Multiple sequence alignment - TraesCS4A01G394000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G394000 chr4A 100.000 2414 0 0 1 2414 669438810 669441223 0.000000e+00 4458.0
1 TraesCS4A01G394000 chr4A 92.688 506 34 2 936 1439 629954131 629954635 0.000000e+00 726.0
2 TraesCS4A01G394000 chr4A 92.688 506 34 2 936 1439 629963089 629963593 0.000000e+00 726.0
3 TraesCS4A01G394000 chr4A 85.526 304 42 2 1803 2105 545770365 545770667 1.390000e-82 316.0
4 TraesCS4A01G394000 chr4A 83.601 311 48 2 1803 2110 656783206 656783516 3.040000e-74 289.0
5 TraesCS4A01G394000 chr6D 95.635 504 22 0 938 1441 12542735 12542232 0.000000e+00 809.0
6 TraesCS4A01G394000 chr2A 94.643 504 27 0 938 1441 374735692 374736195 0.000000e+00 782.0
7 TraesCS4A01G394000 chr5D 95.085 468 23 0 974 1441 488175155 488175622 0.000000e+00 737.0
8 TraesCS4A01G394000 chr5D 92.717 508 33 2 936 1443 377316486 377315983 0.000000e+00 730.0
9 TraesCS4A01G394000 chrUn 92.688 506 34 2 936 1439 276676303 276675799 0.000000e+00 726.0
10 TraesCS4A01G394000 chrUn 93.111 450 31 0 992 1441 111229970 111229521 0.000000e+00 660.0
11 TraesCS4A01G394000 chrUn 83.923 311 47 2 1803 2110 231458973 231458663 6.530000e-76 294.0
12 TraesCS4A01G394000 chrUn 83.601 311 48 2 1803 2110 275536210 275535900 3.040000e-74 289.0
13 TraesCS4A01G394000 chr7A 95.918 441 18 0 1696 2136 21185658 21186098 0.000000e+00 715.0
14 TraesCS4A01G394000 chr7A 91.702 470 39 0 1 470 21184510 21184979 0.000000e+00 652.0
15 TraesCS4A01G394000 chr7A 93.727 271 13 4 1441 1710 21185208 21185475 1.040000e-108 403.0
16 TraesCS4A01G394000 chr7A 91.220 205 13 4 2212 2414 21186367 21186568 8.500000e-70 274.0
17 TraesCS4A01G394000 chr7A 91.176 102 9 0 2004 2105 47455277 47455378 3.240000e-29 139.0
18 TraesCS4A01G394000 chr7A 93.976 83 5 0 856 938 21185141 21185223 2.520000e-25 126.0
19 TraesCS4A01G394000 chr4D 89.286 504 30 14 938 1441 497530959 497530480 5.710000e-171 610.0
20 TraesCS4A01G394000 chr3B 98.824 170 2 0 691 860 461200407 461200576 1.080000e-78 303.0
21 TraesCS4A01G394000 chr3B 96.067 178 5 2 694 870 156649804 156649980 3.040000e-74 289.0
22 TraesCS4A01G394000 chr3B 92.500 200 11 4 694 893 178399251 178399056 1.410000e-72 283.0
23 TraesCS4A01G394000 chr3B 77.027 296 68 0 1801 2096 463097657 463097362 1.150000e-38 171.0
24 TraesCS4A01G394000 chr3B 98.837 86 1 0 1357 1442 174246562 174246647 1.160000e-33 154.0
25 TraesCS4A01G394000 chr1B 97.688 173 4 0 687 859 67053878 67054050 5.050000e-77 298.0
26 TraesCS4A01G394000 chr1B 97.368 38 1 0 2063 2100 548189126 548189089 5.570000e-07 65.8
27 TraesCS4A01G394000 chr1A 98.214 168 3 0 694 861 526575522 526575689 6.530000e-76 294.0
28 TraesCS4A01G394000 chr3A 97.661 171 3 1 690 860 715754640 715754471 2.350000e-75 292.0
29 TraesCS4A01G394000 chr3A 77.365 296 67 0 1801 2096 477564914 477564619 2.470000e-40 176.0
30 TraesCS4A01G394000 chr3A 95.082 61 3 0 1802 1862 710089731 710089791 1.980000e-16 97.1
31 TraesCS4A01G394000 chr2B 97.619 168 4 0 692 859 207716323 207716156 3.040000e-74 289.0
32 TraesCS4A01G394000 chr2B 97.015 134 4 0 1245 1378 190056424 190056557 2.410000e-55 226.0
33 TraesCS4A01G394000 chr5B 94.652 187 7 3 692 876 314576235 314576050 1.090000e-73 287.0
34 TraesCS4A01G394000 chr5B 94.652 187 7 2 691 875 664946535 664946350 1.090000e-73 287.0
35 TraesCS4A01G394000 chr7D 83.117 308 45 5 1808 2110 45231556 45231861 8.500000e-70 274.0
36 TraesCS4A01G394000 chr1D 97.368 38 1 0 2063 2100 407668176 407668139 5.570000e-07 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G394000 chr4A 669438810 669441223 2413 False 4458 4458 100.0000 1 2414 1 chr4A.!!$F5 2413
1 TraesCS4A01G394000 chr4A 629954131 629954635 504 False 726 726 92.6880 936 1439 1 chr4A.!!$F2 503
2 TraesCS4A01G394000 chr4A 629963089 629963593 504 False 726 726 92.6880 936 1439 1 chr4A.!!$F3 503
3 TraesCS4A01G394000 chr6D 12542232 12542735 503 True 809 809 95.6350 938 1441 1 chr6D.!!$R1 503
4 TraesCS4A01G394000 chr2A 374735692 374736195 503 False 782 782 94.6430 938 1441 1 chr2A.!!$F1 503
5 TraesCS4A01G394000 chr5D 377315983 377316486 503 True 730 730 92.7170 936 1443 1 chr5D.!!$R1 507
6 TraesCS4A01G394000 chrUn 276675799 276676303 504 True 726 726 92.6880 936 1439 1 chrUn.!!$R4 503
7 TraesCS4A01G394000 chr7A 21184510 21186568 2058 False 434 715 93.3086 1 2414 5 chr7A.!!$F2 2413

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
148 149 0.523072 CTTGGGCACATTCTTGGTCG 59.477 55.0 0.0 0.0 0.0 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1704 1936 0.037512 CAATTTGGCGCCACAATCCA 60.038 50.0 32.95 11.21 0.0 3.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 1.412343 TGCTTTGAACTTGCTTTCCCC 59.588 47.619 0.00 0.00 0.00 4.81
41 42 1.269723 GAACTTGCTTTCCCCTTTCCG 59.730 52.381 0.00 0.00 0.00 4.30
77 78 5.904941 TCTTGTTGGACTAACTGTTTCGTA 58.095 37.500 0.00 0.00 40.05 3.43
96 97 7.837202 TTCGTATTTTCGTCATTCAGGTAAT 57.163 32.000 0.00 0.00 0.00 1.89
97 98 7.229228 TCGTATTTTCGTCATTCAGGTAATG 57.771 36.000 0.00 0.00 45.47 1.90
127 128 1.123077 ATGCCCGATGCTCTTGTCTA 58.877 50.000 0.00 0.00 42.00 2.59
148 149 0.523072 CTTGGGCACATTCTTGGTCG 59.477 55.000 0.00 0.00 0.00 4.79
222 223 1.227438 AAGGACCGTCACCACAACG 60.227 57.895 0.00 0.00 39.78 4.10
223 224 1.678598 AAGGACCGTCACCACAACGA 61.679 55.000 0.00 0.00 42.62 3.85
238 239 3.645975 CGACACAACCACCCGTGC 61.646 66.667 0.00 0.00 36.57 5.34
241 242 3.591835 CACAACCACCCGTGCACC 61.592 66.667 12.15 0.00 0.00 5.01
242 243 4.116585 ACAACCACCCGTGCACCA 62.117 61.111 12.15 0.00 0.00 4.17
267 268 2.807967 TGTTGCAGTCTTCTCCAAATCG 59.192 45.455 0.00 0.00 0.00 3.34
309 310 2.031012 CTTCTCCACGGTGCTGCA 59.969 61.111 0.00 0.00 0.00 4.41
310 311 1.376424 CTTCTCCACGGTGCTGCAT 60.376 57.895 5.27 0.00 0.00 3.96
311 312 0.957395 CTTCTCCACGGTGCTGCATT 60.957 55.000 5.27 0.00 0.00 3.56
315 316 2.429571 CACGGTGCTGCATTGTGC 60.430 61.111 19.43 2.00 45.29 4.57
321 322 2.177531 GCTGCATTGTGCTCGGTG 59.822 61.111 3.41 0.00 45.31 4.94
335 336 0.690192 TCGGTGAAAGGATGAGGCAA 59.310 50.000 0.00 0.00 0.00 4.52
357 358 0.893727 GTTGGTCAACCCGGAAGCAT 60.894 55.000 0.73 0.00 35.36 3.79
361 362 1.375396 TCAACCCGGAAGCATGACG 60.375 57.895 0.73 0.00 0.00 4.35
366 367 2.100631 CCGGAAGCATGACGTGGAC 61.101 63.158 0.00 0.00 0.00 4.02
370 371 2.501223 GAAGCATGACGTGGACGGGA 62.501 60.000 0.00 0.00 44.95 5.14
374 375 1.608336 ATGACGTGGACGGGAGGAA 60.608 57.895 0.00 0.00 44.95 3.36
383 384 1.963464 GACGGGAGGAAATGCGGGTA 61.963 60.000 0.00 0.00 0.00 3.69
396 397 2.017559 GCGGGTAGTCCATCGAGCTT 62.018 60.000 0.00 0.00 34.36 3.74
402 403 3.251487 GGTAGTCCATCGAGCTTCTACTC 59.749 52.174 15.13 0.00 0.00 2.59
414 415 4.749976 AGCTTCTACTCCTAAAAAGAGCG 58.250 43.478 0.00 0.00 34.56 5.03
470 471 5.428457 TGTGGGACCATCAATATTGACTAGT 59.572 40.000 20.19 16.46 40.49 2.57
471 472 5.992217 GTGGGACCATCAATATTGACTAGTC 59.008 44.000 20.19 22.31 40.49 2.59
472 473 5.665360 TGGGACCATCAATATTGACTAGTCA 59.335 40.000 28.13 21.74 40.49 3.41
483 484 4.400529 TTGACTAGTCAACTGAGTTGCA 57.599 40.909 30.07 8.21 43.90 4.08
484 485 4.400529 TGACTAGTCAACTGAGTTGCAA 57.599 40.909 23.24 1.34 42.55 4.08
485 486 4.119862 TGACTAGTCAACTGAGTTGCAAC 58.880 43.478 23.24 22.17 42.55 4.17
486 487 4.119862 GACTAGTCAACTGAGTTGCAACA 58.880 43.478 30.11 10.86 42.55 3.33
487 488 4.708177 ACTAGTCAACTGAGTTGCAACAT 58.292 39.130 30.11 15.81 42.55 2.71
488 489 4.752101 ACTAGTCAACTGAGTTGCAACATC 59.248 41.667 30.11 22.65 42.55 3.06
489 490 3.544684 AGTCAACTGAGTTGCAACATCA 58.455 40.909 30.11 25.37 42.55 3.07
490 491 3.313526 AGTCAACTGAGTTGCAACATCAC 59.686 43.478 30.11 17.90 42.55 3.06
491 492 3.065233 GTCAACTGAGTTGCAACATCACA 59.935 43.478 30.11 20.93 42.55 3.58
492 493 3.693578 TCAACTGAGTTGCAACATCACAA 59.306 39.130 30.11 8.19 42.55 3.33
493 494 4.157472 TCAACTGAGTTGCAACATCACAAA 59.843 37.500 30.11 8.95 42.55 2.83
494 495 4.717233 ACTGAGTTGCAACATCACAAAA 57.283 36.364 30.11 8.56 0.00 2.44
495 496 5.070770 ACTGAGTTGCAACATCACAAAAA 57.929 34.783 30.11 7.97 0.00 1.94
510 511 1.139947 AAAAACCACGTTGCCACCG 59.860 52.632 0.00 0.00 0.00 4.94
511 512 1.596895 AAAAACCACGTTGCCACCGT 61.597 50.000 0.00 0.00 39.52 4.83
512 513 1.995646 AAAACCACGTTGCCACCGTC 61.996 55.000 0.00 0.00 36.17 4.79
513 514 4.922026 ACCACGTTGCCACCGTCC 62.922 66.667 0.00 0.00 36.17 4.79
515 516 4.953868 CACGTTGCCACCGTCCGA 62.954 66.667 0.00 0.00 36.17 4.55
516 517 4.657824 ACGTTGCCACCGTCCGAG 62.658 66.667 0.00 0.00 31.97 4.63
537 538 2.512692 GGGGGTAATTTAACCGGTGT 57.487 50.000 8.52 0.36 40.73 4.16
538 539 2.806434 GGGGGTAATTTAACCGGTGTT 58.194 47.619 8.52 3.79 40.73 3.32
539 540 3.961849 GGGGGTAATTTAACCGGTGTTA 58.038 45.455 8.52 2.71 40.73 2.41
540 541 4.339748 GGGGGTAATTTAACCGGTGTTAA 58.660 43.478 8.52 0.00 43.43 2.01
541 542 4.955450 GGGGGTAATTTAACCGGTGTTAAT 59.045 41.667 8.52 5.50 44.24 1.40
