Multiple sequence alignment - TraesCS4A01G389600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G389600 chr4A 100.000 5386 0 0 1 5386 666979143 666984528 0.000000e+00 9947.0
1 TraesCS4A01G389600 chr4A 86.318 402 15 10 633 1018 667043981 667044358 8.400000e-108 401.0
2 TraesCS4A01G389600 chr4A 81.452 372 26 13 183 542 667037772 667038112 1.150000e-66 265.0
3 TraesCS4A01G389600 chr4A 82.895 152 8 12 360 497 331126446 331126593 2.630000e-23 121.0
4 TraesCS4A01G389600 chr4A 90.625 64 5 1 616 678 331126638 331126701 3.460000e-12 84.2
5 TraesCS4A01G389600 chr4A 100.000 40 0 0 571 610 667038111 667038150 2.080000e-09 75.0
6 TraesCS4A01G389600 chr7D 96.707 1974 64 1 3207 5180 53342848 53340876 0.000000e+00 3284.0
7 TraesCS4A01G389600 chr7D 91.497 2352 137 21 890 3208 53345284 53342963 0.000000e+00 3177.0
8 TraesCS4A01G389600 chr7D 87.165 522 33 17 241 742 53345794 53345287 3.640000e-156 562.0
9 TraesCS4A01G389600 chr7D 96.939 98 3 0 5289 5386 53340861 53340764 1.200000e-36 165.0
10 TraesCS4A01G389600 chr7D 93.056 72 4 1 183 254 53345885 53345815 2.650000e-18 104.0
11 TraesCS4A01G389600 chrUn 81.646 1956 331 23 3234 5174 75074564 75072622 0.000000e+00 1598.0
12 TraesCS4A01G389600 chrUn 79.103 2029 392 27 3217 5226 62149006 62151021 0.000000e+00 1369.0
13 TraesCS4A01G389600 chrUn 78.436 2161 386 51 3216 5348 294373635 294375743 0.000000e+00 1336.0
14 TraesCS4A01G389600 chrUn 78.107 1891 376 29 3283 5153 344888853 344890725 0.000000e+00 1164.0
15 TraesCS4A01G389600 chrUn 80.501 759 123 16 999 1740 331544489 331545239 4.710000e-155 558.0
16 TraesCS4A01G389600 chrUn 75.786 859 182 19 4309 5153 416541556 416542402 1.400000e-110 411.0
17 TraesCS4A01G389600 chrUn 80.847 496 93 2 999 1493 75399087 75399581 6.540000e-104 388.0
18 TraesCS4A01G389600 chr6D 80.204 1965 368 16 3217 5164 469917753 469919713 0.000000e+00 1454.0
19 TraesCS4A01G389600 chr6D 80.169 1780 322 22 3410 5168 469811632 469809863 0.000000e+00 1303.0
20 TraesCS4A01G389600 chr6D 79.899 791 151 6 999 1788 469940219 469939436 1.680000e-159 573.0
21 TraesCS4A01G389600 chr6B 79.804 1936 360 24 3235 5153 715838020 715836099 0.000000e+00 1380.0
22 TraesCS4A01G389600 chr6B 78.980 1941 376 24 3247 5164 715813639 715811708 0.000000e+00 1295.0
23 TraesCS4A01G389600 chr6B 78.629 1867 347 36 3217 5056 648359473 648361314 0.000000e+00 1190.0
24 TraesCS4A01G389600 chr6B 79.346 1651 300 26 3235 4854 715860642 715859002 0.000000e+00 1122.0
25 TraesCS4A01G389600 chr6B 80.674 1335 241 13 3235 4561 715778491 715777166 0.000000e+00 1020.0
26 TraesCS4A01G389600 chr6B 80.363 881 166 4 911 1788 716213339 716212463 0.000000e+00 662.0
27 TraesCS4A01G389600 chr6B 80.400 801 141 8 999 1788 715980264 715979469 3.590000e-166 595.0
28 TraesCS4A01G389600 chr6B 78.731 851 153 19 999 1826 716231968 716231123 1.320000e-150 544.0
29 TraesCS4A01G389600 chr6B 78.235 850 159 16 999 1826 715921194 715920349 6.180000e-144 521.0
30 TraesCS4A01G389600 chr6B 79.620 736 141 8 999 1731 716361948 716362677 2.220000e-143 520.0
31 TraesCS4A01G389600 chr6B 80.532 601 102 11 4576 5164 715848811 715848214 1.060000e-121 448.0
32 TraesCS4A01G389600 chr6A 79.812 852 143 18 999 1828 614795162 614794318 1.290000e-165 593.0
33 TraesCS4A01G389600 chr6A 79.015 853 157 12 999 1833 614678391 614677543 1.010000e-156 564.0
34 TraesCS4A01G389600 chr6A 78.689 854 160 12 999 1838 614784850 614784005 2.840000e-152 549.0
35 TraesCS4A01G389600 chr6A 79.206 428 87 2 999 1425 610597393 610596967 4.080000e-76 296.0
36 TraesCS4A01G389600 chr7A 96.296 324 10 2 5030 5353 54928751 54929072 1.030000e-146 531.0
37 TraesCS4A01G389600 chr5D 82.407 432 61 8 1001 1420 559927065 559926637 3.970000e-96 363.0
38 TraesCS4A01G389600 chr2A 85.864 191 9 12 360 535 28666560 28666373 2.560000e-43 187.0
39 TraesCS4A01G389600 chr2A 89.231 65 6 1 616 679 28666285 28666221 4.470000e-11 80.5
40 TraesCS4A01G389600 chr2D 84.293 191 22 6 467 653 120100276 120100090 4.290000e-41 180.0
41 TraesCS4A01G389600 chr2D 95.122 41 2 0 1 41 24711923 24711883 1.250000e-06 65.8
42 TraesCS4A01G389600 chr3B 84.375 192 11 13 360 535 781343667 781343855 2.580000e-38 171.0
43 TraesCS4A01G389600 chr3B 89.231 65 6 1 616 679 781343894 781343958 4.470000e-11 80.5
44 TraesCS4A01G389600 chr2B 76.689 296 51 12 5023 5314 748706922 748707203 1.210000e-31 148.0
45 TraesCS4A01G389600 chr3D 82.895 152 8 12 360 497 24896333 24896480 2.630000e-23 121.0
46 TraesCS4A01G389600 chr3D 93.750 48 3 0 632 679 24896542 24896589 7.480000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G389600 chr4A 666979143 666984528 5385 False 9947.0 9947 100.0000 1 5386 1 chr4A.!!$F1 5385
1 TraesCS4A01G389600 chr7D 53340764 53345885 5121 True 1458.4 3284 93.0728 183 5386 5 chr7D.!!$R1 5203
2 TraesCS4A01G389600 chrUn 75072622 75074564 1942 True 1598.0 1598 81.6460 3234 5174 1 chrUn.!!$R1 1940
3 TraesCS4A01G389600 chrUn 62149006 62151021 2015 False 1369.0 1369 79.1030 3217 5226 1 chrUn.!!$F1 2009
4 TraesCS4A01G389600 chrUn 294373635 294375743 2108 False 1336.0 1336 78.4360 3216 5348 1 chrUn.!!$F3 2132
5 TraesCS4A01G389600 chrUn 344888853 344890725 1872 False 1164.0 1164 78.1070 3283 5153 1 chrUn.!!$F5 1870
6 TraesCS4A01G389600 chrUn 331544489 331545239 750 False 558.0 558 80.5010 999 1740 1 chrUn.!!$F4 741
7 TraesCS4A01G389600 chrUn 416541556 416542402 846 False 411.0 411 75.7860 4309 5153 1 chrUn.!!$F6 844
8 TraesCS4A01G389600 chr6D 469917753 469919713 1960 False 1454.0 1454 80.2040 3217 5164 1 chr6D.!!$F1 1947
9 TraesCS4A01G389600 chr6D 469809863 469811632 1769 True 1303.0 1303 80.1690 3410 5168 1 chr6D.!!$R1 1758
10 TraesCS4A01G389600 chr6D 469939436 469940219 783 True 573.0 573 79.8990 999 1788 1 chr6D.!!$R2 789
11 TraesCS4A01G389600 chr6B 715836099 715838020 1921 True 1380.0 1380 79.8040 3235 5153 1 chr6B.!!$R3 1918
12 TraesCS4A01G389600 chr6B 715811708 715813639 1931 True 1295.0 1295 78.9800 3247 5164 1 chr6B.!!$R2 1917
13 TraesCS4A01G389600 chr6B 648359473 648361314 1841 False 1190.0 1190 78.6290 3217 5056 1 chr6B.!!$F1 1839
14 TraesCS4A01G389600 chr6B 715859002 715860642 1640 True 1122.0 1122 79.3460 3235 4854 1 chr6B.!!$R5 1619
15 TraesCS4A01G389600 chr6B 715777166 715778491 1325 True 1020.0 1020 80.6740 3235 4561 1 chr6B.!!$R1 1326
16 TraesCS4A01G389600 chr6B 716212463 716213339 876 True 662.0 662 80.3630 911 1788 1 chr6B.!!$R8 877
17 TraesCS4A01G389600 chr6B 715979469 715980264 795 True 595.0 595 80.4000 999 1788 1 chr6B.!!$R7 789
18 TraesCS4A01G389600 chr6B 716231123 716231968 845 True 544.0 544 78.7310 999 1826 1 chr6B.!!$R9 827
19 TraesCS4A01G389600 chr6B 715920349 715921194 845 True 521.0 521 78.2350 999 1826 1 chr6B.!!$R6 827
20 TraesCS4A01G389600 chr6B 716361948 716362677 729 False 520.0 520 79.6200 999 1731 1 chr6B.!!$F2 732
21 TraesCS4A01G389600 chr6B 715848214 715848811 597 True 448.0 448 80.5320 4576 5164 1 chr6B.!!$R4 588
22 TraesCS4A01G389600 chr6A 614794318 614795162 844 True 593.0 593 79.8120 999 1828 1 chr6A.!!$R4 829
23 TraesCS4A01G389600 chr6A 614677543 614678391 848 True 564.0 564 79.0150 999 1833 1 chr6A.!!$R2 834
24 TraesCS4A01G389600 chr6A 614784005 614784850 845 True 549.0 549 78.6890 999 1838 1 chr6A.!!$R3 839

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
826 875 0.106521 GCCCTGCTTCCATCTCTCTC 59.893 60.0 0.0 0.00 0.00 3.20 F
2174 2274 0.105964 CTTGGTTCGGGTCAGTGACA 59.894 55.0 24.2 1.39 33.68 3.58 F
2175 2275 0.179067 TTGGTTCGGGTCAGTGACAC 60.179 55.0 24.2 20.34 33.68 3.67 F
2259 2359 0.907230 TGGGGACACGGACATGATGA 60.907 55.0 0.0 0.00 33.40 2.92 F
