Multiple sequence alignment - TraesCS4A01G394700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G394700 chr4A 100.000 3895 0 0 1 3895 669828252 669832146 0.000000e+00 7193.0
1 TraesCS4A01G394700 chr7D 86.211 1668 121 38 227 1816 54245306 54246942 0.000000e+00 1705.0
2 TraesCS4A01G394700 chr7D 91.076 874 71 3 2149 3015 54247465 54248338 0.000000e+00 1175.0
3 TraesCS4A01G394700 chr7D 88.722 266 25 3 3019 3280 398716062 398716326 1.750000e-83 320.0
4 TraesCS4A01G394700 chr7D 87.266 267 29 2 3017 3280 418546630 418546366 2.270000e-77 300.0
5 TraesCS4A01G394700 chr7D 93.532 201 11 2 1 201 54245038 54245236 8.180000e-77 298.0
6 TraesCS4A01G394700 chr7D 76.441 590 115 16 1104 1686 54370922 54370350 8.180000e-77 298.0
7 TraesCS4A01G394700 chr7D 94.000 50 3 0 3280 3329 22981323 22981372 4.170000e-10 76.8
8 TraesCS4A01G394700 chr7D 100.000 31 0 0 756 786 54245761 54245791 1.510000e-04 58.4
9 TraesCS4A01G394700 chr4B 97.403 616 14 1 3280 3895 665449477 665450090 0.000000e+00 1048.0
10 TraesCS4A01G394700 chr4B 90.476 609 36 8 3281 3889 646151433 646152019 0.000000e+00 784.0
11 TraesCS4A01G394700 chr4B 87.313 268 29 3 3017 3280 92958016 92957750 6.320000e-78 302.0
12 TraesCS4A01G394700 chr4B 83.007 306 36 13 227 532 73496461 73496172 2.980000e-66 263.0
13 TraesCS4A01G394700 chr2B 96.278 618 22 1 3279 3895 374687470 374688087 0.000000e+00 1013.0
14 TraesCS4A01G394700 chr1A 93.369 558 26 4 3279 3832 314477618 314477068 0.000000e+00 815.0
15 TraesCS4A01G394700 chr3D 88.493 617 64 4 3279 3895 231960477 231959868 0.000000e+00 739.0
16 TraesCS4A01G394700 chr3D 83.696 92 11 3 242 333 172347028 172346941 2.490000e-12 84.2
17 TraesCS4A01G394700 chr7A 88.814 590 45 9 970 1541 57798788 57799374 0.000000e+00 704.0
18 TraesCS4A01G394700 chr7A 95.517 290 12 1 3607 3895 569325639 569325928 2.740000e-126 462.0
19 TraesCS4A01G394700 chr7A 94.982 279 9 1 3278 3556 569325368 569325641 2.150000e-117 433.0
20 TraesCS4A01G394700 chr7A 77.066 593 108 20 1104 1686 57886626 57886052 2.260000e-82 316.0
21 TraesCS4A01G394700 chr7A 86.716 271 30 4 3015 3280 536978298 536978029 2.940000e-76 296.0
22 TraesCS4A01G394700 chr7A 75.000 460 58 18 351 764 57798168 57798616 4.030000e-35 159.0
23 TraesCS4A01G394700 chr7A 100.000 31 0 0 756 786 57798509 57798539 1.510000e-04 58.4
24 TraesCS4A01G394700 chr6D 90.389 437 16 7 3460 3895 2953745 2953334 5.690000e-153 551.0
25 TraesCS4A01G394700 chr6D 87.361 269 29 3 3016 3280 334161166 334161433 1.760000e-78 303.0
26 TraesCS4A01G394700 chr6D 92.982 171 9 1 3294 3461 2955176 2955006 3.010000e-61 246.0
27 TraesCS4A01G394700 chr3A 87.288 354 33 7 3542 3884 16230509 16230157 1.010000e-105 394.0
28 TraesCS4A01G394700 chr6B 88.803 259 24 3 3026 3280 684141127 684141384 2.920000e-81 313.0
29 TraesCS4A01G394700 chr7B 87.687 268 27 4 3017 3280 8934245 8934510 1.360000e-79 307.0
30 TraesCS4A01G394700 chr7B 87.687 268 28 3 3017 3280 745408516 745408250 1.360000e-79 307.0
31 TraesCS4A01G394700 chr7B 82.759 87 8 6 246 332 747964415 747964336 1.940000e-08 71.3
32 TraesCS4A01G394700 chr1B 86.282 277 31 5 3012 3284 518811033 518811306 1.060000e-75 294.0
33 TraesCS4A01G394700 chrUn 82.143 364 27 14 3542 3895 89939539 89939874 1.070000e-70 278.0
34 TraesCS4A01G394700 chrUn 94.000 50 3 0 3280 3329 89939448 89939497 4.170000e-10 76.8
35 TraesCS4A01G394700 chr5B 100.000 29 0 0 559 587 35046620 35046648 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G394700 chr4A 669828252 669832146 3894 False 7193.000000 7193 100.00000 1 3895 1 chr4A.!!$F1 3894
1 TraesCS4A01G394700 chr7D 54245038 54248338 3300 False 809.100000 1705 92.70475 1 3015 4 chr7D.!!$F3 3014
2 TraesCS4A01G394700 chr7D 54370350 54370922 572 True 298.000000 298 76.44100 1104 1686 1 chr7D.!!$R1 582
3 TraesCS4A01G394700 chr4B 665449477 665450090 613 False 1048.000000 1048 97.40300 3280 3895 1 chr4B.!!$F2 615
4 TraesCS4A01G394700 chr4B 646151433 646152019 586 False 784.000000 784 90.47600 3281 3889 1 chr4B.!!$F1 608
5 TraesCS4A01G394700 chr2B 374687470 374688087 617 False 1013.000000 1013 96.27800 3279 3895 1 chr2B.!!$F1 616
6 TraesCS4A01G394700 chr1A 314477068 314477618 550 True 815.000000 815 93.36900 3279 3832 1 chr1A.!!$R1 553
7 TraesCS4A01G394700 chr3D 231959868 231960477 609 True 739.000000 739 88.49300 3279 3895 1 chr3D.!!$R2 616
8 TraesCS4A01G394700 chr7A 569325368 569325928 560 False 447.500000 462 95.24950 3278 3895 2 chr7A.!!$F2 617
9 TraesCS4A01G394700 chr7A 57886052 57886626 574 True 316.000000 316 77.06600 1104 1686 1 chr7A.!!$R1 582
10 TraesCS4A01G394700 chr7A 57798168 57799374 1206 False 307.133333 704 87.93800 351 1541 3 chr7A.!!$F1 1190
11 TraesCS4A01G394700 chr6D 2953334 2955176 1842 True 398.500000 551 91.68550 3294 3895 2 chr6D.!!$R1 601

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
339 381 0.232303 GTTCACTGCTTTCGGTGTCG 59.768 55.0 4.43 0.00 46.95 4.35 F
1704 1890 0.104120 TCACCGTCTGGATATTGCGG 59.896 55.0 0.00 0.00 46.83 5.69 F
1874 2288 0.039256 TTTTCTTGCCGAGCATGCAC 60.039 50.0 21.98 13.43 38.76 4.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1855 2269 0.039256 GTGCATGCTCGGCAAGAAAA 60.039 50.000 20.33 0.0 43.62 2.29 R
2705 3247 0.324091 ACCCGAAGTCCGTCTGGTAT 60.324 55.000 0.00 0.0 36.31 2.73 R
3442 3991 1.073763 TGTGGTGTGATCCCTCCAAAG 59.926 52.381 0.24 0.0 0.00 2.77 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 4.142271 ACAACTCATTCCTCGATCTCAGAC 60.142 45.833 0.00 0.00 0.00 3.51
42 43 2.733590 TCAGACGGAACTGAGCTGT 58.266 52.632 0.00 0.00 41.21 4.40
80 81 0.512952 GTAACGAGCAGCCAACACTG 59.487 55.000 0.00 0.00 40.80 3.66
82 83 0.250467 AACGAGCAGCCAACACTGAT 60.250 50.000 0.00 0.00 40.25 2.90
261 303 7.273188 TCGTGAGAAAATACATTACTTCGTG 57.727 36.000 0.00 0.00 37.03 4.35
333 375 1.665679 ACACACTGTTCACTGCTTTCG 59.334 47.619 0.00 0.00 0.00 3.46
334 376 1.003545 CACACTGTTCACTGCTTTCGG 60.004 52.381 0.00 0.00 0.00 4.30
339 381 0.232303 GTTCACTGCTTTCGGTGTCG 59.768 55.000 4.43 0.00 46.95 4.35
348 390 1.001815 CTTTCGGTGTCGGCAATTTGT 60.002 47.619 0.00 0.00 36.95 2.83
349 391 1.880271 TTCGGTGTCGGCAATTTGTA 58.120 45.000 0.00 0.00 36.95 2.41
377 419 2.161012 GTGTGGCTCTCATGTCAATGTG 59.839 50.000 0.00 0.00 35.15 3.21
381 423 3.890756 TGGCTCTCATGTCAATGTGTTTT 59.109 39.130 0.00 0.00 35.15 2.43
390 432 7.100829 CATGTCAATGTGTTTTGTCATGAAG 57.899 36.000 14.83 0.00 46.65 3.02
431 473 5.614308 ACACATCCATATGATACTGTGGTG 58.386 41.667 20.71 12.95 36.54 4.17
461 503 8.614346 TCTTTTTCAGAAAATTTGAAGCATTGG 58.386 29.630 9.19 0.00 36.07 3.16
480 522 9.118300 AGCATTGGAACATTTGTTTTGATTTTA 57.882 25.926 0.00 0.00 39.30 1.52
508 551 4.647424 TTTTTGAAACGAGCTCCATGTT 57.353 36.364 8.47 3.77 0.00 2.71
510 553 2.542020 TGAAACGAGCTCCATGTTGA 57.458 45.000 8.47 0.00 0.00 3.18
513 556 2.768253 AACGAGCTCCATGTTGATCA 57.232 45.000 8.47 0.00 0.00 2.92
544 587 2.288666 TGAATTTCCATGCCTAGACGC 58.711 47.619 0.00 0.00 0.00 5.19
545 588 2.288666 GAATTTCCATGCCTAGACGCA 58.711 47.619 0.00 0.00 44.35 5.24
546 589 1.668419 ATTTCCATGCCTAGACGCAC 58.332 50.000 0.00 0.00 42.70 5.34
547 590 0.392461 TTTCCATGCCTAGACGCACC 60.392 55.000 0.00 0.00 42.70 5.01
548 591 2.203070 CCATGCCTAGACGCACCC 60.203 66.667 0.00 0.00 42.70 4.61
553 596 0.887387 TGCCTAGACGCACCCAAAAC 60.887 55.000 0.00 0.00 32.62 2.43
564 626 1.126113 CACCCAAAACGACGAGATTCG 59.874 52.381 0.00 0.00 46.93 3.34
608 670 1.312815 ACAGACAACAAGCTTGGAGC 58.687 50.000 29.18 15.44 42.84 4.70
624 686 5.872070 GCTTGGAGCTATGGATAGATACAAC 59.128 44.000 5.61 1.29 42.76 3.32
653 738 1.137404 CGGCAATTTTGGAGCTCCG 59.863 57.895 27.43 13.18 39.43 4.63
712 802 2.408704 CGGACAGCGAAGACAAACTTAG 59.591 50.000 0.00 0.00 39.13 2.18
777 871 4.746951 CATGCACACACGCGGCAG 62.747 66.667 12.47 1.86 41.40 4.85
778 872 4.986645 ATGCACACACGCGGCAGA 62.987 61.111 12.47 0.00 41.40 4.26
782 876 4.908687 ACACACGCGGCAGAGCAA 62.909 61.111 12.47 0.00 36.85 3.91
783 877 4.081030 CACACGCGGCAGAGCAAG 62.081 66.667 12.47 0.00 36.85 4.01
800 894 3.706086 AGCAAGGACCATTTTGTTTGTCT 59.294 39.130 0.00 0.00 0.00 3.41
887 1013 5.490159 TGAATGCATCTCAGTGTCATAACA 58.510 37.500 0.00 0.00 0.00 2.41
896 1029 7.939784 TCTCAGTGTCATAACATACTACAGT 57.060 36.000 0.00 0.00 37.81 3.55
953 1103 0.533032 GAGAGCTAGGCTTGGTTCGT 59.467 55.000 1.57 0.00 39.88 3.85
961 1111 1.595929 GCTTGGTTCGTTCGACCCA 60.596 57.895 7.36 7.36 36.30 4.51
967 1117 3.562779 TTCGTTCGACCCACCGCTC 62.563 63.158 0.00 0.00 0.00 5.03
972 1131 0.395311 TTCGACCCACCGCTCTAGAT 60.395 55.000 0.00 0.00 0.00 1.98
983 1142 1.406898 CGCTCTAGATCACCAGCTTCA 59.593 52.381 0.00 0.00 0.00 3.02
990 1150 2.170187 AGATCACCAGCTTCATCCTCAC 59.830 50.000 0.00 0.00 0.00 3.51
1064 1233 1.229625 TCCAGCCTGACCACCAGAT 60.230 57.895 0.00 0.00 45.78 2.90
1068 1237 0.546267 AGCCTGACCACCAGATCACT 60.546 55.000 0.00 0.00 45.78 3.41
