Multiple sequence alignment - TraesCS4A01G383800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G383800 chr4A 100.000 2549 0 0 1 2549 661625614 661623066 0.000000e+00 4708
1 TraesCS4A01G383800 chr6B 98.637 1981 21 3 570 2549 660437744 660435769 0.000000e+00 3504
2 TraesCS4A01G383800 chr6B 91.036 357 22 7 5 351 569981939 569981583 8.250000e-130 473
3 TraesCS4A01G383800 chr6B 94.068 236 10 3 341 574 399030590 399030357 3.120000e-94 355
4 TraesCS4A01G383800 chr7A 98.343 1992 26 5 560 2549 701581931 701583917 0.000000e+00 3489
5 TraesCS4A01G383800 chr3B 98.485 1980 26 2 570 2549 379294092 379296067 0.000000e+00 3487
6 TraesCS4A01G383800 chr3B 90.113 354 34 1 1 353 44121261 44121614 2.310000e-125 459
7 TraesCS4A01G383800 chr6A 98.581 1973 21 4 570 2540 617222870 617220903 0.000000e+00 3482
8 TraesCS4A01G383800 chr2B 98.291 1989 28 5 562 2549 4739869 4741852 0.000000e+00 3480
9 TraesCS4A01G383800 chr2B 94.372 231 11 1 350 580 263685805 263685577 1.120000e-93 353
10 TraesCS4A01G383800 chr7B 98.338 1985 26 5 566 2548 692881446 692883425 0.000000e+00 3476
11 TraesCS4A01G383800 chr7B 98.335 1982 26 4 571 2549 552932143 552930166 0.000000e+00 3470
12 TraesCS4A01G383800 chr7B 90.331 362 25 2 1 352 99873565 99873926 1.380000e-127 466
13 TraesCS4A01G383800 chr3A 98.333 1980 29 3 571 2549 722406047 722404071 0.000000e+00 3470
14 TraesCS4A01G383800 chr1A 98.335 1982 26 5 569 2549 22791527 22793502 0.000000e+00 3470
15 TraesCS4A01G383800 chr5D 91.436 362 21 5 1 352 550803955 550804316 2.950000e-134 488
16 TraesCS4A01G383800 chrUn 89.503 362 28 4 1 352 37684789 37684428 1.390000e-122 449
17 TraesCS4A01G383800 chrUn 89.474 361 29 5 1 352 36910228 36910588 5.000000e-122 448
18 TraesCS4A01G383800 chr6D 89.503 362 28 2 1 352 451213138 451213499 1.390000e-122 449
19 TraesCS4A01G383800 chr3D 89.802 353 32 4 3 352 15832814 15833165 1.390000e-122 449
20 TraesCS4A01G383800 chr4B 88.669 353 39 1 1 352 561377768 561378120 1.810000e-116 429
21 TraesCS4A01G383800 chr4B 95.154 227 9 1 348 574 407923016 407922792 8.670000e-95 357
22 TraesCS4A01G383800 chr4B 95.154 227 8 2 348 574 246337898 246338121 3.120000e-94 355
23 TraesCS4A01G383800 chr5B 95.946 222 7 1 353 574 244367856 244368075 2.410000e-95 359
24 TraesCS4A01G383800 chr1B 95.154 227 9 1 348 574 137314445 137314221 8.670000e-95 357
25 TraesCS4A01G383800 chr1B 95.154 227 9 1 348 574 609987767 609987543 8.670000e-95 357
26 TraesCS4A01G383800 chr2A 93.277 238 13 2 338 574 128554762 128554997 5.220000e-92 348
27 TraesCS4A01G383800 chr4D 92.245 245 16 2 330 574 13707757 13707516 6.750000e-91 344


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G383800 chr4A 661623066 661625614 2548 True 4708 4708 100.000 1 2549 1 chr4A.!!$R1 2548
1 TraesCS4A01G383800 chr6B 660435769 660437744 1975 True 3504 3504 98.637 570 2549 1 chr6B.!!$R3 1979
2 TraesCS4A01G383800 chr7A 701581931 701583917 1986 False 3489 3489 98.343 560 2549 1 chr7A.!!$F1 1989
3 TraesCS4A01G383800 chr3B 379294092 379296067 1975 False 3487 3487 98.485 570 2549 1 chr3B.!!$F2 1979
4 TraesCS4A01G383800 chr6A 617220903 617222870 1967 True 3482 3482 98.581 570 2540 1 chr6A.!!$R1 1970
5 TraesCS4A01G383800 chr2B 4739869 4741852 1983 False 3480 3480 98.291 562 2549 1 chr2B.!!$F1 1987
6 TraesCS4A01G383800 chr7B 692881446 692883425 1979 False 3476 3476 98.338 566 2548 1 chr7B.!!$F2 1982
7 TraesCS4A01G383800 chr7B 552930166 552932143 1977 True 3470 3470 98.335 571 2549 1 chr7B.!!$R1 1978
8 TraesCS4A01G383800 chr3A 722404071 722406047 1976 True 3470 3470 98.333 571 2549 1 chr3A.!!$R1 1978
9 TraesCS4A01G383800 chr1A 22791527 22793502 1975 False 3470 3470 98.335 569 2549 1 chr1A.!!$F1 1980

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
137 138 0.027324 GTTACCGTACGAGAGGAGCG 59.973 60.0 18.76 0.0 0.0 5.03 F
400 401 0.037975 GATGTTGTTGGGCCTGCAAG 60.038 55.0 4.53 0.0 0.0 4.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1121 1124 1.616865 AGAACGGACGATTCTGGTTCA 59.383 47.619 0.00 0.0 37.49 3.18 R
2211 2221 1.679977 TCCTAGCGGTTACCAGCGT 60.680 57.895 1.13 0.0 45.98 5.07 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.116878 CTGCTCCGCCTCTTAAGC 57.883 61.111 0.00 0.00 35.31 3.09
18 19 1.219124 CTGCTCCGCCTCTTAAGCA 59.781 57.895 0.00 0.00 42.16 3.91
19 20 0.391661 CTGCTCCGCCTCTTAAGCAA 60.392 55.000 0.00 0.00 43.61 3.91
20 21 0.253044 TGCTCCGCCTCTTAAGCAAT 59.747 50.000 0.00 0.00 41.50 3.56
21 22 0.659957 GCTCCGCCTCTTAAGCAATG 59.340 55.000 0.00 0.00 34.86 2.82
22 23 1.743772 GCTCCGCCTCTTAAGCAATGA 60.744 52.381 0.00 0.00 34.86 2.57
23 24 2.632377 CTCCGCCTCTTAAGCAATGAA 58.368 47.619 0.00 0.00 0.00 2.57
24 25 3.009723 CTCCGCCTCTTAAGCAATGAAA 58.990 45.455 0.00 0.00 0.00 2.69
25 26 3.009723 TCCGCCTCTTAAGCAATGAAAG 58.990 45.455 0.00 0.00 0.00 2.62
26 27 3.009723 CCGCCTCTTAAGCAATGAAAGA 58.990 45.455 0.00 0.00 0.00 2.52
27 28 3.440173 CCGCCTCTTAAGCAATGAAAGAA 59.560 43.478 0.00 0.00 0.00 2.52
28 29 4.437930 CCGCCTCTTAAGCAATGAAAGAAG 60.438 45.833 0.00 0.00 0.00 2.85
29 30 4.393062 CGCCTCTTAAGCAATGAAAGAAGA 59.607 41.667 0.00 0.00 0.00 2.87
30 31 5.635866 GCCTCTTAAGCAATGAAAGAAGAC 58.364 41.667 0.00 0.00 0.00 3.01
31 32 5.182001 GCCTCTTAAGCAATGAAAGAAGACA 59.818 40.000 0.00 0.00 0.00 3.41
32 33 6.622462 GCCTCTTAAGCAATGAAAGAAGACAG 60.622 42.308 0.00 0.00 0.00 3.51
33 34 6.246420 TCTTAAGCAATGAAAGAAGACAGC 57.754 37.500 0.00 0.00 0.00 4.40
34 35 3.930634 AAGCAATGAAAGAAGACAGCC 57.069 42.857 0.00 0.00 0.00 4.85
35 36 1.808945 AGCAATGAAAGAAGACAGCCG 59.191 47.619 0.00 0.00 0.00 5.52
36 37 1.730446 GCAATGAAAGAAGACAGCCGC 60.730 52.381 0.00 0.00 0.00 6.53
37 38 1.536766 CAATGAAAGAAGACAGCCGCA 59.463 47.619 0.00 0.00 0.00 5.69
38 39 1.446907 ATGAAAGAAGACAGCCGCAG 58.553 50.000 0.00 0.00 0.00 5.18
39 40 1.230635 TGAAAGAAGACAGCCGCAGC 61.231 55.000 0.00 0.00 40.32 5.25
40 41 1.916697 GAAAGAAGACAGCCGCAGCC 61.917 60.000 0.00 0.00 41.25 4.85
41 42 4.749310 AGAAGACAGCCGCAGCCG 62.749 66.667 0.00 0.00 41.25 5.52
73 74 1.465794 GCGGTATAGCTAGAGGAGGG 58.534 60.000 0.00 0.00 0.00 4.30
74 75 1.004511 GCGGTATAGCTAGAGGAGGGA 59.995 57.143 0.00 0.00 0.00 4.20
75 76 2.942306 GCGGTATAGCTAGAGGAGGGAG 60.942 59.091 0.00 0.00 0.00 4.30
76 77 2.356330 CGGTATAGCTAGAGGAGGGAGG 60.356 59.091 0.00 0.00 0.00 4.30
77 78 2.622190 GGTATAGCTAGAGGAGGGAGGC 60.622 59.091 0.00 0.00 0.00 4.70
78 79 1.162505 ATAGCTAGAGGAGGGAGGCA 58.837 55.000 0.00 0.00 0.00 4.75
79 80 0.934446 TAGCTAGAGGAGGGAGGCAA 59.066 55.000 0.00 0.00 0.00 4.52
80 81 0.267356 AGCTAGAGGAGGGAGGCAAT 59.733 55.000 0.00 0.00 0.00 3.56
81 82 1.505538 AGCTAGAGGAGGGAGGCAATA 59.494 52.381 0.00 0.00 0.00 1.90
82 83 1.621317 GCTAGAGGAGGGAGGCAATAC 59.379 57.143 0.00 0.00 0.00 1.89
83 84 2.964209 CTAGAGGAGGGAGGCAATACA 58.036 52.381 0.00 0.00 0.00 2.29
84 85 1.799933 AGAGGAGGGAGGCAATACAG 58.200 55.000 0.00 0.00 0.00 2.74
85 86 1.292242 AGAGGAGGGAGGCAATACAGA 59.708 52.381 0.00 0.00 0.00 3.41
86 87 2.090267 AGAGGAGGGAGGCAATACAGAT 60.090 50.000 0.00 0.00 0.00 2.90
87 88 3.142977 AGAGGAGGGAGGCAATACAGATA 59.857 47.826 0.00 0.00 0.00 1.98
88 89 3.243724 AGGAGGGAGGCAATACAGATAC 58.756 50.000 0.00 0.00 0.00 2.24
89 90 2.028930 GGAGGGAGGCAATACAGATACG 60.029 54.545 0.00 0.00 0.00 3.06
90 91 1.971357 AGGGAGGCAATACAGATACGG 59.029 52.381 0.00 0.00 0.00 4.02
91 92 1.692519 GGGAGGCAATACAGATACGGT 59.307 52.381 0.00 0.00 0.00 4.83
92 93 2.288886 GGGAGGCAATACAGATACGGTC 60.289 54.545 0.00 0.00 0.00 4.79
93 94 2.288886 GGAGGCAATACAGATACGGTCC 60.289 54.545 0.00 0.00 0.00 4.46
94 95 2.364324 GAGGCAATACAGATACGGTCCA 59.636 50.000 0.00 0.00 0.00 4.02
95 96 2.972713 AGGCAATACAGATACGGTCCAT 59.027 45.455 0.00 0.00 0.00 3.41
96 97 3.006967 AGGCAATACAGATACGGTCCATC 59.993 47.826 0.00 0.00 0.00 3.51
97 98 2.987149 GCAATACAGATACGGTCCATCG 59.013 50.000 0.00 0.00 0.00 3.84
98 99 3.552273 GCAATACAGATACGGTCCATCGT 60.552 47.826 0.00 0.00 45.88 3.73
99 100 4.227538 CAATACAGATACGGTCCATCGTC 58.772 47.826 0.00 0.00 42.82 4.20
100 101 2.054232 ACAGATACGGTCCATCGTCT 57.946 50.000 0.00 0.00 42.82 4.18
101 102 3.204306 ACAGATACGGTCCATCGTCTA 57.796 47.619 0.00 0.00 42.82 2.59
102 103 3.752665 ACAGATACGGTCCATCGTCTAT 58.247 45.455 0.00 0.00 42.82 1.98
103 104 3.752222 ACAGATACGGTCCATCGTCTATC 59.248 47.826 0.00 0.00 42.82 2.08
104 105 3.751698 CAGATACGGTCCATCGTCTATCA 59.248 47.826 0.00 0.00 42.82 2.15
105 106 4.215613 CAGATACGGTCCATCGTCTATCAA 59.784 45.833 0.00 0.00 42.82 2.57
106 107 5.010933 AGATACGGTCCATCGTCTATCAAT 58.989 41.667 0.00 0.00 42.82 2.57
107 108 3.644884 ACGGTCCATCGTCTATCAATC 57.355 47.619 0.00 0.00 39.34 2.67
