Multiple sequence alignment - TraesCS4A01G389300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G389300 chr4A 100.000 4323 0 0 1 4323 666941608 666937286 0.000000e+00 7984.0
1 TraesCS4A01G389300 chr4A 79.203 1832 247 81 908 2672 59282527 59284291 0.000000e+00 1149.0
2 TraesCS4A01G389300 chr4A 80.984 305 45 12 3037 3332 59285093 59285393 3.360000e-56 230.0
3 TraesCS4A01G389300 chr4A 89.855 69 4 3 3787 3854 475917428 475917362 7.700000e-13 86.1
4 TraesCS4A01G389300 chr7D 88.627 2462 178 43 1747 4176 52333415 52331024 0.000000e+00 2902.0
5 TraesCS4A01G389300 chr7D 85.941 882 75 28 830 1690 52334371 52333518 0.000000e+00 896.0
6 TraesCS4A01G389300 chr7D 87.783 663 63 13 1 651 52335025 52334369 0.000000e+00 760.0
7 TraesCS4A01G389300 chr7D 84.404 109 15 2 55 161 52245733 52245625 5.910000e-19 106.0
8 TraesCS4A01G389300 chr7D 89.286 56 4 2 3800 3854 135446801 135446747 7.760000e-08 69.4
9 TraesCS4A01G389300 chr7A 86.034 1654 124 44 847 2442 54838927 54837323 0.000000e+00 1676.0
10 TraesCS4A01G389300 chr7A 90.109 1284 80 21 2804 4067 54833690 54832434 0.000000e+00 1624.0
11 TraesCS4A01G389300 chr7A 97.938 388 5 2 2430 2817 54834098 54833714 0.000000e+00 669.0
12 TraesCS4A01G389300 chr7A 93.651 63 1 3 3794 3854 68229097 68229036 1.660000e-14 91.6
13 TraesCS4A01G389300 chr7A 84.286 70 9 2 3786 3854 110822411 110822479 2.790000e-07 67.6
14 TraesCS4A01G389300 chr2D 80.615 2146 265 86 908 2993 647967945 647969999 0.000000e+00 1519.0
15 TraesCS4A01G389300 chr2D 76.842 475 87 17 1711 2178 107865773 107866231 3.340000e-61 246.0
16 TraesCS4A01G389300 chr2B 80.632 2153 251 94 908 2982 781832746 781830682 0.000000e+00 1513.0
17 TraesCS4A01G389300 chr2B 87.975 158 12 4 670 827 371564852 371564702 3.430000e-41 180.0
18 TraesCS4A01G389300 chr2B 89.706 136 12 2 688 823 664210548 664210415 5.750000e-39 172.0
19 TraesCS4A01G389300 chr2B 89.000 100 10 1 724 823 708435251 708435349 5.870000e-24 122.0
20 TraesCS4A01G389300 chr2B 92.727 55 2 2 3800 3853 97387850 97387903 1.290000e-10 78.7
21 TraesCS4A01G389300 chrUn 80.522 2146 261 94 908 2996 31375140 31373095 0.000000e+00 1502.0
22 TraesCS4A01G389300 chr4D 80.115 1921 240 82 908 2763 401531380 401533223 0.000000e+00 1301.0
23 TraesCS4A01G389300 chr4D 81.494 308 48 7 3039 3339 401533517 401533822 1.200000e-60 244.0
24 TraesCS4A01G389300 chr4D 88.571 175 18 2 2820 2993 401533337 401533510 1.220000e-50 211.0
25 TraesCS4A01G389300 chr4B 79.723 1588 221 58 908 2455 496547551 496549077 0.000000e+00 1055.0
26 TraesCS4A01G389300 chr4B 83.264 239 24 7 2529 2763 496549249 496549475 5.670000e-49 206.0
27 TraesCS4A01G389300 chr4B 87.500 176 19 3 2820 2993 496549590 496549764 2.640000e-47 200.0
28 TraesCS4A01G389300 chr4B 88.312 154 13 3 670 823 104813071 104812923 3.430000e-41 180.0
29 TraesCS4A01G389300 chr4B 88.312 154 12 3 670 823 104815713 104815566 3.430000e-41 180.0
30 TraesCS4A01G389300 chr4B 85.629 167 13 7 670 831 381111406 381111566 9.620000e-37 165.0
31 TraesCS4A01G389300 chr4B 85.000 140 16 3 3198 3332 496550001 496550140 2.100000e-28 137.0
32 TraesCS4A01G389300 chr1B 86.145 166 14 4 670 831 483598648 483598808 2.070000e-38 171.0
33 TraesCS4A01G389300 chr1B 88.889 54 6 0 3800 3853 510600380 510600327 2.790000e-07 67.6
34 TraesCS4A01G389300 chr7B 89.130 138 10 4 696 833 687432172 687432040 2.670000e-37 167.0
35 TraesCS4A01G389300 chr5B 82.443 131 16 4 670 798 11309492 11309367 1.640000e-19 108.0
36 TraesCS4A01G389300 chr3D 94.545 55 3 0 487 541 452820183 452820237 7.700000e-13 86.1
37 TraesCS4A01G389300 chr5A 84.507 71 5 4 3787 3854 411475048 411475115 1.000000e-06 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G389300 chr4A 666937286 666941608 4322 True 7984.000000 7984 100.000000 1 4323 1 chr4A.!!$R2 4322
1 TraesCS4A01G389300 chr4A 59282527 59285393 2866 False 689.500000 1149 80.093500 908 3332 2 chr4A.!!$F1 2424
2 TraesCS4A01G389300 chr7D 52331024 52335025 4001 True 1519.333333 2902 87.450333 1 4176 3 chr7D.!!$R3 4175
3 TraesCS4A01G389300 chr7A 54832434 54838927 6493 True 1323.000000 1676 91.360333 847 4067 3 chr7A.!!$R2 3220
4 TraesCS4A01G389300 chr2D 647967945 647969999 2054 False 1519.000000 1519 80.615000 908 2993 1 chr2D.!!$F2 2085
5 TraesCS4A01G389300 chr2B 781830682 781832746 2064 True 1513.000000 1513 80.632000 908 2982 1 chr2B.!!$R3 2074
6 TraesCS4A01G389300 chrUn 31373095 31375140 2045 True 1502.000000 1502 80.522000 908 2996 1 chrUn.!!$R1 2088
7 TraesCS4A01G389300 chr4D 401531380 401533822 2442 False 585.333333 1301 83.393333 908 3339 3 chr4D.!!$F1 2431
8 TraesCS4A01G389300 chr4B 496547551 496550140 2589 False 399.500000 1055 83.871750 908 3332 4 chr4B.!!$F2 2424

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
151 153 0.249657 GCTCATTAGTCTCTGGGCGG 60.250 60.0 0.0 0.0 0.0 6.13 F
669 705 0.253610 TATTGGGGCGGACAAATCGT 59.746 50.0 0.0 0.0 0.0 3.73 F
1693 1861 0.321210 TATGTCGTGTGGGGTTGCAG 60.321 55.0 0.0 0.0 0.0 4.41 F
1700 1868 0.478072 TGTGGGGTTGCAGATGAGTT 59.522 50.0 0.0 0.0 0.0 3.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1159 1257 0.037605 ACACGAGAATCCCACGGAAC 60.038 55.000 0.00 0.0 34.34 3.62 R
1836 2056 0.175989 AGTAAAGAGGTAGCAGCGGC 59.824 55.000 0.00 0.0 41.61 6.53 R
2678 6283 1.842562 CATCCAGGGATGTCCTCAACT 59.157 52.381 18.22 0.0 46.12 3.16 R
3437 7661 2.158813 ACACACAATCTCAAGGAACGGT 60.159 45.455 0.00 0.0 0.00 4.83 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 5.651530 TGTGAGAGGAGACGAACATAATTC 58.348 41.667 0.00 0.00 0.00 2.17
37 38 5.008019 AGACGAACATAATTCATGGATGTGC 59.992 40.000 0.00 0.00 39.13 4.57
101 103 4.264253 AGAGCATGGTCGATGAATTTCAA 58.736 39.130 18.64 0.00 33.31 2.69
119 121 7.707624 ATTTCAACTTCAGAAAGCATATGGA 57.292 32.000 4.56 0.00 38.27 3.41
120 122 6.748333 TTCAACTTCAGAAAGCATATGGAG 57.252 37.500 4.56 0.00 35.81 3.86
121 123 5.188434 TCAACTTCAGAAAGCATATGGAGG 58.812 41.667 4.56 0.00 35.81 4.30
122 124 5.045651 TCAACTTCAGAAAGCATATGGAGGA 60.046 40.000 4.56 0.00 35.81 3.71
123 125 5.441718 ACTTCAGAAAGCATATGGAGGAA 57.558 39.130 4.56 0.00 35.81 3.36
124 126 5.819991 ACTTCAGAAAGCATATGGAGGAAA 58.180 37.500 4.56 0.00 35.81 3.13
125 127 6.430007 ACTTCAGAAAGCATATGGAGGAAAT 58.570 36.000 4.56 0.00 35.81 2.17
126 128 6.320672 ACTTCAGAAAGCATATGGAGGAAATG 59.679 38.462 4.56 0.00 35.81 2.32
127 129 5.759059 TCAGAAAGCATATGGAGGAAATGT 58.241 37.500 4.56 0.00 0.00 2.71
128 130 6.189859 TCAGAAAGCATATGGAGGAAATGTT 58.810 36.000 4.56 0.00 0.00 2.71
129 131 6.664816 TCAGAAAGCATATGGAGGAAATGTTT 59.335 34.615 4.56 0.00 0.00 2.83
130 132 6.755141 CAGAAAGCATATGGAGGAAATGTTTG 59.245 38.462 4.56 0.00 0.00 2.93
131 133 4.660789 AGCATATGGAGGAAATGTTTGC 57.339 40.909 4.56 0.00 0.00 3.68
132 134 3.067180 AGCATATGGAGGAAATGTTTGCG 59.933 43.478 4.56 0.00 33.38 4.85
133 135 3.374745 CATATGGAGGAAATGTTTGCGC 58.625 45.455 0.00 0.00 33.38 6.09
134 136 1.549203 ATGGAGGAAATGTTTGCGCT 58.451 45.000 9.73 0.00 33.38 5.92
135 137 0.881118 TGGAGGAAATGTTTGCGCTC 59.119 50.000 9.73 0.00 33.38 5.03
136 138 0.881118 GGAGGAAATGTTTGCGCTCA 59.119 50.000 9.73 5.93 33.38 4.26
137 139 1.474077 GGAGGAAATGTTTGCGCTCAT 59.526 47.619 9.73 8.20 33.38 2.90
138 140 2.094545 GGAGGAAATGTTTGCGCTCATT 60.095 45.455 9.73 13.81 36.07 2.57
139 141 3.128589 GGAGGAAATGTTTGCGCTCATTA 59.871 43.478 19.71 1.48 34.45 1.90
140 142 4.346129 GAGGAAATGTTTGCGCTCATTAG 58.654 43.478 19.71 0.00 34.45 1.73
141 143 3.758554 AGGAAATGTTTGCGCTCATTAGT 59.241 39.130 19.71 10.22 34.45 2.24
142 144 4.098416 GGAAATGTTTGCGCTCATTAGTC 58.902 43.478 19.71 15.70 34.45 2.59
143 145 4.142600 GGAAATGTTTGCGCTCATTAGTCT 60.143 41.667 19.71 9.44 34.45 3.24
144 146 4.606457 AATGTTTGCGCTCATTAGTCTC 57.394 40.909 18.62 0.00 33.32 3.36
145 147 3.319137 TGTTTGCGCTCATTAGTCTCT 57.681 42.857 9.73 0.00 0.00 3.10
146 148 2.995939 TGTTTGCGCTCATTAGTCTCTG 59.004 45.455 9.73 0.00 0.00 3.35
151 153 0.249657 GCTCATTAGTCTCTGGGCGG 60.250 60.000 0.00 0.00 0.00 6.13
158 160 1.456705 GTCTCTGGGCGGGAGATCT 60.457 63.158 10.38 0.00 41.13 2.75
