00 3.01
3976 6621 7.607615 TGTAGTACTCTGGTCCTTTTTAGTT 57.392 36.000 0.00 0.00 0.00 2.24
3977 6622 7.607615 TTGTAGTACTCTGGTCCTTTTTAGT 57.392 36.000 0.00 0.00 0.00 2.24
3978 6623 8.771766 GTTTTGTAGTACTCTGGTCCTTTTTAG 58.228 37.037 0.00 0.00 0.00 1.85
3979 6624 7.716560 GGTTTTGTAGTACTCTGGTCCTTTTTA 59.283 37.037 0.00 0.00 0.00 1.52
3980 6625 6.544931 GGTTTTGTAGTACTCTGGTCCTTTTT 59.455 38.462 0.00 0.00 0.00 1.94
3981 6626 6.060136 GGTTTTGTAGTACTCTGGTCCTTTT 58.940 40.000 0.00 0.00 0.00 2.27
3982 6627 5.368816 AGGTTTTGTAGTACTCTGGTCCTTT 59.631 40.000 0.00 0.00 0.00 3.11
3983 6628 4.906060 AGGTTTTGTAGTACTCTGGTCCTT 59.094 41.667 0.00 0.00 0.00 3.36
3984 6629 4.490706 AGGTTTTGTAGTACTCTGGTCCT 58.509 43.478 0.00 0.00 0.00 3.85
3985 6630 4.886496 AGGTTTTGTAGTACTCTGGTCC 57.114 45.455 0.00 0.00 0.00 4.46
3986 6631 6.388278 CAGTAGGTTTTGTAGTACTCTGGTC 58.612 44.000 0.00 0.00 0.00 4.02
3987 6632 5.279356 GCAGTAGGTTTTGTAGTACTCTGGT 60.279 44.000 0.00 0.00 0.00 4.00
3988 6633 5.169295 GCAGTAGGTTTTGTAGTACTCTGG 58.831 45.833 0.00 0.00 0.00 3.86
3989 6634 5.779922 TGCAGTAGGTTTTGTAGTACTCTG 58.220 41.667 0.00 0.00 0.00 3.35
3990 6635 6.415206 TTGCAGTAGGTTTTGTAGTACTCT 57.585 37.500 0.00 0.00 0.00 3.24
3991 6636 5.120363 GCTTGCAGTAGGTTTTGTAGTACTC 59.880 44.000 0.00 0.00 0.00 2.59
3992 6637 4.995487 GCTTGCAGTAGGTTTTGTAGTACT 59.005 41.667 0.00 0.00 0.00 2.73
3993 6638 4.753107 TGCTTGCAGTAGGTTTTGTAGTAC 59.247 41.667 0.00 0.00 0.00 2.73
4032 6680 9.560860 ACCTATGGTGGATGATTAGACATTATA 57.439 33.333 0.00 0.00 32.98 0.98
4033 6681 8.454859 ACCTATGGTGGATGATTAGACATTAT 57.545 34.615 0.00 0.00 32.98 1.28
4034 6682 7.734865 AGACCTATGGTGGATGATTAGACATTA 59.265 37.037 0.00 0.00 35.25 1.90
4045 6693 2.959030 TCGAGAAGACCTATGGTGGATG 59.041 50.000 0.00 0.00 35.25 3.51
4093 6745 8.467598 CGACAGCCCTAAATGTACAGTATATAT 58.532 37.037 0.33 0.00 0.00 0.86
4094 6746 7.449395 ACGACAGCCCTAAATGTACAGTATATA 59.551 37.037 0.33 0.00 0.00 0.86
4096 6748 5.595542 ACGACAGCCCTAAATGTACAGTATA 59.404 40.000 0.33 0.00 0.00 1.47
4097 6749 4.404715 ACGACAGCCCTAAATGTACAGTAT 59.595 41.667 0.33 0.00 0.00 2.12
4098 6750 3.765511 ACGACAGCCCTAAATGTACAGTA 59.234 43.478 0.33 0.00 0.00 2.74
4099 6751 2.565834 ACGACAGCCCTAAATGTACAGT 59.434 45.455 0.33 0.00 0.00 3.55