108 109 2.296471 ACGGTCCATCGTCTATCAATCC 59.704 50.000 0.00 0.00 39.34 3.01
109 110 2.558795 CGGTCCATCGTCTATCAATCCT 59.441 50.000 0.00 0.00 0.00 3.24
110 111 3.366476 CGGTCCATCGTCTATCAATCCTC 60.366 52.174 0.00 0.00 0.00 3.71
111 112 3.829601 GGTCCATCGTCTATCAATCCTCT 59.170 47.826 0.00 0.00 0.00 3.69
112 113 5.010933 GGTCCATCGTCTATCAATCCTCTA 58.989 45.833 0.00 0.00 0.00 2.43
113 114 5.124776 GGTCCATCGTCTATCAATCCTCTAG 59.875 48.000 0.00 0.00 0.00 2.43
114 115 5.941058 GTCCATCGTCTATCAATCCTCTAGA 59.059 44.000 0.00 0.00 0.00 2.43
115 116 6.093495 GTCCATCGTCTATCAATCCTCTAGAG 59.907 46.154 13.18 13.18 0.00 2.43
116 117 6.013293 TCCATCGTCTATCAATCCTCTAGAGA 60.013 42.308 21.76 7.77 0.00 3.10
117 118 6.657117 CCATCGTCTATCAATCCTCTAGAGAA 59.343 42.308 21.76 0.00 0.00 2.87
118 119 7.148255 CCATCGTCTATCAATCCTCTAGAGAAG 60.148 44.444 21.76 5.49 0.00 2.85
119 120 6.833041 TCGTCTATCAATCCTCTAGAGAAGT 58.167 40.000 21.76 0.00 0.00 3.01
120 121 7.284074 TCGTCTATCAATCCTCTAGAGAAGTT 58.716 38.462 21.76 9.50 0.00 2.66
121 122 8.430431 TCGTCTATCAATCCTCTAGAGAAGTTA 58.570 37.037 21.76 4.08 0.00 2.24
122 123 8.500773 CGTCTATCAATCCTCTAGAGAAGTTAC 58.499 40.741 21.76 6.42 0.00 2.50
123 124 8.789762 GTCTATCAATCCTCTAGAGAAGTTACC 58.210 40.741 21.76 0.00 0.00 2.85
124 125 6.642707 ATCAATCCTCTAGAGAAGTTACCG 57.357 41.667 21.76 1.70 0.00 4.02
125 126 5.507637 TCAATCCTCTAGAGAAGTTACCGT 58.492 41.667 21.76 0.00 0.00 4.83
126 127 6.656902 TCAATCCTCTAGAGAAGTTACCGTA 58.343 40.000 21.76 0.00 0.00 4.02
127 128 6.541641 TCAATCCTCTAGAGAAGTTACCGTAC 59.458 42.308 21.76 0.00 0.00 3.67
128 129 4.437239 TCCTCTAGAGAAGTTACCGTACG 58.563 47.826 21.76 8.69 0.00 3.67
129 130 4.160439 TCCTCTAGAGAAGTTACCGTACGA 59.840 45.833 21.76 2.02 0.00 3.43
130 131 4.507388 CCTCTAGAGAAGTTACCGTACGAG 59.493 50.000 21.76 9.56 0.00 4.18
131 132 5.330455 TCTAGAGAAGTTACCGTACGAGA 57.670 43.478 18.76 3.72 0.00 4.04
132 133 5.347342 TCTAGAGAAGTTACCGTACGAGAG 58.653 45.833 18.76 2.16 0.00 3.20
133 134 3.269178 AGAGAAGTTACCGTACGAGAGG 58.731 50.000 18.76 1.74 0.00 3.69
134 135 3.055530 AGAGAAGTTACCGTACGAGAGGA 60.056 47.826 18.76 0.00 0.00 3.71
135 136 3.269178 AGAAGTTACCGTACGAGAGGAG 58.731 50.000 18.76 0.48 0.00 3.69
136 137 1.377536 AGTTACCGTACGAGAGGAGC 58.622 55.000 18.76 0.00 0.00 4.70
137 138 0.027324 GTTACCGTACGAGAGGAGCG 59.973 60.000 18.76 0.00 0.00 5.03
138 139 0.108186 TTACCGTACGAGAGGAGCGA 60.108 55.000 18.76 0.00 0.00 4.93
139 140 0.529337 TACCGTACGAGAGGAGCGAG 60.529 60.000 18.76 0.00 0.00 5.03
140 141 2.535788 CCGTACGAGAGGAGCGAGG 61.536 68.421 18.76 0.00 0.00 4.63
141 142 1.521010 CGTACGAGAGGAGCGAGGA 60.521 63.158 10.44 0.00 0.00 3.71
142 143 1.492319 CGTACGAGAGGAGCGAGGAG 61.492 65.000 10.44 0.00 0.00 3.69
143 144 1.146485 TACGAGAGGAGCGAGGAGG 59.854 63.158 0.00 0.00 0.00 4.30
144 145 1.335882 TACGAGAGGAGCGAGGAGGA 61.336 60.000 0.00 0.00 0.00 3.71
145 146 1.452289 CGAGAGGAGCGAGGAGGAA 60.452 63.158 0.00 0.00 0.00 3.36
146 147 1.032657 CGAGAGGAGCGAGGAGGAAA 61.033 60.000 0.00 0.00 0.00 3.13
147 148 1.187087 GAGAGGAGCGAGGAGGAAAA 58.813 55.000 0.00 0.00 0.00 2.29
148 149 0.899019 AGAGGAGCGAGGAGGAAAAC 59.101 55.000 0.00 0.00 0.00 2.43
149 150 0.608640 GAGGAGCGAGGAGGAAAACA 59.391 55.000 0.00 0.00 0.00 2.83
150 151 1.002087 GAGGAGCGAGGAGGAAAACAA 59.998 52.381 0.00 0.00 0.00 2.83
151 152 1.420138 AGGAGCGAGGAGGAAAACAAA 59.580 47.619 0.00 0.00 0.00 2.83
152 153 2.158667 AGGAGCGAGGAGGAAAACAAAA 60.159 45.455 0.00 0.00 0.00 2.44
153 154 2.621526 GGAGCGAGGAGGAAAACAAAAA 59.378 45.455 0.00 0.00 0.00 1.94
154 155 3.304726 GGAGCGAGGAGGAAAACAAAAAG 60.305 47.826 0.00 0.00 0.00 2.27
155 156 3.551846 AGCGAGGAGGAAAACAAAAAGA 58.448 40.909 0.00 0.00 0.00 2.52
156 157 4.145052 AGCGAGGAGGAAAACAAAAAGAT 58.855 39.130 0.00 0.00 0.00 2.40
157 158 4.216472 AGCGAGGAGGAAAACAAAAAGATC 59.784 41.667 0.00 0.00 0.00 2.75
158 159 4.216472 GCGAGGAGGAAAACAAAAAGATCT 59.784 41.667 0.00 0.00 0.00 2.75
159 160 5.693814 CGAGGAGGAAAACAAAAAGATCTG 58.306 41.667 0.00 0.00 0.00 2.90
160 161 5.239525 CGAGGAGGAAAACAAAAAGATCTGT 59.760 40.000 0.00 0.00 0.00 3.41
161 162 6.396829 AGGAGGAAAACAAAAAGATCTGTG 57.603 37.500 0.00 0.00 0.00 3.66
162 163 6.129179 AGGAGGAAAACAAAAAGATCTGTGA 58.871 36.000 0.00 0.00 0.00 3.58
163 164 6.607198 AGGAGGAAAACAAAAAGATCTGTGAA 59.393 34.615 0.00 0.00 0.00 3.18
164 165 6.920210 GGAGGAAAACAAAAAGATCTGTGAAG 59.080 38.462 0.00 0.00 0.00 3.02
165 166 6.809869 AGGAAAACAAAAAGATCTGTGAAGG 58.190 36.000 0.00 0.00 0.00 3.46
166 167 5.463392 GGAAAACAAAAAGATCTGTGAAGGC 59.537 40.000 0.00 0.00 0.00 4.35
167 168 4.590850 AACAAAAAGATCTGTGAAGGCC 57.409 40.909 0.00 0.00 0.00 5.19
168 169 3.565307 ACAAAAAGATCTGTGAAGGCCA 58.435 40.909 5.01 0.00 0.00 5.36
169 170 3.960102 ACAAAAAGATCTGTGAAGGCCAA 59.040 39.130 5.01 0.00 0.00 4.52
170 171 4.038402 ACAAAAAGATCTGTGAAGGCCAAG 59.962 41.667 5.01 0.00 0.00 3.61
171 172 3.515602 AAAGATCTGTGAAGGCCAAGT 57.484 42.857 5.01 0.00 0.00 3.16
172 173 2.486472 AGATCTGTGAAGGCCAAGTG 57.514 50.000 5.01 0.00 0.00 3.16
173 174 1.980765 AGATCTGTGAAGGCCAAGTGA 59.019 47.619 5.01 0.00 0.00 3.41
174 175 2.373169 AGATCTGTGAAGGCCAAGTGAA 59.627 45.455 5.01 0.00 0.00 3.18
175 176 2.957402 TCTGTGAAGGCCAAGTGAAT 57.043 45.000 5.01 0.00 0.00 2.57
176 177 2.507484 TCTGTGAAGGCCAAGTGAATG 58.493 47.619 5.01 0.00 0.00 2.67
177 178 2.106338 TCTGTGAAGGCCAAGTGAATGA 59.894 45.455 5.01 0.00 0.00 2.57
178 179 2.227388 CTGTGAAGGCCAAGTGAATGAC 59.773 50.000 5.01 0.00 0.00 3.06
179 180 2.158623 TGTGAAGGCCAAGTGAATGACT 60.159 45.455 5.01 0.00 35.94 3.41
180 181 2.887152 GTGAAGGCCAAGTGAATGACTT 59.113 45.455 5.01 0.00 46.52 3.01
181 182 3.057946 GTGAAGGCCAAGTGAATGACTTC 60.058 47.826 5.01 0.00 43.52 3.01
182 183 3.181440 TGAAGGCCAAGTGAATGACTTCT 60.181 43.478 5.01 0.00 43.52 2.85
183 184 3.515602 AGGCCAAGTGAATGACTTCTT 57.484 42.857 5.01 0.00 43.52 2.52
184 185 3.837355 AGGCCAAGTGAATGACTTCTTT 58.163 40.909 5.01 0.00 43.52 2.52
185 186 3.571401 AGGCCAAGTGAATGACTTCTTTG 59.429 43.478 5.01 0.00 43.52 2.77
186 187 3.569701 GGCCAAGTGAATGACTTCTTTGA 59.430 43.478 0.00 0.00 43.52 2.69
187 188 4.037923 GGCCAAGTGAATGACTTCTTTGAA 59.962 41.667 0.00 0.00 43.52 2.69
188 189 5.279156 GGCCAAGTGAATGACTTCTTTGAAT 60.279 40.000 0.00 0.00 43.52 2.57
189 190 5.860716 GCCAAGTGAATGACTTCTTTGAATC 59.139 40.000 0.00 0.00 43.52 2.52
190 191 6.082338 CCAAGTGAATGACTTCTTTGAATCG 58.918 40.000 0.00 0.00 43.52 3.34
191 192 5.869753 AGTGAATGACTTCTTTGAATCGG 57.130 39.130 0.00 0.00 32.29 4.18
192 193 5.308825 AGTGAATGACTTCTTTGAATCGGT 58.691 37.500 0.00 0.00 32.29 4.69
193 194 5.180117 AGTGAATGACTTCTTTGAATCGGTG 59.820 40.000 0.00 0.00 32.29 4.94
194 195 5.179368 GTGAATGACTTCTTTGAATCGGTGA 59.821 40.000 0.00 0.00 32.29 4.02
195 196 5.762711 TGAATGACTTCTTTGAATCGGTGAA 59.237 36.000 0.00 0.00 32.29 3.18
196 197 6.262049 TGAATGACTTCTTTGAATCGGTGAAA 59.738 34.615 0.00 0.00 32.29 2.69
197 198 5.673337 TGACTTCTTTGAATCGGTGAAAG 57.327 39.130 0.00 0.00 0.00 2.62
198 199 4.024048 TGACTTCTTTGAATCGGTGAAAGC 60.024 41.667 0.00 0.00 0.00 3.51
199 200 4.137543 ACTTCTTTGAATCGGTGAAAGCT 58.862 39.130 0.00 0.00 0.00 3.74
200 201 5.305585 ACTTCTTTGAATCGGTGAAAGCTA 58.694 37.500 0.00 0.00 0.00 3.32
201 202 5.763204 ACTTCTTTGAATCGGTGAAAGCTAA 59.237 36.000 0.00 0.00 0.00 3.09
202 203 6.262273 ACTTCTTTGAATCGGTGAAAGCTAAA 59.738 34.615 0.00 0.00 0.00 1.85
203 204 6.627395 TCTTTGAATCGGTGAAAGCTAAAA 57.373 33.333 0.00 0.00 0.00 1.52
204 205 7.033530 TCTTTGAATCGGTGAAAGCTAAAAA 57.966 32.000 0.00 0.00 0.00 1.94
219 220 2.253513 AAAAACATCACCTCCGGCG 58.746 52.632 0.00 0.00 0.00 6.46
220 221 1.241315 AAAAACATCACCTCCGGCGG 61.241 55.000 22.51 22.51 0.00 6.13
221 222 2.119484 AAAACATCACCTCCGGCGGA 62.119 55.000 29.14 29.14 0.00 5.54
231 232 3.747735 TCCGGCGGAGAAGATAGAT 57.252 52.632 27.46 0.00 0.00 1.98
232 233 1.535833 TCCGGCGGAGAAGATAGATC 58.464 55.000 27.46 0.00 0.00 2.75
233 234 0.528470 CCGGCGGAGAAGATAGATCC 59.472 60.000 24.41 0.00 0.00 3.36
242 243 5.167845 GGAGAAGATAGATCCGATGAAAGC 58.832 45.833 0.00 0.00 0.00 3.51
243 244 5.279206 GGAGAAGATAGATCCGATGAAAGCA 60.279 44.000 0.00 0.00 0.00 3.91
244 245 6.166984 AGAAGATAGATCCGATGAAAGCAA 57.833 37.500 0.00 0.00 0.00 3.91
245 246 6.586344 AGAAGATAGATCCGATGAAAGCAAA 58.414 36.000 0.00 0.00 0.00 3.68
246 247 6.705381 AGAAGATAGATCCGATGAAAGCAAAG 59.295 38.462 0.00 0.00 0.00 2.77
247 248 4.754114 AGATAGATCCGATGAAAGCAAAGC 59.246 41.667 0.00 0.00 0.00 3.51
248 249 1.667724 AGATCCGATGAAAGCAAAGCG 59.332 47.619 0.00 0.00 0.00 4.68
249 250 0.099436 ATCCGATGAAAGCAAAGCGC 59.901 50.000 0.00 0.00 42.91 5.92