542 543 6.125719 GGGGGTAATTTAACCGGTGTTAATA 58.874 40.000 8.52 0.00 44.24 0.98
543 544 6.262944 GGGGGTAATTTAACCGGTGTTAATAG 59.737 42.308 8.52 0.00 44.24 1.73
544 545 6.828273 GGGGTAATTTAACCGGTGTTAATAGT 59.172 38.462 8.52 0.00 44.24 2.12
545 546 7.339212 GGGGTAATTTAACCGGTGTTAATAGTT 59.661 37.037 8.52 2.89 44.24 2.24
546 547 8.739039 GGGTAATTTAACCGGTGTTAATAGTTT 58.261 33.333 8.52 0.00 44.24 2.66
547 548 9.558648 GGTAATTTAACCGGTGTTAATAGTTTG 57.441 33.333 8.52 0.00 44.24 2.93
550 551 7.437793 TTTAACCGGTGTTAATAGTTTGAGG 57.562 36.000 8.52 0.00 44.24 3.86
551 552 3.946606 ACCGGTGTTAATAGTTTGAGGG 58.053 45.455 6.12 0.00 0.00 4.30
552 553 3.328637 ACCGGTGTTAATAGTTTGAGGGT 59.671 43.478 6.12 0.00 0.00 4.34
553 554 3.687698 CCGGTGTTAATAGTTTGAGGGTG 59.312 47.826 0.00 0.00 0.00 4.61
554 555 4.320870 CGGTGTTAATAGTTTGAGGGTGT 58.679 43.478 0.00 0.00 0.00 4.16
555 556 5.481105 CGGTGTTAATAGTTTGAGGGTGTA 58.519 41.667 0.00 0.00 0.00 2.90
556 557 5.579511 CGGTGTTAATAGTTTGAGGGTGTAG 59.420 44.000 0.00 0.00 0.00 2.74
557 558 6.470278 GGTGTTAATAGTTTGAGGGTGTAGT 58.530 40.000 0.00 0.00 0.00 2.73
558 559 6.938596 GGTGTTAATAGTTTGAGGGTGTAGTT 59.061 38.462 0.00 0.00 0.00 2.24
559 560 7.446319 GGTGTTAATAGTTTGAGGGTGTAGTTT 59.554 37.037 0.00 0.00 0.00 2.66
560 561 9.492973 GTGTTAATAGTTTGAGGGTGTAGTTTA 57.507 33.333 0.00 0.00 0.00 2.01
609 610 5.362430 AGATGAAACTAGCCCTAGAGTTCAG 59.638 44.000 20.13 0.00 40.42 3.02
632 633 6.599244 CAGGGTTGAAAATATGCACTTCTCTA 59.401 38.462 0.00 0.00 0.00 2.43
635 636 6.312918 GGTTGAAAATATGCACTTCTCTACGA 59.687 38.462 0.00 0.00 0.00 3.43
644 645 7.932120 ATGCACTTCTCTACGACATATTAAC 57.068 36.000 0.00 0.00 0.00 2.01
645 646 6.859017 TGCACTTCTCTACGACATATTAACA 58.141 36.000 0.00 0.00 0.00 2.41
647 648 6.973474 GCACTTCTCTACGACATATTAACACT 59.027 38.462 0.00 0.00 0.00 3.55
648 649 8.127327 GCACTTCTCTACGACATATTAACACTA 58.873 37.037 0.00 0.00 0.00 2.74
653 679 8.209584 TCTCTACGACATATTAACACTAGGAGT 58.790 37.037 0.00 0.00 0.00 3.85
666 692 3.777522 CACTAGGAGTTGAGGGGAGATTT 59.222 47.826 0.00 0.00 0.00 2.17
667 693 4.226168 CACTAGGAGTTGAGGGGAGATTTT 59.774 45.833 0.00 0.00 0.00 1.82
698 724 9.968743 CTTAATTCTGACGTTGTTTTATACTCC 57.031 33.333 0.00 0.00 0.00 3.85
699 725 7.972832 AATTCTGACGTTGTTTTATACTCCA 57.027 32.000 0.00 0.00 0.00 3.86
700 726 8.561738 AATTCTGACGTTGTTTTATACTCCAT 57.438 30.769 0.00 0.00 0.00 3.41
701 727 7.591006 TTCTGACGTTGTTTTATACTCCATC 57.409 36.000 0.00 0.00 0.00 3.51
702 728 6.103997 TCTGACGTTGTTTTATACTCCATCC 58.896 40.000 0.00 0.00 0.00 3.51
703 729 4.865925 TGACGTTGTTTTATACTCCATCCG 59.134 41.667 0.00 0.00 0.00 4.18
704 730 4.824289 ACGTTGTTTTATACTCCATCCGT 58.176 39.130 0.00 0.00 0.00 4.69
705 731 5.240121 ACGTTGTTTTATACTCCATCCGTT 58.760 37.500 0.00 0.00 0.00 4.44
706 732 5.349543 ACGTTGTTTTATACTCCATCCGTTC 59.650 40.000 0.00 0.00 0.00 3.95
707 733 5.220529 CGTTGTTTTATACTCCATCCGTTCC 60.221 44.000 0.00 0.00 0.00 3.62
708 734 4.773013 TGTTTTATACTCCATCCGTTCCC 58.227 43.478 0.00 0.00 0.00 3.97
709 735 4.225492 TGTTTTATACTCCATCCGTTCCCA 59.775 41.667 0.00 0.00 0.00 4.37
710 736 5.187687 GTTTTATACTCCATCCGTTCCCAA 58.812 41.667 0.00 0.00 0.00 4.12
711 737 5.438698 TTTATACTCCATCCGTTCCCAAA 57.561 39.130 0.00 0.00 0.00 3.28
712 738 5.640158 TTATACTCCATCCGTTCCCAAAT 57.360 39.130 0.00 0.00 0.00 2.32
713 739 6.750660 TTATACTCCATCCGTTCCCAAATA 57.249 37.500 0.00 0.00 0.00 1.40
714 740 3.277142 ACTCCATCCGTTCCCAAATAC 57.723 47.619 0.00 0.00 0.00 1.89
715 741 2.844348 ACTCCATCCGTTCCCAAATACT 59.156 45.455 0.00 0.00 0.00 2.12
716 742 3.265995 ACTCCATCCGTTCCCAAATACTT 59.734 43.478 0.00 0.00 0.00 2.24
717 743 3.616219 TCCATCCGTTCCCAAATACTTG 58.384 45.455 0.00 0.00 0.00 3.16
718 744 3.009695 TCCATCCGTTCCCAAATACTTGT 59.990 43.478 0.00 0.00 0.00 3.16
719 745 3.377172 CCATCCGTTCCCAAATACTTGTC 59.623 47.826 0.00 0.00 0.00 3.18
720 746 4.261801 CATCCGTTCCCAAATACTTGTCT 58.738 43.478 0.00 0.00 0.00 3.41
721 747 4.360951 TCCGTTCCCAAATACTTGTCTT 57.639 40.909 0.00 0.00 0.00 3.01
722 748 4.721132 TCCGTTCCCAAATACTTGTCTTT 58.279 39.130 0.00 0.00 0.00 2.52
723 749 4.758165 TCCGTTCCCAAATACTTGTCTTTC 59.242 41.667 0.00 0.00 0.00 2.62
724 750 4.760204 CCGTTCCCAAATACTTGTCTTTCT 59.240 41.667 0.00 0.00 0.00 2.52
725 751 5.935789 CCGTTCCCAAATACTTGTCTTTCTA 59.064 40.000 0.00 0.00 0.00 2.10
726 752 6.092259 CCGTTCCCAAATACTTGTCTTTCTAG 59.908 42.308 0.00 0.00 0.00 2.43
727 753 6.092259 CGTTCCCAAATACTTGTCTTTCTAGG 59.908 42.308 0.00 0.00 0.00 3.02
728 754 5.497474 TCCCAAATACTTGTCTTTCTAGGC 58.503 41.667 0.00 0.00 0.00 3.93
729 755 5.013704 TCCCAAATACTTGTCTTTCTAGGCA 59.986 40.000 0.00 0.00 33.22 4.75
730 756 5.888161 CCCAAATACTTGTCTTTCTAGGCAT 59.112 40.000 0.00 0.00 35.56 4.40
731 757 6.378280 CCCAAATACTTGTCTTTCTAGGCATT 59.622 38.462 0.00 0.00 35.56 3.56
732 758 7.093771 CCCAAATACTTGTCTTTCTAGGCATTT 60.094 37.037 0.00 0.00 35.56 2.32
733 759 7.970614 CCAAATACTTGTCTTTCTAGGCATTTC 59.029 37.037 0.00 0.00 35.56 2.17
734 760 8.514594 CAAATACTTGTCTTTCTAGGCATTTCA 58.485 33.333 0.00 0.00 35.56 2.69
735 761 8.635765 AATACTTGTCTTTCTAGGCATTTCAA 57.364 30.769 0.00 0.00 35.56 2.69
736 762 6.959639 ACTTGTCTTTCTAGGCATTTCAAA 57.040 33.333 0.00 0.00 35.56 2.69
737 763 7.530426 ACTTGTCTTTCTAGGCATTTCAAAT 57.470 32.000 0.00 0.00 35.56 2.32
738 764 7.373493 ACTTGTCTTTCTAGGCATTTCAAATG 58.627 34.615 5.68 5.68 35.56 2.32
739 765 6.271488 TGTCTTTCTAGGCATTTCAAATGG 57.729 37.500 12.14 0.00 29.10 3.16
740 766 6.009589 TGTCTTTCTAGGCATTTCAAATGGA 58.990 36.000 12.14 0.00 29.10 3.41
741 767 6.071952 TGTCTTTCTAGGCATTTCAAATGGAC 60.072 38.462 12.14 8.23 29.10 4.02
742 768 6.151817 GTCTTTCTAGGCATTTCAAATGGACT 59.848 38.462 12.14 3.08 0.00 3.85
743 769 6.375455 TCTTTCTAGGCATTTCAAATGGACTC 59.625 38.462 12.14 0.00 0.00 3.36
744 770 5.178096 TCTAGGCATTTCAAATGGACTCA 57.822 39.130 12.14 0.00 0.00 3.41
745 771 5.569355 TCTAGGCATTTCAAATGGACTCAA 58.431 37.500 12.14 0.00 0.00 3.02
746 772 4.525912 AGGCATTTCAAATGGACTCAAC 57.474 40.909 12.14 0.00 0.00 3.18
747 773 3.896888 AGGCATTTCAAATGGACTCAACA 59.103 39.130 12.14 0.00 0.00 3.33
748 774 4.529377 AGGCATTTCAAATGGACTCAACAT 59.471 37.500 12.14 0.00 0.00 2.71
749 775 5.716228 AGGCATTTCAAATGGACTCAACATA 59.284 36.000 12.14 0.00 0.00 2.29
750 776 5.807011 GGCATTTCAAATGGACTCAACATAC 59.193 40.000 12.14 0.00 0.00 2.39
751 777 5.512788 GCATTTCAAATGGACTCAACATACG 59.487 40.000 12.14 0.00 0.00 3.06
752 778 5.621197 TTTCAAATGGACTCAACATACGG 57.379 39.130 0.00 0.00 0.00 4.02
753 779 4.545208 TCAAATGGACTCAACATACGGA 57.455 40.909 0.00 0.00 0.00 4.69
754 780 5.097742 TCAAATGGACTCAACATACGGAT 57.902 39.130 0.00 0.00 0.00 4.18
755 781 4.875536 TCAAATGGACTCAACATACGGATG 59.124 41.667 5.94 5.94 39.16 3.51
757 783 5.607939 AATGGACTCAACATACGGATGTA 57.392 39.130 15.10 0.00 45.93 2.29
758 784 5.808366 ATGGACTCAACATACGGATGTAT 57.192 39.130 15.10 0.00 45.93 2.29
795 821 9.677567 TTTAAAGTGTAGATTCACTCATTTTGC 57.322 29.630 0.00 0.00 46.25 3.68
796 822 5.536554 AGTGTAGATTCACTCATTTTGCG 57.463 39.130 0.00 0.00 44.07 4.85
797 823 4.091424 GTGTAGATTCACTCATTTTGCGC 58.909 43.478 0.00 0.00 35.68 6.09
798 824 2.927553 AGATTCACTCATTTTGCGCC 57.072 45.000 4.18 0.00 0.00 6.53
799 825 1.131126 AGATTCACTCATTTTGCGCCG 59.869 47.619 4.18 0.00 0.00 6.46
800 826 0.881118 ATTCACTCATTTTGCGCCGT 59.119 45.000 4.18 0.00 0.00 5.68
801 827 1.514003 TTCACTCATTTTGCGCCGTA 58.486 45.000 4.18 0.00 0.00 4.02
802 828 1.732941 TCACTCATTTTGCGCCGTAT 58.267 45.000 4.18 0.00 0.00 3.06
803 829 1.396648 TCACTCATTTTGCGCCGTATG 59.603 47.619 4.18 5.63 0.00 2.39
804 830 1.130373 CACTCATTTTGCGCCGTATGT 59.870 47.619 4.18 0.00 0.00 2.29
805 831 2.350192 CACTCATTTTGCGCCGTATGTA 59.650 45.455 4.18 0.00 0.00 2.29
806 832 2.607635 ACTCATTTTGCGCCGTATGTAG 59.392 45.455 4.18 7.56 0.00 2.74
807 833 2.607635 CTCATTTTGCGCCGTATGTAGT 59.392 45.455 4.18 0.00 0.00 2.73
808 834 2.605818 TCATTTTGCGCCGTATGTAGTC 59.394 45.455 4.18 0.00 0.00 2.59
809 835 2.081725 TTTTGCGCCGTATGTAGTCA 57.918 45.000 4.18 0.00 0.00 3.41
810 836 1.352114 TTTGCGCCGTATGTAGTCAC 58.648 50.000 4.18 0.00 0.00 3.67
811 837 0.528924 TTGCGCCGTATGTAGTCACT 59.471 50.000 4.18 0.00 0.00 3.41
812 838 0.528924 TGCGCCGTATGTAGTCACTT 59.471 50.000 4.18 0.00 0.00 3.16
813 839 0.921347 GCGCCGTATGTAGTCACTTG 59.079 55.000 0.00 0.00 0.00 3.16
814 840 1.734707 GCGCCGTATGTAGTCACTTGT 60.735 52.381 0.00 0.00 0.00 3.16
815 841 2.602878 CGCCGTATGTAGTCACTTGTT 58.397 47.619 0.00 0.00 0.00 2.83
816 842 3.761657 CGCCGTATGTAGTCACTTGTTA 58.238 45.455 0.00 0.00 0.00 2.41
817 843 4.168014 CGCCGTATGTAGTCACTTGTTAA 58.832 43.478 0.00 0.00 0.00 2.01
818 844 4.622313 CGCCGTATGTAGTCACTTGTTAAA 59.378 41.667 0.00 0.00 0.00 1.52
819 845 5.118971 CGCCGTATGTAGTCACTTGTTAAAA 59.881 40.000 0.00 0.00 0.00 1.52
820 846 6.183360 CGCCGTATGTAGTCACTTGTTAAAAT 60.183 38.462 0.00 0.00 0.00 1.82