2922 3053 0.930310 CAGGTTCACGTGATATGGCG 59.070 55.0 20.8 2.50 33.92 5.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2353 2453 0.804989 GGTGACTTGAAATGGAGCGG 59.195 55.000 0.00 0.00 0.00 5.52 R
3577 3830 1.141858 CTTGGTTCCATAGGCCCTCTC 59.858 57.143 0.00 0.00 0.00 3.20 R
3894 4147 4.629200 GTCATGAACTTGGCAACTCTCTAG 59.371 45.833 0.00 0.00 37.61 2.43 R
4026 4280 8.617290 TTTCCTTGATTAACTCCTTGTAGAAC 57.383 34.615 0.00 0.00 0.00 3.01 R
4460 4736 0.037046 CAGGAAGCCAAATGGTTGCC 60.037 55.000 5.17 5.17 44.04 4.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 5.940192 TGAACATTTTTGTGAGATACGCT 57.060 34.783 0.00 0.00 0.00 5.07
23 24 5.688823 TGAACATTTTTGTGAGATACGCTG 58.311 37.500 0.00 0.00 0.00 5.18
24 25 5.468409 TGAACATTTTTGTGAGATACGCTGA 59.532 36.000 0.00 0.00 0.00 4.26
25 26 5.940192 ACATTTTTGTGAGATACGCTGAA 57.060 34.783 0.00 0.00 0.00 3.02
26 27 6.500684 ACATTTTTGTGAGATACGCTGAAT 57.499 33.333 0.00 0.00 0.00 2.57
27 28 7.609760 ACATTTTTGTGAGATACGCTGAATA 57.390 32.000 0.00 0.00 0.00 1.75
28 29 8.039603 ACATTTTTGTGAGATACGCTGAATAA 57.960 30.769 0.00 0.00 0.00 1.40
29 30 8.677300 ACATTTTTGTGAGATACGCTGAATAAT 58.323 29.630 0.00 0.00 0.00 1.28
45 46 9.825972 CGCTGAATAATATTTAAATACAGGTGG 57.174 33.333 17.66 6.97 0.00 4.61
124 125 4.056092 TGCACATTGAGCATTTTTGTGA 57.944 36.364 4.56 0.00 39.98 3.58
125 126 4.633175 TGCACATTGAGCATTTTTGTGAT 58.367 34.783 4.56 0.00 39.98 3.06
126 127 5.057819 TGCACATTGAGCATTTTTGTGATT 58.942 33.333 4.56 0.00 39.98 2.57
127 128 6.221659 TGCACATTGAGCATTTTTGTGATTA 58.778 32.000 4.56 0.00 39.98 1.75
128 129 6.874664 TGCACATTGAGCATTTTTGTGATTAT 59.125 30.769 4.56 0.00 39.98 1.28
129 130 7.148557 TGCACATTGAGCATTTTTGTGATTATG 60.149 33.333 4.56 0.00 39.98 1.90
130 131 7.177407 CACATTGAGCATTTTTGTGATTATGC 58.823 34.615 0.00 0.00 42.76 3.14
131 132 6.035220 ACATTGAGCATTTTTGTGATTATGCG 59.965 34.615 0.00 0.00 46.00 4.73
132 133 5.058149 TGAGCATTTTTGTGATTATGCGT 57.942 34.783 0.00 0.00 46.00 5.24
133 134 5.468592 TGAGCATTTTTGTGATTATGCGTT 58.531 33.333 0.00 0.00 46.00 4.84
134 135 5.345472 TGAGCATTTTTGTGATTATGCGTTG 59.655 36.000 0.00 0.00 46.00 4.10
135 136 5.468592 AGCATTTTTGTGATTATGCGTTGA 58.531 33.333 0.00 0.00 46.00 3.18
136 137 5.925397 AGCATTTTTGTGATTATGCGTTGAA 59.075 32.000 0.00 0.00 46.00 2.69
137 138 6.008875 GCATTTTTGTGATTATGCGTTGAAC 58.991 36.000 0.00 0.00 34.70 3.18
138 139 6.346439 GCATTTTTGTGATTATGCGTTGAACA 60.346 34.615 0.00 0.00 34.70 3.18
139 140 7.562412 CATTTTTGTGATTATGCGTTGAACAA 58.438 30.769 0.00 0.00 0.00 2.83
140 141 7.706281 TTTTTGTGATTATGCGTTGAACAAT 57.294 28.000 0.00 0.00 0.00 2.71
141 142 8.803201 TTTTTGTGATTATGCGTTGAACAATA 57.197 26.923 0.00 0.00 0.00 1.90
142 143 8.978564 TTTTGTGATTATGCGTTGAACAATAT 57.021 26.923 0.00 0.00 0.00 1.28
143 144 8.978564 TTTGTGATTATGCGTTGAACAATATT 57.021 26.923 0.00 0.00 0.00 1.28
144 145 8.978564 TTGTGATTATGCGTTGAACAATATTT 57.021 26.923 0.00 0.00 0.00 1.40
154 155 9.395707 TGCGTTGAACAATATTTAAATTTACGT 57.604 25.926 5.91 0.00 0.00 3.57
161 162 8.989653 ACAATATTTAAATTTACGTTGTGGGG 57.010 30.769 5.91 0.00 0.00 4.96
162 163 8.804204 ACAATATTTAAATTTACGTTGTGGGGA 58.196 29.630 5.91 0.00 0.00 4.81
163 164 9.078753 CAATATTTAAATTTACGTTGTGGGGAC 57.921 33.333 5.91 0.00 0.00 4.46
164 165 6.651975 ATTTAAATTTACGTTGTGGGGACA 57.348 33.333 0.00 0.00 38.70 4.02
165 166 6.461110 TTTAAATTTACGTTGTGGGGACAA 57.539 33.333 0.00 0.00 46.06 3.18
166 167 6.651975 TTAAATTTACGTTGTGGGGACAAT 57.348 33.333 0.00 0.00 46.06 2.71
167 168 5.538849 AAATTTACGTTGTGGGGACAATT 57.461 34.783 0.00 0.00 46.06 2.32
168 169 4.776795 ATTTACGTTGTGGGGACAATTC 57.223 40.909 0.00 0.00 46.06 2.17
169 170 3.495434 TTACGTTGTGGGGACAATTCT 57.505 42.857 0.00 0.00 46.06 2.40
170 171 1.604604 ACGTTGTGGGGACAATTCTG 58.395 50.000 0.00 0.00 46.06 3.02
171 172 0.881118 CGTTGTGGGGACAATTCTGG 59.119 55.000 0.00 0.00 46.06 3.86
172 173 1.256812 GTTGTGGGGACAATTCTGGG 58.743 55.000 0.00 0.00 46.06 4.45
173 174 0.541764 TTGTGGGGACAATTCTGGGC 60.542 55.000 0.00 0.00 46.06 5.36
174 175 1.384191 GTGGGGACAATTCTGGGCT 59.616 57.895 0.00 0.00 46.06 5.19
175 176 0.967380 GTGGGGACAATTCTGGGCTG 60.967 60.000 0.00 0.00 46.06 4.85
176 177 1.384191 GGGGACAATTCTGGGCTGT 59.616 57.895 0.00 0.00 0.00 4.40
177 178 0.967380 GGGGACAATTCTGGGCTGTG 60.967 60.000 0.00 0.00 0.00 3.66
178 179 0.967380 GGGACAATTCTGGGCTGTGG 60.967 60.000 0.00 0.00 0.00 4.17
179 180 0.251341 GGACAATTCTGGGCTGTGGT 60.251 55.000 0.00 0.00 0.00 4.16
180 181 1.620822 GACAATTCTGGGCTGTGGTT 58.379 50.000 0.00 0.00 0.00 3.67
181 182 2.554344 GGACAATTCTGGGCTGTGGTTA 60.554 50.000 0.00 0.00 0.00 2.85
202 203 0.323360 TTGTGGCCCAGGTTAGATGC 60.323 55.000 0.00 0.00 0.00 3.91
212 213 3.244353 CCAGGTTAGATGCTGGATGTAGG 60.244 52.174 0.00 0.00 39.19 3.18
217 218 1.221523 AGATGCTGGATGTAGGGAGGA 59.778 52.381 0.00 0.00 0.00 3.71
218 219 1.622811 GATGCTGGATGTAGGGAGGAG 59.377 57.143 0.00 0.00 0.00 3.69
219 220 1.050988 TGCTGGATGTAGGGAGGAGC 61.051 60.000 0.00 0.00 0.00 4.70
220 221 1.763546 GCTGGATGTAGGGAGGAGCC 61.764 65.000 0.00 0.00 0.00 4.70
254 255 0.315251 TTCATAGGAGGATCAGCGCG 59.685 55.000 0.00 0.00 36.25 6.86
258 300 1.725557 TAGGAGGATCAGCGCGTGAC 61.726 60.000 8.43 5.54 38.28 3.67
290 332 2.608550 TTGACCCATCCCCGTTCCC 61.609 63.158 0.00 0.00 0.00 3.97
295 337 3.015145 CATCCCCGTTCCCCAGGT 61.015 66.667 0.00 0.00 0.00 4.00
329 372 1.227943 GTGACTGCTGCCACTTCCA 60.228 57.895 2.77 0.00 0.00 3.53
330 373 1.071987 TGACTGCTGCCACTTCCAG 59.928 57.895 0.00 0.00 0.00 3.86
332 375 2.403132 GACTGCTGCCACTTCCAGGT 62.403 60.000 0.00 0.00 0.00 4.00
333 376 1.673665 CTGCTGCCACTTCCAGGTC 60.674 63.158 0.00 0.00 0.00 3.85
334 377 2.121992 CTGCTGCCACTTCCAGGTCT 62.122 60.000 0.00 0.00 0.00 3.85
336 379 0.957888 GCTGCCACTTCCAGGTCTTC 60.958 60.000 0.00 0.00 0.00 2.87
337 380 0.689623 CTGCCACTTCCAGGTCTTCT 59.310 55.000 0.00 0.00 0.00 2.85
338 381 1.072965 CTGCCACTTCCAGGTCTTCTT 59.927 52.381 0.00 0.00 0.00 2.52
339 382 1.072331 TGCCACTTCCAGGTCTTCTTC 59.928 52.381 0.00 0.00 0.00 2.87
340 383 1.611936 GCCACTTCCAGGTCTTCTTCC 60.612 57.143 0.00 0.00 0.00 3.46
341 384 1.981495 CCACTTCCAGGTCTTCTTCCT 59.019 52.381 0.00 0.00 35.45 3.36
369 412 1.954362 CTCTCAACTGCTCCTCCCCG 61.954 65.000 0.00 0.00 0.00 5.73
370 413 2.203788 TCAACTGCTCCTCCCCGT 60.204 61.111 0.00 0.00 0.00 5.28
371 414 2.232298 CTCAACTGCTCCTCCCCGTC 62.232 65.000 0.00 0.00 0.00 4.79
402 445 0.929734 AGTCCCCTGCTACTCCCCTA 60.930 60.000 0.00 0.00 0.00 3.53
416 459 1.303282 CCCTAACCCCCTGAGCAAC 59.697 63.158 0.00 0.00 0.00 4.17
452 495 2.513738 CCCAATCTAGTCCCCAAATCCA 59.486 50.000 0.00 0.00 0.00 3.41
464 507 3.718956 CCCCAAATCCAGATCTCCTTACT 59.281 47.826 0.00 0.00 0.00 2.24
471 514 4.393834 TCCAGATCTCCTTACTCAGATCG 58.606 47.826 0.00 0.54 46.69 3.69
477 520 5.821516 TCTCCTTACTCAGATCGTTTCTC 57.178 43.478 0.00 0.00 29.93 2.87
497 540 2.031769 TCAAATCAAGCAGTCGCAAGTG 60.032 45.455 0.00 0.00 42.27 3.16
529 572 1.673337 CTGCAGGCTGTAGCTGCAA 60.673 57.895 19.61 12.26 46.29 4.08
544 587 0.893270 TGCAAATTCGTGAGGGGTGG 60.893 55.000 0.00 0.00 0.00 4.61
546 589 1.674322 AAATTCGTGAGGGGTGGCG 60.674 57.895 0.00 0.00 0.00 5.69
554 597 0.539986 TGAGGGGTGGCGATTTAGTC 59.460 55.000 0.00 0.00 0.00 2.59
561 606 3.335579 GGTGGCGATTTAGTCTTCAAGT 58.664 45.455 0.00 0.00 0.00 3.16
579 624 2.554636 TTGCAAGCTGGGAGCAACG 61.555 57.895 10.81 0.00 45.56 4.10
605 650 5.464168 TCGAAAAGCTACTGTAACAGGTAC 58.536 41.667 0.00 0.00 35.51 3.34
611 656 4.040376 GCTACTGTAACAGGTACGTATGC 58.960 47.826 0.00 0.61 35.51 3.14
614 659 3.184541 CTGTAACAGGTACGTATGCCAC 58.815 50.000 0.00 0.00 35.23 5.01
650 697 8.712285 AAAATTTGCCATTCTATCTTGACATG 57.288 30.769 0.00 0.00 0.00 3.21