164 166 1.330655 TGGGCGGGAGATCTTCTCAC 61.331 60.000 0.00 1.93 45.12 3.51
209 245 4.672409 TGTACTATGCACTGATGTCTTCG 58.328 43.478 0.00 0.00 0.00 3.79
215 251 4.983671 TGCACTGATGTCTTCGTATAGT 57.016 40.909 0.00 0.00 0.00 2.12
231 267 7.181143 TCGTATAGTTGAGGTTTGTTTTGAC 57.819 36.000 0.00 0.00 0.00 3.18
292 328 4.632251 ACGATAATGAACGTGCCATTGTAA 59.368 37.500 20.27 6.90 41.17 2.41
307 343 5.107375 GCCATTGTAAGCATGTCAAAAGTTG 60.107 40.000 0.00 0.00 0.00 3.16
308 344 5.984926 CCATTGTAAGCATGTCAAAAGTTGT 59.015 36.000 0.00 0.00 0.00 3.32
309 345 7.144661 CCATTGTAAGCATGTCAAAAGTTGTA 58.855 34.615 0.00 0.00 0.00 2.41
311 347 6.935741 TGTAAGCATGTCAAAAGTTGTAGT 57.064 33.333 0.00 0.00 0.00 2.73
312 348 7.328277 TGTAAGCATGTCAAAAGTTGTAGTT 57.672 32.000 0.00 0.00 0.00 2.24
333 369 6.931838 AGTTGTATCGACATCAAAAGGAGTA 58.068 36.000 0.00 0.00 34.86 2.59
364 400 5.069318 TGTGGCAACTTGATTATTCACTCA 58.931 37.500 0.00 0.00 37.61 3.41
366 402 4.156556 TGGCAACTTGATTATTCACTCAGC 59.843 41.667 0.00 0.00 37.61 4.26
391 427 7.171337 GCTGCAACTTTTAAGATGATTTTTCCA 59.829 33.333 4.19 0.00 31.18 3.53
392 428 9.211485 CTGCAACTTTTAAGATGATTTTTCCAT 57.789 29.630 4.19 0.00 31.18 3.41
410 446 3.446161 TCCATCCTAACAGACACTTACGG 59.554 47.826 0.00 0.00 0.00 4.02
426 462 0.255033 ACGGGATTTAGGCCCTGTTC 59.745 55.000 0.00 0.00 43.72 3.18
437 473 2.203280 CCTGTTCGGCAACCCACA 60.203 61.111 0.00 0.00 0.00 4.17
442 478 1.077357 TTCGGCAACCCACACACTT 60.077 52.632 0.00 0.00 0.00 3.16
493 529 3.433615 GCTTCGTGATTTTCTACTGCAGT 59.566 43.478 25.12 25.12 0.00 4.40
496 532 3.994392 TCGTGATTTTCTACTGCAGTTCC 59.006 43.478 27.06 8.27 0.00 3.62
551 587 2.536761 TTCCGAACAGGGTGTTAGTG 57.463 50.000 0.00 0.00 41.28 2.74
581 617 4.079253 TCTGGTCCTGCTAAAATCAAACC 58.921 43.478 0.00 0.00 0.00 3.27
587 623 5.048083 GTCCTGCTAAAATCAAACCATGACA 60.048 40.000 0.00 0.00 41.93 3.58
599 635 5.178623 TCAAACCATGACAGACAAATCGTAC 59.821 40.000 0.00 0.00 31.50 3.67
636 672 9.356929 GCGATTTGAAAGTTAACAAAATTTCAG 57.643 29.630 15.91 9.23 41.28 3.02
659 695 8.356657 TCAGAAAATAACATTTATATTGGGGCG 58.643 33.333 0.00 0.00 0.00 6.13
660 696 7.598493 CAGAAAATAACATTTATATTGGGGCGG 59.402 37.037 0.00 0.00 0.00 6.13
661 697 7.507616 AGAAAATAACATTTATATTGGGGCGGA 59.492 33.333 0.00 0.00 0.00 5.54
662 698 6.584185 AATAACATTTATATTGGGGCGGAC 57.416 37.500 0.00 0.00 0.00 4.79
663 699 3.586470 ACATTTATATTGGGGCGGACA 57.414 42.857 0.00 0.00 0.00 4.02
664 700 3.904717 ACATTTATATTGGGGCGGACAA 58.095 40.909 0.00 0.00 0.00 3.18
665 701 4.282496 ACATTTATATTGGGGCGGACAAA 58.718 39.130 0.00 0.00 0.00 2.83
666 702 4.898861 ACATTTATATTGGGGCGGACAAAT 59.101 37.500 0.00 0.00 0.00 2.32
667 703 5.010617 ACATTTATATTGGGGCGGACAAATC 59.989 40.000 0.00 0.00 0.00 2.17
668 704 1.604604 ATATTGGGGCGGACAAATCG 58.395 50.000 0.00 0.00 0.00 3.34
669 705 0.253610 TATTGGGGCGGACAAATCGT 59.746 50.000 0.00 0.00 0.00 3.73
670 706 0.253610 ATTGGGGCGGACAAATCGTA 59.746 50.000 0.00 0.00 0.00 3.43
671 707 0.253610 TTGGGGCGGACAAATCGTAT 59.746 50.000 0.00 0.00 0.00 3.06
672 708 0.462937 TGGGGCGGACAAATCGTATG 60.463 55.000 0.00 0.00 0.00 2.39
673 709 0.463116 GGGGCGGACAAATCGTATGT 60.463 55.000 0.00 0.00 0.00 2.29
674 710 0.935196 GGGCGGACAAATCGTATGTC 59.065 55.000 8.72 8.72 45.08 3.06
688 724 9.586150 CAAATCGTATGTCACATCTAATTAAGC 57.414 33.333 0.00 0.00 0.00 3.09
689 725 8.887036 AATCGTATGTCACATCTAATTAAGCA 57.113 30.769 0.00 0.00 0.00 3.91
690 726 9.494271 AATCGTATGTCACATCTAATTAAGCAT 57.506 29.630 0.00 0.00 0.00 3.79
691 727 8.298030 TCGTATGTCACATCTAATTAAGCATG 57.702 34.615 0.00 0.00 0.00 4.06
692 728 8.141268 TCGTATGTCACATCTAATTAAGCATGA 58.859 33.333 0.00 0.00 0.00 3.07
693 729 8.217115 CGTATGTCACATCTAATTAAGCATGAC 58.783 37.037 0.00 10.49 34.32 3.06
694 730 9.045223 GTATGTCACATCTAATTAAGCATGACA 57.955 33.333 17.67 17.67 41.33 3.58
695 731 8.687292 ATGTCACATCTAATTAAGCATGACAT 57.313 30.769 19.52 19.52 41.70 3.06
696 732 8.146479 TGTCACATCTAATTAAGCATGACATC 57.854 34.615 13.96 0.00 36.73 3.06
697 733 7.769970 TGTCACATCTAATTAAGCATGACATCA 59.230 33.333 13.96 0.00 36.73 3.07
698 734 8.066595 GTCACATCTAATTAAGCATGACATCAC 58.933 37.037 0.00 0.00 34.10 3.06
699 735 7.769970 TCACATCTAATTAAGCATGACATCACA 59.230 33.333 0.00 0.00 0.00 3.58
700 736 7.854422 CACATCTAATTAAGCATGACATCACAC 59.146 37.037 0.00 0.00 0.00 3.82
701 737 7.553760 ACATCTAATTAAGCATGACATCACACA 59.446 33.333 0.00 0.00 0.00 3.72
702 738 7.920160 TCTAATTAAGCATGACATCACACAA 57.080 32.000 0.00 0.00 0.00 3.33
703 739 7.751732 TCTAATTAAGCATGACATCACACAAC 58.248 34.615 0.00 0.00 0.00 3.32
704 740 5.963176 ATTAAGCATGACATCACACAACA 57.037 34.783 0.00 0.00 0.00 3.33
705 741 5.963176 TTAAGCATGACATCACACAACAT 57.037 34.783 0.00 0.00 0.00 2.71
706 742 4.430137 AAGCATGACATCACACAACATC 57.570 40.909 0.00 0.00 0.00 3.06
707 743 3.414269 AGCATGACATCACACAACATCA 58.586 40.909 0.00 0.00 0.00 3.07
708 744 3.439129 AGCATGACATCACACAACATCAG 59.561 43.478 0.00 0.00 0.00 2.90
709 745 3.189910 GCATGACATCACACAACATCAGT 59.810 43.478 0.00 0.00 0.00 3.41
710 746 4.392754 GCATGACATCACACAACATCAGTA 59.607 41.667 0.00 0.00 0.00 2.74
711 747 5.106594 GCATGACATCACACAACATCAGTAA 60.107 40.000 0.00 0.00 0.00 2.24
712 748 6.568271 GCATGACATCACACAACATCAGTAAA 60.568 38.462 0.00 0.00 0.00 2.01
713 749 6.934048 TGACATCACACAACATCAGTAAAA 57.066 33.333 0.00 0.00 0.00 1.52
714 750 7.326968 TGACATCACACAACATCAGTAAAAA 57.673 32.000 0.00 0.00 0.00 1.94
753 789 9.772973 AACACTTTTTATAAATCTTGAAACCCC 57.227 29.630 0.00 0.00 0.00 4.95
754 790 9.154632 ACACTTTTTATAAATCTTGAAACCCCT 57.845 29.630 0.00 0.00 0.00 4.79
755 791 9.996554 CACTTTTTATAAATCTTGAAACCCCTT 57.003 29.630 0.00 0.00 0.00 3.95
764 800 8.893563 AAATCTTGAAACCCCTTATTATGTGA 57.106 30.769 0.00 0.00 0.00 3.58
765 801 9.492730 AAATCTTGAAACCCCTTATTATGTGAT 57.507 29.630 0.00 0.00 0.00 3.06
766 802 7.880160 TCTTGAAACCCCTTATTATGTGATG 57.120 36.000 0.00 0.00 0.00 3.07
767 803 7.638444 TCTTGAAACCCCTTATTATGTGATGA 58.362 34.615 0.00 0.00 0.00 2.92
768 804 8.112822 TCTTGAAACCCCTTATTATGTGATGAA 58.887 33.333 0.00 0.00 0.00 2.57
769 805 7.639113 TGAAACCCCTTATTATGTGATGAAC 57.361 36.000 0.00 0.00 0.00 3.18
770 806 7.410174 TGAAACCCCTTATTATGTGATGAACT 58.590 34.615 0.00 0.00 0.00 3.01
771 807 8.553153 TGAAACCCCTTATTATGTGATGAACTA 58.447 33.333 0.00 0.00 0.00 2.24
772 808 8.747538 AAACCCCTTATTATGTGATGAACTAC 57.252 34.615 0.00 0.00 0.00 2.73
773 809 7.691993 ACCCCTTATTATGTGATGAACTACT 57.308 36.000 0.00 0.00 0.00 2.57
774 810 8.102484 ACCCCTTATTATGTGATGAACTACTT 57.898 34.615 0.00 0.00 0.00 2.24
775 811 9.220906 ACCCCTTATTATGTGATGAACTACTTA 57.779 33.333 0.00 0.00 0.00 2.24
776 812 9.712305 CCCCTTATTATGTGATGAACTACTTAG 57.288 37.037 0.00 0.00 0.00 2.18
783 819 9.803315 TTATGTGATGAACTACTTAGATGTGAC 57.197 33.333 0.00 0.00 0.00 3.67
784 820 7.227049 TGTGATGAACTACTTAGATGTGACA 57.773 36.000 0.00 0.00 0.00 3.58
785 821 7.840931 TGTGATGAACTACTTAGATGTGACAT 58.159 34.615 0.00 0.00 0.00 3.06
786 822 7.976175 TGTGATGAACTACTTAGATGTGACATC 59.024 37.037 17.46 17.46 33.46 3.06
787 823 8.194104 GTGATGAACTACTTAGATGTGACATCT 58.806 37.037 28.69 28.69 33.72 2.90
788 824 8.753133 TGATGAACTACTTAGATGTGACATCTT 58.247 33.333 30.49 16.88 33.72 2.40
823 859 8.710551 CATCTAGATGTGAATTAGTCATTCTGC 58.289 37.037 22.42 0.00 41.91 4.26
824 860 7.785033 TCTAGATGTGAATTAGTCATTCTGCA 58.215 34.615 7.87 0.00 41.91 4.41
825 861 8.427276 TCTAGATGTGAATTAGTCATTCTGCAT 58.573 33.333 7.87 3.82 41.91 3.96
826 862 7.876936 AGATGTGAATTAGTCATTCTGCATT 57.123 32.000 0.00 0.00 41.91 3.56
827 863 8.289939 AGATGTGAATTAGTCATTCTGCATTT 57.710 30.769 0.00 0.00 41.91 2.32
828 864 9.399797 AGATGTGAATTAGTCATTCTGCATTTA 57.600 29.630 0.00 0.00 41.91 1.40
842 878 7.739022 TTCTGCATTTATATTGTGCGAAAAG 57.261 32.000 0.00 0.00 41.61 2.27
868 905 1.461237 CGTTCGCGCGTATTGACTTTT 60.461 47.619 30.98 0.00 0.00 2.27
869 906 1.896193 GTTCGCGCGTATTGACTTTTG 59.104 47.619 30.98 0.00 0.00 2.44
879 916 4.167597 GACTTTTGTCCGCCCCAA 57.832 55.556 0.00 0.00 43.37 4.12
895 932 1.414061 CCAAGCATCGATCCCCCTCT 61.414 60.000 0.00 0.00 0.00 3.69