821 847 7.178074 GCCGTATGTAGTCACTTGTTAAAATC 58.822 38.462 0.00 0.00 0.00 2.17
822 848 7.064253 GCCGTATGTAGTCACTTGTTAAAATCT 59.936 37.037 0.00 0.00 0.00 2.40
823 849 8.592998 CCGTATGTAGTCACTTGTTAAAATCTC 58.407 37.037 0.00 0.00 0.00 2.75
824 850 9.355215 CGTATGTAGTCACTTGTTAAAATCTCT 57.645 33.333 0.00 0.00 0.00 3.10
847 873 9.291664 CTCTAGAAAGACAAGTATTTAGGAACG 57.708 37.037 0.00 0.00 0.00 3.95
848 874 8.248945 TCTAGAAAGACAAGTATTTAGGAACGG 58.751 37.037 0.00 0.00 0.00 4.44
849 875 7.001099 AGAAAGACAAGTATTTAGGAACGGA 57.999 36.000 0.00 0.00 0.00 4.69
850 876 7.447594 AGAAAGACAAGTATTTAGGAACGGAA 58.552 34.615 0.00 0.00 0.00 4.30
851 877 7.603024 AGAAAGACAAGTATTTAGGAACGGAAG 59.397 37.037 0.00 0.00 0.00 3.46
852 878 5.731591 AGACAAGTATTTAGGAACGGAAGG 58.268 41.667 0.00 0.00 0.00 3.46
853 879 5.482878 AGACAAGTATTTAGGAACGGAAGGA 59.517 40.000 0.00 0.00 0.00 3.36
854 880 5.731591 ACAAGTATTTAGGAACGGAAGGAG 58.268 41.667 0.00 0.00 0.00 3.69
857 883 6.712179 AGTATTTAGGAACGGAAGGAGTAG 57.288 41.667 0.00 0.00 0.00 2.57
862 888 6.705863 TTAGGAACGGAAGGAGTAGATTAC 57.294 41.667 0.00 0.00 0.00 1.89
1045 1071 3.681593 TCGGTAATTTTTGCTGCCTACT 58.318 40.909 0.00 0.00 0.00 2.57
1131 1159 4.751060 CCCTAGCGTTACAACATACAGAA 58.249 43.478 0.00 0.00 0.00 3.02
1198 1226 4.774726 TCCTCTCAAGTGATAGCTTGTCTT 59.225 41.667 0.00 0.00 44.41 3.01
1234 1262 5.105310 GGACACCTAGTAGCAGAAATCAAGA 60.105 44.000 0.00 0.00 0.00 3.02
1237 1265 6.070538 ACACCTAGTAGCAGAAATCAAGACAT 60.071 38.462 0.00 0.00 0.00 3.06
1464 1696 9.751542 AAAAATGAGAGTATCCAAGTATCTACG 57.248 33.333 0.00 0.00 33.66 3.51
1465 1697 7.455641 AATGAGAGTATCCAAGTATCTACGG 57.544 40.000 0.00 0.00 33.66 4.02
1466 1698 5.938279 TGAGAGTATCCAAGTATCTACGGT 58.062 41.667 0.00 0.00 33.66 4.83
1467 1699 7.071069 TGAGAGTATCCAAGTATCTACGGTA 57.929 40.000 0.00 0.00 33.66 4.02
1468 1700 7.512130 TGAGAGTATCCAAGTATCTACGGTAA 58.488 38.462 0.00 0.00 33.66 2.85
1469 1701 7.994911 TGAGAGTATCCAAGTATCTACGGTAAA 59.005 37.037 0.00 0.00 33.66 2.01
1470 1702 8.393671 AGAGTATCCAAGTATCTACGGTAAAG 57.606 38.462 0.00 0.00 33.66 1.85
1471 1703 7.997803 AGAGTATCCAAGTATCTACGGTAAAGT 59.002 37.037 0.00 0.00 33.66 2.66
1472 1704 9.277783 GAGTATCCAAGTATCTACGGTAAAGTA 57.722 37.037 0.00 0.00 0.00 2.24
1473 1705 9.804977 AGTATCCAAGTATCTACGGTAAAGTAT 57.195 33.333 0.00 0.00 0.00 2.12
1474 1706 9.837525 GTATCCAAGTATCTACGGTAAAGTATG 57.162 37.037 0.00 0.00 0.00 2.39
1475 1707 6.742109 TCCAAGTATCTACGGTAAAGTATGC 58.258 40.000 0.00 0.00 0.00 3.14
1476 1708 6.321945 TCCAAGTATCTACGGTAAAGTATGCA 59.678 38.462 0.00 0.00 0.00 3.96
1477 1709 6.641314 CCAAGTATCTACGGTAAAGTATGCAG 59.359 42.308 0.00 0.00 0.00 4.41
1478 1710 6.328641 AGTATCTACGGTAAAGTATGCAGG 57.671 41.667 0.00 0.00 0.00 4.85
1479 1711 6.066690 AGTATCTACGGTAAAGTATGCAGGA 58.933 40.000 0.00 0.00 0.00 3.86
1480 1712 5.864418 ATCTACGGTAAAGTATGCAGGAA 57.136 39.130 0.00 0.00 0.00 3.36
1481 1713 5.664294 TCTACGGTAAAGTATGCAGGAAA 57.336 39.130 0.00 0.00 0.00 3.13
1482 1714 6.040209 TCTACGGTAAAGTATGCAGGAAAA 57.960 37.500 0.00 0.00 0.00 2.29
1483 1715 6.465948 TCTACGGTAAAGTATGCAGGAAAAA 58.534 36.000 0.00 0.00 0.00 1.94
1484 1716 7.107542 TCTACGGTAAAGTATGCAGGAAAAAT 58.892 34.615 0.00 0.00 0.00 1.82
1485 1717 5.949735 ACGGTAAAGTATGCAGGAAAAATG 58.050 37.500 0.00 0.00 0.00 2.32
1486 1718 4.798387 CGGTAAAGTATGCAGGAAAAATGC 59.202 41.667 0.00 0.00 44.11 3.56
1487 1719 5.393027 CGGTAAAGTATGCAGGAAAAATGCT 60.393 40.000 0.00 0.00 44.17 3.79
1488 1720 6.398095 GGTAAAGTATGCAGGAAAAATGCTT 58.602 36.000 0.00 0.00 44.17 3.91
1489 1721 7.543756 GGTAAAGTATGCAGGAAAAATGCTTA 58.456 34.615 0.00 0.00 44.17 3.09
1490 1722 8.032451 GGTAAAGTATGCAGGAAAAATGCTTAA 58.968 33.333 0.00 0.00 44.17 1.85
1491 1723 9.418045 GTAAAGTATGCAGGAAAAATGCTTAAA 57.582 29.630 0.00 0.00 44.17 1.52
1499 1731 9.762933 TGCAGGAAAAATGCTTAAATATATTCC 57.237 29.630 0.00 0.00 44.17 3.01
1500 1732 9.762933 GCAGGAAAAATGCTTAAATATATTCCA 57.237 29.630 0.00 0.00 40.59 3.53
1509 1741 8.330466 TGCTTAAATATATTCCACCATTACCG 57.670 34.615 0.00 0.00 0.00 4.02
1510 1742 7.940137 TGCTTAAATATATTCCACCATTACCGT 59.060 33.333 0.00 0.00 0.00 4.83
1511 1743 9.439500 GCTTAAATATATTCCACCATTACCGTA 57.561 33.333 0.00 0.00 0.00 4.02
1515 1747 7.743116 ATATATTCCACCATTACCGTATCCA 57.257 36.000 0.00 0.00 0.00 3.41
1516 1748 3.547054 TTCCACCATTACCGTATCCAC 57.453 47.619 0.00 0.00 0.00 4.02
1517 1749 2.468915 TCCACCATTACCGTATCCACA 58.531 47.619 0.00 0.00 0.00 4.17
1518 1750 2.838813 TCCACCATTACCGTATCCACAA 59.161 45.455 0.00 0.00 0.00 3.33
1519 1751 3.456644 TCCACCATTACCGTATCCACAAT 59.543 43.478 0.00 0.00 0.00 2.71
1520 1752 4.654724 TCCACCATTACCGTATCCACAATA 59.345 41.667 0.00 0.00 0.00 1.90
1521 1753 4.994852 CCACCATTACCGTATCCACAATAG 59.005 45.833 0.00 0.00 0.00 1.73
1522 1754 5.221561 CCACCATTACCGTATCCACAATAGA 60.222 44.000 0.00 0.00 0.00 1.98
1523 1755 6.285224 CACCATTACCGTATCCACAATAGAA 58.715 40.000 0.00 0.00 0.00 2.10
1524 1756 6.764085 CACCATTACCGTATCCACAATAGAAA 59.236 38.462 0.00 0.00 0.00 2.52
1525 1757 7.444183 CACCATTACCGTATCCACAATAGAAAT 59.556 37.037 0.00 0.00 0.00 2.17
1526 1758 7.996644 ACCATTACCGTATCCACAATAGAAATT 59.003 33.333 0.00 0.00 0.00 1.82
1527 1759 8.289618 CCATTACCGTATCCACAATAGAAATTG 58.710 37.037 0.00 0.00 46.66 2.32
1528 1760 5.751243 ACCGTATCCACAATAGAAATTGC 57.249 39.130 0.00 0.00 45.41 3.56
1529 1761 5.189928 ACCGTATCCACAATAGAAATTGCA 58.810 37.500 0.00 0.00 45.41 4.08
1530 1762 5.296780 ACCGTATCCACAATAGAAATTGCAG 59.703 40.000 0.00 0.00 45.41 4.41
1531 1763 5.207768 CGTATCCACAATAGAAATTGCAGC 58.792 41.667 0.00 0.00 45.41 5.25
1532 1764 5.220835 CGTATCCACAATAGAAATTGCAGCA 60.221 40.000 0.00 0.00 45.41 4.41
1533 1765 5.664294 ATCCACAATAGAAATTGCAGCAA 57.336 34.783 11.07 11.07 45.41 3.91
1534 1766 5.063180 TCCACAATAGAAATTGCAGCAAG 57.937 39.130 14.47 0.00 45.41 4.01
1535 1767 4.523943 TCCACAATAGAAATTGCAGCAAGT 59.476 37.500 14.47 8.35 45.41 3.16
1536 1768 4.624024 CCACAATAGAAATTGCAGCAAGTG 59.376 41.667 14.47 12.52 45.41 3.16
1537 1769 4.624024 CACAATAGAAATTGCAGCAAGTGG 59.376 41.667 14.47 0.76 45.41 4.00
1538 1770 4.281688 ACAATAGAAATTGCAGCAAGTGGT 59.718 37.500 14.47 4.66 45.41 4.16
1539 1771 2.806608 AGAAATTGCAGCAAGTGGTG 57.193 45.000 14.47 6.13 45.58 4.17
1540 1772 2.309613 AGAAATTGCAGCAAGTGGTGA 58.690 42.857 14.47 0.00 45.66 4.02
1541 1773 2.694628 AGAAATTGCAGCAAGTGGTGAA 59.305 40.909 14.47 0.27 45.66 3.18
1542 1774 3.132646 AGAAATTGCAGCAAGTGGTGAAA 59.867 39.130 14.47 10.39 44.29 2.69
1543 1775 3.540314 AATTGCAGCAAGTGGTGAAAA 57.460 38.095 14.47 7.87 43.50 2.29
1544 1776 2.582728 TTGCAGCAAGTGGTGAAAAG 57.417 45.000 14.41 0.00 45.66 2.27
1545 1777 1.473258 TGCAGCAAGTGGTGAAAAGT 58.527 45.000 14.41 0.00 45.66 2.66
1546 1778 1.405105 TGCAGCAAGTGGTGAAAAGTC 59.595 47.619 14.41 0.00 45.66 3.01
1547 1779 1.405105 GCAGCAAGTGGTGAAAAGTCA 59.595 47.619 14.41 0.00 45.66 3.41
1548 1780 2.542411 GCAGCAAGTGGTGAAAAGTCAG 60.542 50.000 14.41 0.00 45.66 3.51
1549 1781 2.945008 CAGCAAGTGGTGAAAAGTCAGA 59.055 45.455 4.47 0.00 45.66 3.27
1550 1782 3.378112 CAGCAAGTGGTGAAAAGTCAGAA 59.622 43.478 4.47 0.00 45.66 3.02
1551 1783 4.037208 CAGCAAGTGGTGAAAAGTCAGAAT 59.963 41.667 4.47 0.00 45.66 2.40
1552 1784 4.276926 AGCAAGTGGTGAAAAGTCAGAATC 59.723 41.667 0.00 0.00 33.27 2.52
1553 1785 4.276926 GCAAGTGGTGAAAAGTCAGAATCT 59.723 41.667 0.00 0.00 33.27 2.40
1554 1786 5.470098 GCAAGTGGTGAAAAGTCAGAATCTA 59.530 40.000 0.00 0.00 33.27 1.98
1555 1787 6.017109 GCAAGTGGTGAAAAGTCAGAATCTAA 60.017 38.462 0.00 0.00 33.27 2.10
1556 1788 7.355778 CAAGTGGTGAAAAGTCAGAATCTAAC 58.644 38.462 0.00 0.00 33.27 2.34
1557 1789 6.591935 AGTGGTGAAAAGTCAGAATCTAACA 58.408 36.000 0.00 0.00 33.27 2.41
1558 1790 7.054124 AGTGGTGAAAAGTCAGAATCTAACAA 58.946 34.615 0.00 0.00 33.27 2.83
1559 1791 7.721399 AGTGGTGAAAAGTCAGAATCTAACAAT 59.279 33.333 0.00 0.00 33.27 2.71
1560 1792 7.805071 GTGGTGAAAAGTCAGAATCTAACAATG 59.195 37.037 0.00 0.00 33.27 2.82
1561 1793 7.719193 TGGTGAAAAGTCAGAATCTAACAATGA 59.281 33.333 0.00 0.00 33.27 2.57
1562 1794 8.567948 GGTGAAAAGTCAGAATCTAACAATGAA 58.432 33.333 0.00 0.00 33.27 2.57
1563 1795 9.950680 GTGAAAAGTCAGAATCTAACAATGAAA 57.049 29.630 0.00 0.00 33.27 2.69
1569 1801 9.956720 AGTCAGAATCTAACAATGAAAAACAAG 57.043 29.630 0.00 0.00 0.00 3.16
1570 1802 9.950680 GTCAGAATCTAACAATGAAAAACAAGA 57.049 29.630 0.00 0.00 0.00 3.02
1580 1812 8.028540 ACAATGAAAAACAAGAAAGTTGAACC 57.971 30.769 0.00 0.00 0.00 3.62
1581 1813 6.885735 ATGAAAAACAAGAAAGTTGAACCG 57.114 33.333 0.00 0.00 0.00 4.44
1582 1814 6.015027 TGAAAAACAAGAAAGTTGAACCGA 57.985 33.333 0.00 0.00 0.00 4.69
1583 1815 6.448006 TGAAAAACAAGAAAGTTGAACCGAA 58.552 32.000 0.00 0.00 0.00 4.30
1584 1816 7.093992 TGAAAAACAAGAAAGTTGAACCGAAT 58.906 30.769 0.00 0.00 0.00 3.34
1585 1817 6.885735 AAAACAAGAAAGTTGAACCGAATG 57.114 33.333 0.00 0.00 0.00 2.67
1586 1818 5.828299 AACAAGAAAGTTGAACCGAATGA 57.172 34.783 0.00 0.00 0.00 2.57