1074 1243 4.023980 CTGACCACCAGATCACTAACCTA 58.976 47.826 0.00 0.00 45.78 3.08
1082 1251 1.041447 ATCACTAACCTACGGCCGCT 61.041 55.000 28.58 15.49 0.00 5.52
1225 1397 3.740495 CTCCGCTCCTCCCTGGCTA 62.740 68.421 0.00 0.00 35.26 3.93
1251 1423 2.584608 CCCGTCTTCATCCCGCTT 59.415 61.111 0.00 0.00 0.00 4.68
1577 1757 2.290641 AGTCGTTTTGGCAGTTCATGAC 59.709 45.455 0.00 0.00 37.50 3.06
1691 1877 2.995872 GCGAAGAGGAGCTCACCGT 61.996 63.158 17.19 4.34 32.98 4.83
1702 1888 1.202580 AGCTCACCGTCTGGATATTGC 60.203 52.381 0.00 0.00 39.21 3.56
1704 1890 0.104120 TCACCGTCTGGATATTGCGG 59.896 55.000 0.00 0.00 46.83 5.69
1707 1893 0.937304 CCGTCTGGATATTGCGGTTG 59.063 55.000 0.00 0.00 37.87 3.77
1747 1933 3.672767 CGGTAATTATCCGGCCTTACT 57.327 47.619 14.84 0.00 43.68 2.24
1763 1953 7.418254 CCGGCCTTACTTATTAGGAGTAGAAAA 60.418 40.741 0.00 0.00 33.13 2.29
1765 1955 9.848710 GGCCTTACTTATTAGGAGTAGAAAATT 57.151 33.333 0.00 0.00 33.13 1.82
1799 1989 9.713740 CATCTATCTAAAACAACTTGCTCAATC 57.286 33.333 0.00 0.00 0.00 2.67
1816 2006 8.109705 TGCTCAATCTTGCAGTCTAAAATTAA 57.890 30.769 0.00 0.00 34.84 1.40
1817 2007 8.575589 TGCTCAATCTTGCAGTCTAAAATTAAA 58.424 29.630 0.00 0.00 34.84 1.52
1818 2008 9.070149 GCTCAATCTTGCAGTCTAAAATTAAAG 57.930 33.333 0.00 0.00 0.00 1.85
1821 2011 9.897744 CAATCTTGCAGTCTAAAATTAAAGACA 57.102 29.630 17.69 2.15 43.74 3.41
1825 2015 9.736023 CTTGCAGTCTAAAATTAAAGACAAACT 57.264 29.630 17.69 0.44 43.74 2.66
1863 2277 9.677567 TTCTGTAGTTGTTGATATTTTTCTTGC 57.322 29.630 0.00 0.00 0.00 4.01
1864 2278 8.296713 TCTGTAGTTGTTGATATTTTTCTTGCC 58.703 33.333 0.00 0.00 0.00 4.52
1865 2279 7.081349 TGTAGTTGTTGATATTTTTCTTGCCG 58.919 34.615 0.00 0.00 0.00 5.69
1866 2280 6.325919 AGTTGTTGATATTTTTCTTGCCGA 57.674 33.333 0.00 0.00 0.00 5.54
1868 2282 4.732784 TGTTGATATTTTTCTTGCCGAGC 58.267 39.130 0.00 0.00 0.00 5.03
1869 2283 4.217334 TGTTGATATTTTTCTTGCCGAGCA 59.783 37.500 0.00 0.00 36.47 4.26
1870 2284 5.105797 TGTTGATATTTTTCTTGCCGAGCAT 60.106 36.000 0.00 0.00 38.76 3.79
1872 2286 2.000429 ATTTTTCTTGCCGAGCATGC 58.000 45.000 10.51 10.51 38.76 4.06
1874 2288 0.039256 TTTTCTTGCCGAGCATGCAC 60.039 50.000 21.98 13.43 38.76 4.57
1875 2289 1.171549 TTTCTTGCCGAGCATGCACA 61.172 50.000 21.98 9.53 38.76 4.57
1876 2290 1.855213 TTCTTGCCGAGCATGCACAC 61.855 55.000 21.98 9.29 38.76 3.82
1877 2291 2.594013 TTGCCGAGCATGCACACA 60.594 55.556 21.98 11.96 38.76 3.72
1878 2292 2.791396 CTTGCCGAGCATGCACACAC 62.791 60.000 21.98 6.28 38.76 3.82
1879 2293 4.450122 GCCGAGCATGCACACACG 62.450 66.667 21.98 15.72 0.00 4.49
1880 2294 4.450122 CCGAGCATGCACACACGC 62.450 66.667 21.98 0.00 0.00 5.34
1881 2295 4.782116 CGAGCATGCACACACGCG 62.782 66.667 21.98 3.53 33.35 6.01
1882 2296 4.450122 GAGCATGCACACACGCGG 62.450 66.667 21.98 1.27 33.35 6.46
1888 2302 3.202001 GCACACACGCGGCCATAT 61.202 61.111 12.47 0.00 0.00 1.78
1889 2303 2.708865 CACACACGCGGCCATATG 59.291 61.111 12.47 0.00 0.00 1.78
1890 2304 2.513666 ACACACGCGGCCATATGG 60.514 61.111 18.07 18.07 38.53 2.74
1891 2305 2.203001 CACACGCGGCCATATGGA 60.203 61.111 26.47 0.00 37.39 3.41
1894 2308 0.884704 ACACGCGGCCATATGGATTC 60.885 55.000 26.47 12.32 37.39 2.52
1895 2309 0.884259 CACGCGGCCATATGGATTCA 60.884 55.000 26.47 0.00 37.39 2.57
1896 2310 0.603707 ACGCGGCCATATGGATTCAG 60.604 55.000 26.47 13.46 37.39 3.02
1897 2311 1.878775 GCGGCCATATGGATTCAGC 59.121 57.895 26.47 15.54 37.39 4.26
1898 2312 0.607489 GCGGCCATATGGATTCAGCT 60.607 55.000 26.47 0.00 37.39 4.24
1899 2313 1.901591 CGGCCATATGGATTCAGCTT 58.098 50.000 26.47 0.00 37.39 3.74
1901 2315 2.030540 CGGCCATATGGATTCAGCTTTG 60.031 50.000 26.47 0.11 37.39 2.77
1902 2316 2.288640 GGCCATATGGATTCAGCTTTGC 60.289 50.000 26.47 4.83 37.39 3.68
1903 2317 2.363038 GCCATATGGATTCAGCTTTGCA 59.637 45.455 26.47 0.00 37.39 4.08
1904 2318 3.797865 GCCATATGGATTCAGCTTTGCAC 60.798 47.826 26.47 0.00 37.39 4.57
1905 2319 3.243636 CCATATGGATTCAGCTTTGCACC 60.244 47.826 17.49 0.00 37.39 5.01
1906 2320 0.813184 ATGGATTCAGCTTTGCACCG 59.187 50.000 0.00 0.00 0.00 4.94
1907 2321 0.537143 TGGATTCAGCTTTGCACCGT 60.537 50.000 0.00 0.00 0.00 4.83
1908 2322 0.598065 GGATTCAGCTTTGCACCGTT 59.402 50.000 0.00 0.00 0.00 4.44
1909 2323 1.000274 GGATTCAGCTTTGCACCGTTT 60.000 47.619 0.00 0.00 0.00 3.60
1910 2324 2.053627 GATTCAGCTTTGCACCGTTTG 58.946 47.619 0.00 0.00 0.00 2.93
1911 2325 0.102120 TTCAGCTTTGCACCGTTTGG 59.898 50.000 0.00 0.00 42.84 3.28
1912 2326 1.950630 CAGCTTTGCACCGTTTGGC 60.951 57.895 0.00 0.00 39.70 4.52
1913 2327 2.127232 AGCTTTGCACCGTTTGGCT 61.127 52.632 0.00 0.00 39.70 4.75
1914 2328 1.227234 GCTTTGCACCGTTTGGCTT 60.227 52.632 0.00 0.00 39.70 4.35
1915 2329 0.809636 GCTTTGCACCGTTTGGCTTT 60.810 50.000 0.00 0.00 39.70 3.51
1916 2330 0.929615 CTTTGCACCGTTTGGCTTTG 59.070 50.000 0.00 0.00 39.70 2.77
1917 2331 1.086634 TTTGCACCGTTTGGCTTTGC 61.087 50.000 0.00 0.00 39.70 3.68
1918 2332 3.029735 GCACCGTTTGGCTTTGCG 61.030 61.111 0.00 0.00 39.70 4.85
1919 2333 3.029735 CACCGTTTGGCTTTGCGC 61.030 61.111 0.00 0.00 39.70 6.09
1920 2334 4.622456 ACCGTTTGGCTTTGCGCG 62.622 61.111 0.00 0.00 40.44 6.86
1921 2335 4.320928 CCGTTTGGCTTTGCGCGA 62.321 61.111 12.10 0.00 40.44 5.87
1922 2336 2.352915 CGTTTGGCTTTGCGCGAA 60.353 55.556 12.10 10.26 40.44 4.70
1923 2337 1.941734 CGTTTGGCTTTGCGCGAAA 60.942 52.632 12.10 0.74 42.85 3.46
1924 2338 1.274798 CGTTTGGCTTTGCGCGAAAT 61.275 50.000 12.10 0.00 45.83 2.17
1925 2339 0.434628 GTTTGGCTTTGCGCGAAATC 59.565 50.000 12.10 7.07 45.83 2.17
1926 2340 0.665972 TTTGGCTTTGCGCGAAATCC 60.666 50.000 12.10 15.16 40.69 3.01
1927 2341 1.523154 TTGGCTTTGCGCGAAATCCT 61.523 50.000 21.94 0.00 40.44 3.24
1928 2342 1.212751 GGCTTTGCGCGAAATCCTT 59.787 52.632 12.10 0.00 40.44 3.36
1929 2343 0.450184 GGCTTTGCGCGAAATCCTTA 59.550 50.000 12.10 0.00 40.44 2.69
1930 2344 1.065551 GGCTTTGCGCGAAATCCTTAT 59.934 47.619 12.10 0.00 40.44 1.73
1931 2345 2.111756 GCTTTGCGCGAAATCCTTATG 58.888 47.619 12.10 0.00 0.00 1.90
1932 2346 2.477863 GCTTTGCGCGAAATCCTTATGT 60.478 45.455 12.10 0.00 0.00 2.29
1933 2347 3.354397 CTTTGCGCGAAATCCTTATGTC 58.646 45.455 12.10 0.00 0.00 3.06
1934 2348 2.309528 TGCGCGAAATCCTTATGTCT 57.690 45.000 12.10 0.00 0.00 3.41
1935 2349 2.627945 TGCGCGAAATCCTTATGTCTT 58.372 42.857 12.10 0.00 0.00 3.01
1936 2350 3.787785 TGCGCGAAATCCTTATGTCTTA 58.212 40.909 12.10 0.00 0.00 2.10
1937 2351 4.185394 TGCGCGAAATCCTTATGTCTTAA 58.815 39.130 12.10 0.00 0.00 1.85
1938 2352 4.632251 TGCGCGAAATCCTTATGTCTTAAA 59.368 37.500 12.10 0.00 0.00 1.52
1939 2353 4.962151 GCGCGAAATCCTTATGTCTTAAAC 59.038 41.667 12.10 0.00 0.00 2.01
1940 2354 5.446741 GCGCGAAATCCTTATGTCTTAAACA 60.447 40.000 12.10 0.00 43.51 2.83
1941 2355 6.539324 CGCGAAATCCTTATGTCTTAAACAA 58.461 36.000 0.00 0.00 42.37 2.83
1942 2356 6.682863 CGCGAAATCCTTATGTCTTAAACAAG 59.317 38.462 0.00 0.00 42.37 3.16
1943 2357 6.967199 GCGAAATCCTTATGTCTTAAACAAGG 59.033 38.462 0.00 0.00 42.37 3.61
1944 2358 7.148306 GCGAAATCCTTATGTCTTAAACAAGGA 60.148 37.037 3.99 3.99 44.99 3.36
1945 2359 8.391106 CGAAATCCTTATGTCTTAAACAAGGAG 58.609 37.037 7.38 5.35 44.42 3.69
1946 2360 9.449719 GAAATCCTTATGTCTTAAACAAGGAGA 57.550 33.333 7.38 0.00 44.42 3.71
1947 2361 9.454859 AAATCCTTATGTCTTAAACAAGGAGAG 57.545 33.333 7.38 0.00 44.42 3.20
1948 2362 7.792364 TCCTTATGTCTTAAACAAGGAGAGA 57.208 36.000 0.00 0.00 39.13 3.10
1949 2363 7.841956 TCCTTATGTCTTAAACAAGGAGAGAG 58.158 38.462 0.00 0.00 39.13 3.20
1950 2364 7.455008 TCCTTATGTCTTAAACAAGGAGAGAGT 59.545 37.037 0.00 0.00 39.13 3.24
1951 2365 8.097662 CCTTATGTCTTAAACAAGGAGAGAGTT 58.902 37.037 0.00 0.00 42.37 3.01
1952 2366 9.145865 CTTATGTCTTAAACAAGGAGAGAGTTC 57.854 37.037 0.00 0.00 42.37 3.01
1953 2367 5.855045 TGTCTTAAACAAGGAGAGAGTTCC 58.145 41.667 0.00 0.00 34.03 3.62
1954 2368 5.365605 TGTCTTAAACAAGGAGAGAGTTCCA 59.634 40.000 0.00 0.00 34.58 3.53
1955 2369 6.043243 TGTCTTAAACAAGGAGAGAGTTCCAT 59.957 38.462 0.00 0.00 34.58 3.41
1956 2370 6.937465 GTCTTAAACAAGGAGAGAGTTCCATT 59.063 38.462 0.00 0.00 39.84 3.16
1957 2371 7.445707 GTCTTAAACAAGGAGAGAGTTCCATTT 59.554 37.037 0.00 0.00 39.84 2.32
1958 2372 7.661847 TCTTAAACAAGGAGAGAGTTCCATTTC 59.338 37.037 0.00 0.00 39.84 2.17
1959 2373 5.574970 AACAAGGAGAGAGTTCCATTTCT 57.425 39.130 0.00 0.00 39.84 2.52
1960 2374 5.574970 ACAAGGAGAGAGTTCCATTTCTT 57.425 39.130 0.00 0.00 39.84 2.52
1961 2375 5.555966 ACAAGGAGAGAGTTCCATTTCTTC 58.444 41.667 0.00 0.00 39.84 2.87
1962 2376 5.072329 ACAAGGAGAGAGTTCCATTTCTTCA 59.928 40.000 0.00 0.00 39.84 3.02
1963 2377 6.179040 CAAGGAGAGAGTTCCATTTCTTCAT 58.821 40.000 0.00 0.00 39.84 2.57
1964 2378 7.038017 ACAAGGAGAGAGTTCCATTTCTTCATA 60.038 37.037 0.00 0.00 39.84 2.15
1965 2379 7.502060 AGGAGAGAGTTCCATTTCTTCATAA 57.498 36.000 0.00 0.00 39.84 1.90
1966 2380 7.922382 AGGAGAGAGTTCCATTTCTTCATAAA 58.078 34.615 0.00 0.00 39.84 1.40
1967 2381 8.386264 AGGAGAGAGTTCCATTTCTTCATAAAA 58.614 33.333 0.00 0.00 39.84 1.52