679 728 6.569179 TGCAGACCACCTTTAATTCTTTAC 57.431 37.500 0.00 0.00 0.00 2.01
681 730 7.455058 TGCAGACCACCTTTAATTCTTTACTA 58.545 34.615 0.00 0.00 0.00 1.82
682 731 7.606456 TGCAGACCACCTTTAATTCTTTACTAG 59.394 37.037 0.00 0.00 0.00 2.57
683 732 7.606839 GCAGACCACCTTTAATTCTTTACTAGT 59.393 37.037 0.00 0.00 0.00 2.57
698 747 9.918630 TTCTTTACTAGTAGTTTAGATTGCGTT 57.081 29.630 8.40 0.00 0.00 4.84
699 748 9.565213 TCTTTACTAGTAGTTTAGATTGCGTTC 57.435 33.333 8.40 0.00 0.00 3.95
710 759 0.588252 ATTGCGTTCACTGACACTGC 59.412 50.000 0.00 0.00 0.00 4.40
723 772 1.439365 CACTGCGAAACAAGCGAGC 60.439 57.895 0.00 0.00 37.44 5.03
734 783 1.216122 CAAGCGAGCTGGATCTAAGC 58.784 55.000 11.59 11.59 41.15 3.09
750 799 4.192000 GCTGCTGCTAGCGAAGAA 57.808 55.556 15.95 1.14 46.26 2.52
751 800 2.460330 GCTGCTGCTAGCGAAGAAA 58.540 52.632 15.95 0.00 46.26 2.52
752 801 0.798776 GCTGCTGCTAGCGAAGAAAA 59.201 50.000 15.95 0.00 46.26 2.29
753 802 1.197721 GCTGCTGCTAGCGAAGAAAAA 59.802 47.619 15.95 0.00 46.26 1.94
770 819 2.009681 AAAATCCAGGTTCCACCACC 57.990 50.000 0.00 0.00 41.95 4.61
771 820 0.251165 AAATCCAGGTTCCACCACCG 60.251 55.000 0.00 0.00 41.95 4.94
772 821 2.137177 AATCCAGGTTCCACCACCGG 62.137 60.000 0.00 0.00 41.95 5.28
773 822 3.246112 CCAGGTTCCACCACCGGA 61.246 66.667 9.46 0.00 41.95 5.14
774 823 2.602676 CCAGGTTCCACCACCGGAT 61.603 63.158 9.46 0.00 41.95 4.18
775 824 1.078426 CAGGTTCCACCACCGGATC 60.078 63.158 9.46 0.00 41.95 3.36
776 825 2.271173 GGTTCCACCACCGGATCC 59.729 66.667 9.46 0.00 38.42 3.36
777 826 2.271173 GTTCCACCACCGGATCCC 59.729 66.667 9.46 0.00 34.19 3.85
778 827 3.012722 TTCCACCACCGGATCCCC 61.013 66.667 9.46 0.00 34.19 4.81
791 840 1.271656 GGATCCCCGTCAATAGGTACG 59.728 57.143 0.00 0.00 38.80 3.67
792 841 2.233271 GATCCCCGTCAATAGGTACGA 58.767 52.381 0.00 0.00 41.55 3.43
793 842 1.392589 TCCCCGTCAATAGGTACGAC 58.607 55.000 0.00 0.00 41.55 4.34
794 843 0.386838 CCCCGTCAATAGGTACGACC 59.613 60.000 0.00 0.00 41.55 4.79
795 844 0.386838 CCCGTCAATAGGTACGACCC 59.613 60.000 0.00 0.00 39.75 4.46
796 845 0.386838 CCGTCAATAGGTACGACCCC 59.613 60.000 0.00 0.00 39.75 4.95
797 846 1.105457 CGTCAATAGGTACGACCCCA 58.895 55.000 0.00 0.00 39.75 4.96
798 847 1.684983 CGTCAATAGGTACGACCCCAT 59.315 52.381 0.00 0.00 39.75 4.00
799 848 2.288030 CGTCAATAGGTACGACCCCATC 60.288 54.545 0.00 0.00 39.75 3.51
800 849 2.963782 GTCAATAGGTACGACCCCATCT 59.036 50.000 0.00 0.00 39.75 2.90
801 850 2.963101 TCAATAGGTACGACCCCATCTG 59.037 50.000 0.00 0.00 39.75 2.90
802 851 1.339097 ATAGGTACGACCCCATCTGC 58.661 55.000 0.00 0.00 39.75 4.26
803 852 0.260816 TAGGTACGACCCCATCTGCT 59.739 55.000 0.00 0.00 39.75 4.24
804 853 1.043673 AGGTACGACCCCATCTGCTC 61.044 60.000 0.00 0.00 39.75 4.26
805 854 1.442148 GTACGACCCCATCTGCTCC 59.558 63.158 0.00 0.00 0.00 4.70
806 855 1.043673 GTACGACCCCATCTGCTCCT 61.044 60.000 0.00 0.00 0.00 3.69
807 856 1.043116 TACGACCCCATCTGCTCCTG 61.043 60.000 0.00 0.00 0.00 3.86
808 857 2.191641 GACCCCATCTGCTCCTGC 59.808 66.667 0.00 0.00 40.20 4.85
809 858 3.412624 GACCCCATCTGCTCCTGCC 62.413 68.421 0.00 0.00 38.71 4.85
810 859 4.201122 CCCCATCTGCTCCTGCCC 62.201 72.222 0.00 0.00 38.71 5.36
811 860 3.095163 CCCATCTGCTCCTGCCCT 61.095 66.667 0.00 0.00 38.71 5.19
812 861 2.192443 CCATCTGCTCCTGCCCTG 59.808 66.667 0.00 0.00 38.71 4.45
813 862 2.516460 CATCTGCTCCTGCCCTGC 60.516 66.667 0.00 0.00 38.71 4.85
814 863 2.691623 ATCTGCTCCTGCCCTGCT 60.692 61.111 0.00 0.00 38.71 4.24
815 864 2.307162 ATCTGCTCCTGCCCTGCTT 61.307 57.895 0.00 0.00 38.71 3.91
816 865 2.268167 ATCTGCTCCTGCCCTGCTTC 62.268 60.000 0.00 0.00 38.71 3.86
817 866 3.991725 CTGCTCCTGCCCTGCTTCC 62.992 68.421 0.00 0.00 38.71 3.46
818 867 4.039092 GCTCCTGCCCTGCTTCCA 62.039 66.667 0.00 0.00 0.00 3.53
819 868 3.004951 CTCCTGCCCTGCTTCCAT 58.995 61.111 0.00 0.00 0.00 3.41
820 869 1.153005 CTCCTGCCCTGCTTCCATC 60.153 63.158 0.00 0.00 0.00 3.51
821 870 1.617536 TCCTGCCCTGCTTCCATCT 60.618 57.895 0.00 0.00 0.00 2.90
822 871 1.153005 CCTGCCCTGCTTCCATCTC 60.153 63.158 0.00 0.00 0.00 2.75
823 872 1.633915 CCTGCCCTGCTTCCATCTCT 61.634 60.000 0.00 0.00 0.00 3.10
824 873 0.179051 CTGCCCTGCTTCCATCTCTC 60.179 60.000 0.00 0.00 0.00 3.20
825 874 0.619832 TGCCCTGCTTCCATCTCTCT 60.620 55.000 0.00 0.00 0.00 3.10
826 875 0.106521 GCCCTGCTTCCATCTCTCTC 59.893 60.000 0.00 0.00 0.00 3.20
827 876 0.388659 CCCTGCTTCCATCTCTCTCG 59.611 60.000 0.00 0.00 0.00 4.04
828 877 1.110442 CCTGCTTCCATCTCTCTCGT 58.890 55.000 0.00 0.00 0.00 4.18
829 878 2.302260 CCTGCTTCCATCTCTCTCGTA 58.698 52.381 0.00 0.00 0.00 3.43
830 879 2.890311 CCTGCTTCCATCTCTCTCGTAT 59.110 50.000 0.00 0.00 0.00 3.06
831 880 3.305267 CCTGCTTCCATCTCTCTCGTATG 60.305 52.174 0.00 0.00 0.00 2.39
832 881 2.035193 TGCTTCCATCTCTCTCGTATGC 59.965 50.000 0.00 0.00 0.00 3.14
833 882 2.295909 GCTTCCATCTCTCTCGTATGCT 59.704 50.000 0.00 0.00 0.00 3.79
834 883 3.856638 GCTTCCATCTCTCTCGTATGCTG 60.857 52.174 0.00 0.00 0.00 4.41
835 884 1.611006 TCCATCTCTCTCGTATGCTGC 59.389 52.381 0.00 0.00 0.00 5.25
836 885 1.336702 CCATCTCTCTCGTATGCTGCC 60.337 57.143 0.00 0.00 0.00 4.85
837 886 0.595588 ATCTCTCTCGTATGCTGCCG 59.404 55.000 0.00 0.00 0.00 5.69
838 887 1.007964 CTCTCTCGTATGCTGCCGG 60.008 63.158 0.00 0.00 0.00 6.13
839 888 2.659897 CTCTCGTATGCTGCCGGC 60.660 66.667 22.73 22.73 42.22 6.13
840 889 3.144120 CTCTCGTATGCTGCCGGCT 62.144 63.158 29.70 9.99 42.39 5.52
841 890 2.963854 CTCGTATGCTGCCGGCTG 60.964 66.667 29.70 28.47 42.39 4.85
842 891 4.529219 TCGTATGCTGCCGGCTGG 62.529 66.667 31.28 22.57 42.39 4.85
854 903 2.750237 GGCTGGGCCGGTTTGTAG 60.750 66.667 15.16 0.00 39.62 2.74
855 904 3.440415 GCTGGGCCGGTTTGTAGC 61.440 66.667 15.16 3.88 0.00 3.58
856 905 2.351276 CTGGGCCGGTTTGTAGCT 59.649 61.111 3.48 0.00 0.00 3.32
857 906 1.303317 CTGGGCCGGTTTGTAGCTT 60.303 57.895 3.48 0.00 0.00 3.74
858 907 0.893727 CTGGGCCGGTTTGTAGCTTT 60.894 55.000 3.48 0.00 0.00 3.51
859 908 0.468400 TGGGCCGGTTTGTAGCTTTT 60.468 50.000 1.90 0.00 0.00 2.27
860 909 0.242825 GGGCCGGTTTGTAGCTTTTC 59.757 55.000 1.90 0.00 0.00 2.29
861 910 0.242825 GGCCGGTTTGTAGCTTTTCC 59.757 55.000 1.90 0.00 0.00 3.13
862 911 0.955905 GCCGGTTTGTAGCTTTTCCA 59.044 50.000 1.90 0.00 0.00 3.53
863 912 1.068541 GCCGGTTTGTAGCTTTTCCAG 60.069 52.381 1.90 0.00 0.00 3.86
864 913 2.227194 CCGGTTTGTAGCTTTTCCAGT 58.773 47.619 0.00 0.00 0.00 4.00
865 914 2.031157 CCGGTTTGTAGCTTTTCCAGTG 60.031 50.000 0.00 0.00 0.00 3.66
866 915 2.604614 CGGTTTGTAGCTTTTCCAGTGC 60.605 50.000 0.00 0.00 0.00 4.40
867 916 2.360801 GGTTTGTAGCTTTTCCAGTGCA 59.639 45.455 0.00 0.00 0.00 4.57
868 917 3.550842 GGTTTGTAGCTTTTCCAGTGCAG 60.551 47.826 0.00 0.00 0.00 4.41
869 918 2.638480 TGTAGCTTTTCCAGTGCAGT 57.362 45.000 0.00 0.00 0.00 4.40
870 919 3.762407 TGTAGCTTTTCCAGTGCAGTA 57.238 42.857 0.00 0.00 0.00 2.74
871 920 4.079980 TGTAGCTTTTCCAGTGCAGTAA 57.920 40.909 0.00 0.00 0.00 2.24
872 921 4.651778 TGTAGCTTTTCCAGTGCAGTAAT 58.348 39.130 0.00 0.00 0.00 1.89
873 922 5.800296 TGTAGCTTTTCCAGTGCAGTAATA 58.200 37.500 0.00 0.00 0.00 0.98
874 923 5.642063 TGTAGCTTTTCCAGTGCAGTAATAC 59.358 40.000 0.00 0.00 0.00 1.89
875 924 4.911390 AGCTTTTCCAGTGCAGTAATACT 58.089 39.130 0.00 0.00 0.00 2.12
876 925 5.316987 AGCTTTTCCAGTGCAGTAATACTT 58.683 37.500 0.00 0.00 0.00 2.24
877 926 5.182001 AGCTTTTCCAGTGCAGTAATACTTG 59.818 40.000 0.00 0.00 0.00 3.16
878 927 5.619981 GCTTTTCCAGTGCAGTAATACTTGG 60.620 44.000 0.00 3.13 0.00 3.61
879 928 3.627395 TCCAGTGCAGTAATACTTGGG 57.373 47.619 8.52 0.00 0.00 4.12
880 929 2.017049 CCAGTGCAGTAATACTTGGGC 58.983 52.381 0.00 0.00 0.00 5.36
881 930 2.356125 CCAGTGCAGTAATACTTGGGCT 60.356 50.000 0.00 0.00 0.00 5.19
