AutoCloner

Multiple sequence alignment - TraesCS4A01G380100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)

BLAST Results

Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

	qseqid	sseqid	percentage.identical	alignment.length	no.mismatch	no.gap.openings	qstart	qend	sstart	send	evalue	bitscore
0	TraesCS4A01G380100	chr4A	100.000	4496	0	0	1	4496	657487762	657492257	0.000000e+00	8303.0
1	TraesCS4A01G380100	chr4A	83.978	181	26	3	103	281	674359806	674359627	2.150000e-38	171.0
2	TraesCS4A01G380100	chr7D	90.160	3252	200	54	818	3996	45501173	45504377	0.000000e+00	4122.0
3	TraesCS4A01G380100	chr7D	84.892	417	46	12	1	404	45500454	45500866	5.420000e-109	405.0
4	TraesCS4A01G380100	chr7D	87.132	272	30	4	368	635	45500861	45501131	2.030000e-78	303.0
5	TraesCS4A01G380100	chr7D	84.672	137	14	5	4074	4204	45504516	45504651	3.650000e-26	130.0
6	TraesCS4A01G380100	chr7D	83.607	122	12	7	4249	4367	592862463	592862347	1.710000e-19	108.0
7	TraesCS4A01G380100	chr7D	95.000	40	2	0	1898	1937	620724155	620724116	3.750000e-06	63.9
8	TraesCS4A01G380100	chr7A	89.187	1304	114	15	2279	3566	47556962	47558254	0.000000e+00	1602.0
9	TraesCS4A01G380100	chr7A	89.211	1103	59	22	818	1877	47554579	47555664	0.000000e+00	1323.0
10	TraesCS4A01G380100	chr7A	85.481	613	70	14	1	601	47553819	47554424	4.940000e-174	621.0
11	TraesCS4A01G380100	chr7A	84.150	612	73	12	1	601	47552892	47553490	5.050000e-159	571.0
12	TraesCS4A01G380100	chr7A	87.253	455	25	12	1852	2274	47556382	47556835	5.230000e-134	488.0
13	TraesCS4A01G380100	chr7A	87.624	202	19	4	1953	2152	47555705	47555902	3.500000e-56	230.0
14	TraesCS4A01G380100	chr7A	91.935	124	7	3	900	1021	47553661	47553783	2.150000e-38	171.0
15	TraesCS4A01G380100	chr7A	91.667	84	5	2	1	84	47551625	47551706	1.020000e-21	115.0
16	TraesCS4A01G380100	chr7A	89.773	88	9	0	3769	3856	47558252	47558339	3.680000e-21	113.0
17	TraesCS4A01G380100	chr7A	92.537	67	2	3	2153	2216	47555926	47555992	4.790000e-15	93.5
18	TraesCS4A01G380100	chr5D	89.010	1101	56	33	818	1901	125175434	125174382	0.000000e+00	1303.0
19	TraesCS4A01G380100	chr5D	86.252	1142	110	24	2211	3320	125174326	125173200	0.000000e+00	1195.0
20	TraesCS4A01G380100	chr5D	88.038	627	54	9	3351	3964	125173204	125172586	0.000000e+00	723.0
21	TraesCS4A01G380100	chr5D	85.161	620	71	10	1	601	125176132	125175515	2.300000e-172	616.0
22	TraesCS4A01G380100	chr5D	94.558	147	6	2	672	818	72208588	72208732	4.530000e-55	226.0
23	TraesCS4A01G380100	chr5D	90.476	105	6	2	2279	2379	125174325	125174221	7.840000e-28	135.0