4100 6752 3.247006 ACGACAGCCCTAAATGTACAG 57.753 47.619 0.33 0.00 0.00 2.74
4101 6753 4.403113 TCATACGACAGCCCTAAATGTACA 59.597 41.667 0.00 0.00 0.00 2.90
4104 6756 3.431766 GGTCATACGACAGCCCTAAATGT 60.432 47.826 0.00 0.00 44.54 2.71
4116 6947 2.865343 AGGTTCATCGGTCATACGAC 57.135 50.000 0.00 0.00 46.64 4.34
4131 6962 6.865834 TGGATGTATTTTTGGCATTAGGTT 57.134 33.333 0.00 0.00 0.00 3.50
4300 9171 4.870021 AATCCCTGCTACCAAAGAGAAT 57.130 40.909 0.00 0.00 0.00 2.40
4407 10367 2.253051 TGGAGTGTGTGTGCATGCG 61.253 57.895 14.09 0.00 0.00 4.73
4464 10566 4.041938 ACCTGGGGAAGAAATTGTACGTTA 59.958 41.667 0.00 0.00 0.00 3.18
4473 10575 1.005215 CTCTGCACCTGGGGAAGAAAT 59.995 52.381 8.30 0.00 0.00 2.17
4477 10579 0.107312 CATCTCTGCACCTGGGGAAG 60.107 60.000 0.00 0.00 0.00 3.46
4503 10605 2.363680 GGTGATCAGGATCGACATGTCT 59.636 50.000 22.95 5.76 40.63 3.41
4767 10878 3.728279 GATGGTGGGGTACGACGGC 62.728 68.421 0.00 0.00 0.00 5.68
4938 11052 4.603535 AAGCCGGGCAGGTTGCTT 62.604 61.111 23.09 1.15 44.28 3.91
4987 11101 0.587285 GACGACGATCCGTAGCTCAT 59.413 55.000 0.00 0.00 43.49 2.90
5393 11549 2.042831 GGCTGCAAGAACGGCATCT 61.043 57.895 0.50 0.00 44.09 2.90
5395 11551 3.434319 CGGCTGCAAGAACGGCAT 61.434 61.111 0.50 0.00 44.09 4.40
5398 11554 3.777925 CGACGGCTGCAAGAACGG 61.778 66.667 0.50 0.00 39.62 4.44
5438 11597 0.674895 GGTGGAAGCAGTAGCACTGG 60.675 60.000 15.16 1.78 46.01 4.00
5483 11644 9.593134 ACTCACAATCTTCAGCTAACTAATTAG 57.407 33.333 11.05 11.05 40.83 1.73
5504 11670 9.906660 TCAAATTAATCCATAAACACAACTCAC 57.093 29.630 0.00 0.00 0.00 3.51
5572 11743 7.165318 GTGAATGATGAATCAATCGACACATTG 59.835 37.037 0.00 0.00 39.09 2.82
5627 11801 3.181510 CCACGTTTGCTATTAGCTTGTCC 60.182 47.826 16.29 0.54 42.97 4.02
5640 11814 9.176181 CCATATATAAAATACAACCACGTTTGC 57.824 33.333 0.00 0.00 0.00 3.68
5641 11815 9.672086 CCCATATATAAAATACAACCACGTTTG 57.328 33.333 0.00 0.00 0.00 2.93
5643 11817 8.983702 ACCCATATATAAAATACAACCACGTT 57.016 30.769 0.00 0.00 0.00 3.99
5644 11818 8.212312 TGACCCATATATAAAATACAACCACGT 58.788 33.333 0.00 0.00 0.00 4.49
5645 11819 8.610248 TGACCCATATATAAAATACAACCACG 57.390 34.615 0.00 0.00 0.00 4.94
5646 11820 8.512138 GCTGACCCATATATAAAATACAACCAC 58.488 37.037 0.00 0.00 0.00 4.16