1159 1257 1.341606 GCTCTCGTTCCAGTTTCTCG 58.658 55.000 0.00 0.00 0.00 4.04
1203 1331 6.889722 TGGGTTAAGATCTAATTTCCCACTTG 59.110 38.462 15.42 0.00 38.70 3.16
1211 1339 3.874392 AATTTCCCACTTGCTGTATGC 57.126 42.857 0.00 0.00 43.25 3.14
1496 1631 1.300697 GAGAACGGTCTGGTTGCGT 60.301 57.895 8.28 0.00 32.80 5.24
1501 1636 1.287815 CGGTCTGGTTGCGTACAGA 59.712 57.895 0.00 0.54 41.13 3.41
1504 1639 2.423577 GGTCTGGTTGCGTACAGAAAT 58.576 47.619 5.73 0.00 44.53 2.17
1542 1677 2.476619 CGCAAGTAAGTCTTCACCACAG 59.523 50.000 0.00 0.00 33.63 3.66
1543 1678 3.467803 GCAAGTAAGTCTTCACCACAGT 58.532 45.455 0.00 0.00 33.63 3.55
1545 1680 4.058817 CAAGTAAGTCTTCACCACAGTCC 58.941 47.826 0.00 0.00 33.63 3.85
1546 1681 3.305720 AGTAAGTCTTCACCACAGTCCA 58.694 45.455 0.00 0.00 0.00 4.02
1547 1682 2.622064 AAGTCTTCACCACAGTCCAC 57.378 50.000 0.00 0.00 0.00 4.02
1548 1683 1.496060 AGTCTTCACCACAGTCCACA 58.504 50.000 0.00 0.00 0.00 4.17
1554 1689 3.120321 TCACCACAGTCCACATTGTAC 57.880 47.619 0.00 0.00 0.00 2.90
1573 1716 7.737972 TTGTACATGTACACTGTTTTAGCAT 57.262 32.000 33.03 0.00 44.81 3.79
1578 1721 6.486657 ACATGTACACTGTTTTAGCATGAACT 59.513 34.615 0.00 0.00 36.65 3.01
1581 1724 8.083462 TGTACACTGTTTTAGCATGAACTTAG 57.917 34.615 0.00 0.00 0.00 2.18
1583 1726 9.199982 GTACACTGTTTTAGCATGAACTTAGTA 57.800 33.333 0.00 0.00 0.00 1.82
1602 1761 7.553044 ACTTAGTAAGTTGCATAAAGATCCACC 59.447 37.037 9.85 0.00 39.04 4.61
1613 1772 7.178983 TGCATAAAGATCCACCTCTGAATTTTT 59.821 33.333 0.00 0.00 0.00 1.94
1621 1780 2.893489 ACCTCTGAATTTTTCCTGGTGC 59.107 45.455 0.00 0.00 0.00 5.01
1630 1798 3.557903 TTCCTGGTGCTGCAGAGCC 62.558 63.158 20.43 18.34 45.57 4.70
1657 1825 3.632333 ACGTATCTTGGAGATGACCAGA 58.368 45.455 0.82 0.00 41.19 3.86
1673 1841 5.464069 TGACCAGATTAAGGTGAGCCTATA 58.536 41.667 0.00 0.00 46.33 1.31
1674 1842 6.084738 TGACCAGATTAAGGTGAGCCTATAT 58.915 40.000 0.00 0.00 46.33 0.86
1675 1843 7.246027 TGACCAGATTAAGGTGAGCCTATATA 58.754 38.462 0.00 0.00 46.33 0.86
1676 1844 7.901322 TGACCAGATTAAGGTGAGCCTATATAT 59.099 37.037 0.00 0.00 46.33 0.86
1686 1854 3.509967 TGAGCCTATATATGTCGTGTGGG 59.490 47.826 0.00 0.00 0.00 4.61
1690 1858 4.566004 CCTATATATGTCGTGTGGGGTTG 58.434 47.826 0.00 0.00 0.00 3.77
1691 1859 2.319136 TATATGTCGTGTGGGGTTGC 57.681 50.000 0.00 0.00 0.00 4.17
1692 1860 0.326595 ATATGTCGTGTGGGGTTGCA 59.673 50.000 0.00 0.00 0.00 4.08
1693 1861 0.321210 TATGTCGTGTGGGGTTGCAG 60.321 55.000 0.00 0.00 0.00 4.41
1694 1862 2.050836 ATGTCGTGTGGGGTTGCAGA 62.051 55.000 0.00 0.00 0.00 4.26
1696 1864 1.302431 TCGTGTGGGGTTGCAGATG 60.302 57.895 0.00 0.00 0.00 2.90
1697 1865 1.302431 CGTGTGGGGTTGCAGATGA 60.302 57.895 0.00 0.00 0.00 2.92
1700 1868 0.478072 TGTGGGGTTGCAGATGAGTT 59.522 50.000 0.00 0.00 0.00 3.01
1701 1869 1.133513 TGTGGGGTTGCAGATGAGTTT 60.134 47.619 0.00 0.00 0.00 2.66
1705 1888 1.464997 GGGTTGCAGATGAGTTTCGAC 59.535 52.381 0.00 0.00 0.00 4.20
1708 1891 3.120511 GGTTGCAGATGAGTTTCGACTTC 60.121 47.826 0.00 0.00 0.00 3.01
1728 1912 1.270518 CCGAGGCCTTGATAGTGATGG 60.271 57.143 22.68 0.00 0.00 3.51
1796 2016 1.372997 CGCGGACTTGGATATCCCG 60.373 63.158 19.34 15.03 42.74 5.14
1811 2031 3.644966 ATCCCGATTAAAAGGTCAGCA 57.355 42.857 0.00 0.00 0.00 4.41
1813 2033 1.743394 CCCGATTAAAAGGTCAGCACC 59.257 52.381 0.00 0.00 44.19 5.01
1826 2046 2.548057 GTCAGCACCGAATTCTGTTCAA 59.452 45.455 3.52 0.00 0.00 2.69
1830 2050 4.984161 CAGCACCGAATTCTGTTCAAAAAT 59.016 37.500 3.52 0.00 0.00 1.82
1836 2056 5.118510 CCGAATTCTGTTCAAAAATTTCCCG 59.881 40.000 3.52 0.00 0.00 5.14
1860 2080 2.233922 GCTGCTACCTCTTTACTGACCA 59.766 50.000 0.00 0.00 0.00 4.02
1861 2086 3.118592 GCTGCTACCTCTTTACTGACCAT 60.119 47.826 0.00 0.00 0.00 3.55
1946 2172 3.436243 AGGGAGGAACTGTAGTCAAGAG 58.564 50.000 0.00 0.00 41.55 2.85
1984 2210 5.907207 TGAGAAGTATGATAAGGTGCAGAC 58.093 41.667 0.00 0.00 0.00 3.51
1985 2211 5.163405 TGAGAAGTATGATAAGGTGCAGACC 60.163 44.000 0.00 0.00 43.52 3.85
1995 2221 1.873698 GGTGCAGACCGTCTTGTAAA 58.126 50.000 0.00 0.00 30.61 2.01
1997 2223 2.032290 GGTGCAGACCGTCTTGTAAAAC 60.032 50.000 0.00 0.00 30.61 2.43
1999 2225 2.610374 TGCAGACCGTCTTGTAAAACAC 59.390 45.455 0.00 0.00 0.00 3.32
2001 2227 3.064271 GCAGACCGTCTTGTAAAACACAA 59.936 43.478 0.00 0.00 44.97 3.33
2034 2260 6.504279 ACTTCTAATCAGAAAGGGGAAAGGTA 59.496 38.462 0.00 0.00 40.28 3.08
2035 2261 6.309389 TCTAATCAGAAAGGGGAAAGGTAC 57.691 41.667 0.00 0.00 0.00 3.34
2041 2269 4.948004 CAGAAAGGGGAAAGGTACCATTAC 59.052 45.833 15.94 9.40 29.48 1.89
2094 2323 1.135721 AGGTACATAACGTTCGGCCTC 59.864 52.381 2.82 0.00 0.00 4.70
2108 2337 1.207089 CGGCCTCAAATGGTCTCAGTA 59.793 52.381 0.00 0.00 0.00 2.74
2117 2346 3.851976 ATGGTCTCAGTACTTCGTGAC 57.148 47.619 0.00 0.00 0.00 3.67
2124 2353 6.204359 GTCTCAGTACTTCGTGACAAGTTTA 58.796 40.000 9.39 0.00 37.75 2.01
2179 2408 7.553044 AGGGCAGATTAGTTTTGATGTAAGTAC 59.447 37.037 0.00 0.00 0.00 2.73
2190 2422 9.659830 GTTTTGATGTAAGTACTGTAAACCAAG 57.340 33.333 0.00 0.00 0.00 3.61
2198 2431 9.310716 GTAAGTACTGTAAACCAAGACATATCC 57.689 37.037 0.00 0.00 0.00 2.59
2203 2436 6.169557 TGTAAACCAAGACATATCCGCTAT 57.830 37.500 0.00 0.00 0.00 2.97
2383 2618 4.843728 CAGTGCTCCCAAGGTAAGAAATA 58.156 43.478 0.00 0.00 0.00 1.40
2462 5942 3.472652 TCAAGCCACTGTTAACGACATT 58.527 40.909 0.26 0.00 37.69 2.71
2495 6076 7.928908 TTACTACAAACTTAACTGTACCGTG 57.071 36.000 0.00 0.00 0.00 4.94
2870 6996 3.874392 ATTTGGTATTGTGCTCAAGCC 57.126 42.857 14.35 14.35 41.18 4.35
2871 6997 2.284754 TTGGTATTGTGCTCAAGCCA 57.715 45.000 17.96 17.96 39.18 4.75
2947 7074 1.271379 TGGCTGCCAGAAACTACCTTC 60.271 52.381 19.30 0.00 0.00 3.46
2975 7103 6.437477 ACCATCATAGCTAATCATCGGAGTAA 59.563 38.462 0.00 0.00 0.00 2.24
3007 7135 4.935352 AAGTCATGTTAAAAGCTGCCAA 57.065 36.364 0.00 0.00 0.00 4.52
3040 7168 1.552337 CACCATCACAGCTGTAGTCCT 59.448 52.381 21.20 0.00 0.00 3.85
3050 7178 3.006323 CAGCTGTAGTCCTTGAAGAGTGT 59.994 47.826 5.25 0.00 0.00 3.55
3061 7189 2.609747 TGAAGAGTGTACCTCAGGCTT 58.390 47.619 12.18 0.00 43.12 4.35
3121 7251 3.567164 ACTCCTTCAGAAACATTGCACAG 59.433 43.478 0.00 0.00 0.00 3.66
3132 7262 1.274167 CATTGCACAGCTCCCATTGTT 59.726 47.619 0.00 0.00 0.00 2.83
3143 7356 5.016173 AGCTCCCATTGTTATTTAGTTGCA 58.984 37.500 0.00 0.00 0.00 4.08
3195 7408 4.057432 GCAATTTTAAAGCTGTTGCCTGA 58.943 39.130 13.91 0.00 39.27 3.86
3220 7434 5.053811 TCAGTTTATTCGCTGAGTTCAACA 58.946 37.500 0.00 0.00 36.89 3.33
3332 7550 4.346709 TCCTGTCAAAGTGATTACCAGACA 59.653 41.667 7.04 7.04 33.88 3.41
3333 7551 4.452455 CCTGTCAAAGTGATTACCAGACAC 59.548 45.833 4.10 0.00 32.53 3.67
3343 7561 4.042809 TGATTACCAGACACTTGTCCCATT 59.957 41.667 5.73 0.00 45.85 3.16
3403 7627 5.593502 ACTATAGTGTGCTAGGTTCAGGTAC 59.406 44.000 4.10 0.00 0.00 3.34
3417 7641 6.958192 AGGTTCAGGTACAGGAACTAGAAATA 59.042 38.462 21.09 0.00 42.07 1.40
3418 7642 7.124448 AGGTTCAGGTACAGGAACTAGAAATAG 59.876 40.741 21.09 0.00 42.07 1.73
3420 7644 6.738635 TCAGGTACAGGAACTAGAAATAGGA 58.261 40.000 0.00 0.00 36.02 2.94
3422 7646 7.676893 TCAGGTACAGGAACTAGAAATAGGAAA 59.323 37.037 0.00 0.00 36.02 3.13
3423 7647 7.982354 CAGGTACAGGAACTAGAAATAGGAAAG 59.018 40.741 0.00 0.00 36.02 2.62
3457 7681 2.494059 ACCGTTCCTTGAGATTGTGTG 58.506 47.619 0.00 0.00 0.00 3.82
3468 7692 6.294899 CCTTGAGATTGTGTGTTTCATCCAAT 60.295 38.462 0.00 0.00 0.00 3.16
3498 7722 8.723942 ACTATTCTTGATACACATGGTCTTTC 57.276 34.615 0.00 0.00 0.00 2.62
3499 7723 6.668541 ATTCTTGATACACATGGTCTTTCG 57.331 37.500 0.00 0.00 0.00 3.46
3500 7724 5.147330 TCTTGATACACATGGTCTTTCGT 57.853 39.130 0.00 0.00 0.00 3.85
3502 7726 6.693466 TCTTGATACACATGGTCTTTCGTTA 58.307 36.000 0.00 0.00 0.00 3.18
3503 7727 7.327975 TCTTGATACACATGGTCTTTCGTTAT 58.672 34.615 0.00 0.00 0.00 1.89
3504 7728 6.902224 TGATACACATGGTCTTTCGTTATG 57.098 37.500 0.00 0.00 0.00 1.90
3507 7731 3.008594 ACACATGGTCTTTCGTTATGGGA 59.991 43.478 0.00 0.00 0.00 4.37
3508 7732 3.374058 CACATGGTCTTTCGTTATGGGAC 59.626 47.826 0.00 0.00 0.00 4.46
3570 7796 6.935167 TCAGTATTTGTGAAGAGAGCATACA 58.065 36.000 0.00 0.00 0.00 2.29
3601 7827 7.013655 CCAATACTTCTATGCATGTAAGCCTTT 59.986 37.037 10.16 4.96 0.00 3.11