250 251 1.209898 CCGATGAAAGCAAAGCGCA 59.790 52.632 11.47 0.00 46.13 6.09
251 252 1.067199 CCGATGAAAGCAAAGCGCAC 61.067 55.000 11.47 0.00 46.13 5.34
252 253 0.110056 CGATGAAAGCAAAGCGCACT 60.110 50.000 11.47 0.00 46.13 4.40
253 254 1.664016 CGATGAAAGCAAAGCGCACTT 60.664 47.619 11.47 4.52 46.13 3.16
260 261 4.972591 AAAGCGCACTTTGGATGC 57.027 50.000 11.47 0.00 44.51 3.91
261 262 1.290009 AAAGCGCACTTTGGATGCC 59.710 52.632 11.47 0.00 44.51 4.40
262 263 2.158561 AAAGCGCACTTTGGATGCCC 62.159 55.000 11.47 0.00 44.51 5.36
263 264 3.064324 GCGCACTTTGGATGCCCT 61.064 61.111 0.30 0.00 40.09 5.19
264 265 2.879907 CGCACTTTGGATGCCCTG 59.120 61.111 0.00 0.00 40.09 4.45
265 266 2.575461 GCACTTTGGATGCCCTGC 59.425 61.111 0.00 0.00 37.08 4.85
266 267 2.277591 GCACTTTGGATGCCCTGCA 61.278 57.895 0.00 0.00 44.86 4.41
267 268 1.888018 CACTTTGGATGCCCTGCAG 59.112 57.895 6.78 6.78 43.65 4.41
268 269 1.980772 ACTTTGGATGCCCTGCAGC 60.981 57.895 8.66 0.00 43.65 5.25
269 270 3.060020 CTTTGGATGCCCTGCAGCG 62.060 63.158 8.66 0.00 46.62 5.18
270 271 3.565961 TTTGGATGCCCTGCAGCGA 62.566 57.895 8.66 0.00 46.62 4.93
271 272 4.783621 TGGATGCCCTGCAGCGAC 62.784 66.667 8.66 0.00 46.62 5.19
273 274 4.783621 GATGCCCTGCAGCGACCA 62.784 66.667 8.66 2.16 43.65 4.02
274 275 4.119363 ATGCCCTGCAGCGACCAT 62.119 61.111 8.66 4.58 43.65 3.55
275 276 4.783621 TGCCCTGCAGCGACCATC 62.784 66.667 8.66 0.00 33.32 3.51
276 277 4.783621 GCCCTGCAGCGACCATCA 62.784 66.667 8.66 0.00 0.00 3.07
277 278 2.821366 CCCTGCAGCGACCATCAC 60.821 66.667 8.66 0.00 0.00 3.06
278 279 2.821366 CCTGCAGCGACCATCACC 60.821 66.667 8.66 0.00 0.00 4.02
279 280 3.190849 CTGCAGCGACCATCACCG 61.191 66.667 0.00 0.00 0.00 4.94
297 298 3.640000 CGTCCGCCGCAATCCATC 61.640 66.667 0.00 0.00 0.00 3.51
298 299 2.203070 GTCCGCCGCAATCCATCT 60.203 61.111 0.00 0.00 0.00 2.90
299 300 1.069090 GTCCGCCGCAATCCATCTA 59.931 57.895 0.00 0.00 0.00 1.98
300 301 0.320771 GTCCGCCGCAATCCATCTAT 60.321 55.000 0.00 0.00 0.00 1.98
301 302 0.320683 TCCGCCGCAATCCATCTATG 60.321 55.000 0.00 0.00 0.00 2.23
302 303 0.320683 CCGCCGCAATCCATCTATGA 60.321 55.000 0.00 0.00 0.00 2.15
303 304 0.792640 CGCCGCAATCCATCTATGAC 59.207 55.000 0.00 0.00 0.00 3.06
304 305 1.160137 GCCGCAATCCATCTATGACC 58.840 55.000 0.00 0.00 0.00 4.02
305 306 1.432514 CCGCAATCCATCTATGACCG 58.567 55.000 0.00 0.00 0.00 4.79
306 307 0.792640 CGCAATCCATCTATGACCGC 59.207 55.000 0.00 0.00 0.00 5.68
307 308 1.873486 CGCAATCCATCTATGACCGCA 60.873 52.381 0.00 0.00 0.00 5.69
308 309 2.430465 GCAATCCATCTATGACCGCAT 58.570 47.619 0.00 0.00 38.54 4.73
309 310 2.417933 GCAATCCATCTATGACCGCATC 59.582 50.000 0.00 0.00 35.94 3.91
310 311 3.667360 CAATCCATCTATGACCGCATCA 58.333 45.455 0.00 0.00 43.13 3.07
312 313 4.564782 ATCCATCTATGACCGCATCATT 57.435 40.909 5.82 0.00 46.54 2.57
313 314 3.667360 TCCATCTATGACCGCATCATTG 58.333 45.455 5.82 4.74 46.54 2.82
314 315 3.324556 TCCATCTATGACCGCATCATTGA 59.675 43.478 12.33 12.33 46.54 2.57
315 316 4.067192 CCATCTATGACCGCATCATTGAA 58.933 43.478 13.46 2.11 46.54 2.69
316 317 4.516321 CCATCTATGACCGCATCATTGAAA 59.484 41.667 13.46 0.00 46.54 2.69
317 318 5.334646 CCATCTATGACCGCATCATTGAAAG 60.335 44.000 13.46 10.17 46.54 2.62
318 319 4.129380 TCTATGACCGCATCATTGAAAGG 58.871 43.478 5.82 0.00 46.54 3.11
319 320 1.462616 TGACCGCATCATTGAAAGGG 58.537 50.000 9.30 5.04 29.99 3.95
320 321 0.101219 GACCGCATCATTGAAAGGGC 59.899 55.000 9.30 3.73 0.00 5.19
321 322 0.611618 ACCGCATCATTGAAAGGGCA 60.612 50.000 9.30 0.00 0.00 5.36
322 323 0.748450 CCGCATCATTGAAAGGGCAT 59.252 50.000 0.00 0.00 0.00 4.40
323 324 1.955778 CCGCATCATTGAAAGGGCATA 59.044 47.619 0.00 0.00 0.00 3.14
324 325 2.559668 CCGCATCATTGAAAGGGCATAT 59.440 45.455 0.00 0.00 0.00 1.78
325 326 3.758023 CCGCATCATTGAAAGGGCATATA 59.242 43.478 0.00 0.00 0.00 0.86
326 327 4.218200 CCGCATCATTGAAAGGGCATATAA 59.782 41.667 0.00 0.00 0.00 0.98
327 328 5.396484 CGCATCATTGAAAGGGCATATAAG 58.604 41.667 0.00 0.00 0.00 1.73
328 329 5.620654 CGCATCATTGAAAGGGCATATAAGG 60.621 44.000 0.00 0.00 0.00 2.69
329 330 5.477984 GCATCATTGAAAGGGCATATAAGGA 59.522 40.000 0.00 0.00 0.00 3.36
330 331 6.015180 GCATCATTGAAAGGGCATATAAGGAA 60.015 38.462 0.00 0.00 0.00 3.36
331 332 7.600065 CATCATTGAAAGGGCATATAAGGAAG 58.400 38.462 0.00 0.00 0.00 3.46
332 333 5.536161 TCATTGAAAGGGCATATAAGGAAGC 59.464 40.000 0.00 0.00 0.00 3.86
333 334 4.518278 TGAAAGGGCATATAAGGAAGCA 57.482 40.909 0.00 0.00 0.00 3.91
334 335 4.464008 TGAAAGGGCATATAAGGAAGCAG 58.536 43.478 0.00 0.00 0.00 4.24
335 336 4.165950 TGAAAGGGCATATAAGGAAGCAGA 59.834 41.667 0.00 0.00 0.00 4.26
336 337 4.363991 AAGGGCATATAAGGAAGCAGAG 57.636 45.455 0.00 0.00 0.00 3.35
337 338 2.039613 AGGGCATATAAGGAAGCAGAGC 59.960 50.000 0.00 0.00 0.00 4.09
338 339 2.072298 GGCATATAAGGAAGCAGAGCG 58.928 52.381 0.00 0.00 0.00 5.03
339 340 2.072298 GCATATAAGGAAGCAGAGCGG 58.928 52.381 0.00 0.00 0.00 5.52
340 341 2.548920 GCATATAAGGAAGCAGAGCGGT 60.549 50.000 0.00 0.00 0.00 5.68
341 342 3.321497 CATATAAGGAAGCAGAGCGGTC 58.679 50.000 6.48 6.48 0.00 4.79
342 343 0.103208 ATAAGGAAGCAGAGCGGTCG 59.897 55.000 9.28 5.56 0.00 4.79
343 344 1.945354 TAAGGAAGCAGAGCGGTCGG 61.945 60.000 10.53 10.53 0.00 4.79
344 345 4.821589 GGAAGCAGAGCGGTCGGG 62.822 72.222 16.31 10.53 0.00 5.14
345 346 3.760035 GAAGCAGAGCGGTCGGGA 61.760 66.667 16.31 0.00 0.00 5.14
346 347 3.296709 GAAGCAGAGCGGTCGGGAA 62.297 63.158 16.31 0.00 0.00 3.97
347 348 3.302347 AAGCAGAGCGGTCGGGAAG 62.302 63.158 16.31 3.68 0.00 3.46
348 349 4.070552 GCAGAGCGGTCGGGAAGT 62.071 66.667 16.31 0.00 0.00 3.01
349 350 2.707849 GCAGAGCGGTCGGGAAGTA 61.708 63.158 16.31 0.00 0.00 2.24
350 351 1.139095 CAGAGCGGTCGGGAAGTAC 59.861 63.158 9.28 0.00 0.00 2.73
351 352 1.001145 AGAGCGGTCGGGAAGTACT 60.001 57.895 9.28 0.00 0.00 2.73
352 353 1.139095 GAGCGGTCGGGAAGTACTG 59.861 63.158 0.00 0.00 0.00 2.74
353 354 1.303888 AGCGGTCGGGAAGTACTGA 60.304 57.895 0.00 0.00 0.00 3.41
354 355 0.683504 AGCGGTCGGGAAGTACTGAT 60.684 55.000 0.00 0.00 0.00 2.90
355 356 0.527817 GCGGTCGGGAAGTACTGATG 60.528 60.000 0.00 0.00 0.00 3.07
356 357 0.815734 CGGTCGGGAAGTACTGATGT 59.184 55.000 0.00 0.00 0.00 3.06
357 358 1.202268 CGGTCGGGAAGTACTGATGTC 60.202 57.143 0.00 0.00 0.00 3.06
358 359 2.100989 GGTCGGGAAGTACTGATGTCT 58.899 52.381 0.00 0.00 0.00 3.41
359 360 3.285484 GGTCGGGAAGTACTGATGTCTA 58.715 50.000 0.00 0.00 0.00 2.59
360 361 3.066481 GGTCGGGAAGTACTGATGTCTAC 59.934 52.174 0.00 0.00 0.00 2.59
361 362 3.946558 GTCGGGAAGTACTGATGTCTACT 59.053 47.826 0.00 0.00 0.00 2.57
362 363 5.121811 GTCGGGAAGTACTGATGTCTACTA 58.878 45.833 0.00 0.00 0.00 1.82
363 364 5.007528 GTCGGGAAGTACTGATGTCTACTAC 59.992 48.000 0.00 0.00 0.00 2.73
364 365 4.880120 CGGGAAGTACTGATGTCTACTACA 59.120 45.833 0.00 0.00 43.86 2.74
365 366 5.220815 CGGGAAGTACTGATGTCTACTACAC 60.221 48.000 0.00 0.00 42.09 2.90
366 367 5.651139 GGGAAGTACTGATGTCTACTACACA 59.349 44.000 0.00 0.00 42.09 3.72
367 368 6.152323 GGGAAGTACTGATGTCTACTACACAA 59.848 42.308 0.00 0.00 42.09 3.33
368 369 7.028361 GGAAGTACTGATGTCTACTACACAAC 58.972 42.308 0.00 0.00 42.09 3.32
369 370 6.512342 AGTACTGATGTCTACTACACAACC 57.488 41.667 0.00 0.00 42.09 3.77
370 371 6.246919 AGTACTGATGTCTACTACACAACCT 58.753 40.000 0.00 0.00 42.09 3.50
371 372 6.720288 AGTACTGATGTCTACTACACAACCTT 59.280 38.462 0.00 0.00 42.09 3.50
372 373 6.026947 ACTGATGTCTACTACACAACCTTC 57.973 41.667 0.00 0.00 42.09 3.46
373 374 5.775701 ACTGATGTCTACTACACAACCTTCT 59.224 40.000 0.00 0.00 42.09 2.85
374 375 6.267928 ACTGATGTCTACTACACAACCTTCTT 59.732 38.462 0.00 0.00 42.09 2.52
375 376 6.688578 TGATGTCTACTACACAACCTTCTTC 58.311 40.000 0.00 0.00 42.09 2.87
376 377 6.493802 TGATGTCTACTACACAACCTTCTTCT 59.506 38.462 0.00 0.00 42.09 2.85
377 378 6.726490 TGTCTACTACACAACCTTCTTCTT 57.274 37.500 0.00 0.00 31.43 2.52
378 379 6.513180 TGTCTACTACACAACCTTCTTCTTG 58.487 40.000 0.00 0.00 31.43 3.02
379 380 6.097839 TGTCTACTACACAACCTTCTTCTTGT 59.902 38.462 0.00 0.00 31.43 3.16
380 381 7.286087 TGTCTACTACACAACCTTCTTCTTGTA 59.714 37.037 0.00 0.00 31.43 2.41
381 382 7.808856 GTCTACTACACAACCTTCTTCTTGTAG 59.191 40.741 5.27 5.27 41.37 2.74
382 383 6.726490 ACTACACAACCTTCTTCTTGTAGA 57.274 37.500 12.31 0.00 39.06 2.59
383 384 7.304497 ACTACACAACCTTCTTCTTGTAGAT 57.696 36.000 12.31 0.00 39.06 1.98
384 385 7.155328 ACTACACAACCTTCTTCTTGTAGATG 58.845 38.462 12.31 0.00 39.06 2.90
385 386 5.930135 ACACAACCTTCTTCTTGTAGATGT 58.070 37.500 0.00 0.00 0.00 3.06
386 387 6.357367 ACACAACCTTCTTCTTGTAGATGTT 58.643 36.000 0.00 0.00 0.00 2.71
387 388 6.260936 ACACAACCTTCTTCTTGTAGATGTTG 59.739 38.462 13.30 13.30 40.02 3.33