1968 2382 9.014297 GGAGAGAGTTCCATTTCTTCATAAAAA 57.986 33.333 0.00 0.00 37.20 1.94
1993 2407 7.865706 AATATGGTGTACAAGTTCTCAATCC 57.134 36.000 0.00 0.00 0.00 3.01
1994 2408 4.974645 TGGTGTACAAGTTCTCAATCCT 57.025 40.909 0.00 0.00 0.00 3.24
1995 2409 6.620877 ATGGTGTACAAGTTCTCAATCCTA 57.379 37.500 0.00 0.00 0.00 2.94
1996 2410 6.037786 TGGTGTACAAGTTCTCAATCCTAG 57.962 41.667 0.00 0.00 0.00 3.02
1997 2411 5.046591 TGGTGTACAAGTTCTCAATCCTAGG 60.047 44.000 0.82 0.82 0.00 3.02
1998 2412 5.046520 GGTGTACAAGTTCTCAATCCTAGGT 60.047 44.000 9.08 0.00 0.00 3.08
1999 2413 6.465084 GTGTACAAGTTCTCAATCCTAGGTT 58.535 40.000 9.08 0.00 0.00 3.50
2000 2414 7.310237 GGTGTACAAGTTCTCAATCCTAGGTTA 60.310 40.741 9.08 0.00 0.00 2.85
2001 2415 8.092687 GTGTACAAGTTCTCAATCCTAGGTTAA 58.907 37.037 9.08 0.00 0.00 2.01
2002 2416 8.653191 TGTACAAGTTCTCAATCCTAGGTTAAA 58.347 33.333 9.08 0.00 0.00 1.52
2003 2417 9.668497 GTACAAGTTCTCAATCCTAGGTTAAAT 57.332 33.333 9.08 0.00 0.00 1.40
2005 2419 9.588096 ACAAGTTCTCAATCCTAGGTTAAATTT 57.412 29.630 9.08 0.00 0.00 1.82
2006 2420 9.846248 CAAGTTCTCAATCCTAGGTTAAATTTG 57.154 33.333 9.08 5.96 0.00 2.32
2007 2421 9.588096 AAGTTCTCAATCCTAGGTTAAATTTGT 57.412 29.630 9.08 0.00 0.00 2.83
2008 2422 9.014297 AGTTCTCAATCCTAGGTTAAATTTGTG 57.986 33.333 9.08 6.02 0.00 3.33
2009 2423 8.793592 GTTCTCAATCCTAGGTTAAATTTGTGT 58.206 33.333 9.08 0.00 0.00 3.72
2010 2424 8.335532 TCTCAATCCTAGGTTAAATTTGTGTG 57.664 34.615 9.08 0.00 0.00 3.82
2011 2425 8.160765 TCTCAATCCTAGGTTAAATTTGTGTGA 58.839 33.333 9.08 0.00 0.00 3.58
2012 2426 8.698973 TCAATCCTAGGTTAAATTTGTGTGAA 57.301 30.769 9.08 0.00 0.00 3.18
2013 2427 8.792633 TCAATCCTAGGTTAAATTTGTGTGAAG 58.207 33.333 9.08 0.00 0.00 3.02
2014 2428 6.569179 TCCTAGGTTAAATTTGTGTGAAGC 57.431 37.500 9.08 0.00 0.00 3.86
2015 2429 5.475564 TCCTAGGTTAAATTTGTGTGAAGCC 59.524 40.000 9.08 0.00 0.00 4.35
2016 2430 5.242838 CCTAGGTTAAATTTGTGTGAAGCCA 59.757 40.000 0.00 0.00 0.00 4.75
2017 2431 5.806654 AGGTTAAATTTGTGTGAAGCCAT 57.193 34.783 0.00 0.00 0.00 4.40
2018 2432 6.173427 AGGTTAAATTTGTGTGAAGCCATT 57.827 33.333 0.00 0.00 0.00 3.16
2019 2433 6.591001 AGGTTAAATTTGTGTGAAGCCATTT 58.409 32.000 0.00 0.00 0.00 2.32
2020 2434 6.482973 AGGTTAAATTTGTGTGAAGCCATTTG 59.517 34.615 0.00 0.00 0.00 2.32
2021 2435 6.481644 GGTTAAATTTGTGTGAAGCCATTTGA 59.518 34.615 0.00 0.00 0.00 2.69
2022 2436 7.011857 GGTTAAATTTGTGTGAAGCCATTTGAA 59.988 33.333 0.00 0.00 0.00 2.69
2023 2437 6.998968 AAATTTGTGTGAAGCCATTTGAAA 57.001 29.167 0.00 0.00 0.00 2.69
2024 2438 5.989551 ATTTGTGTGAAGCCATTTGAAAC 57.010 34.783 0.00 0.00 0.00 2.78
2025 2439 3.451141 TGTGTGAAGCCATTTGAAACC 57.549 42.857 0.00 0.00 0.00 3.27
2026 2440 2.762887 TGTGTGAAGCCATTTGAAACCA 59.237 40.909 0.00 0.00 0.00 3.67
2027 2441 3.196469 TGTGTGAAGCCATTTGAAACCAA 59.804 39.130 0.00 0.00 0.00 3.67
2028 2442 4.141756 TGTGTGAAGCCATTTGAAACCAAT 60.142 37.500 0.00 0.00 0.00 3.16
2029 2443 4.448732 GTGTGAAGCCATTTGAAACCAATC 59.551 41.667 0.00 0.00 0.00 2.67
2030 2444 4.344679 TGTGAAGCCATTTGAAACCAATCT 59.655 37.500 0.00 0.00 0.00 2.40
2031 2445 5.163322 TGTGAAGCCATTTGAAACCAATCTT 60.163 36.000 0.00 0.00 0.00 2.40
2032 2446 5.759763 GTGAAGCCATTTGAAACCAATCTTT 59.240 36.000 0.00 0.00 0.00 2.52
2033 2447 5.759273 TGAAGCCATTTGAAACCAATCTTTG 59.241 36.000 0.00 0.00 0.00 2.77
2034 2448 5.294734 AGCCATTTGAAACCAATCTTTGT 57.705 34.783 0.00 0.00 0.00 2.83
2035 2449 5.683681 AGCCATTTGAAACCAATCTTTGTT 58.316 33.333 0.00 0.00 0.00 2.83
2036 2450 5.528320 AGCCATTTGAAACCAATCTTTGTTG 59.472 36.000 0.00 0.00 0.00 3.33
2037 2451 5.750650 CCATTTGAAACCAATCTTTGTTGC 58.249 37.500 0.00 0.00 0.00 4.17
2038 2452 5.528320 CCATTTGAAACCAATCTTTGTTGCT 59.472 36.000 0.00 0.00 0.00 3.91
2039 2453 6.705381 CCATTTGAAACCAATCTTTGTTGCTA 59.295 34.615 0.00 0.00 0.00 3.49
2040 2454 7.226325 CCATTTGAAACCAATCTTTGTTGCTAA 59.774 33.333 0.00 0.00 0.00 3.09
2041 2455 8.610896 CATTTGAAACCAATCTTTGTTGCTAAA 58.389 29.630 0.00 0.00 0.00 1.85
2042 2456 8.553459 TTTGAAACCAATCTTTGTTGCTAAAA 57.447 26.923 0.00 0.00 0.00 1.52
2043 2457 8.729805 TTGAAACCAATCTTTGTTGCTAAAAT 57.270 26.923 0.00 0.00 0.00 1.82
2044 2458 9.823647 TTGAAACCAATCTTTGTTGCTAAAATA 57.176 25.926 0.00 0.00 0.00 1.40
2045 2459 9.474920 TGAAACCAATCTTTGTTGCTAAAATAG 57.525 29.630 0.00 0.00 0.00 1.73
2069 2483 5.815850 CATAATTGCAGTGGCGTTATTACA 58.184 37.500 0.00 0.00 45.35 2.41
2070 2484 4.775058 AATTGCAGTGGCGTTATTACAA 57.225 36.364 0.00 0.00 45.35 2.41
2071 2485 3.822594 TTGCAGTGGCGTTATTACAAG 57.177 42.857 0.00 0.00 45.35 3.16
2074 2488 2.095466 GCAGTGGCGTTATTACAAGCAA 60.095 45.455 0.00 0.00 0.00 3.91
2080 2494 4.926238 TGGCGTTATTACAAGCAAAAATGG 59.074 37.500 0.00 0.00 0.00 3.16
2081 2495 4.926832 GGCGTTATTACAAGCAAAAATGGT 59.073 37.500 0.00 0.00 0.00 3.55
2085 2499 7.947830 GCGTTATTACAAGCAAAAATGGTAAAC 59.052 33.333 0.00 0.00 0.00 2.01
2088 2502 6.836577 TTACAAGCAAAAATGGTAAACTGC 57.163 33.333 0.00 0.00 0.00 4.40
2093 2507 4.574421 AGCAAAAATGGTAAACTGCAAACC 59.426 37.500 0.00 0.00 32.21 3.27
2094 2508 4.574421 GCAAAAATGGTAAACTGCAAACCT 59.426 37.500 8.23 0.00 34.23 3.50
2095 2509 5.755861 GCAAAAATGGTAAACTGCAAACCTA 59.244 36.000 8.23 0.00 34.23 3.08
2096 2510 6.292649 GCAAAAATGGTAAACTGCAAACCTAC 60.293 38.462 8.23 0.00 34.23 3.18
2097 2511 5.462530 AAATGGTAAACTGCAAACCTACC 57.537 39.130 8.23 7.55 34.23 3.18
2099 2513 4.173290 TGGTAAACTGCAAACCTACCTT 57.827 40.909 12.58 0.00 34.35 3.50
2101 2515 5.065235 TGGTAAACTGCAAACCTACCTTAC 58.935 41.667 12.58 0.00 34.35 2.34
2102 2516 4.456911 GGTAAACTGCAAACCTACCTTACC 59.543 45.833 6.67 0.00 32.66 2.85
2103 2517 2.467566 ACTGCAAACCTACCTTACCG 57.532 50.000 0.00 0.00 0.00 4.02
2106 2520 1.972795 TGCAAACCTACCTTACCGACT 59.027 47.619 0.00 0.00 0.00 4.18
2107 2521 2.369532 TGCAAACCTACCTTACCGACTT 59.630 45.455 0.00 0.00 0.00 3.01
2108 2522 2.740447 GCAAACCTACCTTACCGACTTG 59.260 50.000 0.00 0.00 0.00 3.16
2109 2523 3.555586 GCAAACCTACCTTACCGACTTGA 60.556 47.826 0.00 0.00 0.00 3.02
2111 2525 4.732672 AACCTACCTTACCGACTTGATC 57.267 45.455 0.00 0.00 0.00 2.92
2112 2526 3.705051 ACCTACCTTACCGACTTGATCA 58.295 45.455 0.00 0.00 0.00 2.92
2114 2528 4.715297 ACCTACCTTACCGACTTGATCAAT 59.285 41.667 8.96 0.00 0.00 2.57
2115 2529 5.050490 CCTACCTTACCGACTTGATCAATG 58.950 45.833 8.96 6.02 0.00 2.82
2116 2530 3.270877 ACCTTACCGACTTGATCAATGC 58.729 45.455 8.96 3.20 0.00 3.56
2117 2531 2.614057 CCTTACCGACTTGATCAATGCC 59.386 50.000 8.96 0.48 0.00 4.40
2118 2532 2.325583 TACCGACTTGATCAATGCCC 57.674 50.000 8.96 0.00 0.00 5.36
2119 2533 0.394352 ACCGACTTGATCAATGCCCC 60.394 55.000 8.96 0.00 0.00 5.80
2120 2534 0.107017 CCGACTTGATCAATGCCCCT 60.107 55.000 8.96 0.00 0.00 4.79
2121 2535 1.140852 CCGACTTGATCAATGCCCCTA 59.859 52.381 8.96 0.00 0.00 3.53
2122 2536 2.487934 CGACTTGATCAATGCCCCTAG 58.512 52.381 8.96 0.00 0.00 3.02
2123 2537 2.158900 CGACTTGATCAATGCCCCTAGT 60.159 50.000 8.96 0.00 0.00 2.57
2124 2538 3.682718 CGACTTGATCAATGCCCCTAGTT 60.683 47.826 8.96 0.00 0.00 2.24
2126 2540 4.273318 ACTTGATCAATGCCCCTAGTTTC 58.727 43.478 8.96 0.00 0.00 2.78
2127 2541 3.297134 TGATCAATGCCCCTAGTTTCC 57.703 47.619 0.00 0.00 0.00 3.13
2131 2545 1.005924 CAATGCCCCTAGTTTCCCACT 59.994 52.381 0.00 0.00 39.87 4.00
2133 2547 2.047769 TGCCCCTAGTTTCCCACTAA 57.952 50.000 0.00 0.00 37.54 2.24
2135 2549 2.508300 TGCCCCTAGTTTCCCACTAATC 59.492 50.000 0.00 0.00 37.54 1.75
2136 2550 2.158652 GCCCCTAGTTTCCCACTAATCC 60.159 54.545 0.00 0.00 37.54 3.01
2138 2552 3.118000 CCCCTAGTTTCCCACTAATCCAC 60.118 52.174 0.00 0.00 37.54 4.02
2139 2553 3.118000 CCCTAGTTTCCCACTAATCCACC 60.118 52.174 0.00 0.00 37.54 4.61
2144 2558 2.176247 TCCCACTAATCCACCTCCTC 57.824 55.000 0.00 0.00 0.00 3.71
2146 2560 1.132500 CCACTAATCCACCTCCTCCC 58.868 60.000 0.00 0.00 0.00 4.30
2147 2561 0.753262 CACTAATCCACCTCCTCCCG 59.247 60.000 0.00 0.00 0.00 5.14
2150 2689 0.754217 TAATCCACCTCCTCCCGTCG 60.754 60.000 0.00 0.00 0.00 5.12
2163 2702 1.210967 TCCCGTCGGCCATTTATTCTT 59.789 47.619 5.50 0.00 0.00 2.52
2166 2705 2.287915 CCGTCGGCCATTTATTCTTCTG 59.712 50.000 2.24 0.00 0.00 3.02
2172 2711 4.022589 CGGCCATTTATTCTTCTGATGCAT 60.023 41.667 2.24 0.00 0.00 3.96
2177 2716 4.541085 TTATTCTTCTGATGCATGTGCG 57.459 40.909 2.46 0.00 45.83 5.34
2182 2721 0.798159 TCTGATGCATGTGCGTGTTC 59.202 50.000 2.46 0.00 45.83 3.18
2183 2722 0.800631 CTGATGCATGTGCGTGTTCT 59.199 50.000 2.46 0.00 45.83 3.01
2185 2724 0.798159 GATGCATGTGCGTGTTCTGA 59.202 50.000 2.46 0.00 45.83 3.27
2242 2784 2.032681 GCGCACCAGAACCTTCCT 59.967 61.111 0.30 0.00 0.00 3.36
2276 2818 0.888619 AGATCCAGTCGTTGAAGCGA 59.111 50.000 0.00 0.00 38.68 4.93
2291 2833 0.874390 AGCGACGCATTTCACAACAT 59.126 45.000 23.70 0.00 0.00 2.71
2303 2845 1.039068 CACAACATCTGCCCAAACCA 58.961 50.000 0.00 0.00 0.00 3.67
2306 2848 1.526575 AACATCTGCCCAAACCAGCG 61.527 55.000 0.00 0.00 0.00 5.18