1587 1819 5.828299 ACAAGAAAGTTGAACCGAATGAA 57.172 34.783 0.00 0.00 0.00 2.57
1588 1820 5.821204 ACAAGAAAGTTGAACCGAATGAAG 58.179 37.500 0.00 0.00 0.00 3.02
1589 1821 5.215160 CAAGAAAGTTGAACCGAATGAAGG 58.785 41.667 0.00 0.00 0.00 3.46
1590 1822 3.821033 AGAAAGTTGAACCGAATGAAGGG 59.179 43.478 0.00 0.00 0.00 3.95
1591 1823 2.951229 AGTTGAACCGAATGAAGGGT 57.049 45.000 0.00 0.00 38.44 4.34
1593 1825 4.360951 AGTTGAACCGAATGAAGGGTTA 57.639 40.909 0.00 0.00 46.16 2.85
1594 1826 4.721132 AGTTGAACCGAATGAAGGGTTAA 58.279 39.130 0.00 0.00 46.16 2.01
1595 1827 5.321927 AGTTGAACCGAATGAAGGGTTAAT 58.678 37.500 0.00 0.00 46.16 1.40
1596 1828 5.414765 AGTTGAACCGAATGAAGGGTTAATC 59.585 40.000 0.00 0.00 46.16 1.75
1597 1829 4.912586 TGAACCGAATGAAGGGTTAATCA 58.087 39.130 0.00 0.00 46.16 2.57
1598 1830 5.317808 TGAACCGAATGAAGGGTTAATCAA 58.682 37.500 0.00 0.00 46.16 2.57
1599 1831 5.414454 TGAACCGAATGAAGGGTTAATCAAG 59.586 40.000 0.00 0.00 46.16 3.02
1600 1832 3.694566 ACCGAATGAAGGGTTAATCAAGC 59.305 43.478 0.00 0.00 30.73 4.01
1613 1845 6.630071 GGTTAATCAAGCCACACATTAATGT 58.370 36.000 15.47 15.47 42.84 2.71
1614 1846 6.751888 GGTTAATCAAGCCACACATTAATGTC 59.248 38.462 18.25 7.45 39.39 3.06
1615 1847 4.621068 ATCAAGCCACACATTAATGTCG 57.379 40.909 18.25 15.24 39.39 4.35
1616 1848 3.407698 TCAAGCCACACATTAATGTCGT 58.592 40.909 18.25 15.83 39.39 4.34
1617 1849 3.818210 TCAAGCCACACATTAATGTCGTT 59.182 39.130 18.25 4.50 39.39 3.85
1618 1850 4.998033 TCAAGCCACACATTAATGTCGTTA 59.002 37.500 18.25 0.00 39.39 3.18
1619 1851 5.470437 TCAAGCCACACATTAATGTCGTTAA 59.530 36.000 18.25 0.00 39.39 2.01
1620 1852 5.950758 AGCCACACATTAATGTCGTTAAA 57.049 34.783 18.25 0.00 39.39 1.52
1621 1853 5.938322 AGCCACACATTAATGTCGTTAAAG 58.062 37.500 18.25 8.05 39.39 1.85
1622 1854 5.703592 AGCCACACATTAATGTCGTTAAAGA 59.296 36.000 18.25 0.00 39.39 2.52
1623 1855 6.374333 AGCCACACATTAATGTCGTTAAAGAT 59.626 34.615 18.25 5.54 39.39 2.40
1624 1856 7.027161 GCCACACATTAATGTCGTTAAAGATT 58.973 34.615 18.25 0.00 39.39 2.40
1625 1857 7.540745 GCCACACATTAATGTCGTTAAAGATTT 59.459 33.333 18.25 0.00 39.39 2.17
1626 1858 9.405587 CCACACATTAATGTCGTTAAAGATTTT 57.594 29.630 18.25 0.00 39.39 1.82
1628 1860 9.405587 ACACATTAATGTCGTTAAAGATTTTGG 57.594 29.630 18.25 4.28 39.39 3.28
1629 1861 9.405587 CACATTAATGTCGTTAAAGATTTTGGT 57.594 29.630 18.25 0.00 39.39 3.67
1630 1862 9.974980 ACATTAATGTCGTTAAAGATTTTGGTT 57.025 25.926 15.47 0.00 35.87 3.67
1632 1864 9.634163 ATTAATGTCGTTAAAGATTTTGGTTCC 57.366 29.630 1.41 0.00 35.98 3.62
1633 1865 6.894339 ATGTCGTTAAAGATTTTGGTTCCT 57.106 33.333 0.00 0.00 0.00 3.36
1634 1866 7.989416 ATGTCGTTAAAGATTTTGGTTCCTA 57.011 32.000 0.00 0.00 0.00 2.94
1635 1867 7.804843 TGTCGTTAAAGATTTTGGTTCCTAA 57.195 32.000 0.00 0.00 0.00 2.69
1636 1868 8.398878 TGTCGTTAAAGATTTTGGTTCCTAAT 57.601 30.769 0.00 0.00 0.00 1.73
1637 1869 8.508875 TGTCGTTAAAGATTTTGGTTCCTAATC 58.491 33.333 0.00 8.25 0.00 1.75
1638 1870 8.727910 GTCGTTAAAGATTTTGGTTCCTAATCT 58.272 33.333 11.22 11.22 39.60 2.40
1639 1871 8.943002 TCGTTAAAGATTTTGGTTCCTAATCTC 58.057 33.333 14.86 4.99 37.58 2.75
1640 1872 7.903431 CGTTAAAGATTTTGGTTCCTAATCTCG 59.097 37.037 14.86 11.85 37.58 4.04
1641 1873 5.819825 AAGATTTTGGTTCCTAATCTCGC 57.180 39.130 14.86 0.00 37.58 5.03
1642 1874 4.843728 AGATTTTGGTTCCTAATCTCGCA 58.156 39.130 11.22 0.00 34.41 5.10
1643 1875 4.878397 AGATTTTGGTTCCTAATCTCGCAG 59.122 41.667 11.22 0.00 34.41 5.18
1644 1876 3.973206 TTTGGTTCCTAATCTCGCAGA 57.027 42.857 0.00 0.00 0.00 4.26
1645 1877 3.973206 TTGGTTCCTAATCTCGCAGAA 57.027 42.857 0.00 0.00 34.09 3.02
1646 1878 3.526931 TGGTTCCTAATCTCGCAGAAG 57.473 47.619 0.00 0.00 34.09 2.85
1647 1879 3.096852 TGGTTCCTAATCTCGCAGAAGA 58.903 45.455 0.00 0.00 34.09 2.87
1648 1880 3.119101 TGGTTCCTAATCTCGCAGAAGAC 60.119 47.826 0.00 0.00 34.09 3.01
1649 1881 3.119101 GGTTCCTAATCTCGCAGAAGACA 60.119 47.826 0.00 0.00 34.09 3.41
1650 1882 4.495422 GTTCCTAATCTCGCAGAAGACAA 58.505 43.478 0.00 0.00 34.09 3.18
1651 1883 4.377839 TCCTAATCTCGCAGAAGACAAG 57.622 45.455 0.00 0.00 34.09 3.16
1652 1884 3.131223 TCCTAATCTCGCAGAAGACAAGG 59.869 47.826 0.00 0.00 34.09 3.61
1653 1885 3.118956 CCTAATCTCGCAGAAGACAAGGT 60.119 47.826 0.00 0.00 34.09 3.50
1654 1886 4.098044 CCTAATCTCGCAGAAGACAAGGTA 59.902 45.833 0.00 0.00 34.09 3.08
1655 1887 3.791973 ATCTCGCAGAAGACAAGGTAG 57.208 47.619 0.00 0.00 34.09 3.18
1656 1888 2.515854 TCTCGCAGAAGACAAGGTAGT 58.484 47.619 0.00 0.00 34.09 2.73
1657 1889 2.488545 TCTCGCAGAAGACAAGGTAGTC 59.511 50.000 0.00 0.00 38.81 2.59
1658 1890 2.229062 CTCGCAGAAGACAAGGTAGTCA 59.771 50.000 0.00 0.00 40.98 3.41
1659 1891 2.030185 TCGCAGAAGACAAGGTAGTCAC 60.030 50.000 0.00 0.00 40.98 3.67
1660 1892 2.288213 CGCAGAAGACAAGGTAGTCACA 60.288 50.000 0.00 0.00 40.98 3.58
1661 1893 3.728845 GCAGAAGACAAGGTAGTCACAA 58.271 45.455 0.00 0.00 40.98 3.33
1662 1894 4.127171 GCAGAAGACAAGGTAGTCACAAA 58.873 43.478 0.00 0.00 40.98 2.83
1663 1895 4.574828 GCAGAAGACAAGGTAGTCACAAAA 59.425 41.667 0.00 0.00 40.98 2.44
1664 1896 5.239525 GCAGAAGACAAGGTAGTCACAAAAT 59.760 40.000 0.00 0.00 40.98 1.82
1665 1897 6.426937 GCAGAAGACAAGGTAGTCACAAAATA 59.573 38.462 0.00 0.00 40.98 1.40
1666 1898 7.041372 GCAGAAGACAAGGTAGTCACAAAATAA 60.041 37.037 0.00 0.00 40.98 1.40
1667 1899 8.836413 CAGAAGACAAGGTAGTCACAAAATAAA 58.164 33.333 0.00 0.00 40.98 1.40
1668 1900 9.574516 AGAAGACAAGGTAGTCACAAAATAAAT 57.425 29.630 0.00 0.00 40.98 1.40
1696 1928 7.628234 AGAAGATTTCTCTCATAAAAGGCTCA 58.372 34.615 0.00 0.00 34.07 4.26
1697 1929 8.273605 AGAAGATTTCTCTCATAAAAGGCTCAT 58.726 33.333 0.00 0.00 34.07 2.90
1698 1930 8.820153 AAGATTTCTCTCATAAAAGGCTCATT 57.180 30.769 0.00 0.00 0.00 2.57
1699 1931 8.820153 AGATTTCTCTCATAAAAGGCTCATTT 57.180 30.769 0.00 0.00 0.00 2.32
1700 1932 9.911788 AGATTTCTCTCATAAAAGGCTCATTTA 57.088 29.630 0.00 0.00 0.00 1.40
1713 1945 6.906157 AGGCTCATTTATTATGGATTGTGG 57.094 37.500 0.00 0.00 0.00 4.17
1714 1946 5.244626 AGGCTCATTTATTATGGATTGTGGC 59.755 40.000 0.00 0.00 0.00 5.01
1715 1947 5.156355 GCTCATTTATTATGGATTGTGGCG 58.844 41.667 0.00 0.00 0.00 5.69
1716 1948 5.119931 TCATTTATTATGGATTGTGGCGC 57.880 39.130 0.00 0.00 0.00 6.53
1717 1949 4.022416 TCATTTATTATGGATTGTGGCGCC 60.022 41.667 22.73 22.73 0.00 6.53
1718 1950 2.647683 TATTATGGATTGTGGCGCCA 57.352 45.000 29.03 29.03 35.91 5.69
1719 1951 1.774110 ATTATGGATTGTGGCGCCAA 58.226 45.000 34.66 18.73 34.95 4.52
1720 1952 1.550327 TTATGGATTGTGGCGCCAAA 58.450 45.000 34.66 26.51 34.95 3.28
1721 1953 1.774110 TATGGATTGTGGCGCCAAAT 58.226 45.000 34.66 29.42 34.95 2.32
1722 1954 0.903942 ATGGATTGTGGCGCCAAATT 59.096 45.000 34.66 23.52 34.95 1.82
1723 1955 0.037512 TGGATTGTGGCGCCAAATTG 60.038 50.000 34.66 0.00 0.00 2.32
1724 1956 0.740516 GGATTGTGGCGCCAAATTGG 60.741 55.000 34.66 7.84 41.55 3.16
1725 1957 0.246086 GATTGTGGCGCCAAATTGGA 59.754 50.000 34.66 11.75 40.96 3.53
1726 1958 0.247185 ATTGTGGCGCCAAATTGGAG 59.753 50.000 34.66 14.34 40.96 3.86
1731 1963 2.182537 CGCCAAATTGGAGCTGCC 59.817 61.111 17.47 0.00 40.96 4.85
1740 1972 3.675995 TGGAGCTGCCATCACATTT 57.324 47.368 1.53 0.00 43.33 2.32
1741 1973 1.179152 TGGAGCTGCCATCACATTTG 58.821 50.000 1.53 0.00 43.33 2.32
1742 1974 1.180029 GGAGCTGCCATCACATTTGT 58.820 50.000 0.00 0.00 36.34 2.83
1743 1975 2.290832 TGGAGCTGCCATCACATTTGTA 60.291 45.455 1.53 0.00 43.33 2.41
1744 1976 2.357009 GGAGCTGCCATCACATTTGTAG 59.643 50.000 0.00 0.00 36.34 2.74
1745 1977 2.357009 GAGCTGCCATCACATTTGTAGG 59.643 50.000 0.00 0.00 0.00 3.18
1746 1978 2.094675 GCTGCCATCACATTTGTAGGT 58.905 47.619 0.00 0.00 0.00 3.08
1747 1979 2.493278 GCTGCCATCACATTTGTAGGTT 59.507 45.455 0.00 0.00 0.00 3.50
1748 1980 3.056607 GCTGCCATCACATTTGTAGGTTT 60.057 43.478 0.00 0.00 0.00 3.27
1749 1981 4.561326 GCTGCCATCACATTTGTAGGTTTT 60.561 41.667 0.00 0.00 0.00 2.43
1770 2002 7.588854 GGTTTTATCCTTGTTACTTTTCACGAC 59.411 37.037 0.00 0.00 0.00 4.34
1789 2021 3.183574 CGACGATGAAAGCACTTGTTACA 59.816 43.478 0.00 0.00 0.00 2.41
1876 2108 1.743252 CCACTCTCGAGGGCAAAGC 60.743 63.158 13.59 0.00 0.00 3.51
1899 2131 3.259876 TGAACCGGCAGTAGTCTGTTATT 59.740 43.478 0.00 0.00 43.05 1.40
1917 2149 1.549243 TTCCGGTCCATGTGCTGCTA 61.549 55.000 0.00 0.00 0.00 3.49
1948 2180 4.225942 ACAATCCAGTGGATCTAAGAAGCA 59.774 41.667 25.01 0.00 42.27 3.91
1988 2220 1.503818 TTGAGCGTGCCTTCGAAACC 61.504 55.000 0.00 0.00 0.00 3.27
2055 2287 3.646946 CATCGAGATACCACCATGACAG 58.353 50.000 0.00 0.00 0.00 3.51
2058 2290 0.839946 AGATACCACCATGACAGCCC 59.160 55.000 0.00 0.00 0.00 5.19
2077 2309 1.604593 ACAACATCCCAGCCACAGC 60.605 57.895 0.00 0.00 40.32 4.40
2114 2346 8.994429 TGTTCATAGCAGAAAAGAAAACAAAA 57.006 26.923 0.00 0.00 0.00 2.44
2119 2351 4.225042 AGCAGAAAAGAAAACAAAAGGGGT 59.775 37.500 0.00 0.00 0.00 4.95
2126 2358 9.826574 GAAAAGAAAACAAAAGGGGTAAAGTAT 57.173 29.630 0.00 0.00 0.00 2.12