24	TraesCS4A01G380100	chr5D	95.349	43	1	1	1892	1934	265556199	265556158	2.900000e-07	67.6
25	TraesCS4A01G380100	chr5D	97.368	38	1	0	1897	1934	275415523	275415486	1.040000e-06	65.8
26	TraesCS4A01G380100	chr5D	90.698	43	1	1	2340	2379	125174341	125174299	2.000000e-03	54.7
27	TraesCS4A01G380100	chr3D	87.786	1138	63	25	822	1901	423667226	423668345	0.000000e+00	1262.0
28	TraesCS4A01G380100	chr3D	86.504	615	60	16	1	598	423665647	423666255	0.000000e+00	654.0
29	TraesCS4A01G380100	chr3D	83.432	676	60	30	1	660	423666595	423667234	8.380000e-162	580.0
30	TraesCS4A01G380100	chr3D	92.481	133	8	2	3106	3237	423670042	423670173	5.940000e-44	189.0
31	TraesCS4A01G380100	chr3D	92.473	93	6	1	588	679	423666277	423666369	1.010000e-26	132.0
32	TraesCS4A01G380100	chr2D	87.356	609	57	15	1	598	34682217	34682816	0.000000e+00	680.0
33	TraesCS4A01G380100	chr2D	86.829	615	59	14	1	598	34681023	34681632	0.000000e+00	667.0
34	TraesCS4A01G380100	chr2D	86.743	611	60	14	1	601	34683150	34683749	0.000000e+00	660.0
35	TraesCS4A01G380100	chr2D	83.333	360	29	10	818	1160	34683803	34684148	2.030000e-78	303.0
36	TraesCS4A01G380100	chr2D	91.216	148	13	0	675	822	432746057	432745910	7.630000e-48	202.0
37	TraesCS4A01G380100	chr2D	82.353	204	18	6	818	1021	34682929	34683114	1.290000e-35	161.0
38	TraesCS4A01G380100	chr2D	86.111	108	11	3	4273	4380	3754310	3754207	3.680000e-21	113.0
39	TraesCS4A01G380100	chr6A	80.719	612	70	22	1	600	525607351	525607926	2.480000e-117	433.0
40	TraesCS4A01G380100	chr6A	92.568	148	10	1	679	825	551284177	551284030	1.270000e-50	211.0
41	TraesCS4A01G380100	chr6A	89.344	122	12	1	852	973	525608210	525608330	7.790000e-33	152.0
42	TraesCS4A01G380100	chr2A	95.070	142	7	0	681	822	536269510	536269651	1.630000e-54	224.0
43	TraesCS4A01G380100	chr5B	92.617	149	11	0	676	824	634339448	634339596	9.800000e-52	215.0
44	TraesCS4A01G380100	chr5B	84.615	78	7	3	1897	1969	312760382	312760305	6.240000e-09	73.1
45	TraesCS4A01G380100	chr5B	95.349	43	1	1	1892	1934	298701004	298700963	2.900000e-07	67.6
46	TraesCS4A01G380100	chrUn	93.056	144	10	0	679	822	136397196	136397339	1.270000e-50	211.0
47	TraesCS4A01G380100	chr3B	92.361	144	11	0	679	822	416801450	416801307	5.900000e-49	206.0
48	TraesCS4A01G380100	chr3B	100.000	38	0	0	1897	1934	405231278	405231315	2.240000e-08	71.3
49	TraesCS4A01G380100	chr3A	93.478	138	9	0	681	818	710940832	710940969	5.900000e-49	206.0
50	TraesCS4A01G380100	chr5A	92.857	140	10	0	679	818	707232734	707232873	2.120000e-48	204.0
51	TraesCS4A01G380100	chr5A	95.349	43	1	1	1892	1934	353071714	353071673	2.900000e-07	67.6