2315 2857 1.815421 CAAACCAGCGAGCGCCTAT 60.815 57.895 11.66 0.00 43.17 2.57
2318 2860 2.202932 CCAGCGAGCGCCTATGTT 60.203 61.111 11.66 0.00 43.17 2.71
2334 2876 1.296715 GTTGCCATCTCGTCCCTGT 59.703 57.895 0.00 0.00 0.00 4.00
2349 2891 1.293179 CTGTCCTGGACGTGCATCA 59.707 57.895 21.15 9.60 34.95 3.07
2353 2895 1.141665 CCTGGACGTGCATCATCGA 59.858 57.895 11.16 0.00 0.00 3.59
2354 2896 0.873312 CCTGGACGTGCATCATCGAG 60.873 60.000 11.16 0.00 0.00 4.04
2361 2903 1.153107 TGCATCATCGAGGCCAAGG 60.153 57.895 5.01 0.00 38.67 3.61
2381 2923 0.992072 CGTCGTCACACATGATCCAC 59.008 55.000 0.00 0.00 37.14 4.02
2382 2924 1.668628 CGTCGTCACACATGATCCACA 60.669 52.381 0.00 0.00 37.14 4.17
2405 2947 3.221834 CGACGACGTCTTCCTGATC 57.778 57.895 24.36 0.00 34.56 2.92
2478 3020 1.760613 TCTTCGGGAACTGTGTCAAGT 59.239 47.619 0.00 0.00 35.30 3.16
2552 3094 3.853330 CATGTCGACGGCCTTGCG 61.853 66.667 11.62 1.20 0.00 4.85
2606 3148 4.410400 GGGTTGGAGGCGACAGGG 62.410 72.222 0.00 0.00 0.00 4.45
2693 3235 2.283676 ACGGTGGGGTCGTCTCAT 60.284 61.111 0.00 0.00 35.87 2.90
2705 3247 0.460109 CGTCTCATCGGTTCATGGCA 60.460 55.000 0.00 0.00 0.00 4.92
2708 3250 2.802816 GTCTCATCGGTTCATGGCATAC 59.197 50.000 0.00 0.00 0.00 2.39
2709 3251 2.146342 CTCATCGGTTCATGGCATACC 58.854 52.381 9.04 9.04 0.00 2.73
2723 3265 0.102481 CATACCAGACGGACTTCGGG 59.898 60.000 0.00 0.00 44.45 5.14
2769 3311 2.892640 CGTCCATCTTCGGGAGCA 59.107 61.111 0.00 0.00 34.44 4.26
2775 3317 2.351244 ATCTTCGGGAGCAGCGACA 61.351 57.895 0.00 0.00 0.00 4.35
2789 3331 3.807538 GACATGGTGGCGCTGCTG 61.808 66.667 7.64 0.73 0.00 4.41
2867 3409 1.027357 CCTTCGCCCCTGATTTCATG 58.973 55.000 0.00 0.00 0.00 3.07
2871 3413 3.846180 CCCCTGATTTCATGGGCG 58.154 61.111 7.83 0.71 43.27 6.13
2899 3445 6.403049 TCAACGGCTTGAAATTCTAGATGTA 58.597 36.000 8.55 0.00 33.20 2.29
2902 3448 5.581085 ACGGCTTGAAATTCTAGATGTACAC 59.419 40.000 8.55 0.00 0.00 2.90
2967 3513 5.105513 TCGTGCTTCAGTATTTGGTGAGATA 60.106 40.000 0.00 0.00 0.00 1.98
3006 3552 7.978975 TGTAAAATTTCAGAAAACCCAACTCTG 59.021 33.333 0.00 0.00 38.34 3.35
3015 3561 1.348064 ACCCAACTCTGACCGAATGA 58.652 50.000 0.00 0.00 0.00 2.57
3016 3562 1.909302 ACCCAACTCTGACCGAATGAT 59.091 47.619 0.00 0.00 0.00 2.45
3017 3563 2.305927 ACCCAACTCTGACCGAATGATT 59.694 45.455 0.00 0.00 0.00 2.57
3018 3564 3.517901 ACCCAACTCTGACCGAATGATTA 59.482 43.478 0.00 0.00 0.00 1.75
3019 3565 4.122776 CCCAACTCTGACCGAATGATTAG 58.877 47.826 0.00 0.00 0.00 1.73
3020 3566 4.122776 CCAACTCTGACCGAATGATTAGG 58.877 47.826 2.59 2.59 0.00 2.69
3021 3567 3.460857 ACTCTGACCGAATGATTAGGC 57.539 47.619 4.12 0.00 0.00 3.93
3022 3568 3.034635 ACTCTGACCGAATGATTAGGCT 58.965 45.455 4.12 0.00 0.00 4.58
3023 3569 3.181471 ACTCTGACCGAATGATTAGGCTG 60.181 47.826 4.12 2.65 0.00 4.85
3024 3570 2.766263 TCTGACCGAATGATTAGGCTGT 59.234 45.455 4.12 0.00 0.00 4.40
3025 3571 3.197766 TCTGACCGAATGATTAGGCTGTT 59.802 43.478 4.12 0.00 0.00 3.16
3026 3572 3.531538 TGACCGAATGATTAGGCTGTTC 58.468 45.455 4.12 0.00 0.00 3.18
3027 3573 3.055458 TGACCGAATGATTAGGCTGTTCA 60.055 43.478 4.12 0.00 0.00 3.18
3028 3574 4.130118 GACCGAATGATTAGGCTGTTCAT 58.870 43.478 4.12 2.52 0.00 2.57
3029 3575 5.163353 TGACCGAATGATTAGGCTGTTCATA 60.163 40.000 12.58 0.00 30.17 2.15
3030 3576 5.300752 ACCGAATGATTAGGCTGTTCATAG 58.699 41.667 12.58 10.30 30.17 2.23
3031 3577 5.163301 ACCGAATGATTAGGCTGTTCATAGT 60.163 40.000 12.58 9.00 30.17 2.12
3032 3578 5.178252 CCGAATGATTAGGCTGTTCATAGTG 59.822 44.000 12.58 7.21 30.17 2.74
3033 3579 5.985530 CGAATGATTAGGCTGTTCATAGTGA 59.014 40.000 12.58 0.00 30.17 3.41
3034 3580 6.479990 CGAATGATTAGGCTGTTCATAGTGAA 59.520 38.462 12.58 0.00 33.32 3.18
3035 3581 7.307042 CGAATGATTAGGCTGTTCATAGTGAAG 60.307 40.741 12.58 1.45 37.00 3.02
3036 3582 5.674525 TGATTAGGCTGTTCATAGTGAAGG 58.325 41.667 0.00 0.00 37.00 3.46
3037 3583 4.487714 TTAGGCTGTTCATAGTGAAGGG 57.512 45.455 0.00 0.00 37.00 3.95
3038 3584 2.269940 AGGCTGTTCATAGTGAAGGGT 58.730 47.619 0.00 0.00 37.00 4.34
3039 3585 3.450904 AGGCTGTTCATAGTGAAGGGTA 58.549 45.455 0.00 0.00 37.00 3.69
3040 3586 4.040755 AGGCTGTTCATAGTGAAGGGTAT 58.959 43.478 0.00 0.00 37.00 2.73
3041 3587 4.101741 AGGCTGTTCATAGTGAAGGGTATC 59.898 45.833 0.00 0.00 37.00 2.24
3042 3588 4.141711 GGCTGTTCATAGTGAAGGGTATCA 60.142 45.833 0.00 0.00 37.00 2.15
3043 3589 5.455326 GGCTGTTCATAGTGAAGGGTATCAT 60.455 44.000 0.00 0.00 37.00 2.45
3044 3590 6.239600 GGCTGTTCATAGTGAAGGGTATCATA 60.240 42.308 0.00 0.00 37.00 2.15
3045 3591 7.390027 GCTGTTCATAGTGAAGGGTATCATAT 58.610 38.462 0.00 0.00 37.00 1.78
3046 3592 8.531982 GCTGTTCATAGTGAAGGGTATCATATA 58.468 37.037 0.00 0.00 37.00 0.86
3157 3703 3.410508 TCATGCATGACACAAAGTAGCA 58.589 40.909 25.42 0.00 37.13 3.49
3158 3704 4.011698 TCATGCATGACACAAAGTAGCAT 58.988 39.130 25.42 0.00 41.24 3.79
3159 3705 5.184711 TCATGCATGACACAAAGTAGCATA 58.815 37.500 25.42 0.00 39.67 3.14
3160 3706 5.647225 TCATGCATGACACAAAGTAGCATAA 59.353 36.000 25.42 0.00 39.67 1.90
3161 3707 5.295431 TGCATGACACAAAGTAGCATAAC 57.705 39.130 0.00 0.00 30.65 1.89
3162 3708 4.759183 TGCATGACACAAAGTAGCATAACA 59.241 37.500 0.00 0.00 30.65 2.41
3163 3709 5.415389 TGCATGACACAAAGTAGCATAACAT 59.585 36.000 0.00 0.00 30.65 2.71
3164 3710 6.072008 TGCATGACACAAAGTAGCATAACATT 60.072 34.615 0.00 0.00 30.65 2.71
3165 3711 6.808212 GCATGACACAAAGTAGCATAACATTT 59.192 34.615 0.00 0.00 0.00 2.32
3166 3712 7.967854 GCATGACACAAAGTAGCATAACATTTA 59.032 33.333 0.00 0.00 0.00 1.40
3167 3713 9.838975 CATGACACAAAGTAGCATAACATTTAA 57.161 29.630 0.00 0.00 0.00 1.52
3168 3714 9.840427 ATGACACAAAGTAGCATAACATTTAAC 57.160 29.630 0.00 0.00 0.00 2.01
3169 3715 8.841300 TGACACAAAGTAGCATAACATTTAACA 58.159 29.630 0.00 0.00 0.00 2.41
3170 3716 9.840427 GACACAAAGTAGCATAACATTTAACAT 57.160 29.630 0.00 0.00 0.00 2.71
3171 3717 9.840427 ACACAAAGTAGCATAACATTTAACATC 57.160 29.630 0.00 0.00 0.00 3.06
3172 3718 9.838975 CACAAAGTAGCATAACATTTAACATCA 57.161 29.630 0.00 0.00 0.00 3.07
3205 3751 9.950496 ATCTACATATATTGCTTTAACCCTCTG 57.050 33.333 0.00 0.00 0.00 3.35
3206 3752 8.934697 TCTACATATATTGCTTTAACCCTCTGT 58.065 33.333 0.00 0.00 0.00 3.41
3207 3753 9.209175 CTACATATATTGCTTTAACCCTCTGTC 57.791 37.037 0.00 0.00 0.00 3.51
3208 3754 7.806180 ACATATATTGCTTTAACCCTCTGTCT 58.194 34.615 0.00 0.00 0.00 3.41
3209 3755 7.934120 ACATATATTGCTTTAACCCTCTGTCTC 59.066 37.037 0.00 0.00 0.00 3.36
3210 3756 4.917906 ATTGCTTTAACCCTCTGTCTCT 57.082 40.909 0.00 0.00 0.00 3.10
3211 3757 4.706842 TTGCTTTAACCCTCTGTCTCTT 57.293 40.909 0.00 0.00 0.00 2.85
3212 3758 4.273148 TGCTTTAACCCTCTGTCTCTTC 57.727 45.455 0.00 0.00 0.00 2.87
3213 3759 3.904339 TGCTTTAACCCTCTGTCTCTTCT 59.096 43.478 0.00 0.00 0.00 2.85
3214 3760 4.348168 TGCTTTAACCCTCTGTCTCTTCTT 59.652 41.667 0.00 0.00 0.00 2.52
3215 3761 5.163195 TGCTTTAACCCTCTGTCTCTTCTTT 60.163 40.000 0.00 0.00 0.00 2.52
3216 3762 6.042781 TGCTTTAACCCTCTGTCTCTTCTTTA 59.957 38.462 0.00 0.00 0.00 1.85
3217 3763 6.935208 GCTTTAACCCTCTGTCTCTTCTTTAA 59.065 38.462 0.00 0.00 0.00 1.52
3218 3764 7.608376 GCTTTAACCCTCTGTCTCTTCTTTAAT 59.392 37.037 0.00 0.00 0.00 1.40
3219 3765 9.508642 CTTTAACCCTCTGTCTCTTCTTTAATT 57.491 33.333 0.00 0.00 0.00 1.40
3220 3766 8.848474 TTAACCCTCTGTCTCTTCTTTAATTG 57.152 34.615 0.00 0.00 0.00 2.32
3221 3767 6.441088 ACCCTCTGTCTCTTCTTTAATTGT 57.559 37.500 0.00 0.00 0.00 2.71
3222 3768 6.468543 ACCCTCTGTCTCTTCTTTAATTGTC 58.531 40.000 0.00 0.00 0.00 3.18
3223 3769 6.271159 ACCCTCTGTCTCTTCTTTAATTGTCT 59.729 38.462 0.00 0.00 0.00 3.41
3224 3770 6.593382 CCCTCTGTCTCTTCTTTAATTGTCTG 59.407 42.308 0.00 0.00 0.00 3.51
3225 3771 6.091986 CCTCTGTCTCTTCTTTAATTGTCTGC 59.908 42.308 0.00 0.00 0.00 4.26
3226 3772 6.763355 TCTGTCTCTTCTTTAATTGTCTGCT 58.237 36.000 0.00 0.00 0.00 4.24
3227 3773 7.896811 TCTGTCTCTTCTTTAATTGTCTGCTA 58.103 34.615 0.00 0.00 0.00 3.49
3228 3774 7.815068 TCTGTCTCTTCTTTAATTGTCTGCTAC 59.185 37.037 0.00 0.00 0.00 3.58
3229 3775 7.441836 TGTCTCTTCTTTAATTGTCTGCTACA 58.558 34.615 0.00 0.00 35.88 2.74
3230 3776 8.097038 TGTCTCTTCTTTAATTGTCTGCTACAT 58.903 33.333 0.00 0.00 38.10 2.29
3231 3777 9.587772 GTCTCTTCTTTAATTGTCTGCTACATA 57.412 33.333 0.00 0.00 38.10 2.29
3234 3780 9.383519 TCTTCTTTAATTGTCTGCTACATAAGG 57.616 33.333 0.00 0.00 38.10 2.69
3235 3781 9.167311 CTTCTTTAATTGTCTGCTACATAAGGT 57.833 33.333 0.00 0.00 38.10 3.50
3236 3782 9.515226 TTCTTTAATTGTCTGCTACATAAGGTT 57.485 29.630 0.00 0.00 38.10 3.50
3237 3783 9.515226 TCTTTAATTGTCTGCTACATAAGGTTT 57.485 29.630 0.00 0.00 38.10 3.27
3238 3784 9.559958 CTTTAATTGTCTGCTACATAAGGTTTG 57.440 33.333 0.00 0.00 38.10 2.93
3239 3785 5.567138 ATTGTCTGCTACATAAGGTTTGC 57.433 39.130 0.00 0.00 38.10 3.68
3240 3786 4.286297 TGTCTGCTACATAAGGTTTGCT 57.714 40.909 0.00 0.00 31.43 3.91
3241 3787 5.414789 TGTCTGCTACATAAGGTTTGCTA 57.585 39.130 0.00 0.00 31.43 3.49
3242 3788 5.419542 TGTCTGCTACATAAGGTTTGCTAG 58.580 41.667 0.00 0.00 31.43 3.42
