Multiple sequence alignment - TraesCS4A01G394100
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS4A01G394100 | chr4A | 100.000 | 7846 | 0 | 0 | 1 | 7846 | 669447440 | 669439595 | 0.000000e+00 | 14489.0 |
1 | TraesCS4A01G394100 | chr4A | 92.688 | 506 | 34 | 2 | 7193 | 7696 | 629954635 | 629954131 | 0.000000e+00 | 726.0 |
2 | TraesCS4A01G394100 | chr4A | 92.688 | 506 | 34 | 2 | 7193 | 7696 | 629963593 | 629963089 | 0.000000e+00 | 726.0 |
3 | TraesCS4A01G394100 | chr4A | 82.946 | 387 | 52 | 8 | 5551 | 5936 | 545870659 | 545870286 | 3.510000e-88 | 337.0 |
4 | TraesCS4A01G394100 | chr4A | 82.687 | 387 | 56 | 7 | 5551 | 5936 | 545772870 | 545772494 | 4.540000e-87 | 333.0 |
5 | TraesCS4A01G394100 | chr4A | 85.526 | 304 | 42 | 2 | 6527 | 6829 | 545770667 | 545770365 | 4.570000e-82 | 316.0 |
6 | TraesCS4A01G394100 | chr4A | 83.601 | 311 | 48 | 2 | 6522 | 6829 | 656783516 | 656783206 | 9.960000e-74 | 289.0 |
7 | TraesCS4A01G394100 | chr4A | 86.325 | 234 | 28 | 3 | 3012 | 3245 | 545873413 | 545873184 | 1.310000e-62 | 252.0 |
8 | TraesCS4A01G394100 | chr4A | 85.532 | 235 | 30 | 3 | 3012 | 3245 | 545775665 | 545775434 | 7.870000e-60 | 243.0 |
9 | TraesCS4A01G394100 | chr4A | 80.443 | 271 | 44 | 7 | 6041 | 6304 | 545772422 | 545772154 | 1.730000e-46 | 198.0 |
10 | TraesCS4A01G394100 | chr4A | 80.220 | 273 | 41 | 11 | 6041 | 6304 | 545870214 | 545869946 | 8.030000e-45 | 193.0 |
11 | TraesCS4A01G394100 | chr4A | 84.571 | 175 | 25 | 2 | 4761 | 4934 | 656789582 | 656789409 | 1.050000e-38 | 172.0 |
12 | TraesCS4A01G394100 | chr4A | 81.347 | 193 | 34 | 2 | 4762 | 4953 | 545773683 | 545773492 | 1.050000e-33 | 156.0 |
13 | TraesCS4A01G394100 | chr4A | 93.023 | 86 | 6 | 0 | 7761 | 7846 | 735481823 | 735481908 | 8.270000e-25 | 126.0 |
14 | TraesCS4A01G394100 | chr7A | 94.036 | 4678 | 196 | 29 | 1767 | 6420 | 21190985 | 21186367 | 0.000000e+00 | 7016.0 |
15 | TraesCS4A01G394100 | chr7A | 95.918 | 441 | 18 | 0 | 6496 | 6936 | 21186098 | 21185658 | 0.000000e+00 | 715.0 |
16 | TraesCS4A01G394100 | chr7A | 85.689 | 559 | 48 | 24 | 961 | 1510 | 21191509 | 21190974 | 1.910000e-155 | 560.0 |
17 | TraesCS4A01G394100 | chr7A | 93.727 | 271 | 13 | 4 | 6922 | 7191 | 21185475 | 21185208 | 3.410000e-108 | 403.0 |
18 | TraesCS4A01G394100 | chr7A | 84.000 | 175 | 26 | 2 | 4761 | 4934 | 47457109 | 47456936 | 4.870000e-37 | 167.0 |
19 | TraesCS4A01G394100 | chr7A | 91.176 | 102 | 9 | 0 | 6527 | 6628 | 47455378 | 47455277 | 1.060000e-28 | 139.0 |
20 | TraesCS4A01G394100 | chr7A | 93.976 | 83 | 5 | 0 | 7694 | 7776 | 21185223 | 21185141 | 8.270000e-25 | 126.0 |
21 | TraesCS4A01G394100 | chrUn | 99.684 | 949 | 3 | 0 | 17 | 965 | 422238055 | 422239003 | 0.000000e+00 | 1736.0 |
22 | TraesCS4A01G394100 | chrUn | 92.688 | 506 | 34 | 2 | 7193 | 7696 | 276675799 | 276676303 | 0.000000e+00 | 726.0 |
23 | TraesCS4A01G394100 | chrUn | 93.111 | 450 | 31 | 0 | 7191 | 7640 | 111229521 | 111229970 | 0.000000e+00 | 660.0 |
24 | TraesCS4A01G394100 | chrUn | 83.923 | 311 | 47 | 2 | 6522 | 6829 | 231458663 | 231458973 | 2.140000e-75 | 294.0 |
25 | TraesCS4A01G394100 | chrUn | 83.601 | 311 | 48 | 2 | 6522 | 6829 | 275535900 | 275536210 | 9.960000e-74 | 289.0 |
26 | TraesCS4A01G394100 | chrUn | 84.571 | 175 | 25 | 2 | 4761 | 4934 | 231452596 | 231452769 | 1.050000e-38 | 172.0 |
27 | TraesCS4A01G394100 | chrUn | 95.122 | 82 | 3 | 1 | 7765 | 7846 | 67389393 | 67389313 | 2.300000e-25 | 128.0 |
28 | TraesCS4A01G394100 | chr1A | 80.062 | 1625 | 249 | 49 | 3372 | 4950 | 7660807 | 7659212 | 0.000000e+00 | 1136.0 |
29 | TraesCS4A01G394100 | chr1A | 83.105 | 438 | 67 | 5 | 2370 | 2801 | 7662306 | 7661870 | 7.380000e-105 | 392.0 |
30 | TraesCS4A01G394100 | chr1A | 92.453 | 53 | 4 | 0 | 5787 | 5839 | 7520302 | 7520250 | 8.440000e-10 | 76.8 |
31 | TraesCS4A01G394100 | chr1B | 79.650 | 1602 | 255 | 49 | 3369 | 4950 | 8674323 | 8675873 | 0.000000e+00 | 1086.0 |
32 | TraesCS4A01G394100 | chr1B | 96.831 | 284 | 9 | 0 | 1 | 284 | 9242094 | 9241811 | 7.120000e-130 | 475.0 |
33 | TraesCS4A01G394100 | chr1B | 82.648 | 438 | 69 | 5 | 2370 | 2801 | 8673446 | 8673882 | 1.600000e-101 | 381.0 |
34 | TraesCS4A01G394100 | chr1B | 75.688 | 218 | 45 | 8 | 440 | 653 | 625540577 | 625540790 | 1.390000e-17 | 102.0 |
35 | TraesCS4A01G394100 | chr1B | 97.368 | 38 | 1 | 0 | 6532 | 6569 | 548189089 | 548189126 | 1.830000e-06 | 65.8 |
36 | TraesCS4A01G394100 | chr6D | 95.635 | 504 | 22 | 0 | 7191 | 7694 | 12542232 | 12542735 | 0.000000e+00 | 809.0 |
37 | TraesCS4A01G394100 | chr6D | 91.923 | 260 | 18 | 3 | 1511 | 1769 | 33250828 | 33250571 | 2.080000e-95 | 361.0 |
38 | TraesCS4A01G394100 | chr6D | 91.923 | 260 | 18 | 3 | 1511 | 1769 | 431064308 | 431064565 | 2.080000e-95 | 361.0 |
39 | TraesCS4A01G394100 | chr2A | 94.643 | 504 | 27 | 0 | 7191 | 7694 | 374736195 | 374735692 | 0.000000e+00 | 782.0 |
40 | TraesCS4A01G394100 | chr2A | 97.500 | 280 | 6 | 1 | 2 | 281 | 398737549 | 398737827 | 1.980000e-130 | 477.0 |
41 | TraesCS4A01G394100 | chr1D | 83.663 | 808 | 115 | 15 | 3399 | 4202 | 6335466 | 6334672 | 0.000000e+00 | 745.0 |
42 | TraesCS4A01G394100 | chr1D | 82.339 | 436 | 69 | 6 | 2373 | 2801 | 6337085 | 6336651 | 9.620000e-99 | 372.0 |
43 | TraesCS4A01G394100 | chr1D | 97.368 | 38 | 1 | 0 | 6532 | 6569 | 407668139 | 407668176 | 1.830000e-06 | 65.8 |
44 | TraesCS4A01G394100 | chr5B | 78.530 | 1211 | 203 | 42 | 3019 | 4195 | 611647575 | 611646388 | 0.000000e+00 | 743.0 |
45 | TraesCS4A01G394100 | chr5B | 96.842 | 285 | 8 | 1 | 1 | 285 | 165949812 | 165949529 | 7.120000e-130 | 475.0 |
46 | TraesCS4A01G394100 | chr5B | 95.918 | 294 | 11 | 1 | 1 | 294 | 213137136 | 213136844 | 7.120000e-130 | 475.0 |
47 | TraesCS4A01G394100 | chr5B | 96.528 | 288 | 7 | 1 | 1 | 285 | 165545308 | 165545021 | 2.560000e-129 | 473.0 |
48 | TraesCS4A01G394100 | chr5B | 79.899 | 398 | 76 | 4 | 4245 | 4641 | 611644897 | 611644503 | 9.960000e-74 | 289.0 |
49 | TraesCS4A01G394100 | chr5B | 82.723 | 191 | 29 | 4 | 4761 | 4949 | 611643844 | 611643656 | 4.870000e-37 | 167.0 |
50 | TraesCS4A01G394100 | chr5B | 92.473 | 93 | 5 | 2 | 7756 | 7846 | 314576050 | 314576142 | 1.780000e-26 | 132.0 |
51 | TraesCS4A01G394100 | chr5B | 91.304 | 92 | 5 | 2 | 7757 | 7846 | 664946350 | 664946440 | 1.070000e-23 | 122.0 |
52 | TraesCS4A01G394100 | chr5B | 76.684 | 193 | 38 | 6 | 462 | 653 | 592363802 | 592363616 | 5.010000e-17 | 100.0 |
53 | TraesCS4A01G394100 | chr5D | 95.085 | 468 | 23 | 0 | 7191 | 7658 | 488175622 | 488175155 | 0.000000e+00 | 737.0 |
54 | TraesCS4A01G394100 | chr5D | 92.717 | 508 | 33 | 2 | 7189 | 7696 | 377315983 | 377316486 | 0.000000e+00 | 730.0 |
55 | TraesCS4A01G394100 | chr5D | 91.923 | 260 | 18 | 3 | 1511 | 1769 | 21677060 | 21676803 | 2.080000e-95 | 361.0 |
56 | TraesCS4A01G394100 | chr5D | 91.571 | 261 | 20 | 2 | 1510 | 1769 | 505431512 | 505431253 | 7.490000e-95 | 359.0 |
57 | TraesCS4A01G394100 | chr5D | 87.719 | 57 | 7 | 0 | 6126 | 6182 | 495561125 | 495561181 | 5.080000e-07 | 67.6 |
58 | TraesCS4A01G394100 | chr3B | 79.638 | 938 | 151 | 23 | 3027 | 3933 | 764079587 | 764080515 | 8.590000e-179 | 638.0 |
59 | TraesCS4A01G394100 | chr3B | 96.875 | 288 | 9 | 0 | 1 | 288 | 511089503 | 511089790 | 4.260000e-132 | 483.0 |
60 | TraesCS4A01G394100 | chr3B | 84.300 | 293 | 45 | 1 | 4350 | 4641 | 463095450 | 463095742 | 1.290000e-72 | 285.0 |
61 | TraesCS4A01G394100 | chr3B | 87.500 | 168 | 19 | 2 | 4036 | 4203 | 764080588 | 764080753 | 8.030000e-45 | 193.0 |
62 | TraesCS4A01G394100 | chr3B | 77.027 | 296 | 68 | 0 | 6536 | 6831 | 463097362 | 463097657 | 3.760000e-38 | 171.0 |
63 | TraesCS4A01G394100 | chr3B | 98.837 | 86 | 1 | 0 | 7190 | 7275 | 174246647 | 174246562 | 3.790000e-33 | 154.0 |
64 | TraesCS4A01G394100 | chr3B | 98.667 | 75 | 1 | 0 | 7772 | 7846 | 461200576 | 461200502 | 4.940000e-27 | 134.0 |
65 | TraesCS4A01G394100 | chr3B | 94.186 | 86 | 3 | 2 | 7762 | 7846 | 156649980 | 156649896 | 6.390000e-26 | 130.0 |
66 | TraesCS4A01G394100 | chr3B | 87.037 | 108 | 10 | 4 | 7739 | 7846 | 178399056 | 178399159 | 1.380000e-22 | 119.0 |
67 | TraesCS4A01G394100 | chr4D | 81.141 | 806 | 123 | 17 | 3396 | 4196 | 51003178 | 51002397 | 3.110000e-173 | 619.0 |
68 | TraesCS4A01G394100 | chr4D | 89.286 | 504 | 30 | 14 | 7191 | 7694 | 497530480 | 497530959 | 1.870000e-170 | 610.0 |
69 | TraesCS4A01G394100 | chr4D | 90.780 | 282 | 19 | 7 | 1491 | 1771 | 485489031 | 485489306 | 3.460000e-98 | 370.0 |
70 | TraesCS4A01G394100 | chr4D | 82.216 | 388 | 53 | 9 | 5551 | 5936 | 51000727 | 51000354 | 3.530000e-83 | 320.0 |
71 | TraesCS4A01G394100 | chr4D | 80.443 | 271 | 44 | 7 | 6041 | 6304 | 51000282 | 51000014 | 1.730000e-46 | 198.0 |
72 | TraesCS4A01G394100 | chr4D | 80.526 | 190 | 35 | 2 | 4762 | 4950 | 51001548 | 51001360 | 2.280000e-30 | 145.0 |
73 | TraesCS4A01G394100 | chr4D | 80.000 | 175 | 32 | 2 | 490 | 663 | 113578171 | 113577999 | 8.270000e-25 | 126.0 |
74 | TraesCS4A01G394100 | chr4B | 81.202 | 782 | 120 | 18 | 3419 | 4196 | 75080009 | 75079251 | 8.710000e-169 | 604.0 |
75 | TraesCS4A01G394100 | chr4B | 96.528 | 288 | 10 | 0 | 1 | 288 | 478757257 | 478756970 | 1.980000e-130 | 477.0 |
76 | TraesCS4A01G394100 | chr4B | 86.325 | 234 | 29 | 2 | 3012 | 3245 | 75080384 | 75080154 | 1.310000e-62 | 252.0 |
77 | TraesCS4A01G394100 | chr4B | 79.259 | 270 | 49 | 5 | 6041 | 6304 | 75077149 | 75076881 | 1.740000e-41 | 182.0 |
78 | TraesCS4A01G394100 | chr4B | 78.531 | 177 | 37 | 1 | 488 | 664 | 632867512 | 632867687 | 1.790000e-21 | 115.0 |
79 | TraesCS4A01G394100 | chr5A | 79.208 | 808 | 147 | 17 | 3399 | 4195 | 619178128 | 619177331 | 6.930000e-150 | 542.0 |
80 | TraesCS4A01G394100 | chr5A | 80.653 | 398 | 72 | 5 | 4245 | 4641 | 619177170 | 619176777 | 3.560000e-78 | 303.0 |
81 | TraesCS4A01G394100 | chr5A | 82.632 | 190 | 33 | 0 | 4761 | 4950 | 619176145 | 619175956 | 1.350000e-37 | 169.0 |
82 | TraesCS4A01G394100 | chr5A | 89.091 | 55 | 6 | 0 | 6126 | 6180 | 619513659 | 619513713 | 1.410000e-07 | 69.4 |
83 | TraesCS4A01G394100 | chr6B | 96.540 | 289 | 10 | 0 | 2 | 290 | 254156931 | 254157219 | 5.510000e-131 | 479.0 |
84 | TraesCS4A01G394100 | chr6B | 91.571 | 261 | 20 | 2 | 1510 | 1769 | 715294015 | 715294274 | 7.490000e-95 | 359.0 |
85 | TraesCS4A01G394100 | chr6B | 95.062 | 81 | 3 | 1 | 7766 | 7846 | 703155005 | 703155084 | 8.270000e-25 | 126.0 |
86 | TraesCS4A01G394100 | chr6B | 89.000 | 100 | 7 | 4 | 7749 | 7846 | 160905115 | 160905212 | 3.850000e-23 | 121.0 |
87 | TraesCS4A01G394100 | chr3A | 81.838 | 457 | 69 | 12 | 2352 | 2798 | 710110926 | 710110474 | 9.620000e-99 | 372.0 |
88 | TraesCS4A01G394100 | chr3A | 84.300 | 293 | 45 | 1 | 4350 | 4641 | 477562707 | 477562999 | 1.290000e-72 | 285.0 |
89 | TraesCS4A01G394100 | chr3A | 79.878 | 328 | 55 | 7 | 3013 | 3336 | 710101937 | 710101617 | 6.120000e-56 | 230.0 |
90 | TraesCS4A01G394100 | chr3A | 86.932 | 176 | 21 | 2 | 4028 | 4203 | 710100836 | 710100663 | 6.210000e-46 | 196.0 |
91 | TraesCS4A01G394100 | chr3A | 77.365 | 296 | 67 | 0 | 6536 | 6831 | 477564619 | 477564914 | 8.090000e-40 | 176.0 |
92 | TraesCS4A01G394100 | chr3A | 78.212 | 179 | 29 | 10 | 2116 | 2290 | 710112497 | 710112325 | 1.080000e-18 | 106.0 |
93 | TraesCS4A01G394100 | chr3A | 95.082 | 61 | 3 | 0 | 6770 | 6830 | 710089791 | 710089731 | 6.480000e-16 | 97.1 |
94 | TraesCS4A01G394100 | chr3D | 92.337 | 261 | 18 | 2 | 1510 | 1769 | 604126815 | 604127074 | 3.460000e-98 | 370.0 |
95 | TraesCS4A01G394100 | chr3D | 92.308 | 260 | 17 | 3 | 1511 | 1769 | 437673628 | 437673371 | 4.470000e-97 | 366.0 |
96 | TraesCS4A01G394100 | chr3D | 91.571 | 261 | 19 | 3 | 1510 | 1769 | 17649650 | 17649908 | 2.690000e-94 | 357.0 |
97 | TraesCS4A01G394100 | chr3D | 91.489 | 47 | 4 | 0 | 6136 | 6182 | 468969651 | 468969605 | 1.830000e-06 | 65.8 |
98 | TraesCS4A01G394100 | chr7D | 83.117 | 308 | 45 | 5 | 6522 | 6824 | 45231861 | 45231556 | 2.790000e-69 | 274.0 |
99 | TraesCS4A01G394100 | chr7D | 85.143 | 175 | 24 | 2 | 4761 | 4934 | 45249521 | 45249348 | 2.250000e-40 | 178.0 |
100 | TraesCS4A01G394100 | chr7D | 86.986 | 146 | 17 | 2 | 5791 | 5935 | 45232476 | 45232332 | 6.300000e-36 | 163.0 |
101 | TraesCS4A01G394100 | chr2B | 97.015 | 134 | 4 | 0 | 7254 | 7387 | 190056557 | 190056424 | 7.920000e-55 | 226.0 |
102 | TraesCS4A01G394100 | chr2B | 78.500 | 200 | 38 | 3 | 455 | 653 | 636653411 | 636653606 | 8.270000e-25 | 126.0 |
103 | TraesCS4A01G394100 | chr2B | 80.702 | 114 | 20 | 2 | 552 | 664 | 767966194 | 767966082 | 3.900000e-13 | 87.9 |
104 | TraesCS4A01G394100 | chr2B | 75.581 | 172 | 41 | 1 | 489 | 660 | 768015471 | 768015301 | 5.050000e-12 | 84.2 |
105 | TraesCS4A01G394100 | chr2D | 80.100 | 201 | 32 | 6 | 455 | 653 | 535289678 | 535289872 | 8.210000e-30 | 143.0 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS4A01G394100 | chr4A | 669439595 | 669447440 | 7845 | True | 14489.000000 | 14489 | 100.000000 | 1 | 7846 | 1 | chr4A.!!$R5 | 7845 |
1 | TraesCS4A01G394100 | chr4A | 629954131 | 629954635 | 504 | True | 726.000000 | 726 | 92.688000 | 7193 | 7696 | 1 | chr4A.!!$R1 | 503 |
2 | TraesCS4A01G394100 | chr4A | 629963089 | 629963593 | 504 | True | 726.000000 | 726 | 92.688000 | 7193 | 7696 | 1 | chr4A.!!$R2 | 503 |
3 | TraesCS4A01G394100 | chr4A | 545869946 | 545873413 | 3467 | True | 260.666667 | 337 | 83.163667 | 3012 | 6304 | 3 | chr4A.!!$R7 | 3292 |
4 | TraesCS4A01G394100 | chr4A | 545770365 | 545775665 | 5300 | True | 249.200000 | 333 | 83.107000 | 3012 | 6829 | 5 | chr4A.!!$R6 | 3817 |
5 | TraesCS4A01G394100 | chr7A | 21185141 | 21191509 | 6368 | True | 1764.000000 | 7016 | 92.669200 | 961 | 7776 | 5 | chr7A.!!$R1 | 6815 |