5647 11821 8.221251 TGCTGACCCATATATAAAATACAACCA 58.779 33.333 0.00 0.00 0.00 3.67
5648 11822 8.630054 TGCTGACCCATATATAAAATACAACC 57.370 34.615 0.00 0.00 0.00 3.77
5649 11823 9.502091 TCTGCTGACCCATATATAAAATACAAC 57.498 33.333 0.00 0.00 0.00 3.32
5655 11829 8.494433 ACTTCTTCTGCTGACCCATATATAAAA 58.506 33.333 0.00 0.00 0.00 1.52
5656 11830 7.933577 CACTTCTTCTGCTGACCCATATATAAA 59.066 37.037 0.00 0.00 0.00 1.40
5657 11831 7.071196 ACACTTCTTCTGCTGACCCATATATAA 59.929 37.037 0.00 0.00 0.00 0.98
5660 11834 4.716784 ACACTTCTTCTGCTGACCCATATA 59.283 41.667 0.00 0.00 0.00 0.86
5661 11835 3.521126 ACACTTCTTCTGCTGACCCATAT 59.479 43.478 0.00 0.00 0.00 1.78
5662 11836 2.906389 ACACTTCTTCTGCTGACCCATA 59.094 45.455 0.00 0.00 0.00 2.74
5664 11838 1.131638 ACACTTCTTCTGCTGACCCA 58.868 50.000 0.00 0.00 0.00 4.51
5665 11839 1.876156 CAACACTTCTTCTGCTGACCC 59.124 52.381 0.00 0.00 0.00 4.46
5666 11840 2.289002 CACAACACTTCTTCTGCTGACC 59.711 50.000 0.00 0.00 0.00 4.02
5667 11841 3.198068 TCACAACACTTCTTCTGCTGAC 58.802 45.455 0.00 0.00 0.00 3.51
5669 11843 3.624861 AGTTCACAACACTTCTTCTGCTG 59.375 43.478 0.00 0.00 0.00 4.41
5671 11845 3.623060 TCAGTTCACAACACTTCTTCTGC 59.377 43.478 0.00 0.00 0.00 4.26
5673 11847 6.817765 TTTTCAGTTCACAACACTTCTTCT 57.182 33.333 0.00 0.00 0.00 2.85
5674 11848 7.250569 TCATTTTCAGTTCACAACACTTCTTC 58.749 34.615 0.00 0.00 0.00 2.87
5675 11849 7.156876 TCATTTTCAGTTCACAACACTTCTT 57.843 32.000 0.00 0.00 0.00 2.52
5676 11850 6.757897 TCATTTTCAGTTCACAACACTTCT 57.242 33.333 0.00 0.00 0.00 2.85
5677 11851 8.128582 TGTATCATTTTCAGTTCACAACACTTC 58.871 33.333 0.00 0.00 0.00 3.01
5678 11852 7.995289 TGTATCATTTTCAGTTCACAACACTT 58.005 30.769 0.00 0.00 0.00 3.16
5679 11853 7.566760 TGTATCATTTTCAGTTCACAACACT 57.433 32.000 0.00 0.00 0.00 3.55
5680 11854 8.075574 TCATGTATCATTTTCAGTTCACAACAC 58.924 33.333 0.00 0.00 0.00 3.32
5681 11855 8.164058 TCATGTATCATTTTCAGTTCACAACA 57.836 30.769 0.00 0.00 0.00 3.33
5684 11858 8.615211 GCTATCATGTATCATTTTCAGTTCACA 58.385 33.333 0.00 0.00 0.00 3.58
5685 11859 7.795734 CGCTATCATGTATCATTTTCAGTTCAC 59.204 37.037 0.00 0.00 0.00 3.18
5686 11860 7.518848 GCGCTATCATGTATCATTTTCAGTTCA 60.519 37.037 0.00 0.00 0.00 3.18