52	TraesCS4A01G380100	chr6D	80.000	220	36	8	97	313	304115596	304115810	6.020000e-34	156.0

These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

	query	scaffold	start	end	length	rev.comp	avg.bitscore	max.bitscore	avg.percent.identical	query.start	query.end	num_hsp	groupid	homo_length
0	TraesCS4A01G380100	chr4A	657487762	657492257	4495	False	8303.000000	8303	100.0000	1	4496	1	chr4A.!!$F1	4495
1	TraesCS4A01G380100	chr7D	45500454	45504651	4197	False	1240.000000	4122	86.7140	1	4204	4	chr7D.!!$F1	4203
2	TraesCS4A01G380100	chr7A	47551625	47558339	6714	False	532.750000	1602	88.8818	1	3856	10	chr7A.!!$F1	3855
3	TraesCS4A01G380100	chr5D	125172586	125176132	3546	True	671.116667	1303	88.2725	1	3964	6	chr5D.!!$R3	3963
4	TraesCS4A01G380100	chr3D	423665647	423670173	4526	False	563.400000	1262	88.5352	1	3237	5	chr3D.!!$F1	3236
5	TraesCS4A01G380100	chr2D	34681023	34684148	3125	False	494.200000	680	85.3228	1	1160	5	chr2D.!!$F1	1159
6	TraesCS4A01G380100	chr6A	525607351	525608330	979	False	292.500000	433	85.0315	1	973	2	chr6A.!!$F1	972

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
899	4571	0.108963	AATGAAACCGACCGAACCCA	59.891	50.0	0.00	0.00	0.00	4.51	F
1581	6188	0.181114	CGATGATGGGGCAAGAGGAA	59.819	55.0	0.00	0.00	0.00	3.36	F
2613	9242	0.104934	ATAGGGCCAAGATCGGGACT	60.105	55.0	6.18	9.73	32.41	3.85	F

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Hairpin	End Stability	Orientation
2392	7965	0.257039	AGATTTGGCGAATGAGGGCT	59.743	50.0	4.28	0.00	5.19	R
2919	9557	0.537653	TTGACACCGACACAGTTGGA	59.462	50.0	10.33	39.36	3.53	R
4402	11148	0.030773	GATGACGATACGCCTGAGCA	59.969	55.0	0.00	39.83	4.26	R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
41	42	8.037758	AGAGGCGATAAACAATAGGATAATCAG	58.962	37.037	0.00	0.00	0.00	2.90
84	86	5.886609	TGACTTCAATTCATTTAGGACCCA	58.113	37.500	0.00	0.00	0.00	4.51
85	87	5.710099	TGACTTCAATTCATTTAGGACCCAC	59.290	40.000	0.00	0.00	0.00	4.61
86	88	4.700213	ACTTCAATTCATTTAGGACCCACG	59.300	41.667	0.00	0.00	0.00	4.94
87	89	4.561500	TCAATTCATTTAGGACCCACGA	57.438	40.909	0.00	0.00	0.00	4.35
89	91	5.317808	TCAATTCATTTAGGACCCACGAAA	58.682	37.500	0.00	0.00	0.00	3.46
90	92	5.770663	TCAATTCATTTAGGACCCACGAAAA	59.229	36.000	0.00	0.00	0.00	2.29
91	93	6.435904	TCAATTCATTTAGGACCCACGAAAAT	59.564	34.615	0.00	0.00	0.00	1.82
92	94	5.890424	TTCATTTAGGACCCACGAAAATC	57.110	39.130	0.00	0.00	0.00	2.17
93	95	4.912586	TCATTTAGGACCCACGAAAATCA	58.087	39.130	0.00	0.00	0.00	2.57
94	96	4.941263	TCATTTAGGACCCACGAAAATCAG	59.059	41.667	0.00	0.00	0.00	2.90
95	97	2.396590	TAGGACCCACGAAAATCAGC	57.603	50.000	0.00	0.00	0.00	4.26