6 | TraesCS4A01G394100 | chrUn | 422238055 | 422239003 | 948 | False | 1736.000000 | 1736 | 99.684000 | 17 | 965 | 1 | chrUn.!!$F6 | 948 |
7 | TraesCS4A01G394100 | chrUn | 276675799 | 276676303 | 504 | False | 726.000000 | 726 | 92.688000 | 7193 | 7696 | 1 | chrUn.!!$F5 | 503 |
8 | TraesCS4A01G394100 | chr1A | 7659212 | 7662306 | 3094 | True | 764.000000 | 1136 | 81.583500 | 2370 | 4950 | 2 | chr1A.!!$R2 | 2580 |
9 | TraesCS4A01G394100 | chr1B | 8673446 | 8675873 | 2427 | False | 733.500000 | 1086 | 81.149000 | 2370 | 4950 | 2 | chr1B.!!$F3 | 2580 |
10 | TraesCS4A01G394100 | chr6D | 12542232 | 12542735 | 503 | False | 809.000000 | 809 | 95.635000 | 7191 | 7694 | 1 | chr6D.!!$F1 | 503 |
11 | TraesCS4A01G394100 | chr2A | 374735692 | 374736195 | 503 | True | 782.000000 | 782 | 94.643000 | 7191 | 7694 | 1 | chr2A.!!$R1 | 503 |
12 | TraesCS4A01G394100 | chr1D | 6334672 | 6337085 | 2413 | True | 558.500000 | 745 | 83.001000 | 2373 | 4202 | 2 | chr1D.!!$R1 | 1829 |
13 | TraesCS4A01G394100 | chr5B | 611643656 | 611647575 | 3919 | True | 399.666667 | 743 | 80.384000 | 3019 | 4949 | 3 | chr5B.!!$R5 | 1930 |
14 | TraesCS4A01G394100 | chr5D | 377315983 | 377316486 | 503 | False | 730.000000 | 730 | 92.717000 | 7189 | 7696 | 1 | chr5D.!!$F1 | 507 |
15 | TraesCS4A01G394100 | chr3B | 764079587 | 764080753 | 1166 | False | 415.500000 | 638 | 83.569000 | 3027 | 4203 | 2 | chr3B.!!$F4 | 1176 |
16 | TraesCS4A01G394100 | chr3B | 463095450 | 463097657 | 2207 | False | 228.000000 | 285 | 80.663500 | 4350 | 6831 | 2 | chr3B.!!$F3 | 2481 |
17 | TraesCS4A01G394100 | chr4D | 51000014 | 51003178 | 3164 | True | 320.500000 | 619 | 81.081500 | 3396 | 6304 | 4 | chr4D.!!$R2 | 2908 |
18 | TraesCS4A01G394100 | chr4B | 75076881 | 75080384 | 3503 | True | 346.000000 | 604 | 82.262000 | 3012 | 6304 | 3 | chr4B.!!$R2 | 3292 |
19 | TraesCS4A01G394100 | chr5A | 619175956 | 619178128 | 2172 | True | 338.000000 | 542 | 80.831000 | 3399 | 4950 | 3 | chr5A.!!$R1 | 1551 |
20 | TraesCS4A01G394100 | chr3A | 710110474 | 710112497 | 2023 | True | 239.000000 | 372 | 80.025000 | 2116 | 2798 | 2 | chr3A.!!$R3 | 682 |
21 | TraesCS4A01G394100 | chr3A | 477562707 | 477564914 | 2207 | False | 230.500000 | 285 | 80.832500 | 4350 | 6831 | 2 | chr3A.!!$F1 | 2481 |
22 | TraesCS4A01G394100 | chr3A | 710100663 | 710101937 | 1274 | True | 213.000000 | 230 | 83.405000 | 3013 | 4203 | 2 | chr3A.!!$R2 | 1190 |
23 | TraesCS4A01G394100 | chr7D | 45231556 | 45232476 | 920 | True | 218.500000 | 274 | 85.051500 | 5791 | 6824 | 2 | chr7D.!!$R2 | 1033 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
179 | 180 | 0.249699 | CAGTAGCGTGGGTCAACACA | 60.250 | 55.0 | 0.00 | 0.00 | 41.38 | 3.72 | F |
1298 | 1299 | 0.036765 | TTGGCCGCTTGTCGACTTAT | 60.037 | 50.0 | 17.92 | 0.00 | 41.67 | 1.73 | F |
1548 | 1554 | 0.039527 | AGAAACAATTTCACGGCGGC | 60.040 | 50.0 | 13.24 | 0.00 | 42.10 | 6.53 | F |
1757 | 1763 | 0.179029 | ACGGCTATTTTGCGGGCTAT | 60.179 | 50.0 | 0.00 | 0.00 | 37.55 | 2.97 | F |
1814 | 1820 | 0.319555 | TGTGTCTACTGCGACAAGCC | 60.320 | 55.0 | 2.50 | 0.00 | 44.73 | 4.35 | F |
3626 | 5665 | 0.655733 | CGACCAGGTTTGTGTGTGTC | 59.344 | 55.0 | 0.00 | 0.00 | 0.00 | 3.67 | F |
4608 | 8200 | 0.676466 | CACCCTACCTTCGCATGCAA | 60.676 | 55.0 | 19.57 | 10.18 | 0.00 | 4.08 | F |
4817 | 9021 | 0.179032 | TTCTGAACAGGCGGCTTTCA | 60.179 | 50.0 | 24.22 | 24.22 | 0.00 | 2.69 | F |
5414 | 9676 | 0.528466 | TAGATCGCAGCTTCTTGCCG | 60.528 | 55.0 | 0.50 | 0.00 | 44.23 | 5.69 | F |
5606 | 9897 | 0.810031 | ACAAGCTTGTTCGTCGCTGT | 60.810 | 50.0 | 26.36 | 0.00 | 38.47 | 4.40 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1529 | 1535 | 0.039527 | GCCGCCGTGAAATTGTTTCT | 60.040 | 50.000 | 4.32 | 0.0 | 40.32 | 2.52 | R |
2233 | 2259 | 1.414919 | TCCCACTTGTCTAACACGCTT | 59.585 | 47.619 | 0.00 | 0.0 | 0.00 | 4.68 | R |
3509 | 5548 | 1.806623 | GCGTGCGGAGATAGGTTGATT | 60.807 | 52.381 | 0.00 | 0.0 | 0.00 | 2.57 | R |
3945 | 6077 | 5.452078 | CAGGCATAACTGTGAAGGAAAAA | 57.548 | 39.130 | 0.00 | 0.0 | 33.81 | 1.94 | R |
4118 | 6256 | 0.364180 | CATCAACAATTGCAAGCGCG | 59.636 | 50.000 | 4.94 | 0.0 | 42.97 | 6.86 | R |
4817 | 9021 | 0.593128 | GTTTGTGACAATGCCTCGCT | 59.407 | 50.000 | 0.00 | 0.0 | 0.00 | 4.93 | R |
5973 | 10284 | 0.178924 | AAATCCCAACAAGGCCAGCT | 60.179 | 50.000 | 5.01 | 0.0 | 35.39 | 4.24 | R |
6332 | 10660 | 0.671796 | GGGTTTTGGAAGGGAACACG | 59.328 | 55.000 | 0.00 | 0.0 | 0.00 | 4.49 | R |
6572 | 12224 | 0.839946 | AGATACCACCATGACAGCCC | 59.160 | 55.000 | 0.00 | 0.0 | 0.00 | 5.19 | R |
7818 | 13671 | 0.528924 | TGCGCCGTATGTAGTCACTT | 59.471 | 50.000 | 4.18 | 0.0 | 0.00 | 3.16 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
179 | 180 | 0.249699 | CAGTAGCGTGGGTCAACACA | 60.250 | 55.000 | 0.00 | 0.00 | 41.38 | 3.72 |
311 | 312 | 4.803098 | AGCTGTAACACCTTACCAGTAG | 57.197 | 45.455 | 0.00 | 0.00 | 32.52 | 2.57 |
975 | 976 | 0.701731 | TGGACCCACCCAAATCGAAT | 59.298 | 50.000 | 0.00 | 0.00 | 38.00 | 3.34 |
976 | 977 | 1.076350 | TGGACCCACCCAAATCGAATT | 59.924 | 47.619 | 0.00 | 0.00 | 38.00 | 2.17 |
981 | 982 | 2.416701 | CCCACCCAAATCGAATTTTCCG | 60.417 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
992 | 993 | 3.064207 | CGAATTTTCCGTGAGACCTTGA | 58.936 | 45.455 | 0.00 | 0.00 | 0.00 | 3.02 |
1047 | 1048 | 1.219124 | CATGGACGTGGAGGTGGAG | 59.781 | 63.158 | 0.00 | 0.00 | 0.00 | 3.86 |
1056 | 1057 | 2.674220 | GGAGGTGGAGGCCTTCCTG | 61.674 | 68.421 | 23.58 | 0.00 | 46.92 | 3.86 |
1200 | 1201 | 4.021925 | GCCGGACAGGACTGCCTT | 62.022 | 66.667 | 5.05 | 0.00 | 43.90 | 4.35 |
1242 | 1243 | 3.751246 | CCCGACGACCCGCAACTA | 61.751 | 66.667 | 0.00 | 0.00 | 0.00 | 2.24 |
1243 | 1244 | 2.505557 | CCGACGACCCGCAACTAC | 60.506 | 66.667 | 0.00 | 0.00 | 0.00 | 2.73 |
1244 | 1245 | 2.256158 | CGACGACCCGCAACTACA | 59.744 | 61.111 | 0.00 | 0.00 | 0.00 | 2.74 |
1262 | 1263 | 3.366052 | ACAACAACAACAAGGTCCTCT | 57.634 | 42.857 | 0.00 | 0.00 | 0.00 | 3.69 |
1275 | 1276 | 1.525175 | GTCCTCTCCTCTCCTCCCTA | 58.475 | 60.000 | 0.00 | 0.00 | 0.00 | 3.53 |
1276 | 1277 | 1.144298 | GTCCTCTCCTCTCCTCCCTAC | 59.856 | 61.905 | 0.00 | 0.00 | 0.00 | 3.18 |
1277 | 1278 | 0.481128 | CCTCTCCTCTCCTCCCTACC | 59.519 | 65.000 | 0.00 | 0.00 | 0.00 | 3.18 |
1278 | 1279 | 0.481128 | CTCTCCTCTCCTCCCTACCC | 59.519 | 65.000 | 0.00 | 0.00 | 0.00 | 3.69 |
1279 | 1280 | 0.048117 | TCTCCTCTCCTCCCTACCCT | 59.952 | 60.000 | 0.00 | 0.00 | 0.00 | 4.34 |
1285 | 1286 | 3.480133 | CCTCCCTACCCTTGGCCG | 61.480 | 72.222 | 0.00 | 0.00 | 0.00 | 6.13 |
1294 | 1295 | 3.423154 | CCTTGGCCGCTTGTCGAC | 61.423 | 66.667 | 9.11 | 9.11 | 41.67 | 4.20 |
1298 | 1299 | 0.036765 | TTGGCCGCTTGTCGACTTAT | 60.037 | 50.000 | 17.92 | 0.00 | 41.67 | 1.73 |
1299 | 1300 | 0.459585 | TGGCCGCTTGTCGACTTATC | 60.460 | 55.000 | 17.92 | 2.58 | 41.67 | 1.75 |
1300 | 1301 | 1.152383 | GGCCGCTTGTCGACTTATCC | 61.152 | 60.000 | 17.92 | 6.74 | 41.67 | 2.59 |
1301 | 1302 | 1.480219 | GCCGCTTGTCGACTTATCCG | 61.480 | 60.000 | 17.92 | 11.56 | 41.67 | 4.18 |
1303 | 1304 | 1.798368 | CGCTTGTCGACTTATCCGCG | 61.798 | 60.000 | 17.92 | 16.03 | 41.67 | 6.46 |
1304 | 1305 | 1.480219 | GCTTGTCGACTTATCCGCGG | 61.480 | 60.000 | 22.12 | 22.12 | 0.00 | 6.46 |
1305 | 1306 | 0.179145 | CTTGTCGACTTATCCGCGGT | 60.179 | 55.000 | 27.15 | 15.22 | 0.00 | 5.68 |
1308 | 1314 | 1.472082 | TGTCGACTTATCCGCGGTTAA | 59.528 | 47.619 | 27.15 | 25.01 | 0.00 | 2.01 |
1310 | 1316 | 3.118542 | GTCGACTTATCCGCGGTTAATT | 58.881 | 45.455 | 27.15 | 20.72 | 0.00 | 1.40 |
1317 | 1323 | 3.757745 | ATCCGCGGTTAATTTGTGAAG | 57.242 | 42.857 | 27.15 | 0.00 | 0.00 | 3.02 |
1318 | 1324 | 2.768698 | TCCGCGGTTAATTTGTGAAGA | 58.231 | 42.857 | 27.15 | 0.00 | 0.00 | 2.87 |
1322 | 1328 | 5.064198 | TCCGCGGTTAATTTGTGAAGATTAG | 59.936 | 40.000 | 27.15 | 0.00 | 0.00 | 1.73 |
1326 | 1332 | 7.180748 | GCGGTTAATTTGTGAAGATTAGAGAC | 58.819 | 38.462 | 0.00 | 0.00 | 0.00 | 3.36 |
1370 | 1376 | 2.989166 | CCATTTTTCTTTTGAGGCGAGC | 59.011 | 45.455 | 0.00 | 0.00 | 0.00 | 5.03 |
1375 | 1381 | 1.061570 | CTTTTGAGGCGAGCGATGC | 59.938 | 57.895 | 0.00 | 0.00 | 0.00 | 3.91 |
1379 | 1385 | 0.108377 | TTGAGGCGAGCGATGCTTTA | 60.108 | 50.000 | 0.00 | 0.00 | 39.88 | 1.85 |
1380 | 1386 | 0.104855 | TGAGGCGAGCGATGCTTTAT | 59.895 | 50.000 | 0.00 | 0.00 | 39.88 | 1.40 |
1381 | 1387 | 0.787183 | GAGGCGAGCGATGCTTTATC | 59.213 | 55.000 | 0.00 | 0.00 | 39.88 | 1.75 |
1382 | 1388 | 0.601311 | AGGCGAGCGATGCTTTATCC | 60.601 | 55.000 | 0.00 | 0.00 | 39.88 | 2.59 |
1383 | 1389 | 0.880278 | GGCGAGCGATGCTTTATCCA | 60.880 | 55.000 | 0.00 | 0.00 | 39.88 | 3.41 |
1384 | 1390 | 0.233332 | GCGAGCGATGCTTTATCCAC | 59.767 | 55.000 | 0.00 | 0.00 | 39.88 | 4.02 |
1385 | 1391 | 0.861837 | CGAGCGATGCTTTATCCACC | 59.138 | 55.000 | 0.00 | 0.00 | 39.88 | 4.61 |
1386 | 1392 | 1.806247 | CGAGCGATGCTTTATCCACCA | 60.806 | 52.381 | 0.00 | 0.00 | 39.88 | 4.17 |
1387 | 1393 | 1.869767 | GAGCGATGCTTTATCCACCAG | 59.130 | 52.381 | 0.00 | 0.00 | 39.88 | 4.00 |
1388 | 1394 | 1.486310 | AGCGATGCTTTATCCACCAGA | 59.514 | 47.619 | 0.00 | 0.00 | 33.89 | 3.86 |
1390 | 1396 | 2.289002 | GCGATGCTTTATCCACCAGAAG | 59.711 | 50.000 | 0.00 | 0.00 | 31.82 | 2.85 |
1392 | 1398 | 3.941483 | CGATGCTTTATCCACCAGAAGTT | 59.059 | 43.478 | 0.00 | 0.00 | 31.82 | 2.66 |
1396 | 1402 | 7.441157 | CGATGCTTTATCCACCAGAAGTTTATA | 59.559 | 37.037 | 0.00 | 0.00 | 31.82 | 0.98 |
1397 | 1403 | 7.859325 | TGCTTTATCCACCAGAAGTTTATAC | 57.141 | 36.000 | 0.00 | 0.00 | 0.00 | 1.47 |
1400 | 1406 | 9.609346 | GCTTTATCCACCAGAAGTTTATACTAA | 57.391 | 33.333 | 0.00 | 0.00 | 33.17 | 2.24 |
1405 | 1411 | 8.890410 | TCCACCAGAAGTTTATACTAAGTAGT | 57.110 | 34.615 | 0.00 | 0.00 | 40.24 | 2.73 |
1406 | 1412 | 9.979897 | TCCACCAGAAGTTTATACTAAGTAGTA | 57.020 | 33.333 | 0.80 | 0.80 | 42.43 | 1.82 |
1455 | 1461 | 7.278646 | ACTTCTTCTGATTTCTTTGTTTTTGGC | 59.721 | 33.333 | 0.00 | 0.00 | 0.00 | 4.52 |
1456 | 1462 | 6.638610 | TCTTCTGATTTCTTTGTTTTTGGCA | 58.361 | 32.000 | 0.00 | 0.00 | 0.00 | 4.92 |
1458 | 1464 | 6.219417 | TCTGATTTCTTTGTTTTTGGCAGA | 57.781 | 33.333 | 0.00 | 0.00 | 0.00 | 4.26 |
1459 | 1465 | 6.638610 | TCTGATTTCTTTGTTTTTGGCAGAA | 58.361 | 32.000 | 0.00 | 0.00 | 0.00 | 3.02 |
1460 | 1466 | 6.757947 | TCTGATTTCTTTGTTTTTGGCAGAAG | 59.242 | 34.615 | 0.00 | 0.00 | 0.00 | 2.85 |
1461 | 1467 | 5.294060 | TGATTTCTTTGTTTTTGGCAGAAGC | 59.706 | 36.000 | 0.00 | 0.00 | 41.10 | 3.86 |
1462 | 1468 | 3.883830 | TCTTTGTTTTTGGCAGAAGCA | 57.116 | 38.095 | 3.17 | 3.17 | 44.61 | 3.91 |
1485 | 1491 | 2.417719 | GCAATCCTGCCTAACCTATCG | 58.582 | 52.381 | 0.00 | 0.00 | 43.26 | 2.92 |
1496 | 1502 | 6.208644 | TGCCTAACCTATCGTCGTAATTAAC | 58.791 | 40.000 | 0.00 | 0.00 | 0.00 | 2.01 |
1497 | 1503 | 6.183360 | TGCCTAACCTATCGTCGTAATTAACA | 60.183 | 38.462 | 0.00 | 0.00 | 0.00 | 2.41 |
1499 | 1505 | 7.383300 | GCCTAACCTATCGTCGTAATTAACAAT | 59.617 | 37.037 | 0.00 | 0.00 | 0.00 | 2.71 |
1502 | 1508 | 8.882415 | AACCTATCGTCGTAATTAACAATGAT | 57.118 | 30.769 | 0.00 | 0.00 | 0.00 | 2.45 |
1503 | 1509 | 8.294341 | ACCTATCGTCGTAATTAACAATGATG | 57.706 | 34.615 | 0.00 | 0.00 | 0.00 | 3.07 |
1504 | 1510 | 8.139350 | ACCTATCGTCGTAATTAACAATGATGA | 58.861 | 33.333 | 5.79 | 5.79 | 32.66 | 2.92 |
1506 | 1512 | 9.779237 | CTATCGTCGTAATTAACAATGATGAAC | 57.221 | 33.333 | 6.96 | 0.00 | 32.06 | 3.18 |
1507 | 1513 | 7.583860 | TCGTCGTAATTAACAATGATGAACA | 57.416 | 32.000 | 0.00 | 0.00 | 0.00 | 3.18 |
1508 | 1514 | 7.671827 | TCGTCGTAATTAACAATGATGAACAG | 58.328 | 34.615 | 0.00 | 0.00 | 0.00 | 3.16 |
1509 | 1515 | 6.408039 | CGTCGTAATTAACAATGATGAACAGC | 59.592 | 38.462 | 0.00 | 0.00 | 0.00 | 4.40 |
1510 | 1516 | 6.687105 | GTCGTAATTAACAATGATGAACAGCC | 59.313 | 38.462 | 0.00 | 0.00 | 0.00 | 4.85 |
1511 | 1517 | 6.372937 | TCGTAATTAACAATGATGAACAGCCA | 59.627 | 34.615 | 0.00 | 0.00 | 0.00 | 4.75 |
1512 | 1518 | 7.066887 | TCGTAATTAACAATGATGAACAGCCAT | 59.933 | 33.333 | 0.00 | 0.00 | 0.00 | 4.40 |
1513 | 1519 | 8.341903 | CGTAATTAACAATGATGAACAGCCATA | 58.658 | 33.333 | 0.00 | 0.00 | 0.00 | 2.74 |
1514 | 1520 | 9.669353 | GTAATTAACAATGATGAACAGCCATAG | 57.331 | 33.333 | 0.00 | 0.00 | 0.00 | 2.23 |
1515 | 1521 | 8.523915 | AATTAACAATGATGAACAGCCATAGA | 57.476 | 30.769 | 0.00 | 0.00 | 0.00 | 1.98 |
1516 | 1522 | 8.701908 | ATTAACAATGATGAACAGCCATAGAT | 57.298 | 30.769 | 0.00 | 0.00 | 0.00 | 1.98 |
1517 | 1523 | 8.523915 | TTAACAATGATGAACAGCCATAGATT | 57.476 | 30.769 | 0.00 | 0.00 | 0.00 | 2.40 |
1518 | 1524 | 9.625747 | TTAACAATGATGAACAGCCATAGATTA | 57.374 | 29.630 | 0.00 | 0.00 | 0.00 | 1.75 |
1519 | 1525 | 8.523915 | AACAATGATGAACAGCCATAGATTAA | 57.476 | 30.769 | 0.00 | 0.00 | 0.00 | 1.40 |
1520 | 1526 | 8.523915 | ACAATGATGAACAGCCATAGATTAAA | 57.476 | 30.769 | 0.00 | 0.00 | 0.00 | 1.52 |
1521 | 1527 | 8.970020 | ACAATGATGAACAGCCATAGATTAAAA | 58.030 | 29.630 | 0.00 | 0.00 | 0.00 | 1.52 |
1522 | 1528 | 9.976511 | CAATGATGAACAGCCATAGATTAAAAT | 57.023 | 29.630 | 0.00 | 0.00 | 0.00 | 1.82 |
1524 | 1530 | 7.864686 | TGATGAACAGCCATAGATTAAAATCG | 58.135 | 34.615 | 0.00 | 0.00 | 40.35 | 3.34 |
1525 | 1531 | 6.060028 | TGAACAGCCATAGATTAAAATCGC | 57.940 | 37.500 | 0.00 | 0.00 | 40.35 | 4.58 |
1526 | 1532 | 4.732285 | ACAGCCATAGATTAAAATCGCG | 57.268 | 40.909 | 0.00 | 0.00 | 40.35 | 5.87 |
1527 | 1533 | 3.498397 | ACAGCCATAGATTAAAATCGCGG | 59.502 | 43.478 | 6.13 | 1.57 | 40.35 | 6.46 |
1528 | 1534 | 3.074412 | AGCCATAGATTAAAATCGCGGG | 58.926 | 45.455 | 6.13 | 0.00 | 40.35 | 6.13 |
1529 | 1535 | 3.071479 | GCCATAGATTAAAATCGCGGGA | 58.929 | 45.455 | 6.13 | 4.03 | 40.35 | 5.14 |
1530 | 1536 | 3.125316 | GCCATAGATTAAAATCGCGGGAG | 59.875 | 47.826 | 6.13 | 0.00 | 40.35 | 4.30 |
1531 | 1537 | 4.566004 | CCATAGATTAAAATCGCGGGAGA | 58.434 | 43.478 | 6.13 | 0.00 | 40.35 | 3.71 |