388 389 6.260936 CACAACCTTCTTCTTGTAGATGTTGT 59.739 38.462 14.10 14.10 43.62 3.32
389 390 6.828785 ACAACCTTCTTCTTGTAGATGTTGTT 59.171 34.615 14.10 0.00 42.06 2.83
390 391 6.867662 ACCTTCTTCTTGTAGATGTTGTTG 57.132 37.500 0.00 0.00 0.00 3.33
391 392 5.765182 ACCTTCTTCTTGTAGATGTTGTTGG 59.235 40.000 0.00 0.00 0.00 3.77
392 393 5.182001 CCTTCTTCTTGTAGATGTTGTTGGG 59.818 44.000 0.00 0.00 0.00 4.12
393 394 4.072131 TCTTCTTGTAGATGTTGTTGGGC 58.928 43.478 0.00 0.00 0.00 5.36
394 395 2.790433 TCTTGTAGATGTTGTTGGGCC 58.210 47.619 0.00 0.00 0.00 5.80
395 396 2.375174 TCTTGTAGATGTTGTTGGGCCT 59.625 45.455 4.53 0.00 0.00 5.19
396 397 2.198827 TGTAGATGTTGTTGGGCCTG 57.801 50.000 4.53 0.00 0.00 4.85
397 398 0.811281 GTAGATGTTGTTGGGCCTGC 59.189 55.000 4.53 0.00 0.00 4.85
398 399 0.403655 TAGATGTTGTTGGGCCTGCA 59.596 50.000 4.53 0.00 0.00 4.41
399 400 0.469705 AGATGTTGTTGGGCCTGCAA 60.470 50.000 4.53 7.18 0.00 4.08
400 401 0.037975 GATGTTGTTGGGCCTGCAAG 60.038 55.000 4.53 0.00 0.00 4.01
401 402 0.760189 ATGTTGTTGGGCCTGCAAGT 60.760 50.000 4.53 0.00 0.00 3.16
402 403 1.067916 GTTGTTGGGCCTGCAAGTG 59.932 57.895 4.53 0.00 0.00 3.16
403 404 2.795110 TTGTTGGGCCTGCAAGTGC 61.795 57.895 4.53 0.00 42.50 4.40
416 417 2.119457 GCAAGTGCACAAGTTTGTAGC 58.881 47.619 21.04 5.26 39.91 3.58
417 418 2.479389 GCAAGTGCACAAGTTTGTAGCA 60.479 45.455 21.04 13.97 39.91 3.49
421 422 2.364632 TGCACAAGTTTGTAGCACAGT 58.635 42.857 13.97 0.00 39.91 3.55
422 423 3.536570 TGCACAAGTTTGTAGCACAGTA 58.463 40.909 13.97 0.00 39.91 2.74
423 424 3.559655 TGCACAAGTTTGTAGCACAGTAG 59.440 43.478 13.97 0.00 39.91 2.57
424 425 3.607078 GCACAAGTTTGTAGCACAGTAGC 60.607 47.826 11.73 0.00 39.91 3.58
425 426 3.559655 CACAAGTTTGTAGCACAGTAGCA 59.440 43.478 0.00 0.00 39.91 3.49
426 427 4.035091 CACAAGTTTGTAGCACAGTAGCAA 59.965 41.667 0.00 0.00 39.91 3.91
427 428 4.273480 ACAAGTTTGTAGCACAGTAGCAAG 59.727 41.667 0.00 0.00 40.16 4.01
428 429 4.073293 AGTTTGTAGCACAGTAGCAAGT 57.927 40.909 0.00 0.00 36.85 3.16
429 430 4.451900 AGTTTGTAGCACAGTAGCAAGTT 58.548 39.130 0.00 0.00 36.85 2.66
430 431 4.881850 AGTTTGTAGCACAGTAGCAAGTTT 59.118 37.500 0.00 0.00 36.85 2.66
431 432 5.007724 AGTTTGTAGCACAGTAGCAAGTTTC 59.992 40.000 0.00 0.00 36.85 2.78
432 433 3.399330 TGTAGCACAGTAGCAAGTTTCC 58.601 45.455 0.00 0.00 36.85 3.13
433 434 2.938956 AGCACAGTAGCAAGTTTCCT 57.061 45.000 0.00 0.00 36.85 3.36
434 435 3.214696 AGCACAGTAGCAAGTTTCCTT 57.785 42.857 0.00 0.00 36.85 3.36
435 436 3.142174 AGCACAGTAGCAAGTTTCCTTC 58.858 45.455 0.00 0.00 36.85 3.46
436 437 2.878406 GCACAGTAGCAAGTTTCCTTCA 59.122 45.455 0.00 0.00 0.00 3.02
437 438 3.315191 GCACAGTAGCAAGTTTCCTTCAA 59.685 43.478 0.00 0.00 0.00 2.69
438 439 4.555511 GCACAGTAGCAAGTTTCCTTCAAG 60.556 45.833 0.00 0.00 0.00 3.02
439 440 4.576463 CACAGTAGCAAGTTTCCTTCAAGT 59.424 41.667 0.00 0.00 0.00 3.16
440 441 4.576463 ACAGTAGCAAGTTTCCTTCAAGTG 59.424 41.667 0.00 0.00 0.00 3.16
441 442 4.023707 CAGTAGCAAGTTTCCTTCAAGTGG 60.024 45.833 0.00 0.00 0.00 4.00
442 443 3.297134 AGCAAGTTTCCTTCAAGTGGA 57.703 42.857 0.00 0.00 0.00 4.02
443 444 3.837355 AGCAAGTTTCCTTCAAGTGGAT 58.163 40.909 0.00 0.00 33.09 3.41
444 445 3.571401 AGCAAGTTTCCTTCAAGTGGATG 59.429 43.478 0.00 0.00 33.09 3.51
445 446 3.569701 GCAAGTTTCCTTCAAGTGGATGA 59.430 43.478 0.00 0.00 33.09 2.92
446 447 4.557496 GCAAGTTTCCTTCAAGTGGATGAC 60.557 45.833 0.00 0.00 33.09 3.06
447 448 3.756117 AGTTTCCTTCAAGTGGATGACC 58.244 45.455 0.00 0.00 33.09 4.02
448 449 3.395941 AGTTTCCTTCAAGTGGATGACCT 59.604 43.478 0.00 0.00 37.04 3.85
449 450 4.597507 AGTTTCCTTCAAGTGGATGACCTA 59.402 41.667 0.00 0.00 37.04 3.08
450 451 5.073144 AGTTTCCTTCAAGTGGATGACCTAA 59.927 40.000 0.00 0.00 37.04 2.69
451 452 4.826274 TCCTTCAAGTGGATGACCTAAG 57.174 45.455 0.00 0.00 37.04 2.18
452 453 3.519510 TCCTTCAAGTGGATGACCTAAGG 59.480 47.826 0.00 0.00 37.04 2.69
453 454 3.264450 CCTTCAAGTGGATGACCTAAGGT 59.736 47.826 0.00 0.00 39.44 3.50
454 455 4.263506 CCTTCAAGTGGATGACCTAAGGTT 60.264 45.833 0.00 0.00 35.25 3.50
455 456 4.993705 TCAAGTGGATGACCTAAGGTTT 57.006 40.909 0.00 0.00 35.25 3.27
456 457 6.442541 TTCAAGTGGATGACCTAAGGTTTA 57.557 37.500 0.00 0.00 35.25 2.01
457 458 6.636454 TCAAGTGGATGACCTAAGGTTTAT 57.364 37.500 0.00 0.00 35.25 1.40
458 459 6.650120 TCAAGTGGATGACCTAAGGTTTATC 58.350 40.000 0.00 0.00 35.25 1.75
459 460 6.214615 TCAAGTGGATGACCTAAGGTTTATCA 59.785 38.462 0.00 0.00 35.25 2.15
460 461 6.636454 AGTGGATGACCTAAGGTTTATCAA 57.364 37.500 0.00 0.00 35.25 2.57
461 462 7.213178 AGTGGATGACCTAAGGTTTATCAAT 57.787 36.000 0.00 0.00 35.25 2.57
462 463 7.283329 AGTGGATGACCTAAGGTTTATCAATC 58.717 38.462 0.00 0.00 35.25 2.67
463 464 6.486993 GTGGATGACCTAAGGTTTATCAATCC 59.513 42.308 0.00 0.00 35.25 3.01
464 465 5.701290 GGATGACCTAAGGTTTATCAATCCG 59.299 44.000 0.00 0.00 35.25 4.18
465 466 5.687166 TGACCTAAGGTTTATCAATCCGT 57.313 39.130 0.00 0.00 35.25 4.69
466 467 5.424757 TGACCTAAGGTTTATCAATCCGTG 58.575 41.667 0.00 0.00 35.25 4.94
467 468 4.777463 ACCTAAGGTTTATCAATCCGTGG 58.223 43.478 0.00 0.00 27.29 4.94
468 469 4.134563 CCTAAGGTTTATCAATCCGTGGG 58.865 47.826 0.00 0.00 0.00 4.61
469 470 4.141574 CCTAAGGTTTATCAATCCGTGGGA 60.142 45.833 0.00 0.00 34.51 4.37
470 471 3.560636 AGGTTTATCAATCCGTGGGAG 57.439 47.619 0.00 0.00 34.05 4.30
471 472 2.172717 AGGTTTATCAATCCGTGGGAGG 59.827 50.000 0.00 0.00 34.05 4.30
472 473 2.092592 GGTTTATCAATCCGTGGGAGGT 60.093 50.000 0.00 0.00 34.05 3.85
473 474 2.943033 GTTTATCAATCCGTGGGAGGTG 59.057 50.000 0.00 0.00 34.05 4.00
474 475 1.874129 TATCAATCCGTGGGAGGTGT 58.126 50.000 0.00 0.00 34.05 4.16
475 476 1.874129 ATCAATCCGTGGGAGGTGTA 58.126 50.000 0.00 0.00 34.05 2.90
476 477 1.191535 TCAATCCGTGGGAGGTGTAG 58.808 55.000 0.00 0.00 34.05 2.74
477 478 0.178068 CAATCCGTGGGAGGTGTAGG 59.822 60.000 0.00 0.00 34.05 3.18
478 479 0.042131 AATCCGTGGGAGGTGTAGGA 59.958 55.000 0.00 0.00 34.05 2.94
479 480 0.264955 ATCCGTGGGAGGTGTAGGAT 59.735 55.000 0.00 0.00 34.05 3.24
480 481 0.686441 TCCGTGGGAGGTGTAGGATG 60.686 60.000 0.00 0.00 0.00 3.51
481 482 0.686441 CCGTGGGAGGTGTAGGATGA 60.686 60.000 0.00 0.00 0.00 2.92
482 483 1.191535 CGTGGGAGGTGTAGGATGAA 58.808 55.000 0.00 0.00 0.00 2.57
483 484 1.137086 CGTGGGAGGTGTAGGATGAAG 59.863 57.143 0.00 0.00 0.00 3.02
484 485 2.467880 GTGGGAGGTGTAGGATGAAGA 58.532 52.381 0.00 0.00 0.00 2.87
485 486 3.041946 GTGGGAGGTGTAGGATGAAGAT 58.958 50.000 0.00 0.00 0.00 2.40
486 487 3.041211 TGGGAGGTGTAGGATGAAGATG 58.959 50.000 0.00 0.00 0.00 2.90
487 488 2.370189 GGGAGGTGTAGGATGAAGATGG 59.630 54.545 0.00 0.00 0.00 3.51
488 489 3.041946 GGAGGTGTAGGATGAAGATGGT 58.958 50.000 0.00 0.00 0.00 3.55
489 490 3.070302 GGAGGTGTAGGATGAAGATGGTC 59.930 52.174 0.00 0.00 0.00 4.02
490 491 3.964031 GAGGTGTAGGATGAAGATGGTCT 59.036 47.826 0.00 0.00 0.00 3.85
491 492 3.964031 AGGTGTAGGATGAAGATGGTCTC 59.036 47.826 0.00 0.00 0.00 3.36
492 493 3.964031 GGTGTAGGATGAAGATGGTCTCT 59.036 47.826 0.00 0.00 34.96 3.10
493 494 4.038642 GGTGTAGGATGAAGATGGTCTCTC 59.961 50.000 0.00 0.00 31.03 3.20
494 495 4.892934 GTGTAGGATGAAGATGGTCTCTCT 59.107 45.833 0.00 0.00 31.03 3.10
495 496 5.009610 GTGTAGGATGAAGATGGTCTCTCTC 59.990 48.000 0.00 0.00 31.03 3.20
496 497 4.262891 AGGATGAAGATGGTCTCTCTCA 57.737 45.455 0.00 0.00 31.03 3.27
497 498 4.618635 AGGATGAAGATGGTCTCTCTCAA 58.381 43.478 0.00 0.00 31.03 3.02
498 499 4.650588 AGGATGAAGATGGTCTCTCTCAAG 59.349 45.833 0.00 0.00 31.03 3.02
499 500 3.883830 TGAAGATGGTCTCTCTCAAGC 57.116 47.619 0.00 0.00 31.03 4.01
500 501 3.168292 TGAAGATGGTCTCTCTCAAGCA 58.832 45.455 0.00 0.00 31.03 3.91
501 502 3.580022 TGAAGATGGTCTCTCTCAAGCAA 59.420 43.478 0.00 0.00 31.03 3.91
502 503 3.608316 AGATGGTCTCTCTCAAGCAAC 57.392 47.619 0.00 0.00 0.00 4.17
503 504 2.235898 AGATGGTCTCTCTCAAGCAACC 59.764 50.000 0.00 0.00 0.00 3.77
504 505 0.687354 TGGTCTCTCTCAAGCAACCC 59.313 55.000 0.00 0.00 0.00 4.11
505 506 0.980423 GGTCTCTCTCAAGCAACCCT 59.020 55.000 0.00 0.00 0.00 4.34
506 507 1.338579 GGTCTCTCTCAAGCAACCCTG 60.339 57.143 0.00 0.00 0.00 4.45
519 520 3.742433 CAACCCTGCAACCAAATAACA 57.258 42.857 0.00 0.00 0.00 2.41
520 521 4.065321 CAACCCTGCAACCAAATAACAA 57.935 40.909 0.00 0.00 0.00 2.83
521 522 4.446371 CAACCCTGCAACCAAATAACAAA 58.554 39.130 0.00 0.00 0.00 2.83
522 523 4.335400 ACCCTGCAACCAAATAACAAAG 57.665 40.909 0.00 0.00 0.00 2.77
523 524 3.964031 ACCCTGCAACCAAATAACAAAGA 59.036 39.130 0.00 0.00 0.00 2.52
524 525 4.039124 ACCCTGCAACCAAATAACAAAGAG 59.961 41.667 0.00 0.00 0.00 2.85
525 526 4.039124 CCCTGCAACCAAATAACAAAGAGT 59.961 41.667 0.00 0.00 0.00 3.24
526 527 5.222631 CCTGCAACCAAATAACAAAGAGTC 58.777 41.667 0.00 0.00 0.00 3.36