3639 7865 4.009675 CACTTCTCAATCCGAATCCCAAA 58.990 43.478 0.00 0.00 0.00 3.28
3641 7867 3.281727 TCTCAATCCGAATCCCAAAGG 57.718 47.619 0.00 0.00 0.00 3.11
3645 7871 3.053693 TCAATCCGAATCCCAAAGGTCAT 60.054 43.478 0.00 0.00 0.00 3.06
3673 7899 5.080969 AGCTCCAATTCCAATCAATTGTG 57.919 39.130 5.13 0.00 40.71 3.33
3692 7918 2.710220 GCACAACACATGCATGAGAA 57.290 45.000 32.75 0.00 42.88 2.87
3728 7954 8.722480 TGACATGGATTTGTCTAAGAAGTATG 57.278 34.615 0.00 0.00 45.07 2.39
3754 7980 9.768662 GATGTGGATAATTGCAAGGATTAATTT 57.231 29.630 4.94 0.00 0.00 1.82
3810 8036 0.991146 TGGGAGGCTGCATGTTAAGA 59.009 50.000 8.68 0.00 0.00 2.10
3890 8118 4.708177 TCCTGTAAGCAAGCAGATATTCC 58.292 43.478 0.00 0.00 34.87 3.01
3903 8133 4.158394 GCAGATATTCCTGTTCCAGCAAAA 59.842 41.667 0.00 0.00 36.57 2.44
3972 8206 3.450457 ACCATTTCACCTTTCAGTTTGCA 59.550 39.130 0.00 0.00 0.00 4.08
4107 8341 8.874156 AGATATAGTTCCTGTAGCAATGATCAA 58.126 33.333 0.00 0.00 0.00 2.57
4140 8374 3.126000 GTGCCACAGATCTTCAGTTAAGC 59.874 47.826 0.00 0.00 34.97 3.09
4143 8377 4.187694 CCACAGATCTTCAGTTAAGCCTC 58.812 47.826 0.00 0.00 34.97 4.70
4147 8381 6.756074 CACAGATCTTCAGTTAAGCCTCTTAG 59.244 42.308 0.00 0.00 34.97 2.18
4153 8387 7.506114 TCTTCAGTTAAGCCTCTTAGAACAAA 58.494 34.615 0.00 0.00 34.97 2.83
4158 8392 8.999431 CAGTTAAGCCTCTTAGAACAAACATAA 58.001 33.333 0.00 0.00 0.00 1.90
4160 8394 6.502136 AAGCCTCTTAGAACAAACATAAGC 57.498 37.500 0.00 0.00 0.00 3.09
4164 8398 6.598064 GCCTCTTAGAACAAACATAAGCCTAA 59.402 38.462 0.00 0.00 0.00 2.69
4183 8417 8.443953 AGCCTAATGATTCTAATTTCTCACAC 57.556 34.615 0.00 0.00 0.00 3.82
4184 8418 8.049117 AGCCTAATGATTCTAATTTCTCACACA 58.951 33.333 0.00 0.00 0.00 3.72
4185 8419 8.125448 GCCTAATGATTCTAATTTCTCACACAC 58.875 37.037 0.00 0.00 0.00 3.82
4186 8420 9.388506 CCTAATGATTCTAATTTCTCACACACT 57.611 33.333 0.00 0.00 0.00 3.55
4189 8423 7.812309 TGATTCTAATTTCTCACACACTACG 57.188 36.000 0.00 0.00 0.00 3.51
4190 8424 7.599171 TGATTCTAATTTCTCACACACTACGA 58.401 34.615 0.00 0.00 0.00 3.43
4191 8425 7.541091 TGATTCTAATTTCTCACACACTACGAC 59.459 37.037 0.00 0.00 0.00 4.34
4192 8426 5.706916 TCTAATTTCTCACACACTACGACC 58.293 41.667 0.00 0.00 0.00 4.79
4193 8427 4.330944 AATTTCTCACACACTACGACCA 57.669 40.909 0.00 0.00 0.00 4.02
4194 8428 3.364889 TTTCTCACACACTACGACCAG 57.635 47.619 0.00 0.00 0.00 4.00
4195 8429 0.596577 TCTCACACACTACGACCAGC 59.403 55.000 0.00 0.00 0.00 4.85
4196 8430 0.313987 CTCACACACTACGACCAGCA 59.686 55.000 0.00 0.00 0.00 4.41
4197 8431 0.031585 TCACACACTACGACCAGCAC 59.968 55.000 0.00 0.00 0.00 4.40
4198 8432 0.249280 CACACACTACGACCAGCACA 60.249 55.000 0.00 0.00 0.00 4.57
4199 8433 0.462375 ACACACTACGACCAGCACAA 59.538 50.000 0.00 0.00 0.00 3.33
4200 8434 0.859232 CACACTACGACCAGCACAAC 59.141 55.000 0.00 0.00 0.00 3.32
4201 8435 0.249741 ACACTACGACCAGCACAACC 60.250 55.000 0.00 0.00 0.00 3.77
4202 8436 0.249699 CACTACGACCAGCACAACCA 60.250 55.000 0.00 0.00 0.00 3.67
4203 8437 0.033504 ACTACGACCAGCACAACCAG 59.966 55.000 0.00 0.00 0.00 4.00
4204 8438 0.317160 CTACGACCAGCACAACCAGA 59.683 55.000 0.00 0.00 0.00 3.86
4205 8439 0.973632 TACGACCAGCACAACCAGAT 59.026 50.000 0.00 0.00 0.00 2.90
4206 8440 0.108585 ACGACCAGCACAACCAGATT 59.891 50.000 0.00 0.00 0.00 2.40
4207 8441 0.798776 CGACCAGCACAACCAGATTC 59.201 55.000 0.00 0.00 0.00 2.52
4208 8442 1.877680 CGACCAGCACAACCAGATTCA 60.878 52.381 0.00 0.00 0.00 2.57
4209 8443 1.808945 GACCAGCACAACCAGATTCAG 59.191 52.381 0.00 0.00 0.00 3.02
4210 8444 0.524862 CCAGCACAACCAGATTCAGC 59.475 55.000 0.00 0.00 0.00 4.26
4211 8445 1.241165 CAGCACAACCAGATTCAGCA 58.759 50.000 0.00 0.00 0.00 4.41
4212 8446 1.068748 CAGCACAACCAGATTCAGCAC 60.069 52.381 0.00 0.00 0.00 4.40
4213 8447 0.110056 GCACAACCAGATTCAGCACG 60.110 55.000 0.00 0.00 0.00 5.34
4214 8448 0.110056 CACAACCAGATTCAGCACGC 60.110 55.000 0.00 0.00 0.00 5.34
4215 8449 1.237285 ACAACCAGATTCAGCACGCC 61.237 55.000 0.00 0.00 0.00 5.68
4216 8450 1.675641 AACCAGATTCAGCACGCCC 60.676 57.895 0.00 0.00 0.00 6.13
4217 8451 2.129555 AACCAGATTCAGCACGCCCT 62.130 55.000 0.00 0.00 0.00 5.19
4218 8452 2.110967 CCAGATTCAGCACGCCCTG 61.111 63.158 0.00 0.00 0.00 4.45
4219 8453 1.078918 CAGATTCAGCACGCCCTGA 60.079 57.895 1.83 1.83 39.94 3.86
4222 8456 2.828868 TTCAGCACGCCCTGAACT 59.171 55.556 12.68 0.00 44.49 3.01
4223 8457 1.148273 TTCAGCACGCCCTGAACTT 59.852 52.632 12.68 0.00 44.49 2.66
4224 8458 0.465460 TTCAGCACGCCCTGAACTTT 60.465 50.000 12.68 0.00 44.49 2.66
4225 8459 1.165907 TCAGCACGCCCTGAACTTTG 61.166 55.000 3.39 0.00 38.81 2.77
4226 8460 1.152963 AGCACGCCCTGAACTTTGT 60.153 52.632 0.00 0.00 0.00 2.83
4227 8461 0.107831 AGCACGCCCTGAACTTTGTA 59.892 50.000 0.00 0.00 0.00 2.41
4228 8462 0.517316 GCACGCCCTGAACTTTGTAG 59.483 55.000 0.00 0.00 0.00 2.74
4229 8463 1.878953 CACGCCCTGAACTTTGTAGT 58.121 50.000 0.00 0.00 35.68 2.73
4243 8477 6.496144 ACTTTGTAGTTCTAGGTTTCCACT 57.504 37.500 0.00 0.00 0.00 4.00
4244 8478 6.896883 ACTTTGTAGTTCTAGGTTTCCACTT 58.103 36.000 0.00 0.00 0.00 3.16
4245 8479 8.026396 ACTTTGTAGTTCTAGGTTTCCACTTA 57.974 34.615 0.00 0.00 0.00 2.24
4246 8480 8.148999 ACTTTGTAGTTCTAGGTTTCCACTTAG 58.851 37.037 0.00 0.00 34.54 2.18
4247 8481 6.034161 TGTAGTTCTAGGTTTCCACTTAGC 57.966 41.667 0.00 0.00 33.49 3.09
4248 8482 5.541101 TGTAGTTCTAGGTTTCCACTTAGCA 59.459 40.000 0.00 0.00 33.49 3.49
4249 8483 5.763876 AGTTCTAGGTTTCCACTTAGCAT 57.236 39.130 0.00 0.00 33.49 3.79
4250 8484 5.735766 AGTTCTAGGTTTCCACTTAGCATC 58.264 41.667 0.00 0.00 33.49 3.91
4251 8485 5.248477 AGTTCTAGGTTTCCACTTAGCATCA 59.752 40.000 0.00 0.00 33.49 3.07
4252 8486 5.957771 TCTAGGTTTCCACTTAGCATCAT 57.042 39.130 0.00 0.00 33.49 2.45
4253 8487 5.674525 TCTAGGTTTCCACTTAGCATCATG 58.325 41.667 0.00 0.00 33.49 3.07
4254 8488 3.624777 AGGTTTCCACTTAGCATCATGG 58.375 45.455 0.00 0.00 0.00 3.66
4255 8489 3.010584 AGGTTTCCACTTAGCATCATGGT 59.989 43.478 0.00 0.00 33.67 3.55
4256 8490 3.763897 GGTTTCCACTTAGCATCATGGTT 59.236 43.478 0.00 0.00 33.67 3.67
4257 8491 4.220602 GGTTTCCACTTAGCATCATGGTTT 59.779 41.667 0.00 0.00 33.67 3.27
4258 8492 5.402398 GTTTCCACTTAGCATCATGGTTTC 58.598 41.667 0.00 0.00 33.67 2.78
4259 8493 4.299586 TCCACTTAGCATCATGGTTTCA 57.700 40.909 0.00 0.00 33.67 2.69
4260 8494 4.661222 TCCACTTAGCATCATGGTTTCAA 58.339 39.130 0.00 0.00 33.67 2.69
4261 8495 4.458989 TCCACTTAGCATCATGGTTTCAAC 59.541 41.667 0.00 0.00 33.67 3.18
4262 8496 4.460382 CCACTTAGCATCATGGTTTCAACT 59.540 41.667 0.00 0.00 0.00 3.16
4263 8497 5.396484 CACTTAGCATCATGGTTTCAACTG 58.604 41.667 0.00 0.00 0.00 3.16
4264 8498 5.048504 CACTTAGCATCATGGTTTCAACTGT 60.049 40.000 0.00 0.00 0.00 3.55
4265 8499 3.928727 AGCATCATGGTTTCAACTGTG 57.071 42.857 0.00 0.00 0.00 3.66
4266 8500 3.225104 AGCATCATGGTTTCAACTGTGT 58.775 40.909 0.00 0.00 0.00 3.72
4267 8501 4.397420 AGCATCATGGTTTCAACTGTGTA 58.603 39.130 0.00 0.00 0.00 2.90
4268 8502 5.012239 AGCATCATGGTTTCAACTGTGTAT 58.988 37.500 0.00 0.00 0.00 2.29
4269 8503 5.097529 GCATCATGGTTTCAACTGTGTATG 58.902 41.667 0.00 0.00 0.00 2.39
4270 8504 5.335897 GCATCATGGTTTCAACTGTGTATGT 60.336 40.000 0.00 0.00 0.00 2.29
4271 8505 6.680810 CATCATGGTTTCAACTGTGTATGTT 58.319 36.000 0.00 0.00 0.00 2.71
4272 8506 6.070897 TCATGGTTTCAACTGTGTATGTTG 57.929 37.500 0.00 0.00 44.21 3.33
4273 8507 4.909696 TGGTTTCAACTGTGTATGTTGG 57.090 40.909 6.75 0.00 43.36 3.77
4274 8508 4.527944 TGGTTTCAACTGTGTATGTTGGA 58.472 39.130 6.75 0.00 43.36 3.53
4275 8509 4.578516 TGGTTTCAACTGTGTATGTTGGAG 59.421 41.667 6.75 0.00 43.36 3.86
4276 8510 4.537015 GTTTCAACTGTGTATGTTGGAGC 58.463 43.478 6.75 0.00 43.36 4.70
4277 8511 3.483808 TCAACTGTGTATGTTGGAGCA 57.516 42.857 6.75 0.00 43.36 4.26
4278 8512 3.402110 TCAACTGTGTATGTTGGAGCAG 58.598 45.455 6.75 0.00 43.36 4.24
4279 8513 3.070878 TCAACTGTGTATGTTGGAGCAGA 59.929 43.478 6.75 0.00 43.36 4.26
4280 8514 3.045601 ACTGTGTATGTTGGAGCAGAC 57.954 47.619 0.00 0.00 0.00 3.51
4281 8515 2.634940 ACTGTGTATGTTGGAGCAGACT 59.365 45.455 0.00 0.00 32.39 3.24
4282 8516 3.832490 ACTGTGTATGTTGGAGCAGACTA 59.168 43.478 0.00 0.00 32.39 2.59