3243 3789 5.046591 TGTCTGCTACATAAGGTTTGCTAGT 60.047 40.000 0.00 0.00 31.43 2.57
3244 3790 5.520649 GTCTGCTACATAAGGTTTGCTAGTC 59.479 44.000 0.00 0.00 0.00 2.59
3245 3791 4.766375 TGCTACATAAGGTTTGCTAGTCC 58.234 43.478 0.00 0.00 0.00 3.85
3246 3792 4.127907 GCTACATAAGGTTTGCTAGTCCC 58.872 47.826 0.00 0.00 0.00 4.46
3247 3793 4.383770 GCTACATAAGGTTTGCTAGTCCCA 60.384 45.833 0.00 0.00 0.00 4.37
3248 3794 4.650972 ACATAAGGTTTGCTAGTCCCAA 57.349 40.909 0.00 0.00 0.00 4.12
3249 3795 4.589908 ACATAAGGTTTGCTAGTCCCAAG 58.410 43.478 0.00 0.00 0.00 3.61
3250 3796 4.042934 ACATAAGGTTTGCTAGTCCCAAGT 59.957 41.667 0.00 0.00 0.00 3.16
3251 3797 2.568623 AGGTTTGCTAGTCCCAAGTG 57.431 50.000 0.00 0.00 0.00 3.16
3252 3798 1.774856 AGGTTTGCTAGTCCCAAGTGT 59.225 47.619 0.00 0.00 0.00 3.55
3253 3799 2.976882 AGGTTTGCTAGTCCCAAGTGTA 59.023 45.455 0.00 0.00 0.00 2.90
3254 3800 3.587506 AGGTTTGCTAGTCCCAAGTGTAT 59.412 43.478 0.00 0.00 0.00 2.29
3255 3801 3.689649 GGTTTGCTAGTCCCAAGTGTATG 59.310 47.826 0.00 0.00 0.00 2.39
3256 3802 4.564821 GGTTTGCTAGTCCCAAGTGTATGA 60.565 45.833 0.00 0.00 0.00 2.15
3257 3803 5.186198 GTTTGCTAGTCCCAAGTGTATGAT 58.814 41.667 0.00 0.00 0.00 2.45
3258 3804 6.346096 GTTTGCTAGTCCCAAGTGTATGATA 58.654 40.000 0.00 0.00 0.00 2.15
3259 3805 5.531122 TGCTAGTCCCAAGTGTATGATAC 57.469 43.478 0.00 0.00 0.00 2.24
3260 3806 4.344102 TGCTAGTCCCAAGTGTATGATACC 59.656 45.833 0.00 0.00 0.00 2.73
3261 3807 4.558898 GCTAGTCCCAAGTGTATGATACCG 60.559 50.000 0.00 0.00 0.00 4.02
3262 3808 2.698797 AGTCCCAAGTGTATGATACCGG 59.301 50.000 0.00 0.00 0.00 5.28
3263 3809 2.433239 GTCCCAAGTGTATGATACCGGT 59.567 50.000 13.98 13.98 0.00 5.28
3264 3810 3.109151 TCCCAAGTGTATGATACCGGTT 58.891 45.455 15.04 0.00 0.00 4.44
3265 3811 4.099881 GTCCCAAGTGTATGATACCGGTTA 59.900 45.833 15.04 0.00 0.00 2.85
3266 3812 4.715792 TCCCAAGTGTATGATACCGGTTAA 59.284 41.667 15.04 0.00 0.00 2.01
3267 3813 5.054477 CCCAAGTGTATGATACCGGTTAAG 58.946 45.833 15.04 0.00 0.00 1.85
3268 3814 5.395990 CCCAAGTGTATGATACCGGTTAAGT 60.396 44.000 15.04 0.00 0.00 2.24
3269 3815 6.110707 CCAAGTGTATGATACCGGTTAAGTT 58.889 40.000 15.04 0.00 0.00 2.66
3270 3816 7.267128 CCAAGTGTATGATACCGGTTAAGTTA 58.733 38.462 15.04 0.00 0.00 2.24
3271 3817 7.929785 CCAAGTGTATGATACCGGTTAAGTTAT 59.070 37.037 15.04 0.00 0.00 1.89
3272 3818 8.975439 CAAGTGTATGATACCGGTTAAGTTATC 58.025 37.037 15.04 9.36 0.00 1.75
3273 3819 8.474710 AGTGTATGATACCGGTTAAGTTATCT 57.525 34.615 15.04 0.96 0.00 1.98
3274 3820 8.574737 AGTGTATGATACCGGTTAAGTTATCTC 58.425 37.037 15.04 4.60 0.00 2.75
3275 3821 7.811713 GTGTATGATACCGGTTAAGTTATCTCC 59.188 40.741 15.04 1.59 0.00 3.71
3276 3822 6.989155 ATGATACCGGTTAAGTTATCTCCA 57.011 37.500 15.04 0.00 0.00 3.86
3406 3955 6.183360 ACGCAGATCCAATAAGAATCTCTTCT 60.183 38.462 0.00 0.00 43.71 2.85
3442 3991 5.049828 AGACAAAGGTTTTACAAATGCAGC 58.950 37.500 0.00 0.00 0.00 5.25
3652 5463 3.129871 GCCTGCATCTATGTCTTCTCAC 58.870 50.000 0.00 0.00 0.00 3.51
3697 5508 3.452264 TGTACATGCTCTAATGTGGCTCT 59.548 43.478 0.00 0.00 40.93 4.09
3850 5665 8.147058 TCACATACAAAATTGTAAGCCATGTTT 58.853 29.630 9.82 0.00 45.74 2.83
3889 5705 5.149273 CAGATTTGTCATGTTTCTCCAACG 58.851 41.667 0.00 0.00 38.36 4.10
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 4.019858 TCTGAGATCGAGGAATGAGTTGT 58.980 43.478 0.00 0.00 0.00 3.32
7 8 4.358851 GTCTGAGATCGAGGAATGAGTTG 58.641 47.826 0.00 0.00 0.00 3.16
9 10 2.616376 CGTCTGAGATCGAGGAATGAGT 59.384 50.000 0.00 0.00 0.00 3.41
29 30 2.858344 CGGTTAATACAGCTCAGTTCCG 59.142 50.000 0.00 0.00 0.00 4.30
38 39 9.991388 TTACAAATTATGTTCGGTTAATACAGC 57.009 29.630 0.00 0.00 43.63 4.40
128 129 3.430929 CCGCACTCTCCTAAGCATAACTT 60.431 47.826 0.00 0.00 42.76 2.66
137 138 0.034337 AAAACGCCGCACTCTCCTAA 59.966 50.000 0.00 0.00 0.00 2.69
185 186 9.761504 TTTTCTGATGCTTTGAAATGTTTCATA 57.238 25.926 8.82 4.15 45.65 2.15
186 187 8.665643 TTTTCTGATGCTTTGAAATGTTTCAT 57.334 26.923 8.82 0.00 45.65 2.57
187 188 8.665643 ATTTTCTGATGCTTTGAAATGTTTCA 57.334 26.923 4.16 4.16 44.78 2.69
188 189 9.590088 GAATTTTCTGATGCTTTGAAATGTTTC 57.410 29.630 0.00 0.00 37.69 2.78
219 232 9.863845 TTCTCACGAAATTCTACACAATGTATA 57.136 29.630 0.00 0.00 31.66 1.47
223 236 8.955061 ATTTTCTCACGAAATTCTACACAATG 57.045 30.769 0.00 0.00 38.81 2.82
226 239 8.596271 TGTATTTTCTCACGAAATTCTACACA 57.404 30.769 0.00 0.00 38.81 3.72
235 277 8.218441 CACGAAGTAATGTATTTTCTCACGAAA 58.782 33.333 0.00 0.00 41.61 3.46
239 281 7.063544 AGCTCACGAAGTAATGTATTTTCTCAC 59.936 37.037 0.00 0.00 41.61 3.51
287 329 6.959311 GCACTGTTCACTATATAAAACCAACG 59.041 38.462 0.00 0.00 0.00 4.10
360 402 4.232221 CAAAACACATTGACATGAGAGCC 58.768 43.478 0.00 0.00 34.11 4.70
377 419 6.407475 ACTTGCAAAACTTCATGACAAAAC 57.593 33.333 0.00 0.00 0.00 2.43
448 490 7.571080 AAACAAATGTTCCAATGCTTCAAAT 57.429 28.000 0.00 0.00 37.25 2.32
508 551 7.443477 TGGAAATTCATTTTGAAGCTTGATCA 58.557 30.769 2.10 0.00 40.05 2.92
510 553 7.148306 GCATGGAAATTCATTTTGAAGCTTGAT 60.148 33.333 2.10 0.00 40.05 2.57
513 556 5.413523 GGCATGGAAATTCATTTTGAAGCTT 59.586 36.000 0.00 0.00 40.05 3.74
544 587 1.126113 CGAATCTCGTCGTTTTGGGTG 59.874 52.381 0.00 0.00 36.26 4.61
545 588 1.425412 CGAATCTCGTCGTTTTGGGT 58.575 50.000 0.00 0.00 36.26 4.51
564 626 5.528690 TCCATTGCTATAGTTTGCAGATCAC 59.471 40.000 0.84 0.00 40.46 3.06
570 632 5.123820 GTCTGTTCCATTGCTATAGTTTGCA 59.876 40.000 0.84 0.00 37.42 4.08
608 670 8.646004 CCTATCATGGGTTGTATCTATCCATAG 58.354 40.741 0.00 0.00 36.55 2.23
624 686 1.331214 AAATTGCCGCCTATCATGGG 58.669 50.000 0.00 0.00 0.00 4.00
692 782 3.650139 TCTAAGTTTGTCTTCGCTGTCC 58.350 45.455 0.00 0.00 37.56 4.02
699 789 6.151691 TGCATGCAATTCTAAGTTTGTCTTC 58.848 36.000 20.30 0.00 37.56 2.87
712 802 3.621268 AGCAATGTTGATGCATGCAATTC 59.379 39.130 26.68 19.13 46.22 2.17
776 870 3.706086 ACAAACAAAATGGTCCTTGCTCT 59.294 39.130 0.00 0.00 0.00 4.09
777 871 4.051237 GACAAACAAAATGGTCCTTGCTC 58.949 43.478 0.00 0.00 0.00 4.26
778 872 3.706086 AGACAAACAAAATGGTCCTTGCT 59.294 39.130 0.00 0.00 0.00 3.91
779 873 4.051237 GAGACAAACAAAATGGTCCTTGC 58.949 43.478 0.00 0.00 0.00 4.01
780 874 4.501400 GGGAGACAAACAAAATGGTCCTTG 60.501 45.833 0.00 0.00 0.00 3.61
781 875 3.641436 GGGAGACAAACAAAATGGTCCTT 59.359 43.478 0.00 0.00 0.00 3.36
782 876 3.230976 GGGAGACAAACAAAATGGTCCT 58.769 45.455 0.00 0.00 0.00 3.85
783 877 2.962421 TGGGAGACAAACAAAATGGTCC 59.038 45.455 0.00 0.00 0.00 4.46
800 894 3.598715 AACACGACGACGCTGGGA 61.599 61.111 7.30 0.00 43.96 4.37
887 1013 5.362263 ACCAACGTGTCAAAACTGTAGTAT 58.638 37.500 0.00 0.00 0.00 2.12
915 1048 5.244851 GCTCTCTGATGGAGTATTATGGACA 59.755 44.000 0.00 0.00 42.40 4.02
953 1103 0.395311 ATCTAGAGCGGTGGGTCGAA 60.395 55.000 0.00 0.00 45.26 3.71
961 1111 0.396417 AGCTGGTGATCTAGAGCGGT 60.396 55.000 3.11 0.00 36.52 5.68
967 1117 3.640498 TGAGGATGAAGCTGGTGATCTAG 59.360 47.826 0.00 0.00 0.00 2.43
972 1131 0.615331 GGTGAGGATGAAGCTGGTGA 59.385 55.000 0.00 0.00 0.00 4.02
983 1142 0.316522 CATGATCGCTCGGTGAGGAT 59.683 55.000 0.00 0.00 0.00 3.24
990 1150 4.996434 GCCCCCATGATCGCTCGG 62.996 72.222 0.00 0.00 0.00 4.63
1014 1174 1.153997 GAGAACTCGCACCTCGTCC 60.154 63.158 0.00 0.00 39.67 4.79
1092 1261 0.617413 AGGAGAGCTTCATGGTGTGG 59.383 55.000 0.00 0.00 0.00 4.17
1096 1265 1.836802 GAGGAAGGAGAGCTTCATGGT 59.163 52.381 0.00 0.00 32.84 3.55
1225 1397 3.692406 GAAGACGGGGAGCGTGGT 61.692 66.667 0.00 0.00 0.00 4.16
1243 1415 2.438434 CTTTCCGGCAAGCGGGAT 60.438 61.111 20.01 0.00 43.41 3.85
1315 1487 1.043116 TTGACGCCCGAGGATGAGAT 61.043 55.000 0.00 0.00 0.00 2.75
1593 1773 1.153745 GAGCAAGTCTCCACGCGAT 60.154 57.895 15.93 0.00 35.77 4.58
1691 1877 2.483714 GCTCTCAACCGCAATATCCAGA 60.484 50.000 0.00 0.00 0.00 3.86
1702 1888 2.787249 CATTGGCGCTCTCAACCG 59.213 61.111 7.64 0.00 0.00 4.44
1770 1960 9.719355 TGAGCAAGTTGTTTTAGATAGATGTTA 57.281 29.630 4.48 0.00 0.00 2.41
1787 1977 3.484407 AGACTGCAAGATTGAGCAAGTT 58.516 40.909 0.00 0.00 40.73 2.66
1799 1989 9.736023 AGTTTGTCTTTAATTTTAGACTGCAAG 57.264 29.630 16.13 0.00 41.05 4.01
1844 2258 5.060940 GCTCGGCAAGAAAAATATCAACAAC 59.939 40.000 0.00 0.00 0.00 3.32
1845 2259 5.160641 GCTCGGCAAGAAAAATATCAACAA 58.839 37.500 0.00 0.00 0.00 2.83
1846 2260 4.217334 TGCTCGGCAAGAAAAATATCAACA 59.783 37.500 0.00 0.00 34.76 3.33
1847 2261 4.732784 TGCTCGGCAAGAAAAATATCAAC 58.267 39.130 0.00 0.00 34.76 3.18
1848 2262 5.342433 CATGCTCGGCAAGAAAAATATCAA 58.658 37.500 2.68 0.00 43.62 2.57
1850 2264 3.732721 GCATGCTCGGCAAGAAAAATATC 59.267 43.478 11.37 0.00 43.62 1.63
1851 2265 3.130869 TGCATGCTCGGCAAGAAAAATAT 59.869 39.130 20.33 0.00 43.62 1.28
1852 2266 2.491298 TGCATGCTCGGCAAGAAAAATA 59.509 40.909 20.33 0.00 43.62 1.40
1853 2267 1.273048 TGCATGCTCGGCAAGAAAAAT 59.727 42.857 20.33 0.00 43.62 1.82
1855 2269 0.039256 GTGCATGCTCGGCAAGAAAA 60.039 50.000 20.33 0.00 43.62 2.29