527 528 5.010012 CCTGCAACCAAATAACAAAGAGTCT 59.990 40.000 0.00 0.00 0.00 3.24
528 529 6.072112 TGCAACCAAATAACAAAGAGTCTC 57.928 37.500 0.00 0.00 0.00 3.36
529 530 5.827797 TGCAACCAAATAACAAAGAGTCTCT 59.172 36.000 0.00 0.00 0.00 3.10
530 531 6.017109 TGCAACCAAATAACAAAGAGTCTCTC 60.017 38.462 1.96 0.00 0.00 3.20
531 532 6.205658 GCAACCAAATAACAAAGAGTCTCTCT 59.794 38.462 1.96 0.00 43.37 3.10
540 541 1.931635 AGAGTCTCTCTTGTGTCCCC 58.068 55.000 0.00 0.00 37.60 4.81
541 542 1.148027 AGAGTCTCTCTTGTGTCCCCA 59.852 52.381 0.00 0.00 37.60 4.96
542 543 1.971357 GAGTCTCTCTTGTGTCCCCAA 59.029 52.381 0.00 0.00 0.00 4.12
543 544 1.694696 AGTCTCTCTTGTGTCCCCAAC 59.305 52.381 0.00 0.00 0.00 3.77
544 545 1.416401 GTCTCTCTTGTGTCCCCAACA 59.584 52.381 0.00 0.00 34.78 3.33
551 552 3.428100 TGTCCCCAACACACCCAA 58.572 55.556 0.00 0.00 31.20 4.12
552 553 1.934410 TGTCCCCAACACACCCAAT 59.066 52.632 0.00 0.00 31.20 3.16
553 554 1.149986 TGTCCCCAACACACCCAATA 58.850 50.000 0.00 0.00 31.20 1.90
554 555 1.499438 TGTCCCCAACACACCCAATAA 59.501 47.619 0.00 0.00 31.20 1.40
555 556 2.091278 TGTCCCCAACACACCCAATAAA 60.091 45.455 0.00 0.00 31.20 1.40
556 557 2.966516 GTCCCCAACACACCCAATAAAA 59.033 45.455 0.00 0.00 0.00 1.52
557 558 3.580895 GTCCCCAACACACCCAATAAAAT 59.419 43.478 0.00 0.00 0.00 1.82
558 559 3.580458 TCCCCAACACACCCAATAAAATG 59.420 43.478 0.00 0.00 0.00 2.32
559 560 3.307339 CCCCAACACACCCAATAAAATGG 60.307 47.826 0.00 0.00 40.35 3.16
560 561 3.326297 CCCAACACACCCAATAAAATGGT 59.674 43.478 0.00 0.00 38.91 3.55
561 562 4.528596 CCCAACACACCCAATAAAATGGTA 59.471 41.667 0.00 0.00 38.91 3.25
562 563 5.012148 CCCAACACACCCAATAAAATGGTAA 59.988 40.000 0.00 0.00 38.91 2.85
563 564 6.464465 CCCAACACACCCAATAAAATGGTAAA 60.464 38.462 0.00 0.00 38.91 2.01
564 565 7.164803 CCAACACACCCAATAAAATGGTAAAT 58.835 34.615 0.00 0.00 38.91 1.40
565 566 7.663493 CCAACACACCCAATAAAATGGTAAATT 59.337 33.333 0.00 0.00 38.91 1.82
566 567 9.712305 CAACACACCCAATAAAATGGTAAATTA 57.288 29.630 0.00 0.00 38.91 1.40
749 750 4.697756 CCAGGCGGCAGAAACGGA 62.698 66.667 13.08 0.00 0.00 4.69
774 775 2.157834 TTATTCAGACCGTTGCACGT 57.842 45.000 7.68 0.00 40.58 4.49
811 812 1.871772 CAAAGAGCCGTTGAGCAGG 59.128 57.895 0.00 0.00 34.23 4.85
849 850 1.067776 GCTATATAAGCGGGCGACAGT 60.068 52.381 0.00 0.00 42.53 3.55
1016 1019 2.630158 CTCCATGTCTTCCTCAAGCTG 58.370 52.381 0.00 0.00 0.00 4.24
1121 1124 1.645710 AGGGTTTCTCAGACACCGAT 58.354 50.000 3.82 0.00 33.60 4.18
1143 1146 3.446161 TGAACCAGAATCGTCCGTTCTAT 59.554 43.478 0.00 0.00 35.77 1.98
1215 1218 1.004161 TCGGGATGTTTGAGCAATGGA 59.996 47.619 0.00 0.00 0.00 3.41
1337 1340 4.183686 GCGCATGCTGCCACGAAT 62.184 61.111 17.13 0.00 41.12 3.34
1657 1660 7.556275 ACAAAAAGAGAAGAAGTGACCAACATA 59.444 33.333 0.00 0.00 0.00 2.29
2211 2221 2.489437 GGGTTTGTGGTGTTTAGGGCTA 60.489 50.000 0.00 0.00 0.00 3.93
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 2.315925 TCATTGCTTAAGAGGCGGAG 57.684 50.000 6.67 0.00 0.00 4.63
5 6 3.009723 TCTTTCATTGCTTAAGAGGCGG 58.990 45.455 6.67 0.00 0.00 6.13
6 7 4.393062 TCTTCTTTCATTGCTTAAGAGGCG 59.607 41.667 6.67 0.00 30.32 5.52
7 8 5.182001 TGTCTTCTTTCATTGCTTAAGAGGC 59.818 40.000 6.67 0.00 30.32 4.70
8 9 6.622462 GCTGTCTTCTTTCATTGCTTAAGAGG 60.622 42.308 6.67 0.00 30.32 3.69
9 10 6.313252 GCTGTCTTCTTTCATTGCTTAAGAG 58.687 40.000 6.67 0.00 30.32 2.85
10 11 5.182001 GGCTGTCTTCTTTCATTGCTTAAGA 59.818 40.000 6.67 0.00 0.00 2.10
11 12 5.397326 GGCTGTCTTCTTTCATTGCTTAAG 58.603 41.667 0.00 0.00 0.00 1.85
12 13 4.083324 CGGCTGTCTTCTTTCATTGCTTAA 60.083 41.667 0.00 0.00 0.00 1.85
13 14 3.436704 CGGCTGTCTTCTTTCATTGCTTA 59.563 43.478 0.00 0.00 0.00 3.09
14 15 2.227388 CGGCTGTCTTCTTTCATTGCTT 59.773 45.455 0.00 0.00 0.00 3.91
15 16 1.808945 CGGCTGTCTTCTTTCATTGCT 59.191 47.619 0.00 0.00 0.00 3.91
16 17 1.730446 GCGGCTGTCTTCTTTCATTGC 60.730 52.381 0.00 0.00 0.00 3.56
17 18 1.536766 TGCGGCTGTCTTCTTTCATTG 59.463 47.619 0.00 0.00 0.00 2.82
18 19 1.808945 CTGCGGCTGTCTTCTTTCATT 59.191 47.619 0.00 0.00 0.00 2.57
19 20 1.446907 CTGCGGCTGTCTTCTTTCAT 58.553 50.000 0.00 0.00 0.00 2.57
20 21 1.230635 GCTGCGGCTGTCTTCTTTCA 61.231 55.000 11.21 0.00 35.22 2.69
21 22 1.499502 GCTGCGGCTGTCTTCTTTC 59.500 57.895 11.21 0.00 35.22 2.62
22 23 1.968540 GGCTGCGGCTGTCTTCTTT 60.969 57.895 18.85 0.00 38.73 2.52
23 24 2.359230 GGCTGCGGCTGTCTTCTT 60.359 61.111 18.85 0.00 38.73 2.52
24 25 4.749310 CGGCTGCGGCTGTCTTCT 62.749 66.667 18.77 0.00 39.80 2.85
41 42 1.878656 ATACCGCTAGATGCCGGAGC 61.879 60.000 5.05 3.19 38.24 4.70
42 43 1.402259 CTATACCGCTAGATGCCGGAG 59.598 57.143 5.05 0.00 38.24 4.63
43 44 1.460504 CTATACCGCTAGATGCCGGA 58.539 55.000 5.05 0.00 38.24 5.14
44 45 0.179134 GCTATACCGCTAGATGCCGG 60.179 60.000 0.00 0.00 39.83 6.13
45 46 0.811915 AGCTATACCGCTAGATGCCG 59.188 55.000 0.00 0.00 38.76 5.69
52 53 2.239150 CCCTCCTCTAGCTATACCGCTA 59.761 54.545 0.00 0.00 41.30 4.26
53 54 1.004979 CCCTCCTCTAGCTATACCGCT 59.995 57.143 0.00 0.00 43.83 5.52
54 55 1.004511 TCCCTCCTCTAGCTATACCGC 59.995 57.143 0.00 0.00 0.00 5.68
55 56 2.356330 CCTCCCTCCTCTAGCTATACCG 60.356 59.091 0.00 0.00 0.00 4.02
56 57 2.622190 GCCTCCCTCCTCTAGCTATACC 60.622 59.091 0.00 0.00 0.00 2.73
57 58 2.041891 TGCCTCCCTCCTCTAGCTATAC 59.958 54.545 0.00 0.00 0.00 1.47
58 59 2.359243 TGCCTCCCTCCTCTAGCTATA 58.641 52.381 0.00 0.00 0.00 1.31
59 60 1.162505 TGCCTCCCTCCTCTAGCTAT 58.837 55.000 0.00 0.00 0.00 2.97
60 61 0.934446 TTGCCTCCCTCCTCTAGCTA 59.066 55.000 0.00 0.00 0.00 3.32
61 62 0.267356 ATTGCCTCCCTCCTCTAGCT 59.733 55.000 0.00 0.00 0.00 3.32
62 63 1.621317 GTATTGCCTCCCTCCTCTAGC 59.379 57.143 0.00 0.00 0.00 3.42
63 64 2.896685 CTGTATTGCCTCCCTCCTCTAG 59.103 54.545 0.00 0.00 0.00 2.43
64 65 2.518407 TCTGTATTGCCTCCCTCCTCTA 59.482 50.000 0.00 0.00 0.00 2.43
65 66 1.292242 TCTGTATTGCCTCCCTCCTCT 59.708 52.381 0.00 0.00 0.00 3.69
66 67 1.794714 TCTGTATTGCCTCCCTCCTC 58.205 55.000 0.00 0.00 0.00 3.71
67 68 2.503869 ATCTGTATTGCCTCCCTCCT 57.496 50.000 0.00 0.00 0.00 3.69
68 69 2.028930 CGTATCTGTATTGCCTCCCTCC 60.029 54.545 0.00 0.00 0.00 4.30
69 70 2.028930 CCGTATCTGTATTGCCTCCCTC 60.029 54.545 0.00 0.00 0.00 4.30
70 71 1.971357 CCGTATCTGTATTGCCTCCCT 59.029 52.381 0.00 0.00 0.00 4.20
71 72 1.692519 ACCGTATCTGTATTGCCTCCC 59.307 52.381 0.00 0.00 0.00 4.30
72 73 2.288886 GGACCGTATCTGTATTGCCTCC 60.289 54.545 0.00 0.00 0.00 4.30
73 74 2.364324 TGGACCGTATCTGTATTGCCTC 59.636 50.000 0.00 0.00 0.00 4.70
74 75 2.394632 TGGACCGTATCTGTATTGCCT 58.605 47.619 0.00 0.00 0.00 4.75
75 76 2.902705 TGGACCGTATCTGTATTGCC 57.097 50.000 0.00 0.00 0.00 4.52
76 77 2.987149 CGATGGACCGTATCTGTATTGC 59.013 50.000 0.00 0.00 0.00 3.56
77 78 4.023107 AGACGATGGACCGTATCTGTATTG 60.023 45.833 0.00 0.00 43.49 1.90
78 79 4.142790 AGACGATGGACCGTATCTGTATT 58.857 43.478 0.00 0.00 43.49 1.89
79 80 3.752665 AGACGATGGACCGTATCTGTAT 58.247 45.455 0.00 0.00 43.49 2.29
80 81 3.204306 AGACGATGGACCGTATCTGTA 57.796 47.619 0.00 0.00 43.49 2.74
81 82 2.054232 AGACGATGGACCGTATCTGT 57.946 50.000 0.00 0.00 43.49 3.41
82 83 3.751698 TGATAGACGATGGACCGTATCTG 59.248 47.826 9.37 0.00 43.49 2.90
83 84 4.017177 TGATAGACGATGGACCGTATCT 57.983 45.455 5.50 5.50 43.49 1.98
84 85 4.761235 TTGATAGACGATGGACCGTATC 57.239 45.455 0.00 0.00 43.49 2.24
85 86 4.158025 GGATTGATAGACGATGGACCGTAT 59.842 45.833 0.00 0.00 43.49 3.06
86 87 3.504906 GGATTGATAGACGATGGACCGTA 59.495 47.826 0.00 0.00 43.49 4.02
87 88 2.296471 GGATTGATAGACGATGGACCGT 59.704 50.000 0.00 0.00 46.43 4.83
88 89 2.558795 AGGATTGATAGACGATGGACCG 59.441 50.000 0.00 0.00 0.00 4.79
89 90 3.829601 AGAGGATTGATAGACGATGGACC 59.170 47.826 0.00 0.00 0.00 4.46
90 91 5.941058 TCTAGAGGATTGATAGACGATGGAC 59.059 44.000 0.00 0.00 0.00 4.02
91 92 6.013293 TCTCTAGAGGATTGATAGACGATGGA 60.013 42.308 19.67 0.00 0.00 3.41
92 93 6.176896 TCTCTAGAGGATTGATAGACGATGG 58.823 44.000 19.67 0.00 0.00 3.51
93 94 7.390440 ACTTCTCTAGAGGATTGATAGACGATG 59.610 40.741 19.67 0.00 0.00 3.84
94 95 7.458397 ACTTCTCTAGAGGATTGATAGACGAT 58.542 38.462 19.67 0.00 0.00 3.73
95 96 6.833041 ACTTCTCTAGAGGATTGATAGACGA 58.167 40.000 19.67 0.00 0.00 4.20
96 97 7.504924 AACTTCTCTAGAGGATTGATAGACG 57.495 40.000 19.67 0.00 0.00 4.18
97 98 8.789762 GGTAACTTCTCTAGAGGATTGATAGAC 58.210 40.741 19.67 6.67 0.00 2.59
98 99 7.662258 CGGTAACTTCTCTAGAGGATTGATAGA 59.338 40.741 19.67 0.00 0.00 1.98
99 100 7.446013 ACGGTAACTTCTCTAGAGGATTGATAG 59.554 40.741 19.67 8.77 0.00 2.08
100 101 7.288560 ACGGTAACTTCTCTAGAGGATTGATA 58.711 38.462 19.67 3.82 0.00 2.15
101 102 6.130569 ACGGTAACTTCTCTAGAGGATTGAT 58.869 40.000 19.67 4.72 0.00 2.57