112	1392	9.538508	GAAAATCAGCTTTAGGCATGATAAATT	57.461	29.630	0.00	0.00	44.79	1.82
179	1460	4.481112	GGCGAGCATGGCAAACCG	62.481	66.667	0.00	0.00	43.90	4.44
239	1525	4.268405	GCAAACTAAAATTGCCATCATCGG	59.732	41.667	0.00	0.00	45.73	4.18
254	1540	6.700352	CCATCATCGGGCCAAATATAAATTT	58.300	36.000	4.39	0.00	35.65	1.82
264	1550	9.353431	GGGCCAAATATAAATTTCCATGAAAAT	57.647	29.630	4.39	0.00	35.11	1.82
343	1634	7.993183	TCATTTAACCCTCATCAGATTAAGGAC	59.007	37.037	9.44	0.00	0.00	3.85
359	1651	9.259832	AGATTAAGGACAAAATTTCAAGCCTAT	57.740	29.630	0.00	0.00	0.00	2.57
366	1658	7.064966	GGACAAAATTTCAAGCCTATCAAATGG	59.935	37.037	0.00	0.00	0.00	3.16
427	1752	5.596836	AAATGCATTCCCACACGAATATT	57.403	34.783	13.38	0.00	31.19	1.28
429	1754	6.899393	AATGCATTCCCACACGAATATTAT	57.101	33.333	5.99	0.00	31.19	1.28
506	1831	5.667466	GAAGGGGTACATCGATGTTCTAAA	58.333	41.667	34.06	14.84	41.97	1.85
687	4347	8.541899	TTTTTAAGTTGATCTAAGGGGTTGTT	57.458	30.769	0.00	0.00	0.00	2.83
688	4348	7.754851	TTTAAGTTGATCTAAGGGGTTGTTC	57.245	36.000	0.00	0.00	0.00	3.18
689	4349	3.939066	AGTTGATCTAAGGGGTTGTTCG	58.061	45.455	0.00	0.00	0.00	3.95
690	4350	3.007635	GTTGATCTAAGGGGTTGTTCGG	58.992	50.000	0.00	0.00	0.00	4.30
691	4351	2.262637	TGATCTAAGGGGTTGTTCGGT	58.737	47.619	0.00	0.00	0.00	4.69
692	4352	3.443052	TGATCTAAGGGGTTGTTCGGTA	58.557	45.455	0.00	0.00	0.00	4.02
693	4353	3.839490	TGATCTAAGGGGTTGTTCGGTAA	59.161	43.478	0.00	0.00	0.00	2.85
694	4354	4.472108	TGATCTAAGGGGTTGTTCGGTAAT	59.528	41.667	0.00	0.00	0.00	1.89
695	4355	4.476628	TCTAAGGGGTTGTTCGGTAATC	57.523	45.455	0.00	0.00	0.00	1.75
696	4356	2.502142	AAGGGGTTGTTCGGTAATCC	57.498	50.000	0.00	0.00	0.00	3.01
697	4357	1.665137	AGGGGTTGTTCGGTAATCCT	58.335	50.000	0.00	0.00	0.00	3.24
698	4358	1.558294	AGGGGTTGTTCGGTAATCCTC	59.442	52.381	0.00	0.00	0.00	3.71
699	4359	1.407851	GGGGTTGTTCGGTAATCCTCC	60.408	57.143	0.00	0.00	0.00	4.30
700	4360	1.407851	GGGTTGTTCGGTAATCCTCCC	60.408	57.143	0.00	0.00	0.00	4.30
701	4361	1.279846	GGTTGTTCGGTAATCCTCCCA	59.720	52.381	0.00	0.00	0.00	4.37
702	4362	2.353323	GTTGTTCGGTAATCCTCCCAC	58.647	52.381	0.00	0.00	0.00	4.61
703	4363	1.946984	TGTTCGGTAATCCTCCCACT	58.053	50.000	0.00	0.00	0.00	4.00
704	4364	1.829222	TGTTCGGTAATCCTCCCACTC	59.171	52.381	0.00	0.00	0.00	3.51
705	4365	1.138464	GTTCGGTAATCCTCCCACTCC	59.862	57.143	0.00	0.00	0.00	3.85
706	4366	0.754217	TCGGTAATCCTCCCACTCCG	60.754	60.000	0.00	0.00	38.16	4.63
707	4367	1.041447	CGGTAATCCTCCCACTCCGT	61.041	60.000	0.00	0.00	33.20	4.69
708	4368	0.464452	GGTAATCCTCCCACTCCGTG	59.536	60.000	0.00	0.00	0.00	4.94