1532 | 1538 | 4.994852 | CCATAGATTAAAATCGCGGGAGAA | 59.005 | 41.667 | 6.13 | 0.05 | 40.35 | 2.87 |
1533 | 1539 | 5.468746 | CCATAGATTAAAATCGCGGGAGAAA | 59.531 | 40.000 | 6.13 | 0.00 | 40.35 | 2.52 |
1534 | 1540 | 4.877323 | AGATTAAAATCGCGGGAGAAAC | 57.123 | 40.909 | 6.13 | 0.00 | 40.35 | 2.78 |
1535 | 1541 | 4.258543 | AGATTAAAATCGCGGGAGAAACA | 58.741 | 39.130 | 6.13 | 0.00 | 40.35 | 2.83 |
1536 | 1542 | 4.698304 | AGATTAAAATCGCGGGAGAAACAA | 59.302 | 37.500 | 6.13 | 0.00 | 40.35 | 2.83 |
1537 | 1543 | 5.357032 | AGATTAAAATCGCGGGAGAAACAAT | 59.643 | 36.000 | 6.13 | 3.86 | 40.35 | 2.71 |
1538 | 1544 | 3.934457 | AAAATCGCGGGAGAAACAATT | 57.066 | 38.095 | 6.13 | 0.00 | 0.00 | 2.32 |
1539 | 1545 | 3.934457 | AAATCGCGGGAGAAACAATTT | 57.066 | 38.095 | 6.13 | 0.00 | 0.00 | 1.82 |
1540 | 1546 | 3.487563 | AATCGCGGGAGAAACAATTTC | 57.512 | 42.857 | 6.13 | 0.00 | 39.96 | 2.17 |
1541 | 1547 | 1.885560 | TCGCGGGAGAAACAATTTCA | 58.114 | 45.000 | 6.13 | 0.00 | 42.10 | 2.69 |
1542 | 1548 | 1.533731 | TCGCGGGAGAAACAATTTCAC | 59.466 | 47.619 | 6.13 | 0.00 | 42.10 | 3.18 |
1543 | 1549 | 1.724654 | CGCGGGAGAAACAATTTCACG | 60.725 | 52.381 | 0.00 | 6.44 | 42.10 | 4.35 |
1544 | 1550 | 1.401018 | GCGGGAGAAACAATTTCACGG | 60.401 | 52.381 | 1.29 | 2.79 | 42.10 | 4.94 |
1545 | 1551 | 1.401018 | CGGGAGAAACAATTTCACGGC | 60.401 | 52.381 | 4.25 | 0.00 | 42.10 | 5.68 |
1546 | 1552 | 1.401018 | GGGAGAAACAATTTCACGGCG | 60.401 | 52.381 | 4.80 | 4.80 | 42.10 | 6.46 |
1547 | 1553 | 1.401018 | GGAGAAACAATTTCACGGCGG | 60.401 | 52.381 | 13.24 | 0.00 | 42.10 | 6.13 |
1548 | 1554 | 0.039527 | AGAAACAATTTCACGGCGGC | 60.040 | 50.000 | 13.24 | 0.00 | 42.10 | 6.53 |
1549 | 1555 | 1.006688 | AAACAATTTCACGGCGGCC | 60.007 | 52.632 | 13.24 | 9.54 | 0.00 | 6.13 |
1550 | 1556 | 1.460273 | AAACAATTTCACGGCGGCCT | 61.460 | 50.000 | 18.34 | 0.89 | 0.00 | 5.19 |
1551 | 1557 | 1.862602 | AACAATTTCACGGCGGCCTC | 61.863 | 55.000 | 18.34 | 0.00 | 0.00 | 4.70 |
1552 | 1558 | 2.040544 | CAATTTCACGGCGGCCTCT | 61.041 | 57.895 | 18.34 | 0.00 | 0.00 | 3.69 |
1553 | 1559 | 1.745489 | AATTTCACGGCGGCCTCTC | 60.745 | 57.895 | 18.34 | 0.00 | 0.00 | 3.20 |
1554 | 1560 | 3.682292 | ATTTCACGGCGGCCTCTCC | 62.682 | 63.158 | 18.34 | 0.00 | 0.00 | 3.71 |
1560 | 1566 | 4.785453 | GGCGGCCTCTCCCAACAG | 62.785 | 72.222 | 12.87 | 0.00 | 0.00 | 3.16 |
1562 | 1568 | 3.710722 | CGGCCTCTCCCAACAGCT | 61.711 | 66.667 | 0.00 | 0.00 | 0.00 | 4.24 |
1563 | 1569 | 2.359169 | CGGCCTCTCCCAACAGCTA | 61.359 | 63.158 | 0.00 | 0.00 | 0.00 | 3.32 |
1564 | 1570 | 1.690219 | CGGCCTCTCCCAACAGCTAT | 61.690 | 60.000 | 0.00 | 0.00 | 0.00 | 2.97 |
1565 | 1571 | 1.424638 | GGCCTCTCCCAACAGCTATA | 58.575 | 55.000 | 0.00 | 0.00 | 0.00 | 1.31 |
1566 | 1572 | 1.346068 | GGCCTCTCCCAACAGCTATAG | 59.654 | 57.143 | 0.00 | 0.00 | 0.00 | 1.31 |
1567 | 1573 | 1.270571 | GCCTCTCCCAACAGCTATAGC | 60.271 | 57.143 | 17.33 | 17.33 | 42.49 | 2.97 |
1577 | 1583 | 2.577059 | GCTATAGCGGCCGCCATA | 59.423 | 61.111 | 44.47 | 37.39 | 43.17 | 2.74 |
1578 | 1584 | 1.519455 | GCTATAGCGGCCGCCATAG | 60.519 | 63.158 | 42.63 | 42.63 | 42.74 | 2.23 |
1579 | 1585 | 1.519455 | CTATAGCGGCCGCCATAGC | 60.519 | 63.158 | 39.53 | 19.64 | 43.17 | 2.97 |
1590 | 1596 | 2.332514 | CCATAGCGGGCAATTGCG | 59.667 | 61.111 | 23.48 | 12.29 | 43.26 | 4.85 |
1591 | 1597 | 2.332514 | CATAGCGGGCAATTGCGG | 59.667 | 61.111 | 23.48 | 18.28 | 43.26 | 5.69 |
1592 | 1598 | 3.595758 | ATAGCGGGCAATTGCGGC | 61.596 | 61.111 | 27.85 | 27.85 | 43.26 | 6.53 |
1596 | 1602 | 2.125592 | CGGGCAATTGCGGCAAAT | 60.126 | 55.556 | 23.48 | 8.73 | 43.26 | 2.32 |
1597 | 1603 | 1.140589 | CGGGCAATTGCGGCAAATA | 59.859 | 52.632 | 23.48 | 0.00 | 43.26 | 1.40 |
1598 | 1604 | 0.871163 | CGGGCAATTGCGGCAAATAG | 60.871 | 55.000 | 23.48 | 13.00 | 43.26 | 1.73 |
1599 | 1605 | 1.153597 | GGGCAATTGCGGCAAATAGC | 61.154 | 55.000 | 23.48 | 21.08 | 43.26 | 2.97 |
1600 | 1606 | 1.481819 | GGCAATTGCGGCAAATAGCG | 61.482 | 55.000 | 23.48 | 7.56 | 43.26 | 4.26 |
1604 | 1610 | 0.814457 | ATTGCGGCAAATAGCGGAAA | 59.186 | 45.000 | 20.48 | 0.00 | 44.24 | 3.13 |
1605 | 1611 | 1.408702 | ATTGCGGCAAATAGCGGAAAT | 59.591 | 42.857 | 20.48 | 0.00 | 44.08 | 2.17 |
1606 | 1612 | 2.159114 | ATTGCGGCAAATAGCGGAAATT | 60.159 | 40.909 | 20.48 | 0.00 | 46.43 | 1.82 |
1607 | 1613 | 3.678529 | ATTGCGGCAAATAGCGGAAATTT | 60.679 | 39.130 | 20.48 | 0.00 | 46.43 | 1.82 |
1608 | 1614 | 5.155479 | ATTGCGGCAAATAGCGGAAATTTT | 61.155 | 37.500 | 20.48 | 0.00 | 46.43 | 1.82 |
1609 | 1615 | 6.594968 | ATTGCGGCAAATAGCGGAAATTTTT | 61.595 | 36.000 | 20.48 | 0.00 | 46.43 | 1.94 |
1610 | 1616 | 8.307543 | ATTGCGGCAAATAGCGGAAATTTTTC | 62.308 | 38.462 | 20.48 | 0.00 | 46.43 | 2.29 |
1613 | 1619 | 5.454736 | GCAAATAGCGGAAATTTTTCTGG | 57.545 | 39.130 | 12.51 | 3.14 | 42.46 | 3.86 |
1618 | 1624 | 3.378911 | GCGGAAATTTTTCTGGTGGAA | 57.621 | 42.857 | 12.51 | 0.00 | 42.46 | 3.53 |
1619 | 1625 | 3.317150 | GCGGAAATTTTTCTGGTGGAAG | 58.683 | 45.455 | 12.51 | 0.00 | 42.46 | 3.46 |
1620 | 1626 | 3.005367 | GCGGAAATTTTTCTGGTGGAAGA | 59.995 | 43.478 | 12.51 | 0.00 | 42.46 | 2.87 |
1621 | 1627 | 4.798574 | CGGAAATTTTTCTGGTGGAAGAG | 58.201 | 43.478 | 4.28 | 0.00 | 39.36 | 2.85 |
1622 | 1628 | 4.518970 | CGGAAATTTTTCTGGTGGAAGAGA | 59.481 | 41.667 | 4.28 | 0.00 | 39.36 | 3.10 |
1623 | 1629 | 5.183904 | CGGAAATTTTTCTGGTGGAAGAGAT | 59.816 | 40.000 | 4.28 | 0.00 | 39.36 | 2.75 |
1624 | 1630 | 6.393171 | GGAAATTTTTCTGGTGGAAGAGATG | 58.607 | 40.000 | 3.28 | 0.00 | 37.35 | 2.90 |
1625 | 1631 | 6.209391 | GGAAATTTTTCTGGTGGAAGAGATGA | 59.791 | 38.462 | 3.28 | 0.00 | 37.35 | 2.92 |
1626 | 1632 | 7.093596 | GGAAATTTTTCTGGTGGAAGAGATGAT | 60.094 | 37.037 | 3.28 | 0.00 | 37.35 | 2.45 |
1627 | 1633 | 7.787623 | AATTTTTCTGGTGGAAGAGATGATT | 57.212 | 32.000 | 0.00 | 0.00 | 35.16 | 2.57 |
1628 | 1634 | 6.824305 | TTTTTCTGGTGGAAGAGATGATTC | 57.176 | 37.500 | 0.00 | 0.00 | 35.16 | 2.52 |
1629 | 1635 | 4.494091 | TTCTGGTGGAAGAGATGATTCC | 57.506 | 45.455 | 0.00 | 0.00 | 45.45 | 3.01 |
1630 | 1636 | 3.729108 | TCTGGTGGAAGAGATGATTCCT | 58.271 | 45.455 | 6.31 | 0.00 | 45.45 | 3.36 |
1631 | 1637 | 4.883759 | TCTGGTGGAAGAGATGATTCCTA | 58.116 | 43.478 | 6.31 | 0.00 | 45.45 | 2.94 |
1632 | 1638 | 4.898265 | TCTGGTGGAAGAGATGATTCCTAG | 59.102 | 45.833 | 6.31 | 3.13 | 45.45 | 3.02 |
1633 | 1639 | 4.883759 | TGGTGGAAGAGATGATTCCTAGA | 58.116 | 43.478 | 6.31 | 0.00 | 45.45 | 2.43 |
1634 | 1640 | 4.898265 | TGGTGGAAGAGATGATTCCTAGAG | 59.102 | 45.833 | 6.31 | 0.00 | 45.45 | 2.43 |
1635 | 1641 | 4.283212 | GGTGGAAGAGATGATTCCTAGAGG | 59.717 | 50.000 | 6.31 | 0.00 | 45.45 | 3.69 |
1636 | 1642 | 4.283212 | GTGGAAGAGATGATTCCTAGAGGG | 59.717 | 50.000 | 6.31 | 0.00 | 45.45 | 4.30 |
1637 | 1643 | 4.078336 | TGGAAGAGATGATTCCTAGAGGGT | 60.078 | 45.833 | 6.31 | 0.00 | 45.45 | 4.34 |
1638 | 1644 | 4.904853 | GGAAGAGATGATTCCTAGAGGGTT | 59.095 | 45.833 | 0.00 | 0.00 | 42.52 | 4.11 |
1639 | 1645 | 5.368230 | GGAAGAGATGATTCCTAGAGGGTTT | 59.632 | 44.000 | 0.00 | 0.00 | 42.52 | 3.27 |
1640 | 1646 | 6.126623 | GGAAGAGATGATTCCTAGAGGGTTTT | 60.127 | 42.308 | 0.00 | 0.00 | 42.52 | 2.43 |
1641 | 1647 | 6.245890 | AGAGATGATTCCTAGAGGGTTTTG | 57.754 | 41.667 | 0.00 | 0.00 | 36.25 | 2.44 |
1642 | 1648 | 4.786425 | AGATGATTCCTAGAGGGTTTTGC | 58.214 | 43.478 | 0.00 | 0.00 | 36.25 | 3.68 |
1643 | 1649 | 4.476479 | AGATGATTCCTAGAGGGTTTTGCT | 59.524 | 41.667 | 0.00 | 0.00 | 36.25 | 3.91 |
1644 | 1650 | 5.667626 | AGATGATTCCTAGAGGGTTTTGCTA | 59.332 | 40.000 | 0.00 | 0.00 | 36.25 | 3.49 |
1645 | 1651 | 5.975988 | TGATTCCTAGAGGGTTTTGCTAT | 57.024 | 39.130 | 0.00 | 0.00 | 36.25 | 2.97 |
1646 | 1652 | 6.327386 | TGATTCCTAGAGGGTTTTGCTATT | 57.673 | 37.500 | 0.00 | 0.00 | 36.25 | 1.73 |
1647 | 1653 | 6.122277 | TGATTCCTAGAGGGTTTTGCTATTG | 58.878 | 40.000 | 0.00 | 0.00 | 36.25 | 1.90 |
1648 | 1654 | 4.503714 | TCCTAGAGGGTTTTGCTATTGG | 57.496 | 45.455 | 0.00 | 0.00 | 36.25 | 3.16 |
1649 | 1655 | 3.850173 | TCCTAGAGGGTTTTGCTATTGGT | 59.150 | 43.478 | 0.00 | 0.00 | 36.25 | 3.67 |
1650 | 1656 | 4.291249 | TCCTAGAGGGTTTTGCTATTGGTT | 59.709 | 41.667 | 0.00 | 0.00 | 36.25 | 3.67 |
1651 | 1657 | 4.399303 | CCTAGAGGGTTTTGCTATTGGTTG | 59.601 | 45.833 | 0.00 | 0.00 | 0.00 | 3.77 |
1652 | 1658 | 4.112634 | AGAGGGTTTTGCTATTGGTTGA | 57.887 | 40.909 | 0.00 | 0.00 | 0.00 | 3.18 |
1653 | 1659 | 4.082125 | AGAGGGTTTTGCTATTGGTTGAG | 58.918 | 43.478 | 0.00 | 0.00 | 0.00 | 3.02 |
1654 | 1660 | 2.562738 | AGGGTTTTGCTATTGGTTGAGC | 59.437 | 45.455 | 0.00 | 0.00 | 39.25 | 4.26 |
1655 | 1661 | 2.353704 | GGGTTTTGCTATTGGTTGAGCC | 60.354 | 50.000 | 0.00 | 0.00 | 37.94 | 4.70 |
1668 | 1674 | 5.402054 | TGGTTGAGCCATTTATAGGGATT | 57.598 | 39.130 | 0.00 | 0.00 | 43.61 | 3.01 |
1669 | 1675 | 5.776358 | TGGTTGAGCCATTTATAGGGATTT | 58.224 | 37.500 | 0.00 | 0.00 | 43.61 | 2.17 |
1670 | 1676 | 5.598005 | TGGTTGAGCCATTTATAGGGATTTG | 59.402 | 40.000 | 0.00 | 0.00 | 43.61 | 2.32 |
1671 | 1677 | 5.598417 | GGTTGAGCCATTTATAGGGATTTGT | 59.402 | 40.000 | 0.00 | 0.00 | 37.17 | 2.83 |
1672 | 1678 | 6.461509 | GGTTGAGCCATTTATAGGGATTTGTG | 60.462 | 42.308 | 0.00 | 0.00 | 37.17 | 3.33 |
1673 | 1679 | 5.139727 | TGAGCCATTTATAGGGATTTGTGG | 58.860 | 41.667 | 0.00 | 0.00 | 0.00 | 4.17 |
1674 | 1680 | 5.103728 | TGAGCCATTTATAGGGATTTGTGGA | 60.104 | 40.000 | 0.00 | 0.00 | 0.00 | 4.02 |
1675 | 1681 | 5.388654 | AGCCATTTATAGGGATTTGTGGAG | 58.611 | 41.667 | 0.00 | 0.00 | 0.00 | 3.86 |
1676 | 1682 | 4.524328 | GCCATTTATAGGGATTTGTGGAGG | 59.476 | 45.833 | 0.00 | 0.00 | 0.00 | 4.30 |
1677 | 1683 | 5.692781 | GCCATTTATAGGGATTTGTGGAGGA | 60.693 | 44.000 | 0.00 | 0.00 | 0.00 | 3.71 |
1678 | 1684 | 6.555711 | CCATTTATAGGGATTTGTGGAGGAT | 58.444 | 40.000 | 0.00 | 0.00 | 0.00 | 3.24 |
1679 | 1685 | 7.012607 | CCATTTATAGGGATTTGTGGAGGATT | 58.987 | 38.462 | 0.00 | 0.00 | 0.00 | 3.01 |
1680 | 1686 | 7.510343 | CCATTTATAGGGATTTGTGGAGGATTT | 59.490 | 37.037 | 0.00 | 0.00 | 0.00 | 2.17 |
1681 | 1687 | 8.579863 | CATTTATAGGGATTTGTGGAGGATTTC | 58.420 | 37.037 | 0.00 | 0.00 | 0.00 | 2.17 |
1682 | 1688 | 3.004752 | AGGGATTTGTGGAGGATTTCG | 57.995 | 47.619 | 0.00 | 0.00 | 0.00 | 3.46 |
1683 | 1689 | 2.308866 | AGGGATTTGTGGAGGATTTCGT | 59.691 | 45.455 | 0.00 | 0.00 | 0.00 | 3.85 |
1684 | 1690 | 2.423538 | GGGATTTGTGGAGGATTTCGTG | 59.576 | 50.000 | 0.00 | 0.00 | 0.00 | 4.35 |
1685 | 1691 | 3.343617 | GGATTTGTGGAGGATTTCGTGA | 58.656 | 45.455 | 0.00 | 0.00 | 0.00 | 4.35 |
1686 | 1692 | 3.127030 | GGATTTGTGGAGGATTTCGTGAC | 59.873 | 47.826 | 0.00 | 0.00 | 0.00 | 3.67 |
1687 | 1693 | 2.920724 | TTGTGGAGGATTTCGTGACA | 57.079 | 45.000 | 0.00 | 0.00 | 0.00 | 3.58 |
1688 | 1694 | 2.455674 | TGTGGAGGATTTCGTGACAG | 57.544 | 50.000 | 0.00 | 0.00 | 0.00 | 3.51 |
1689 | 1695 | 1.079503 | GTGGAGGATTTCGTGACAGC | 58.920 | 55.000 | 0.00 | 0.00 | 0.00 | 4.40 |
1690 | 1696 | 0.684535 | TGGAGGATTTCGTGACAGCA | 59.315 | 50.000 | 0.00 | 0.00 | 0.00 | 4.41 |
1691 | 1697 | 1.071542 | TGGAGGATTTCGTGACAGCAA | 59.928 | 47.619 | 0.00 | 0.00 | 0.00 | 3.91 |
1692 | 1698 | 1.464997 | GGAGGATTTCGTGACAGCAAC | 59.535 | 52.381 | 0.00 | 0.00 | 0.00 | 4.17 |
1693 | 1699 | 1.464997 | GAGGATTTCGTGACAGCAACC | 59.535 | 52.381 | 0.00 | 0.00 | 0.00 | 3.77 |
1694 | 1700 | 1.202758 | AGGATTTCGTGACAGCAACCA | 60.203 | 47.619 | 0.00 | 0.00 | 0.00 | 3.67 |
1695 | 1701 | 1.812571 | GGATTTCGTGACAGCAACCAT | 59.187 | 47.619 | 0.00 | 0.00 | 0.00 | 3.55 |
1696 | 1702 | 3.006940 | GGATTTCGTGACAGCAACCATA | 58.993 | 45.455 | 0.00 | 0.00 | 0.00 | 2.74 |
1697 | 1703 | 3.063997 | GGATTTCGTGACAGCAACCATAG | 59.936 | 47.826 | 0.00 | 0.00 | 0.00 | 2.23 |
1698 | 1704 | 1.438651 | TTCGTGACAGCAACCATAGC | 58.561 | 50.000 | 0.00 | 0.00 | 0.00 | 2.97 |
1699 | 1705 | 0.735978 | TCGTGACAGCAACCATAGCG | 60.736 | 55.000 | 0.00 | 0.00 | 37.01 | 4.26 |
1700 | 1706 | 1.014044 | CGTGACAGCAACCATAGCGT | 61.014 | 55.000 | 0.00 | 0.00 | 37.01 | 5.07 |
1701 | 1707 | 1.734377 | CGTGACAGCAACCATAGCGTA | 60.734 | 52.381 | 0.00 | 0.00 | 37.01 | 4.42 |
1702 | 1708 | 1.927174 | GTGACAGCAACCATAGCGTAG | 59.073 | 52.381 | 0.00 | 0.00 | 37.01 | 3.51 |
1715 | 1721 | 4.615834 | CGTAGCGGCGAGGCTCTC | 62.616 | 72.222 | 12.98 | 4.08 | 43.54 | 3.20 |
1724 | 1730 | 2.835431 | GAGGCTCTCGGGCAGCTA | 60.835 | 66.667 | 7.40 | 0.00 | 43.56 | 3.32 |
1725 | 1731 | 2.123077 | AGGCTCTCGGGCAGCTAT | 60.123 | 61.111 | 6.68 | 0.00 | 43.56 | 2.97 |
1726 | 1732 | 0.896019 | GAGGCTCTCGGGCAGCTATA | 60.896 | 60.000 | 7.40 | 0.00 | 43.56 | 1.31 |
1727 | 1733 | 0.897863 | AGGCTCTCGGGCAGCTATAG | 60.898 | 60.000 | 6.68 | 0.00 | 43.56 | 1.31 |
1728 | 1734 | 1.080161 | GCTCTCGGGCAGCTATAGC | 60.080 | 63.158 | 17.33 | 17.33 | 42.49 | 2.97 |
1742 | 1748 | 2.415843 | TAGCGCAGGTATCACGGC | 59.584 | 61.111 | 11.47 | 0.00 | 40.68 | 5.68 |
1743 | 1749 | 2.125326 | TAGCGCAGGTATCACGGCT | 61.125 | 57.895 | 11.47 | 0.00 | 40.68 | 5.52 |
1744 | 1750 | 0.820482 | TAGCGCAGGTATCACGGCTA | 60.820 | 55.000 | 11.47 | 0.00 | 40.68 | 3.93 |
1745 | 1751 | 1.006102 | GCGCAGGTATCACGGCTAT | 60.006 | 57.895 | 0.30 | 0.00 | 0.00 | 2.97 |
1746 | 1752 | 0.600255 | GCGCAGGTATCACGGCTATT | 60.600 | 55.000 | 0.30 | 0.00 | 0.00 | 1.73 |
1747 | 1753 | 1.865865 | CGCAGGTATCACGGCTATTT | 58.134 | 50.000 | 0.00 | 0.00 | 0.00 | 1.40 |
1748 | 1754 | 2.210116 | CGCAGGTATCACGGCTATTTT | 58.790 | 47.619 | 0.00 | 0.00 | 0.00 | 1.82 |
1749 | 1755 | 2.032894 | CGCAGGTATCACGGCTATTTTG | 60.033 | 50.000 | 0.00 | 0.00 | 0.00 | 2.44 |
1750 | 1756 | 2.287009 | GCAGGTATCACGGCTATTTTGC | 60.287 | 50.000 | 0.00 | 0.00 | 0.00 | 3.68 |
1751 | 1757 | 2.032894 | CAGGTATCACGGCTATTTTGCG | 60.033 | 50.000 | 0.00 | 0.00 | 0.00 | 4.85 |