882 931 3.347216 CAGTGCAGTAATACTTGGGCTT 58.653 45.455 0.00 0.00 0.00 4.35
883 932 4.513442 CAGTGCAGTAATACTTGGGCTTA 58.487 43.478 0.00 0.00 0.00 3.09
884 933 4.332819 CAGTGCAGTAATACTTGGGCTTAC 59.667 45.833 0.00 0.00 0.00 2.34
885 934 4.225267 AGTGCAGTAATACTTGGGCTTACT 59.775 41.667 0.00 0.00 36.41 2.24
886 935 4.571176 GTGCAGTAATACTTGGGCTTACTC 59.429 45.833 0.00 0.00 34.35 2.59
887 936 4.127907 GCAGTAATACTTGGGCTTACTCC 58.872 47.826 0.00 0.00 34.35 3.85
888 937 4.369182 CAGTAATACTTGGGCTTACTCCG 58.631 47.826 0.00 0.00 34.35 4.63
906 955 9.331282 CTTACTCCGATTAATCCTTCTTTTCAT 57.669 33.333 9.87 0.00 0.00 2.57
951 1003 0.510359 GCTGTTCGCTGTCAGTTCAG 59.490 55.000 0.93 6.54 38.35 3.02
972 1024 2.203451 ACGACCTGACCTCCACGT 60.203 61.111 0.00 0.00 0.00 4.49
995 1048 1.830587 ATTGACAGGGCGAGCACAGA 61.831 55.000 0.00 0.00 0.00 3.41
997 1050 4.385405 ACAGGGCGAGCACAGAGC 62.385 66.667 0.00 0.00 46.19 4.09
1291 1344 3.890756 AGATGACAATGACACAAAGCCAA 59.109 39.130 0.00 0.00 0.00 4.52
1364 1426 1.207089 TCGGATTGCAAACGAGATCCT 59.793 47.619 21.03 0.00 36.70 3.24
1506 1589 1.202222 GCCTCAATGCTCGTTGGAATG 60.202 52.381 2.40 0.00 0.00 2.67
1563 1646 2.141517 GAAGAGGATGGATGTGCATCG 58.858 52.381 8.16 0.00 38.69 3.84
1710 1808 4.393062 GTGTCACGAAATCCAGACATCATT 59.607 41.667 0.00 0.00 42.28 2.57
1751 1849 0.250597 GGTGAAGTTACCGGGCAACT 60.251 55.000 15.77 15.77 37.85 3.16
1761 1859 3.926058 ACCGGGCAACTTTATACTGAT 57.074 42.857 6.32 0.00 0.00 2.90
1769 1867 6.483640 GGGCAACTTTATACTGATACAGAAGG 59.516 42.308 5.76 0.00 35.18 3.46
1821 1919 4.957296 TCTCCAACTTCCTTGTAGACAAC 58.043 43.478 0.00 0.00 0.00 3.32
1840 1938 6.159046 AGACAACAGGTACTATCTCTACTCCT 59.841 42.308 0.00 0.00 36.02 3.69
1841 1939 6.733509 ACAACAGGTACTATCTCTACTCCTT 58.266 40.000 0.00 0.00 36.02 3.36
2052 2150 5.842907 TGGTGAGACCTTGTGATTATATCG 58.157 41.667 0.00 0.00 39.58 2.92
2072 2170 5.677319 TCGACAACCAATCCTAAGAATCT 57.323 39.130 0.00 0.00 0.00 2.40
2074 2172 6.106673 TCGACAACCAATCCTAAGAATCTTC 58.893 40.000 0.00 0.00 0.00 2.87
2083 2183 8.001292 CCAATCCTAAGAATCTTCCCTAATTGT 58.999 37.037 0.00 0.00 0.00 2.71
2119 2219 8.579850 TGACATAGCCACTCAATTTTTAATCT 57.420 30.769 0.00 0.00 0.00 2.40
2121 2221 8.000780 ACATAGCCACTCAATTTTTAATCTCC 57.999 34.615 0.00 0.00 0.00 3.71
2131 2231 9.798994 CTCAATTTTTAATCTCCTGATCTTTGG 57.201 33.333 0.00 0.00 31.51 3.28
2149 2249 0.458889 GGATTTGCATGCACGCACAT 60.459 50.000 22.58 6.51 42.87 3.21
2163 2263 1.202065 CGCACATGGATTCTTGGTTCG 60.202 52.381 0.00 0.00 0.00 3.95
2174 2274 0.105964 CTTGGTTCGGGTCAGTGACA 59.894 55.000 24.20 1.39 33.68 3.58
2175 2275 0.179067 TTGGTTCGGGTCAGTGACAC 60.179 55.000 24.20 20.34 33.68 3.67
2176 2276 1.046472 TGGTTCGGGTCAGTGACACT 61.046 55.000 22.76 1.07 33.17 3.55
2257 2357 4.145436 TGGGGACACGGACATGAT 57.855 55.556 0.00 0.00 33.40 2.45
2258 2358 1.601703 TGGGGACACGGACATGATG 59.398 57.895 0.00 0.00 33.40 3.07
2259 2359 0.907230 TGGGGACACGGACATGATGA 60.907 55.000 0.00 0.00 33.40 2.92
2266 2366 5.510690 GGGACACGGACATGATGATACATAA 60.511 44.000 0.00 0.00 0.00 1.90
2283 2383 5.894298 ACATAATCTCCCATAAGCTGTCA 57.106 39.130 0.00 0.00 0.00 3.58
2333 2433 8.137437 CCCAGTTGAGTATTAATATGCCTTTTG 58.863 37.037 0.00 0.00 0.00 2.44
2334 2434 8.686334 CCAGTTGAGTATTAATATGCCTTTTGT 58.314 33.333 0.00 0.00 0.00 2.83
2365 2466 2.198827 AACATGACCGCTCCATTTCA 57.801 45.000 0.00 0.00 0.00 2.69
2414 2515 2.541794 CGATCGTCACGTCTTGATCCAT 60.542 50.000 7.03 0.00 36.32 3.41
2415 2516 2.561733 TCGTCACGTCTTGATCCATC 57.438 50.000 0.00 0.00 36.32 3.51
2416 2517 1.816224 TCGTCACGTCTTGATCCATCA 59.184 47.619 0.00 0.00 36.32 3.07
2417 2518 2.427095 TCGTCACGTCTTGATCCATCAT 59.573 45.455 0.00 0.00 36.32 2.45
2418 2519 2.791560 CGTCACGTCTTGATCCATCATC 59.208 50.000 0.00 0.00 36.32 2.92
2419 2520 3.126831 GTCACGTCTTGATCCATCATCC 58.873 50.000 0.00 0.00 36.32 3.51
2420 2521 2.765699 TCACGTCTTGATCCATCATCCA 59.234 45.455 0.00 0.00 36.56 3.41
2461 2562 9.739276 ATATATTCTCTCTGGTCTCTAGAAGTG 57.261 37.037 0.00 0.00 30.30 3.16
2508 2611 7.497925 ACTTTCAAAACTCTGACTACCAATC 57.502 36.000 0.00 0.00 0.00 2.67
2516 2619 9.495572 AAAACTCTGACTACCAATCTCTTTTAG 57.504 33.333 0.00 0.00 0.00 1.85
2518 2621 8.423906 ACTCTGACTACCAATCTCTTTTAGAA 57.576 34.615 0.00 0.00 37.89 2.10
2656 2759 6.291648 TGGATAATGTGCCAATGCTAAAAA 57.708 33.333 0.00 0.00 38.71 1.94
2659 2762 6.762661 GGATAATGTGCCAATGCTAAAAATGT 59.237 34.615 0.00 0.00 38.71 2.71
2662 2765 4.701765 TGTGCCAATGCTAAAAATGTTGT 58.298 34.783 0.00 0.00 38.71 3.32
2664 2767 4.990426 GTGCCAATGCTAAAAATGTTGTCT 59.010 37.500 0.00 0.00 38.71 3.41
2720 2823 6.045072 ACTTTCCCATCTTAATCGTGTACA 57.955 37.500 0.00 0.00 0.00 2.90
2790 2894 2.771089 AGCTCATGAATGTCGTGTGTT 58.229 42.857 0.00 0.00 35.03 3.32
2808 2912 6.809689 CGTGTGTTATAGAACATGTGAACCTA 59.190 38.462 6.16 0.00 46.98 3.08
2814 2918 9.216117 GTTATAGAACATGTGAACCTACAAACT 57.784 33.333 0.00 0.00 35.48 2.66
2834 2965 9.225436 ACAAACTTTCTTTTAAAAATTCCTGCA 57.775 25.926 1.66 0.00 0.00 4.41
2842 2973 9.651913 TCTTTTAAAAATTCCTGCATTATGACC 57.348 29.630 1.66 0.00 0.00 4.02
2865 2996 7.901029 ACCCCAAAATTTTCATTGTTTTTGTT 58.099 26.923 0.00 0.00 37.36 2.83
2912 3043 9.781834 TTTTAGATAAAATTATGCAGGTTCACG 57.218 29.630 0.00 0.00 30.83 4.35
2915 3046 6.597672 AGATAAAATTATGCAGGTTCACGTGA 59.402 34.615 15.76 15.76 33.92 4.35
2922 3053 0.930310 CAGGTTCACGTGATATGGCG 59.070 55.000 20.80 2.50 33.92 5.69
2930 3061 2.863740 CACGTGATATGGCGTACACAAT 59.136 45.455 10.90 0.00 39.48 2.71
3010 3141 4.378874 GCTTGCGCTCTTGAGAGTAAAAAT 60.379 41.667 9.73 0.00 43.85 1.82
3021 3152 8.820933 TCTTGAGAGTAAAAATGAGCAATATCG 58.179 33.333 0.00 0.00 0.00 2.92
3026 3157 7.011482 AGAGTAAAAATGAGCAATATCGTGGTC 59.989 37.037 0.53 0.53 44.52 4.02
3027 3158 6.823689 AGTAAAAATGAGCAATATCGTGGTCT 59.176 34.615 7.82 0.00 44.56 3.85
3028 3159 6.515272 AAAAATGAGCAATATCGTGGTCTT 57.485 33.333 7.82 0.18 44.56 3.01
3047 3178 6.155221 TGGTCTTTTATCTCTATGCTCTGTGT 59.845 38.462 0.00 0.00 0.00 3.72
3058 3189 9.967346 TCTCTATGCTCTGTGTAATTAATGTAC 57.033 33.333 0.00 0.00 0.00 2.90
3064 3195 9.019656 TGCTCTGTGTAATTAATGTACCAAATT 57.980 29.630 0.00 0.00 0.00 1.82
3091 3222 8.634444 AGCTTCTATTATTGTATCAGTCGAGTT 58.366 33.333 0.00 0.00 0.00 3.01
3092 3223 9.894783 GCTTCTATTATTGTATCAGTCGAGTTA 57.105 33.333 0.00 0.00 0.00 2.24
3135 3266 2.095567 CCCGTGTCAGCTTTCTCATTTG 60.096 50.000 0.00 0.00 0.00 2.32
3138 3269 3.248363 CGTGTCAGCTTTCTCATTTGTCA 59.752 43.478 0.00 0.00 0.00 3.58
3175 3306 3.694566 ACGAGAAAACAAGTGCTCCTTTT 59.305 39.130 0.00 0.00 0.00 2.27
3202 3333 6.479095 TTTCTTTTTCTTTTGGTGCTTGTG 57.521 33.333 0.00 0.00 0.00 3.33
3208 3339 6.588719 TTTCTTTTGGTGCTTGTGCTATAT 57.411 33.333 0.00 0.00 40.48 0.86
3209 3340 7.695480 TTTCTTTTGGTGCTTGTGCTATATA 57.305 32.000 0.00 0.00 40.48 0.86
3210 3341 7.695480 TTCTTTTGGTGCTTGTGCTATATAA 57.305 32.000 0.00 0.00 40.48 0.98
3211 3342 7.695480 TCTTTTGGTGCTTGTGCTATATAAA 57.305 32.000 0.00 0.00 40.48 1.40
3279 3529 6.257849 TGTTGTTGACGATATATGGAAGAAGC 59.742 38.462 1.28 0.00 0.00 3.86
3375 3628 5.980698 AGATGTCGCTAATTCATGTCAAG 57.019 39.130 0.00 0.00 0.00 3.02
3462 3715 5.988310 TCACGGAAGACTATTTAACTCCA 57.012 39.130 0.00 0.00 0.00 3.86
3569 3822 1.944024 TCTGGTTTGTTGGCTAACACG 59.056 47.619 15.94 2.55 45.91 4.49
3577 3830 2.875933 TGTTGGCTAACACGGAAAGAAG 59.124 45.455 12.09 0.00 41.66 2.85
3689 3942 6.599244 CACTTAGTTATTTTGATCTGCCTCCA 59.401 38.462 0.00 0.00 0.00 3.86
3894 4147 5.221126 GGGAAGACAAATGAATATGGTGAGC 60.221 44.000 0.00 0.00 0.00 4.26
4242 4496 1.134788 CCCAGCTAAGGTACCTGAACG 60.135 57.143 17.14 5.43 0.00 3.95