1856 2270 1.171549 TGTGCATGCTCGGCAAGAAA 61.172 50.000 20.33 0.00 43.62 2.52
1857 2271 1.600356 TGTGCATGCTCGGCAAGAA 60.600 52.632 20.33 0.00 43.62 2.52
1858 2272 2.032376 TGTGCATGCTCGGCAAGA 59.968 55.556 20.33 0.00 43.62 3.02
1860 2274 2.594013 TGTGTGCATGCTCGGCAA 60.594 55.556 20.33 0.00 43.62 4.52
1861 2275 3.356267 GTGTGTGCATGCTCGGCA 61.356 61.111 20.33 14.90 44.86 5.69
1862 2276 4.450122 CGTGTGTGCATGCTCGGC 62.450 66.667 20.33 12.51 0.00 5.54
1869 2283 3.967393 TATGGCCGCGTGTGTGCAT 62.967 57.895 4.92 0.41 34.15 3.96
1870 2284 3.967393 ATATGGCCGCGTGTGTGCA 62.967 57.895 4.92 0.00 34.15 4.57
1872 2286 2.708865 CATATGGCCGCGTGTGTG 59.291 61.111 4.92 0.00 0.00 3.82
1874 2288 1.165907 AATCCATATGGCCGCGTGTG 61.166 55.000 17.58 0.00 34.44 3.82
1875 2289 0.884704 GAATCCATATGGCCGCGTGT 60.885 55.000 17.58 0.00 34.44 4.49
1876 2290 0.884259 TGAATCCATATGGCCGCGTG 60.884 55.000 17.58 0.00 34.44 5.34
1877 2291 0.603707 CTGAATCCATATGGCCGCGT 60.604 55.000 17.58 0.00 34.44 6.01
1878 2292 1.915614 GCTGAATCCATATGGCCGCG 61.916 60.000 17.58 0.00 34.44 6.46
1879 2293 0.607489 AGCTGAATCCATATGGCCGC 60.607 55.000 17.58 10.99 34.44 6.53
1880 2294 1.901591 AAGCTGAATCCATATGGCCG 58.098 50.000 17.58 1.06 34.44 6.13
1881 2295 2.288640 GCAAAGCTGAATCCATATGGCC 60.289 50.000 17.58 9.00 34.44 5.36
1882 2296 2.363038 TGCAAAGCTGAATCCATATGGC 59.637 45.455 17.58 3.84 34.44 4.40
1883 2297 3.243636 GGTGCAAAGCTGAATCCATATGG 60.244 47.826 16.25 16.25 0.00 2.74
1886 2300 2.016318 CGGTGCAAAGCTGAATCCATA 58.984 47.619 0.00 0.00 0.00 2.74
1888 2302 0.537143 ACGGTGCAAAGCTGAATCCA 60.537 50.000 0.00 0.00 0.00 3.41
1889 2303 0.598065 AACGGTGCAAAGCTGAATCC 59.402 50.000 0.00 0.00 0.00 3.01
1890 2304 2.053627 CAAACGGTGCAAAGCTGAATC 58.946 47.619 0.00 0.00 0.00 2.52
1891 2305 1.269726 CCAAACGGTGCAAAGCTGAAT 60.270 47.619 0.00 0.00 0.00 2.57
1894 2308 1.950630 GCCAAACGGTGCAAAGCTG 60.951 57.895 0.00 0.00 0.00 4.24
1895 2309 1.675720 AAGCCAAACGGTGCAAAGCT 61.676 50.000 0.00 0.00 0.00 3.74
1896 2310 0.809636 AAAGCCAAACGGTGCAAAGC 60.810 50.000 0.00 0.00 0.00 3.51
1897 2311 0.929615 CAAAGCCAAACGGTGCAAAG 59.070 50.000 0.00 0.00 0.00 2.77
1898 2312 1.086634 GCAAAGCCAAACGGTGCAAA 61.087 50.000 0.00 0.00 34.24 3.68
1899 2313 1.520342 GCAAAGCCAAACGGTGCAA 60.520 52.632 0.00 0.00 34.24 4.08
1901 2315 3.029735 CGCAAAGCCAAACGGTGC 61.030 61.111 0.00 0.00 0.00 5.01
1902 2316 3.029735 GCGCAAAGCCAAACGGTG 61.030 61.111 0.30 0.00 40.81 4.94
1903 2317 4.622456 CGCGCAAAGCCAAACGGT 62.622 61.111 8.75 0.00 44.76 4.83
1904 2318 3.815569 TTCGCGCAAAGCCAAACGG 62.816 57.895 8.75 0.00 44.76 4.44
1905 2319 1.274798 ATTTCGCGCAAAGCCAAACG 61.275 50.000 8.75 0.00 38.68 3.60
1906 2320 0.434628 GATTTCGCGCAAAGCCAAAC 59.565 50.000 8.75 0.00 38.68 2.93
1907 2321 2.807878 GATTTCGCGCAAAGCCAAA 58.192 47.368 8.75 0.00 44.76 3.28
1908 2322 4.550395 GATTTCGCGCAAAGCCAA 57.450 50.000 8.75 0.00 44.76 4.52
1911 2325 2.111756 CATAAGGATTTCGCGCAAAGC 58.888 47.619 8.75 9.99 43.95 3.51
1912 2326 3.063997 AGACATAAGGATTTCGCGCAAAG 59.936 43.478 8.75 0.00 0.00 2.77
1913 2327 3.006940 AGACATAAGGATTTCGCGCAAA 58.993 40.909 8.75 7.87 0.00 3.68
1914 2328 2.627945 AGACATAAGGATTTCGCGCAA 58.372 42.857 8.75 0.00 0.00 4.85
1915 2329 2.309528 AGACATAAGGATTTCGCGCA 57.690 45.000 8.75 0.00 0.00 6.09
1916 2330 4.789095 TTAAGACATAAGGATTTCGCGC 57.211 40.909 0.00 0.00 0.00 6.86
1917 2331 6.102006 TGTTTAAGACATAAGGATTTCGCG 57.898 37.500 0.00 0.00 32.00 5.87
1918 2332 6.967199 CCTTGTTTAAGACATAAGGATTTCGC 59.033 38.462 0.00 0.00 38.15 4.70
1919 2333 8.263940 TCCTTGTTTAAGACATAAGGATTTCG 57.736 34.615 0.00 0.00 39.34 3.46
1920 2334 9.449719 TCTCCTTGTTTAAGACATAAGGATTTC 57.550 33.333 0.00 0.00 41.94 2.17
1921 2335 9.454859 CTCTCCTTGTTTAAGACATAAGGATTT 57.545 33.333 0.00 0.00 41.94 2.17
1922 2336 8.826765 TCTCTCCTTGTTTAAGACATAAGGATT 58.173 33.333 0.00 0.00 41.94 3.01
1923 2337 8.380742 TCTCTCCTTGTTTAAGACATAAGGAT 57.619 34.615 0.00 0.00 41.94 3.24
1924 2338 7.455008 ACTCTCTCCTTGTTTAAGACATAAGGA 59.545 37.037 0.00 0.00 41.06 3.36
1925 2339 7.616313 ACTCTCTCCTTGTTTAAGACATAAGG 58.384 38.462 0.00 0.00 37.53 2.69
1926 2340 9.145865 GAACTCTCTCCTTGTTTAAGACATAAG 57.854 37.037 0.00 0.00 38.26 1.73
1927 2341 8.095169 GGAACTCTCTCCTTGTTTAAGACATAA 58.905 37.037 0.00 0.00 38.26 1.90
1928 2342 7.234782 TGGAACTCTCTCCTTGTTTAAGACATA 59.765 37.037 0.00 0.00 35.92 2.29
1929 2343 6.043243 TGGAACTCTCTCCTTGTTTAAGACAT 59.957 38.462 0.00 0.00 35.92 3.06
1930 2344 5.365605 TGGAACTCTCTCCTTGTTTAAGACA 59.634 40.000 0.00 0.00 35.92 3.41
1931 2345 5.855045 TGGAACTCTCTCCTTGTTTAAGAC 58.145 41.667 0.00 0.00 35.92 3.01
1932 2346 6.688073 ATGGAACTCTCTCCTTGTTTAAGA 57.312 37.500 0.00 0.00 35.92 2.10
1933 2347 7.663493 AGAAATGGAACTCTCTCCTTGTTTAAG 59.337 37.037 0.00 0.00 36.35 1.85
1934 2348 7.518188 AGAAATGGAACTCTCTCCTTGTTTAA 58.482 34.615 0.00 0.00 36.35 1.52
1935 2349 7.079451 AGAAATGGAACTCTCTCCTTGTTTA 57.921 36.000 0.00 0.00 36.35 2.01
1936 2350 5.946486 AGAAATGGAACTCTCTCCTTGTTT 58.054 37.500 0.00 0.00 36.35 2.83
1937 2351 5.574970 AGAAATGGAACTCTCTCCTTGTT 57.425 39.130 0.00 0.00 36.35 2.83
1938 2352 5.072329 TGAAGAAATGGAACTCTCTCCTTGT 59.928 40.000 0.00 0.00 36.35 3.16
1939 2353 5.555017 TGAAGAAATGGAACTCTCTCCTTG 58.445 41.667 0.00 0.00 36.35 3.61
1940 2354 5.832539 TGAAGAAATGGAACTCTCTCCTT 57.167 39.130 0.00 0.00 36.35 3.36
1941 2355 7.502060 TTATGAAGAAATGGAACTCTCTCCT 57.498 36.000 0.00 0.00 36.35 3.69
1942 2356 8.567285 TTTTATGAAGAAATGGAACTCTCTCC 57.433 34.615 0.00 0.00 35.88 3.71
1967 2381 8.739972 GGATTGAGAACTTGTACACCATATTTT 58.260 33.333 0.00 0.00 0.00 1.82
1968 2382 8.109634 AGGATTGAGAACTTGTACACCATATTT 58.890 33.333 0.00 0.00 0.00 1.40
1969 2383 7.633789 AGGATTGAGAACTTGTACACCATATT 58.366 34.615 0.00 0.00 0.00 1.28
1970 2384 7.200434 AGGATTGAGAACTTGTACACCATAT 57.800 36.000 0.00 0.00 0.00 1.78
1971 2385 6.620877 AGGATTGAGAACTTGTACACCATA 57.379 37.500 0.00 0.00 0.00 2.74
1972 2386 5.505181 AGGATTGAGAACTTGTACACCAT 57.495 39.130 0.00 0.00 0.00 3.55
1973 2387 4.974645 AGGATTGAGAACTTGTACACCA 57.025 40.909 0.00 0.00 0.00 4.17
1974 2388 5.046520 ACCTAGGATTGAGAACTTGTACACC 60.047 44.000 17.98 0.00 0.00 4.16
1975 2389 6.038997 ACCTAGGATTGAGAACTTGTACAC 57.961 41.667 17.98 0.00 0.00 2.90
1976 2390 6.681729 AACCTAGGATTGAGAACTTGTACA 57.318 37.500 17.98 0.00 0.00 2.90
1977 2391 9.668497 ATTTAACCTAGGATTGAGAACTTGTAC 57.332 33.333 17.98 0.00 0.00 2.90
1979 2393 9.588096 AAATTTAACCTAGGATTGAGAACTTGT 57.412 29.630 17.98 0.00 0.00 3.16
1980 2394 9.846248 CAAATTTAACCTAGGATTGAGAACTTG 57.154 33.333 17.98 4.19 0.00 3.16
1981 2395 9.588096 ACAAATTTAACCTAGGATTGAGAACTT 57.412 29.630 17.98 0.00 0.00 2.66
1982 2396 9.014297 CACAAATTTAACCTAGGATTGAGAACT 57.986 33.333 17.98 0.00 0.00 3.01
1983 2397 8.793592 ACACAAATTTAACCTAGGATTGAGAAC 58.206 33.333 17.98 0.00 0.00 3.01
1984 2398 8.792633 CACACAAATTTAACCTAGGATTGAGAA 58.207 33.333 17.98 1.68 0.00 2.87
1985 2399 8.160765 TCACACAAATTTAACCTAGGATTGAGA 58.839 33.333 17.98 0.00 0.00 3.27
1986 2400 8.335532 TCACACAAATTTAACCTAGGATTGAG 57.664 34.615 17.98 10.82 0.00 3.02
1987 2401 8.698973 TTCACACAAATTTAACCTAGGATTGA 57.301 30.769 17.98 0.00 0.00 2.57
1988 2402 7.542130 GCTTCACACAAATTTAACCTAGGATTG 59.458 37.037 17.98 12.11 0.00 2.67
1989 2403 7.309805 GGCTTCACACAAATTTAACCTAGGATT 60.310 37.037 17.98 8.76 0.00 3.01
1990 2404 6.152831 GGCTTCACACAAATTTAACCTAGGAT 59.847 38.462 17.98 6.20 0.00 3.24
1991 2405 5.475564 GGCTTCACACAAATTTAACCTAGGA 59.524 40.000 17.98 0.00 0.00 2.94
1992 2406 5.242838 TGGCTTCACACAAATTTAACCTAGG 59.757 40.000 7.41 7.41 0.00 3.02
1993 2407 6.325919 TGGCTTCACACAAATTTAACCTAG 57.674 37.500 0.00 0.00 0.00 3.02
1994 2408 6.909550 ATGGCTTCACACAAATTTAACCTA 57.090 33.333 0.00 0.00 0.00 3.08
1995 2409 5.806654 ATGGCTTCACACAAATTTAACCT 57.193 34.783 0.00 0.00 0.00 3.50
1996 2410 6.481644 TCAAATGGCTTCACACAAATTTAACC 59.518 34.615 0.00 0.00 0.00 2.85
1997 2411 7.475771 TCAAATGGCTTCACACAAATTTAAC 57.524 32.000 0.00 0.00 0.00 2.01
1998 2412 8.394121 GTTTCAAATGGCTTCACACAAATTTAA 58.606 29.630 0.00 0.00 0.00 1.52
1999 2413 7.011857 GGTTTCAAATGGCTTCACACAAATTTA 59.988 33.333 0.00 0.00 0.00 1.40
2000 2414 6.183360 GGTTTCAAATGGCTTCACACAAATTT 60.183 34.615 0.00 0.00 0.00 1.82
2001 2415 5.296531 GGTTTCAAATGGCTTCACACAAATT 59.703 36.000 0.00 0.00 0.00 1.82
2002 2416 4.815846 GGTTTCAAATGGCTTCACACAAAT 59.184 37.500 0.00 0.00 0.00 2.32
2003 2417 4.187694 GGTTTCAAATGGCTTCACACAAA 58.812 39.130 0.00 0.00 0.00 2.83
2004 2418 3.196469 TGGTTTCAAATGGCTTCACACAA 59.804 39.130 0.00 0.00 0.00 3.33
2005 2419 2.762887 TGGTTTCAAATGGCTTCACACA 59.237 40.909 0.00 0.00 0.00 3.72
2006 2420 3.451141 TGGTTTCAAATGGCTTCACAC 57.549 42.857 0.00 0.00 0.00 3.82
2007 2421 4.344679 AGATTGGTTTCAAATGGCTTCACA 59.655 37.500 0.00 0.00 36.36 3.58
2008 2422 4.886579 AGATTGGTTTCAAATGGCTTCAC 58.113 39.130 0.00 0.00 36.36 3.18