2154 2406 7.484007 CAGATATGTTGACTCAAAGTTTGCATC 59.516 37.037 10.90 10.62 0.00 3.91
2182 2437 1.242076 AAGCATGTCACTCTGGTTGC 58.758 50.000 0.00 0.00 32.27 4.17
2193 2448 5.292101 GTCACTCTGGTTGCAGTTATATCAC 59.708 44.000 0.00 0.00 0.00 3.06
2198 2455 7.119846 ACTCTGGTTGCAGTTATATCACTTTTC 59.880 37.037 0.00 0.00 0.00 2.29
2221 2646 2.962125 TGCGAAATAGTAGCACGGAAA 58.038 42.857 0.00 0.00 35.81 3.13
2222 2647 3.527533 TGCGAAATAGTAGCACGGAAAT 58.472 40.909 0.00 0.00 35.81 2.17
2226 2651 5.188194 CGAAATAGTAGCACGGAAATTTCG 58.812 41.667 11.95 11.93 44.91 3.46
2233 2658 1.202290 GCACGGAAATTTCGGATGCAT 60.202 47.619 27.87 0.00 36.09 3.96
2244 2669 1.134753 TCGGATGCATTGATTGGCAAC 59.865 47.619 0.00 0.00 44.20 4.17
2276 2701 9.658799 CTCAAGTTACTTAGATTTCTCCATGAA 57.341 33.333 0.00 0.00 0.00 2.57
2298 2723 0.671796 GGGTTTTGGAAGGGAACACG 59.328 55.000 0.00 0.00 0.00 4.49
2306 2731 1.079127 AAGGGAACACGCCTCATCG 60.079 57.895 0.00 0.00 0.00 3.84
2307 2732 1.541310 AAGGGAACACGCCTCATCGA 61.541 55.000 0.00 0.00 0.00 3.59
2311 2736 1.640428 GAACACGCCTCATCGATGAA 58.360 50.000 27.09 12.47 36.18 2.57
2312 2737 1.999735 GAACACGCCTCATCGATGAAA 59.000 47.619 27.09 8.05 36.18 2.69
2313 2738 2.315925 ACACGCCTCATCGATGAAAT 57.684 45.000 27.09 11.28 36.18 2.17
2316 2741 4.188462 ACACGCCTCATCGATGAAATAAA 58.812 39.130 27.09 5.83 36.18 1.40
2317 2742 4.634004 ACACGCCTCATCGATGAAATAAAA 59.366 37.500 27.09 5.11 36.18 1.52
2318 2743 5.200454 CACGCCTCATCGATGAAATAAAAG 58.800 41.667 27.09 14.29 36.18 2.27
2344 2769 7.790782 AAAACTGAGAGGAGAGTAGAGAATT 57.209 36.000 0.00 0.00 0.00 2.17
2380 2807 1.167851 CATCAAGTGGTTGGCACGAT 58.832 50.000 0.00 0.00 34.09 3.73
2395 2822 1.821753 CACGATCCTTCAGTGTCTCCT 59.178 52.381 0.00 0.00 0.00 3.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 5.333568 GCAAGTTCAAAGCATTGATGGAAAC 60.334 40.000 5.03 0.42 44.70 2.78
9 10 5.107220 GGAAAGCAAGTTCAAAGCATTGATG 60.107 40.000 5.03 2.46 44.70 3.07
10 11 4.992951 GGAAAGCAAGTTCAAAGCATTGAT 59.007 37.500 5.03 0.00 44.70 2.57
13 14 3.494924 GGGGAAAGCAAGTTCAAAGCATT 60.495 43.478 0.00 0.00 0.00 3.56
35 36 4.538746 AGAGTTTAAGGAGACCGGAAAG 57.461 45.455 9.46 0.00 0.00 2.62
41 42 4.755629 GTCCAACAAGAGTTTAAGGAGACC 59.244 45.833 0.00 0.00 35.28 3.85
115 116 1.065126 GCCCAAGGTAGACAAGAGCAT 60.065 52.381 0.00 0.00 0.00 3.79
127 128 0.188342 ACCAAGAATGTGCCCAAGGT 59.812 50.000 0.00 0.00 0.00 3.50
167 168 1.072266 TGTCACTTTGGCCCCTACAT 58.928 50.000 0.00 0.00 0.00 2.29
211 212 0.375803 GGTTGTGTCGTTGTGGTGAC 59.624 55.000 0.00 0.00 35.67 3.67
222 223 2.515057 TGCACGGGTGGTTGTGTC 60.515 61.111 0.43 0.00 38.36 3.67
223 224 2.826738 GTGCACGGGTGGTTGTGT 60.827 61.111 0.00 0.00 38.36 3.72
241 242 1.808945 GGAGAAGACTGCAACACCATG 59.191 52.381 0.00 0.00 34.59 3.66
242 243 1.421268 TGGAGAAGACTGCAACACCAT 59.579 47.619 0.00 0.00 41.25 3.55
267 268 1.598701 GCTTGAGGTTGTGGCCATCC 61.599 60.000 9.72 12.68 0.00 3.51
293 294 1.073025 AATGCAGCACCGTGGAGAA 59.927 52.632 0.00 0.00 0.00 2.87
309 310 2.086869 CATCCTTTCACCGAGCACAAT 58.913 47.619 0.00 0.00 0.00 2.71
310 311 1.071542 TCATCCTTTCACCGAGCACAA 59.928 47.619 0.00 0.00 0.00 3.33
311 312 0.684535 TCATCCTTTCACCGAGCACA 59.315 50.000 0.00 0.00 0.00 4.57
315 316 0.250234 TGCCTCATCCTTTCACCGAG 59.750 55.000 0.00 0.00 0.00 4.63
321 322 2.232208 CCAACCTTTGCCTCATCCTTTC 59.768 50.000 0.00 0.00 0.00 2.62
351 352 2.100631 CCCGTCCACGTCATGCTTC 61.101 63.158 0.00 0.00 37.74 3.86
357 358 1.189524 ATTTCCTCCCGTCCACGTCA 61.190 55.000 0.00 0.00 37.74 4.35
361 362 2.106683 CGCATTTCCTCCCGTCCAC 61.107 63.158 0.00 0.00 0.00 4.02
366 367 1.227556 CTACCCGCATTTCCTCCCG 60.228 63.158 0.00 0.00 0.00 5.14
370 371 1.141053 GATGGACTACCCGCATTTCCT 59.859 52.381 0.00 0.00 37.93 3.36
374 375 0.389391 CTCGATGGACTACCCGCATT 59.611 55.000 0.00 0.00 37.93 3.56
383 384 2.092103 AGGAGTAGAAGCTCGATGGACT 60.092 50.000 0.00 0.00 36.41 3.85
396 397 3.446516 GTCCCGCTCTTTTTAGGAGTAGA 59.553 47.826 0.00 0.00 33.73 2.59
402 403 1.641577 CTCGTCCCGCTCTTTTTAGG 58.358 55.000 0.00 0.00 0.00 2.69
414 415 8.672823 AGTAAACATATATTTTTCCTCGTCCC 57.327 34.615 0.13 0.00 0.00 4.46
470 471 3.277715 TGTGATGTTGCAACTCAGTTGA 58.722 40.909 28.61 8.52 45.28 3.18
471 472 3.696281 TGTGATGTTGCAACTCAGTTG 57.304 42.857 28.61 13.67 45.24 3.16
472 473 4.717233 TTTGTGATGTTGCAACTCAGTT 57.283 36.364 28.61 9.73 0.00 3.16
473 474 4.717233 TTTTGTGATGTTGCAACTCAGT 57.283 36.364 28.61 13.11 0.00 3.41
492 493 1.139947 CGGTGGCAACGTGGTTTTT 59.860 52.632 18.46 0.00 42.51 1.94
493 494 1.995646 GACGGTGGCAACGTGGTTTT 61.996 55.000 37.56 9.76 45.68 2.43
494 495 2.438795 ACGGTGGCAACGTGGTTT 60.439 55.556 31.97 4.01 43.78 3.27
495 496 2.898343 GACGGTGGCAACGTGGTT 60.898 61.111 37.56 11.16 45.68 3.67
496 497 4.922026 GGACGGTGGCAACGTGGT 62.922 66.667 37.56 11.63 45.68 4.16
498 499 4.953868 TCGGACGGTGGCAACGTG 62.954 66.667 37.56 22.29 45.68 4.49
518 519 2.512692 ACACCGGTTAAATTACCCCC 57.487 50.000 2.97 0.00 34.56 5.40
528 529 5.012975 ACCCTCAAACTATTAACACCGGTTA 59.987 40.000 2.97 0.00 38.45 2.85
529 530 4.202493 ACCCTCAAACTATTAACACCGGTT 60.202 41.667 2.97 0.00 41.06 4.44
530 531 3.328637 ACCCTCAAACTATTAACACCGGT 59.671 43.478 0.00 0.00 0.00 5.28
531 532 3.687698 CACCCTCAAACTATTAACACCGG 59.312 47.826 0.00 0.00 0.00 5.28
532 533 4.320870 ACACCCTCAAACTATTAACACCG 58.679 43.478 0.00 0.00 0.00 4.94
533 534 6.470278 ACTACACCCTCAAACTATTAACACC 58.530 40.000 0.00 0.00 0.00 4.16
534 535 7.974482 AACTACACCCTCAAACTATTAACAC 57.026 36.000 0.00 0.00 0.00 3.32
538 539 9.590451 CGATTAAACTACACCCTCAAACTATTA 57.410 33.333 0.00 0.00 0.00 0.98
539 540 8.316214 TCGATTAAACTACACCCTCAAACTATT 58.684 33.333 0.00 0.00 0.00 1.73
540 541 7.844009 TCGATTAAACTACACCCTCAAACTAT 58.156 34.615 0.00 0.00 0.00 2.12
541 542 7.230849 TCGATTAAACTACACCCTCAAACTA 57.769 36.000 0.00 0.00 0.00 2.24
542 543 6.105397 TCGATTAAACTACACCCTCAAACT 57.895 37.500 0.00 0.00 0.00 2.66
543 544 6.980051 ATCGATTAAACTACACCCTCAAAC 57.020 37.500 0.00 0.00 0.00 2.93
544 545 7.662258 TGAAATCGATTAAACTACACCCTCAAA 59.338 33.333 11.83 0.00 0.00 2.69
545 546 7.162761 TGAAATCGATTAAACTACACCCTCAA 58.837 34.615 11.83 0.00 0.00 3.02
546 547 6.703319 TGAAATCGATTAAACTACACCCTCA 58.297 36.000 11.83 3.94 0.00 3.86
547 548 7.787725 ATGAAATCGATTAAACTACACCCTC 57.212 36.000 11.83 1.19 0.00 4.30
548 549 8.483758 ACTATGAAATCGATTAAACTACACCCT 58.516 33.333 11.83 0.00 0.00 4.34
549 550 8.658499 ACTATGAAATCGATTAAACTACACCC 57.342 34.615 11.83 0.00 0.00 4.61
555 556 9.901172 ACCCTAAACTATGAAATCGATTAAACT 57.099 29.630 11.83 0.00 0.00 2.66
586 587 5.452636 CCTGAACTCTAGGGCTAGTTTCATC 60.453 48.000 0.93 0.00 36.57 2.92
609 610 5.904362 AGAGAAGTGCATATTTTCAACCC 57.096 39.130 0.00 0.00 0.00 4.11
632 633 7.400599 TCAACTCCTAGTGTTAATATGTCGT 57.599 36.000 0.00 0.00 0.00 4.34
635 636 6.099845 CCCCTCAACTCCTAGTGTTAATATGT 59.900 42.308 0.00 0.00 0.00 2.29
644 645 2.534042 TCTCCCCTCAACTCCTAGTG 57.466 55.000 0.00 0.00 0.00 2.74
645 646 3.786213 AATCTCCCCTCAACTCCTAGT 57.214 47.619 0.00 0.00 0.00 2.57
672 698 9.968743 GGAGTATAAAACAACGTCAGAATTAAG 57.031 33.333 0.00 0.00 0.00 1.85
675 701 7.972832 TGGAGTATAAAACAACGTCAGAATT 57.027 32.000 0.00 0.00 0.00 2.17
680 706 4.865925 CGGATGGAGTATAAAACAACGTCA 59.134 41.667 0.00 0.00 0.00 4.35
693 719 4.035112 AGTATTTGGGAACGGATGGAGTA 58.965 43.478 0.00 0.00 0.00 2.59
695 721 3.560636 AGTATTTGGGAACGGATGGAG 57.439 47.619 0.00 0.00 0.00 3.86
696 722 3.009695 ACAAGTATTTGGGAACGGATGGA 59.990 43.478 2.81 0.00 38.66 3.41
697 723 3.352648 ACAAGTATTTGGGAACGGATGG 58.647 45.455 2.81 0.00 38.66 3.51
698 724 4.261801 AGACAAGTATTTGGGAACGGATG 58.738 43.478 2.81 0.00 38.66 3.51
699 725 4.569719 AGACAAGTATTTGGGAACGGAT 57.430 40.909 2.81 0.00 38.66 4.18
700 726 4.360951 AAGACAAGTATTTGGGAACGGA 57.639 40.909 2.81 0.00 38.66 4.69
701 727 4.760204 AGAAAGACAAGTATTTGGGAACGG 59.240 41.667 2.81 0.00 38.66 4.44
702 728 5.941948 AGAAAGACAAGTATTTGGGAACG 57.058 39.130 2.81 0.00 38.66 3.95
703 729 6.127980 GCCTAGAAAGACAAGTATTTGGGAAC 60.128 42.308 2.81 0.00 38.66 3.62
704 730 5.944007 GCCTAGAAAGACAAGTATTTGGGAA 59.056 40.000 2.81 0.00 38.66 3.97
705 731 5.013704 TGCCTAGAAAGACAAGTATTTGGGA 59.986 40.000 2.81 0.00 38.66 4.37
706 732 5.253330 TGCCTAGAAAGACAAGTATTTGGG 58.747 41.667 2.81 0.00 38.66 4.12
707 733 7.396540 AATGCCTAGAAAGACAAGTATTTGG 57.603 36.000 2.81 0.00 38.66 3.28
708 734 8.514594 TGAAATGCCTAGAAAGACAAGTATTTG 58.485 33.333 0.00 0.00 40.24 2.32
709 735 8.635765 TGAAATGCCTAGAAAGACAAGTATTT 57.364 30.769 0.00 0.00 0.00 1.40
710 736 8.635765 TTGAAATGCCTAGAAAGACAAGTATT 57.364 30.769 0.00 0.00 0.00 1.89
711 737 8.635765 TTTGAAATGCCTAGAAAGACAAGTAT 57.364 30.769 0.00 0.00 0.00 2.12
712 738 8.514594 CATTTGAAATGCCTAGAAAGACAAGTA 58.485 33.333 4.82 0.00 0.00 2.24
713 739 6.959639 TTTGAAATGCCTAGAAAGACAAGT 57.040 33.333 0.00 0.00 0.00 3.16