4283 8517 4.177026 CTGTGTATGTTGGAGCAGACTAC 58.823 47.826 0.00 0.00 32.39 2.73
4284 8518 3.576550 TGTGTATGTTGGAGCAGACTACA 59.423 43.478 0.00 0.00 33.75 2.74
4285 8519 3.927142 GTGTATGTTGGAGCAGACTACAC 59.073 47.826 0.00 0.00 36.07 2.90
4286 8520 2.770164 ATGTTGGAGCAGACTACACC 57.230 50.000 0.00 0.00 36.07 4.16
4287 8521 1.419381 TGTTGGAGCAGACTACACCA 58.581 50.000 0.00 0.00 36.07 4.17
4288 8522 1.977854 TGTTGGAGCAGACTACACCAT 59.022 47.619 0.00 0.00 36.07 3.55
4289 8523 2.371841 TGTTGGAGCAGACTACACCATT 59.628 45.455 0.00 0.00 36.07 3.16
4290 8524 2.744202 GTTGGAGCAGACTACACCATTG 59.256 50.000 0.00 0.00 36.07 2.82
4291 8525 1.339055 TGGAGCAGACTACACCATTGC 60.339 52.381 0.00 0.00 29.04 3.56
4292 8526 1.339055 GGAGCAGACTACACCATTGCA 60.339 52.381 0.00 0.00 37.24 4.08
4293 8527 1.734465 GAGCAGACTACACCATTGCAC 59.266 52.381 0.00 0.00 37.24 4.57
4294 8528 1.072173 AGCAGACTACACCATTGCACA 59.928 47.619 0.00 0.00 37.24 4.57
4295 8529 2.086869 GCAGACTACACCATTGCACAT 58.913 47.619 0.00 0.00 34.99 3.21
4296 8530 3.055167 AGCAGACTACACCATTGCACATA 60.055 43.478 0.00 0.00 37.24 2.29
4297 8531 3.310774 GCAGACTACACCATTGCACATAG 59.689 47.826 0.00 0.00 34.99 2.23
4298 8532 4.758688 CAGACTACACCATTGCACATAGA 58.241 43.478 0.00 0.00 0.00 1.98
4299 8533 5.363101 CAGACTACACCATTGCACATAGAT 58.637 41.667 0.00 0.00 0.00 1.98
4300 8534 6.515832 CAGACTACACCATTGCACATAGATA 58.484 40.000 0.00 0.00 0.00 1.98
4301 8535 6.422100 CAGACTACACCATTGCACATAGATAC 59.578 42.308 0.00 0.00 0.00 2.24
4302 8536 6.325028 AGACTACACCATTGCACATAGATACT 59.675 38.462 0.00 0.00 0.00 2.12
4303 8537 6.889198 ACTACACCATTGCACATAGATACTT 58.111 36.000 0.00 0.00 0.00 2.24
4304 8538 6.986817 ACTACACCATTGCACATAGATACTTC 59.013 38.462 0.00 0.00 0.00 3.01
4305 8539 5.126067 ACACCATTGCACATAGATACTTCC 58.874 41.667 0.00 0.00 0.00 3.46
4306 8540 5.125356 CACCATTGCACATAGATACTTCCA 58.875 41.667 0.00 0.00 0.00 3.53
4307 8541 5.589855 CACCATTGCACATAGATACTTCCAA 59.410 40.000 0.00 0.00 0.00 3.53
4308 8542 6.263842 CACCATTGCACATAGATACTTCCAAT 59.736 38.462 0.00 0.00 0.00 3.16
4309 8543 7.445096 CACCATTGCACATAGATACTTCCAATA 59.555 37.037 0.00 0.00 0.00 1.90
4310 8544 8.166061 ACCATTGCACATAGATACTTCCAATAT 58.834 33.333 0.00 0.00 0.00 1.28
4311 8545 8.456471 CCATTGCACATAGATACTTCCAATATG 58.544 37.037 0.00 0.00 0.00 1.78
4312 8546 9.223099 CATTGCACATAGATACTTCCAATATGA 57.777 33.333 0.00 0.00 0.00 2.15
4313 8547 9.970553 ATTGCACATAGATACTTCCAATATGAT 57.029 29.630 0.00 0.00 0.00 2.45
4314 8548 8.782339 TGCACATAGATACTTCCAATATGATG 57.218 34.615 0.00 0.00 0.00 3.07
4315 8549 7.825761 TGCACATAGATACTTCCAATATGATGG 59.174 37.037 0.00 0.00 42.12 3.51
4316 8550 7.201679 GCACATAGATACTTCCAATATGATGGC 60.202 40.741 0.00 0.00 40.46 4.40
4317 8551 7.281774 CACATAGATACTTCCAATATGATGGCC 59.718 40.741 0.00 0.00 40.46 5.36
4318 8552 5.848286 AGATACTTCCAATATGATGGCCA 57.152 39.130 8.56 8.56 40.46 5.36
4319 8553 5.564550 AGATACTTCCAATATGATGGCCAC 58.435 41.667 8.16 2.36 40.46 5.01
4320 8554 3.959495 ACTTCCAATATGATGGCCACT 57.041 42.857 8.16 0.00 40.46 4.00
4321 8555 6.501805 AGATACTTCCAATATGATGGCCACTA 59.498 38.462 8.16 0.00 40.46 2.74
4322 8556 5.387113 ACTTCCAATATGATGGCCACTAA 57.613 39.130 8.16 0.00 40.46 2.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 3.430895 GCAACAAAGAAAGCACATCCATG 59.569 43.478 0.00 0.00 0.00 3.66
37 38 3.896648 TCTTAGCGGCAACAAAGAAAG 57.103 42.857 1.45 0.00 0.00 2.62
68 69 2.505819 GACCATGCTCTCCCTTCCTTAA 59.494 50.000 0.00 0.00 0.00 1.85
101 103 5.441718 TTCCTCCATATGCTTTCTGAAGT 57.558 39.130 0.00 0.00 35.25 3.01
119 121 3.758554 ACTAATGAGCGCAAACATTTCCT 59.241 39.130 24.04 9.73 37.75 3.36
120 122 4.096732 ACTAATGAGCGCAAACATTTCC 57.903 40.909 24.04 0.08 37.75 3.13
121 123 4.974591 AGACTAATGAGCGCAAACATTTC 58.025 39.130 24.04 18.42 37.75 2.17
122 124 4.697352 AGAGACTAATGAGCGCAAACATTT 59.303 37.500 24.04 12.96 37.75 2.32
123 125 4.093998 CAGAGACTAATGAGCGCAAACATT 59.906 41.667 23.03 23.03 39.53 2.71
124 126 3.620374 CAGAGACTAATGAGCGCAAACAT 59.380 43.478 11.47 9.61 0.00 2.71
125 127 2.995939 CAGAGACTAATGAGCGCAAACA 59.004 45.455 11.47 7.35 0.00 2.83
126 128 2.349886 CCAGAGACTAATGAGCGCAAAC 59.650 50.000 11.47 0.51 0.00 2.93
127 129 2.621338 CCAGAGACTAATGAGCGCAAA 58.379 47.619 11.47 0.00 0.00 3.68
128 130 1.134699 CCCAGAGACTAATGAGCGCAA 60.135 52.381 11.47 0.00 0.00 4.85
129 131 0.461548 CCCAGAGACTAATGAGCGCA 59.538 55.000 11.47 0.00 0.00 6.09
130 132 0.878086 GCCCAGAGACTAATGAGCGC 60.878 60.000 0.00 0.00 0.00 5.92
131 133 0.596083 CGCCCAGAGACTAATGAGCG 60.596 60.000 2.39 2.39 36.06 5.03
132 134 0.249657 CCGCCCAGAGACTAATGAGC 60.250 60.000 0.00 0.00 0.00 4.26
133 135 0.390860 CCCGCCCAGAGACTAATGAG 59.609 60.000 0.00 0.00 0.00 2.90
134 136 0.032515 TCCCGCCCAGAGACTAATGA 60.033 55.000 0.00 0.00 0.00 2.57
135 137 0.390860 CTCCCGCCCAGAGACTAATG 59.609 60.000 0.00 0.00 32.86 1.90
136 138 0.261991 TCTCCCGCCCAGAGACTAAT 59.738 55.000 0.00 0.00 35.46 1.73
137 139 0.261991 ATCTCCCGCCCAGAGACTAA 59.738 55.000 0.00 0.00 42.94 2.24
138 140 0.178987 GATCTCCCGCCCAGAGACTA 60.179 60.000 0.00 0.00 42.94 2.59
139 141 1.456705 GATCTCCCGCCCAGAGACT 60.457 63.158 0.00 0.00 42.94 3.24
140 142 1.045911 AAGATCTCCCGCCCAGAGAC 61.046 60.000 0.00 0.00 42.94 3.36
141 143 0.757188 GAAGATCTCCCGCCCAGAGA 60.757 60.000 0.00 0.00 44.20 3.10
142 144 0.758685 AGAAGATCTCCCGCCCAGAG 60.759 60.000 0.00 0.00 0.00 3.35
143 145 0.757188 GAGAAGATCTCCCGCCCAGA 60.757 60.000 0.00 0.00 37.55 3.86
144 146 1.045350 TGAGAAGATCTCCCGCCCAG 61.045 60.000 0.00 0.00 42.73 4.45
145 147 1.001631 TGAGAAGATCTCCCGCCCA 59.998 57.895 0.00 0.00 42.73 5.36
146 148 1.330655 TGTGAGAAGATCTCCCGCCC 61.331 60.000 0.00 0.00 42.73 6.13
151 153 3.870419 GACATTGCTGTGAGAAGATCTCC 59.130 47.826 0.00 0.00 42.73 3.71
158 160 4.223700 ACCAGATAGACATTGCTGTGAGAA 59.776 41.667 0.00 0.00 35.14 2.87
164 166 7.765307 ACATTTTAACCAGATAGACATTGCTG 58.235 34.615 0.00 0.00 0.00 4.41
251 287 7.837202 TTATCGTGGAACTACAACTTTATGG 57.163 36.000 0.00 0.00 31.75 2.74
292 328 5.835113 ACAACTACAACTTTTGACATGCT 57.165 34.783 0.00 0.00 0.00 3.79
307 343 6.812160 ACTCCTTTTGATGTCGATACAACTAC 59.188 38.462 0.00 0.00 39.58 2.73
308 344 6.931838 ACTCCTTTTGATGTCGATACAACTA 58.068 36.000 0.00 0.00 39.58 2.24
309 345 5.794894 ACTCCTTTTGATGTCGATACAACT 58.205 37.500 0.00 0.00 39.58 3.16
311 347 6.103997 GGTACTCCTTTTGATGTCGATACAA 58.896 40.000 0.00 0.00 39.58 2.41
312 348 5.186215 TGGTACTCCTTTTGATGTCGATACA 59.814 40.000 0.00 0.00 35.78 2.29
333 369 5.743636 AATCAAGTTGCCACAATATTGGT 57.256 34.783 19.37 2.87 39.09 3.67
364 400 7.386025 GGAAAAATCATCTTAAAAGTTGCAGCT 59.614 33.333 0.00 0.00 0.00 4.24
366 402 8.592105 TGGAAAAATCATCTTAAAAGTTGCAG 57.408 30.769 0.00 0.00 0.00 4.41
391 427 3.705051 TCCCGTAAGTGTCTGTTAGGAT 58.295 45.455 0.00 0.00 0.00 3.24
392 428 3.159213 TCCCGTAAGTGTCTGTTAGGA 57.841 47.619 0.00 0.00 0.00 2.94
400 436 2.558378 GGCCTAAATCCCGTAAGTGTC 58.442 52.381 0.00 0.00 0.00 3.67
410 446 3.095922 CCGAACAGGGCCTAAATCC 57.904 57.895 5.28 0.00 35.97 3.01
426 462 1.525995 AGAAGTGTGTGGGTTGCCG 60.526 57.895 0.00 0.00 0.00 5.69
437 473 0.976641 TCCGCAGATTCCAGAAGTGT 59.023 50.000 0.00 0.00 0.00 3.55
442 478 2.009424 CTCGCTCCGCAGATTCCAGA 62.009 60.000 0.00 0.00 0.00 3.86
459 495 1.135139 TCACGAAGCTGCAGTATCCTC 59.865 52.381 16.64 4.29 0.00 3.71
469 505 3.433274 TGCAGTAGAAAATCACGAAGCTG 59.567 43.478 0.00 0.00 0.00 4.24
474 510 3.994392 GGAACTGCAGTAGAAAATCACGA 59.006 43.478 22.01 0.00 0.00 4.35
551 587 2.262423 AGCAGGACCAGAGTTTCAAC 57.738 50.000 0.00 0.00 0.00 3.18
581 617 6.023435 CCAATTGTACGATTTGTCTGTCATG 58.977 40.000 5.54 0.00 0.00 3.07
587 623 5.006358 GCGTATCCAATTGTACGATTTGTCT 59.994 40.000 24.62 0.00 44.67 3.41
599 635 5.331902 ACTTTCAAATCGCGTATCCAATTG 58.668 37.500 5.77 0.00 0.00 2.32
636 672 7.597369 GTCCGCCCCAATATAAATGTTATTTTC 59.403 37.037 0.00 0.00 0.00 2.29
648 684 2.105134 ACGATTTGTCCGCCCCAATATA 59.895 45.455 0.00 0.00 0.00 0.86
649 685 1.133915 ACGATTTGTCCGCCCCAATAT 60.134 47.619 0.00 0.00 0.00 1.28
650 686 0.253610 ACGATTTGTCCGCCCCAATA 59.746 50.000 0.00 0.00 0.00 1.90