4290 4544 2.226912 CCAGAACAAATCGGGCGTTTAA 59.773 45.455 0.00 0.00 36.56 1.52
4340 4594 5.547465 CACACTTGTGTAGAGGAATTACCA 58.453 41.667 6.06 0.00 40.96 3.25
4347 4601 5.053145 GTGTAGAGGAATTACCAGCATCTG 58.947 45.833 0.00 0.00 42.04 2.90
4458 4734 4.349342 ACATTGAAAGAGGTCAGGTTCTCT 59.651 41.667 0.00 0.00 41.63 3.10
4460 4736 5.730296 TTGAAAGAGGTCAGGTTCTCTAG 57.270 43.478 0.00 0.00 39.22 2.43
4556 4838 5.357314 TCGAAGAGTATTCTGACACTAAGGG 59.643 44.000 0.00 0.00 32.79 3.95
4574 4856 7.067008 CACTAAGGGTACAAATATGGTTGAAGG 59.933 40.741 0.00 0.00 32.59 3.46
4764 5067 0.251634 GCTCCCTCAGAAACCTCCAG 59.748 60.000 0.00 0.00 0.00 3.86
5056 5368 2.294078 AAGAACCTCCCCTGCCTCG 61.294 63.158 0.00 0.00 0.00 4.63
5057 5369 2.683933 GAACCTCCCCTGCCTCGA 60.684 66.667 0.00 0.00 0.00 4.04
5098 5413 4.955925 AATGACGACGATGGCATTTTTA 57.044 36.364 0.00 0.00 0.00 1.52
5177 5492 8.159344 AGTTTACTCTTTTGGAAAGATGTCAG 57.841 34.615 3.81 0.00 0.00 3.51
5180 5495 8.924511 TTACTCTTTTGGAAAGATGTCAGATT 57.075 30.769 3.81 0.00 0.00 2.40
5182 5497 8.242729 ACTCTTTTGGAAAGATGTCAGATTTT 57.757 30.769 3.81 0.00 0.00 1.82
5183 5498 9.354673 ACTCTTTTGGAAAGATGTCAGATTTTA 57.645 29.630 3.81 0.00 0.00 1.52
5191 5506 9.565213 GGAAAGATGTCAGATTTTATTTGTCTG 57.435 33.333 0.00 0.00 40.48 3.51
5192 5507 9.565213 GAAAGATGTCAGATTTTATTTGTCTGG 57.435 33.333 0.00 0.00 39.77 3.86
5195 5510 8.954350 AGATGTCAGATTTTATTTGTCTGGAAG 58.046 33.333 0.00 0.00 39.77 3.46
5219 5534 3.259123 CCCAGCTTTGATTAAACAAGCCT 59.741 43.478 11.18 4.38 0.00 4.58
5233 5548 2.076863 CAAGCCTAAGAACCAGGAACG 58.923 52.381 0.00 0.00 34.91 3.95
5245 5560 3.647771 GGAACGGGGGAGTTGCCT 61.648 66.667 0.00 0.00 36.62 4.75
5248 5563 2.523453 GAACGGGGGAGTTGCCTCTC 62.523 65.000 0.00 0.00 37.29 3.20
5256 5571 0.103937 GAGTTGCCTCTCCTCATCCG 59.896 60.000 0.00 0.00 34.69 4.18
5257 5572 1.144936 GTTGCCTCTCCTCATCCGG 59.855 63.158 0.00 0.00 0.00 5.14
5258 5573 2.735772 TTGCCTCTCCTCATCCGGC 61.736 63.158 0.00 0.00 41.06 6.13
5259 5574 3.934962 GCCTCTCCTCATCCGGCC 61.935 72.222 0.00 0.00 34.75 6.13
5260 5575 2.444706 CCTCTCCTCATCCGGCCA 60.445 66.667 2.24 0.00 0.00 5.36
5261 5576 2.506061 CCTCTCCTCATCCGGCCAG 61.506 68.421 2.24 0.00 0.00 4.85
5263 5578 4.247380 CTCCTCATCCGGCCAGCC 62.247 72.222 2.24 0.00 0.00 4.85
5281 5599 5.334414 GCCAGCCGATTATCATGTTTAAGAG 60.334 44.000 0.00 0.00 0.00 2.85
5283 5601 6.929049 CCAGCCGATTATCATGTTTAAGAGTA 59.071 38.462 0.00 0.00 0.00 2.59
5284 5602 7.604164 CCAGCCGATTATCATGTTTAAGAGTAT 59.396 37.037 0.00 0.00 0.00 2.12
5286 5604 9.209175 AGCCGATTATCATGTTTAAGAGTATTC 57.791 33.333 0.00 0.00 0.00 1.75
5320 5638 3.005897 TCTCTCCTTTATGATACGCCAGC 59.994 47.826 0.00 0.00 0.00 4.85
5326 5644 2.979814 TATGATACGCCAGCACACTT 57.020 45.000 0.00 0.00 0.00 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.468409 TCAGCGTATCTCACAAAAATGTTCA 59.532 36.000 0.00 0.00 0.00 3.18
1 2 5.927030 TCAGCGTATCTCACAAAAATGTTC 58.073 37.500 0.00 0.00 0.00 3.18
2 3 5.940192 TCAGCGTATCTCACAAAAATGTT 57.060 34.783 0.00 0.00 0.00 2.71
3 4 5.940192 TTCAGCGTATCTCACAAAAATGT 57.060 34.783 0.00 0.00 0.00 2.71
19 20 9.825972 CCACCTGTATTTAAATATTATTCAGCG 57.174 33.333 11.00 9.24 0.00 5.18
103 104 4.056092 TCACAAAAATGCTCAATGTGCA 57.944 36.364 12.50 12.50 44.95 4.57
104 105 5.600908 AATCACAAAAATGCTCAATGTGC 57.399 34.783 0.00 0.00 40.80 4.57
105 106 7.177407 GCATAATCACAAAAATGCTCAATGTG 58.823 34.615 0.00 0.00 41.16 3.21
106 107 6.035220 CGCATAATCACAAAAATGCTCAATGT 59.965 34.615 4.81 0.00 41.98 2.71
107 108 6.035220 ACGCATAATCACAAAAATGCTCAATG 59.965 34.615 4.81 0.00 41.98 2.82
108 109 6.101332 ACGCATAATCACAAAAATGCTCAAT 58.899 32.000 4.81 0.00 41.98 2.57
109 110 5.468592 ACGCATAATCACAAAAATGCTCAA 58.531 33.333 4.81 0.00 41.98 3.02
110 111 5.058149 ACGCATAATCACAAAAATGCTCA 57.942 34.783 4.81 0.00 41.98 4.26
111 112 5.572511 TCAACGCATAATCACAAAAATGCTC 59.427 36.000 4.81 0.00 41.98 4.26
112 113 5.468592 TCAACGCATAATCACAAAAATGCT 58.531 33.333 4.81 0.00 41.98 3.79
113 114 5.760193 TCAACGCATAATCACAAAAATGC 57.240 34.783 0.00 0.00 41.00 3.56
114 115 7.103159 TGTTCAACGCATAATCACAAAAATG 57.897 32.000 0.00 0.00 0.00 2.32
115 116 7.706281 TTGTTCAACGCATAATCACAAAAAT 57.294 28.000 0.00 0.00 0.00 1.82
116 117 7.706281 ATTGTTCAACGCATAATCACAAAAA 57.294 28.000 0.00 0.00 0.00 1.94
117 118 8.978564 ATATTGTTCAACGCATAATCACAAAA 57.021 26.923 0.00 0.00 0.00 2.44
118 119 8.978564 AATATTGTTCAACGCATAATCACAAA 57.021 26.923 0.00 0.00 0.00 2.83
119 120 8.978564 AAATATTGTTCAACGCATAATCACAA 57.021 26.923 0.00 0.00 0.00 3.33
128 129 9.395707 ACGTAAATTTAAATATTGTTCAACGCA 57.604 25.926 0.01 0.00 0.00 5.24
135 136 9.425577 CCCCACAACGTAAATTTAAATATTGTT 57.574 29.630 0.01 2.24 0.00 2.83
136 137 8.804204 TCCCCACAACGTAAATTTAAATATTGT 58.196 29.630 0.01 5.81 0.00 2.71
137 138 9.078753 GTCCCCACAACGTAAATTTAAATATTG 57.921 33.333 0.01 5.24 0.00 1.90
138 139 8.804204 TGTCCCCACAACGTAAATTTAAATATT 58.196 29.630 0.01 1.67 0.00 1.28
139 140 8.350852 TGTCCCCACAACGTAAATTTAAATAT 57.649 30.769 0.01 0.00 0.00 1.28
140 141 7.756395 TGTCCCCACAACGTAAATTTAAATA 57.244 32.000 0.01 0.00 0.00 1.40
141 142 6.651975 TGTCCCCACAACGTAAATTTAAAT 57.348 33.333 0.00 0.00 0.00 1.40
142 143 6.461110 TTGTCCCCACAACGTAAATTTAAA 57.539 33.333 0.00 0.00 37.61 1.52
143 144 6.651975 ATTGTCCCCACAACGTAAATTTAA 57.348 33.333 0.00 0.00 45.47 1.52
144 145 6.490721 AGAATTGTCCCCACAACGTAAATTTA 59.509 34.615 0.00 0.00 45.47 1.40
145 146 5.303333 AGAATTGTCCCCACAACGTAAATTT 59.697 36.000 0.00 0.00 45.47 1.82
146 147 4.830600 AGAATTGTCCCCACAACGTAAATT 59.169 37.500 0.00 0.00 45.47 1.82
147 148 4.217550 CAGAATTGTCCCCACAACGTAAAT 59.782 41.667 0.00 0.00 45.47 1.40
148 149 3.566322 CAGAATTGTCCCCACAACGTAAA 59.434 43.478 0.00 0.00 45.47 2.01
149 150 3.142951 CAGAATTGTCCCCACAACGTAA 58.857 45.455 0.00 0.00 45.47 3.18
150 151 2.551287 CCAGAATTGTCCCCACAACGTA 60.551 50.000 0.00 0.00 45.47 3.57
151 152 1.604604 CAGAATTGTCCCCACAACGT 58.395 50.000 0.00 0.00 45.47 3.99
152 153 0.881118 CCAGAATTGTCCCCACAACG 59.119 55.000 0.00 0.00 45.47 4.10
153 154 1.256812 CCCAGAATTGTCCCCACAAC 58.743 55.000 0.00 0.00 45.47 3.32
154 155 0.541764 GCCCAGAATTGTCCCCACAA 60.542 55.000 0.00 0.00 46.71 3.33
155 156 1.076549 GCCCAGAATTGTCCCCACA 59.923 57.895 0.00 0.00 0.00 4.17
156 157 0.967380 CAGCCCAGAATTGTCCCCAC 60.967 60.000 0.00 0.00 0.00 4.61
157 158 1.383799 CAGCCCAGAATTGTCCCCA 59.616 57.895 0.00 0.00 0.00 4.96
158 159 0.967380 CACAGCCCAGAATTGTCCCC 60.967 60.000 0.00 0.00 0.00 4.81
159 160 0.967380 CCACAGCCCAGAATTGTCCC 60.967 60.000 0.00 0.00 0.00 4.46
160 161 0.251341 ACCACAGCCCAGAATTGTCC 60.251 55.000 0.00 0.00 0.00 4.02
161 162 1.620822 AACCACAGCCCAGAATTGTC 58.379 50.000 0.00 0.00 0.00 3.18
162 163 2.969821 TAACCACAGCCCAGAATTGT 57.030 45.000 0.00 0.00 0.00 2.71
163 164 4.021192 ACAAATAACCACAGCCCAGAATTG 60.021 41.667 0.00 0.00 0.00 2.32
164 165 4.021192 CACAAATAACCACAGCCCAGAATT 60.021 41.667 0.00 0.00 0.00 2.17
165 166 3.511146 CACAAATAACCACAGCCCAGAAT 59.489 43.478 0.00 0.00 0.00 2.40
166 167 2.890311 CACAAATAACCACAGCCCAGAA 59.110 45.455 0.00 0.00 0.00 3.02
167 168 2.513753 CACAAATAACCACAGCCCAGA 58.486 47.619 0.00 0.00 0.00 3.86
168 169 1.545582 CCACAAATAACCACAGCCCAG 59.454 52.381 0.00 0.00 0.00 4.45
169 170 1.626686 CCACAAATAACCACAGCCCA 58.373 50.000 0.00 0.00 0.00 5.36
170 171 0.246360 GCCACAAATAACCACAGCCC 59.754 55.000 0.00 0.00 0.00 5.19
171 172 0.246360 GGCCACAAATAACCACAGCC 59.754 55.000 0.00 0.00 0.00 4.85
172 173 0.246360 GGGCCACAAATAACCACAGC 59.754 55.000 4.39 0.00 0.00 4.40
173 174 1.545582 CTGGGCCACAAATAACCACAG 59.454 52.381 0.00 0.00 0.00 3.66