714 740 6.810182 CCATTTGAAATGCCTAGAAAGACAAG 59.190 38.462 12.26 0.00 0.00 3.16
715 741 6.493115 TCCATTTGAAATGCCTAGAAAGACAA 59.507 34.615 12.26 0.00 0.00 3.18
716 742 6.009589 TCCATTTGAAATGCCTAGAAAGACA 58.990 36.000 12.26 0.00 0.00 3.41
717 743 6.151817 AGTCCATTTGAAATGCCTAGAAAGAC 59.848 38.462 12.26 10.86 0.00 3.01
718 744 6.248433 AGTCCATTTGAAATGCCTAGAAAGA 58.752 36.000 12.26 0.00 0.00 2.52
719 745 6.151648 TGAGTCCATTTGAAATGCCTAGAAAG 59.848 38.462 12.26 0.00 0.00 2.62
720 746 6.009589 TGAGTCCATTTGAAATGCCTAGAAA 58.990 36.000 12.26 0.00 0.00 2.52
721 747 5.569355 TGAGTCCATTTGAAATGCCTAGAA 58.431 37.500 12.26 0.00 0.00 2.10
722 748 5.178096 TGAGTCCATTTGAAATGCCTAGA 57.822 39.130 12.26 1.83 0.00 2.43
723 749 5.183713 TGTTGAGTCCATTTGAAATGCCTAG 59.816 40.000 12.26 0.00 0.00 3.02
724 750 5.076182 TGTTGAGTCCATTTGAAATGCCTA 58.924 37.500 12.26 0.00 0.00 3.93
725 751 3.896888 TGTTGAGTCCATTTGAAATGCCT 59.103 39.130 12.26 9.70 0.00 4.75
726 752 4.255833 TGTTGAGTCCATTTGAAATGCC 57.744 40.909 12.26 5.23 0.00 4.40
727 753 5.512788 CGTATGTTGAGTCCATTTGAAATGC 59.487 40.000 12.26 0.23 0.00 3.56
728 754 6.029607 CCGTATGTTGAGTCCATTTGAAATG 58.970 40.000 10.84 10.84 0.00 2.32
729 755 5.943416 TCCGTATGTTGAGTCCATTTGAAAT 59.057 36.000 0.00 0.00 0.00 2.17
730 756 5.309638 TCCGTATGTTGAGTCCATTTGAAA 58.690 37.500 0.00 0.00 0.00 2.69
731 757 4.900684 TCCGTATGTTGAGTCCATTTGAA 58.099 39.130 0.00 0.00 0.00 2.69
732 758 4.545208 TCCGTATGTTGAGTCCATTTGA 57.455 40.909 0.00 0.00 0.00 2.69
733 759 4.635765 ACATCCGTATGTTGAGTCCATTTG 59.364 41.667 0.00 0.00 44.07 2.32
734 760 4.843728 ACATCCGTATGTTGAGTCCATTT 58.156 39.130 0.00 0.00 44.07 2.32
735 761 4.487714 ACATCCGTATGTTGAGTCCATT 57.512 40.909 0.00 0.00 44.07 3.16
736 762 5.541845 CATACATCCGTATGTTGAGTCCAT 58.458 41.667 0.00 0.00 46.70 3.41
737 763 4.944048 CATACATCCGTATGTTGAGTCCA 58.056 43.478 0.00 0.00 46.70 4.02
775 801 4.091424 GCGCAAAATGAGTGAATCTACAC 58.909 43.478 0.30 0.00 40.60 2.90
776 802 3.126858 GGCGCAAAATGAGTGAATCTACA 59.873 43.478 10.83 0.00 0.00 2.74
777 803 3.685058 GGCGCAAAATGAGTGAATCTAC 58.315 45.455 10.83 0.00 0.00 2.59
778 804 2.351418 CGGCGCAAAATGAGTGAATCTA 59.649 45.455 10.83 0.00 0.00 1.98
779 805 1.131126 CGGCGCAAAATGAGTGAATCT 59.869 47.619 10.83 0.00 0.00 2.40
780 806 1.135689 ACGGCGCAAAATGAGTGAATC 60.136 47.619 10.83 0.00 0.00 2.52
781 807 0.881118 ACGGCGCAAAATGAGTGAAT 59.119 45.000 10.83 0.00 0.00 2.57
782 808 1.514003 TACGGCGCAAAATGAGTGAA 58.486 45.000 10.83 0.00 0.00 3.18
783 809 1.396648 CATACGGCGCAAAATGAGTGA 59.603 47.619 10.83 0.00 0.00 3.41
784 810 1.130373 ACATACGGCGCAAAATGAGTG 59.870 47.619 10.83 0.00 0.00 3.51
785 811 1.448985 ACATACGGCGCAAAATGAGT 58.551 45.000 10.83 0.00 0.00 3.41
786 812 2.607635 ACTACATACGGCGCAAAATGAG 59.392 45.455 10.83 10.39 0.00 2.90
787 813 2.605818 GACTACATACGGCGCAAAATGA 59.394 45.455 10.83 0.00 0.00 2.57
788 814 2.350192 TGACTACATACGGCGCAAAATG 59.650 45.455 10.83 11.57 0.00 2.32
789 815 2.350498 GTGACTACATACGGCGCAAAAT 59.650 45.455 10.83 0.00 0.00 1.82
790 816 1.727880 GTGACTACATACGGCGCAAAA 59.272 47.619 10.83 0.00 0.00 2.44
791 817 1.067425 AGTGACTACATACGGCGCAAA 60.067 47.619 10.83 0.00 0.00 3.68
792 818 0.528924 AGTGACTACATACGGCGCAA 59.471 50.000 10.83 0.00 0.00 4.85
793 819 0.528924 AAGTGACTACATACGGCGCA 59.471 50.000 10.83 0.00 0.00 6.09
794 820 0.921347 CAAGTGACTACATACGGCGC 59.079 55.000 6.90 0.00 0.00 6.53
795 821 2.273370 ACAAGTGACTACATACGGCG 57.727 50.000 4.80 4.80 0.00 6.46
796 822 6.470557 TTTTAACAAGTGACTACATACGGC 57.529 37.500 0.00 0.00 0.00 5.68
797 823 8.475331 AGATTTTAACAAGTGACTACATACGG 57.525 34.615 0.00 0.00 0.00 4.02
798 824 9.355215 AGAGATTTTAACAAGTGACTACATACG 57.645 33.333 0.00 0.00 0.00 3.06
821 847 9.291664 CGTTCCTAAATACTTGTCTTTCTAGAG 57.708 37.037 0.00 0.00 0.00 2.43
822 848 8.248945 CCGTTCCTAAATACTTGTCTTTCTAGA 58.751 37.037 0.00 0.00 0.00 2.43
823 849 8.248945 TCCGTTCCTAAATACTTGTCTTTCTAG 58.751 37.037 0.00 0.00 0.00 2.43
824 850 8.125978 TCCGTTCCTAAATACTTGTCTTTCTA 57.874 34.615 0.00 0.00 0.00 2.10
825 851 7.001099 TCCGTTCCTAAATACTTGTCTTTCT 57.999 36.000 0.00 0.00 0.00 2.52
826 852 7.148457 CCTTCCGTTCCTAAATACTTGTCTTTC 60.148 40.741 0.00 0.00 0.00 2.62
827 853 6.653740 CCTTCCGTTCCTAAATACTTGTCTTT 59.346 38.462 0.00 0.00 0.00 2.52
828 854 6.013984 TCCTTCCGTTCCTAAATACTTGTCTT 60.014 38.462 0.00 0.00 0.00 3.01
829 855 5.482878 TCCTTCCGTTCCTAAATACTTGTCT 59.517 40.000 0.00 0.00 0.00 3.41
830 856 5.727434 TCCTTCCGTTCCTAAATACTTGTC 58.273 41.667 0.00 0.00 0.00 3.18
831 857 5.247792 ACTCCTTCCGTTCCTAAATACTTGT 59.752 40.000 0.00 0.00 0.00 3.16
832 858 5.731591 ACTCCTTCCGTTCCTAAATACTTG 58.268 41.667 0.00 0.00 0.00 3.16
833 859 6.894103 TCTACTCCTTCCGTTCCTAAATACTT 59.106 38.462 0.00 0.00 0.00 2.24
834 860 6.430007 TCTACTCCTTCCGTTCCTAAATACT 58.570 40.000 0.00 0.00 0.00 2.12
835 861 6.705863 TCTACTCCTTCCGTTCCTAAATAC 57.294 41.667 0.00 0.00 0.00 1.89
836 862 7.909485 AATCTACTCCTTCCGTTCCTAAATA 57.091 36.000 0.00 0.00 0.00 1.40
837 863 6.809976 AATCTACTCCTTCCGTTCCTAAAT 57.190 37.500 0.00 0.00 0.00 1.40
838 864 6.894103 AGTAATCTACTCCTTCCGTTCCTAAA 59.106 38.462 0.00 0.00 32.47 1.85
839 865 6.430007 AGTAATCTACTCCTTCCGTTCCTAA 58.570 40.000 0.00 0.00 32.47 2.69
840 866 6.011122 AGTAATCTACTCCTTCCGTTCCTA 57.989 41.667 0.00 0.00 32.47 2.94
841 867 4.869451 AGTAATCTACTCCTTCCGTTCCT 58.131 43.478 0.00 0.00 32.47 3.36
842 868 6.705863 TTAGTAATCTACTCCTTCCGTTCC 57.294 41.667 0.00 0.00 40.14 3.62
843 869 7.770201 ACTTTAGTAATCTACTCCTTCCGTTC 58.230 38.462 0.00 0.00 40.14 3.95
844 870 7.715266 ACTTTAGTAATCTACTCCTTCCGTT 57.285 36.000 0.00 0.00 40.14 4.44
845 871 7.715266 AACTTTAGTAATCTACTCCTTCCGT 57.285 36.000 0.00 0.00 40.14 4.69
876 902 9.868277 CCCATTTTTCTTTTTGTACATATGCTA 57.132 29.630 1.58 0.00 0.00 3.49
895 921 5.596361 TGGCATTTCATATCGTACCCATTTT 59.404 36.000 0.00 0.00 0.00 1.82
1045 1071 7.534578 CGCCTCGTTACAATTAAAAATAACACA 59.465 33.333 6.81 0.00 0.00 3.72
1131 1159 1.472480 GATTGCACCATTACTTGCCGT 59.528 47.619 0.00 0.00 38.00 5.68
1198 1226 0.981183 AGGTGTCCATAAGCCGAACA 59.019 50.000 0.00 0.00 0.00 3.18
1234 1262 6.268387 ACAAACTCCCTTTCATTCATCAATGT 59.732 34.615 0.00 0.00 40.47 2.71
1237 1265 6.239289 GGAACAAACTCCCTTTCATTCATCAA 60.239 38.462 0.00 0.00 0.00 2.57
1443 1675 5.938279 ACCGTAGATACTTGGATACTCTCA 58.062 41.667 0.00 0.00 37.61 3.27
1444 1676 7.976135 TTACCGTAGATACTTGGATACTCTC 57.024 40.000 0.00 0.00 37.61 3.20
1445 1677 7.997803 ACTTTACCGTAGATACTTGGATACTCT 59.002 37.037 0.00 0.00 37.61 3.24
1446 1678 8.164058 ACTTTACCGTAGATACTTGGATACTC 57.836 38.462 0.00 0.00 37.61 2.59
1447 1679 9.804977 ATACTTTACCGTAGATACTTGGATACT 57.195 33.333 0.00 0.00 37.61 2.12
1448 1680 9.837525 CATACTTTACCGTAGATACTTGGATAC 57.162 37.037 0.00 0.00 0.00 2.24
1449 1681 8.517878 GCATACTTTACCGTAGATACTTGGATA 58.482 37.037 0.00 0.00 0.00 2.59
1450 1682 7.014905 TGCATACTTTACCGTAGATACTTGGAT 59.985 37.037 0.00 0.00 0.00 3.41
1451 1683 6.321945 TGCATACTTTACCGTAGATACTTGGA 59.678 38.462 0.00 0.00 0.00 3.53
1452 1684 6.509656 TGCATACTTTACCGTAGATACTTGG 58.490 40.000 0.00 0.00 0.00 3.61
1453 1685 6.641314 CCTGCATACTTTACCGTAGATACTTG 59.359 42.308 0.00 0.00 0.00 3.16
1454 1686 6.548622 TCCTGCATACTTTACCGTAGATACTT 59.451 38.462 0.00 0.00 0.00 2.24
1455 1687 6.066690 TCCTGCATACTTTACCGTAGATACT 58.933 40.000 0.00 0.00 0.00 2.12
1456 1688 6.323203 TCCTGCATACTTTACCGTAGATAC 57.677 41.667 0.00 0.00 0.00 2.24
1457 1689 6.964807 TTCCTGCATACTTTACCGTAGATA 57.035 37.500 0.00 0.00 0.00 1.98
1458 1690 5.864418 TTCCTGCATACTTTACCGTAGAT 57.136 39.130 0.00 0.00 0.00 1.98
1459 1691 5.664294 TTTCCTGCATACTTTACCGTAGA 57.336 39.130 0.00 0.00 0.00 2.59
1460 1692 6.730960 TTTTTCCTGCATACTTTACCGTAG 57.269 37.500 0.00 0.00 0.00 3.51
1461 1693 6.403855 GCATTTTTCCTGCATACTTTACCGTA 60.404 38.462 0.00 0.00 39.46 4.02
1462 1694 5.621329 GCATTTTTCCTGCATACTTTACCGT 60.621 40.000 0.00 0.00 39.46 4.83
1463 1695 4.798387 GCATTTTTCCTGCATACTTTACCG 59.202 41.667 0.00 0.00 39.46 4.02
1464 1696 5.965922 AGCATTTTTCCTGCATACTTTACC 58.034 37.500 0.00 0.00 42.15 2.85
1465 1697 8.980143 TTAAGCATTTTTCCTGCATACTTTAC 57.020 30.769 0.00 0.00 42.15 2.01
1473 1705 9.762933 GGAATATATTTAAGCATTTTTCCTGCA 57.237 29.630 0.00 0.00 42.15 4.41
1474 1706 9.762933 TGGAATATATTTAAGCATTTTTCCTGC 57.237 29.630 0.00 0.00 39.97 4.85
1483 1715 8.956426 CGGTAATGGTGGAATATATTTAAGCAT 58.044 33.333 15.10 15.10 0.00 3.79
1484 1716 7.940137 ACGGTAATGGTGGAATATATTTAAGCA 59.060 33.333 12.71 12.71 0.00 3.91
1485 1717 8.331730 ACGGTAATGGTGGAATATATTTAAGC 57.668 34.615 0.00 2.06 0.00 3.09
1489 1721 8.607713 TGGATACGGTAATGGTGGAATATATTT 58.392 33.333 0.00 0.00 42.51 1.40
1490 1722 8.044908 GTGGATACGGTAATGGTGGAATATATT 58.955 37.037 0.00 0.00 42.51 1.28
1491 1723 7.181305 TGTGGATACGGTAATGGTGGAATATAT 59.819 37.037 0.00 0.00 42.51 0.86
1492 1724 6.497606 TGTGGATACGGTAATGGTGGAATATA 59.502 38.462 0.00 0.00 42.51 0.86