651 687 0.253610 TACGATTTGTCCGCCCCAAT 59.746 50.000 0.00 0.00 0.00 3.16
652 688 0.253610 ATACGATTTGTCCGCCCCAA 59.746 50.000 0.00 0.00 0.00 4.12
653 689 0.462937 CATACGATTTGTCCGCCCCA 60.463 55.000 0.00 0.00 0.00 4.96
654 690 0.463116 ACATACGATTTGTCCGCCCC 60.463 55.000 0.00 0.00 0.00 5.80
655 691 0.935196 GACATACGATTTGTCCGCCC 59.065 55.000 0.00 0.00 38.00 6.13
656 692 1.326548 GTGACATACGATTTGTCCGCC 59.673 52.381 12.25 1.26 42.25 6.13
657 693 1.996898 TGTGACATACGATTTGTCCGC 59.003 47.619 12.25 7.68 42.25 5.54
658 694 4.112634 AGATGTGACATACGATTTGTCCG 58.887 43.478 0.00 0.00 42.25 4.79
659 695 7.715265 ATTAGATGTGACATACGATTTGTCC 57.285 36.000 0.00 6.66 42.25 4.02
662 698 9.586150 GCTTAATTAGATGTGACATACGATTTG 57.414 33.333 0.00 0.00 0.00 2.32
663 699 9.325198 TGCTTAATTAGATGTGACATACGATTT 57.675 29.630 0.00 0.00 0.00 2.17
664 700 8.887036 TGCTTAATTAGATGTGACATACGATT 57.113 30.769 0.00 1.90 0.00 3.34
665 701 8.929746 CATGCTTAATTAGATGTGACATACGAT 58.070 33.333 0.00 0.00 0.00 3.73
666 702 8.141268 TCATGCTTAATTAGATGTGACATACGA 58.859 33.333 0.00 0.00 0.00 3.43
667 703 8.217115 GTCATGCTTAATTAGATGTGACATACG 58.783 37.037 0.00 0.00 34.21 3.06
668 704 9.045223 TGTCATGCTTAATTAGATGTGACATAC 57.955 33.333 15.70 0.00 36.74 2.39
669 705 9.783081 ATGTCATGCTTAATTAGATGTGACATA 57.217 29.630 22.96 9.33 42.86 2.29
670 706 8.687292 ATGTCATGCTTAATTAGATGTGACAT 57.313 30.769 20.83 20.83 41.56 3.06
671 707 7.769970 TGATGTCATGCTTAATTAGATGTGACA 59.230 33.333 19.16 19.16 41.19 3.58
672 708 8.066595 GTGATGTCATGCTTAATTAGATGTGAC 58.933 37.037 12.45 12.45 34.43 3.67
673 709 7.769970 TGTGATGTCATGCTTAATTAGATGTGA 59.230 33.333 0.00 0.00 0.00 3.58
674 710 7.854422 GTGTGATGTCATGCTTAATTAGATGTG 59.146 37.037 0.00 0.00 0.00 3.21
675 711 7.553760 TGTGTGATGTCATGCTTAATTAGATGT 59.446 33.333 0.00 0.00 0.00 3.06
676 712 7.922837 TGTGTGATGTCATGCTTAATTAGATG 58.077 34.615 0.00 0.00 0.00 2.90
677 713 8.400947 GTTGTGTGATGTCATGCTTAATTAGAT 58.599 33.333 0.00 0.00 0.00 1.98
678 714 7.390162 TGTTGTGTGATGTCATGCTTAATTAGA 59.610 33.333 0.00 0.00 0.00 2.10
679 715 7.529158 TGTTGTGTGATGTCATGCTTAATTAG 58.471 34.615 0.00 0.00 0.00 1.73
680 716 7.446001 TGTTGTGTGATGTCATGCTTAATTA 57.554 32.000 0.00 0.00 0.00 1.40
681 717 6.330004 TGTTGTGTGATGTCATGCTTAATT 57.670 33.333 0.00 0.00 0.00 1.40
682 718 5.963176 TGTTGTGTGATGTCATGCTTAAT 57.037 34.783 0.00 0.00 0.00 1.40
683 719 5.472820 TGATGTTGTGTGATGTCATGCTTAA 59.527 36.000 0.00 0.00 0.00 1.85
684 720 5.002516 TGATGTTGTGTGATGTCATGCTTA 58.997 37.500 0.00 0.00 0.00 3.09
685 721 3.822167 TGATGTTGTGTGATGTCATGCTT 59.178 39.130 0.00 0.00 0.00 3.91
686 722 3.414269 TGATGTTGTGTGATGTCATGCT 58.586 40.909 0.00 0.00 0.00 3.79
687 723 3.189910 ACTGATGTTGTGTGATGTCATGC 59.810 43.478 0.00 0.00 0.00 4.06
688 724 6.484818 TTACTGATGTTGTGTGATGTCATG 57.515 37.500 0.00 0.00 0.00 3.07
689 725 7.509141 TTTTACTGATGTTGTGTGATGTCAT 57.491 32.000 0.00 0.00 0.00 3.06
690 726 6.934048 TTTTACTGATGTTGTGTGATGTCA 57.066 33.333 0.00 0.00 0.00 3.58
727 763 9.772973 GGGGTTTCAAGATTTATAAAAAGTGTT 57.227 29.630 1.21 0.00 0.00 3.32
728 764 9.154632 AGGGGTTTCAAGATTTATAAAAAGTGT 57.845 29.630 1.21 0.00 0.00 3.55
729 765 9.996554 AAGGGGTTTCAAGATTTATAAAAAGTG 57.003 29.630 1.21 1.11 0.00 3.16
738 774 9.983024 TCACATAATAAGGGGTTTCAAGATTTA 57.017 29.630 0.00 0.00 0.00 1.40
739 775 8.893563 TCACATAATAAGGGGTTTCAAGATTT 57.106 30.769 0.00 0.00 0.00 2.17
740 776 8.917088 CATCACATAATAAGGGGTTTCAAGATT 58.083 33.333 0.00 0.00 0.00 2.40
741 777 8.281531 TCATCACATAATAAGGGGTTTCAAGAT 58.718 33.333 0.00 0.00 0.00 2.40
742 778 7.638444 TCATCACATAATAAGGGGTTTCAAGA 58.362 34.615 0.00 0.00 0.00 3.02
743 779 7.880160 TCATCACATAATAAGGGGTTTCAAG 57.120 36.000 0.00 0.00 0.00 3.02
744 780 7.893302 AGTTCATCACATAATAAGGGGTTTCAA 59.107 33.333 0.00 0.00 0.00 2.69
745 781 7.410174 AGTTCATCACATAATAAGGGGTTTCA 58.590 34.615 0.00 0.00 0.00 2.69
746 782 7.881775 AGTTCATCACATAATAAGGGGTTTC 57.118 36.000 0.00 0.00 0.00 2.78
747 783 8.557450 AGTAGTTCATCACATAATAAGGGGTTT 58.443 33.333 0.00 0.00 0.00 3.27
748 784 8.102484 AGTAGTTCATCACATAATAAGGGGTT 57.898 34.615 0.00 0.00 0.00 4.11
749 785 7.691993 AGTAGTTCATCACATAATAAGGGGT 57.308 36.000 0.00 0.00 0.00 4.95
750 786 9.712305 CTAAGTAGTTCATCACATAATAAGGGG 57.288 37.037 0.00 0.00 0.00 4.79
757 793 9.803315 GTCACATCTAAGTAGTTCATCACATAA 57.197 33.333 0.00 0.00 0.00 1.90
758 794 8.966868 TGTCACATCTAAGTAGTTCATCACATA 58.033 33.333 0.00 0.00 0.00 2.29
759 795 7.840931 TGTCACATCTAAGTAGTTCATCACAT 58.159 34.615 0.00 0.00 0.00 3.21
760 796 7.227049 TGTCACATCTAAGTAGTTCATCACA 57.773 36.000 0.00 0.00 0.00 3.58
761 797 8.194104 AGATGTCACATCTAAGTAGTTCATCAC 58.806 37.037 19.29 0.00 31.95 3.06
762 798 8.298729 AGATGTCACATCTAAGTAGTTCATCA 57.701 34.615 19.29 0.00 31.95 3.07
796 832 9.761504 CAGAATGACTAATTCACATCTAGATGT 57.238 33.333 28.95 28.95 46.65 3.06
797 833 8.710551 GCAGAATGACTAATTCACATCTAGATG 58.289 37.037 27.63 27.63 46.21 2.90
798 834 8.427276 TGCAGAATGACTAATTCACATCTAGAT 58.573 33.333 0.00 0.00 46.21 1.98
799 835 7.785033 TGCAGAATGACTAATTCACATCTAGA 58.215 34.615 0.00 0.00 46.21 2.43
800 836 8.604640 ATGCAGAATGACTAATTCACATCTAG 57.395 34.615 0.00 0.00 46.21 2.43
801 837 8.969260 AATGCAGAATGACTAATTCACATCTA 57.031 30.769 0.00 0.00 46.21 1.98
802 838 7.876936 AATGCAGAATGACTAATTCACATCT 57.123 32.000 0.00 0.00 46.21 2.90
810 846 9.903682 GCACAATATAAATGCAGAATGACTAAT 57.096 29.630 0.00 0.00 39.69 1.73
811 847 8.069574 CGCACAATATAAATGCAGAATGACTAA 58.930 33.333 0.00 0.00 39.69 2.24
812 848 7.440856 TCGCACAATATAAATGCAGAATGACTA 59.559 33.333 0.00 0.00 39.69 2.59
813 849 6.260714 TCGCACAATATAAATGCAGAATGACT 59.739 34.615 0.00 0.00 39.69 3.41
814 850 6.429624 TCGCACAATATAAATGCAGAATGAC 58.570 36.000 0.00 0.00 39.69 3.06
815 851 6.616774 TCGCACAATATAAATGCAGAATGA 57.383 33.333 0.00 0.00 39.69 2.57
816 852 7.682593 TTTCGCACAATATAAATGCAGAATG 57.317 32.000 0.00 0.00 39.39 2.67
817 853 7.043192 GCTTTTCGCACAATATAAATGCAGAAT 60.043 33.333 0.00 0.00 39.39 2.40
818 854 6.253298 GCTTTTCGCACAATATAAATGCAGAA 59.747 34.615 0.00 7.36 39.39 3.02
819 855 5.743398 GCTTTTCGCACAATATAAATGCAGA 59.257 36.000 0.00 2.96 39.39 4.26
820 856 5.515982 TGCTTTTCGCACAATATAAATGCAG 59.484 36.000 0.00 0.00 45.47 4.41
821 857 5.405797 TGCTTTTCGCACAATATAAATGCA 58.594 33.333 0.00 0.00 45.47 3.96
822 858 5.947503 TGCTTTTCGCACAATATAAATGC 57.052 34.783 0.00 0.00 45.47 3.56
868 905 4.776322 CGATGCTTGGGGCGGACA 62.776 66.667 0.00 0.00 45.43 4.02
869 906 3.757248 ATCGATGCTTGGGGCGGAC 62.757 63.158 0.00 0.00 45.43 4.79
879 916 0.543174 GGTAGAGGGGGATCGATGCT 60.543 60.000 16.91 0.00 0.00 3.79
895 932 4.137872 CGCCGGCGAAAGGAGGTA 62.138 66.667 44.86 0.00 42.83 3.08
1132 1201 4.516195 GAACGAGAGCGGGAGGGC 62.516 72.222 0.00 0.00 43.17 5.19
1133 1202 3.839432 GGAACGAGAGCGGGAGGG 61.839 72.222 0.00 0.00 43.17 4.30
1134 1203 3.068691 TGGAACGAGAGCGGGAGG 61.069 66.667 0.00 0.00 43.17 4.30
1135 1204 1.878656 AACTGGAACGAGAGCGGGAG 61.879 60.000 0.00 0.00 43.17 4.30
1142 1211 2.288030 GGAACGAGAAACTGGAACGAGA 60.288 50.000 0.00 0.00 0.00 4.04
1159 1257 0.037605 ACACGAGAATCCCACGGAAC 60.038 55.000 0.00 0.00 34.34 3.62
1203 1331 2.183409 CCACAACCAGGCATACAGC 58.817 57.895 0.00 0.00 44.65 4.40
1211 1339 1.601759 CCAGAGTGCCACAACCAGG 60.602 63.158 0.00 0.00 0.00 4.45
1496 1631 3.381045 CGATAAGCTCGCCATTTCTGTA 58.619 45.455 0.00 0.00 41.14 2.74
1501 1636 0.468226 TCCCGATAAGCTCGCCATTT 59.532 50.000 0.00 0.00 46.25 2.32
1504 1639 2.812499 GTCCCGATAAGCTCGCCA 59.188 61.111 0.00 0.00 46.25 5.69
1534 1669 2.436173 TGTACAATGTGGACTGTGGTGA 59.564 45.455 0.00 0.00 30.83 4.02
1548 1683 7.737972 TGCTAAAACAGTGTACATGTACAAT 57.262 32.000 34.24 31.24 46.33 2.71
1554 1689 6.902341 AGTTCATGCTAAAACAGTGTACATG 58.098 36.000 0.00 6.52 35.81 3.21
1578 1721 7.859325 GGTGGATCTTTATGCAACTTACTAA 57.141 36.000 0.00 0.00 38.09 2.24
1602 1761 3.613432 GCAGCACCAGGAAAAATTCAGAG 60.613 47.826 0.00 0.00 0.00 3.35
1621 1780 1.795768 TACGTTTTCAGGCTCTGCAG 58.204 50.000 7.63 7.63 0.00 4.41