1752 | 1758 | 1.263217 | GGTATCACGGCTATTTTGCGG | 59.737 | 52.381 | 0.00 | 0.00 | 38.88 | 5.69 |
1753 | 1759 | 1.263217 | GTATCACGGCTATTTTGCGGG | 59.737 | 52.381 | 0.00 | 0.00 | 37.55 | 6.13 |
1754 | 1760 | 1.724582 | ATCACGGCTATTTTGCGGGC | 61.725 | 55.000 | 0.00 | 0.00 | 37.55 | 6.13 |
1755 | 1761 | 2.045340 | ACGGCTATTTTGCGGGCT | 60.045 | 55.556 | 0.00 | 0.00 | 37.55 | 5.19 |
1756 | 1762 | 1.092921 | CACGGCTATTTTGCGGGCTA | 61.093 | 55.000 | 0.00 | 0.00 | 37.55 | 3.93 |
1757 | 1763 | 0.179029 | ACGGCTATTTTGCGGGCTAT | 60.179 | 50.000 | 0.00 | 0.00 | 37.55 | 2.97 |
1758 | 1764 | 0.951558 | CGGCTATTTTGCGGGCTATT | 59.048 | 50.000 | 0.00 | 0.00 | 0.00 | 1.73 |
1759 | 1765 | 1.336755 | CGGCTATTTTGCGGGCTATTT | 59.663 | 47.619 | 0.00 | 0.00 | 0.00 | 1.40 |
1760 | 1766 | 2.223711 | CGGCTATTTTGCGGGCTATTTT | 60.224 | 45.455 | 0.00 | 0.00 | 0.00 | 1.82 |
1761 | 1767 | 3.003897 | CGGCTATTTTGCGGGCTATTTTA | 59.996 | 43.478 | 0.00 | 0.00 | 0.00 | 1.52 |
1762 | 1768 | 4.498345 | CGGCTATTTTGCGGGCTATTTTAA | 60.498 | 41.667 | 0.00 | 0.00 | 0.00 | 1.52 |
1763 | 1769 | 5.538118 | GGCTATTTTGCGGGCTATTTTAAT | 58.462 | 37.500 | 0.00 | 0.00 | 0.00 | 1.40 |
1764 | 1770 | 5.633601 | GGCTATTTTGCGGGCTATTTTAATC | 59.366 | 40.000 | 0.00 | 0.00 | 0.00 | 1.75 |
1765 | 1771 | 6.447162 | GCTATTTTGCGGGCTATTTTAATCT | 58.553 | 36.000 | 0.00 | 0.00 | 0.00 | 2.40 |
1766 | 1772 | 7.308951 | GGCTATTTTGCGGGCTATTTTAATCTA | 60.309 | 37.037 | 0.00 | 0.00 | 0.00 | 1.98 |
1767 | 1773 | 8.244113 | GCTATTTTGCGGGCTATTTTAATCTAT | 58.756 | 33.333 | 0.00 | 0.00 | 0.00 | 1.98 |
1768 | 1774 | 9.559958 | CTATTTTGCGGGCTATTTTAATCTATG | 57.440 | 33.333 | 0.00 | 0.00 | 0.00 | 2.23 |
1800 | 1806 | 9.410556 | AGCATTAAAATGTTGTATCTTTGTGTC | 57.589 | 29.630 | 4.71 | 0.00 | 38.65 | 3.67 |
1807 | 1813 | 4.684242 | TGTTGTATCTTTGTGTCTACTGCG | 59.316 | 41.667 | 0.00 | 0.00 | 0.00 | 5.18 |
1810 | 1816 | 3.660501 | ATCTTTGTGTCTACTGCGACA | 57.339 | 42.857 | 0.00 | 0.00 | 41.33 | 4.35 |
1811 | 1817 | 3.446310 | TCTTTGTGTCTACTGCGACAA | 57.554 | 42.857 | 2.50 | 0.00 | 44.73 | 3.18 |
1812 | 1818 | 3.381045 | TCTTTGTGTCTACTGCGACAAG | 58.619 | 45.455 | 2.50 | 0.00 | 44.73 | 3.16 |
1813 | 1819 | 1.497991 | TTGTGTCTACTGCGACAAGC | 58.502 | 50.000 | 2.50 | 0.00 | 44.73 | 4.01 |
1814 | 1820 | 0.319555 | TGTGTCTACTGCGACAAGCC | 60.320 | 55.000 | 2.50 | 0.00 | 44.73 | 4.35 |
1815 | 1821 | 1.344942 | GTGTCTACTGCGACAAGCCG | 61.345 | 60.000 | 2.50 | 0.00 | 44.73 | 5.52 |
1822 | 1828 | 2.551270 | GCGACAAGCCGACAAGTG | 59.449 | 61.111 | 0.00 | 0.00 | 40.81 | 3.16 |
1829 | 1835 | 1.788308 | CAAGCCGACAAGTGCAATTTG | 59.212 | 47.619 | 0.00 | 3.51 | 39.72 | 2.32 |
1858 | 1869 | 9.041354 | AGACTCTTACTTACATTTTCTCCTGAT | 57.959 | 33.333 | 0.00 | 0.00 | 0.00 | 2.90 |
1878 | 1889 | 7.611467 | TCCTGATTGAGTTTGCTATGTGTATTT | 59.389 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
1879 | 1890 | 8.892723 | CCTGATTGAGTTTGCTATGTGTATTTA | 58.107 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
1931 | 1942 | 9.241919 | TCATGTATTATCTTTGGTTGACACAAT | 57.758 | 29.630 | 0.00 | 0.00 | 0.00 | 2.71 |
1932 | 1943 | 9.292846 | CATGTATTATCTTTGGTTGACACAATG | 57.707 | 33.333 | 0.00 | 0.00 | 0.00 | 2.82 |
1933 | 1944 | 8.402798 | TGTATTATCTTTGGTTGACACAATGT | 57.597 | 30.769 | 0.00 | 0.00 | 0.00 | 2.71 |
1934 | 1945 | 9.508642 | TGTATTATCTTTGGTTGACACAATGTA | 57.491 | 29.630 | 0.00 | 0.00 | 0.00 | 2.29 |
1980 | 1991 | 6.586344 | TGTTTGATAACAAATTTGCTTCCCA | 58.414 | 32.000 | 18.12 | 7.32 | 45.71 | 4.37 |
1982 | 1993 | 8.370940 | TGTTTGATAACAAATTTGCTTCCCATA | 58.629 | 29.630 | 18.12 | 3.35 | 45.71 | 2.74 |
1983 | 1994 | 9.213799 | GTTTGATAACAAATTTGCTTCCCATAA | 57.786 | 29.630 | 18.12 | 1.36 | 45.71 | 1.90 |
2017 | 2038 | 7.539712 | TTAATCAACTGCTTCTAGGATTTCG | 57.460 | 36.000 | 0.00 | 0.00 | 0.00 | 3.46 |
2063 | 2084 | 2.224257 | TGGCATTTTTGTTCCTTGCTCC | 60.224 | 45.455 | 0.00 | 0.00 | 33.86 | 4.70 |
2111 | 2132 | 2.417243 | GCAACCGGATTCCATTTTCAGG | 60.417 | 50.000 | 9.46 | 0.00 | 33.93 | 3.86 |
2194 | 2215 | 2.230660 | GTGGTCTCCTTTCAAGGTTGG | 58.769 | 52.381 | 5.48 | 0.00 | 46.54 | 3.77 |
2233 | 2259 | 4.621991 | GCTCGATACTTTATCTTGCTCCA | 58.378 | 43.478 | 0.00 | 0.00 | 33.01 | 3.86 |
2236 | 2262 | 5.050490 | TCGATACTTTATCTTGCTCCAAGC | 58.950 | 41.667 | 0.22 | 0.00 | 40.84 | 4.01 |
2661 | 4025 | 4.836125 | TGCAGACCAGATTTGAAGAAAC | 57.164 | 40.909 | 0.00 | 0.00 | 0.00 | 2.78 |
2787 | 4160 | 4.199310 | CTGTTCCTTTCAGGTCAGTTGAA | 58.801 | 43.478 | 8.52 | 0.00 | 36.53 | 2.69 |
2815 | 4375 | 9.593134 | GACATCTTCTATGTGTCTAGAAAATGT | 57.407 | 33.333 | 10.87 | 10.87 | 45.45 | 2.71 |
2839 | 4399 | 5.359292 | TGTTGACATGTGATTTGTTCTCCAA | 59.641 | 36.000 | 1.15 | 0.00 | 0.00 | 3.53 |
2840 | 4400 | 5.694231 | TGACATGTGATTTGTTCTCCAAG | 57.306 | 39.130 | 1.15 | 0.00 | 33.75 | 3.61 |
2842 | 4402 | 4.147321 | ACATGTGATTTGTTCTCCAAGCT | 58.853 | 39.130 | 0.00 | 0.00 | 33.75 | 3.74 |
2843 | 4403 | 4.217118 | ACATGTGATTTGTTCTCCAAGCTC | 59.783 | 41.667 | 0.00 | 0.00 | 33.75 | 4.09 |
2844 | 4404 | 2.807967 | TGTGATTTGTTCTCCAAGCTCG | 59.192 | 45.455 | 0.00 | 0.00 | 33.75 | 5.03 |
2845 | 4405 | 2.808543 | GTGATTTGTTCTCCAAGCTCGT | 59.191 | 45.455 | 0.00 | 0.00 | 33.75 | 4.18 |
2847 | 4407 | 2.910688 | TTTGTTCTCCAAGCTCGTCT | 57.089 | 45.000 | 0.00 | 0.00 | 33.75 | 4.18 |
2848 | 4408 | 4.021456 | TGATTTGTTCTCCAAGCTCGTCTA | 60.021 | 41.667 | 0.00 | 0.00 | 33.75 | 2.59 |
2851 | 4720 | 3.650139 | TGTTCTCCAAGCTCGTCTAAAC | 58.350 | 45.455 | 0.00 | 0.00 | 0.00 | 2.01 |
3509 | 5548 | 2.061848 | TCTTTGTGGATCTTGGTGGGA | 58.938 | 47.619 | 0.00 | 0.00 | 0.00 | 4.37 |
3626 | 5665 | 0.655733 | CGACCAGGTTTGTGTGTGTC | 59.344 | 55.000 | 0.00 | 0.00 | 0.00 | 3.67 |
3679 | 5803 | 4.909284 | AGGGAGGGGAGACTATTAATGTT | 58.091 | 43.478 | 0.00 | 0.00 | 0.00 | 2.71 |
3683 | 5807 | 5.367060 | GGAGGGGAGACTATTAATGTTGAGT | 59.633 | 44.000 | 0.00 | 0.00 | 0.00 | 3.41 |
3945 | 6077 | 6.213600 | ACTCCTGATGTAATACTTGGTGTCTT | 59.786 | 38.462 | 0.00 | 0.00 | 0.00 | 3.01 |
4118 | 6256 | 1.433534 | CTCTTCAGTTGTTCTCGCCC | 58.566 | 55.000 | 0.00 | 0.00 | 0.00 | 6.13 |
4291 | 7875 | 2.507484 | TGGTGACAAGAATGCTGAAGG | 58.493 | 47.619 | 0.00 | 0.00 | 37.44 | 3.46 |
4302 | 7886 | 2.638480 | TGCTGAAGGTACTGCTTTGT | 57.362 | 45.000 | 0.00 | 0.00 | 40.86 | 2.83 |
4303 | 7887 | 2.930950 | TGCTGAAGGTACTGCTTTGTT | 58.069 | 42.857 | 0.00 | 0.00 | 40.86 | 2.83 |
4304 | 7888 | 3.287222 | TGCTGAAGGTACTGCTTTGTTT | 58.713 | 40.909 | 0.00 | 0.00 | 40.86 | 2.83 |
4352 | 7938 | 4.688879 | TGTACCGAAGCTGAAAACATAGTG | 59.311 | 41.667 | 0.00 | 0.00 | 0.00 | 2.74 |
4373 | 7959 | 4.451096 | GTGACTGTAATTGAATCACCACGT | 59.549 | 41.667 | 0.00 | 0.00 | 34.83 | 4.49 |
4379 | 7965 | 7.174253 | ACTGTAATTGAATCACCACGTAAATGT | 59.826 | 33.333 | 0.00 | 0.00 | 0.00 | 2.71 |
4449 | 8035 | 1.375908 | GGCATGGCTCAGTTCGACA | 60.376 | 57.895 | 12.86 | 0.00 | 0.00 | 4.35 |
4608 | 8200 | 0.676466 | CACCCTACCTTCGCATGCAA | 60.676 | 55.000 | 19.57 | 10.18 | 0.00 | 4.08 |
4611 | 8203 | 0.729116 | CCTACCTTCGCATGCAACTG | 59.271 | 55.000 | 19.57 | 5.61 | 0.00 | 3.16 |
4753 | 8955 | 3.896122 | TGCTCTAAATGTTTCCGTTTGC | 58.104 | 40.909 | 0.00 | 0.00 | 32.20 | 3.68 |
4817 | 9021 | 0.179032 | TTCTGAACAGGCGGCTTTCA | 60.179 | 50.000 | 24.22 | 24.22 | 0.00 | 2.69 |
4920 | 9124 | 5.243507 | TCCATCAGCTGTTAGCATTTCAAAA | 59.756 | 36.000 | 14.67 | 0.00 | 45.56 | 2.44 |
4958 | 9162 | 2.737252 | CAGCAAGAGGTAACCGAACTTC | 59.263 | 50.000 | 0.00 | 0.00 | 37.17 | 3.01 |
5004 | 9215 | 2.703190 | GCACGACGAAATCTGATGTC | 57.297 | 50.000 | 0.00 | 0.00 | 0.00 | 3.06 |
5005 | 9216 | 2.263077 | GCACGACGAAATCTGATGTCT | 58.737 | 47.619 | 0.00 | 0.00 | 0.00 | 3.41 |
5006 | 9217 | 3.435566 | GCACGACGAAATCTGATGTCTA | 58.564 | 45.455 | 0.00 | 0.00 | 0.00 | 2.59 |
5007 | 9218 | 3.857665 | GCACGACGAAATCTGATGTCTAA | 59.142 | 43.478 | 0.00 | 0.00 | 0.00 | 2.10 |
5008 | 9219 | 4.326278 | GCACGACGAAATCTGATGTCTAAA | 59.674 | 41.667 | 0.00 | 0.00 | 0.00 | 1.85 |
5009 | 9220 | 5.163992 | GCACGACGAAATCTGATGTCTAAAA | 60.164 | 40.000 | 0.00 | 0.00 | 0.00 | 1.52 |
5010 | 9221 | 6.461816 | CACGACGAAATCTGATGTCTAAAAG | 58.538 | 40.000 | 0.00 | 0.00 | 0.00 | 2.27 |
5011 | 9222 | 5.062308 | ACGACGAAATCTGATGTCTAAAAGC | 59.938 | 40.000 | 0.00 | 0.00 | 0.00 | 3.51 |
5012 | 9223 | 5.062183 | CGACGAAATCTGATGTCTAAAAGCA | 59.938 | 40.000 | 6.28 | 0.00 | 0.00 | 3.91 |
5013 | 9224 | 6.237942 | CGACGAAATCTGATGTCTAAAAGCAT | 60.238 | 38.462 | 6.28 | 0.00 | 0.00 | 3.79 |
5014 | 9225 | 7.383102 | ACGAAATCTGATGTCTAAAAGCATT | 57.617 | 32.000 | 6.28 | 0.00 | 0.00 | 3.56 |
5015 | 9226 | 8.492673 | ACGAAATCTGATGTCTAAAAGCATTA | 57.507 | 30.769 | 6.28 | 0.00 | 0.00 | 1.90 |
5016 | 9227 | 8.607459 | ACGAAATCTGATGTCTAAAAGCATTAG | 58.393 | 33.333 | 6.28 | 3.56 | 32.23 | 1.73 |
5017 | 9228 | 8.607459 | CGAAATCTGATGTCTAAAAGCATTAGT | 58.393 | 33.333 | 6.28 | 0.00 | 32.64 | 2.24 |
5018 | 9229 | 9.928236 | GAAATCTGATGTCTAAAAGCATTAGTC | 57.072 | 33.333 | 0.39 | 4.95 | 32.64 | 2.59 |
5111 | 9370 | 8.755028 | TGAACAGCTAAATGTATTACTAGGACA | 58.245 | 33.333 | 0.00 | 0.00 | 31.70 | 4.02 |
5165 | 9425 | 8.506921 | TGGGTAAAAATGATAATATGGTCAGGA | 58.493 | 33.333 | 0.00 | 0.00 | 0.00 | 3.86 |
5179 | 9439 | 8.923838 | ATATGGTCAGGAATCTATGGAGTATT | 57.076 | 34.615 | 0.00 | 0.00 | 0.00 | 1.89 |
5187 | 9447 | 5.866633 | GGAATCTATGGAGTATTGCTCTTCG | 59.133 | 44.000 | 1.69 | 0.00 | 43.62 | 3.79 |
5202 | 9463 | 2.218603 | TCTTCGAAAAAGTGTGGCCTC | 58.781 | 47.619 | 3.32 | 0.00 | 0.00 | 4.70 |
5228 | 9490 | 5.294060 | GCAATATTTGTGGCCCTATTGTTTG | 59.706 | 40.000 | 0.00 | 0.00 | 35.17 | 2.93 |
5238 | 9500 | 3.244044 | GCCCTATTGTTTGCTTTGGTTCA | 60.244 | 43.478 | 0.00 | 0.00 | 0.00 | 3.18 |
5348 | 9610 | 6.433404 | CCATATCTGCCATAAAAGAAGCTGAT | 59.567 | 38.462 | 8.05 | 8.05 | 43.52 | 2.90 |
5414 | 9676 | 0.528466 | TAGATCGCAGCTTCTTGCCG | 60.528 | 55.000 | 0.50 | 0.00 | 44.23 | 5.69 |
5424 | 9686 | 2.237392 | AGCTTCTTGCCGATACCTTCTT | 59.763 | 45.455 | 0.00 | 0.00 | 44.23 | 2.52 |
5473 | 9735 | 3.003394 | TGTTAGGCAGAACATCATGGG | 57.997 | 47.619 | 1.29 | 0.00 | 34.40 | 4.00 |
5502 | 9766 | 1.262417 | CTGATGTTCGATCCGGCATTG | 59.738 | 52.381 | 0.00 | 0.00 | 0.00 | 2.82 |
5536 | 9827 | 5.752955 | TGAAACGTAACTATAATTACCCGGC | 59.247 | 40.000 | 0.00 | 0.00 | 32.36 | 6.13 |
5537 | 9828 | 3.900941 | ACGTAACTATAATTACCCGGCG | 58.099 | 45.455 | 0.00 | 0.00 | 32.36 | 6.46 |
5540 | 9831 | 4.558496 | CGTAACTATAATTACCCGGCGGAA | 60.558 | 45.833 | 30.79 | 15.87 | 32.36 | 4.30 |
5606 | 9897 | 0.810031 | ACAAGCTTGTTCGTCGCTGT | 60.810 | 50.000 | 26.36 | 0.00 | 38.47 | 4.40 |
5735 | 10026 | 4.455877 | AGTTCAGGCTTTAAGATTGAACCG | 59.544 | 41.667 | 24.57 | 4.89 | 45.30 | 4.44 |
5771 | 10062 | 6.594159 | AGGACACACTTAATAACGAGGAATTG | 59.406 | 38.462 | 0.00 | 0.00 | 0.00 | 2.32 |
5773 | 10064 | 7.094933 | GGACACACTTAATAACGAGGAATTGTT | 60.095 | 37.037 | 0.00 | 0.00 | 0.00 | 2.83 |
5774 | 10065 | 8.161699 | ACACACTTAATAACGAGGAATTGTTT | 57.838 | 30.769 | 0.00 | 0.00 | 0.00 | 2.83 |
5775 | 10066 | 8.626526 | ACACACTTAATAACGAGGAATTGTTTT | 58.373 | 29.630 | 0.00 | 0.00 | 0.00 | 2.43 |
5952 | 10263 | 1.915078 | CGATGACTGGCCCTTCCCTT | 61.915 | 60.000 | 0.00 | 0.00 | 0.00 | 3.95 |
5973 | 10284 | 2.835156 | TGTGTCCAGTTCCCATTCGATA | 59.165 | 45.455 | 0.00 | 0.00 | 0.00 | 2.92 |
6197 | 10523 | 2.035576 | ACTGTTGGGTCTCAAGTACGAC | 59.964 | 50.000 | 0.00 | 0.00 | 35.80 | 4.34 |
6204 | 10530 | 3.285484 | GGTCTCAAGTACGACTGGGATA | 58.715 | 50.000 | 0.00 | 0.00 | 0.00 | 2.59 |
6312 | 10640 | 7.690952 | TTCTCTACTCTCCTCTCAGTTTTAC | 57.309 | 40.000 | 0.00 | 0.00 | 0.00 | 2.01 |
6316 | 10644 | 8.480133 | TCTACTCTCCTCTCAGTTTTACTTTT | 57.520 | 34.615 | 0.00 | 0.00 | 0.00 | 2.27 |
6317 | 10645 | 9.584008 | TCTACTCTCCTCTCAGTTTTACTTTTA | 57.416 | 33.333 | 0.00 | 0.00 | 0.00 | 1.52 |
6332 | 10660 | 9.010366 | GTTTTACTTTTATTTCATCGATGAGGC | 57.990 | 33.333 | 25.95 | 2.24 | 38.19 | 4.70 |
6397 | 10779 | 4.081752 | ACTTGAGTTTGTGTTGCCAATCAA | 60.082 | 37.500 | 0.00 | 0.00 | 0.00 | 2.57 |
6404 | 10786 | 2.273557 | GTGTTGCCAATCAATGCATCC | 58.726 | 47.619 | 0.00 | 0.00 | 37.33 | 3.51 |
6409 | 10791 | 2.431419 | TGCCAATCAATGCATCCGAAAT | 59.569 | 40.909 | 0.00 | 0.00 | 31.31 | 2.17 |
6432 | 10982 | 2.927477 | TCCGTGCTACTATTTCGCAAAG | 59.073 | 45.455 | 0.00 | 0.00 | 35.16 | 2.77 |
6448 | 11000 | 8.948853 | TTTCGCAAAGAAAAGTGATATAACTG | 57.051 | 30.769 | 0.00 | 0.00 | 45.05 | 3.16 |
6453 | 11005 | 7.062255 | GCAAAGAAAAGTGATATAACTGCAACC | 59.938 | 37.037 | 0.00 | 0.00 | 0.00 | 3.77 |
6456 | 11008 | 7.168219 | AGAAAAGTGATATAACTGCAACCAGA | 58.832 | 34.615 | 0.00 | 0.00 | 41.77 | 3.86 |
6457 | 11009 | 6.992063 | AAAGTGATATAACTGCAACCAGAG | 57.008 | 37.500 | 0.00 | 0.00 | 41.77 | 3.35 |
6458 | 11010 | 5.683876 | AGTGATATAACTGCAACCAGAGT | 57.316 | 39.130 | 0.00 | 0.00 | 41.77 | 3.24 |
6504 | 11079 | 7.013178 | TGCAAACTTTGAGTCAACATATCTGAA | 59.987 | 33.333 | 4.68 | 0.00 | 0.00 | 3.02 |
6572 | 12224 | 1.870055 | GCTGTGGCTGGGATGTTGTG | 61.870 | 60.000 | 0.00 | 0.00 | 35.22 | 3.33 |
6682 | 12334 | 0.251341 | GGTTGCAACATCAGGGAGGT | 60.251 | 55.000 | 29.55 | 0.00 | 0.00 | 3.85 |
6713 | 12365 | 6.814954 | AGATCCACTGGATTGTGTATAAGT | 57.185 | 37.500 | 12.09 | 0.00 | 43.27 | 2.24 |
6731 | 12383 | 1.987306 | TAGCAGCACATGGACCGGA | 60.987 | 57.895 | 9.46 | 0.00 | 0.00 | 5.14 |
6841 | 12493 | 2.485659 | TCTGGGAGGCTCAGATGAATT | 58.514 | 47.619 | 17.69 | 0.00 | 36.46 | 2.17 |
6860 | 12512 | 6.142139 | TGAATTGTAACAAGTGCTTTCATCG | 58.858 | 36.000 | 0.00 | 0.00 | 0.00 | 3.84 |
6866 | 12518 | 1.792367 | CAAGTGCTTTCATCGTCGTGA | 59.208 | 47.619 | 0.00 | 0.00 | 0.00 | 4.35 |
6867 | 12519 | 2.148916 | AGTGCTTTCATCGTCGTGAA | 57.851 | 45.000 | 6.27 | 6.27 | 36.38 | 3.18 |