174 175 1.626686 CTGGGCCACAAATAACCACA 58.373 50.000 0.00 0.00 0.00 4.17
175 176 0.894835 CCTGGGCCACAAATAACCAC 59.105 55.000 0.00 0.00 0.00 4.16
176 177 0.485099 ACCTGGGCCACAAATAACCA 59.515 50.000 0.00 0.00 0.00 3.67
177 178 1.639722 AACCTGGGCCACAAATAACC 58.360 50.000 0.00 0.00 0.00 2.85
178 179 3.692690 TCTAACCTGGGCCACAAATAAC 58.307 45.455 0.00 0.00 0.00 1.89
179 180 4.277476 CATCTAACCTGGGCCACAAATAA 58.723 43.478 0.00 0.00 0.00 1.40
180 181 3.897239 CATCTAACCTGGGCCACAAATA 58.103 45.455 0.00 0.00 0.00 1.40
181 182 2.738743 CATCTAACCTGGGCCACAAAT 58.261 47.619 0.00 0.00 0.00 2.32
202 203 1.467678 CGGCTCCTCCCTACATCCAG 61.468 65.000 0.00 0.00 0.00 3.86
219 220 2.431942 AACCAACGTAGCGCTCGG 60.432 61.111 25.38 17.25 0.00 4.63
220 221 1.076533 ATGAACCAACGTAGCGCTCG 61.077 55.000 16.34 20.10 0.00 5.03
254 255 0.512952 AACGAAGCATTGCTCGTCAC 59.487 50.000 25.35 11.00 39.77 3.67
258 300 0.179215 GGTCAACGAAGCATTGCTCG 60.179 55.000 21.03 21.03 38.25 5.03
264 306 0.394352 GGGATGGGTCAACGAAGCAT 60.394 55.000 0.00 0.00 0.00 3.79
297 339 4.408821 TCACTCACATGGGCGGGC 62.409 66.667 0.00 0.00 0.00 6.13
298 340 2.436646 GTCACTCACATGGGCGGG 60.437 66.667 0.00 0.00 0.00 6.13
299 341 1.742880 CAGTCACTCACATGGGCGG 60.743 63.158 0.00 0.00 0.00 6.13
300 342 2.393768 GCAGTCACTCACATGGGCG 61.394 63.158 0.00 0.00 0.00 6.13
301 343 1.002868 AGCAGTCACTCACATGGGC 60.003 57.895 0.00 0.00 0.00 5.36
302 344 1.303799 GCAGCAGTCACTCACATGGG 61.304 60.000 0.00 0.00 0.00 4.00
304 346 0.604511 TGGCAGCAGTCACTCACATG 60.605 55.000 0.00 0.00 0.00 3.21
305 347 0.604780 GTGGCAGCAGTCACTCACAT 60.605 55.000 6.59 0.00 46.70 3.21
306 348 1.227645 GTGGCAGCAGTCACTCACA 60.228 57.895 6.59 0.00 46.70 3.58
307 349 3.647824 GTGGCAGCAGTCACTCAC 58.352 61.111 6.59 0.00 46.70 3.51
329 372 1.905894 GAGGAAGCAGGAAGAAGACCT 59.094 52.381 0.00 0.00 38.40 3.85
330 373 1.065782 GGAGGAAGCAGGAAGAAGACC 60.066 57.143 0.00 0.00 0.00 3.85
332 375 2.183679 GAGGAGGAAGCAGGAAGAAGA 58.816 52.381 0.00 0.00 0.00 2.87
333 376 2.168313 GAGAGGAGGAAGCAGGAAGAAG 59.832 54.545 0.00 0.00 0.00 2.85
334 377 2.183679 GAGAGGAGGAAGCAGGAAGAA 58.816 52.381 0.00 0.00 0.00 2.52
336 379 1.566211 TGAGAGGAGGAAGCAGGAAG 58.434 55.000 0.00 0.00 0.00 3.46
337 380 1.625818 GTTGAGAGGAGGAAGCAGGAA 59.374 52.381 0.00 0.00 0.00 3.36
338 381 1.203237 AGTTGAGAGGAGGAAGCAGGA 60.203 52.381 0.00 0.00 0.00 3.86
339 382 1.066286 CAGTTGAGAGGAGGAAGCAGG 60.066 57.143 0.00 0.00 0.00 4.85
340 383 1.675415 GCAGTTGAGAGGAGGAAGCAG 60.675 57.143 0.00 0.00 0.00 4.24
341 384 0.322975 GCAGTTGAGAGGAGGAAGCA 59.677 55.000 0.00 0.00 0.00 3.91
342 385 0.612744 AGCAGTTGAGAGGAGGAAGC 59.387 55.000 0.00 0.00 0.00 3.86
343 386 1.206849 GGAGCAGTTGAGAGGAGGAAG 59.793 57.143 0.00 0.00 0.00 3.46
344 387 1.203237 AGGAGCAGTTGAGAGGAGGAA 60.203 52.381 0.00 0.00 0.00 3.36
369 412 1.476477 GGGACTAGTGGAGTGGAGAC 58.524 60.000 0.00 0.00 39.06 3.36
370 413 0.335361 GGGGACTAGTGGAGTGGAGA 59.665 60.000 0.00 0.00 39.06 3.71
371 414 0.336737 AGGGGACTAGTGGAGTGGAG 59.663 60.000 0.00 0.00 39.06 3.86
402 445 2.116125 GCAGTTGCTCAGGGGGTT 59.884 61.111 0.00 0.00 38.21 4.11
452 495 6.126409 AGAAACGATCTGAGTAAGGAGATCT 58.874 40.000 0.00 0.00 41.67 2.75
464 507 4.996758 TGCTTGATTTGAGAAACGATCTGA 59.003 37.500 0.00 0.00 38.96 3.27
471 514 3.229552 GCGACTGCTTGATTTGAGAAAC 58.770 45.455 0.00 0.00 38.39 2.78
477 520 2.031769 TCACTTGCGACTGCTTGATTTG 60.032 45.455 0.00 0.00 43.34 2.32
497 540 3.323403 AGCCTGCAGATCCACTTATACTC 59.677 47.826 17.39 0.00 0.00 2.59
529 572 1.910580 ATCGCCACCCCTCACGAATT 61.911 55.000 0.00 0.00 38.15 2.17
544 587 4.404507 TGCAACTTGAAGACTAAATCGC 57.595 40.909 0.00 0.00 0.00 4.58
546 589 5.855395 CAGCTTGCAACTTGAAGACTAAATC 59.145 40.000 0.00 0.00 0.00 2.17
554 597 1.268899 CTCCCAGCTTGCAACTTGAAG 59.731 52.381 0.00 0.00 0.00 3.02
561 606 2.554636 CGTTGCTCCCAGCTTGCAA 61.555 57.895 0.00 0.00 42.97 4.08
579 624 5.638234 ACCTGTTACAGTAGCTTTTCGAATC 59.362 40.000 11.68 0.00 0.00 2.52
614 659 8.271312 AGAATGGCAAATTTTAAATCCACATG 57.729 30.769 0.00 0.00 0.00 3.21
627 672 7.414222 ACATGTCAAGATAGAATGGCAAATT 57.586 32.000 0.00 0.00 34.41 1.82
628 673 8.523915 TTACATGTCAAGATAGAATGGCAAAT 57.476 30.769 0.00 0.00 34.41 2.32
634 681 9.447040 CTGCAATTTACATGTCAAGATAGAATG 57.553 33.333 0.00 0.00 0.00 2.67
647 694 4.789012 AAGGTGGTCTGCAATTTACATG 57.211 40.909 0.00 0.00 0.00 3.21
650 697 7.602753 AGAATTAAAGGTGGTCTGCAATTTAC 58.397 34.615 0.00 0.00 0.00 2.01
679 728 7.008447 GTCAGTGAACGCAATCTAAACTACTAG 59.992 40.741 0.00 0.00 0.00 2.57
681 730 5.634020 GTCAGTGAACGCAATCTAAACTACT 59.366 40.000 0.00 0.00 0.00 2.57
682 731 5.404366 TGTCAGTGAACGCAATCTAAACTAC 59.596 40.000 0.00 0.00 0.00 2.73
683 732 5.404366 GTGTCAGTGAACGCAATCTAAACTA 59.596 40.000 0.00 0.00 0.00 2.24
684 733 4.211374 GTGTCAGTGAACGCAATCTAAACT 59.789 41.667 0.00 0.00 0.00 2.66
685 734 4.211374 AGTGTCAGTGAACGCAATCTAAAC 59.789 41.667 0.00 0.00 32.00 2.01
686 735 4.211164 CAGTGTCAGTGAACGCAATCTAAA 59.789 41.667 0.96 0.00 32.00 1.85
687 736 3.740832 CAGTGTCAGTGAACGCAATCTAA 59.259 43.478 0.96 0.00 32.00 2.10
688 737 3.317150 CAGTGTCAGTGAACGCAATCTA 58.683 45.455 0.96 0.00 32.00 1.98
689 738 2.138320 CAGTGTCAGTGAACGCAATCT 58.862 47.619 0.96 0.00 32.00 2.40
690 739 1.398960 GCAGTGTCAGTGAACGCAATC 60.399 52.381 12.04 0.00 32.00 2.67
691 740 0.588252 GCAGTGTCAGTGAACGCAAT 59.412 50.000 12.04 0.00 32.00 3.56
692 741 1.761244 CGCAGTGTCAGTGAACGCAA 61.761 55.000 12.04 0.00 32.00 4.85
693 742 2.237066 CGCAGTGTCAGTGAACGCA 61.237 57.895 12.04 0.00 32.00 5.24
694 743 1.487452 TTCGCAGTGTCAGTGAACGC 61.487 55.000 12.04 3.90 31.17 4.84
696 745 1.663643 TGTTTCGCAGTGTCAGTGAAC 59.336 47.619 12.04 7.65 35.45 3.18
697 746 2.017138 TGTTTCGCAGTGTCAGTGAA 57.983 45.000 12.04 0.00 34.03 3.18
698 747 1.933181 CTTGTTTCGCAGTGTCAGTGA 59.067 47.619 12.04 0.00 0.00 3.41
699 748 1.595489 GCTTGTTTCGCAGTGTCAGTG 60.595 52.381 3.06 3.06 0.00 3.66
710 759 0.371645 GATCCAGCTCGCTTGTTTCG 59.628 55.000 0.00 0.00 0.00 3.46
760 809 2.271173 GGGATCCGGTGGTGGAAC 59.729 66.667 5.45 0.00 42.46 3.62
761 810 3.012722 GGGGATCCGGTGGTGGAA 61.013 66.667 5.45 0.00 42.46 3.53
771 820 1.271656 CGTACCTATTGACGGGGATCC 59.728 57.143 1.92 1.92 35.43 3.36
772 821 2.030451 GTCGTACCTATTGACGGGGATC 60.030 54.545 0.00 0.00 39.53 3.36
773 822 1.959282 GTCGTACCTATTGACGGGGAT 59.041 52.381 0.00 0.00 39.53 3.85
774 823 1.392589 GTCGTACCTATTGACGGGGA 58.607 55.000 0.00 0.00 39.53 4.81
775 824 0.386838 GGTCGTACCTATTGACGGGG 59.613 60.000 0.00 0.00 39.53 5.73
776 825 0.386838 GGGTCGTACCTATTGACGGG 59.613 60.000 4.41 0.00 38.64 5.28
777 826 0.386838 GGGGTCGTACCTATTGACGG 59.613 60.000 4.41 0.00 38.64 4.79
778 827 1.105457 TGGGGTCGTACCTATTGACG 58.895 55.000 4.41 0.00 38.64 4.35
779 828 2.963782 AGATGGGGTCGTACCTATTGAC 59.036 50.000 4.41 0.00 38.64 3.18
780 829 2.963101 CAGATGGGGTCGTACCTATTGA 59.037 50.000 4.41 0.00 38.64 2.57
781 830 2.548067 GCAGATGGGGTCGTACCTATTG 60.548 54.545 4.41 4.24 38.64 1.90
782 831 1.692519 GCAGATGGGGTCGTACCTATT 59.307 52.381 4.41 0.00 38.64 1.73
783 832 1.133136 AGCAGATGGGGTCGTACCTAT 60.133 52.381 4.41 1.07 38.64 2.57
784 833 0.260816 AGCAGATGGGGTCGTACCTA 59.739 55.000 4.41 0.00 38.64 3.08
785 834 1.001760 AGCAGATGGGGTCGTACCT 59.998 57.895 4.41 0.00 38.64 3.08
786 835 1.442148 GAGCAGATGGGGTCGTACC 59.558 63.158 0.00 0.00 37.60 3.34
787 836 1.043673 AGGAGCAGATGGGGTCGTAC 61.044 60.000 0.00 0.00 36.17 3.67
788 837 1.043116 CAGGAGCAGATGGGGTCGTA 61.043 60.000 0.00 0.00 36.17 3.43
789 838 2.039624 AGGAGCAGATGGGGTCGT 59.960 61.111 0.00 0.00 36.17 4.34
790 839 2.503061 CAGGAGCAGATGGGGTCG 59.497 66.667 0.00 0.00 36.17 4.79
791 840 2.191641 GCAGGAGCAGATGGGGTC 59.808 66.667 0.00 0.00 41.58 4.46