709	4369	1.481871	GTAATCCTCCCACTCCGTGA	58.518	55.000	0.00	0.00	35.23	4.35
710	4370	1.829222	GTAATCCTCCCACTCCGTGAA	59.171	52.381	0.00	0.00	35.23	3.18
711	4371	1.358152	AATCCTCCCACTCCGTGAAA	58.642	50.000	0.00	0.00	35.23	2.69
712	4372	1.584724	ATCCTCCCACTCCGTGAAAT	58.415	50.000	0.00	0.00	35.23	2.17
713	4373	2.241281	TCCTCCCACTCCGTGAAATA	57.759	50.000	0.00	0.00	35.23	1.40
714	4374	2.759355	TCCTCCCACTCCGTGAAATAT	58.241	47.619	0.00	0.00	35.23	1.28
715	4375	2.698797	TCCTCCCACTCCGTGAAATATC	59.301	50.000	0.00	0.00	35.23	1.63
716	4376	2.434336	CCTCCCACTCCGTGAAATATCA	59.566	50.000	0.00	0.00	35.23	2.15
717	4377	3.493350	CCTCCCACTCCGTGAAATATCAG	60.493	52.174	0.00	0.00	35.88	2.90
718	4378	2.434336	TCCCACTCCGTGAAATATCAGG	59.566	50.000	0.00	0.00	40.35	3.86
719	4379	2.434336	CCCACTCCGTGAAATATCAGGA	59.566	50.000	0.46	0.03	42.66	3.86
720	4380	3.071602	CCCACTCCGTGAAATATCAGGAT	59.928	47.826	0.46	0.00	42.66	3.24
721	4381	4.310769	CCACTCCGTGAAATATCAGGATC	58.689	47.826	0.46	0.00	42.66	3.36
722	4382	4.039730	CCACTCCGTGAAATATCAGGATCT	59.960	45.833	0.00	0.00	42.66	2.75
723	4383	4.987285	CACTCCGTGAAATATCAGGATCTG	59.013	45.833	0.00	0.00	42.66	2.90
724	4384	3.993081	CTCCGTGAAATATCAGGATCTGC	59.007	47.826	0.00	0.00	42.66	4.26
725	4385	2.733552	CCGTGAAATATCAGGATCTGCG	59.266	50.000	0.00	0.00	42.66	5.18
726	4386	2.733552	CGTGAAATATCAGGATCTGCGG	59.266	50.000	0.00	0.00	42.66	5.69
727	4387	3.552890	CGTGAAATATCAGGATCTGCGGA	60.553	47.826	0.00	0.00	42.66	5.54
728	4388	3.993081	GTGAAATATCAGGATCTGCGGAG	59.007	47.826	0.00	0.00	35.88	4.63
729	4389	5.619626	GTGAAATATCAGGATCTGCGGAGC	61.620	50.000	0.98	0.98	46.76	4.70
756	4416	2.270850	CCCCCTCCGCGATTTTGA	59.729	61.111	8.23	0.00	0.00	2.69
757	4417	1.377987	CCCCCTCCGCGATTTTGAA	60.378	57.895	8.23	0.00	0.00	2.69
758	4418	1.654023	CCCCCTCCGCGATTTTGAAC	61.654	60.000	8.23	0.00	0.00	3.18
759	4419	0.676782	CCCCTCCGCGATTTTGAACT	60.677	55.000	8.23	0.00	0.00	3.01
760	4420	0.447801	CCCTCCGCGATTTTGAACTG	59.552	55.000	8.23	0.00	0.00	3.16
761	4421	0.179189	CCTCCGCGATTTTGAACTGC	60.179	55.000	8.23	0.00	0.00	4.40
762	4422	0.179189	CTCCGCGATTTTGAACTGCC	60.179	55.000	8.23	0.00	0.00	4.85
763	4423	1.511887	CCGCGATTTTGAACTGCCG	60.512	57.895	8.23	0.00	0.00	5.69
764	4424	2.145905	CGCGATTTTGAACTGCCGC	61.146	57.895	0.00	0.00	39.33	6.53
765	4425	1.210155	GCGATTTTGAACTGCCGCT	59.790	52.632	0.00	0.00	39.57	5.52
766	4426	0.794605	GCGATTTTGAACTGCCGCTC	60.795	55.000	0.00	0.00	39.57	5.03
767	4427	0.179189	CGATTTTGAACTGCCGCTCC	60.179	55.000	0.00	0.00	0.00	4.70