1630 1798 5.292101 GGTCATCTCCAAGATACGTTTTCAG 59.708 44.000 0.00 0.00 32.12 3.02
1673 1841 0.326595 TGCAACCCCACACGACATAT 59.673 50.000 0.00 0.00 0.00 1.78
1674 1842 0.321210 CTGCAACCCCACACGACATA 60.321 55.000 0.00 0.00 0.00 2.29
1675 1843 1.600636 CTGCAACCCCACACGACAT 60.601 57.895 0.00 0.00 0.00 3.06
1676 1844 2.050836 ATCTGCAACCCCACACGACA 62.051 55.000 0.00 0.00 0.00 4.35
1686 1854 2.417719 AGTCGAAACTCATCTGCAACC 58.582 47.619 0.00 0.00 0.00 3.77
1690 1858 1.656095 CGGAAGTCGAAACTCATCTGC 59.344 52.381 0.00 0.00 42.43 4.26
1691 1859 3.217599 TCGGAAGTCGAAACTCATCTG 57.782 47.619 0.00 0.00 45.86 2.90
1701 1869 0.970937 ATCAAGGCCTCGGAAGTCGA 60.971 55.000 5.23 0.00 46.77 4.20
1705 1888 1.757118 TCACTATCAAGGCCTCGGAAG 59.243 52.381 5.23 9.81 0.00 3.46
1708 1891 1.270518 CCATCACTATCAAGGCCTCGG 60.271 57.143 5.23 0.77 0.00 4.63
1796 2016 4.965119 ATTCGGTGCTGACCTTTTAATC 57.035 40.909 0.00 0.00 40.58 1.75
1811 2031 5.989168 GGGAAATTTTTGAACAGAATTCGGT 59.011 36.000 5.32 5.32 0.00 4.69
1813 2033 5.388371 GCGGGAAATTTTTGAACAGAATTCG 60.388 40.000 0.00 0.00 0.00 3.34
1818 2038 2.287909 CGGCGGGAAATTTTTGAACAGA 60.288 45.455 0.00 0.00 0.00 3.41
1826 2046 2.261361 GCAGCGGCGGGAAATTTT 59.739 55.556 9.78 0.00 0.00 1.82
1836 2056 0.175989 AGTAAAGAGGTAGCAGCGGC 59.824 55.000 0.00 0.00 41.61 6.53
1860 2080 1.426215 ACCCCTGGGAAACGTTAACAT 59.574 47.619 16.20 0.00 38.96 2.71
1861 2086 0.845337 ACCCCTGGGAAACGTTAACA 59.155 50.000 16.20 0.00 38.96 2.41
1946 2172 3.686726 ACTTCTCAAAATCATCACGCTCC 59.313 43.478 0.00 0.00 0.00 4.70
2001 2227 9.907229 CCCCTTTCTGATTAGAAGTAAATTACT 57.093 33.333 0.00 0.00 43.41 2.24
2002 2228 9.901172 TCCCCTTTCTGATTAGAAGTAAATTAC 57.099 33.333 0.00 0.00 43.41 1.89
2004 2230 9.822727 TTTCCCCTTTCTGATTAGAAGTAAATT 57.177 29.630 0.00 0.00 43.41 1.82
2010 2236 5.821097 ACCTTTCCCCTTTCTGATTAGAAG 58.179 41.667 0.00 0.00 43.41 2.85
2034 2260 5.304686 TCAGTTCCTGTTCTTGTAATGGT 57.695 39.130 0.00 0.00 32.61 3.55
2035 2261 5.048713 GGTTCAGTTCCTGTTCTTGTAATGG 60.049 44.000 0.00 0.00 32.61 3.16
2041 2269 5.997746 TGAATAGGTTCAGTTCCTGTTCTTG 59.002 40.000 17.45 0.00 46.28 3.02
2094 2323 4.386049 GTCACGAAGTACTGAGACCATTTG 59.614 45.833 0.00 0.00 41.61 2.32
2108 2337 4.922134 AAGTGGCTAAACTTGTCACGAAGT 60.922 41.667 0.00 0.00 39.55 3.01
2124 2353 2.664402 AATGTGAGGTTCAAGTGGCT 57.336 45.000 0.00 0.00 0.00 4.75
2179 2408 4.442706 AGCGGATATGTCTTGGTTTACAG 58.557 43.478 0.00 0.00 0.00 2.74
2187 2419 9.254133 CTGGATATTTATAGCGGATATGTCTTG 57.746 37.037 0.00 0.00 0.00 3.02
2190 2422 9.601217 AAACTGGATATTTATAGCGGATATGTC 57.399 33.333 0.00 0.00 0.00 3.06
2203 2436 9.914834 ACTGCTAAATACCAAACTGGATATTTA 57.085 29.630 0.00 9.06 40.96 1.40
2228 2461 5.220931 GGAATACCTGAATTCAGTGATGCAC 60.221 44.000 29.03 16.79 42.27 4.57
2383 2618 7.338800 ACTTCACTTCACAAAAGACAATGAT 57.661 32.000 0.00 0.00 0.00 2.45
2495 6076 5.119898 CAGACAAAATGCTACAGAGACAGAC 59.880 44.000 0.00 0.00 0.00 3.51
2675 6276 3.526899 TCCAGGGATGTCCTCAACTTAA 58.473 45.455 0.00 0.00 46.12 1.85
2678 6283 1.842562 CATCCAGGGATGTCCTCAACT 59.157 52.381 18.22 0.00 46.12 3.16
2817 6898 9.431887 TCAGTTAGCAACTAATAATTTCGTTCT 57.568 29.630 1.95 0.00 40.46 3.01
2870 6996 4.999950 GGATGTTAATGATACTGCCCTCTG 59.000 45.833 0.00 0.00 0.00 3.35
2871 6997 4.660303 TGGATGTTAATGATACTGCCCTCT 59.340 41.667 0.00 0.00 0.00 3.69
2947 7074 5.105595 TCCGATGATTAGCTATGATGGTGAG 60.106 44.000 0.00 0.00 0.00 3.51
3007 7135 6.041979 AGCTGTGATGGTGAAAAGGTATTTTT 59.958 34.615 0.00 0.00 41.59 1.94
3011 7139 4.012374 CAGCTGTGATGGTGAAAAGGTAT 58.988 43.478 5.25 0.00 37.61 2.73
3028 7156 3.006323 ACACTCTTCAAGGACTACAGCTG 59.994 47.826 13.48 13.48 0.00 4.24
3040 7168 2.609747 AGCCTGAGGTACACTCTTCAA 58.390 47.619 0.00 0.00 46.72 2.69
3050 7178 4.079385 TCAGTACTCCATAAGCCTGAGGTA 60.079 45.833 0.00 0.00 33.59 3.08
3061 7189 6.250711 TGGTTACTCAGTTCAGTACTCCATA 58.749 40.000 0.00 0.00 33.85 2.74
3121 7251 5.323371 TGCAACTAAATAACAATGGGAGC 57.677 39.130 0.00 0.00 0.00 4.70
3132 7262 9.988815 ACCACATAATTGTTTTGCAACTAAATA 57.011 25.926 0.00 0.00 40.28 1.40
3170 7383 3.809279 GGCAACAGCTTTAAAATTGCAGT 59.191 39.130 19.47 8.53 45.89 4.40
3171 7384 4.060205 AGGCAACAGCTTTAAAATTGCAG 58.940 39.130 19.47 8.04 45.89 4.41
3172 7385 3.808726 CAGGCAACAGCTTTAAAATTGCA 59.191 39.130 19.47 0.00 45.89 4.08
3195 7408 6.204688 TGTTGAACTCAGCGAATAAACTGAAT 59.795 34.615 0.00 0.00 42.12 2.57
3220 7434 4.142093 GCATCAAAGCCAGATAAACCATGT 60.142 41.667 0.00 0.00 0.00 3.21
3332 7550 6.721208 AACAGATGAATGTAAATGGGACAAGT 59.279 34.615 0.00 0.00 35.28 3.16
3333 7551 7.161773 AACAGATGAATGTAAATGGGACAAG 57.838 36.000 0.00 0.00 35.28 3.16
3343 7561 9.942850 TCTCTGAATGTAAACAGATGAATGTAA 57.057 29.630 0.00 0.00 41.35 2.41
3432 7656 5.768164 ACACAATCTCAAGGAACGGTAAAAT 59.232 36.000 0.00 0.00 0.00 1.82
3434 7658 4.513692 CACACAATCTCAAGGAACGGTAAA 59.486 41.667 0.00 0.00 0.00 2.01
3437 7661 2.158813 ACACACAATCTCAAGGAACGGT 60.159 45.455 0.00 0.00 0.00 4.83
3476 7700 6.173339 ACGAAAGACCATGTGTATCAAGAAT 58.827 36.000 0.00 0.00 0.00 2.40
3495 7719 6.655425 TGTCAAATGTATGTCCCATAACGAAA 59.345 34.615 0.00 0.00 0.00 3.46
3498 7722 6.618287 ATGTCAAATGTATGTCCCATAACG 57.382 37.500 0.00 0.00 0.00 3.18
3499 7723 8.902540 TCTATGTCAAATGTATGTCCCATAAC 57.097 34.615 0.00 0.00 0.00 1.89
3500 7724 7.661437 GCTCTATGTCAAATGTATGTCCCATAA 59.339 37.037 0.00 0.00 0.00 1.90
3502 7726 6.000219 GCTCTATGTCAAATGTATGTCCCAT 59.000 40.000 0.00 0.00 0.00 4.00
3503 7727 5.130975 AGCTCTATGTCAAATGTATGTCCCA 59.869 40.000 0.00 0.00 0.00 4.37
3504 7728 5.615289 AGCTCTATGTCAAATGTATGTCCC 58.385 41.667 0.00 0.00 0.00 4.46
3507 7731 7.112122 TGGAAAGCTCTATGTCAAATGTATGT 58.888 34.615 0.00 0.00 0.00 2.29
3508 7732 7.558161 TGGAAAGCTCTATGTCAAATGTATG 57.442 36.000 0.00 0.00 0.00 2.39
3570 7796 5.509498 ACATGCATAGAAGTATTGGTTGGT 58.491 37.500 0.00 0.00 0.00 3.67
3601 7827 6.837312 TGAGAAGTGAAAATAGGAAGTGGAA 58.163 36.000 0.00 0.00 0.00 3.53
3639 7865 4.706962 GGAATTGGAGCTACAAAATGACCT 59.293 41.667 17.06 0.00 33.48 3.85
3641 7867 5.643379 TGGAATTGGAGCTACAAAATGAC 57.357 39.130 17.06 5.43 33.48 3.06
3645 7871 6.662865 TTGATTGGAATTGGAGCTACAAAA 57.337 33.333 17.06 5.65 33.48 2.44
3673 7899 2.227149 TCTTCTCATGCATGTGTTGTGC 59.773 45.455 25.43 0.00 42.81 4.57
3692 7918 4.630644 AATCCATGTCATTAGCCGATCT 57.369 40.909 0.00 0.00 0.00 2.75
3728 7954 9.768662 AAATTAATCCTTGCAATTATCCACATC 57.231 29.630 0.00 0.00 0.00 3.06
3767 7993 6.542005 CACCTCACAAAGTTATGGCATACATA 59.458 38.462 6.72 0.00 41.03 2.29
3810 8036 8.546083 AGTTGATCTCCACTACATCTAATTCT 57.454 34.615 0.00 0.00 0.00 2.40
3903 8133 3.454858 TGATTTCCTGGAACCTAGCTCT 58.545 45.455 9.04 0.00 0.00 4.09
3972 8206 7.717875 TCAGTTTACCTTAAGCATGTGTAACTT 59.282 33.333 0.00 0.00 38.04 2.66
4011 8245 8.866956 GTTCCAAAATTGCTTCATCTAAATCAG 58.133 33.333 0.00 0.00 0.00 2.90
4012 8246 8.366401 TGTTCCAAAATTGCTTCATCTAAATCA 58.634 29.630 0.00 0.00 0.00 2.57
4039 8273 8.695456 GGTCACCTGATGGTCATTTTATTTTAT 58.305 33.333 0.00 0.00 46.60 1.40
4045 8279 4.927267 AGGTCACCTGATGGTCATTTTA 57.073 40.909 0.00 0.00 46.60 1.52
4059 8293 3.055385 TGAACCAGCATAGTAAGGTCACC 60.055 47.826 0.00 0.00 32.05 4.02
4107 8341 1.352017 TCTGTGGCACCTGTGATTCAT 59.648 47.619 16.26 0.00 0.00 2.57
4140 8374 8.616076 CATTAGGCTTATGTTTGTTCTAAGAGG 58.384 37.037 5.35 0.00 0.00 3.69
4158 8392 8.049117 TGTGTGAGAAATTAGAATCATTAGGCT 58.951 33.333 0.00 0.00 0.00 4.58
4160 8394 9.388506 AGTGTGTGAGAAATTAGAATCATTAGG 57.611 33.333 0.00 0.00 0.00 2.69
4164 8398 8.251026 TCGTAGTGTGTGAGAAATTAGAATCAT 58.749 33.333 0.00 0.00 0.00 2.45
4176 8410 0.596577 GCTGGTCGTAGTGTGTGAGA 59.403 55.000 0.00 0.00 0.00 3.27
4177 8411 0.313987 TGCTGGTCGTAGTGTGTGAG 59.686 55.000 0.00 0.00 0.00 3.51
4178 8412 0.031585 GTGCTGGTCGTAGTGTGTGA 59.968 55.000 0.00 0.00 0.00 3.58
4179 8413 0.249280 TGTGCTGGTCGTAGTGTGTG 60.249 55.000 0.00 0.00 0.00 3.82
4180 8414 0.462375 TTGTGCTGGTCGTAGTGTGT 59.538 50.000 0.00 0.00 0.00 3.72
4181 8415 0.859232 GTTGTGCTGGTCGTAGTGTG 59.141 55.000 0.00 0.00 0.00 3.82
4182 8416 0.249741 GGTTGTGCTGGTCGTAGTGT 60.250 55.000 0.00 0.00 0.00 3.55