1493 1725 5.308497 TGTGGATACGGTAATGGTGGAATAT 59.692 40.000 0.00 0.00 42.51 1.28
1494 1726 4.654724 TGTGGATACGGTAATGGTGGAATA 59.345 41.667 0.00 0.00 42.51 1.75
1495 1727 3.456644 TGTGGATACGGTAATGGTGGAAT 59.543 43.478 0.00 0.00 42.51 3.01
1496 1728 2.838813 TGTGGATACGGTAATGGTGGAA 59.161 45.455 0.00 0.00 42.51 3.53
1497 1729 2.468915 TGTGGATACGGTAATGGTGGA 58.531 47.619 0.00 0.00 42.51 4.02
1498 1730 2.992124 TGTGGATACGGTAATGGTGG 57.008 50.000 0.00 0.00 42.51 4.61
1499 1731 5.849510 TCTATTGTGGATACGGTAATGGTG 58.150 41.667 0.00 0.00 42.51 4.17
1500 1732 6.488769 TTCTATTGTGGATACGGTAATGGT 57.511 37.500 0.00 0.00 42.51 3.55
1501 1733 7.979444 ATTTCTATTGTGGATACGGTAATGG 57.021 36.000 0.00 0.00 42.51 3.16
1502 1734 7.803189 GCAATTTCTATTGTGGATACGGTAATG 59.197 37.037 0.00 0.00 42.56 1.90
1503 1735 7.500892 TGCAATTTCTATTGTGGATACGGTAAT 59.499 33.333 0.00 0.00 42.56 1.89
1504 1736 6.824196 TGCAATTTCTATTGTGGATACGGTAA 59.176 34.615 0.00 0.00 42.56 2.85
1505 1737 6.350103 TGCAATTTCTATTGTGGATACGGTA 58.650 36.000 0.00 0.00 42.56 4.02
1506 1738 5.189928 TGCAATTTCTATTGTGGATACGGT 58.810 37.500 0.00 0.00 42.56 4.83
1507 1739 5.749596 TGCAATTTCTATTGTGGATACGG 57.250 39.130 0.00 0.00 42.56 4.02
1508 1740 5.207768 GCTGCAATTTCTATTGTGGATACG 58.792 41.667 0.00 0.00 42.56 3.06
1509 1741 6.135290 TGCTGCAATTTCTATTGTGGATAC 57.865 37.500 0.00 0.00 42.56 2.24
1510 1742 6.377996 ACTTGCTGCAATTTCTATTGTGGATA 59.622 34.615 16.38 0.00 42.56 2.59
1511 1743 5.186409 ACTTGCTGCAATTTCTATTGTGGAT 59.814 36.000 16.38 0.00 42.56 3.41
1512 1744 4.523943 ACTTGCTGCAATTTCTATTGTGGA 59.476 37.500 16.38 0.00 42.56 4.02
1513 1745 4.624024 CACTTGCTGCAATTTCTATTGTGG 59.376 41.667 16.38 2.02 42.56 4.17
1514 1746 4.624024 CCACTTGCTGCAATTTCTATTGTG 59.376 41.667 16.38 16.03 42.56 3.33
1515 1747 4.281688 ACCACTTGCTGCAATTTCTATTGT 59.718 37.500 16.38 4.69 42.56 2.71
1516 1748 4.624024 CACCACTTGCTGCAATTTCTATTG 59.376 41.667 16.38 4.03 43.28 1.90
1517 1749 4.523943 TCACCACTTGCTGCAATTTCTATT 59.476 37.500 16.38 0.00 0.00 1.73
1518 1750 4.081406 TCACCACTTGCTGCAATTTCTAT 58.919 39.130 16.38 0.00 0.00 1.98
1519 1751 3.485394 TCACCACTTGCTGCAATTTCTA 58.515 40.909 16.38 0.00 0.00 2.10
1520 1752 2.309613 TCACCACTTGCTGCAATTTCT 58.690 42.857 16.38 0.00 0.00 2.52
1521 1753 2.798976 TCACCACTTGCTGCAATTTC 57.201 45.000 16.38 0.00 0.00 2.17
1522 1754 3.540314 TTTCACCACTTGCTGCAATTT 57.460 38.095 16.38 3.07 0.00 1.82
1523 1755 3.118665 ACTTTTCACCACTTGCTGCAATT 60.119 39.130 16.38 7.55 0.00 2.32
1524 1756 2.431782 ACTTTTCACCACTTGCTGCAAT 59.568 40.909 16.38 3.60 0.00 3.56
1525 1757 1.824230 ACTTTTCACCACTTGCTGCAA 59.176 42.857 15.16 15.16 0.00 4.08
1526 1758 1.405105 GACTTTTCACCACTTGCTGCA 59.595 47.619 0.00 0.00 0.00 4.41
1527 1759 1.405105 TGACTTTTCACCACTTGCTGC 59.595 47.619 0.00 0.00 0.00 5.25
1528 1760 2.945008 TCTGACTTTTCACCACTTGCTG 59.055 45.455 0.00 0.00 0.00 4.41
1529 1761 3.281727 TCTGACTTTTCACCACTTGCT 57.718 42.857 0.00 0.00 0.00 3.91
1530 1762 4.276926 AGATTCTGACTTTTCACCACTTGC 59.723 41.667 0.00 0.00 0.00 4.01
1531 1763 7.012327 TGTTAGATTCTGACTTTTCACCACTTG 59.988 37.037 9.68 0.00 0.00 3.16
1532 1764 7.054124 TGTTAGATTCTGACTTTTCACCACTT 58.946 34.615 9.68 0.00 0.00 3.16
1533 1765 6.591935 TGTTAGATTCTGACTTTTCACCACT 58.408 36.000 9.68 0.00 0.00 4.00
1534 1766 6.861065 TGTTAGATTCTGACTTTTCACCAC 57.139 37.500 9.68 0.00 0.00 4.16
1535 1767 7.719193 TCATTGTTAGATTCTGACTTTTCACCA 59.281 33.333 9.68 0.00 0.00 4.17
1536 1768 8.099364 TCATTGTTAGATTCTGACTTTTCACC 57.901 34.615 9.68 0.00 0.00 4.02
1537 1769 9.950680 TTTCATTGTTAGATTCTGACTTTTCAC 57.049 29.630 9.68 0.00 0.00 3.18
1543 1775 9.956720 CTTGTTTTTCATTGTTAGATTCTGACT 57.043 29.630 9.68 0.00 0.00 3.41
1544 1776 9.950680 TCTTGTTTTTCATTGTTAGATTCTGAC 57.049 29.630 1.77 1.77 0.00 3.51
1554 1786 8.503196 GGTTCAACTTTCTTGTTTTTCATTGTT 58.497 29.630 0.00 0.00 0.00 2.83
1555 1787 7.148656 CGGTTCAACTTTCTTGTTTTTCATTGT 60.149 33.333 0.00 0.00 0.00 2.71
1556 1788 7.062839 TCGGTTCAACTTTCTTGTTTTTCATTG 59.937 33.333 0.00 0.00 0.00 2.82
1557 1789 7.093992 TCGGTTCAACTTTCTTGTTTTTCATT 58.906 30.769 0.00 0.00 0.00 2.57
1558 1790 6.626302 TCGGTTCAACTTTCTTGTTTTTCAT 58.374 32.000 0.00 0.00 0.00 2.57
1559 1791 6.015027 TCGGTTCAACTTTCTTGTTTTTCA 57.985 33.333 0.00 0.00 0.00 2.69
1560 1792 6.937886 TTCGGTTCAACTTTCTTGTTTTTC 57.062 33.333 0.00 0.00 0.00 2.29
1561 1793 7.093992 TCATTCGGTTCAACTTTCTTGTTTTT 58.906 30.769 0.00 0.00 0.00 1.94
1562 1794 6.626302 TCATTCGGTTCAACTTTCTTGTTTT 58.374 32.000 0.00 0.00 0.00 2.43
1563 1795 6.202516 TCATTCGGTTCAACTTTCTTGTTT 57.797 33.333 0.00 0.00 0.00 2.83
1564 1796 5.828299 TCATTCGGTTCAACTTTCTTGTT 57.172 34.783 0.00 0.00 0.00 2.83
1565 1797 5.221048 CCTTCATTCGGTTCAACTTTCTTGT 60.221 40.000 0.00 0.00 0.00 3.16
1566 1798 5.215160 CCTTCATTCGGTTCAACTTTCTTG 58.785 41.667 0.00 0.00 0.00 3.02
1567 1799 4.278419 CCCTTCATTCGGTTCAACTTTCTT 59.722 41.667 0.00 0.00 0.00 2.52
1568 1800 3.821033 CCCTTCATTCGGTTCAACTTTCT 59.179 43.478 0.00 0.00 0.00 2.52
1569 1801 3.568430 ACCCTTCATTCGGTTCAACTTTC 59.432 43.478 0.00 0.00 0.00 2.62
1570 1802 3.562182 ACCCTTCATTCGGTTCAACTTT 58.438 40.909 0.00 0.00 0.00 2.66
1571 1803 3.223674 ACCCTTCATTCGGTTCAACTT 57.776 42.857 0.00 0.00 0.00 2.66
1572 1804 2.951229 ACCCTTCATTCGGTTCAACT 57.049 45.000 0.00 0.00 0.00 3.16
1573 1805 5.182380 TGATTAACCCTTCATTCGGTTCAAC 59.818 40.000 0.00 0.00 41.50 3.18
1574 1806 5.317808 TGATTAACCCTTCATTCGGTTCAA 58.682 37.500 0.00 0.00 41.50 2.69
1575 1807 4.912586 TGATTAACCCTTCATTCGGTTCA 58.087 39.130 0.00 0.00 41.50 3.18
1576 1808 5.676331 GCTTGATTAACCCTTCATTCGGTTC 60.676 44.000 0.00 0.00 41.50 3.62
1577 1809 4.157840 GCTTGATTAACCCTTCATTCGGTT 59.842 41.667 0.00 0.00 44.55 4.44
1578 1810 3.694566 GCTTGATTAACCCTTCATTCGGT 59.305 43.478 0.00 0.00 0.00 4.69
1579 1811 3.066760 GGCTTGATTAACCCTTCATTCGG 59.933 47.826 0.00 0.00 0.00 4.30
1580 1812 3.694072 TGGCTTGATTAACCCTTCATTCG 59.306 43.478 0.00 0.00 0.00 3.34
1581 1813 4.462483 TGTGGCTTGATTAACCCTTCATTC 59.538 41.667 0.00 0.00 0.00 2.67
1582 1814 4.220602 GTGTGGCTTGATTAACCCTTCATT 59.779 41.667 0.00 0.00 0.00 2.57
1583 1815 3.763897 GTGTGGCTTGATTAACCCTTCAT 59.236 43.478 0.00 0.00 0.00 2.57
1584 1816 3.153919 GTGTGGCTTGATTAACCCTTCA 58.846 45.455 0.00 0.00 0.00 3.02
1585 1817 3.153919 TGTGTGGCTTGATTAACCCTTC 58.846 45.455 0.00 0.00 0.00 3.46
1586 1818 3.237268 TGTGTGGCTTGATTAACCCTT 57.763 42.857 0.00 0.00 0.00 3.95
1587 1819 2.969821 TGTGTGGCTTGATTAACCCT 57.030 45.000 0.00 0.00 0.00 4.34
1588 1820 5.652994 TTAATGTGTGGCTTGATTAACCC 57.347 39.130 0.00 0.00 0.00 4.11
1589 1821 6.630071 ACATTAATGTGTGGCTTGATTAACC 58.370 36.000 20.19 0.00 40.03 2.85
1590 1822 6.468956 CGACATTAATGTGTGGCTTGATTAAC 59.531 38.462 25.42 5.12 41.95 2.01
1591 1823 6.150307 ACGACATTAATGTGTGGCTTGATTAA 59.850 34.615 25.42 0.00 41.95 1.40
1592 1824 5.645929 ACGACATTAATGTGTGGCTTGATTA 59.354 36.000 25.42 0.00 41.95 1.75
1593 1825 4.458989 ACGACATTAATGTGTGGCTTGATT 59.541 37.500 25.42 0.00 41.95 2.57
1594 1826 4.009675 ACGACATTAATGTGTGGCTTGAT 58.990 39.130 25.42 0.00 41.95 2.57
1595 1827 3.407698 ACGACATTAATGTGTGGCTTGA 58.592 40.909 25.42 0.00 41.95 3.02
1596 1828 3.829886 ACGACATTAATGTGTGGCTTG 57.170 42.857 25.42 6.51 41.95 4.01
1597 1829 5.950758 TTAACGACATTAATGTGTGGCTT 57.049 34.783 25.42 10.90 41.95 4.35
1598 1830 5.703592 TCTTTAACGACATTAATGTGTGGCT 59.296 36.000 25.42 11.27 41.95 4.75
1599 1831 5.933790 TCTTTAACGACATTAATGTGTGGC 58.066 37.500 25.42 10.05 41.95 5.01
1600 1832 8.964420 AAATCTTTAACGACATTAATGTGTGG 57.036 30.769 25.42 15.65 41.95 4.17
1602 1834 9.405587 CCAAAATCTTTAACGACATTAATGTGT 57.594 29.630 25.42 18.78 41.95 3.72
1603 1835 9.405587 ACCAAAATCTTTAACGACATTAATGTG 57.594 29.630 25.42 18.20 41.95 3.21
1604 1836 9.974980 AACCAAAATCTTTAACGACATTAATGT 57.025 25.926 20.93 20.93 45.16 2.71
1606 1838 9.634163 GGAACCAAAATCTTTAACGACATTAAT 57.366 29.630 0.00 0.00 32.71 1.40
1607 1839 8.852135 AGGAACCAAAATCTTTAACGACATTAA 58.148 29.630 0.00 0.00 0.00 1.40
1608 1840 8.398878 AGGAACCAAAATCTTTAACGACATTA 57.601 30.769 0.00 0.00 0.00 1.90
1609 1841 7.284919 AGGAACCAAAATCTTTAACGACATT 57.715 32.000 0.00 0.00 0.00 2.71
1610 1842 6.894339 AGGAACCAAAATCTTTAACGACAT 57.106 33.333 0.00 0.00 0.00 3.06
1611 1843 7.804843 TTAGGAACCAAAATCTTTAACGACA 57.195 32.000 0.00 0.00 0.00 4.35
1612 1844 8.727910 AGATTAGGAACCAAAATCTTTAACGAC 58.272 33.333 12.51 0.00 36.76 4.34
1613 1845 8.857694 AGATTAGGAACCAAAATCTTTAACGA 57.142 30.769 12.51 0.00 36.76 3.85
1614 1846 7.903431 CGAGATTAGGAACCAAAATCTTTAACG 59.097 37.037 16.71 13.25 39.46 3.18
1615 1847 7.696872 GCGAGATTAGGAACCAAAATCTTTAAC 59.303 37.037 16.71 8.11 39.46 2.01
1616 1848 7.392113 TGCGAGATTAGGAACCAAAATCTTTAA 59.608 33.333 16.71 7.79 39.46 1.52
1617 1849 6.882140 TGCGAGATTAGGAACCAAAATCTTTA 59.118 34.615 16.71 8.45 39.46 1.85