5688 11862 6.260714 TGCGCTATCATGTATCATTTTCAGTT 59.739 34.615 9.73 0.00 0.00 3.16
5689 11863 5.759763 TGCGCTATCATGTATCATTTTCAGT 59.240 36.000 9.73 0.00 0.00 3.41
5690 11864 6.232139 TGCGCTATCATGTATCATTTTCAG 57.768 37.500 9.73 0.00 0.00 3.02
5691 11865 6.616774 TTGCGCTATCATGTATCATTTTCA 57.383 33.333 9.73 0.00 0.00 2.69
5692 11866 9.778993 ATTATTGCGCTATCATGTATCATTTTC 57.221 29.630 9.73 0.00 0.00 2.29
5696 11870 9.605275 ACTAATTATTGCGCTATCATGTATCAT 57.395 29.630 9.73 0.00 0.00 2.45
5698 11872 8.543774 GGACTAATTATTGCGCTATCATGTATC 58.456 37.037 9.73 1.97 0.00 2.24
5699 11873 7.222805 CGGACTAATTATTGCGCTATCATGTAT 59.777 37.037 9.73 0.00 0.00 2.29
5701 11875 5.348724 CGGACTAATTATTGCGCTATCATGT 59.651 40.000 9.73 0.00 0.00 3.21
5703 11877 5.479306 ACGGACTAATTATTGCGCTATCAT 58.521 37.500 15.01 0.00 0.00 2.45
5706 11880 5.178809 GGAAACGGACTAATTATTGCGCTAT 59.821 40.000 15.01 9.73 0.00 2.97
5708 11882 3.311596 GGAAACGGACTAATTATTGCGCT 59.688 43.478 15.01 2.14 0.00 5.92
5709 11883 3.547413 GGGAAACGGACTAATTATTGCGC 60.547 47.826 15.01 0.00 0.00 6.09
5710 11884 3.623960 TGGGAAACGGACTAATTATTGCG 59.376 43.478 13.80 13.80 0.00 4.85
5711 11885 5.570234 TTGGGAAACGGACTAATTATTGC 57.430 39.130 0.00 0.00 0.00 3.56
5713 11887 8.411991 TTTCTTTGGGAAACGGACTAATTATT 57.588 30.769 0.00 0.00 38.81 1.40
5714 11888 8.589701 ATTTCTTTGGGAAACGGACTAATTAT 57.410 30.769 0.00 0.00 45.29 1.28
5715 11889 9.517868 TTATTTCTTTGGGAAACGGACTAATTA 57.482 29.630 0.00 0.00 45.29 1.40
5716 11890 6.911250 ATTTCTTTGGGAAACGGACTAATT 57.089 33.333 0.00 0.00 45.29 1.40
5717 11891 7.449086 TGTTATTTCTTTGGGAAACGGACTAAT 59.551 33.333 0.00 0.00 45.29 1.73
5719 11893 6.297582 TGTTATTTCTTTGGGAAACGGACTA 58.702 36.000 0.00 0.00 45.29 2.59
5722 11896 4.521256 CCTGTTATTTCTTTGGGAAACGGA 59.479 41.667 0.00 0.00 45.29 4.69
5723 11897 4.805219 CCTGTTATTTCTTTGGGAAACGG 58.195 43.478 0.00 0.00 45.29 4.44
5724 11898 4.234574 GCCTGTTATTTCTTTGGGAAACG 58.765 43.478 0.00 0.00 45.29 3.60
5725 11899 5.208463 TGCCTGTTATTTCTTTGGGAAAC 57.792 39.130 0.00 0.00 45.29 2.78
5726 11900 5.878406 TTGCCTGTTATTTCTTTGGGAAA 57.122 34.783 0.00 0.00 46.33 3.13
5727 11901 5.878406 TTTGCCTGTTATTTCTTTGGGAA 57.122 34.783 0.00 0.00 0.00 3.97
5728 11902 5.878406 TTTTGCCTGTTATTTCTTTGGGA 57.122 34.783 0.00 0.00 0.00 4.37