2009 2423 5.549742 AAGATTGGTTTCAAATGGCTTCA 57.450 34.783 0.00 0.00 36.36 3.02
2010 2424 5.759763 ACAAAGATTGGTTTCAAATGGCTTC 59.240 36.000 0.00 0.00 36.36 3.86
2011 2425 5.683681 ACAAAGATTGGTTTCAAATGGCTT 58.316 33.333 0.00 0.00 36.36 4.35
2012 2426 5.294734 ACAAAGATTGGTTTCAAATGGCT 57.705 34.783 0.00 0.00 36.36 4.75
2013 2427 5.750650 CAACAAAGATTGGTTTCAAATGGC 58.249 37.500 0.00 0.00 36.36 4.40
2014 2428 5.528320 AGCAACAAAGATTGGTTTCAAATGG 59.472 36.000 0.00 0.00 36.96 3.16
2015 2429 6.607735 AGCAACAAAGATTGGTTTCAAATG 57.392 33.333 0.00 0.00 36.96 2.32
2016 2430 8.729805 TTTAGCAACAAAGATTGGTTTCAAAT 57.270 26.923 0.00 0.00 40.62 2.32
2017 2431 8.553459 TTTTAGCAACAAAGATTGGTTTCAAA 57.447 26.923 0.00 0.00 40.62 2.69
2018 2432 8.729805 ATTTTAGCAACAAAGATTGGTTTCAA 57.270 26.923 0.00 0.00 40.62 2.69
2019 2433 9.474920 CTATTTTAGCAACAAAGATTGGTTTCA 57.525 29.630 0.00 0.00 40.62 2.69
2046 2460 5.815850 TGTAATAACGCCACTGCAATTATG 58.184 37.500 0.00 0.00 37.32 1.90
2047 2461 6.443934 TTGTAATAACGCCACTGCAATTAT 57.556 33.333 0.00 0.00 37.32 1.28
2048 2462 5.675071 GCTTGTAATAACGCCACTGCAATTA 60.675 40.000 0.00 0.00 37.32 1.40
2049 2463 4.732784 CTTGTAATAACGCCACTGCAATT 58.267 39.130 0.00 0.00 37.32 2.32
2050 2464 3.427503 GCTTGTAATAACGCCACTGCAAT 60.428 43.478 0.00 0.00 37.32 3.56
2051 2465 2.095466 GCTTGTAATAACGCCACTGCAA 60.095 45.455 0.00 0.00 37.32 4.08
2052 2466 1.466950 GCTTGTAATAACGCCACTGCA 59.533 47.619 0.00 0.00 37.32 4.41
2053 2467 1.466950 TGCTTGTAATAACGCCACTGC 59.533 47.619 0.00 0.00 0.00 4.40
2054 2468 3.822594 TTGCTTGTAATAACGCCACTG 57.177 42.857 0.00 0.00 0.00 3.66
2055 2469 4.839668 TTTTGCTTGTAATAACGCCACT 57.160 36.364 0.00 0.00 0.00 4.00
2056 2470 5.164002 CCATTTTTGCTTGTAATAACGCCAC 60.164 40.000 0.00 0.00 0.00 5.01
2057 2471 4.926238 CCATTTTTGCTTGTAATAACGCCA 59.074 37.500 0.00 0.00 0.00 5.69
2058 2472 4.926832 ACCATTTTTGCTTGTAATAACGCC 59.073 37.500 0.00 0.00 0.00 5.68
2059 2473 7.569677 TTACCATTTTTGCTTGTAATAACGC 57.430 32.000 0.00 0.00 0.00 4.84
2060 2474 9.187455 AGTTTACCATTTTTGCTTGTAATAACG 57.813 29.630 0.00 0.00 0.00 3.18
2067 2481 4.764172 TGCAGTTTACCATTTTTGCTTGT 58.236 34.783 0.00 0.00 33.00 3.16
2068 2482 5.731599 TTGCAGTTTACCATTTTTGCTTG 57.268 34.783 0.00 0.00 33.00 4.01
2069 2483 5.065859 GGTTTGCAGTTTACCATTTTTGCTT 59.934 36.000 4.96 0.00 33.00 3.91
2070 2484 4.574421 GGTTTGCAGTTTACCATTTTTGCT 59.426 37.500 4.96 0.00 33.00 3.91
2071 2485 4.574421 AGGTTTGCAGTTTACCATTTTTGC 59.426 37.500 10.67 0.00 34.32 3.68
2074 2488 5.600898 AGGTAGGTTTGCAGTTTACCATTTT 59.399 36.000 16.25 0.41 36.96 1.82
2080 2494 4.152938 CGGTAAGGTAGGTTTGCAGTTTAC 59.847 45.833 0.00 0.00 0.00 2.01
2081 2495 4.040217 TCGGTAAGGTAGGTTTGCAGTTTA 59.960 41.667 0.00 0.00 0.00 2.01
2085 2499 2.028385 AGTCGGTAAGGTAGGTTTGCAG 60.028 50.000 0.00 0.00 0.00 4.41
2087 2501 2.740447 CAAGTCGGTAAGGTAGGTTTGC 59.260 50.000 0.00 0.00 0.00 3.68
2088 2502 4.261578 TCAAGTCGGTAAGGTAGGTTTG 57.738 45.455 0.00 0.00 0.00 2.93
2093 2507 4.508124 GCATTGATCAAGTCGGTAAGGTAG 59.492 45.833 14.54 0.00 0.00 3.18
2094 2508 4.439057 GCATTGATCAAGTCGGTAAGGTA 58.561 43.478 14.54 0.00 0.00 3.08
2095 2509 3.270877 GCATTGATCAAGTCGGTAAGGT 58.729 45.455 14.54 0.00 0.00 3.50
2096 2510 2.614057 GGCATTGATCAAGTCGGTAAGG 59.386 50.000 14.54 0.00 0.00 2.69
2097 2511 2.614057 GGGCATTGATCAAGTCGGTAAG 59.386 50.000 14.54 0.00 0.00 2.34
2099 2513 1.134220 GGGGCATTGATCAAGTCGGTA 60.134 52.381 14.54 0.00 0.00 4.02
2101 2515 0.107017 AGGGGCATTGATCAAGTCGG 60.107 55.000 14.54 4.76 0.00 4.79
2102 2516 2.158900 ACTAGGGGCATTGATCAAGTCG 60.159 50.000 14.54 6.15 0.00 4.18
2103 2517 3.567478 ACTAGGGGCATTGATCAAGTC 57.433 47.619 14.54 7.52 0.00 3.01
2106 2520 3.627237 GGGAAACTAGGGGCATTGATCAA 60.627 47.826 11.26 11.26 0.00 2.57
2107 2521 2.091885 GGGAAACTAGGGGCATTGATCA 60.092 50.000 0.00 0.00 0.00 2.92
2108 2522 2.091885 TGGGAAACTAGGGGCATTGATC 60.092 50.000 0.00 0.00 0.00 2.92
2109 2523 1.929494 TGGGAAACTAGGGGCATTGAT 59.071 47.619 0.00 0.00 0.00 2.57
2111 2525 1.005924 AGTGGGAAACTAGGGGCATTG 59.994 52.381 0.00 0.00 37.36 2.82
2112 2526 1.382914 AGTGGGAAACTAGGGGCATT 58.617 50.000 0.00 0.00 37.36 3.56
2114 2528 2.047769 TTAGTGGGAAACTAGGGGCA 57.952 50.000 0.00 0.00 42.38 5.36
2115 2529 2.158652 GGATTAGTGGGAAACTAGGGGC 60.159 54.545 0.00 0.00 42.38 5.80
2116 2530 3.118000 GTGGATTAGTGGGAAACTAGGGG 60.118 52.174 0.00 0.00 42.38 4.79
2117 2531 3.118000 GGTGGATTAGTGGGAAACTAGGG 60.118 52.174 0.00 0.00 42.38 3.53
2118 2532 3.780850 AGGTGGATTAGTGGGAAACTAGG 59.219 47.826 0.00 0.00 42.38 3.02
2119 2533 4.141688 GGAGGTGGATTAGTGGGAAACTAG 60.142 50.000 0.00 0.00 42.38 2.57
2120 2534 3.778629 GGAGGTGGATTAGTGGGAAACTA 59.221 47.826 0.00 0.00 40.56 2.24
2121 2535 2.576648 GGAGGTGGATTAGTGGGAAACT 59.423 50.000 0.00 0.00 43.40 2.66
2122 2536 2.576648 AGGAGGTGGATTAGTGGGAAAC 59.423 50.000 0.00 0.00 0.00 2.78
2123 2537 2.844348 GAGGAGGTGGATTAGTGGGAAA 59.156 50.000 0.00 0.00 0.00 3.13
2124 2538 2.478292 GAGGAGGTGGATTAGTGGGAA 58.522 52.381 0.00 0.00 0.00 3.97
2126 2540 1.132500 GGAGGAGGTGGATTAGTGGG 58.868 60.000 0.00 0.00 0.00 4.61
2127 2541 1.132500 GGGAGGAGGTGGATTAGTGG 58.868 60.000 0.00 0.00 0.00 4.00
2131 2545 0.754217 CGACGGGAGGAGGTGGATTA 60.754 60.000 0.00 0.00 0.00 1.75
2133 2547 2.442272 CGACGGGAGGAGGTGGAT 60.442 66.667 0.00 0.00 0.00 3.41
2139 2553 1.682451 TAAATGGCCGACGGGAGGAG 61.682 60.000 17.22 0.00 34.06 3.69
2144 2558 1.602377 GAAGAATAAATGGCCGACGGG 59.398 52.381 17.22 0.00 0.00 5.28
2146 2560 3.194861 TCAGAAGAATAAATGGCCGACG 58.805 45.455 0.00 0.00 0.00 5.12
2147 2561 4.555511 GCATCAGAAGAATAAATGGCCGAC 60.556 45.833 0.00 0.00 0.00 4.79
2150 2689 4.924305 TGCATCAGAAGAATAAATGGCC 57.076 40.909 0.00 0.00 0.00 5.36
2163 2702 0.798159 GAACACGCACATGCATCAGA 59.202 50.000 0.00 0.00 42.21 3.27
2166 2705 0.798159 TCAGAACACGCACATGCATC 59.202 50.000 0.00 0.00 42.21 3.91
2172 2711 1.396648 CTGTTTGTCAGAACACGCACA 59.603 47.619 0.00 0.00 46.27 4.57
2177 2716 1.261619 CCGAGCTGTTTGTCAGAACAC 59.738 52.381 0.00 0.00 46.27 3.32
2182 2721 1.284982 CCGTCCGAGCTGTTTGTCAG 61.285 60.000 0.00 0.00 46.12 3.51
2183 2722 1.300620 CCGTCCGAGCTGTTTGTCA 60.301 57.895 0.00 0.00 0.00 3.58
2185 2724 2.665185 GCCGTCCGAGCTGTTTGT 60.665 61.111 0.00 0.00 0.00 2.83
2268 2810 0.940833 TGTGAAATGCGTCGCTTCAA 59.059 45.000 19.68 10.21 31.21 2.69
2276 2818 1.068333 GGCAGATGTTGTGAAATGCGT 60.068 47.619 0.00 0.00 34.54 5.24
2291 2833 2.032528 CTCGCTGGTTTGGGCAGA 59.967 61.111 0.00 0.00 0.00 4.26
2303 2845 2.892425 GCAACATAGGCGCTCGCT 60.892 61.111 7.64 0.00 41.60 4.93
2318 2860 2.359169 GGACAGGGACGAGATGGCA 61.359 63.158 0.00 0.00 0.00 4.92
2334 2876 1.141665 CGATGATGCACGTCCAGGA 59.858 57.895 0.00 0.00 0.00 3.86
2349 2891 4.514577 CGACGCCTTGGCCTCGAT 62.515 66.667 22.14 0.00 0.00 3.59
2353 2895 4.681978 GTGACGACGCCTTGGCCT 62.682 66.667 3.32 0.00 0.00 5.19
2354 2896 4.980805 TGTGACGACGCCTTGGCC 62.981 66.667 6.02 0.00 0.00 5.36
2361 2903 0.735978 TGGATCATGTGTGACGACGC 60.736 55.000 0.00 0.00 37.14 5.19
2366 2908 3.181517 CGTCATTGTGGATCATGTGTGAC 60.182 47.826 0.00 2.66 37.14 3.67
2395 2937 1.446099 GCGTGCACGATCAGGAAGA 60.446 57.895 41.19 0.00 43.02 2.87
2400 2942 3.545481 GTCCGCGTGCACGATCAG 61.545 66.667 41.19 26.08 43.02 2.90
2448 2990 2.084546 GTTCCCGAAGAATCCCACTTG 58.915 52.381 0.00 0.00 36.69 3.16
2450 2992 1.279271 CAGTTCCCGAAGAATCCCACT 59.721 52.381 0.00 0.00 36.69 4.00
2452 2994 1.003118 CACAGTTCCCGAAGAATCCCA 59.997 52.381 0.00 0.00 36.69 4.37
2456 2998 3.181454 ACTTGACACAGTTCCCGAAGAAT 60.181 43.478 0.00 0.00 36.69 2.40
2567 3109 4.350620 CGGATCGCCTCTTGGATG 57.649 61.111 0.00 0.00 34.57 3.51
2591 3133 3.316573 CTCCCCTGTCGCCTCCAAC 62.317 68.421 0.00 0.00 0.00 3.77
2622 3164 0.555769 TTCAGCACCTCCCCAAAGTT 59.444 50.000 0.00 0.00 0.00 2.66
2672 3214 4.736896 GACGACCCCACCGTGCTC 62.737 72.222 0.00 0.00 40.67 4.26
2693 3235 1.134521 GTCTGGTATGCCATGAACCGA 60.135 52.381 1.83 0.00 45.05 4.69
2705 3247 0.324091 ACCCGAAGTCCGTCTGGTAT 60.324 55.000 0.00 0.00 36.31 2.73
2708 3250 2.261671 CACCCGAAGTCCGTCTGG 59.738 66.667 0.00 0.00 36.31 3.86
2709 3251 2.261671 CCACCCGAAGTCCGTCTG 59.738 66.667 0.00 0.00 36.31 3.51
2789 3331 4.785453 CTGCCGTCCCTTGCTCCC 62.785 72.222 0.00 0.00 0.00 4.30
2805 3347 4.363990 CACCGAGACCTGCACGCT 62.364 66.667 0.00 0.00 0.00 5.07
2871 3413 4.425577 AGAATTTCAAGCCGTTGATGAC 57.574 40.909 0.00 0.00 42.41 3.06
2967 3513 7.334921 TCTGAAATTTTACACGGAAATCGGTAT 59.665 33.333 0.00 0.00 44.45 2.73
3006 3552 3.531538 TGAACAGCCTAATCATTCGGTC 58.468 45.455 0.00 0.00 0.00 4.79
3015 3561 4.475016 ACCCTTCACTATGAACAGCCTAAT 59.525 41.667 0.00 0.00 32.21 1.73
3016 3562 3.844211 ACCCTTCACTATGAACAGCCTAA 59.156 43.478 0.00 0.00 32.21 2.69
3017 3563 3.450904 ACCCTTCACTATGAACAGCCTA 58.549 45.455 0.00 0.00 32.21 3.93
3018 3564 2.269940 ACCCTTCACTATGAACAGCCT 58.730 47.619 0.00 0.00 32.21 4.58