102 103 5.507637 ACGGTAACTTCTCTAGAGGATTGA 58.492 41.667 19.67 0.00 0.00 2.57
103 104 5.838531 ACGGTAACTTCTCTAGAGGATTG 57.161 43.478 19.67 9.66 0.00 2.67
104 105 5.526846 CGTACGGTAACTTCTCTAGAGGATT 59.473 44.000 19.67 13.15 0.00 3.01
105 106 5.055812 CGTACGGTAACTTCTCTAGAGGAT 58.944 45.833 19.67 0.00 0.00 3.24
106 107 4.160439 TCGTACGGTAACTTCTCTAGAGGA 59.840 45.833 19.67 10.50 0.00 3.71
107 108 4.437239 TCGTACGGTAACTTCTCTAGAGG 58.563 47.826 19.67 7.17 0.00 3.69
108 109 5.347342 TCTCGTACGGTAACTTCTCTAGAG 58.653 45.833 16.52 13.98 0.00 2.43
109 110 5.330455 TCTCGTACGGTAACTTCTCTAGA 57.670 43.478 16.52 3.07 0.00 2.43
110 111 4.507388 CCTCTCGTACGGTAACTTCTCTAG 59.493 50.000 16.52 0.44 0.00 2.43
111 112 4.160439 TCCTCTCGTACGGTAACTTCTCTA 59.840 45.833 16.52 0.00 0.00 2.43
112 113 3.055530 TCCTCTCGTACGGTAACTTCTCT 60.056 47.826 16.52 0.00 0.00 3.10
113 114 3.265791 TCCTCTCGTACGGTAACTTCTC 58.734 50.000 16.52 0.00 0.00 2.87
114 115 3.269178 CTCCTCTCGTACGGTAACTTCT 58.731 50.000 16.52 0.00 0.00 2.85
115 116 2.223226 GCTCCTCTCGTACGGTAACTTC 60.223 54.545 16.52 0.00 0.00 3.01
116 117 1.742268 GCTCCTCTCGTACGGTAACTT 59.258 52.381 16.52 0.00 0.00 2.66
117 118 1.377536 GCTCCTCTCGTACGGTAACT 58.622 55.000 16.52 0.00 0.00 2.24
118 119 0.027324 CGCTCCTCTCGTACGGTAAC 59.973 60.000 16.52 0.00 0.00 2.50
119 120 0.108186 TCGCTCCTCTCGTACGGTAA 60.108 55.000 16.52 0.07 0.00 2.85
120 121 0.529337 CTCGCTCCTCTCGTACGGTA 60.529 60.000 16.52 2.73 0.00 4.02
121 122 1.814586 CTCGCTCCTCTCGTACGGT 60.815 63.158 16.52 0.00 0.00 4.83
122 123 2.535788 CCTCGCTCCTCTCGTACGG 61.536 68.421 16.52 6.42 0.00 4.02
123 124 1.492319 CTCCTCGCTCCTCTCGTACG 61.492 65.000 9.53 9.53 0.00 3.67
124 125 1.161563 CCTCCTCGCTCCTCTCGTAC 61.162 65.000 0.00 0.00 0.00 3.67
125 126 1.146485 CCTCCTCGCTCCTCTCGTA 59.854 63.158 0.00 0.00 0.00 3.43
126 127 2.124487 CCTCCTCGCTCCTCTCGT 60.124 66.667 0.00 0.00 0.00 4.18
127 128 1.032657 TTTCCTCCTCGCTCCTCTCG 61.033 60.000 0.00 0.00 0.00 4.04
128 129 1.134936 GTTTTCCTCCTCGCTCCTCTC 60.135 57.143 0.00 0.00 0.00 3.20
129 130 0.899019 GTTTTCCTCCTCGCTCCTCT 59.101 55.000 0.00 0.00 0.00 3.69
130 131 0.608640 TGTTTTCCTCCTCGCTCCTC 59.391 55.000 0.00 0.00 0.00 3.71
131 132 1.056660 TTGTTTTCCTCCTCGCTCCT 58.943 50.000 0.00 0.00 0.00 3.69
132 133 1.892209 TTTGTTTTCCTCCTCGCTCC 58.108 50.000 0.00 0.00 0.00 4.70
133 134 3.564225 TCTTTTTGTTTTCCTCCTCGCTC 59.436 43.478 0.00 0.00 0.00 5.03
134 135 3.551846 TCTTTTTGTTTTCCTCCTCGCT 58.448 40.909 0.00 0.00 0.00 4.93
135 136 3.982576 TCTTTTTGTTTTCCTCCTCGC 57.017 42.857 0.00 0.00 0.00 5.03
136 137 5.239525 ACAGATCTTTTTGTTTTCCTCCTCG 59.760 40.000 0.00 0.00 0.00 4.63
137 138 6.263168 TCACAGATCTTTTTGTTTTCCTCCTC 59.737 38.462 0.00 0.00 0.00 3.71
138 139 6.129179 TCACAGATCTTTTTGTTTTCCTCCT 58.871 36.000 0.00 0.00 0.00 3.69
139 140 6.391227 TCACAGATCTTTTTGTTTTCCTCC 57.609 37.500 0.00 0.00 0.00 4.30
140 141 6.920210 CCTTCACAGATCTTTTTGTTTTCCTC 59.080 38.462 0.00 0.00 0.00 3.71
141 142 6.683861 GCCTTCACAGATCTTTTTGTTTTCCT 60.684 38.462 0.00 0.00 0.00 3.36
142 143 5.463392 GCCTTCACAGATCTTTTTGTTTTCC 59.537 40.000 0.00 0.00 0.00 3.13
143 144 5.463392 GGCCTTCACAGATCTTTTTGTTTTC 59.537 40.000 0.00 0.00 0.00 2.29
144 145 5.104982 TGGCCTTCACAGATCTTTTTGTTTT 60.105 36.000 3.32 0.00 0.00 2.43
145 146 4.405358 TGGCCTTCACAGATCTTTTTGTTT 59.595 37.500 3.32 0.00 0.00 2.83
146 147 3.960102 TGGCCTTCACAGATCTTTTTGTT 59.040 39.130 3.32 0.00 0.00 2.83
147 148 3.565307 TGGCCTTCACAGATCTTTTTGT 58.435 40.909 3.32 0.00 0.00 2.83
148 149 4.038402 ACTTGGCCTTCACAGATCTTTTTG 59.962 41.667 3.32 0.00 0.00 2.44
149 150 4.038402 CACTTGGCCTTCACAGATCTTTTT 59.962 41.667 3.32 0.00 0.00 1.94
150 151 3.571401 CACTTGGCCTTCACAGATCTTTT 59.429 43.478 3.32 0.00 0.00 2.27
151 152 3.152341 CACTTGGCCTTCACAGATCTTT 58.848 45.455 3.32 0.00 0.00 2.52
152 153 2.373169 TCACTTGGCCTTCACAGATCTT 59.627 45.455 3.32 0.00 0.00 2.40
153 154 1.980765 TCACTTGGCCTTCACAGATCT 59.019 47.619 3.32 0.00 0.00 2.75
154 155 2.479566 TCACTTGGCCTTCACAGATC 57.520 50.000 3.32 0.00 0.00 2.75
155 156 2.957402 TTCACTTGGCCTTCACAGAT 57.043 45.000 3.32 0.00 0.00 2.90
156 157 2.106338 TCATTCACTTGGCCTTCACAGA 59.894 45.455 3.32 0.00 0.00 3.41
157 158 2.227388 GTCATTCACTTGGCCTTCACAG 59.773 50.000 3.32 0.00 0.00 3.66
158 159 2.158623 AGTCATTCACTTGGCCTTCACA 60.159 45.455 3.32 0.00 26.56 3.58
159 160 2.508526 AGTCATTCACTTGGCCTTCAC 58.491 47.619 3.32 0.00 26.56 3.18
160 161 2.957402 AGTCATTCACTTGGCCTTCA 57.043 45.000 3.32 0.00 26.56 3.02
161 162 3.416156 AGAAGTCATTCACTTGGCCTTC 58.584 45.455 3.32 0.00 46.10 3.46
162 163 3.515602 AGAAGTCATTCACTTGGCCTT 57.484 42.857 3.32 0.00 46.10 4.35
163 164 3.515602 AAGAAGTCATTCACTTGGCCT 57.484 42.857 3.32 0.00 46.10 5.19
164 165 3.569701 TCAAAGAAGTCATTCACTTGGCC 59.430 43.478 0.00 0.00 46.10 5.36
165 166 4.836125 TCAAAGAAGTCATTCACTTGGC 57.164 40.909 0.00 0.00 46.10 4.52
166 167 6.082338 CGATTCAAAGAAGTCATTCACTTGG 58.918 40.000 0.00 0.00 46.10 3.61
167 168 6.082338 CCGATTCAAAGAAGTCATTCACTTG 58.918 40.000 0.00 0.00 46.10 3.16
169 170 5.180117 CACCGATTCAAAGAAGTCATTCACT 59.820 40.000 0.00 0.00 37.94 3.41
170 171 5.179368 TCACCGATTCAAAGAAGTCATTCAC 59.821 40.000 0.00 0.00 37.94 3.18
171 172 5.304778 TCACCGATTCAAAGAAGTCATTCA 58.695 37.500 0.00 0.00 37.94 2.57
172 173 5.862924 TCACCGATTCAAAGAAGTCATTC 57.137 39.130 0.00 0.00 35.52 2.67
173 174 6.633500 TTTCACCGATTCAAAGAAGTCATT 57.367 33.333 0.00 0.00 0.00 2.57
174 175 5.335191 GCTTTCACCGATTCAAAGAAGTCAT 60.335 40.000 0.00 0.00 29.96 3.06
175 176 4.024048 GCTTTCACCGATTCAAAGAAGTCA 60.024 41.667 0.00 0.00 29.96 3.41
176 177 4.214332 AGCTTTCACCGATTCAAAGAAGTC 59.786 41.667 0.00 0.00 29.96 3.01
177 178 4.137543 AGCTTTCACCGATTCAAAGAAGT 58.862 39.130 0.00 0.00 29.96 3.01
178 179 4.756084 AGCTTTCACCGATTCAAAGAAG 57.244 40.909 0.00 0.00 29.96 2.85
179 180 6.627395 TTTAGCTTTCACCGATTCAAAGAA 57.373 33.333 0.00 0.00 29.96 2.52
180 181 6.627395 TTTTAGCTTTCACCGATTCAAAGA 57.373 33.333 0.00 0.00 29.96 2.52
213 214 1.535833 GATCTATCTTCTCCGCCGGA 58.464 55.000 5.05 5.37 0.00 5.14
214 215 0.528470 GGATCTATCTTCTCCGCCGG 59.472 60.000 0.00 0.00 0.00 6.13
215 216 0.169230 CGGATCTATCTTCTCCGCCG 59.831 60.000 0.00 0.00 44.65 6.46
219 220 5.167845 GCTTTCATCGGATCTATCTTCTCC 58.832 45.833 0.00 0.00 0.00 3.71
220 221 5.777802 TGCTTTCATCGGATCTATCTTCTC 58.222 41.667 0.00 0.00 0.00 2.87
221 222 5.798125 TGCTTTCATCGGATCTATCTTCT 57.202 39.130 0.00 0.00 0.00 2.85
222 223 6.565623 GCTTTGCTTTCATCGGATCTATCTTC 60.566 42.308 0.00 0.00 0.00 2.87
223 224 5.238214 GCTTTGCTTTCATCGGATCTATCTT 59.762 40.000 0.00 0.00 0.00 2.40
224 225 4.754114 GCTTTGCTTTCATCGGATCTATCT 59.246 41.667 0.00 0.00 0.00 1.98
225 226 4.376819 CGCTTTGCTTTCATCGGATCTATC 60.377 45.833 0.00 0.00 0.00 2.08
226 227 3.496130 CGCTTTGCTTTCATCGGATCTAT 59.504 43.478 0.00 0.00 0.00 1.98
227 228 2.866156 CGCTTTGCTTTCATCGGATCTA 59.134 45.455 0.00 0.00 0.00 1.98
228 229 1.667724 CGCTTTGCTTTCATCGGATCT 59.332 47.619 0.00 0.00 0.00 2.75
229 230 1.857602 GCGCTTTGCTTTCATCGGATC 60.858 52.381 0.00 0.00 41.73 3.36
230 231 0.099436 GCGCTTTGCTTTCATCGGAT 59.901 50.000 0.00 0.00 41.73 4.18
231 232 1.233950 TGCGCTTTGCTTTCATCGGA 61.234 50.000 9.73 0.00 46.63 4.55
232 233 1.067199 GTGCGCTTTGCTTTCATCGG 61.067 55.000 9.73 0.00 46.63 4.18
233 234 0.110056 AGTGCGCTTTGCTTTCATCG 60.110 50.000 9.73 0.00 46.63 3.84
234 235 2.056094 AAGTGCGCTTTGCTTTCATC 57.944 45.000 9.73 0.00 46.63 2.92
235 236 2.514205 AAAGTGCGCTTTGCTTTCAT 57.486 40.000 23.84 0.00 46.63 2.57
243 244 1.290009 GGCATCCAAAGTGCGCTTT 59.710 52.632 19.36 19.36 45.04 3.51
244 245 2.964978 GGCATCCAAAGTGCGCTT 59.035 55.556 9.73 6.71 43.40 4.68
247 248 2.879907 CAGGGCATCCAAAGTGCG 59.120 61.111 0.00 0.00 43.40 5.34
248 249 2.221906 CTGCAGGGCATCCAAAGTGC 62.222 60.000 5.57 0.00 38.13 4.40
249 250 1.888018 CTGCAGGGCATCCAAAGTG 59.112 57.895 5.57 0.00 38.13 3.16
250 251 1.980772 GCTGCAGGGCATCCAAAGT 60.981 57.895 17.12 0.00 38.13 2.66
251 252 2.890371 GCTGCAGGGCATCCAAAG 59.110 61.111 17.12 0.00 38.13 2.77
252 253 3.063704 CGCTGCAGGGCATCCAAA 61.064 61.111 18.62 0.00 38.13 3.28
253 254 4.032452 TCGCTGCAGGGCATCCAA 62.032 61.111 25.01 4.67 38.13 3.53
254 255 4.783621 GTCGCTGCAGGGCATCCA 62.784 66.667 25.01 5.43 38.13 3.41
256 257 4.783621 TGGTCGCTGCAGGGCATC 62.784 66.667 25.01 16.48 38.13 3.91
257 258 4.119363 ATGGTCGCTGCAGGGCAT 62.119 61.111 25.01 19.50 38.13 4.40
258 259 4.783621 GATGGTCGCTGCAGGGCA 62.784 66.667 25.01 18.16 36.92 5.36
259 260 4.783621 TGATGGTCGCTGCAGGGC 62.784 66.667 25.01 18.85 0.00 5.19
260 261 2.821366 GTGATGGTCGCTGCAGGG 60.821 66.667 23.98 23.98 0.00 4.45