792 841 3.415087 GGCAGGAGCAGATGGGGT 61.415 66.667 0.00 0.00 44.61 4.95
793 842 4.201122 GGGCAGGAGCAGATGGGG 62.201 72.222 0.00 0.00 44.61 4.96
794 843 3.095163 AGGGCAGGAGCAGATGGG 61.095 66.667 0.00 0.00 44.61 4.00
795 844 2.192443 CAGGGCAGGAGCAGATGG 59.808 66.667 0.00 0.00 44.61 3.51
796 845 2.516460 GCAGGGCAGGAGCAGATG 60.516 66.667 0.00 0.00 44.61 2.90
797 846 2.268167 GAAGCAGGGCAGGAGCAGAT 62.268 60.000 0.00 0.00 44.61 2.90
798 847 2.932194 AAGCAGGGCAGGAGCAGA 60.932 61.111 0.00 0.00 44.61 4.26
799 848 2.438075 GAAGCAGGGCAGGAGCAG 60.438 66.667 0.00 0.00 44.61 4.24
800 849 4.039092 GGAAGCAGGGCAGGAGCA 62.039 66.667 0.00 0.00 44.61 4.26
801 850 3.355957 ATGGAAGCAGGGCAGGAGC 62.356 63.158 0.00 0.00 41.10 4.70
802 851 1.153005 GATGGAAGCAGGGCAGGAG 60.153 63.158 0.00 0.00 0.00 3.69
803 852 1.617536 AGATGGAAGCAGGGCAGGA 60.618 57.895 0.00 0.00 0.00 3.86
804 853 1.153005 GAGATGGAAGCAGGGCAGG 60.153 63.158 0.00 0.00 0.00 4.85
805 854 0.179051 GAGAGATGGAAGCAGGGCAG 60.179 60.000 0.00 0.00 0.00 4.85
806 855 0.619832 AGAGAGATGGAAGCAGGGCA 60.620 55.000 0.00 0.00 0.00 5.36
807 856 0.106521 GAGAGAGATGGAAGCAGGGC 59.893 60.000 0.00 0.00 0.00 5.19
808 857 0.388659 CGAGAGAGATGGAAGCAGGG 59.611 60.000 0.00 0.00 0.00 4.45
809 858 1.110442 ACGAGAGAGATGGAAGCAGG 58.890 55.000 0.00 0.00 0.00 4.85
810 859 3.856638 GCATACGAGAGAGATGGAAGCAG 60.857 52.174 0.00 0.00 0.00 4.24
811 860 2.035193 GCATACGAGAGAGATGGAAGCA 59.965 50.000 0.00 0.00 0.00 3.91
812 861 2.295909 AGCATACGAGAGAGATGGAAGC 59.704 50.000 0.00 0.00 0.00 3.86
813 862 3.856638 GCAGCATACGAGAGAGATGGAAG 60.857 52.174 0.00 0.00 0.00 3.46
814 863 2.035193 GCAGCATACGAGAGAGATGGAA 59.965 50.000 0.00 0.00 0.00 3.53
815 864 1.611006 GCAGCATACGAGAGAGATGGA 59.389 52.381 0.00 0.00 0.00 3.41
816 865 1.336702 GGCAGCATACGAGAGAGATGG 60.337 57.143 0.00 0.00 0.00 3.51
817 866 1.665448 CGGCAGCATACGAGAGAGATG 60.665 57.143 0.00 0.00 0.00 2.90
818 867 0.595588 CGGCAGCATACGAGAGAGAT 59.404 55.000 0.00 0.00 0.00 2.75
819 868 1.448119 CCGGCAGCATACGAGAGAGA 61.448 60.000 0.00 0.00 0.00 3.10
820 869 1.007964 CCGGCAGCATACGAGAGAG 60.008 63.158 0.00 0.00 0.00 3.20
821 870 3.120105 CCGGCAGCATACGAGAGA 58.880 61.111 0.00 0.00 0.00 3.10
822 871 2.659897 GCCGGCAGCATACGAGAG 60.660 66.667 24.80 0.00 42.97 3.20
837 886 2.750237 CTACAAACCGGCCCAGCC 60.750 66.667 0.00 0.00 46.75 4.85
838 887 3.440415 GCTACAAACCGGCCCAGC 61.440 66.667 0.00 0.00 0.00 4.85
839 888 0.893727 AAAGCTACAAACCGGCCCAG 60.894 55.000 0.00 0.00 0.00 4.45
840 889 0.468400 AAAAGCTACAAACCGGCCCA 60.468 50.000 0.00 0.00 0.00 5.36
841 890 0.242825 GAAAAGCTACAAACCGGCCC 59.757 55.000 0.00 0.00 0.00 5.80
842 891 0.242825 GGAAAAGCTACAAACCGGCC 59.757 55.000 0.00 0.00 0.00 6.13
843 892 0.955905 TGGAAAAGCTACAAACCGGC 59.044 50.000 0.00 0.00 0.00 6.13
844 893 2.031157 CACTGGAAAAGCTACAAACCGG 60.031 50.000 0.00 0.00 0.00 5.28
845 894 2.604614 GCACTGGAAAAGCTACAAACCG 60.605 50.000 0.00 0.00 0.00 4.44
846 895 2.360801 TGCACTGGAAAAGCTACAAACC 59.639 45.455 0.00 0.00 0.00 3.27
847 896 3.066760 ACTGCACTGGAAAAGCTACAAAC 59.933 43.478 0.00 0.00 0.00 2.93
848 897 3.287222 ACTGCACTGGAAAAGCTACAAA 58.713 40.909 0.00 0.00 0.00 2.83
849 898 2.930950 ACTGCACTGGAAAAGCTACAA 58.069 42.857 0.00 0.00 0.00 2.41
850 899 2.638480 ACTGCACTGGAAAAGCTACA 57.362 45.000 0.00 0.00 0.00 2.74
851 900 5.875359 AGTATTACTGCACTGGAAAAGCTAC 59.125 40.000 0.00 0.00 0.00 3.58
852 901 6.049955 AGTATTACTGCACTGGAAAAGCTA 57.950 37.500 0.00 0.00 0.00 3.32
853 902 4.911390 AGTATTACTGCACTGGAAAAGCT 58.089 39.130 0.00 0.00 0.00 3.74
854 903 5.393962 CAAGTATTACTGCACTGGAAAAGC 58.606 41.667 0.00 0.00 0.00 3.51
855 904 5.106157 CCCAAGTATTACTGCACTGGAAAAG 60.106 44.000 12.07 0.00 0.00 2.27
856 905 4.764823 CCCAAGTATTACTGCACTGGAAAA 59.235 41.667 12.07 0.00 0.00 2.29
857 906 4.331968 CCCAAGTATTACTGCACTGGAAA 58.668 43.478 12.07 0.00 0.00 3.13
858 907 3.872240 GCCCAAGTATTACTGCACTGGAA 60.872 47.826 12.07 0.00 0.00 3.53
859 908 2.355716 GCCCAAGTATTACTGCACTGGA 60.356 50.000 12.07 0.00 0.00 3.86
860 909 2.017049 GCCCAAGTATTACTGCACTGG 58.983 52.381 0.00 1.51 0.00 4.00
861 910 2.991250 AGCCCAAGTATTACTGCACTG 58.009 47.619 0.00 0.00 0.00 3.66
862 911 3.721087 AAGCCCAAGTATTACTGCACT 57.279 42.857 0.00 0.00 0.00 4.40
863 912 4.514401 AGTAAGCCCAAGTATTACTGCAC 58.486 43.478 0.00 0.00 38.11 4.57
864 913 4.383770 GGAGTAAGCCCAAGTATTACTGCA 60.384 45.833 9.91 0.00 43.37 4.41
865 914 4.127907 GGAGTAAGCCCAAGTATTACTGC 58.872 47.826 0.00 1.42 39.28 4.40
866 915 4.098960 TCGGAGTAAGCCCAAGTATTACTG 59.901 45.833 0.00 0.00 39.28 2.74
867 916 4.284178 TCGGAGTAAGCCCAAGTATTACT 58.716 43.478 0.00 0.00 41.28 2.24
868 917 4.660789 TCGGAGTAAGCCCAAGTATTAC 57.339 45.455 0.00 0.00 0.00 1.89
869 918 5.881923 AATCGGAGTAAGCCCAAGTATTA 57.118 39.130 0.00 0.00 0.00 0.98
870 919 4.772886 AATCGGAGTAAGCCCAAGTATT 57.227 40.909 0.00 0.00 0.00 1.89
871 920 5.881923 TTAATCGGAGTAAGCCCAAGTAT 57.118 39.130 0.00 0.00 0.00 2.12
872 921 5.221581 GGATTAATCGGAGTAAGCCCAAGTA 60.222 44.000 18.81 0.00 32.02 2.24
873 922 4.444449 GGATTAATCGGAGTAAGCCCAAGT 60.444 45.833 18.81 0.00 32.02 3.16
874 923 4.065789 GGATTAATCGGAGTAAGCCCAAG 58.934 47.826 18.81 0.00 32.02 3.61
875 924 3.714798 AGGATTAATCGGAGTAAGCCCAA 59.285 43.478 23.96 0.00 37.67 4.12
876 925 3.314693 AGGATTAATCGGAGTAAGCCCA 58.685 45.455 23.96 0.00 37.67 5.36
877 926 4.040584 AGAAGGATTAATCGGAGTAAGCCC 59.959 45.833 23.96 16.46 37.67 5.19
878 927 5.216614 AGAAGGATTAATCGGAGTAAGCC 57.783 43.478 21.18 21.18 37.29 4.35
879 928 7.280205 TGAAAAGAAGGATTAATCGGAGTAAGC 59.720 37.037 9.32 5.00 0.00 3.09
880 929 8.718102 TGAAAAGAAGGATTAATCGGAGTAAG 57.282 34.615 9.32 0.00 0.00 2.34
882 931 9.982651 CTATGAAAAGAAGGATTAATCGGAGTA 57.017 33.333 9.32 0.00 0.00 2.59
883 932 7.442666 GCTATGAAAAGAAGGATTAATCGGAGT 59.557 37.037 9.32 0.00 0.00 3.85
884 933 7.359598 CGCTATGAAAAGAAGGATTAATCGGAG 60.360 40.741 9.32 0.00 0.00 4.63
885 934 6.423905 CGCTATGAAAAGAAGGATTAATCGGA 59.576 38.462 9.32 0.00 0.00 4.55
886 935 6.202954 ACGCTATGAAAAGAAGGATTAATCGG 59.797 38.462 9.32 0.00 0.00 4.18
887 936 7.178712 ACGCTATGAAAAGAAGGATTAATCG 57.821 36.000 9.32 0.00 0.00 3.34
888 937 9.477484 TCTACGCTATGAAAAGAAGGATTAATC 57.523 33.333 6.93 6.93 0.00 1.75
951 1003 1.906824 TGGAGGTCAGGTCGTCCAC 60.907 63.158 0.51 0.00 44.13 4.02
972 1024 0.901827 TGCTCGCCCTGTCAATTCTA 59.098 50.000 0.00 0.00 0.00 2.10
1188 1241 6.239402 CCTCATTCATCCAAACTTTTTCCTGT 60.239 38.462 0.00 0.00 0.00 4.00
1194 1247 4.559300 CGCACCTCATTCATCCAAACTTTT 60.559 41.667 0.00 0.00 0.00 2.27
1364 1426 9.459640 CCTCGATAATACGTTTCTTCAAATCTA 57.540 33.333 0.00 0.00 34.70 1.98
1506 1589 1.092345 GCTCTGCCTTCGGTTCATCC 61.092 60.000 0.00 0.00 0.00 3.51
1563 1646 5.484173 TCTTCACTTGTTGATGTTGTGTC 57.516 39.130 0.00 0.00 32.84 3.67
1570 1665 5.121925 CAGAGACCATCTTCACTTGTTGATG 59.878 44.000 0.00 0.00 35.47 3.07
1751 1849 7.287927 CACTCCCTCCTTCTGTATCAGTATAAA 59.712 40.741 0.00 0.00 32.61 1.40
1761 1859 3.820195 TGTACACTCCCTCCTTCTGTA 57.180 47.619 0.00 0.00 0.00 2.74
1769 1867 2.633481 AGGAGTTGTTGTACACTCCCTC 59.367 50.000 20.94 12.67 42.31 4.30
1882 1980 9.438291 CGTTTATAATTTTCATGAGACACATCC 57.562 33.333 0.00 0.00 37.07 3.51
1976 2074 9.567848 CAACAATACAAACATCTAACCATTACC 57.432 33.333 0.00 0.00 0.00 2.85
2022 2120 5.762179 TCACAAGGTCTCACCATTCTATT 57.238 39.130 0.00 0.00 41.95 1.73
2052 2150 5.590663 GGGAAGATTCTTAGGATTGGTTGTC 59.409 44.000 0.00 0.00 0.00 3.18
2070 2168 8.501904 TCATGGAAATCATACAATTAGGGAAGA 58.498 33.333 0.00 0.00 34.12 2.87
2072 2170 8.058235 TGTCATGGAAATCATACAATTAGGGAA 58.942 33.333 0.00 0.00 34.12 3.97