6895 | 12547 | 9.582648 | AGTAACAAGGATAAAACCTACAAATGT | 57.417 | 29.630 | 0.00 | 0.00 | 39.62 | 2.71 |
6898 | 12550 | 8.650143 | ACAAGGATAAAACCTACAAATGTGAT | 57.350 | 30.769 | 0.00 | 0.00 | 39.62 | 3.06 |
6916 | 12568 | 2.182537 | GGCAGCTCCAATTTGGCG | 59.817 | 61.111 | 10.76 | 5.77 | 37.47 | 5.69 |
6936 | 12785 | 4.022416 | GGCGCCACAATCCATAATAAATGA | 60.022 | 41.667 | 24.80 | 0.00 | 0.00 | 2.57 |
6957 | 12806 | 8.820153 | AATGAGCCTTTTATGAGAGAAATCTT | 57.180 | 30.769 | 0.00 | 0.00 | 0.00 | 2.40 |
6989 | 12838 | 6.867662 | ATTTTGTGACTACCTTGTCTTCTG | 57.132 | 37.500 | 0.00 | 0.00 | 37.79 | 3.02 |
7000 | 12849 | 3.131223 | CCTTGTCTTCTGCGAGATTAGGA | 59.869 | 47.826 | 0.00 | 0.00 | 33.97 | 2.94 |
7028 | 12877 | 9.405587 | CCAAAATCTTTAACGACATTAATGTGT | 57.594 | 29.630 | 25.42 | 18.78 | 41.95 | 3.72 |
7030 | 12879 | 8.964420 | AAATCTTTAACGACATTAATGTGTGG | 57.036 | 30.769 | 25.42 | 15.65 | 41.95 | 4.17 |
7040 | 12889 | 6.468956 | CGACATTAATGTGTGGCTTGATTAAC | 59.531 | 38.462 | 25.42 | 5.12 | 41.95 | 2.01 |
7042 | 12891 | 5.652994 | TTAATGTGTGGCTTGATTAACCC | 57.347 | 39.130 | 0.00 | 0.00 | 0.00 | 4.11 |
7043 | 12892 | 2.969821 | TGTGTGGCTTGATTAACCCT | 57.030 | 45.000 | 0.00 | 0.00 | 0.00 | 4.34 |
7045 | 12894 | 3.153919 | TGTGTGGCTTGATTAACCCTTC | 58.846 | 45.455 | 0.00 | 0.00 | 0.00 | 3.46 |
7046 | 12895 | 3.153919 | GTGTGGCTTGATTAACCCTTCA | 58.846 | 45.455 | 0.00 | 0.00 | 0.00 | 3.02 |
7047 | 12896 | 3.763897 | GTGTGGCTTGATTAACCCTTCAT | 59.236 | 43.478 | 0.00 | 0.00 | 0.00 | 2.57 |
7049 | 12898 | 4.462483 | TGTGGCTTGATTAACCCTTCATTC | 59.538 | 41.667 | 0.00 | 0.00 | 0.00 | 2.67 |
7069 | 12918 | 7.093992 | TCATTCGGTTCAACTTTCTTGTTTTT | 58.906 | 30.769 | 0.00 | 0.00 | 0.00 | 1.94 |
7070 | 12919 | 6.937886 | TTCGGTTCAACTTTCTTGTTTTTC | 57.062 | 33.333 | 0.00 | 0.00 | 0.00 | 2.29 |
7071 | 12920 | 6.015027 | TCGGTTCAACTTTCTTGTTTTTCA | 57.985 | 33.333 | 0.00 | 0.00 | 0.00 | 2.69 |
7156 | 13005 | 9.762933 | TGGAATATATTTAAGCATTTTTCCTGC | 57.237 | 29.630 | 0.00 | 0.00 | 39.97 | 4.85 |
7167 | 13016 | 4.798387 | GCATTTTTCCTGCATACTTTACCG | 59.202 | 41.667 | 0.00 | 0.00 | 39.46 | 4.02 |
7177 | 13026 | 6.641314 | CCTGCATACTTTACCGTAGATACTTG | 59.359 | 42.308 | 0.00 | 0.00 | 0.00 | 3.16 |
7178 | 13027 | 6.509656 | TGCATACTTTACCGTAGATACTTGG | 58.490 | 40.000 | 0.00 | 0.00 | 0.00 | 3.61 |
7179 | 13028 | 6.321945 | TGCATACTTTACCGTAGATACTTGGA | 59.678 | 38.462 | 0.00 | 0.00 | 0.00 | 3.53 |
7180 | 13029 | 7.014905 | TGCATACTTTACCGTAGATACTTGGAT | 59.985 | 37.037 | 0.00 | 0.00 | 0.00 | 3.41 |
7181 | 13030 | 8.517878 | GCATACTTTACCGTAGATACTTGGATA | 58.482 | 37.037 | 0.00 | 0.00 | 0.00 | 2.59 |
7182 | 13031 | 9.837525 | CATACTTTACCGTAGATACTTGGATAC | 57.162 | 37.037 | 0.00 | 0.00 | 0.00 | 2.24 |
7183 | 13032 | 9.804977 | ATACTTTACCGTAGATACTTGGATACT | 57.195 | 33.333 | 0.00 | 0.00 | 37.61 | 2.12 |
7184 | 13033 | 8.164058 | ACTTTACCGTAGATACTTGGATACTC | 57.836 | 38.462 | 0.00 | 0.00 | 37.61 | 2.59 |
7185 | 13034 | 7.997803 | ACTTTACCGTAGATACTTGGATACTCT | 59.002 | 37.037 | 0.00 | 0.00 | 37.61 | 3.24 |
7186 | 13035 | 7.976135 | TTACCGTAGATACTTGGATACTCTC | 57.024 | 40.000 | 0.00 | 0.00 | 37.61 | 3.20 |
7187 | 13036 | 5.938279 | ACCGTAGATACTTGGATACTCTCA | 58.062 | 41.667 | 0.00 | 0.00 | 37.61 | 3.27 |
7307 | 13156 | 0.966179 | ACACCGCAGTACATGACTCA | 59.034 | 50.000 | 0.00 | 0.00 | 35.64 | 3.41 |
7393 | 13242 | 6.239289 | GGAACAAACTCCCTTTCATTCATCAA | 60.239 | 38.462 | 0.00 | 0.00 | 0.00 | 2.57 |
7396 | 13245 | 6.268387 | ACAAACTCCCTTTCATTCATCAATGT | 59.732 | 34.615 | 0.00 | 0.00 | 40.47 | 2.71 |
7432 | 13281 | 0.981183 | AGGTGTCCATAAGCCGAACA | 59.019 | 50.000 | 0.00 | 0.00 | 0.00 | 3.18 |
7459 | 13308 | 5.946942 | AAGCTATCACTTGAGAGGATTGA | 57.053 | 39.130 | 3.18 | 0.00 | 34.19 | 2.57 |
7460 | 13309 | 6.497624 | AAGCTATCACTTGAGAGGATTGAT | 57.502 | 37.500 | 3.18 | 0.00 | 34.19 | 2.57 |
7499 | 13350 | 1.472480 | GATTGCACCATTACTTGCCGT | 59.528 | 47.619 | 0.00 | 0.00 | 38.00 | 5.68 |
7585 | 13438 | 7.534578 | CGCCTCGTTACAATTAAAAATAACACA | 59.465 | 33.333 | 6.81 | 0.00 | 0.00 | 3.72 |
7654 | 13507 | 0.840288 | ACACCCACACTGCCATCCTA | 60.840 | 55.000 | 0.00 | 0.00 | 0.00 | 2.94 |
7735 | 13588 | 5.596361 | TGGCATTTCATATCGTACCCATTTT | 59.404 | 36.000 | 0.00 | 0.00 | 0.00 | 1.82 |
7754 | 13607 | 9.868277 | CCCATTTTTCTTTTTGTACATATGCTA | 57.132 | 29.630 | 1.58 | 0.00 | 0.00 | 3.49 |
7785 | 13638 | 7.715266 | AACTTTAGTAATCTACTCCTTCCGT | 57.285 | 36.000 | 0.00 | 0.00 | 40.14 | 4.69 |
7786 | 13639 | 7.715266 | ACTTTAGTAATCTACTCCTTCCGTT | 57.285 | 36.000 | 0.00 | 0.00 | 40.14 | 4.44 |
7787 | 13640 | 7.770201 | ACTTTAGTAATCTACTCCTTCCGTTC | 58.230 | 38.462 | 0.00 | 0.00 | 40.14 | 3.95 |
7788 | 13641 | 6.705863 | TTAGTAATCTACTCCTTCCGTTCC | 57.294 | 41.667 | 0.00 | 0.00 | 40.14 | 3.62 |
7789 | 13642 | 4.869451 | AGTAATCTACTCCTTCCGTTCCT | 58.131 | 43.478 | 0.00 | 0.00 | 32.47 | 3.36 |
7790 | 13643 | 6.011122 | AGTAATCTACTCCTTCCGTTCCTA | 57.989 | 41.667 | 0.00 | 0.00 | 32.47 | 2.94 |
7791 | 13644 | 6.430007 | AGTAATCTACTCCTTCCGTTCCTAA | 58.570 | 40.000 | 0.00 | 0.00 | 32.47 | 2.69 |
7792 | 13645 | 6.894103 | AGTAATCTACTCCTTCCGTTCCTAAA | 59.106 | 38.462 | 0.00 | 0.00 | 32.47 | 1.85 |
7793 | 13646 | 6.809976 | AATCTACTCCTTCCGTTCCTAAAT | 57.190 | 37.500 | 0.00 | 0.00 | 0.00 | 1.40 |
7794 | 13647 | 7.909485 | AATCTACTCCTTCCGTTCCTAAATA | 57.091 | 36.000 | 0.00 | 0.00 | 0.00 | 1.40 |
7795 | 13648 | 6.705863 | TCTACTCCTTCCGTTCCTAAATAC | 57.294 | 41.667 | 0.00 | 0.00 | 0.00 | 1.89 |
7796 | 13649 | 6.430007 | TCTACTCCTTCCGTTCCTAAATACT | 58.570 | 40.000 | 0.00 | 0.00 | 0.00 | 2.12 |
7797 | 13650 | 6.894103 | TCTACTCCTTCCGTTCCTAAATACTT | 59.106 | 38.462 | 0.00 | 0.00 | 0.00 | 2.24 |
7798 | 13651 | 5.731591 | ACTCCTTCCGTTCCTAAATACTTG | 58.268 | 41.667 | 0.00 | 0.00 | 0.00 | 3.16 |
7799 | 13652 | 5.247792 | ACTCCTTCCGTTCCTAAATACTTGT | 59.752 | 40.000 | 0.00 | 0.00 | 0.00 | 3.16 |
7800 | 13653 | 5.727434 | TCCTTCCGTTCCTAAATACTTGTC | 58.273 | 41.667 | 0.00 | 0.00 | 0.00 | 3.18 |
7801 | 13654 | 5.482878 | TCCTTCCGTTCCTAAATACTTGTCT | 59.517 | 40.000 | 0.00 | 0.00 | 0.00 | 3.41 |
7802 | 13655 | 6.013984 | TCCTTCCGTTCCTAAATACTTGTCTT | 60.014 | 38.462 | 0.00 | 0.00 | 0.00 | 3.01 |
7803 | 13656 | 6.653740 | CCTTCCGTTCCTAAATACTTGTCTTT | 59.346 | 38.462 | 0.00 | 0.00 | 0.00 | 2.52 |
7804 | 13657 | 7.148457 | CCTTCCGTTCCTAAATACTTGTCTTTC | 60.148 | 40.741 | 0.00 | 0.00 | 0.00 | 2.62 |
7805 | 13658 | 7.001099 | TCCGTTCCTAAATACTTGTCTTTCT | 57.999 | 36.000 | 0.00 | 0.00 | 0.00 | 2.52 |
7806 | 13659 | 8.125978 | TCCGTTCCTAAATACTTGTCTTTCTA | 57.874 | 34.615 | 0.00 | 0.00 | 0.00 | 2.10 |
7807 | 13660 | 8.248945 | TCCGTTCCTAAATACTTGTCTTTCTAG | 58.751 | 37.037 | 0.00 | 0.00 | 0.00 | 2.43 |
7808 | 13661 | 8.248945 | CCGTTCCTAAATACTTGTCTTTCTAGA | 58.751 | 37.037 | 0.00 | 0.00 | 0.00 | 2.43 |
7809 | 13662 | 9.291664 | CGTTCCTAAATACTTGTCTTTCTAGAG | 57.708 | 37.037 | 0.00 | 0.00 | 0.00 | 2.43 |
7832 | 13685 | 9.355215 | AGAGATTTTAACAAGTGACTACATACG | 57.645 | 33.333 | 0.00 | 0.00 | 0.00 | 3.06 |
7833 | 13686 | 8.475331 | AGATTTTAACAAGTGACTACATACGG | 57.525 | 34.615 | 0.00 | 0.00 | 0.00 | 4.02 |
7834 | 13687 | 6.470557 | TTTTAACAAGTGACTACATACGGC | 57.529 | 37.500 | 0.00 | 0.00 | 0.00 | 5.68 |
7835 | 13688 | 2.273370 | ACAAGTGACTACATACGGCG | 57.727 | 50.000 | 4.80 | 4.80 | 0.00 | 6.46 |
7836 | 13689 | 0.921347 | CAAGTGACTACATACGGCGC | 59.079 | 55.000 | 6.90 | 0.00 | 0.00 | 6.53 |
7837 | 13690 | 0.528924 | AAGTGACTACATACGGCGCA | 59.471 | 50.000 | 10.83 | 0.00 | 0.00 | 6.09 |
7838 | 13691 | 0.528924 | AGTGACTACATACGGCGCAA | 59.471 | 50.000 | 10.83 | 0.00 | 0.00 | 4.85 |
7839 | 13692 | 1.067425 | AGTGACTACATACGGCGCAAA | 60.067 | 47.619 | 10.83 | 0.00 | 0.00 | 3.68 |
7840 | 13693 | 1.727880 | GTGACTACATACGGCGCAAAA | 59.272 | 47.619 | 10.83 | 0.00 | 0.00 | 2.44 |
7841 | 13694 | 2.350498 | GTGACTACATACGGCGCAAAAT | 59.650 | 45.455 | 10.83 | 0.00 | 0.00 | 1.82 |
7842 | 13695 | 2.350192 | TGACTACATACGGCGCAAAATG | 59.650 | 45.455 | 10.83 | 11.57 | 0.00 | 2.32 |
7843 | 13696 | 2.605818 | GACTACATACGGCGCAAAATGA | 59.394 | 45.455 | 10.83 | 0.00 | 0.00 | 2.57 |
7844 | 13697 | 2.607635 | ACTACATACGGCGCAAAATGAG | 59.392 | 45.455 | 10.83 | 10.39 | 0.00 | 2.90 |
7845 | 13698 | 1.448985 | ACATACGGCGCAAAATGAGT | 58.551 | 45.000 | 10.83 | 0.00 | 0.00 | 3.41 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
179 | 180 | 8.199928 | CTACAGCTAACGTATAGCAGTAGCGT | 62.200 | 46.154 | 27.80 | 20.55 | 46.14 | 5.07 |
311 | 312 | 4.752879 | TAGCACGGGTTCCTGCGC | 62.753 | 66.667 | 0.00 | 0.00 | 38.51 | 6.09 |
975 | 976 | 2.545113 | CGTCTCAAGGTCTCACGGAAAA | 60.545 | 50.000 | 0.00 | 0.00 | 0.00 | 2.29 |
976 | 977 | 1.000607 | CGTCTCAAGGTCTCACGGAAA | 60.001 | 52.381 | 0.00 | 0.00 | 0.00 | 3.13 |
981 | 982 | 0.966920 | TTCCCGTCTCAAGGTCTCAC | 59.033 | 55.000 | 0.00 | 0.00 | 0.00 | 3.51 |
1028 | 1029 | 1.535444 | TCCACCTCCACGTCCATGT | 60.535 | 57.895 | 0.00 | 0.00 | 0.00 | 3.21 |
1197 | 1198 | 1.497722 | GAAGTTGAAGGCGCGAAGG | 59.502 | 57.895 | 12.10 | 0.00 | 0.00 | 3.46 |
1198 | 1199 | 1.497722 | GGAAGTTGAAGGCGCGAAG | 59.502 | 57.895 | 12.10 | 0.00 | 0.00 | 3.79 |
1200 | 1201 | 2.736995 | CGGAAGTTGAAGGCGCGA | 60.737 | 61.111 | 12.10 | 0.00 | 0.00 | 5.87 |
1239 | 1240 | 4.080526 | AGAGGACCTTGTTGTTGTTGTAGT | 60.081 | 41.667 | 0.00 | 0.00 | 0.00 | 2.73 |
1242 | 1243 | 3.279434 | GAGAGGACCTTGTTGTTGTTGT | 58.721 | 45.455 | 0.00 | 0.00 | 0.00 | 3.32 |
1243 | 1244 | 2.618709 | GGAGAGGACCTTGTTGTTGTTG | 59.381 | 50.000 | 0.00 | 0.00 | 0.00 | 3.33 |
1244 | 1245 | 2.509964 | AGGAGAGGACCTTGTTGTTGTT | 59.490 | 45.455 | 0.00 | 0.00 | 36.86 | 2.83 |
1262 | 1263 | 0.637195 | CAAGGGTAGGGAGGAGAGGA | 59.363 | 60.000 | 0.00 | 0.00 | 0.00 | 3.71 |
1276 | 1277 | 4.697756 | TCGACAAGCGGCCAAGGG | 62.698 | 66.667 | 2.24 | 0.00 | 41.33 | 3.95 |
1277 | 1278 | 3.423154 | GTCGACAAGCGGCCAAGG | 61.423 | 66.667 | 11.55 | 0.00 | 39.08 | 3.61 |
1285 | 1286 | 1.480219 | CCGCGGATAAGTCGACAAGC | 61.480 | 60.000 | 24.07 | 8.01 | 0.00 | 4.01 |
1294 | 1295 | 4.868450 | TCACAAATTAACCGCGGATAAG | 57.132 | 40.909 | 35.90 | 20.40 | 0.00 | 1.73 |
1298 | 1299 | 2.768698 | TCTTCACAAATTAACCGCGGA | 58.231 | 42.857 | 35.90 | 10.61 | 0.00 | 5.54 |
1299 | 1300 | 3.757745 | ATCTTCACAAATTAACCGCGG | 57.242 | 42.857 | 26.86 | 26.86 | 0.00 | 6.46 |
1300 | 1301 | 6.035650 | TCTCTAATCTTCACAAATTAACCGCG | 59.964 | 38.462 | 0.00 | 0.00 | 0.00 | 6.46 |
1301 | 1302 | 7.148474 | TGTCTCTAATCTTCACAAATTAACCGC | 60.148 | 37.037 | 0.00 | 0.00 | 0.00 | 5.68 |
1303 | 1304 | 9.436957 | TCTGTCTCTAATCTTCACAAATTAACC | 57.563 | 33.333 | 0.00 | 0.00 | 0.00 | 2.85 |
1317 | 1323 | 8.646900 | AGAACCCAGATAATTCTGTCTCTAATC | 58.353 | 37.037 | 2.61 | 0.00 | 46.71 | 1.75 |
1318 | 1324 | 8.560124 | AGAACCCAGATAATTCTGTCTCTAAT | 57.440 | 34.615 | 2.61 | 0.00 | 46.71 | 1.73 |
1322 | 1328 | 7.929941 | AAAAGAACCCAGATAATTCTGTCTC | 57.070 | 36.000 | 2.61 | 0.00 | 46.71 | 3.36 |
1346 | 1352 | 5.269505 | TCGCCTCAAAAGAAAAATGGAAA | 57.730 | 34.783 | 0.00 | 0.00 | 0.00 | 3.13 |
1349 | 1355 | 2.989166 | GCTCGCCTCAAAAGAAAAATGG | 59.011 | 45.455 | 0.00 | 0.00 | 0.00 | 3.16 |
1351 | 1357 | 2.552315 | TCGCTCGCCTCAAAAGAAAAAT | 59.448 | 40.909 | 0.00 | 0.00 | 0.00 | 1.82 |
1359 | 1365 | 0.955428 | AAAGCATCGCTCGCCTCAAA | 60.955 | 50.000 | 0.00 | 0.00 | 38.25 | 2.69 |
1370 | 1376 | 3.535561 | ACTTCTGGTGGATAAAGCATCG | 58.464 | 45.455 | 0.00 | 0.00 | 34.12 | 3.84 |
1379 | 1385 | 9.490083 | ACTACTTAGTATAAACTTCTGGTGGAT | 57.510 | 33.333 | 0.00 | 0.00 | 37.15 | 3.41 |
1380 | 1386 | 8.890410 | ACTACTTAGTATAAACTTCTGGTGGA | 57.110 | 34.615 | 0.00 | 0.00 | 37.15 | 4.02 |
1396 | 1402 | 9.762933 | GCAGACAGTATAGTACTACTACTTAGT | 57.237 | 37.037 | 4.31 | 9.12 | 43.89 | 2.24 |
1397 | 1403 | 9.985730 | AGCAGACAGTATAGTACTACTACTTAG | 57.014 | 37.037 | 4.31 | 6.54 | 37.23 | 2.18 |
1400 | 1406 | 8.020777 | TCAGCAGACAGTATAGTACTACTACT | 57.979 | 38.462 | 4.31 | 11.00 | 37.23 | 2.57 |
1401 | 1407 | 8.143193 | TCTCAGCAGACAGTATAGTACTACTAC | 58.857 | 40.741 | 4.31 | 9.07 | 37.23 | 2.73 |
1402 | 1408 | 8.247666 | TCTCAGCAGACAGTATAGTACTACTA | 57.752 | 38.462 | 4.31 | 0.00 | 37.23 | 1.82 |
1403 | 1409 | 7.127012 | TCTCAGCAGACAGTATAGTACTACT | 57.873 | 40.000 | 4.31 | 0.00 | 37.23 | 2.57 |
1404 | 1410 | 7.789273 | TTCTCAGCAGACAGTATAGTACTAC | 57.211 | 40.000 | 4.31 | 0.00 | 37.23 | 2.73 |
1405 | 1411 | 8.047911 | AGTTTCTCAGCAGACAGTATAGTACTA | 58.952 | 37.037 | 4.77 | 4.77 | 37.23 | 1.82 |
1406 | 1412 | 6.887545 | AGTTTCTCAGCAGACAGTATAGTACT | 59.112 | 38.462 | 0.00 | 0.00 | 40.28 | 2.73 |
1407 | 1413 | 7.090953 | AGTTTCTCAGCAGACAGTATAGTAC | 57.909 | 40.000 | 0.00 | 0.00 | 0.00 | 2.73 |
1408 | 1414 | 7.612244 | AGAAGTTTCTCAGCAGACAGTATAGTA | 59.388 | 37.037 | 0.00 | 0.00 | 29.94 | 1.82 |
1409 | 1415 | 6.435904 | AGAAGTTTCTCAGCAGACAGTATAGT | 59.564 | 38.462 | 0.00 | 0.00 | 29.94 | 2.12 |
1410 | 1416 | 6.862209 | AGAAGTTTCTCAGCAGACAGTATAG | 58.138 | 40.000 | 0.00 | 0.00 | 29.94 | 1.31 |
1455 | 1461 | 1.992170 | GCAGGATTGCTTTGCTTCTG | 58.008 | 50.000 | 0.00 | 0.00 | 46.95 | 3.02 |
1462 | 1468 | 7.383824 | ACGATAGGTTAGGCAGGATTGCTTT | 62.384 | 44.000 | 0.00 | 0.00 | 46.01 | 3.51 |
1477 | 1483 | 8.761497 | CATCATTGTTAATTACGACGATAGGTT | 58.239 | 33.333 | 0.00 | 0.00 | 43.77 | 3.50 |
1485 | 1491 | 6.687105 | GGCTGTTCATCATTGTTAATTACGAC | 59.313 | 38.462 | 0.00 | 0.00 | 0.00 | 4.34 |
1496 | 1502 | 9.976511 | ATTTTAATCTATGGCTGTTCATCATTG | 57.023 | 29.630 | 0.00 | 0.00 | 0.00 | 2.82 |
1499 | 1505 | 7.520453 | GCGATTTTAATCTATGGCTGTTCATCA | 60.520 | 37.037 | 0.00 | 0.00 | 33.24 | 3.07 |
1502 | 1508 | 5.277297 | CGCGATTTTAATCTATGGCTGTTCA | 60.277 | 40.000 | 0.00 | 0.00 | 33.24 | 3.18 |