261 262 2.821366 GGTGATGGTCGCTGCAGG 60.821 66.667 17.12 5.82 0.00 4.85
262 263 3.190849 CGGTGATGGTCGCTGCAG 61.191 66.667 10.11 10.11 0.00 4.41
281 282 0.320771 ATAGATGGATTGCGGCGGAC 60.321 55.000 9.78 0.00 0.00 4.79
282 283 0.320683 CATAGATGGATTGCGGCGGA 60.321 55.000 9.78 1.34 0.00 5.54
283 284 0.320683 TCATAGATGGATTGCGGCGG 60.321 55.000 9.78 0.00 0.00 6.13
284 285 0.792640 GTCATAGATGGATTGCGGCG 59.207 55.000 0.51 0.51 0.00 6.46
285 286 1.160137 GGTCATAGATGGATTGCGGC 58.840 55.000 0.00 0.00 0.00 6.53
286 287 1.432514 CGGTCATAGATGGATTGCGG 58.567 55.000 0.00 0.00 0.00 5.69
287 288 0.792640 GCGGTCATAGATGGATTGCG 59.207 55.000 0.00 0.00 0.00 4.85
288 289 1.882912 TGCGGTCATAGATGGATTGC 58.117 50.000 0.00 0.00 0.00 3.56
289 290 3.667360 TGATGCGGTCATAGATGGATTG 58.333 45.455 0.00 0.00 31.96 2.67
290 291 4.564782 ATGATGCGGTCATAGATGGATT 57.435 40.909 2.84 0.00 45.67 3.01
291 292 4.019950 TCAATGATGCGGTCATAGATGGAT 60.020 41.667 5.00 0.00 46.80 3.41
292 293 3.324556 TCAATGATGCGGTCATAGATGGA 59.675 43.478 5.00 0.00 46.80 3.41
293 294 3.667360 TCAATGATGCGGTCATAGATGG 58.333 45.455 5.00 0.00 46.80 3.51
294 295 5.334646 CCTTTCAATGATGCGGTCATAGATG 60.335 44.000 5.00 1.51 46.80 2.90
295 296 4.758674 CCTTTCAATGATGCGGTCATAGAT 59.241 41.667 5.00 0.00 46.80 1.98
296 297 4.129380 CCTTTCAATGATGCGGTCATAGA 58.871 43.478 5.00 0.00 46.80 1.98
297 298 3.251729 CCCTTTCAATGATGCGGTCATAG 59.748 47.826 5.00 0.18 46.80 2.23
298 299 3.213506 CCCTTTCAATGATGCGGTCATA 58.786 45.455 5.00 0.00 46.80 2.15
300 301 1.462616 CCCTTTCAATGATGCGGTCA 58.537 50.000 0.00 0.00 42.06 4.02
301 302 0.101219 GCCCTTTCAATGATGCGGTC 59.899 55.000 0.00 0.00 0.00 4.79
302 303 0.611618 TGCCCTTTCAATGATGCGGT 60.612 50.000 0.00 0.00 0.00 5.68
303 304 0.748450 ATGCCCTTTCAATGATGCGG 59.252 50.000 0.00 0.00 0.00 5.69
304 305 3.928727 ATATGCCCTTTCAATGATGCG 57.071 42.857 0.00 0.00 0.00 4.73
305 306 5.477984 TCCTTATATGCCCTTTCAATGATGC 59.522 40.000 0.00 0.00 0.00 3.91
306 307 7.528996 TTCCTTATATGCCCTTTCAATGATG 57.471 36.000 0.00 0.00 0.00 3.07
307 308 6.210185 GCTTCCTTATATGCCCTTTCAATGAT 59.790 38.462 0.00 0.00 0.00 2.45
308 309 5.536161 GCTTCCTTATATGCCCTTTCAATGA 59.464 40.000 0.00 0.00 0.00 2.57
309 310 5.302568 TGCTTCCTTATATGCCCTTTCAATG 59.697 40.000 0.00 0.00 0.00 2.82
310 311 5.457686 TGCTTCCTTATATGCCCTTTCAAT 58.542 37.500 0.00 0.00 0.00 2.57
311 312 4.865905 TGCTTCCTTATATGCCCTTTCAA 58.134 39.130 0.00 0.00 0.00 2.69
312 313 4.165950 TCTGCTTCCTTATATGCCCTTTCA 59.834 41.667 0.00 0.00 0.00 2.69
313 314 4.718961 TCTGCTTCCTTATATGCCCTTTC 58.281 43.478 0.00 0.00 0.00 2.62
314 315 4.723309 CTCTGCTTCCTTATATGCCCTTT 58.277 43.478 0.00 0.00 0.00 3.11
315 316 3.497584 GCTCTGCTTCCTTATATGCCCTT 60.498 47.826 0.00 0.00 0.00 3.95
316 317 2.039613 GCTCTGCTTCCTTATATGCCCT 59.960 50.000 0.00 0.00 0.00 5.19
317 318 2.431454 GCTCTGCTTCCTTATATGCCC 58.569 52.381 0.00 0.00 0.00 5.36
318 319 2.072298 CGCTCTGCTTCCTTATATGCC 58.928 52.381 0.00 0.00 0.00 4.40
319 320 2.072298 CCGCTCTGCTTCCTTATATGC 58.928 52.381 0.00 0.00 0.00 3.14
320 321 3.321497 GACCGCTCTGCTTCCTTATATG 58.679 50.000 0.00 0.00 0.00 1.78
321 322 2.029828 CGACCGCTCTGCTTCCTTATAT 60.030 50.000 0.00 0.00 0.00 0.86
322 323 1.337071 CGACCGCTCTGCTTCCTTATA 59.663 52.381 0.00 0.00 0.00 0.98
323 324 0.103208 CGACCGCTCTGCTTCCTTAT 59.897 55.000 0.00 0.00 0.00 1.73
324 325 1.511305 CGACCGCTCTGCTTCCTTA 59.489 57.895 0.00 0.00 0.00 2.69
325 326 2.262915 CGACCGCTCTGCTTCCTT 59.737 61.111 0.00 0.00 0.00 3.36
326 327 3.764466 CCGACCGCTCTGCTTCCT 61.764 66.667 0.00 0.00 0.00 3.36
327 328 4.821589 CCCGACCGCTCTGCTTCC 62.822 72.222 0.00 0.00 0.00 3.46
328 329 3.296709 TTCCCGACCGCTCTGCTTC 62.297 63.158 0.00 0.00 0.00 3.86
329 330 3.302347 CTTCCCGACCGCTCTGCTT 62.302 63.158 0.00 0.00 0.00 3.91
330 331 3.764466 CTTCCCGACCGCTCTGCT 61.764 66.667 0.00 0.00 0.00 4.24
331 332 2.707849 TACTTCCCGACCGCTCTGC 61.708 63.158 0.00 0.00 0.00 4.26
332 333 1.139095 GTACTTCCCGACCGCTCTG 59.861 63.158 0.00 0.00 0.00 3.35
333 334 1.001145 AGTACTTCCCGACCGCTCT 60.001 57.895 0.00 0.00 0.00 4.09
334 335 1.139095 CAGTACTTCCCGACCGCTC 59.861 63.158 0.00 0.00 0.00 5.03
335 336 0.683504 ATCAGTACTTCCCGACCGCT 60.684 55.000 0.00 0.00 0.00 5.52
336 337 0.527817 CATCAGTACTTCCCGACCGC 60.528 60.000 0.00 0.00 0.00 5.68
337 338 0.815734 ACATCAGTACTTCCCGACCG 59.184 55.000 0.00 0.00 0.00 4.79
338 339 2.100989 AGACATCAGTACTTCCCGACC 58.899 52.381 0.00 0.00 0.00 4.79
339 340 3.946558 AGTAGACATCAGTACTTCCCGAC 59.053 47.826 0.00 0.00 0.00 4.79
340 341 4.232188 AGTAGACATCAGTACTTCCCGA 57.768 45.455 0.00 0.00 0.00 5.14
341 342 4.880120 TGTAGTAGACATCAGTACTTCCCG 59.120 45.833 0.00 0.00 31.20 5.14
342 343 5.651139 TGTGTAGTAGACATCAGTACTTCCC 59.349 44.000 0.00 0.00 41.14 3.97
343 344 6.754702 TGTGTAGTAGACATCAGTACTTCC 57.245 41.667 0.00 0.00 41.14 3.46
344 345 7.028361 GGTTGTGTAGTAGACATCAGTACTTC 58.972 42.308 0.29 0.00 41.14 3.01
345 346 6.720288 AGGTTGTGTAGTAGACATCAGTACTT 59.280 38.462 0.29 0.00 41.14 2.24
346 347 6.246919 AGGTTGTGTAGTAGACATCAGTACT 58.753 40.000 0.29 0.00 41.14 2.73
347 348 6.512342 AGGTTGTGTAGTAGACATCAGTAC 57.488 41.667 0.29 0.00 41.14 2.73
348 349 6.946583 AGAAGGTTGTGTAGTAGACATCAGTA 59.053 38.462 0.29 0.00 41.14 2.74
349 350 5.775701 AGAAGGTTGTGTAGTAGACATCAGT 59.224 40.000 0.29 0.00 41.14 3.41
350 351 6.274157 AGAAGGTTGTGTAGTAGACATCAG 57.726 41.667 0.29 0.00 41.14 2.90
351 352 6.493802 AGAAGAAGGTTGTGTAGTAGACATCA 59.506 38.462 0.29 0.00 41.14 3.07
352 353 6.926313 AGAAGAAGGTTGTGTAGTAGACATC 58.074 40.000 0.29 0.61 41.14 3.06
353 354 6.919775 AGAAGAAGGTTGTGTAGTAGACAT 57.080 37.500 0.29 0.00 41.14 3.06
354 355 6.097839 ACAAGAAGAAGGTTGTGTAGTAGACA 59.902 38.462 0.00 0.00 35.55 3.41
355 356 6.514063 ACAAGAAGAAGGTTGTGTAGTAGAC 58.486 40.000 0.00 0.00 35.55 2.59
356 357 6.726490 ACAAGAAGAAGGTTGTGTAGTAGA 57.274 37.500 0.00 0.00 35.55 2.59
357 358 7.883217 TCTACAAGAAGAAGGTTGTGTAGTAG 58.117 38.462 8.12 0.00 39.49 2.57
358 359 7.828508 TCTACAAGAAGAAGGTTGTGTAGTA 57.171 36.000 8.12 0.00 39.49 1.82
359 360 6.726490 TCTACAAGAAGAAGGTTGTGTAGT 57.274 37.500 8.12 0.00 39.49 2.73
360 361 7.155328 ACATCTACAAGAAGAAGGTTGTGTAG 58.845 38.462 0.00 0.00 39.72 2.74
361 362 7.062749 ACATCTACAAGAAGAAGGTTGTGTA 57.937 36.000 0.00 0.00 37.46 2.90
362 363 5.930135 ACATCTACAAGAAGAAGGTTGTGT 58.070 37.500 0.00 0.00 37.46 3.72
363 364 6.260936 ACAACATCTACAAGAAGAAGGTTGTG 59.739 38.462 18.48 4.23 45.86 3.33
364 365 6.357367 ACAACATCTACAAGAAGAAGGTTGT 58.643 36.000 15.66 15.66 44.51 3.32
365 366 6.867662 ACAACATCTACAAGAAGAAGGTTG 57.132 37.500 14.80 14.80 43.41 3.77
366 367 6.263168 CCAACAACATCTACAAGAAGAAGGTT 59.737 38.462 0.00 0.00 31.23 3.50
367 368 5.765182 CCAACAACATCTACAAGAAGAAGGT 59.235 40.000 0.00 0.00 0.00 3.50
368 369 5.182001 CCCAACAACATCTACAAGAAGAAGG 59.818 44.000 0.00 0.00 0.00 3.46
369 370 5.335191 GCCCAACAACATCTACAAGAAGAAG 60.335 44.000 0.00 0.00 0.00 2.85
370 371 4.518970 GCCCAACAACATCTACAAGAAGAA 59.481 41.667 0.00 0.00 0.00 2.52
371 372 4.072131 GCCCAACAACATCTACAAGAAGA 58.928 43.478 0.00 0.00 0.00 2.87
372 373 3.191371 GGCCCAACAACATCTACAAGAAG 59.809 47.826 0.00 0.00 0.00 2.85
373 374 3.153919 GGCCCAACAACATCTACAAGAA 58.846 45.455 0.00 0.00 0.00 2.52
374 375 2.375174 AGGCCCAACAACATCTACAAGA 59.625 45.455 0.00 0.00 0.00 3.02
375 376 2.489329 CAGGCCCAACAACATCTACAAG 59.511 50.000 0.00 0.00 0.00 3.16
376 377 2.513753 CAGGCCCAACAACATCTACAA 58.486 47.619 0.00 0.00 0.00 2.41
377 378 1.886222 GCAGGCCCAACAACATCTACA 60.886 52.381 0.00 0.00 0.00 2.74
378 379 0.811281 GCAGGCCCAACAACATCTAC 59.189 55.000 0.00 0.00 0.00 2.59
379 380 0.403655 TGCAGGCCCAACAACATCTA 59.596 50.000 0.00 0.00 0.00 1.98
380 381 0.469705 TTGCAGGCCCAACAACATCT 60.470 50.000 0.00 0.00 0.00 2.90
381 382 0.037975 CTTGCAGGCCCAACAACATC 60.038 55.000 0.00 0.00 0.00 3.06
382 383 0.760189 ACTTGCAGGCCCAACAACAT 60.760 50.000 0.00 0.00 0.00 2.71
383 384 1.381056 ACTTGCAGGCCCAACAACA 60.381 52.632 0.00 0.00 0.00 3.33
384 385 1.067916 CACTTGCAGGCCCAACAAC 59.932 57.895 0.00 0.00 0.00 3.32
385 386 2.795110 GCACTTGCAGGCCCAACAA 61.795 57.895 0.00 0.00 41.59 2.83
386 387 3.225798 GCACTTGCAGGCCCAACA 61.226 61.111 0.00 0.00 41.59 3.33
396 397 2.119457 GCTACAAACTTGTGCACTTGC 58.881 47.619 19.41 4.55 42.31 4.01
397 398 3.419264 TGCTACAAACTTGTGCACTTG 57.581 42.857 19.41 15.92 42.31 3.16
401 402 2.364632 ACTGTGCTACAAACTTGTGCA 58.635 42.857 5.34 9.70 42.31 4.57
402 403 3.607078 GCTACTGTGCTACAAACTTGTGC 60.607 47.826 5.34 7.49 42.31 4.57
403 404 3.559655 TGCTACTGTGCTACAAACTTGTG 59.440 43.478 5.34 0.00 42.31 3.33