3019 3565 2.789409 ACCCTTCACTATGAACAGCC 57.211 50.000 0.00 0.00 32.21 4.85
3020 3566 5.023533 TGATACCCTTCACTATGAACAGC 57.976 43.478 0.00 0.00 32.21 4.40
3136 3682 3.410508 TGCTACTTTGTGTCATGCATGA 58.589 40.909 25.42 25.42 0.00 3.07
3137 3683 3.835378 TGCTACTTTGTGTCATGCATG 57.165 42.857 21.07 21.07 0.00 4.06
3138 3684 5.415389 TGTTATGCTACTTTGTGTCATGCAT 59.585 36.000 0.00 0.00 40.50 3.96
3139 3685 4.759183 TGTTATGCTACTTTGTGTCATGCA 59.241 37.500 0.00 0.00 35.34 3.96
3140 3686 5.295431 TGTTATGCTACTTTGTGTCATGC 57.705 39.130 0.00 0.00 0.00 4.06
3141 3687 9.838975 TTAAATGTTATGCTACTTTGTGTCATG 57.161 29.630 0.00 0.00 0.00 3.07
3142 3688 9.840427 GTTAAATGTTATGCTACTTTGTGTCAT 57.160 29.630 0.00 0.00 0.00 3.06
3143 3689 8.841300 TGTTAAATGTTATGCTACTTTGTGTCA 58.159 29.630 0.00 0.00 0.00 3.58
3144 3690 9.840427 ATGTTAAATGTTATGCTACTTTGTGTC 57.160 29.630 0.00 0.00 0.00 3.67
3145 3691 9.840427 GATGTTAAATGTTATGCTACTTTGTGT 57.160 29.630 0.00 0.00 0.00 3.72
3146 3692 9.838975 TGATGTTAAATGTTATGCTACTTTGTG 57.161 29.630 0.00 0.00 0.00 3.33
3179 3725 9.950496 CAGAGGGTTAAAGCAATATATGTAGAT 57.050 33.333 0.00 0.00 0.00 1.98
3180 3726 8.934697 ACAGAGGGTTAAAGCAATATATGTAGA 58.065 33.333 0.00 0.00 0.00 2.59
3181 3727 9.209175 GACAGAGGGTTAAAGCAATATATGTAG 57.791 37.037 0.00 0.00 0.00 2.74
3182 3728 8.934697 AGACAGAGGGTTAAAGCAATATATGTA 58.065 33.333 0.00 0.00 0.00 2.29
3183 3729 7.806180 AGACAGAGGGTTAAAGCAATATATGT 58.194 34.615 0.00 0.00 0.00 2.29
3184 3730 8.153550 AGAGACAGAGGGTTAAAGCAATATATG 58.846 37.037 0.00 0.00 0.00 1.78
3185 3731 8.268878 AGAGACAGAGGGTTAAAGCAATATAT 57.731 34.615 0.00 0.00 0.00 0.86
3186 3732 7.676683 AGAGACAGAGGGTTAAAGCAATATA 57.323 36.000 0.00 0.00 0.00 0.86
3187 3733 6.567602 AGAGACAGAGGGTTAAAGCAATAT 57.432 37.500 0.00 0.00 0.00 1.28
3188 3734 6.213600 AGAAGAGACAGAGGGTTAAAGCAATA 59.786 38.462 0.00 0.00 0.00 1.90
3189 3735 4.917906 AGAGACAGAGGGTTAAAGCAAT 57.082 40.909 0.00 0.00 0.00 3.56
3190 3736 4.348168 AGAAGAGACAGAGGGTTAAAGCAA 59.652 41.667 0.00 0.00 0.00 3.91
3191 3737 3.904339 AGAAGAGACAGAGGGTTAAAGCA 59.096 43.478 0.00 0.00 0.00 3.91
3192 3738 4.545208 AGAAGAGACAGAGGGTTAAAGC 57.455 45.455 0.00 0.00 0.00 3.51
3193 3739 9.508642 AATTAAAGAAGAGACAGAGGGTTAAAG 57.491 33.333 0.00 0.00 0.00 1.85
3194 3740 9.284968 CAATTAAAGAAGAGACAGAGGGTTAAA 57.715 33.333 0.00 0.00 0.00 1.52
3195 3741 8.437575 ACAATTAAAGAAGAGACAGAGGGTTAA 58.562 33.333 0.00 0.00 0.00 2.01
3196 3742 7.974504 ACAATTAAAGAAGAGACAGAGGGTTA 58.025 34.615 0.00 0.00 0.00 2.85
3197 3743 6.842676 ACAATTAAAGAAGAGACAGAGGGTT 58.157 36.000 0.00 0.00 0.00 4.11
3198 3744 6.271159 AGACAATTAAAGAAGAGACAGAGGGT 59.729 38.462 0.00 0.00 0.00 4.34
3199 3745 6.593382 CAGACAATTAAAGAAGAGACAGAGGG 59.407 42.308 0.00 0.00 0.00 4.30
3200 3746 6.091986 GCAGACAATTAAAGAAGAGACAGAGG 59.908 42.308 0.00 0.00 0.00 3.69
3201 3747 6.873076 AGCAGACAATTAAAGAAGAGACAGAG 59.127 38.462 0.00 0.00 0.00 3.35
3202 3748 6.763355 AGCAGACAATTAAAGAAGAGACAGA 58.237 36.000 0.00 0.00 0.00 3.41
3203 3749 7.600375 TGTAGCAGACAATTAAAGAAGAGACAG 59.400 37.037 0.00 0.00 34.15 3.51
3204 3750 7.441836 TGTAGCAGACAATTAAAGAAGAGACA 58.558 34.615 0.00 0.00 34.15 3.41
3205 3751 7.891183 TGTAGCAGACAATTAAAGAAGAGAC 57.109 36.000 0.00 0.00 34.15 3.36
3208 3754 9.383519 CCTTATGTAGCAGACAATTAAAGAAGA 57.616 33.333 0.00 0.00 42.78 2.87
3209 3755 9.167311 ACCTTATGTAGCAGACAATTAAAGAAG 57.833 33.333 0.00 0.00 42.78 2.85
3210 3756 9.515226 AACCTTATGTAGCAGACAATTAAAGAA 57.485 29.630 0.00 0.00 42.78 2.52
3211 3757 9.515226 AAACCTTATGTAGCAGACAATTAAAGA 57.485 29.630 0.00 0.00 42.78 2.52
3212 3758 9.559958 CAAACCTTATGTAGCAGACAATTAAAG 57.440 33.333 0.00 0.00 42.78 1.85
3213 3759 8.026607 GCAAACCTTATGTAGCAGACAATTAAA 58.973 33.333 0.00 0.00 42.78 1.52
3214 3760 7.393234 AGCAAACCTTATGTAGCAGACAATTAA 59.607 33.333 0.00 0.00 42.78 1.40
3215 3761 6.884295 AGCAAACCTTATGTAGCAGACAATTA 59.116 34.615 0.00 0.00 42.78 1.40
3216 3762 5.711976 AGCAAACCTTATGTAGCAGACAATT 59.288 36.000 0.00 0.00 42.78 2.32
3217 3763 5.256474 AGCAAACCTTATGTAGCAGACAAT 58.744 37.500 0.00 0.00 42.78 2.71
3218 3764 4.651778 AGCAAACCTTATGTAGCAGACAA 58.348 39.130 0.00 0.00 42.78 3.18
3219 3765 4.286297 AGCAAACCTTATGTAGCAGACA 57.714 40.909 0.00 0.00 43.97 3.41
3220 3766 5.420409 ACTAGCAAACCTTATGTAGCAGAC 58.580 41.667 0.00 0.00 32.26 3.51
3221 3767 5.395324 GGACTAGCAAACCTTATGTAGCAGA 60.395 44.000 0.00 0.00 32.26 4.26
3222 3768 4.811557 GGACTAGCAAACCTTATGTAGCAG 59.188 45.833 0.00 0.00 32.26 4.24
3223 3769 4.383770 GGGACTAGCAAACCTTATGTAGCA 60.384 45.833 0.00 0.00 32.26 3.49
3224 3770 4.127907 GGGACTAGCAAACCTTATGTAGC 58.872 47.826 0.00 0.00 0.00 3.58
3225 3771 5.353394 TGGGACTAGCAAACCTTATGTAG 57.647 43.478 0.00 0.00 0.00 2.74
3226 3772 5.249852 ACTTGGGACTAGCAAACCTTATGTA 59.750 40.000 0.00 0.00 0.00 2.29
3227 3773 4.042934 ACTTGGGACTAGCAAACCTTATGT 59.957 41.667 0.00 0.00 0.00 2.29
3228 3774 4.396166 CACTTGGGACTAGCAAACCTTATG 59.604 45.833 0.00 0.00 0.00 1.90
3229 3775 4.042934 ACACTTGGGACTAGCAAACCTTAT 59.957 41.667 0.00 0.00 0.00 1.73
3230 3776 3.393278 ACACTTGGGACTAGCAAACCTTA 59.607 43.478 0.00 0.00 0.00 2.69
3231 3777 2.174854 ACACTTGGGACTAGCAAACCTT 59.825 45.455 0.00 0.00 0.00 3.50
3232 3778 1.774856 ACACTTGGGACTAGCAAACCT 59.225 47.619 0.00 0.00 0.00 3.50
3233 3779 2.271944 ACACTTGGGACTAGCAAACC 57.728 50.000 0.00 0.00 0.00 3.27
3234 3780 4.575885 TCATACACTTGGGACTAGCAAAC 58.424 43.478 0.00 0.00 0.00 2.93
3235 3781 4.901197 TCATACACTTGGGACTAGCAAA 57.099 40.909 0.00 0.00 0.00 3.68
3236 3782 5.163343 GGTATCATACACTTGGGACTAGCAA 60.163 44.000 0.00 0.00 0.00 3.91
3237 3783 4.344102 GGTATCATACACTTGGGACTAGCA 59.656 45.833 0.00 0.00 0.00 3.49
3238 3784 4.558898 CGGTATCATACACTTGGGACTAGC 60.559 50.000 0.00 0.00 0.00 3.42
3239 3785 4.022242 CCGGTATCATACACTTGGGACTAG 60.022 50.000 0.00 0.00 0.00 2.57
3240 3786 3.893200 CCGGTATCATACACTTGGGACTA 59.107 47.826 0.00 0.00 0.00 2.59
3241 3787 2.698797 CCGGTATCATACACTTGGGACT 59.301 50.000 0.00 0.00 0.00 3.85
3242 3788 2.433239 ACCGGTATCATACACTTGGGAC 59.567 50.000 4.49 0.00 0.00 4.46
3243 3789 2.754465 ACCGGTATCATACACTTGGGA 58.246 47.619 4.49 0.00 0.00 4.37
3244 3790 3.553828 AACCGGTATCATACACTTGGG 57.446 47.619 8.00 0.00 0.00 4.12
3245 3791 5.667466 ACTTAACCGGTATCATACACTTGG 58.333 41.667 8.00 0.00 0.00 3.61
3246 3792 8.882415 ATAACTTAACCGGTATCATACACTTG 57.118 34.615 8.00 0.00 0.00 3.16
3247 3793 8.921205 AGATAACTTAACCGGTATCATACACTT 58.079 33.333 8.00 0.00 0.00 3.16
3248 3794 8.474710 AGATAACTTAACCGGTATCATACACT 57.525 34.615 8.00 0.00 0.00 3.55
3249 3795 7.811713 GGAGATAACTTAACCGGTATCATACAC 59.188 40.741 8.00 0.00 0.00 2.90
3250 3796 7.506599 TGGAGATAACTTAACCGGTATCATACA 59.493 37.037 8.00 3.93 0.00 2.29
3251 3797 7.811713 GTGGAGATAACTTAACCGGTATCATAC 59.188 40.741 8.00 3.23 0.00 2.39
3252 3798 7.727186 AGTGGAGATAACTTAACCGGTATCATA 59.273 37.037 8.00 0.00 0.00 2.15
3253 3799 6.553852 AGTGGAGATAACTTAACCGGTATCAT 59.446 38.462 8.00 0.00 0.00 2.45
3254 3800 5.895534 AGTGGAGATAACTTAACCGGTATCA 59.104 40.000 8.00 0.00 0.00 2.15
3255 3801 6.402456 AGTGGAGATAACTTAACCGGTATC 57.598 41.667 8.00 6.03 0.00 2.24
3256 3802 7.065504 AGTAGTGGAGATAACTTAACCGGTAT 58.934 38.462 8.00 0.00 0.00 2.73
3257 3803 6.426587 AGTAGTGGAGATAACTTAACCGGTA 58.573 40.000 8.00 0.00 0.00 4.02
3258 3804 5.267587 AGTAGTGGAGATAACTTAACCGGT 58.732 41.667 0.00 0.00 0.00 5.28
3259 3805 5.848833 AGTAGTGGAGATAACTTAACCGG 57.151 43.478 0.00 0.00 0.00 5.28
3260 3806 7.798596 TCTAGTAGTGGAGATAACTTAACCG 57.201 40.000 0.00 0.00 0.00 4.44
3261 3807 8.964772 TGTTCTAGTAGTGGAGATAACTTAACC 58.035 37.037 0.00 0.00 0.00 2.85
3268 3814 9.463902 GCCTATATGTTCTAGTAGTGGAGATAA 57.536 37.037 0.00 0.00 0.00 1.75
3269 3815 7.769507 CGCCTATATGTTCTAGTAGTGGAGATA 59.230 40.741 0.00 0.00 0.00 1.98
3270 3816 6.600032 CGCCTATATGTTCTAGTAGTGGAGAT 59.400 42.308 0.00 0.00 0.00 2.75
3271 3817 5.938710 CGCCTATATGTTCTAGTAGTGGAGA 59.061 44.000 0.00 0.00 0.00 3.71
3272 3818 5.392165 GCGCCTATATGTTCTAGTAGTGGAG 60.392 48.000 0.00 0.00 0.00 3.86
3273 3819 4.458295 GCGCCTATATGTTCTAGTAGTGGA 59.542 45.833 0.00 0.00 0.00 4.02
3274 3820 4.672024 CGCGCCTATATGTTCTAGTAGTGG 60.672 50.000 0.00 0.00 0.00 4.00
3275 3821 4.404324 CGCGCCTATATGTTCTAGTAGTG 58.596 47.826 0.00 0.00 0.00 2.74
3276 3822 3.119919 GCGCGCCTATATGTTCTAGTAGT 60.120 47.826 23.24 0.00 0.00 2.73
3406 3955 5.382664 ACCTTTGTCTCTTGGACCTAAAA 57.617 39.130 0.00 0.00 43.89 1.52
3442 3991 1.073763 TGTGGTGTGATCCCTCCAAAG 59.926 52.381 0.24 0.00 0.00 2.77
3652 5463 6.207417 ACACCCATTAATTTTGACTCTCACTG 59.793 38.462 0.00 0.00 0.00 3.66
3697 5508 8.679344 TCCTAAGTAATATATTCTCATGGGCA 57.321 34.615 0.00 0.00 0.00 5.36
3774 5589 5.187186 TCAAGATCTACACCAGTAACTTCCC 59.813 44.000 0.00 0.00 0.00 3.97
3850 5665 7.612244 TGACAAATCTGGTTCCCGAAAATAATA 59.388 33.333 0.00 0.00 0.00 0.98


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.