1503 | 1509 | 5.140177 | CGCGATTTTAATCTATGGCTGTTC | 58.860 | 41.667 | 0.00 | 0.00 | 33.24 | 3.18 |
1504 | 1510 | 4.024048 | CCGCGATTTTAATCTATGGCTGTT | 60.024 | 41.667 | 8.23 | 0.00 | 33.24 | 3.16 |
1506 | 1512 | 3.120199 | CCCGCGATTTTAATCTATGGCTG | 60.120 | 47.826 | 8.23 | 0.00 | 33.24 | 4.85 |
1507 | 1513 | 3.074412 | CCCGCGATTTTAATCTATGGCT | 58.926 | 45.455 | 8.23 | 0.00 | 33.24 | 4.75 |
1508 | 1514 | 3.071479 | TCCCGCGATTTTAATCTATGGC | 58.929 | 45.455 | 8.23 | 0.00 | 33.24 | 4.40 |
1509 | 1515 | 4.566004 | TCTCCCGCGATTTTAATCTATGG | 58.434 | 43.478 | 8.23 | 0.00 | 33.24 | 2.74 |
1510 | 1516 | 6.018262 | TGTTTCTCCCGCGATTTTAATCTATG | 60.018 | 38.462 | 8.23 | 0.00 | 33.24 | 2.23 |
1511 | 1517 | 6.053005 | TGTTTCTCCCGCGATTTTAATCTAT | 58.947 | 36.000 | 8.23 | 0.00 | 33.24 | 1.98 |
1512 | 1518 | 5.421277 | TGTTTCTCCCGCGATTTTAATCTA | 58.579 | 37.500 | 8.23 | 0.00 | 33.24 | 1.98 |
1513 | 1519 | 4.258543 | TGTTTCTCCCGCGATTTTAATCT | 58.741 | 39.130 | 8.23 | 0.00 | 33.24 | 2.40 |
1514 | 1520 | 4.609691 | TGTTTCTCCCGCGATTTTAATC | 57.390 | 40.909 | 8.23 | 0.00 | 0.00 | 1.75 |
1515 | 1521 | 5.576447 | ATTGTTTCTCCCGCGATTTTAAT | 57.424 | 34.783 | 8.23 | 0.00 | 0.00 | 1.40 |
1516 | 1522 | 5.379732 | AATTGTTTCTCCCGCGATTTTAA | 57.620 | 34.783 | 8.23 | 0.00 | 0.00 | 1.52 |
1517 | 1523 | 5.048643 | TGAAATTGTTTCTCCCGCGATTTTA | 60.049 | 36.000 | 8.23 | 0.00 | 40.32 | 1.52 |
1518 | 1524 | 3.934457 | AATTGTTTCTCCCGCGATTTT | 57.066 | 38.095 | 8.23 | 0.00 | 0.00 | 1.82 |
1519 | 1525 | 3.254657 | TGAAATTGTTTCTCCCGCGATTT | 59.745 | 39.130 | 8.23 | 1.37 | 40.32 | 2.17 |
1520 | 1526 | 2.817258 | TGAAATTGTTTCTCCCGCGATT | 59.183 | 40.909 | 8.23 | 0.00 | 40.32 | 3.34 |
1521 | 1527 | 2.161609 | GTGAAATTGTTTCTCCCGCGAT | 59.838 | 45.455 | 8.23 | 0.00 | 40.32 | 4.58 |
1522 | 1528 | 1.533731 | GTGAAATTGTTTCTCCCGCGA | 59.466 | 47.619 | 8.23 | 0.00 | 40.32 | 5.87 |
1523 | 1529 | 1.724654 | CGTGAAATTGTTTCTCCCGCG | 60.725 | 52.381 | 0.00 | 0.00 | 40.32 | 6.46 |
1524 | 1530 | 1.401018 | CCGTGAAATTGTTTCTCCCGC | 60.401 | 52.381 | 4.32 | 0.00 | 40.32 | 6.13 |
1525 | 1531 | 1.401018 | GCCGTGAAATTGTTTCTCCCG | 60.401 | 52.381 | 4.32 | 4.22 | 40.32 | 5.14 |
1526 | 1532 | 1.401018 | CGCCGTGAAATTGTTTCTCCC | 60.401 | 52.381 | 4.32 | 0.00 | 40.32 | 4.30 |
1527 | 1533 | 1.401018 | CCGCCGTGAAATTGTTTCTCC | 60.401 | 52.381 | 4.32 | 0.00 | 40.32 | 3.71 |
1528 | 1534 | 1.963747 | CCGCCGTGAAATTGTTTCTC | 58.036 | 50.000 | 4.32 | 0.33 | 40.32 | 2.87 |
1529 | 1535 | 0.039527 | GCCGCCGTGAAATTGTTTCT | 60.040 | 50.000 | 4.32 | 0.00 | 40.32 | 2.52 |
1530 | 1536 | 1.006825 | GGCCGCCGTGAAATTGTTTC | 61.007 | 55.000 | 0.00 | 0.00 | 40.08 | 2.78 |
1531 | 1537 | 1.006688 | GGCCGCCGTGAAATTGTTT | 60.007 | 52.632 | 0.00 | 0.00 | 0.00 | 2.83 |
1532 | 1538 | 1.862602 | GAGGCCGCCGTGAAATTGTT | 61.863 | 55.000 | 3.05 | 0.00 | 0.00 | 2.83 |
1533 | 1539 | 2.282180 | AGGCCGCCGTGAAATTGT | 60.282 | 55.556 | 3.05 | 0.00 | 0.00 | 2.71 |
1534 | 1540 | 1.982073 | GAGAGGCCGCCGTGAAATTG | 61.982 | 60.000 | 1.49 | 0.00 | 0.00 | 2.32 |
1535 | 1541 | 1.745489 | GAGAGGCCGCCGTGAAATT | 60.745 | 57.895 | 1.49 | 0.00 | 0.00 | 1.82 |
1536 | 1542 | 2.125106 | GAGAGGCCGCCGTGAAAT | 60.125 | 61.111 | 1.49 | 0.00 | 0.00 | 2.17 |
1537 | 1543 | 4.388499 | GGAGAGGCCGCCGTGAAA | 62.388 | 66.667 | 1.49 | 0.00 | 0.00 | 2.69 |
1543 | 1549 | 4.785453 | CTGTTGGGAGAGGCCGCC | 62.785 | 72.222 | 1.49 | 0.00 | 37.63 | 6.13 |
1545 | 1551 | 1.690219 | ATAGCTGTTGGGAGAGGCCG | 61.690 | 60.000 | 0.00 | 0.00 | 37.63 | 6.13 |
1546 | 1552 | 1.346068 | CTATAGCTGTTGGGAGAGGCC | 59.654 | 57.143 | 0.00 | 0.00 | 0.00 | 5.19 |
1547 | 1553 | 1.270571 | GCTATAGCTGTTGGGAGAGGC | 60.271 | 57.143 | 17.75 | 0.00 | 38.21 | 4.70 |
1548 | 1554 | 1.000283 | CGCTATAGCTGTTGGGAGAGG | 60.000 | 57.143 | 21.98 | 0.00 | 39.32 | 3.69 |
1549 | 1555 | 1.000283 | CCGCTATAGCTGTTGGGAGAG | 60.000 | 57.143 | 21.98 | 2.85 | 39.32 | 3.20 |
1550 | 1556 | 1.040646 | CCGCTATAGCTGTTGGGAGA | 58.959 | 55.000 | 21.98 | 0.00 | 39.32 | 3.71 |
1551 | 1557 | 0.601311 | GCCGCTATAGCTGTTGGGAG | 60.601 | 60.000 | 21.98 | 4.26 | 39.32 | 4.30 |
1552 | 1558 | 1.445942 | GCCGCTATAGCTGTTGGGA | 59.554 | 57.895 | 21.98 | 0.00 | 39.32 | 4.37 |
1553 | 1559 | 1.598130 | GGCCGCTATAGCTGTTGGG | 60.598 | 63.158 | 21.98 | 15.76 | 39.32 | 4.12 |
1554 | 1560 | 1.956170 | CGGCCGCTATAGCTGTTGG | 60.956 | 63.158 | 21.98 | 16.11 | 39.32 | 3.77 |
1555 | 1561 | 2.598632 | GCGGCCGCTATAGCTGTTG | 61.599 | 63.158 | 41.71 | 12.86 | 38.92 | 3.33 |
1556 | 1562 | 2.280186 | GCGGCCGCTATAGCTGTT | 60.280 | 61.111 | 41.71 | 0.00 | 38.92 | 3.16 |
1557 | 1563 | 4.301027 | GGCGGCCGCTATAGCTGT | 62.301 | 66.667 | 45.23 | 0.00 | 41.60 | 4.40 |
1558 | 1564 | 2.225791 | TATGGCGGCCGCTATAGCTG | 62.226 | 60.000 | 41.59 | 16.77 | 42.29 | 4.24 |
1559 | 1565 | 1.982395 | TATGGCGGCCGCTATAGCT | 60.982 | 57.895 | 41.59 | 28.21 | 42.29 | 3.32 |
1560 | 1566 | 2.577059 | TATGGCGGCCGCTATAGC | 59.423 | 61.111 | 41.59 | 29.45 | 42.29 | 2.97 |
1562 | 1568 | 2.577059 | GCTATGGCGGCCGCTATA | 59.423 | 61.111 | 41.64 | 41.64 | 42.29 | 1.31 |
1573 | 1579 | 2.332514 | CGCAATTGCCCGCTATGG | 59.667 | 61.111 | 24.24 | 4.09 | 37.91 | 2.74 |
1574 | 1580 | 2.332514 | CCGCAATTGCCCGCTATG | 59.667 | 61.111 | 24.24 | 8.44 | 37.91 | 2.23 |
1575 | 1581 | 3.595758 | GCCGCAATTGCCCGCTAT | 61.596 | 61.111 | 24.24 | 0.00 | 37.91 | 2.97 |
1578 | 1584 | 2.897641 | TATTTGCCGCAATTGCCCGC | 62.898 | 55.000 | 24.24 | 23.88 | 37.91 | 6.13 |
1579 | 1585 | 0.871163 | CTATTTGCCGCAATTGCCCG | 60.871 | 55.000 | 24.24 | 15.39 | 37.91 | 6.13 |
1580 | 1586 | 1.153597 | GCTATTTGCCGCAATTGCCC | 61.154 | 55.000 | 24.24 | 15.66 | 37.91 | 5.36 |
1581 | 1587 | 1.481819 | CGCTATTTGCCGCAATTGCC | 61.482 | 55.000 | 24.24 | 12.00 | 38.78 | 4.52 |
1582 | 1588 | 1.481819 | CCGCTATTTGCCGCAATTGC | 61.482 | 55.000 | 20.76 | 20.76 | 38.78 | 3.56 |
1583 | 1589 | 0.100325 | TCCGCTATTTGCCGCAATTG | 59.900 | 50.000 | 6.64 | 0.00 | 38.78 | 2.32 |
1584 | 1590 | 0.814457 | TTCCGCTATTTGCCGCAATT | 59.186 | 45.000 | 6.64 | 6.18 | 38.78 | 2.32 |
1585 | 1591 | 0.814457 | TTTCCGCTATTTGCCGCAAT | 59.186 | 45.000 | 6.64 | 0.23 | 38.78 | 3.56 |
1586 | 1592 | 0.814457 | ATTTCCGCTATTTGCCGCAA | 59.186 | 45.000 | 0.38 | 0.38 | 38.78 | 4.85 |
1587 | 1593 | 0.814457 | AATTTCCGCTATTTGCCGCA | 59.186 | 45.000 | 0.00 | 0.00 | 38.78 | 5.69 |
1588 | 1594 | 1.921243 | AAATTTCCGCTATTTGCCGC | 58.079 | 45.000 | 0.00 | 0.00 | 38.78 | 6.53 |
1589 | 1595 | 4.031652 | CAGAAAAATTTCCGCTATTTGCCG | 59.968 | 41.667 | 2.37 | 0.00 | 37.92 | 5.69 |
1590 | 1596 | 4.329801 | CCAGAAAAATTTCCGCTATTTGCC | 59.670 | 41.667 | 2.37 | 0.00 | 37.92 | 4.52 |
1591 | 1597 | 4.929211 | ACCAGAAAAATTTCCGCTATTTGC | 59.071 | 37.500 | 2.37 | 0.00 | 37.92 | 3.68 |
1592 | 1598 | 5.348451 | CCACCAGAAAAATTTCCGCTATTTG | 59.652 | 40.000 | 2.37 | 0.00 | 37.92 | 2.32 |
1593 | 1599 | 5.245075 | TCCACCAGAAAAATTTCCGCTATTT | 59.755 | 36.000 | 2.37 | 0.00 | 37.92 | 1.40 |
1594 | 1600 | 4.770010 | TCCACCAGAAAAATTTCCGCTATT | 59.230 | 37.500 | 2.37 | 0.00 | 37.92 | 1.73 |
1595 | 1601 | 4.340617 | TCCACCAGAAAAATTTCCGCTAT | 58.659 | 39.130 | 2.37 | 0.00 | 37.92 | 2.97 |
1596 | 1602 | 3.757270 | TCCACCAGAAAAATTTCCGCTA | 58.243 | 40.909 | 2.37 | 0.00 | 37.92 | 4.26 |
1597 | 1603 | 2.593026 | TCCACCAGAAAAATTTCCGCT | 58.407 | 42.857 | 2.37 | 0.00 | 37.92 | 5.52 |
1598 | 1604 | 3.005367 | TCTTCCACCAGAAAAATTTCCGC | 59.995 | 43.478 | 2.37 | 0.00 | 37.92 | 5.54 |
1599 | 1605 | 4.518970 | TCTCTTCCACCAGAAAAATTTCCG | 59.481 | 41.667 | 2.37 | 0.00 | 37.92 | 4.30 |
1600 | 1606 | 6.209391 | TCATCTCTTCCACCAGAAAAATTTCC | 59.791 | 38.462 | 2.37 | 0.00 | 37.92 | 3.13 |
1601 | 1607 | 7.219484 | TCATCTCTTCCACCAGAAAAATTTC | 57.781 | 36.000 | 0.00 | 0.00 | 37.45 | 2.17 |
1602 | 1608 | 7.787623 | ATCATCTCTTCCACCAGAAAAATTT | 57.212 | 32.000 | 0.00 | 0.00 | 32.88 | 1.82 |
1603 | 1609 | 7.093596 | GGAATCATCTCTTCCACCAGAAAAATT | 60.094 | 37.037 | 0.00 | 0.00 | 41.55 | 1.82 |
1604 | 1610 | 6.379417 | GGAATCATCTCTTCCACCAGAAAAAT | 59.621 | 38.462 | 0.00 | 0.00 | 41.55 | 1.82 |
1605 | 1611 | 5.711976 | GGAATCATCTCTTCCACCAGAAAAA | 59.288 | 40.000 | 0.00 | 0.00 | 41.55 | 1.94 |
1606 | 1612 | 5.014544 | AGGAATCATCTCTTCCACCAGAAAA | 59.985 | 40.000 | 5.00 | 0.00 | 43.88 | 2.29 |
1607 | 1613 | 4.537688 | AGGAATCATCTCTTCCACCAGAAA | 59.462 | 41.667 | 5.00 | 0.00 | 43.88 | 2.52 |
1608 | 1614 | 4.107072 | AGGAATCATCTCTTCCACCAGAA | 58.893 | 43.478 | 5.00 | 0.00 | 43.88 | 3.02 |
1609 | 1615 | 3.729108 | AGGAATCATCTCTTCCACCAGA | 58.271 | 45.455 | 5.00 | 0.00 | 43.88 | 3.86 |
1610 | 1616 | 4.898265 | TCTAGGAATCATCTCTTCCACCAG | 59.102 | 45.833 | 5.00 | 0.07 | 43.88 | 4.00 |
1611 | 1617 | 4.883759 | TCTAGGAATCATCTCTTCCACCA | 58.116 | 43.478 | 5.00 | 0.00 | 43.88 | 4.17 |
1612 | 1618 | 4.283212 | CCTCTAGGAATCATCTCTTCCACC | 59.717 | 50.000 | 5.00 | 0.00 | 43.88 | 4.61 |
1613 | 1619 | 4.283212 | CCCTCTAGGAATCATCTCTTCCAC | 59.717 | 50.000 | 0.00 | 0.00 | 43.88 | 4.02 |
1614 | 1620 | 4.078336 | ACCCTCTAGGAATCATCTCTTCCA | 60.078 | 45.833 | 0.00 | 0.00 | 43.88 | 3.53 |
1615 | 1621 | 4.488770 | ACCCTCTAGGAATCATCTCTTCC | 58.511 | 47.826 | 0.00 | 0.00 | 42.13 | 3.46 |
1616 | 1622 | 6.493189 | AAACCCTCTAGGAATCATCTCTTC | 57.507 | 41.667 | 0.00 | 0.00 | 39.89 | 2.87 |
1617 | 1623 | 6.657875 | CAAAACCCTCTAGGAATCATCTCTT | 58.342 | 40.000 | 0.00 | 0.00 | 39.89 | 2.85 |
1618 | 1624 | 5.397334 | GCAAAACCCTCTAGGAATCATCTCT | 60.397 | 44.000 | 0.00 | 0.00 | 39.89 | 3.10 |
1619 | 1625 | 4.819088 | GCAAAACCCTCTAGGAATCATCTC | 59.181 | 45.833 | 0.00 | 0.00 | 39.89 | 2.75 |
1620 | 1626 | 4.476479 | AGCAAAACCCTCTAGGAATCATCT | 59.524 | 41.667 | 0.00 | 0.00 | 39.89 | 2.90 |
1621 | 1627 | 4.786425 | AGCAAAACCCTCTAGGAATCATC | 58.214 | 43.478 | 0.00 | 0.00 | 39.89 | 2.92 |
1622 | 1628 | 4.870021 | AGCAAAACCCTCTAGGAATCAT | 57.130 | 40.909 | 0.00 | 0.00 | 39.89 | 2.45 |
1623 | 1629 | 5.975988 | ATAGCAAAACCCTCTAGGAATCA | 57.024 | 39.130 | 0.00 | 0.00 | 39.89 | 2.57 |
1624 | 1630 | 5.532779 | CCAATAGCAAAACCCTCTAGGAATC | 59.467 | 44.000 | 0.00 | 0.00 | 39.89 | 2.52 |
1625 | 1631 | 5.044105 | ACCAATAGCAAAACCCTCTAGGAAT | 60.044 | 40.000 | 0.00 | 0.00 | 39.89 | 3.01 |
1626 | 1632 | 4.291249 | ACCAATAGCAAAACCCTCTAGGAA | 59.709 | 41.667 | 0.00 | 0.00 | 39.89 | 3.36 |
1627 | 1633 | 3.850173 | ACCAATAGCAAAACCCTCTAGGA | 59.150 | 43.478 | 0.00 | 0.00 | 39.89 | 2.94 |
1628 | 1634 | 4.236527 | ACCAATAGCAAAACCCTCTAGG | 57.763 | 45.455 | 0.00 | 0.00 | 43.78 | 3.02 |
1629 | 1635 | 5.253330 | TCAACCAATAGCAAAACCCTCTAG | 58.747 | 41.667 | 0.00 | 0.00 | 0.00 | 2.43 |
1630 | 1636 | 5.249780 | TCAACCAATAGCAAAACCCTCTA | 57.750 | 39.130 | 0.00 | 0.00 | 0.00 | 2.43 |
1631 | 1637 | 4.082125 | CTCAACCAATAGCAAAACCCTCT | 58.918 | 43.478 | 0.00 | 0.00 | 0.00 | 3.69 |
1632 | 1638 | 3.367395 | GCTCAACCAATAGCAAAACCCTC | 60.367 | 47.826 | 0.00 | 0.00 | 38.63 | 4.30 |
1633 | 1639 | 2.562738 | GCTCAACCAATAGCAAAACCCT | 59.437 | 45.455 | 0.00 | 0.00 | 38.63 | 4.34 |
1634 | 1640 | 2.353704 | GGCTCAACCAATAGCAAAACCC | 60.354 | 50.000 | 0.00 | 0.00 | 40.61 | 4.11 |
1635 | 1641 | 2.959516 | GGCTCAACCAATAGCAAAACC | 58.040 | 47.619 | 0.00 | 0.00 | 40.61 | 3.27 |
1647 | 1653 | 5.598417 | ACAAATCCCTATAAATGGCTCAACC | 59.402 | 40.000 | 0.00 | 0.00 | 39.84 | 3.77 |
1648 | 1654 | 6.461509 | CCACAAATCCCTATAAATGGCTCAAC | 60.462 | 42.308 | 0.00 | 0.00 | 0.00 | 3.18 |
1649 | 1655 | 5.598005 | CCACAAATCCCTATAAATGGCTCAA | 59.402 | 40.000 | 0.00 | 0.00 | 0.00 | 3.02 |
1650 | 1656 | 5.103728 | TCCACAAATCCCTATAAATGGCTCA | 60.104 | 40.000 | 0.00 | 0.00 | 0.00 | 4.26 |
1651 | 1657 | 5.385198 | TCCACAAATCCCTATAAATGGCTC | 58.615 | 41.667 | 0.00 | 0.00 | 0.00 | 4.70 |
1652 | 1658 | 5.388654 | CTCCACAAATCCCTATAAATGGCT | 58.611 | 41.667 | 0.00 | 0.00 | 0.00 | 4.75 |
1653 | 1659 | 4.524328 | CCTCCACAAATCCCTATAAATGGC | 59.476 | 45.833 | 0.00 | 0.00 | 0.00 | 4.40 |
1654 | 1660 | 5.952387 | TCCTCCACAAATCCCTATAAATGG | 58.048 | 41.667 | 0.00 | 0.00 | 0.00 | 3.16 |
1655 | 1661 | 8.482852 | AAATCCTCCACAAATCCCTATAAATG | 57.517 | 34.615 | 0.00 | 0.00 | 0.00 | 2.32 |
1656 | 1662 | 7.448469 | CGAAATCCTCCACAAATCCCTATAAAT | 59.552 | 37.037 | 0.00 | 0.00 | 0.00 | 1.40 |
1657 | 1663 | 6.770785 | CGAAATCCTCCACAAATCCCTATAAA | 59.229 | 38.462 | 0.00 | 0.00 | 0.00 | 1.40 |
1658 | 1664 | 6.126594 | ACGAAATCCTCCACAAATCCCTATAA | 60.127 | 38.462 | 0.00 | 0.00 | 0.00 | 0.98 |
1659 | 1665 | 5.368523 | ACGAAATCCTCCACAAATCCCTATA | 59.631 | 40.000 | 0.00 | 0.00 | 0.00 | 1.31 |
1660 | 1666 | 4.166144 | ACGAAATCCTCCACAAATCCCTAT | 59.834 | 41.667 | 0.00 | 0.00 | 0.00 | 2.57 |
1661 | 1667 | 3.521937 | ACGAAATCCTCCACAAATCCCTA | 59.478 | 43.478 | 0.00 | 0.00 | 0.00 | 3.53 |
1662 | 1668 | 2.308866 | ACGAAATCCTCCACAAATCCCT | 59.691 | 45.455 | 0.00 | 0.00 | 0.00 | 4.20 |
1663 | 1669 | 2.423538 | CACGAAATCCTCCACAAATCCC | 59.576 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
1664 | 1670 | 3.127030 | GTCACGAAATCCTCCACAAATCC | 59.873 | 47.826 | 0.00 | 0.00 | 0.00 | 3.01 |
1665 | 1671 | 3.751175 | TGTCACGAAATCCTCCACAAATC | 59.249 | 43.478 | 0.00 | 0.00 | 0.00 | 2.17 |
1666 | 1672 | 3.750371 | TGTCACGAAATCCTCCACAAAT | 58.250 | 40.909 | 0.00 | 0.00 | 0.00 | 2.32 |
1667 | 1673 | 3.138304 | CTGTCACGAAATCCTCCACAAA | 58.862 | 45.455 | 0.00 | 0.00 | 0.00 | 2.83 |
1668 | 1674 | 2.766313 | CTGTCACGAAATCCTCCACAA | 58.234 | 47.619 | 0.00 | 0.00 | 0.00 | 3.33 |
1669 | 1675 | 1.608025 | GCTGTCACGAAATCCTCCACA | 60.608 | 52.381 | 0.00 | 0.00 | 0.00 | 4.17 |
1670 | 1676 | 1.079503 | GCTGTCACGAAATCCTCCAC | 58.920 | 55.000 | 0.00 | 0.00 | 0.00 | 4.02 |
1671 | 1677 | 0.684535 | TGCTGTCACGAAATCCTCCA | 59.315 | 50.000 | 0.00 | 0.00 | 0.00 | 3.86 |
1672 | 1678 | 1.464997 | GTTGCTGTCACGAAATCCTCC | 59.535 | 52.381 | 0.00 | 0.00 | 0.00 | 4.30 |