1618 1850 5.710099 TGCGAGATTAGGAACCAAAATCTTT 59.290 36.000 16.71 3.31 39.46 2.52
1619 1851 5.253330 TGCGAGATTAGGAACCAAAATCTT 58.747 37.500 16.71 6.70 39.46 2.40
1620 1852 4.843728 TGCGAGATTAGGAACCAAAATCT 58.156 39.130 16.04 16.04 41.48 2.40
1621 1853 4.876107 TCTGCGAGATTAGGAACCAAAATC 59.124 41.667 9.45 9.45 0.00 2.17
1622 1854 4.843728 TCTGCGAGATTAGGAACCAAAAT 58.156 39.130 0.00 0.00 0.00 1.82
1623 1855 4.280436 TCTGCGAGATTAGGAACCAAAA 57.720 40.909 0.00 0.00 0.00 2.44
1624 1856 3.973206 TCTGCGAGATTAGGAACCAAA 57.027 42.857 0.00 0.00 0.00 3.28
1625 1857 3.513912 TCTTCTGCGAGATTAGGAACCAA 59.486 43.478 0.00 0.00 0.00 3.67
1626 1858 3.096852 TCTTCTGCGAGATTAGGAACCA 58.903 45.455 0.00 0.00 0.00 3.67
1627 1859 3.119101 TGTCTTCTGCGAGATTAGGAACC 60.119 47.826 0.00 0.00 0.00 3.62
1628 1860 4.111375 TGTCTTCTGCGAGATTAGGAAC 57.889 45.455 0.00 0.00 0.00 3.62
1629 1861 4.382040 CCTTGTCTTCTGCGAGATTAGGAA 60.382 45.833 0.00 0.00 33.97 3.36
1630 1862 3.131223 CCTTGTCTTCTGCGAGATTAGGA 59.869 47.826 0.00 0.00 33.97 2.94
1631 1863 3.118956 ACCTTGTCTTCTGCGAGATTAGG 60.119 47.826 0.00 10.58 36.21 2.69
1632 1864 4.116747 ACCTTGTCTTCTGCGAGATTAG 57.883 45.455 0.00 0.00 0.00 1.73
1633 1865 4.705507 ACTACCTTGTCTTCTGCGAGATTA 59.294 41.667 0.00 0.00 0.00 1.75
1634 1866 3.511934 ACTACCTTGTCTTCTGCGAGATT 59.488 43.478 0.00 0.00 0.00 2.40
1635 1867 3.093057 ACTACCTTGTCTTCTGCGAGAT 58.907 45.455 0.00 0.00 0.00 2.75
1636 1868 2.488545 GACTACCTTGTCTTCTGCGAGA 59.511 50.000 0.00 0.00 34.39 4.04
1637 1869 2.229062 TGACTACCTTGTCTTCTGCGAG 59.771 50.000 0.00 0.00 37.79 5.03
1638 1870 2.030185 GTGACTACCTTGTCTTCTGCGA 60.030 50.000 0.00 0.00 37.79 5.10
1639 1871 2.288213 TGTGACTACCTTGTCTTCTGCG 60.288 50.000 0.00 0.00 37.79 5.18
1640 1872 3.386768 TGTGACTACCTTGTCTTCTGC 57.613 47.619 0.00 0.00 37.79 4.26
1641 1873 6.867662 ATTTTGTGACTACCTTGTCTTCTG 57.132 37.500 0.00 0.00 37.79 3.02
1642 1874 8.974060 TTTATTTTGTGACTACCTTGTCTTCT 57.026 30.769 0.00 0.00 37.79 2.85
1671 1903 7.628234 TGAGCCTTTTATGAGAGAAATCTTCT 58.372 34.615 0.00 0.00 44.21 2.85
1672 1904 7.856145 TGAGCCTTTTATGAGAGAAATCTTC 57.144 36.000 0.00 0.00 0.00 2.87
1673 1905 8.820153 AATGAGCCTTTTATGAGAGAAATCTT 57.180 30.769 0.00 0.00 0.00 2.40
1674 1906 8.820153 AAATGAGCCTTTTATGAGAGAAATCT 57.180 30.769 0.00 0.00 0.00 2.40
1687 1919 8.206189 CCACAATCCATAATAAATGAGCCTTTT 58.794 33.333 0.00 0.00 0.00 2.27
1688 1920 7.687592 GCCACAATCCATAATAAATGAGCCTTT 60.688 37.037 0.00 0.00 0.00 3.11
1689 1921 6.239402 GCCACAATCCATAATAAATGAGCCTT 60.239 38.462 0.00 0.00 0.00 4.35
1690 1922 5.244626 GCCACAATCCATAATAAATGAGCCT 59.755 40.000 0.00 0.00 0.00 4.58
1691 1923 5.473039 GCCACAATCCATAATAAATGAGCC 58.527 41.667 0.00 0.00 0.00 4.70
1692 1924 5.156355 CGCCACAATCCATAATAAATGAGC 58.844 41.667 0.00 0.00 0.00 4.26
1693 1925 5.156355 GCGCCACAATCCATAATAAATGAG 58.844 41.667 0.00 0.00 0.00 2.90
1694 1926 4.022416 GGCGCCACAATCCATAATAAATGA 60.022 41.667 24.80 0.00 0.00 2.57
1695 1927 4.236935 GGCGCCACAATCCATAATAAATG 58.763 43.478 24.80 0.00 0.00 2.32
1696 1928 3.894427 TGGCGCCACAATCCATAATAAAT 59.106 39.130 29.03 0.00 0.00 1.40
1697 1929 3.291584 TGGCGCCACAATCCATAATAAA 58.708 40.909 29.03 0.00 0.00 1.40
1698 1930 2.937519 TGGCGCCACAATCCATAATAA 58.062 42.857 29.03 0.00 0.00 1.40
1699 1931 2.647683 TGGCGCCACAATCCATAATA 57.352 45.000 29.03 0.00 0.00 0.98
1700 1932 1.774110 TTGGCGCCACAATCCATAAT 58.226 45.000 32.95 0.00 0.00 1.28
1701 1933 1.550327 TTTGGCGCCACAATCCATAA 58.450 45.000 32.95 15.94 0.00 1.90
1702 1934 1.774110 ATTTGGCGCCACAATCCATA 58.226 45.000 32.95 9.33 0.00 2.74
1703 1935 0.903942 AATTTGGCGCCACAATCCAT 59.096 45.000 32.95 13.81 0.00 3.41
1704 1936 0.037512 CAATTTGGCGCCACAATCCA 60.038 50.000 32.95 11.21 0.00 3.41
1705 1937 0.740516 CCAATTTGGCGCCACAATCC 60.741 55.000 32.95 0.00 0.00 3.01
1706 1938 0.246086 TCCAATTTGGCGCCACAATC 59.754 50.000 32.95 0.00 37.47 2.67
1707 1939 0.247185 CTCCAATTTGGCGCCACAAT 59.753 50.000 32.95 26.51 37.47 2.71
1708 1940 1.664873 CTCCAATTTGGCGCCACAA 59.335 52.632 32.95 25.50 37.47 3.33
1709 1941 2.929903 GCTCCAATTTGGCGCCACA 61.930 57.895 32.95 25.88 42.16 4.17
1710 1942 2.125952 GCTCCAATTTGGCGCCAC 60.126 61.111 32.95 11.73 42.16 5.01
1714 1946 2.182537 GGCAGCTCCAATTTGGCG 59.817 61.111 10.76 5.77 37.47 5.69
1715 1947 3.379880 TGGCAGCTCCAATTTGGC 58.620 55.556 10.76 0.04 43.21 4.52
1723 1955 1.180029 ACAAATGTGATGGCAGCTCC 58.820 50.000 3.69 0.00 0.00 4.70
1724 1956 2.357009 CCTACAAATGTGATGGCAGCTC 59.643 50.000 3.69 0.00 0.00 4.09
1725 1957 2.291153 ACCTACAAATGTGATGGCAGCT 60.291 45.455 3.69 0.00 0.00 4.24
1726 1958 2.094675 ACCTACAAATGTGATGGCAGC 58.905 47.619 0.00 0.00 0.00 5.25
1727 1959 4.789012 AAACCTACAAATGTGATGGCAG 57.211 40.909 0.00 0.00 0.00 4.85
1728 1960 6.127479 GGATAAAACCTACAAATGTGATGGCA 60.127 38.462 0.00 0.00 0.00 4.92
1729 1961 6.096846 AGGATAAAACCTACAAATGTGATGGC 59.903 38.462 0.00 0.00 38.65 4.40
1730 1962 7.645058 AGGATAAAACCTACAAATGTGATGG 57.355 36.000 0.00 0.00 38.65 3.51
1731 1963 8.522830 ACAAGGATAAAACCTACAAATGTGATG 58.477 33.333 0.00 0.00 39.62 3.07
1732 1964 8.650143 ACAAGGATAAAACCTACAAATGTGAT 57.350 30.769 0.00 0.00 39.62 3.06
1733 1965 8.472007 AACAAGGATAAAACCTACAAATGTGA 57.528 30.769 0.00 0.00 39.62 3.58
1734 1966 9.620660 GTAACAAGGATAAAACCTACAAATGTG 57.379 33.333 0.00 0.00 39.62 3.21
1735 1967 9.582648 AGTAACAAGGATAAAACCTACAAATGT 57.417 29.630 0.00 0.00 39.62 2.71
1740 1972 9.629878 TGAAAAGTAACAAGGATAAAACCTACA 57.370 29.630 0.00 0.00 39.62 2.74
1741 1973 9.888878 GTGAAAAGTAACAAGGATAAAACCTAC 57.111 33.333 0.00 0.00 39.62 3.18
1742 1974 8.776470 CGTGAAAAGTAACAAGGATAAAACCTA 58.224 33.333 0.00 0.00 39.62 3.08
1743 1975 7.499895 TCGTGAAAAGTAACAAGGATAAAACCT 59.500 33.333 0.00 0.00 42.69 3.50
1744 1976 7.588854 GTCGTGAAAAGTAACAAGGATAAAACC 59.411 37.037 0.00 0.00 0.00 3.27
1745 1977 7.319615 CGTCGTGAAAAGTAACAAGGATAAAAC 59.680 37.037 0.00 0.00 0.00 2.43
1746 1978 7.224362 TCGTCGTGAAAAGTAACAAGGATAAAA 59.776 33.333 0.00 0.00 0.00 1.52
1747 1979 6.700960 TCGTCGTGAAAAGTAACAAGGATAAA 59.299 34.615 0.00 0.00 0.00 1.40
1748 1980 6.215121 TCGTCGTGAAAAGTAACAAGGATAA 58.785 36.000 0.00 0.00 0.00 1.75
1749 1981 5.771469 TCGTCGTGAAAAGTAACAAGGATA 58.229 37.500 0.00 0.00 0.00 2.59
1763 1995 2.148916 AGTGCTTTCATCGTCGTGAA 57.851 45.000 6.27 6.27 36.38 3.18
1764 1996 1.792367 CAAGTGCTTTCATCGTCGTGA 59.208 47.619 0.00 0.00 0.00 4.35
1770 2002 6.142139 TGAATTGTAACAAGTGCTTTCATCG 58.858 36.000 0.00 0.00 0.00 3.84
1789 2021 2.485659 TCTGGGAGGCTCAGATGAATT 58.514 47.619 17.69 0.00 36.46 2.17
1876 2108 0.603569 ACAGACTACTGCCGGTTCAG 59.396 55.000 1.90 5.28 46.95 3.02
1899 2131 1.987306 TAGCAGCACATGGACCGGA 60.987 57.895 9.46 0.00 0.00 5.14
1917 2149 6.814954 AGATCCACTGGATTGTGTATAAGT 57.185 37.500 12.09 0.00 43.27 2.24
1948 2180 0.251341 GGTTGCAACATCAGGGAGGT 60.251 55.000 29.55 0.00 0.00 3.85
1988 2220 3.192422 TGGCAAATTATTCAGGGTCAACG 59.808 43.478 0.00 0.00 0.00 4.10
2055 2287 3.070576 GGCTGGGATGTTGTGGGC 61.071 66.667 0.00 0.00 0.00 5.36
2058 2290 1.870055 GCTGTGGCTGGGATGTTGTG 61.870 60.000 0.00 0.00 35.22 3.33
2077 2309 3.127721 TGCTATGAACAGACACTCGAGAG 59.872 47.826 21.68 14.72 0.00 3.20
2114 2346 8.211629 GTCAACATATCTGAATACTTTACCCCT 58.788 37.037 0.00 0.00 0.00 4.79
2126 2358 7.013178 TGCAAACTTTGAGTCAACATATCTGAA 59.987 33.333 4.68 0.00 0.00 3.02
2172 2427 5.683876 AGTGATATAACTGCAACCAGAGT 57.316 39.130 0.00 0.00 41.77 3.24
2173 2428 6.992063 AAAGTGATATAACTGCAACCAGAG 57.008 37.500 0.00 0.00 41.77 3.35
2174 2429 7.168219 AGAAAAGTGATATAACTGCAACCAGA 58.832 34.615 0.00 0.00 41.77 3.86
2177 2432 7.062255 GCAAAGAAAAGTGATATAACTGCAACC 59.938 37.037 0.00 0.00 0.00 3.77
2182 2437 8.948853 TTTCGCAAAGAAAAGTGATATAACTG 57.051 30.769 0.00 0.00 45.05 3.16
2198 2455 2.927477 TCCGTGCTACTATTTCGCAAAG 59.073 45.455 0.00 0.00 35.16 2.77
2210 2467 2.538939 GCATCCGAAATTTCCGTGCTAC 60.539 50.000 20.85 2.66 0.00 3.58
2221 2646 2.431419 TGCCAATCAATGCATCCGAAAT 59.569 40.909 0.00 0.00 31.31 2.17
2222 2647 1.823610 TGCCAATCAATGCATCCGAAA 59.176 42.857 0.00 0.00 31.31 3.46
2226 2651 2.273557 GTGTTGCCAATCAATGCATCC 58.726 47.619 0.00 0.00 37.33 3.51
2233 2658 4.081752 ACTTGAGTTTGTGTTGCCAATCAA 60.082 37.500 0.00 0.00 0.00 2.57
2276 2701 1.289530 TGTTCCCTTCCAAAACCCAGT 59.710 47.619 0.00 0.00 0.00 4.00
2298 2723 9.010366 GTTTTACTTTTATTTCATCGATGAGGC 57.990 33.333 25.95 2.24 38.19 4.70
2313 2738 9.584008 TCTACTCTCCTCTCAGTTTTACTTTTA 57.416 33.333 0.00 0.00 0.00 1.52
2316 2741 7.463431 TCTCTACTCTCCTCTCAGTTTTACTT 58.537 38.462 0.00 0.00 0.00 2.24
2317 2742 7.023171 TCTCTACTCTCCTCTCAGTTTTACT 57.977 40.000 0.00 0.00 0.00 2.24
2318 2743 7.690952 TTCTCTACTCTCCTCTCAGTTTTAC 57.309 40.000 0.00 0.00 0.00 2.01
2380 2807 2.439507 AGCAAAAGGAGACACTGAAGGA 59.560 45.455 0.00 0.00 0.00 3.36


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.