5729 11903 8.503196 GTTATTTTTGCCTGTTATTTCTTTGGG 58.497 33.333 0.00 0.00 0.00 4.12
5730 11904 9.271828 AGTTATTTTTGCCTGTTATTTCTTTGG 57.728 29.630 0.00 0.00 0.00 3.28
5741 11915 9.860898 GATCTGAATTTAGTTATTTTTGCCTGT 57.139 29.630 0.00 0.00 0.00 4.00
5744 11918 9.521503 GGAGATCTGAATTTAGTTATTTTTGCC 57.478 33.333 0.00 0.00 0.00 4.52
5757 11931 6.388100 TCTGGAGGTAATGGAGATCTGAATTT 59.612 38.462 0.00 0.00 0.00 1.82
5849 12027 5.566032 GCACTTGGTCTGTATACTGTACACA 60.566 44.000 4.17 0.00 0.00 3.72
5861 12039 1.067516 GTTTGCATGCACTTGGTCTGT 59.932 47.619 22.58 0.00 0.00 3.41
5971 12178 1.976474 GGATTTGGGTCAGGCGCAA 60.976 57.895 10.83 0.00 46.29 4.85
5981 12188 2.232208 GCACCTTCAAAGAGGATTTGGG 59.768 50.000 0.00 0.00 39.25 4.12
5996 12203 1.075374 TGAAGCCATGGTAAGCACCTT 59.925 47.619 14.67 5.90 45.98 3.50
6007 12214 3.264947 TCTCTCGACATTTGAAGCCATG 58.735 45.455 0.00 0.00 0.00 3.66
6022 12229 1.684386 AATCCCAGGCAGCTCTCTCG 61.684 60.000 0.00 0.00 0.00 4.04
6029 12236 1.067354 CAAGTGAAAATCCCAGGCAGC 60.067 52.381 0.00 0.00 0.00 5.25
6109 12316 0.610687 AACCTGAAGAGGAGCCTTCG 59.389 55.000 0.00 0.00 44.06 3.79
6164 12371 8.993121 CATAGATTAGTGACACCATTGTAATCC 58.007 37.037 15.58 4.62 35.47 3.01
6170 12377 6.682423 TTGCATAGATTAGTGACACCATTG 57.318 37.500 0.84 0.00 0.00 2.82
6188 12395 3.818210 TGTCCGTTATTGACACTTTGCAT 59.182 39.130 0.00 0.00 37.80 3.96
6195 12402 2.413837 AGTGCTGTCCGTTATTGACAC 58.586 47.619 0.00 0.00 37.80 3.67
6199 12410 2.348666 GTGCTAGTGCTGTCCGTTATTG 59.651 50.000 0.00 0.00 40.48 1.90
6203 12414 0.393077 AAGTGCTAGTGCTGTCCGTT 59.607 50.000 0.00 0.00 40.48 4.44
6205 12416 0.038251 TCAAGTGCTAGTGCTGTCCG 60.038 55.000 0.00 0.00 40.48 4.79
6233 12444 3.681593 TCTGGAAAACCCATTTGCATG 57.318 42.857 0.00 0.00 46.48 4.06
6234 12445 3.554752 CGTTCTGGAAAACCCATTTGCAT 60.555 43.478 0.00 0.00 46.48 3.96
6333 12544 6.537453 AACAGCTGACACTCTATACAAGAT 57.463 37.500 23.35 0.00 32.41 2.40
6374 12585 1.581934 ACATTGTGTGTCTGACCACG 58.418 50.000 18.17 10.66 35.77 4.94
6383 12594 4.828939 AGGAATCATTGTGACATTGTGTGT 59.171 37.500 7.27 0.00 45.83 3.72
6417 12628 1.815003 CACCCAAGAGCCAACTGATTC 59.185 52.381 0.00 0.00 0.00 2.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.