1673 | 1679 | 1.464997 | GGTTGCTGTCACGAAATCCTC | 59.535 | 52.381 | 0.00 | 0.00 | 0.00 | 3.71 |
1674 | 1680 | 1.202758 | TGGTTGCTGTCACGAAATCCT | 60.203 | 47.619 | 0.00 | 0.00 | 0.00 | 3.24 |
1675 | 1681 | 1.234821 | TGGTTGCTGTCACGAAATCC | 58.765 | 50.000 | 0.00 | 0.00 | 0.00 | 3.01 |
1676 | 1682 | 3.485877 | GCTATGGTTGCTGTCACGAAATC | 60.486 | 47.826 | 0.00 | 0.00 | 0.00 | 2.17 |
1677 | 1683 | 2.420022 | GCTATGGTTGCTGTCACGAAAT | 59.580 | 45.455 | 0.00 | 0.00 | 0.00 | 2.17 |
1678 | 1684 | 1.804151 | GCTATGGTTGCTGTCACGAAA | 59.196 | 47.619 | 0.00 | 0.00 | 0.00 | 3.46 |
1679 | 1685 | 1.438651 | GCTATGGTTGCTGTCACGAA | 58.561 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
1680 | 1686 | 0.735978 | CGCTATGGTTGCTGTCACGA | 60.736 | 55.000 | 0.00 | 0.00 | 0.00 | 4.35 |
1681 | 1687 | 1.014044 | ACGCTATGGTTGCTGTCACG | 61.014 | 55.000 | 0.00 | 0.00 | 0.00 | 4.35 |
1682 | 1688 | 1.927174 | CTACGCTATGGTTGCTGTCAC | 59.073 | 52.381 | 0.00 | 0.00 | 0.00 | 3.67 |
1683 | 1689 | 1.739035 | GCTACGCTATGGTTGCTGTCA | 60.739 | 52.381 | 0.00 | 0.00 | 36.07 | 3.58 |
1684 | 1690 | 0.931005 | GCTACGCTATGGTTGCTGTC | 59.069 | 55.000 | 0.00 | 0.00 | 36.07 | 3.51 |
1685 | 1691 | 0.806102 | CGCTACGCTATGGTTGCTGT | 60.806 | 55.000 | 0.00 | 0.00 | 36.68 | 4.40 |
1686 | 1692 | 1.490693 | CCGCTACGCTATGGTTGCTG | 61.491 | 60.000 | 0.00 | 0.00 | 36.68 | 4.41 |
1687 | 1693 | 1.227263 | CCGCTACGCTATGGTTGCT | 60.227 | 57.895 | 0.00 | 0.00 | 36.68 | 3.91 |
1688 | 1694 | 2.882366 | GCCGCTACGCTATGGTTGC | 61.882 | 63.158 | 0.00 | 0.00 | 35.71 | 4.17 |
1689 | 1695 | 2.585869 | CGCCGCTACGCTATGGTTG | 61.586 | 63.158 | 0.00 | 0.00 | 0.00 | 3.77 |
1690 | 1696 | 2.279252 | CGCCGCTACGCTATGGTT | 60.279 | 61.111 | 0.00 | 0.00 | 0.00 | 3.67 |
1691 | 1697 | 3.195591 | CTCGCCGCTACGCTATGGT | 62.196 | 63.158 | 0.00 | 0.00 | 0.00 | 3.55 |
1692 | 1698 | 2.429236 | CTCGCCGCTACGCTATGG | 60.429 | 66.667 | 0.00 | 0.00 | 0.00 | 2.74 |
1693 | 1699 | 2.429236 | CCTCGCCGCTACGCTATG | 60.429 | 66.667 | 0.00 | 0.00 | 0.00 | 2.23 |
1694 | 1700 | 4.344474 | GCCTCGCCGCTACGCTAT | 62.344 | 66.667 | 0.00 | 0.00 | 0.00 | 2.97 |
1698 | 1704 | 4.615834 | GAGAGCCTCGCCGCTACG | 62.616 | 72.222 | 0.00 | 0.00 | 39.87 | 3.51 |
1699 | 1705 | 4.615834 | CGAGAGCCTCGCCGCTAC | 62.616 | 72.222 | 10.89 | 0.00 | 46.75 | 3.58 |
1707 | 1713 | 0.896019 | TATAGCTGCCCGAGAGCCTC | 60.896 | 60.000 | 0.00 | 0.00 | 37.12 | 4.70 |
1708 | 1714 | 0.897863 | CTATAGCTGCCCGAGAGCCT | 60.898 | 60.000 | 0.00 | 0.00 | 37.12 | 4.58 |
1709 | 1715 | 1.589113 | CTATAGCTGCCCGAGAGCC | 59.411 | 63.158 | 0.00 | 0.00 | 37.12 | 4.70 |
1710 | 1716 | 1.080161 | GCTATAGCTGCCCGAGAGC | 60.080 | 63.158 | 17.75 | 0.00 | 38.21 | 4.09 |
1711 | 1717 | 1.211449 | CGCTATAGCTGCCCGAGAG | 59.789 | 63.158 | 21.98 | 0.00 | 39.32 | 3.20 |
1712 | 1718 | 2.920645 | GCGCTATAGCTGCCCGAGA | 61.921 | 63.158 | 21.98 | 0.00 | 39.32 | 4.04 |
1713 | 1719 | 2.431601 | GCGCTATAGCTGCCCGAG | 60.432 | 66.667 | 21.98 | 6.20 | 39.32 | 4.63 |
1714 | 1720 | 3.212906 | CTGCGCTATAGCTGCCCGA | 62.213 | 63.158 | 27.09 | 14.99 | 38.89 | 5.14 |
1715 | 1721 | 2.736236 | CTGCGCTATAGCTGCCCG | 60.736 | 66.667 | 27.09 | 18.74 | 38.89 | 6.13 |
1716 | 1722 | 1.816863 | TACCTGCGCTATAGCTGCCC | 61.817 | 60.000 | 27.09 | 13.74 | 38.89 | 5.36 |
1717 | 1723 | 0.247736 | ATACCTGCGCTATAGCTGCC | 59.752 | 55.000 | 27.09 | 15.67 | 38.89 | 4.85 |
1718 | 1724 | 1.067565 | TGATACCTGCGCTATAGCTGC | 60.068 | 52.381 | 24.99 | 24.99 | 39.63 | 5.25 |
1719 | 1725 | 2.600731 | GTGATACCTGCGCTATAGCTG | 58.399 | 52.381 | 21.98 | 15.88 | 39.32 | 4.24 |
1720 | 1726 | 1.200252 | CGTGATACCTGCGCTATAGCT | 59.800 | 52.381 | 21.98 | 5.94 | 39.32 | 3.32 |
1721 | 1727 | 1.618861 | CGTGATACCTGCGCTATAGC | 58.381 | 55.000 | 15.09 | 15.09 | 37.78 | 2.97 |
1722 | 1728 | 1.732732 | GCCGTGATACCTGCGCTATAG | 60.733 | 57.143 | 9.73 | 0.00 | 0.00 | 1.31 |
1723 | 1729 | 0.242825 | GCCGTGATACCTGCGCTATA | 59.757 | 55.000 | 9.73 | 0.00 | 0.00 | 1.31 |
1724 | 1730 | 1.006102 | GCCGTGATACCTGCGCTAT | 60.006 | 57.895 | 9.73 | 0.00 | 0.00 | 2.97 |
1725 | 1731 | 0.820482 | TAGCCGTGATACCTGCGCTA | 60.820 | 55.000 | 9.73 | 0.00 | 0.00 | 4.26 |
1726 | 1732 | 1.464376 | ATAGCCGTGATACCTGCGCT | 61.464 | 55.000 | 9.73 | 0.00 | 0.00 | 5.92 |
1727 | 1733 | 0.600255 | AATAGCCGTGATACCTGCGC | 60.600 | 55.000 | 0.00 | 0.00 | 0.00 | 6.09 |
1728 | 1734 | 1.865865 | AAATAGCCGTGATACCTGCG | 58.134 | 50.000 | 0.00 | 0.00 | 0.00 | 5.18 |
1729 | 1735 | 2.287009 | GCAAAATAGCCGTGATACCTGC | 60.287 | 50.000 | 0.00 | 0.00 | 0.00 | 4.85 |
1730 | 1736 | 2.032894 | CGCAAAATAGCCGTGATACCTG | 60.033 | 50.000 | 0.00 | 0.00 | 0.00 | 4.00 |
1731 | 1737 | 2.210116 | CGCAAAATAGCCGTGATACCT | 58.790 | 47.619 | 0.00 | 0.00 | 0.00 | 3.08 |
1732 | 1738 | 1.263217 | CCGCAAAATAGCCGTGATACC | 59.737 | 52.381 | 0.00 | 0.00 | 0.00 | 2.73 |
1733 | 1739 | 1.263217 | CCCGCAAAATAGCCGTGATAC | 59.737 | 52.381 | 0.00 | 0.00 | 0.00 | 2.24 |
1734 | 1740 | 1.588674 | CCCGCAAAATAGCCGTGATA | 58.411 | 50.000 | 0.00 | 0.00 | 0.00 | 2.15 |
1735 | 1741 | 1.724582 | GCCCGCAAAATAGCCGTGAT | 61.725 | 55.000 | 0.00 | 0.00 | 0.00 | 3.06 |
1736 | 1742 | 2.403378 | GCCCGCAAAATAGCCGTGA | 61.403 | 57.895 | 0.00 | 0.00 | 0.00 | 4.35 |
1737 | 1743 | 1.092921 | TAGCCCGCAAAATAGCCGTG | 61.093 | 55.000 | 0.00 | 0.00 | 0.00 | 4.94 |
1738 | 1744 | 0.179029 | ATAGCCCGCAAAATAGCCGT | 60.179 | 50.000 | 0.00 | 0.00 | 0.00 | 5.68 |
1739 | 1745 | 0.951558 | AATAGCCCGCAAAATAGCCG | 59.048 | 50.000 | 0.00 | 0.00 | 0.00 | 5.52 |
1740 | 1746 | 3.452755 | AAAATAGCCCGCAAAATAGCC | 57.547 | 42.857 | 0.00 | 0.00 | 0.00 | 3.93 |
1741 | 1747 | 6.447162 | AGATTAAAATAGCCCGCAAAATAGC | 58.553 | 36.000 | 0.00 | 0.00 | 0.00 | 2.97 |
1742 | 1748 | 9.559958 | CATAGATTAAAATAGCCCGCAAAATAG | 57.440 | 33.333 | 0.00 | 0.00 | 0.00 | 1.73 |
1743 | 1749 | 9.073475 | ACATAGATTAAAATAGCCCGCAAAATA | 57.927 | 29.630 | 0.00 | 0.00 | 0.00 | 1.40 |
1744 | 1750 | 7.867403 | CACATAGATTAAAATAGCCCGCAAAAT | 59.133 | 33.333 | 0.00 | 0.00 | 0.00 | 1.82 |
1745 | 1751 | 7.067615 | TCACATAGATTAAAATAGCCCGCAAAA | 59.932 | 33.333 | 0.00 | 0.00 | 0.00 | 2.44 |
1746 | 1752 | 6.544197 | TCACATAGATTAAAATAGCCCGCAAA | 59.456 | 34.615 | 0.00 | 0.00 | 0.00 | 3.68 |
1747 | 1753 | 6.058833 | TCACATAGATTAAAATAGCCCGCAA | 58.941 | 36.000 | 0.00 | 0.00 | 0.00 | 4.85 |
1748 | 1754 | 5.616270 | TCACATAGATTAAAATAGCCCGCA | 58.384 | 37.500 | 0.00 | 0.00 | 0.00 | 5.69 |
1749 | 1755 | 6.017440 | TGTTCACATAGATTAAAATAGCCCGC | 60.017 | 38.462 | 0.00 | 0.00 | 0.00 | 6.13 |
1750 | 1756 | 7.490962 | TGTTCACATAGATTAAAATAGCCCG | 57.509 | 36.000 | 0.00 | 0.00 | 0.00 | 6.13 |
1751 | 1757 | 7.013274 | TGCTGTTCACATAGATTAAAATAGCCC | 59.987 | 37.037 | 0.00 | 0.00 | 32.10 | 5.19 |
1752 | 1758 | 7.930217 | TGCTGTTCACATAGATTAAAATAGCC | 58.070 | 34.615 | 0.00 | 0.00 | 32.10 | 3.93 |
1753 | 1759 | 9.956720 | AATGCTGTTCACATAGATTAAAATAGC | 57.043 | 29.630 | 0.00 | 0.00 | 33.24 | 2.97 |
1762 | 1768 | 9.577110 | CAACATTTTAATGCTGTTCACATAGAT | 57.423 | 29.630 | 2.46 | 0.00 | 40.04 | 1.98 |
1763 | 1769 | 8.575589 | ACAACATTTTAATGCTGTTCACATAGA | 58.424 | 29.630 | 5.84 | 0.00 | 41.49 | 1.98 |
1764 | 1770 | 8.746922 | ACAACATTTTAATGCTGTTCACATAG | 57.253 | 30.769 | 5.84 | 0.00 | 41.49 | 2.23 |
1766 | 1772 | 9.357652 | GATACAACATTTTAATGCTGTTCACAT | 57.642 | 29.630 | 14.52 | 4.84 | 41.49 | 3.21 |
1767 | 1773 | 8.575589 | AGATACAACATTTTAATGCTGTTCACA | 58.424 | 29.630 | 14.52 | 0.80 | 41.49 | 3.58 |
1768 | 1774 | 8.970691 | AGATACAACATTTTAATGCTGTTCAC | 57.029 | 30.769 | 14.52 | 8.34 | 41.49 | 3.18 |
1798 | 1804 | 1.071567 | GTCGGCTTGTCGCAGTAGAC | 61.072 | 60.000 | 0.00 | 0.00 | 41.67 | 2.59 |
1800 | 1806 | 0.666274 | TTGTCGGCTTGTCGCAGTAG | 60.666 | 55.000 | 0.00 | 0.00 | 41.67 | 2.57 |
1802 | 1808 | 1.956170 | CTTGTCGGCTTGTCGCAGT | 60.956 | 57.895 | 0.00 | 0.00 | 41.67 | 4.40 |
1803 | 1809 | 1.956170 | ACTTGTCGGCTTGTCGCAG | 60.956 | 57.895 | 0.00 | 0.00 | 41.67 | 5.18 |
1804 | 1810 | 2.108157 | ACTTGTCGGCTTGTCGCA | 59.892 | 55.556 | 0.00 | 0.00 | 41.67 | 5.10 |
1805 | 1811 | 2.551270 | CACTTGTCGGCTTGTCGC | 59.449 | 61.111 | 0.00 | 0.00 | 38.13 | 5.19 |
1807 | 1813 | 0.593128 | ATTGCACTTGTCGGCTTGTC | 59.407 | 50.000 | 0.00 | 0.00 | 0.00 | 3.18 |
1810 | 1816 | 1.869342 | GCAAATTGCACTTGTCGGCTT | 60.869 | 47.619 | 13.73 | 0.00 | 44.26 | 4.35 |
1811 | 1817 | 0.318955 | GCAAATTGCACTTGTCGGCT | 60.319 | 50.000 | 13.73 | 0.00 | 44.26 | 5.52 |
1812 | 1818 | 2.144362 | GCAAATTGCACTTGTCGGC | 58.856 | 52.632 | 13.73 | 0.00 | 44.26 | 5.54 |
1822 | 1828 | 6.668323 | TGTAAGTAAGAGTCTTGCAAATTGC | 58.332 | 36.000 | 21.12 | 11.58 | 45.29 | 3.56 |
1829 | 1835 | 7.604545 | AGGAGAAAATGTAAGTAAGAGTCTTGC | 59.395 | 37.037 | 15.90 | 14.20 | 0.00 | 4.01 |
1837 | 1843 | 9.442047 | ACTCAATCAGGAGAAAATGTAAGTAAG | 57.558 | 33.333 | 0.00 | 0.00 | 38.30 | 2.34 |
1899 | 1910 | 8.970020 | TCAACCAAAGATAATACATGAAGCAAT | 58.030 | 29.630 | 0.00 | 0.00 | 0.00 | 3.56 |
1900 | 1911 | 8.243426 | GTCAACCAAAGATAATACATGAAGCAA | 58.757 | 33.333 | 0.00 | 0.00 | 0.00 | 3.91 |
1914 | 1925 | 7.153985 | CCAATTACATTGTGTCAACCAAAGAT | 58.846 | 34.615 | 0.00 | 0.00 | 38.59 | 2.40 |
1921 | 1932 | 6.362283 | GTGCTTACCAATTACATTGTGTCAAC | 59.638 | 38.462 | 0.00 | 0.00 | 38.59 | 3.18 |
1931 | 1942 | 5.772672 | ACAATGGAAGTGCTTACCAATTACA | 59.227 | 36.000 | 0.00 | 0.00 | 45.46 | 2.41 |
1932 | 1943 | 6.267496 | ACAATGGAAGTGCTTACCAATTAC | 57.733 | 37.500 | 0.00 | 0.00 | 33.50 | 1.89 |
1933 | 1944 | 6.266558 | ACAACAATGGAAGTGCTTACCAATTA | 59.733 | 34.615 | 0.00 | 0.00 | 33.50 | 1.40 |
1934 | 1945 | 5.070313 | ACAACAATGGAAGTGCTTACCAATT | 59.930 | 36.000 | 0.00 | 0.00 | 33.50 | 2.32 |
1935 | 1946 | 4.588528 | ACAACAATGGAAGTGCTTACCAAT | 59.411 | 37.500 | 0.00 | 0.00 | 33.50 | 3.16 |
1936 | 1947 | 3.957497 | ACAACAATGGAAGTGCTTACCAA | 59.043 | 39.130 | 0.00 | 0.00 | 33.50 | 3.67 |
1943 | 1954 | 5.982516 | TGTTATCAAACAACAATGGAAGTGC | 59.017 | 36.000 | 0.00 | 0.00 | 42.60 | 4.40 |
1969 | 1980 | 5.271598 | TCCATCAAGTTATGGGAAGCAAAT | 58.728 | 37.500 | 3.18 | 0.00 | 45.57 | 2.32 |
1970 | 1981 | 4.671831 | TCCATCAAGTTATGGGAAGCAAA | 58.328 | 39.130 | 3.18 | 0.00 | 45.57 | 3.68 |
1971 | 1982 | 4.314522 | TCCATCAAGTTATGGGAAGCAA | 57.685 | 40.909 | 3.18 | 0.00 | 45.57 | 3.91 |
1974 | 1985 | 8.696043 | TGATTAATCCATCAAGTTATGGGAAG | 57.304 | 34.615 | 12.90 | 0.00 | 45.57 | 3.46 |
1975 | 1986 | 8.912988 | GTTGATTAATCCATCAAGTTATGGGAA | 58.087 | 33.333 | 12.90 | 0.00 | 45.57 | 3.97 |
1976 | 1987 | 8.281531 | AGTTGATTAATCCATCAAGTTATGGGA | 58.718 | 33.333 | 12.90 | 0.00 | 41.99 | 4.37 |
1977 | 1988 | 8.355169 | CAGTTGATTAATCCATCAAGTTATGGG | 58.645 | 37.037 | 12.90 | 0.00 | 41.99 | 4.00 |
1978 | 1989 | 7.864379 | GCAGTTGATTAATCCATCAAGTTATGG | 59.136 | 37.037 | 12.90 | 0.00 | 41.99 | 2.74 |
1979 | 1990 | 8.627403 | AGCAGTTGATTAATCCATCAAGTTATG | 58.373 | 33.333 | 12.90 | 1.30 | 41.99 | 1.90 |
1980 | 1991 | 8.757982 | AGCAGTTGATTAATCCATCAAGTTAT | 57.242 | 30.769 | 12.90 | 0.00 | 41.99 | 1.89 |
1982 | 1993 | 7.395489 | AGAAGCAGTTGATTAATCCATCAAGTT | 59.605 | 33.333 | 12.90 | 0.00 | 41.99 | 2.66 |
1983 | 1994 | 6.888632 | AGAAGCAGTTGATTAATCCATCAAGT | 59.111 | 34.615 | 12.90 | 2.34 | 44.40 | 3.16 |
1995 | 2016 | 4.878397 | CCGAAATCCTAGAAGCAGTTGATT | 59.122 | 41.667 | 0.00 | 0.00 | 0.00 | 2.57 |
1997 | 2018 | 3.861840 | CCGAAATCCTAGAAGCAGTTGA | 58.138 | 45.455 | 0.00 | 0.00 | 0.00 | 3.18 |
2017 | 2038 | 4.518217 | CATCTCGATCGTTGTTATTTGCC | 58.482 | 43.478 | 15.94 | 0.00 | 0.00 | 4.52 |
2099 | 2120 | 4.144297 | CTGTCTTGTCCCTGAAAATGGAA | 58.856 | 43.478 | 0.00 | 0.00 | 31.03 | 3.53 |
2111 | 2132 | 1.548269 | AGCTCTGCTACTGTCTTGTCC | 59.452 | 52.381 | 0.00 | 0.00 | 36.99 | 4.02 |
2162 | 2183 | 1.680338 | GAGACCACCTTTGTGCAAGT | 58.320 | 50.000 | 0.00 | 0.00 | 41.35 | 3.16 |
2194 | 2215 | 3.310227 | TCGAGCGACAGAAGAAGAGATAC | 59.690 | 47.826 | 0.00 | 0.00 | 0.00 | 2.24 |
2233 | 2259 | 1.414919 | TCCCACTTGTCTAACACGCTT | 59.585 | 47.619 | 0.00 | 0.00 | 0.00 | 4.68 |
2236 | 2262 | 2.800544 | CAACTCCCACTTGTCTAACACG | 59.199 | 50.000 | 0.00 | 0.00 | 0.00 | 4.49 |
2726 | 4099 | 8.420689 | GAGTACAAGAACTCCTCACTTGAAGTG | 61.421 | 44.444 | 18.84 | 18.84 | 42.23 | 3.16 |
2728 | 4101 | 5.848406 | AGTACAAGAACTCCTCACTTGAAG | 58.152 | 41.667 | 12.04 | 0.00 | 42.12 | 3.02 |
2806 | 4179 | 8.412456 | ACAAATCACATGTCAACACATTTTCTA | 58.588 | 29.630 | 0.00 | 0.00 | 40.66 | 2.10 |
2807 | 4180 | 7.267128 | ACAAATCACATGTCAACACATTTTCT | 58.733 | 30.769 | 0.00 | 0.00 | 40.66 | 2.52 |
2808 | 4181 | 7.467557 | ACAAATCACATGTCAACACATTTTC | 57.532 | 32.000 | 0.00 | 0.00 | 40.66 | 2.29 |
2815 | 4375 | 4.886489 | TGGAGAACAAATCACATGTCAACA | 59.114 | 37.500 | 0.00 | 0.00 | 0.00 | 3.33 |
2839 | 4399 | 4.883083 | TCAGTCATTTGTTTAGACGAGCT | 58.117 | 39.130 | 0.00 | 0.00 | 37.36 | 4.09 |
2840 | 4400 | 5.446473 | CCATCAGTCATTTGTTTAGACGAGC | 60.446 | 44.000 | 0.00 | 0.00 | 37.36 | 5.03 |
2842 | 4402 | 5.637810 | GTCCATCAGTCATTTGTTTAGACGA | 59.362 | 40.000 | 0.00 | 0.00 | 37.36 | 4.20 |
2843 | 4403 | 5.639506 | AGTCCATCAGTCATTTGTTTAGACG | 59.360 | 40.000 | 0.00 | 0.00 | 37.36 | 4.18 |
2844 | 4404 | 8.607459 | CATAGTCCATCAGTCATTTGTTTAGAC | 58.393 | 37.037 | 0.00 | 0.00 | 0.00 | 2.59 |
2845 | 4405 | 7.770433 | CCATAGTCCATCAGTCATTTGTTTAGA | 59.230 | 37.037 | 0.00 | 0.00 | 0.00 | 2.10 |
2847 | 4407 | 7.629157 | TCCATAGTCCATCAGTCATTTGTTTA | 58.371 | 34.615 | 0.00 | 0.00 | 0.00 | 2.01 |
2848 | 4408 | 6.484288 | TCCATAGTCCATCAGTCATTTGTTT | 58.516 | 36.000 | 0.00 | 0.00 | 0.00 | 2.83 |
2851 | 4720 | 7.578310 | AATTCCATAGTCCATCAGTCATTTG | 57.422 | 36.000 | 0.00 | 0.00 | 0.00 | 2.32 |
2918 | 4787 | 5.523188 | TGTCATTCACAAAAGCATCAAAACC | 59.477 | 36.000 | 0.00 | 0.00 | 29.30 | 3.27 |