404 405 3.804036 TGCTACTGTGCTACAAACTTGT 58.196 40.909 0.07 0.07 44.86 3.16
405 406 4.273480 ACTTGCTACTGTGCTACAAACTTG 59.727 41.667 0.00 0.00 0.00 3.16
406 407 4.451900 ACTTGCTACTGTGCTACAAACTT 58.548 39.130 0.00 0.00 0.00 2.66
407 408 4.073293 ACTTGCTACTGTGCTACAAACT 57.927 40.909 0.00 0.00 0.00 2.66
408 409 4.813296 AACTTGCTACTGTGCTACAAAC 57.187 40.909 0.00 0.00 0.00 2.93
409 410 4.274950 GGAAACTTGCTACTGTGCTACAAA 59.725 41.667 0.00 0.00 0.00 2.83
410 411 3.813166 GGAAACTTGCTACTGTGCTACAA 59.187 43.478 0.00 0.00 0.00 2.41
411 412 3.071023 AGGAAACTTGCTACTGTGCTACA 59.929 43.478 0.00 0.00 37.44 2.74
412 413 3.665190 AGGAAACTTGCTACTGTGCTAC 58.335 45.455 0.00 0.00 37.44 3.58
414 415 2.938956 AGGAAACTTGCTACTGTGCT 57.061 45.000 0.00 0.00 37.44 4.40
424 425 6.210980 AGGTCATCCACTTGAAGGAAACTTG 61.211 44.000 0.00 0.00 43.50 3.16
425 426 4.141158 AGGTCATCCACTTGAAGGAAACTT 60.141 41.667 0.00 0.00 45.18 2.66
426 427 3.395941 AGGTCATCCACTTGAAGGAAACT 59.604 43.478 0.00 0.00 38.93 2.66
427 428 3.756117 AGGTCATCCACTTGAAGGAAAC 58.244 45.455 0.00 0.00 38.93 2.78
428 429 5.514834 CCTTAGGTCATCCACTTGAAGGAAA 60.515 44.000 0.00 0.00 38.93 3.13
429 430 4.019321 CCTTAGGTCATCCACTTGAAGGAA 60.019 45.833 0.00 0.00 38.93 3.36
430 431 3.519510 CCTTAGGTCATCCACTTGAAGGA 59.480 47.826 0.00 0.00 39.97 3.36
431 432 3.264450 ACCTTAGGTCATCCACTTGAAGG 59.736 47.826 0.00 0.00 35.89 3.46
432 433 4.559862 ACCTTAGGTCATCCACTTGAAG 57.440 45.455 0.00 0.00 35.89 3.02
433 434 4.993705 AACCTTAGGTCATCCACTTGAA 57.006 40.909 3.62 0.00 33.12 2.69
434 435 4.993705 AAACCTTAGGTCATCCACTTGA 57.006 40.909 3.62 0.00 33.12 3.02
435 436 6.414732 TGATAAACCTTAGGTCATCCACTTG 58.585 40.000 17.80 0.00 33.12 3.16
436 437 6.636454 TGATAAACCTTAGGTCATCCACTT 57.364 37.500 17.80 5.73 33.12 3.16
437 438 6.636454 TTGATAAACCTTAGGTCATCCACT 57.364 37.500 17.80 0.00 33.12 4.00
438 439 6.486993 GGATTGATAAACCTTAGGTCATCCAC 59.513 42.308 17.80 11.40 33.12 4.02
439 440 6.601332 GGATTGATAAACCTTAGGTCATCCA 58.399 40.000 17.80 10.94 33.12 3.41
440 441 5.701290 CGGATTGATAAACCTTAGGTCATCC 59.299 44.000 17.80 13.89 33.12 3.51
441 442 6.202954 CACGGATTGATAAACCTTAGGTCATC 59.797 42.308 3.62 11.24 33.12 2.92
442 443 6.055588 CACGGATTGATAAACCTTAGGTCAT 58.944 40.000 3.62 0.80 33.12 3.06
443 444 5.424757 CACGGATTGATAAACCTTAGGTCA 58.575 41.667 3.62 0.00 33.12 4.02
444 445 4.814771 CCACGGATTGATAAACCTTAGGTC 59.185 45.833 3.62 0.00 33.12 3.85
445 446 4.384868 CCCACGGATTGATAAACCTTAGGT 60.385 45.833 0.00 0.00 37.65 3.08
446 447 4.134563 CCCACGGATTGATAAACCTTAGG 58.865 47.826 0.00 0.00 0.00 2.69
447 448 5.031066 TCCCACGGATTGATAAACCTTAG 57.969 43.478 0.00 0.00 0.00 2.18
448 449 4.141574 CCTCCCACGGATTGATAAACCTTA 60.142 45.833 0.00 0.00 0.00 2.69
449 450 3.371595 CCTCCCACGGATTGATAAACCTT 60.372 47.826 0.00 0.00 0.00 3.50
450 451 2.172717 CCTCCCACGGATTGATAAACCT 59.827 50.000 0.00 0.00 0.00 3.50
451 452 2.092592 ACCTCCCACGGATTGATAAACC 60.093 50.000 0.00 0.00 0.00 3.27
452 453 2.943033 CACCTCCCACGGATTGATAAAC 59.057 50.000 0.00 0.00 0.00 2.01
453 454 2.574369 ACACCTCCCACGGATTGATAAA 59.426 45.455 0.00 0.00 0.00 1.40
454 455 2.193127 ACACCTCCCACGGATTGATAA 58.807 47.619 0.00 0.00 0.00 1.75
455 456 1.874129 ACACCTCCCACGGATTGATA 58.126 50.000 0.00 0.00 0.00 2.15
456 457 1.762957 CTACACCTCCCACGGATTGAT 59.237 52.381 0.00 0.00 0.00 2.57
457 458 1.191535 CTACACCTCCCACGGATTGA 58.808 55.000 0.00 0.00 0.00 2.57
458 459 0.178068 CCTACACCTCCCACGGATTG 59.822 60.000 0.00 0.00 0.00 2.67
459 460 0.042131 TCCTACACCTCCCACGGATT 59.958 55.000 0.00 0.00 0.00 3.01
460 461 0.264955 ATCCTACACCTCCCACGGAT 59.735 55.000 0.00 0.00 0.00 4.18
461 462 0.686441 CATCCTACACCTCCCACGGA 60.686 60.000 0.00 0.00 0.00 4.69
462 463 0.686441 TCATCCTACACCTCCCACGG 60.686 60.000 0.00 0.00 0.00 4.94
463 464 1.137086 CTTCATCCTACACCTCCCACG 59.863 57.143 0.00 0.00 0.00 4.94
464 465 2.467880 TCTTCATCCTACACCTCCCAC 58.532 52.381 0.00 0.00 0.00 4.61
465 466 2.940514 TCTTCATCCTACACCTCCCA 57.059 50.000 0.00 0.00 0.00 4.37
466 467 2.370189 CCATCTTCATCCTACACCTCCC 59.630 54.545 0.00 0.00 0.00 4.30
467 468 3.041946 ACCATCTTCATCCTACACCTCC 58.958 50.000 0.00 0.00 0.00 4.30
468 469 3.964031 AGACCATCTTCATCCTACACCTC 59.036 47.826 0.00 0.00 0.00 3.85
469 470 3.964031 GAGACCATCTTCATCCTACACCT 59.036 47.826 0.00 0.00 0.00 4.00
470 471 3.964031 AGAGACCATCTTCATCCTACACC 59.036 47.826 0.00 0.00 32.99 4.16
471 472 4.892934 AGAGAGACCATCTTCATCCTACAC 59.107 45.833 0.00 0.00 38.84 2.90
472 473 5.136068 AGAGAGACCATCTTCATCCTACA 57.864 43.478 0.00 0.00 38.84 2.74
473 474 5.136828 TGAGAGAGACCATCTTCATCCTAC 58.863 45.833 0.00 0.00 38.84 3.18
474 475 5.394562 TGAGAGAGACCATCTTCATCCTA 57.605 43.478 0.00 0.00 38.84 2.94
475 476 4.262891 TGAGAGAGACCATCTTCATCCT 57.737 45.455 0.00 0.00 38.84 3.24
476 477 4.740334 GCTTGAGAGAGACCATCTTCATCC 60.740 50.000 0.00 0.00 38.84 3.51
477 478 4.141981 TGCTTGAGAGAGACCATCTTCATC 60.142 45.833 0.00 0.00 38.84 2.92
478 479 3.773667 TGCTTGAGAGAGACCATCTTCAT 59.226 43.478 0.00 0.00 38.84 2.57
479 480 3.168292 TGCTTGAGAGAGACCATCTTCA 58.832 45.455 0.00 0.00 38.84 3.02
480 481 3.883830 TGCTTGAGAGAGACCATCTTC 57.116 47.619 0.00 0.00 38.84 2.87
481 482 3.307339 GGTTGCTTGAGAGAGACCATCTT 60.307 47.826 0.00 0.00 38.84 2.40
482 483 2.235898 GGTTGCTTGAGAGAGACCATCT 59.764 50.000 0.00 0.00 42.61 2.90
483 484 2.626840 GGTTGCTTGAGAGAGACCATC 58.373 52.381 0.00 0.00 32.64 3.51
484 485 1.280421 GGGTTGCTTGAGAGAGACCAT 59.720 52.381 0.00 0.00 33.49 3.55
485 486 0.687354 GGGTTGCTTGAGAGAGACCA 59.313 55.000 0.00 0.00 33.49 4.02
486 487 0.980423 AGGGTTGCTTGAGAGAGACC 59.020 55.000 0.00 0.00 0.00 3.85
487 488 1.943507 GCAGGGTTGCTTGAGAGAGAC 60.944 57.143 0.00 0.00 46.95 3.36
488 489 0.322975 GCAGGGTTGCTTGAGAGAGA 59.677 55.000 0.00 0.00 46.95 3.10
489 490 2.851798 GCAGGGTTGCTTGAGAGAG 58.148 57.895 0.00 0.00 46.95 3.20
499 500 3.742433 TGTTATTTGGTTGCAGGGTTG 57.258 42.857 0.00 0.00 0.00 3.77
500 501 4.407296 TCTTTGTTATTTGGTTGCAGGGTT 59.593 37.500 0.00 0.00 0.00 4.11
501 502 3.964031 TCTTTGTTATTTGGTTGCAGGGT 59.036 39.130 0.00 0.00 0.00 4.34
502 503 4.039124 ACTCTTTGTTATTTGGTTGCAGGG 59.961 41.667 0.00 0.00 0.00 4.45
503 504 5.010012 AGACTCTTTGTTATTTGGTTGCAGG 59.990 40.000 0.00 0.00 0.00 4.85
504 505 6.016777 AGAGACTCTTTGTTATTTGGTTGCAG 60.017 38.462 0.00 0.00 0.00 4.41
505 506 5.827797 AGAGACTCTTTGTTATTTGGTTGCA 59.172 36.000 0.00 0.00 0.00 4.08
506 507 6.205658 AGAGAGACTCTTTGTTATTTGGTTGC 59.794 38.462 6.40 0.00 37.60 4.17
507 508 7.736447 AGAGAGACTCTTTGTTATTTGGTTG 57.264 36.000 6.40 0.00 37.60 3.77
518 519 6.018959 TGGGGACACAAGAGAGACTCTTTG 62.019 50.000 6.40 14.19 41.04 2.77
519 520 3.950356 TGGGGACACAAGAGAGACTCTTT 60.950 47.826 6.40 0.00 41.04 2.52
520 521 2.426414 TGGGGACACAAGAGAGACTCTT 60.426 50.000 6.40 8.02 43.20 2.85
521 522 1.148027 TGGGGACACAAGAGAGACTCT 59.852 52.381 4.14 4.14 37.77 3.24
522 523 1.633774 TGGGGACACAAGAGAGACTC 58.366 55.000 0.00 0.00 33.40 3.36
523 524 1.694696 GTTGGGGACACAAGAGAGACT 59.305 52.381 0.00 0.00 42.67 3.24
524 525 1.416401 TGTTGGGGACACAAGAGAGAC 59.584 52.381 0.00 0.00 42.67 3.36
525 526 1.801242 TGTTGGGGACACAAGAGAGA 58.199 50.000 0.00 0.00 42.67 3.10
534 535 1.149986 TATTGGGTGTGTTGGGGACA 58.850 50.000 0.00 0.00 39.83 4.02
535 536 2.296073 TTATTGGGTGTGTTGGGGAC 57.704 50.000 0.00 0.00 0.00 4.46
536 537 3.330126 TTTTATTGGGTGTGTTGGGGA 57.670 42.857 0.00 0.00 0.00 4.81
537 538 3.307339 CCATTTTATTGGGTGTGTTGGGG 60.307 47.826 0.00 0.00 32.80 4.96
538 539 3.326297 ACCATTTTATTGGGTGTGTTGGG 59.674 43.478 0.00 0.00 41.35 4.12
539 540 4.615588 ACCATTTTATTGGGTGTGTTGG 57.384 40.909 0.00 0.00 41.35 3.77
540 541 8.614469 AATTTACCATTTTATTGGGTGTGTTG 57.386 30.769 0.00 0.00 41.35 3.33
564 565 9.095700 GGGCAAAAGGATAATTAACCCATATAA 57.904 33.333 8.09 0.00 34.82 0.98
565 566 8.461033 AGGGCAAAAGGATAATTAACCCATATA 58.539 33.333 8.09 0.00 37.28 0.86
566 567 7.312956 AGGGCAAAAGGATAATTAACCCATAT 58.687 34.615 8.09 0.00 37.28 1.78
567 568 6.688554 AGGGCAAAAGGATAATTAACCCATA 58.311 36.000 8.09 0.00 37.28 2.74
749 750 5.219633 GTGCAACGGTCTGAATAAAATTGT 58.780 37.500 0.00 0.00 0.00 2.71
774 775 3.099841 TGGGTCCCACAAGCCACA 61.100 61.111 6.47 0.00 41.74 4.17
1121 1124 1.616865 AGAACGGACGATTCTGGTTCA 59.383 47.619 0.00 0.00 37.49 3.18
1143 1146 1.672030 CCCATTCTCGCTGCACACA 60.672 57.895 0.00 0.00 0.00 3.72
1215 1218 6.127814 CCTGCATGAACACTAAACAGATCAAT 60.128 38.462 0.00 0.00 0.00 2.57
1697 1701 7.227910 AGCTGCATTTCATTGATCAAAAGTTTT 59.772 29.630 13.09 0.00 0.00 2.43
2211 2221 1.679977 TCCTAGCGGTTACCAGCGT 60.680 57.895 1.13 0.00 45.98 5.07


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.