4183 8417 0.249699 TGGTTGTGCTGGTCGTAGTG 60.250 55.000 0.00 0.00 0.00 2.74
4184 8418 0.033504 CTGGTTGTGCTGGTCGTAGT 59.966 55.000 0.00 0.00 0.00 2.73
4185 8419 0.317160 TCTGGTTGTGCTGGTCGTAG 59.683 55.000 0.00 0.00 0.00 3.51
4186 8420 0.973632 ATCTGGTTGTGCTGGTCGTA 59.026 50.000 0.00 0.00 0.00 3.43
4187 8421 0.108585 AATCTGGTTGTGCTGGTCGT 59.891 50.000 0.00 0.00 0.00 4.34
4188 8422 0.798776 GAATCTGGTTGTGCTGGTCG 59.201 55.000 0.00 0.00 0.00 4.79
4189 8423 1.808945 CTGAATCTGGTTGTGCTGGTC 59.191 52.381 0.00 0.00 0.00 4.02
4190 8424 1.901591 CTGAATCTGGTTGTGCTGGT 58.098 50.000 0.00 0.00 0.00 4.00
4191 8425 0.524862 GCTGAATCTGGTTGTGCTGG 59.475 55.000 0.00 0.00 0.00 4.85
4192 8426 1.068748 GTGCTGAATCTGGTTGTGCTG 60.069 52.381 0.00 0.00 0.00 4.41
4193 8427 1.242076 GTGCTGAATCTGGTTGTGCT 58.758 50.000 0.00 0.00 0.00 4.40
4194 8428 0.110056 CGTGCTGAATCTGGTTGTGC 60.110 55.000 0.00 0.00 0.00 4.57
4195 8429 0.110056 GCGTGCTGAATCTGGTTGTG 60.110 55.000 0.00 0.00 0.00 3.33
4196 8430 1.237285 GGCGTGCTGAATCTGGTTGT 61.237 55.000 0.00 0.00 0.00 3.32
4197 8431 1.503542 GGCGTGCTGAATCTGGTTG 59.496 57.895 0.00 0.00 0.00 3.77
4198 8432 1.675641 GGGCGTGCTGAATCTGGTT 60.676 57.895 0.00 0.00 0.00 3.67
4199 8433 2.045926 GGGCGTGCTGAATCTGGT 60.046 61.111 0.00 0.00 0.00 4.00
4200 8434 2.110967 CAGGGCGTGCTGAATCTGG 61.111 63.158 0.00 0.00 0.00 3.86
4201 8435 0.674581 TTCAGGGCGTGCTGAATCTG 60.675 55.000 1.51 0.00 35.02 2.90
4202 8436 0.674895 GTTCAGGGCGTGCTGAATCT 60.675 55.000 7.74 0.00 40.96 2.40
4203 8437 0.674895 AGTTCAGGGCGTGCTGAATC 60.675 55.000 7.74 3.42 40.96 2.52
4204 8438 0.250901 AAGTTCAGGGCGTGCTGAAT 60.251 50.000 7.74 0.00 40.96 2.57
4205 8439 0.465460 AAAGTTCAGGGCGTGCTGAA 60.465 50.000 1.51 1.34 37.26 3.02
4206 8440 1.148273 AAAGTTCAGGGCGTGCTGA 59.852 52.632 1.51 0.00 0.00 4.26
4207 8441 1.283793 CAAAGTTCAGGGCGTGCTG 59.716 57.895 1.51 0.00 0.00 4.41
4208 8442 0.107831 TACAAAGTTCAGGGCGTGCT 59.892 50.000 1.51 0.00 0.00 4.40
4209 8443 0.517316 CTACAAAGTTCAGGGCGTGC 59.483 55.000 1.51 0.00 0.00 5.34
4210 8444 1.878953 ACTACAAAGTTCAGGGCGTG 58.121 50.000 0.00 0.00 29.00 5.34
4211 8445 2.632987 AACTACAAAGTTCAGGGCGT 57.367 45.000 0.00 0.00 42.42 5.68
4220 8454 6.496144 AGTGGAAACCTAGAACTACAAAGT 57.504 37.500 0.00 0.00 37.65 2.66
4221 8455 7.117956 GCTAAGTGGAAACCTAGAACTACAAAG 59.882 40.741 0.00 0.00 0.00 2.77
4222 8456 6.932960 GCTAAGTGGAAACCTAGAACTACAAA 59.067 38.462 0.00 0.00 0.00 2.83
4223 8457 6.042322 TGCTAAGTGGAAACCTAGAACTACAA 59.958 38.462 0.00 0.00 0.00 2.41
4224 8458 5.541101 TGCTAAGTGGAAACCTAGAACTACA 59.459 40.000 0.00 0.00 0.00 2.74
4225 8459 6.034161 TGCTAAGTGGAAACCTAGAACTAC 57.966 41.667 0.00 0.00 0.00 2.73
4226 8460 6.439375 TGATGCTAAGTGGAAACCTAGAACTA 59.561 38.462 0.00 0.00 0.00 2.24
4227 8461 5.248477 TGATGCTAAGTGGAAACCTAGAACT 59.752 40.000 0.00 0.00 0.00 3.01
4228 8462 5.488341 TGATGCTAAGTGGAAACCTAGAAC 58.512 41.667 0.00 0.00 0.00 3.01
4229 8463 5.755409 TGATGCTAAGTGGAAACCTAGAA 57.245 39.130 0.00 0.00 0.00 2.10
4230 8464 5.396772 CCATGATGCTAAGTGGAAACCTAGA 60.397 44.000 0.00 0.00 33.53 2.43
4231 8465 4.818546 CCATGATGCTAAGTGGAAACCTAG 59.181 45.833 0.00 0.00 33.53 3.02
4232 8466 4.227300 ACCATGATGCTAAGTGGAAACCTA 59.773 41.667 0.00 0.00 35.69 3.08
4233 8467 3.010584 ACCATGATGCTAAGTGGAAACCT 59.989 43.478 0.00 0.00 35.69 3.50
4234 8468 3.356290 ACCATGATGCTAAGTGGAAACC 58.644 45.455 0.00 0.00 35.69 3.27
4235 8469 5.048083 TGAAACCATGATGCTAAGTGGAAAC 60.048 40.000 0.00 0.00 35.69 2.78
4236 8470 5.076182 TGAAACCATGATGCTAAGTGGAAA 58.924 37.500 0.00 0.00 35.69 3.13
4237 8471 4.661222 TGAAACCATGATGCTAAGTGGAA 58.339 39.130 0.00 0.00 35.69 3.53
4238 8472 4.299586 TGAAACCATGATGCTAAGTGGA 57.700 40.909 0.00 0.00 35.69 4.02
4239 8473 4.460382 AGTTGAAACCATGATGCTAAGTGG 59.540 41.667 0.00 0.00 37.74 4.00
4240 8474 5.048504 ACAGTTGAAACCATGATGCTAAGTG 60.049 40.000 0.00 0.15 0.00 3.16
4241 8475 5.048504 CACAGTTGAAACCATGATGCTAAGT 60.049 40.000 0.00 0.00 0.00 2.24
4242 8476 5.048504 ACACAGTTGAAACCATGATGCTAAG 60.049 40.000 0.00 0.00 0.00 2.18
4243 8477 4.826733 ACACAGTTGAAACCATGATGCTAA 59.173 37.500 0.00 0.00 0.00 3.09
4244 8478 4.397420 ACACAGTTGAAACCATGATGCTA 58.603 39.130 0.00 0.00 0.00 3.49
4245 8479 3.225104 ACACAGTTGAAACCATGATGCT 58.775 40.909 0.00 0.00 0.00 3.79
4246 8480 3.648339 ACACAGTTGAAACCATGATGC 57.352 42.857 0.00 0.00 0.00 3.91
4247 8481 6.258230 ACATACACAGTTGAAACCATGATG 57.742 37.500 0.00 0.00 0.00 3.07
4248 8482 6.899393 AACATACACAGTTGAAACCATGAT 57.101 33.333 0.00 0.00 0.00 2.45
4258 8492 3.187227 GTCTGCTCCAACATACACAGTTG 59.813 47.826 0.00 0.00 44.47 3.16
4259 8493 3.071602 AGTCTGCTCCAACATACACAGTT 59.928 43.478 0.00 0.00 0.00 3.16
4260 8494 2.634940 AGTCTGCTCCAACATACACAGT 59.365 45.455 0.00 0.00 0.00 3.55
4261 8495 3.325293 AGTCTGCTCCAACATACACAG 57.675 47.619 0.00 0.00 0.00 3.66
4262 8496 3.576550 TGTAGTCTGCTCCAACATACACA 59.423 43.478 0.00 0.00 0.00 3.72
4263 8497 3.927142 GTGTAGTCTGCTCCAACATACAC 59.073 47.826 0.00 0.00 36.05 2.90
4264 8498 3.056107 GGTGTAGTCTGCTCCAACATACA 60.056 47.826 4.35 0.00 0.00 2.29
4265 8499 3.056107 TGGTGTAGTCTGCTCCAACATAC 60.056 47.826 9.04 0.00 0.00 2.39
4266 8500 3.169908 TGGTGTAGTCTGCTCCAACATA 58.830 45.455 9.04 0.00 0.00 2.29
4267 8501 1.977854 TGGTGTAGTCTGCTCCAACAT 59.022 47.619 9.04 0.00 0.00 2.71
4268 8502 1.419381 TGGTGTAGTCTGCTCCAACA 58.581 50.000 9.04 0.00 0.00 3.33
4269 8503 2.744202 CAATGGTGTAGTCTGCTCCAAC 59.256 50.000 14.57 0.00 33.89 3.77
4270 8504 2.875672 GCAATGGTGTAGTCTGCTCCAA 60.876 50.000 14.57 0.91 33.89 3.53
4271 8505 1.339055 GCAATGGTGTAGTCTGCTCCA 60.339 52.381 13.21 13.21 34.55 3.86
4272 8506 1.339055 TGCAATGGTGTAGTCTGCTCC 60.339 52.381 2.35 2.35 34.10 4.70
4273 8507 1.734465 GTGCAATGGTGTAGTCTGCTC 59.266 52.381 0.00 0.00 34.10 4.26
4274 8508 1.072173 TGTGCAATGGTGTAGTCTGCT 59.928 47.619 0.00 0.00 34.10 4.24
4275 8509 1.522668 TGTGCAATGGTGTAGTCTGC 58.477 50.000 0.00 0.00 0.00 4.26
4276 8510 4.758688 TCTATGTGCAATGGTGTAGTCTG 58.241 43.478 0.00 0.00 0.00 3.51
4277 8511 5.620738 ATCTATGTGCAATGGTGTAGTCT 57.379 39.130 0.00 0.00 0.00 3.24
4278 8512 6.516718 AGTATCTATGTGCAATGGTGTAGTC 58.483 40.000 0.00 0.00 0.00 2.59
4279 8513 6.485830 AGTATCTATGTGCAATGGTGTAGT 57.514 37.500 0.00 0.00 0.00 2.73
4280 8514 6.425114 GGAAGTATCTATGTGCAATGGTGTAG 59.575 42.308 0.00 0.00 0.00 2.74
4281 8515 6.126911 TGGAAGTATCTATGTGCAATGGTGTA 60.127 38.462 0.00 0.00 0.00 2.90
4282 8516 5.126067 GGAAGTATCTATGTGCAATGGTGT 58.874 41.667 0.00 0.00 0.00 4.16
4283 8517 5.125356 TGGAAGTATCTATGTGCAATGGTG 58.875 41.667 0.00 0.00 0.00 4.17
4284 8518 5.372343 TGGAAGTATCTATGTGCAATGGT 57.628 39.130 0.00 0.00 0.00 3.55
4285 8519 6.889301 ATTGGAAGTATCTATGTGCAATGG 57.111 37.500 0.00 0.00 0.00 3.16
4286 8520 9.223099 TCATATTGGAAGTATCTATGTGCAATG 57.777 33.333 0.00 0.00 0.00 2.82
4287 8521 9.970553 ATCATATTGGAAGTATCTATGTGCAAT 57.029 29.630 0.00 0.00 0.00 3.56
4288 8522 9.223099 CATCATATTGGAAGTATCTATGTGCAA 57.777 33.333 0.00 0.00 0.00 4.08
4289 8523 7.825761 CCATCATATTGGAAGTATCTATGTGCA 59.174 37.037 0.00 0.00 39.25 4.57
4290 8524 7.201679 GCCATCATATTGGAAGTATCTATGTGC 60.202 40.741 0.00 0.00 39.25 4.57
4291 8525 7.281774 GGCCATCATATTGGAAGTATCTATGTG 59.718 40.741 0.00 0.00 39.25 3.21
4292 8526 7.037370 TGGCCATCATATTGGAAGTATCTATGT 60.037 37.037 0.00 0.00 39.25 2.29
4293 8527 7.281774 GTGGCCATCATATTGGAAGTATCTATG 59.718 40.741 9.72 0.00 39.25 2.23
4294 8528 7.183475 AGTGGCCATCATATTGGAAGTATCTAT 59.817 37.037 9.72 0.00 39.25 1.98
4295 8529 6.501805 AGTGGCCATCATATTGGAAGTATCTA 59.498 38.462 9.72 0.00 39.25 1.98
4296 8530 5.311649 AGTGGCCATCATATTGGAAGTATCT 59.688 40.000 9.72 0.00 39.25 1.98
4297 8531 5.564550 AGTGGCCATCATATTGGAAGTATC 58.435 41.667 9.72 0.00 39.25 2.24
4298 8532 5.589367 AGTGGCCATCATATTGGAAGTAT 57.411 39.130 9.72 0.00 39.25 2.12
4299 8533 6.508030 TTAGTGGCCATCATATTGGAAGTA 57.492 37.500 9.72 0.00 39.25 2.24
4300 8534 3.959495 AGTGGCCATCATATTGGAAGT 57.041 42.857 9.72 0.00 39.25 3.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.