3509 | 5548 | 1.806623 | GCGTGCGGAGATAGGTTGATT | 60.807 | 52.381 | 0.00 | 0.00 | 0.00 | 2.57 |
3945 | 6077 | 5.452078 | CAGGCATAACTGTGAAGGAAAAA | 57.548 | 39.130 | 0.00 | 0.00 | 33.81 | 1.94 |
4118 | 6256 | 0.364180 | CATCAACAATTGCAAGCGCG | 59.636 | 50.000 | 4.94 | 0.00 | 42.97 | 6.86 |
4352 | 7938 | 6.715344 | TTACGTGGTGATTCAATTACAGTC | 57.285 | 37.500 | 0.00 | 0.00 | 0.00 | 3.51 |
4373 | 7959 | 6.882610 | AACTCAATCAGCAAGTCACATTTA | 57.117 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
4379 | 7965 | 5.645067 | CCTGATAAACTCAATCAGCAAGTCA | 59.355 | 40.000 | 7.42 | 0.00 | 45.94 | 3.41 |
4608 | 8200 | 4.589216 | TTACTAAACCGCACAGTACAGT | 57.411 | 40.909 | 0.00 | 0.00 | 0.00 | 3.55 |
4611 | 8203 | 6.366877 | TGATTCTTTACTAAACCGCACAGTAC | 59.633 | 38.462 | 0.00 | 0.00 | 0.00 | 2.73 |
4748 | 8950 | 7.814587 | AGAATAAACCTGCAAGATAAAGCAAAC | 59.185 | 33.333 | 0.00 | 0.00 | 40.73 | 2.93 |
4753 | 8955 | 9.118300 | AGATCAGAATAAACCTGCAAGATAAAG | 57.882 | 33.333 | 0.00 | 0.00 | 34.07 | 1.85 |
4817 | 9021 | 0.593128 | GTTTGTGACAATGCCTCGCT | 59.407 | 50.000 | 0.00 | 0.00 | 0.00 | 4.93 |
4920 | 9124 | 4.183686 | GCGCATGCGGCTCACAAT | 62.184 | 61.111 | 38.22 | 0.00 | 41.67 | 2.71 |
4936 | 9140 | 0.796927 | GTTCGGTTACCTCTTGCTGC | 59.203 | 55.000 | 0.00 | 0.00 | 0.00 | 5.25 |
4958 | 9162 | 1.732259 | GTGACGTGGGTAATTGCAGAG | 59.268 | 52.381 | 0.00 | 0.00 | 0.00 | 3.35 |
4994 | 9205 | 8.887717 | GTGACTAATGCTTTTAGACATCAGATT | 58.112 | 33.333 | 12.19 | 0.00 | 31.64 | 2.40 |
4995 | 9206 | 8.263640 | AGTGACTAATGCTTTTAGACATCAGAT | 58.736 | 33.333 | 12.19 | 0.00 | 31.64 | 2.90 |
4996 | 9207 | 7.615403 | AGTGACTAATGCTTTTAGACATCAGA | 58.385 | 34.615 | 12.19 | 0.00 | 31.64 | 3.27 |
4997 | 9208 | 7.840342 | AGTGACTAATGCTTTTAGACATCAG | 57.160 | 36.000 | 12.19 | 0.00 | 31.64 | 2.90 |
4999 | 9210 | 8.256611 | TGAAGTGACTAATGCTTTTAGACATC | 57.743 | 34.615 | 12.19 | 8.82 | 31.64 | 3.06 |
5002 | 9213 | 6.370166 | AGCTGAAGTGACTAATGCTTTTAGAC | 59.630 | 38.462 | 12.19 | 7.81 | 0.00 | 2.59 |
5003 | 9214 | 6.467677 | AGCTGAAGTGACTAATGCTTTTAGA | 58.532 | 36.000 | 12.19 | 0.00 | 0.00 | 2.10 |
5004 | 9215 | 6.734104 | AGCTGAAGTGACTAATGCTTTTAG | 57.266 | 37.500 | 0.00 | 5.71 | 0.00 | 1.85 |
5005 | 9216 | 7.386851 | AGTAGCTGAAGTGACTAATGCTTTTA | 58.613 | 34.615 | 10.42 | 0.00 | 0.00 | 1.52 |
5006 | 9217 | 6.234177 | AGTAGCTGAAGTGACTAATGCTTTT | 58.766 | 36.000 | 10.42 | 0.00 | 0.00 | 2.27 |
5007 | 9218 | 5.799213 | AGTAGCTGAAGTGACTAATGCTTT | 58.201 | 37.500 | 10.42 | 0.00 | 0.00 | 3.51 |
5008 | 9219 | 5.413309 | AGTAGCTGAAGTGACTAATGCTT | 57.587 | 39.130 | 10.42 | 0.00 | 0.00 | 3.91 |
5009 | 9220 | 5.413309 | AAGTAGCTGAAGTGACTAATGCT | 57.587 | 39.130 | 0.00 | 10.12 | 0.00 | 3.79 |
5010 | 9221 | 6.370166 | AGAAAAGTAGCTGAAGTGACTAATGC | 59.630 | 38.462 | 0.00 | 0.00 | 0.00 | 3.56 |
5011 | 9222 | 7.897575 | AGAAAAGTAGCTGAAGTGACTAATG | 57.102 | 36.000 | 0.00 | 0.00 | 0.00 | 1.90 |
5012 | 9223 | 8.910351 | AAAGAAAAGTAGCTGAAGTGACTAAT | 57.090 | 30.769 | 0.00 | 0.00 | 0.00 | 1.73 |
5013 | 9224 | 8.732746 | AAAAGAAAAGTAGCTGAAGTGACTAA | 57.267 | 30.769 | 0.00 | 0.00 | 0.00 | 2.24 |
5014 | 9225 | 8.732746 | AAAAAGAAAAGTAGCTGAAGTGACTA | 57.267 | 30.769 | 0.00 | 0.00 | 0.00 | 2.59 |
5015 | 9226 | 7.631717 | AAAAAGAAAAGTAGCTGAAGTGACT | 57.368 | 32.000 | 0.00 | 0.00 | 0.00 | 3.41 |
5016 | 9227 | 9.783256 | TTTAAAAAGAAAAGTAGCTGAAGTGAC | 57.217 | 29.630 | 0.00 | 0.00 | 0.00 | 3.67 |
5160 | 9420 | 6.352016 | GAGCAATACTCCATAGATTCCTGA | 57.648 | 41.667 | 0.00 | 0.00 | 39.75 | 3.86 |
5179 | 9439 | 1.333619 | GCCACACTTTTTCGAAGAGCA | 59.666 | 47.619 | 0.00 | 0.00 | 38.43 | 4.26 |
5187 | 9447 | 1.032014 | TGCAGAGGCCACACTTTTTC | 58.968 | 50.000 | 5.01 | 0.00 | 40.13 | 2.29 |
5202 | 9463 | 4.099881 | ACAATAGGGCCACAAATATTGCAG | 59.900 | 41.667 | 17.65 | 1.37 | 38.57 | 4.41 |
5228 | 9490 | 8.593492 | AAAATTAGAAGACAATGAACCAAAGC | 57.407 | 30.769 | 0.00 | 0.00 | 0.00 | 3.51 |
5238 | 9500 | 8.414629 | AGAGCAAGGAAAAATTAGAAGACAAT | 57.585 | 30.769 | 0.00 | 0.00 | 0.00 | 2.71 |
5377 | 9639 | 7.825761 | TGCGATCTAAATCCATATGAATGACAT | 59.174 | 33.333 | 3.65 | 0.00 | 42.39 | 3.06 |
5424 | 9686 | 2.892852 | CAAAAATGGAGGCCTTCACTGA | 59.107 | 45.455 | 18.57 | 0.00 | 0.00 | 3.41 |
5473 | 9735 | 4.201628 | CGGATCGAACATCAGTTTCAGAAC | 60.202 | 45.833 | 0.00 | 0.00 | 38.30 | 3.01 |
5502 | 9766 | 3.391049 | AGTTACGTTTCAACAGCCTCTC | 58.609 | 45.455 | 0.00 | 0.00 | 0.00 | 3.20 |
5575 | 9866 | 0.947244 | AAGCTTGTTGAAGAGTGCCG | 59.053 | 50.000 | 0.00 | 0.00 | 0.00 | 5.69 |
5745 | 10036 | 5.068234 | TCCTCGTTATTAAGTGTGTCCTG | 57.932 | 43.478 | 0.00 | 0.00 | 0.00 | 3.86 |
5747 | 10038 | 6.370718 | ACAATTCCTCGTTATTAAGTGTGTCC | 59.629 | 38.462 | 0.00 | 0.00 | 29.90 | 4.02 |
5784 | 10089 | 3.541632 | CAGAAATATACACCCAAGCCGT | 58.458 | 45.455 | 0.00 | 0.00 | 0.00 | 5.68 |
5785 | 10090 | 2.878406 | CCAGAAATATACACCCAAGCCG | 59.122 | 50.000 | 0.00 | 0.00 | 0.00 | 5.52 |
5789 | 10094 | 2.091555 | GGGGCCAGAAATATACACCCAA | 60.092 | 50.000 | 4.39 | 0.00 | 37.62 | 4.12 |
5952 | 10263 | 1.052617 | TCGAATGGGAACTGGACACA | 58.947 | 50.000 | 0.00 | 0.00 | 0.00 | 3.72 |
5973 | 10284 | 0.178924 | AAATCCCAACAAGGCCAGCT | 60.179 | 50.000 | 5.01 | 0.00 | 35.39 | 4.24 |
6065 | 10382 | 3.396685 | AATTTAAGCCCAGCCATGGTA | 57.603 | 42.857 | 14.67 | 0.00 | 46.10 | 3.25 |
6197 | 10523 | 7.448420 | TGAGATTAGAGAAATGCTTATCCCAG | 58.552 | 38.462 | 0.00 | 0.00 | 0.00 | 4.45 |
6204 | 10530 | 5.008415 | CCGCAATGAGATTAGAGAAATGCTT | 59.992 | 40.000 | 0.00 | 0.00 | 0.00 | 3.91 |
6286 | 10614 | 7.790782 | AAAACTGAGAGGAGAGTAGAGAATT | 57.209 | 36.000 | 0.00 | 0.00 | 0.00 | 2.17 |
6312 | 10640 | 5.200454 | CACGCCTCATCGATGAAATAAAAG | 58.800 | 41.667 | 27.09 | 14.29 | 36.18 | 2.27 |
6316 | 10644 | 3.452755 | ACACGCCTCATCGATGAAATA | 57.547 | 42.857 | 27.09 | 6.94 | 36.18 | 1.40 |
6317 | 10645 | 2.315925 | ACACGCCTCATCGATGAAAT | 57.684 | 45.000 | 27.09 | 11.28 | 36.18 | 2.17 |
6318 | 10646 | 1.999735 | GAACACGCCTCATCGATGAAA | 59.000 | 47.619 | 27.09 | 8.05 | 36.18 | 2.69 |
6321 | 10649 | 1.154205 | GGGAACACGCCTCATCGATG | 61.154 | 60.000 | 19.61 | 19.61 | 0.00 | 3.84 |
6322 | 10650 | 1.144057 | GGGAACACGCCTCATCGAT | 59.856 | 57.895 | 0.00 | 0.00 | 0.00 | 3.59 |
6323 | 10651 | 1.541310 | AAGGGAACACGCCTCATCGA | 61.541 | 55.000 | 0.00 | 0.00 | 0.00 | 3.59 |
6324 | 10652 | 1.079127 | AAGGGAACACGCCTCATCG | 60.079 | 57.895 | 0.00 | 0.00 | 0.00 | 3.84 |
6332 | 10660 | 0.671796 | GGGTTTTGGAAGGGAACACG | 59.328 | 55.000 | 0.00 | 0.00 | 0.00 | 4.49 |
6397 | 10779 | 1.202290 | GCACGGAAATTTCGGATGCAT | 60.202 | 47.619 | 27.87 | 0.00 | 36.09 | 3.96 |
6404 | 10786 | 5.188194 | CGAAATAGTAGCACGGAAATTTCG | 58.812 | 41.667 | 11.95 | 11.93 | 44.91 | 3.46 |
6409 | 10791 | 2.962125 | TGCGAAATAGTAGCACGGAAA | 58.038 | 42.857 | 0.00 | 0.00 | 35.81 | 3.13 |
6432 | 10982 | 7.119846 | ACTCTGGTTGCAGTTATATCACTTTTC | 59.880 | 37.037 | 0.00 | 0.00 | 0.00 | 2.29 |
6437 | 10989 | 5.292101 | GTCACTCTGGTTGCAGTTATATCAC | 59.708 | 44.000 | 0.00 | 0.00 | 0.00 | 3.06 |
6448 | 11000 | 1.242076 | AAGCATGTCACTCTGGTTGC | 58.758 | 50.000 | 0.00 | 0.00 | 32.27 | 4.17 |
6476 | 11031 | 7.484007 | CAGATATGTTGACTCAAAGTTTGCATC | 59.516 | 37.037 | 10.90 | 10.62 | 0.00 | 3.91 |
6504 | 11079 | 9.826574 | GAAAAGAAAACAAAAGGGGTAAAGTAT | 57.173 | 29.630 | 0.00 | 0.00 | 0.00 | 2.12 |
6572 | 12224 | 0.839946 | AGATACCACCATGACAGCCC | 59.160 | 55.000 | 0.00 | 0.00 | 0.00 | 5.19 |
6682 | 12334 | 4.225942 | ACAATCCAGTGGATCTAAGAAGCA | 59.774 | 41.667 | 25.01 | 0.00 | 42.27 | 3.91 |
6713 | 12365 | 1.549243 | TTCCGGTCCATGTGCTGCTA | 61.549 | 55.000 | 0.00 | 0.00 | 0.00 | 3.49 |
6731 | 12383 | 3.259876 | TGAACCGGCAGTAGTCTGTTATT | 59.740 | 43.478 | 0.00 | 0.00 | 43.05 | 1.40 |
6841 | 12493 | 3.183574 | CGACGATGAAAGCACTTGTTACA | 59.816 | 43.478 | 0.00 | 0.00 | 0.00 | 2.41 |
6860 | 12512 | 7.588854 | GGTTTTATCCTTGTTACTTTTCACGAC | 59.411 | 37.037 | 0.00 | 0.00 | 0.00 | 4.34 |
6916 | 12568 | 5.244626 | AGGCTCATTTATTATGGATTGTGGC | 59.755 | 40.000 | 0.00 | 0.00 | 0.00 | 5.01 |
6962 | 12811 | 9.574516 | AGAAGACAAGGTAGTCACAAAATAAAT | 57.425 | 29.630 | 0.00 | 0.00 | 40.98 | 1.40 |
6966 | 12815 | 5.239525 | GCAGAAGACAAGGTAGTCACAAAAT | 59.760 | 40.000 | 0.00 | 0.00 | 40.98 | 1.82 |
6989 | 12838 | 5.819825 | AAGATTTTGGTTCCTAATCTCGC | 57.180 | 39.130 | 14.86 | 0.00 | 37.58 | 5.03 |
7000 | 12849 | 9.974980 | ACATTAATGTCGTTAAAGATTTTGGTT | 57.025 | 25.926 | 15.47 | 0.00 | 35.87 | 3.67 |
7030 | 12879 | 3.694566 | ACCGAATGAAGGGTTAATCAAGC | 59.305 | 43.478 | 0.00 | 0.00 | 30.73 | 4.01 |
7040 | 12889 | 3.821033 | AGAAAGTTGAACCGAATGAAGGG | 59.179 | 43.478 | 0.00 | 0.00 | 0.00 | 3.95 |
7042 | 12891 | 5.821204 | ACAAGAAAGTTGAACCGAATGAAG | 58.179 | 37.500 | 0.00 | 0.00 | 0.00 | 3.02 |
7043 | 12892 | 5.828299 | ACAAGAAAGTTGAACCGAATGAA | 57.172 | 34.783 | 0.00 | 0.00 | 0.00 | 2.57 |
7045 | 12894 | 6.885735 | AAAACAAGAAAGTTGAACCGAATG | 57.114 | 33.333 | 0.00 | 0.00 | 0.00 | 2.67 |
7046 | 12895 | 7.093992 | TGAAAAACAAGAAAGTTGAACCGAAT | 58.906 | 30.769 | 0.00 | 0.00 | 0.00 | 3.34 |
7047 | 12896 | 6.448006 | TGAAAAACAAGAAAGTTGAACCGAA | 58.552 | 32.000 | 0.00 | 0.00 | 0.00 | 4.30 |
7049 | 12898 | 6.885735 | ATGAAAAACAAGAAAGTTGAACCG | 57.114 | 33.333 | 0.00 | 0.00 | 0.00 | 4.44 |
7069 | 12918 | 7.719193 | TGGTGAAAAGTCAGAATCTAACAATGA | 59.281 | 33.333 | 0.00 | 0.00 | 33.27 | 2.57 |
7070 | 12919 | 7.805071 | GTGGTGAAAAGTCAGAATCTAACAATG | 59.195 | 37.037 | 0.00 | 0.00 | 33.27 | 2.82 |
7071 | 12920 | 7.721399 | AGTGGTGAAAAGTCAGAATCTAACAAT | 59.279 | 33.333 | 0.00 | 0.00 | 33.27 | 2.71 |
7156 | 13005 | 9.837525 | GTATCCAAGTATCTACGGTAAAGTATG | 57.162 | 37.037 | 0.00 | 0.00 | 0.00 | 2.39 |
7393 | 13242 | 6.070538 | ACACCTAGTAGCAGAAATCAAGACAT | 60.071 | 38.462 | 0.00 | 0.00 | 0.00 | 3.06 |
7396 | 13245 | 5.105310 | GGACACCTAGTAGCAGAAATCAAGA | 60.105 | 44.000 | 0.00 | 0.00 | 0.00 | 3.02 |
7432 | 13281 | 4.774726 | TCCTCTCAAGTGATAGCTTGTCTT | 59.225 | 41.667 | 0.00 | 0.00 | 44.41 | 3.01 |
7459 | 13308 | 2.362397 | TCTGATTCTTCCGAAGCGCTAT | 59.638 | 45.455 | 12.05 | 0.00 | 38.35 | 2.97 |
7460 | 13309 | 1.749063 | TCTGATTCTTCCGAAGCGCTA | 59.251 | 47.619 | 12.05 | 0.00 | 38.35 | 4.26 |
7499 | 13350 | 4.751060 | CCCTAGCGTTACAACATACAGAA | 58.249 | 43.478 | 0.00 | 0.00 | 0.00 | 3.02 |
7585 | 13438 | 3.681593 | TCGGTAATTTTTGCTGCCTACT | 58.318 | 40.909 | 0.00 | 0.00 | 0.00 | 2.57 |
7654 | 13507 | 5.188555 | TCTGTTGATGGCTCTTACTCATCTT | 59.811 | 40.000 | 0.00 | 0.00 | 38.38 | 2.40 |
7768 | 13621 | 6.705863 | TTAGGAACGGAAGGAGTAGATTAC | 57.294 | 41.667 | 0.00 | 0.00 | 0.00 | 1.89 |
7773 | 13626 | 6.712179 | AGTATTTAGGAACGGAAGGAGTAG | 57.288 | 41.667 | 0.00 | 0.00 | 0.00 | 2.57 |
7776 | 13629 | 5.731591 | ACAAGTATTTAGGAACGGAAGGAG | 58.268 | 41.667 | 0.00 | 0.00 | 0.00 | 3.69 |
7777 | 13630 | 5.482878 | AGACAAGTATTTAGGAACGGAAGGA | 59.517 | 40.000 | 0.00 | 0.00 | 0.00 | 3.36 |
7778 | 13631 | 5.731591 | AGACAAGTATTTAGGAACGGAAGG | 58.268 | 41.667 | 0.00 | 0.00 | 0.00 | 3.46 |
7779 | 13632 | 7.603024 | AGAAAGACAAGTATTTAGGAACGGAAG | 59.397 | 37.037 | 0.00 | 0.00 | 0.00 | 3.46 |
7780 | 13633 | 7.447594 | AGAAAGACAAGTATTTAGGAACGGAA | 58.552 | 34.615 | 0.00 | 0.00 | 0.00 | 4.30 |
7781 | 13634 | 7.001099 | AGAAAGACAAGTATTTAGGAACGGA | 57.999 | 36.000 | 0.00 | 0.00 | 0.00 | 4.69 |
7782 | 13635 | 8.248945 | TCTAGAAAGACAAGTATTTAGGAACGG | 58.751 | 37.037 | 0.00 | 0.00 | 0.00 | 4.44 |
7783 | 13636 | 9.291664 | CTCTAGAAAGACAAGTATTTAGGAACG | 57.708 | 37.037 | 0.00 | 0.00 | 0.00 | 3.95 |
7806 | 13659 | 9.355215 | CGTATGTAGTCACTTGTTAAAATCTCT | 57.645 | 33.333 | 0.00 | 0.00 | 0.00 | 3.10 |
7807 | 13660 | 8.592998 | CCGTATGTAGTCACTTGTTAAAATCTC | 58.407 | 37.037 | 0.00 | 0.00 | 0.00 | 2.75 |
7808 | 13661 | 7.064253 | GCCGTATGTAGTCACTTGTTAAAATCT | 59.936 | 37.037 | 0.00 | 0.00 | 0.00 | 2.40 |
7809 | 13662 | 7.178074 | GCCGTATGTAGTCACTTGTTAAAATC | 58.822 | 38.462 | 0.00 | 0.00 | 0.00 | 2.17 |
7810 | 13663 | 6.183360 | CGCCGTATGTAGTCACTTGTTAAAAT | 60.183 | 38.462 | 0.00 | 0.00 | 0.00 | 1.82 |
7811 | 13664 | 5.118971 | CGCCGTATGTAGTCACTTGTTAAAA | 59.881 | 40.000 | 0.00 | 0.00 | 0.00 | 1.52 |
7812 | 13665 | 4.622313 | CGCCGTATGTAGTCACTTGTTAAA | 59.378 | 41.667 | 0.00 | 0.00 | 0.00 | 1.52 |
7813 | 13666 | 4.168014 | CGCCGTATGTAGTCACTTGTTAA | 58.832 | 43.478 | 0.00 | 0.00 | 0.00 | 2.01 |
7814 | 13667 | 3.761657 | CGCCGTATGTAGTCACTTGTTA | 58.238 | 45.455 | 0.00 | 0.00 | 0.00 | 2.41 |
7815 | 13668 | 2.602878 | CGCCGTATGTAGTCACTTGTT | 58.397 | 47.619 | 0.00 | 0.00 | 0.00 | 2.83 |
7816 | 13669 | 1.734707 | GCGCCGTATGTAGTCACTTGT | 60.735 | 52.381 | 0.00 | 0.00 | 0.00 | 3.16 |
7817 | 13670 | 0.921347 | GCGCCGTATGTAGTCACTTG | 59.079 | 55.000 | 0.00 | 0.00 | 0.00 | 3.16 |
7818 | 13671 | 0.528924 | TGCGCCGTATGTAGTCACTT | 59.471 | 50.000 | 4.18 | 0.00 | 0.00 | 3.16 |
7819 | 13672 | 0.528924 | TTGCGCCGTATGTAGTCACT | 59.471 | 50.000 | 4.18 | 0.00 | 0.00 | 3.41 |
7820 | 13673 | 1.352114 | TTTGCGCCGTATGTAGTCAC | 58.648 | 50.000 | 4.18 | 0.00 | 0.00 | 3.67 |
7821 | 13674 | 2.081725 | TTTTGCGCCGTATGTAGTCA | 57.918 | 45.000 | 4.18 | 0.00 | 0.00 | 3.41 |
7822 | 13675 | 2.605818 | TCATTTTGCGCCGTATGTAGTC | 59.394 | 45.455 | 4.18 | 0.00 | 0.00 | 2.59 |
7823 | 13676 | 2.607635 | CTCATTTTGCGCCGTATGTAGT | 59.392 | 45.455 | 4.18 | 0.00 | 0.00 | 2.73 |
7824 | 13677 | 2.607635 | ACTCATTTTGCGCCGTATGTAG | 59.392 | 45.455 | 4.18 | 7.56 | 0.00 | 2.74 |
7825 | 13678 | 2.623535 | ACTCATTTTGCGCCGTATGTA | 58.376 | 42.857 | 4.18 | 0.00 | 0.00 | 2.29 |
7826 | 13679 | 1.448985 | ACTCATTTTGCGCCGTATGT | 58.551 | 45.000 | 4.18 | 0.00 | 0.00 | 2.29 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.