2074 2172 7.822161 TGTCATGGAAATCATACAATTAGGG 57.178 36.000 0.00 0.00 34.12 3.53
2083 2183 6.183361 TGAGTGGCTATGTCATGGAAATCATA 60.183 38.462 0.00 0.00 34.12 2.15
2119 2219 3.131577 GCATGCAAATCCAAAGATCAGGA 59.868 43.478 14.21 4.34 38.50 3.86
2121 2221 3.863424 GTGCATGCAAATCCAAAGATCAG 59.137 43.478 24.58 0.00 0.00 2.90
2149 2249 1.003118 CTGACCCGAACCAAGAATCCA 59.997 52.381 0.00 0.00 0.00 3.41
2163 2263 5.401531 TCAAATAGTAGTGTCACTGACCC 57.598 43.478 16.03 0.00 0.00 4.46
2174 2274 8.255111 TCAGGACATGATGATCAAATAGTAGT 57.745 34.615 0.00 0.00 31.12 2.73
2246 2346 6.533012 GGAGATTATGTATCATCATGTCCGTG 59.467 42.308 4.98 0.00 35.59 4.94
2247 2347 6.351371 GGGAGATTATGTATCATCATGTCCGT 60.351 42.308 11.31 0.00 35.59 4.69
2248 2348 6.045318 GGGAGATTATGTATCATCATGTCCG 58.955 44.000 11.31 0.00 35.59 4.79
2249 2349 6.950842 TGGGAGATTATGTATCATCATGTCC 58.049 40.000 9.93 9.93 35.59 4.02
2252 2352 9.053840 GCTTATGGGAGATTATGTATCATCATG 57.946 37.037 0.00 0.00 35.59 3.07
2253 2353 9.000978 AGCTTATGGGAGATTATGTATCATCAT 57.999 33.333 0.00 0.00 35.59 2.45
2254 2354 8.262933 CAGCTTATGGGAGATTATGTATCATCA 58.737 37.037 0.00 0.00 35.59 3.07
2255 2355 8.263640 ACAGCTTATGGGAGATTATGTATCATC 58.736 37.037 0.00 0.00 35.59 2.92
2256 2356 8.155620 ACAGCTTATGGGAGATTATGTATCAT 57.844 34.615 0.00 0.00 35.59 2.45
2257 2357 7.235399 TGACAGCTTATGGGAGATTATGTATCA 59.765 37.037 0.00 0.00 35.59 2.15
2258 2358 7.615403 TGACAGCTTATGGGAGATTATGTATC 58.385 38.462 0.00 0.00 0.00 2.24
2259 2359 7.559335 TGACAGCTTATGGGAGATTATGTAT 57.441 36.000 0.00 0.00 0.00 2.29
2266 2366 5.121380 ACAAATGACAGCTTATGGGAGAT 57.879 39.130 0.00 0.00 0.00 2.75
2283 2383 8.815912 GGGGCTCATGGAAATTATAATACAAAT 58.184 33.333 0.00 0.00 0.00 2.32
2298 2398 0.842030 ACTCAACTGGGGCTCATGGA 60.842 55.000 0.00 0.00 0.00 3.41
2333 2433 7.360946 GGAGCGGTCATGTTTTGGATATAATAC 60.361 40.741 17.59 0.00 0.00 1.89
2334 2434 6.653320 GGAGCGGTCATGTTTTGGATATAATA 59.347 38.462 17.59 0.00 0.00 0.98
2352 2452 1.523758 GTGACTTGAAATGGAGCGGT 58.476 50.000 0.00 0.00 0.00 5.68
2353 2453 0.804989 GGTGACTTGAAATGGAGCGG 59.195 55.000 0.00 0.00 0.00 5.52
2354 2454 0.804989 GGGTGACTTGAAATGGAGCG 59.195 55.000 0.00 0.00 0.00 5.03
2355 2455 2.206576 AGGGTGACTTGAAATGGAGC 57.793 50.000 0.00 0.00 0.00 4.70
2388 2489 2.722629 TCAAGACGTGACGATCGAAAAC 59.277 45.455 24.34 14.87 0.00 2.43
2402 2503 2.483106 GCATGGATGATGGATCAAGACG 59.517 50.000 0.00 0.00 40.69 4.18
2414 2515 5.925506 ATGTTGAAAAGATGCATGGATGA 57.074 34.783 2.46 0.00 0.00 2.92
2415 2516 9.923143 AATATATGTTGAAAAGATGCATGGATG 57.077 29.630 2.46 0.00 29.89 3.51
2417 2518 9.358406 AGAATATATGTTGAAAAGATGCATGGA 57.642 29.630 2.46 0.00 29.89 3.41
2418 2519 9.622004 GAGAATATATGTTGAAAAGATGCATGG 57.378 33.333 2.46 0.00 29.89 3.66
2694 2797 8.095792 TGTACACGATTAAGATGGGAAAGTTAA 58.904 33.333 0.00 0.00 0.00 2.01
2698 2801 6.345920 GTGTACACGATTAAGATGGGAAAG 57.654 41.667 10.84 0.00 0.00 2.62
2720 2823 4.569564 GGAACCTCAAAACGATATAAGCGT 59.430 41.667 0.00 0.00 44.94 5.07
2722 2825 7.208080 TCTAGGAACCTCAAAACGATATAAGC 58.792 38.462 0.00 0.00 0.00 3.09
2772 2876 7.275560 TGTTCTATAACACACGACATTCATGAG 59.724 37.037 0.00 0.00 40.69 2.90
2790 2894 9.787435 AAAGTTTGTAGGTTCACATGTTCTATA 57.213 29.630 0.00 0.00 0.00 1.31
2808 2912 9.225436 TGCAGGAATTTTTAAAAGAAAGTTTGT 57.775 25.926 0.14 0.00 0.00 2.83
2834 2965 9.585369 AAACAATGAAAATTTTGGGGTCATAAT 57.415 25.926 8.47 0.00 0.00 1.28
2897 3028 4.756642 CCATATCACGTGAACCTGCATAAT 59.243 41.667 24.13 4.15 0.00 1.28
2900 3031 2.564771 CCATATCACGTGAACCTGCAT 58.435 47.619 24.13 6.57 0.00 3.96
2912 3043 4.875544 AACATTGTGTACGCCATATCAC 57.124 40.909 3.51 0.00 0.00 3.06
2972 3103 3.893720 CGCAAGCTCTCATCTTGTTTTT 58.106 40.909 0.00 0.00 42.06 1.94
3010 3141 6.582636 AGATAAAAGACCACGATATTGCTCA 58.417 36.000 0.00 0.00 0.00 4.26
3021 3152 6.478344 CACAGAGCATAGAGATAAAAGACCAC 59.522 42.308 0.00 0.00 0.00 4.16
3064 3195 9.286170 ACTCGACTGATACAATAATAGAAGCTA 57.714 33.333 0.00 0.00 0.00 3.32
3093 3224 9.796120 CACGGGTGTTAAAATGACATAAATTAT 57.204 29.630 0.00 0.00 0.00 1.28
3099 3230 5.306394 TGACACGGGTGTTAAAATGACATA 58.694 37.500 0.00 0.00 45.05 2.29
3151 3282 4.067972 AGGAGCACTTGTTTTCTCGTTA 57.932 40.909 0.00 0.00 0.00 3.18
3175 3306 9.225436 ACAAGCACCAAAAGAAAAAGAAAAATA 57.775 25.926 0.00 0.00 0.00 1.40
3210 3341 9.155975 GGATTTATGAGATATTAGCATGACGTT 57.844 33.333 0.00 0.00 0.00 3.99
3211 3342 8.314021 TGGATTTATGAGATATTAGCATGACGT 58.686 33.333 0.00 0.00 0.00 4.34
3375 3628 1.538047 ATATGGCCACCGAATGATGC 58.462 50.000 8.16 0.00 0.00 3.91
3462 3715 2.368548 GGTGTGGAGGGCAATTTTCTTT 59.631 45.455 0.00 0.00 0.00 2.52
3569 3822 2.105649 CCATAGGCCCTCTCTTCTTTCC 59.894 54.545 0.00 0.00 0.00 3.13
3577 3830 1.141858 CTTGGTTCCATAGGCCCTCTC 59.858 57.143 0.00 0.00 0.00 3.20
3689 3942 5.906113 ATAAGAGACACGTCTTCAGATGT 57.094 39.130 0.38 0.00 44.50 3.06
3894 4147 4.629200 GTCATGAACTTGGCAACTCTCTAG 59.371 45.833 0.00 0.00 37.61 2.43
4026 4280 8.617290 TTTCCTTGATTAACTCCTTGTAGAAC 57.383 34.615 0.00 0.00 0.00 3.01
4242 4496 9.561270 GAGCTTCCTTATTTCTGTATTTTTGAC 57.439 33.333 0.00 0.00 0.00 3.18
4365 4619 4.990526 AGTCAACAAGAAGATGGGTCAAT 58.009 39.130 0.00 0.00 0.00 2.57
4458 4734 1.555967 GGAAGCCAAATGGTTGCCTA 58.444 50.000 6.07 0.00 40.73 3.93
4460 4736 0.037046 CAGGAAGCCAAATGGTTGCC 60.037 55.000 5.17 5.17 44.04 4.52
4556 4838 5.357032 CACTCCCCTTCAACCATATTTGTAC 59.643 44.000 0.00 0.00 0.00 2.90
4574 4856 5.558818 AGATGATAGATTTGATGCACTCCC 58.441 41.667 0.00 0.00 0.00 4.30
4764 5067 5.141182 TCATCCACTAGAAGGTGTATCTCC 58.859 45.833 0.00 0.00 35.63 3.71
4876 5182 4.136796 CCAACTTCACCACTGATTCTGAA 58.863 43.478 0.00 0.00 0.00 3.02
4943 5249 3.273434 GCTGCAAACATCAGATCTACCA 58.727 45.455 0.00 0.00 33.54 3.25
5056 5368 8.325997 GTCATTTGTACTACATTTGACCGTATC 58.674 37.037 15.13 0.00 35.80 2.24
5057 5369 7.009815 CGTCATTTGTACTACATTTGACCGTAT 59.990 37.037 17.87 0.00 37.20 3.06
5098 5413 1.140452 CATGGCAGTCTGTATGGCTCT 59.860 52.381 0.93 0.00 43.25 4.09
5177 5492 4.466015 TGGGCCTTCCAGACAAATAAAATC 59.534 41.667 4.53 0.00 41.46 2.17
5180 5495 3.534357 TGGGCCTTCCAGACAAATAAA 57.466 42.857 4.53 0.00 41.46 1.40
5191 5506 2.143876 TAATCAAAGCTGGGCCTTCC 57.856 50.000 4.53 0.00 0.00 3.46
5192 5507 3.258123 TGTTTAATCAAAGCTGGGCCTTC 59.742 43.478 4.53 0.00 0.00 3.46
5195 5510 3.588955 CTTGTTTAATCAAAGCTGGGCC 58.411 45.455 0.00 0.00 0.00 5.80
5219 5534 0.178897 TCCCCCGTTCCTGGTTCTTA 60.179 55.000 0.00 0.00 0.00 2.10
5245 5560 3.157252 GCTGGCCGGATGAGGAGA 61.157 66.667 18.31 0.00 0.00 3.71
5256 5571 1.609208 AACATGATAATCGGCTGGCC 58.391 50.000 0.00 0.00 0.00 5.36
5257 5572 4.515191 TCTTAAACATGATAATCGGCTGGC 59.485 41.667 0.00 0.00 0.00 4.85
5258 5573 5.760253 ACTCTTAAACATGATAATCGGCTGG 59.240 40.000 0.00 0.00 0.00 4.85
5259 5574 6.851222 ACTCTTAAACATGATAATCGGCTG 57.149 37.500 0.00 0.00 0.00 4.85
5260 5575 9.209175 GAATACTCTTAAACATGATAATCGGCT 57.791 33.333 0.00 0.00 0.00 5.52
5261 5576 8.988934 TGAATACTCTTAAACATGATAATCGGC 58.011 33.333 0.00 0.00 0.00 5.54
5268 5586 7.568349 TGGAGCTGAATACTCTTAAACATGAT 58.432 34.615 0.00 0.00 34.46 2.45
5272 5590 8.079211 AGTATGGAGCTGAATACTCTTAAACA 57.921 34.615 10.73 0.00 35.18 2.83
5281 5599 5.538433 AGGAGAGAAGTATGGAGCTGAATAC 59.462 44.000 0.00 0.00 0.00 1.89
5283 5601 4.555689 AGGAGAGAAGTATGGAGCTGAAT 58.444 43.478 0.00 0.00 0.00 2.57
5284 5602 3.987745 AGGAGAGAAGTATGGAGCTGAA 58.012 45.455 0.00 0.00 0.00 3.02
5286 5604 4.751767 AAAGGAGAGAAGTATGGAGCTG 57.248 45.455 0.00 0.00 0.00 4.24
5320 5638 5.201713 TCCAACAGAGAGAGTAAAGTGTG 57.798 43.478 0.00 0.00 0.00 3.82


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.