768	4428	1.168714	GATTTTGAACTGCCGCTCCT	58.831	50.000	0.00	0.00	0.00	3.69
769	4429	1.131315	GATTTTGAACTGCCGCTCCTC	59.869	52.381	0.00	0.00	0.00	3.71
770	4430	0.889186	TTTTGAACTGCCGCTCCTCC	60.889	55.000	0.00	0.00	0.00	4.30
771	4431	2.050836	TTTGAACTGCCGCTCCTCCA	62.051	55.000	0.00	0.00	0.00	3.86
772	4432	2.125350	GAACTGCCGCTCCTCCAG	60.125	66.667	0.00	0.00	0.00	3.86
773	4433	4.400961	AACTGCCGCTCCTCCAGC	62.401	66.667	0.00	0.00	45.85	4.85
791	4451	3.691342	TCCGGGAGCGGAGTTGTG	61.691	66.667	0.00	0.00	33.62	3.33
792	4452	4.760047	CCGGGAGCGGAGTTGTGG	62.760	72.222	0.00	0.00	0.00	4.17
793	4453	3.691342	CGGGAGCGGAGTTGTGGA	61.691	66.667	0.00	0.00	0.00	4.02
794	4454	2.266055	GGGAGCGGAGTTGTGGAG	59.734	66.667	0.00	0.00	0.00	3.86
795	4455	2.283529	GGGAGCGGAGTTGTGGAGA	61.284	63.158	0.00	0.00	0.00	3.71
796	4456	1.216710	GGAGCGGAGTTGTGGAGAG	59.783	63.158	0.00	0.00	0.00	3.20
797	4457	1.216710	GAGCGGAGTTGTGGAGAGG	59.783	63.158	0.00	0.00	0.00	3.69
798	4458	1.228894	AGCGGAGTTGTGGAGAGGA	60.229	57.895	0.00	0.00	0.00	3.71
799	4459	1.216710	GCGGAGTTGTGGAGAGGAG	59.783	63.158	0.00	0.00	0.00	3.69
800	4460	1.893786	CGGAGTTGTGGAGAGGAGG	59.106	63.158	0.00	0.00	0.00	4.30
801	4461	1.608717	CGGAGTTGTGGAGAGGAGGG	61.609	65.000	0.00	0.00	0.00	4.30
802	4462	0.252284	GGAGTTGTGGAGAGGAGGGA	60.252	60.000	0.00	0.00	0.00	4.20
803	4463	1.645710	GAGTTGTGGAGAGGAGGGAA	58.354	55.000	0.00	0.00	0.00	3.97
804	4464	2.192263	GAGTTGTGGAGAGGAGGGAAT	58.808	52.381	0.00	0.00	0.00	3.01
805	4465	2.169561	GAGTTGTGGAGAGGAGGGAATC	59.830	54.545	0.00	0.00	0.00	2.52
813	4473	2.504519	GGAGGGAATCCGAACGGG	59.495	66.667	13.29	0.00	38.67	5.28
814	4474	2.203029	GAGGGAATCCGAACGGGC	60.203	66.667	13.29	3.69	38.33	6.13
815	4475	3.752088	GAGGGAATCCGAACGGGCC	62.752	68.421	13.29	11.62	38.33	5.80
816	4476	3.793888	GGGAATCCGAACGGGCCT	61.794	66.667	13.29	0.00	34.94	5.19
820	4480	1.296727	GAATCCGAACGGGCCTTAAG	58.703	55.000	13.29	0.00	34.94	1.85
840	4500	7.444183	CCTTAAGTGTCACCTTTTGATCTGTTA	59.556	37.037	0.97	0.00	36.32	2.41
841	4501	6.867662	AAGTGTCACCTTTTGATCTGTTAG	57.132	37.500	0.00	0.00	36.32	2.34
843	4503	4.515191	GTGTCACCTTTTGATCTGTTAGCA	59.485	41.667	0.00	0.00	36.32	3.49
845	4505	5.008613	TGTCACCTTTTGATCTGTTAGCAAC	59.991	40.000	0.00	0.00	36.32	4.17
893	4565	3.064820	CCATTAGGAAATGAAACCGACCG	59.935	47.826	0.00	0.00	44.50	4.79
894	4566	3.681593	TTAGGAAATGAAACCGACCGA	57.318	42.857	0.00	0.00	0.00	4.69
895	4567	2.554370	AGGAAATGAAACCGACCGAA	57.446	45.000	0.00	0.00	0.00	4.30
896	4568	2.148768	AGGAAATGAAACCGACCGAAC	58.851	47.619	0.00	0.00	0.00	3.95
897	4569	1.198408	GGAAATGAAACCGACCGAACC	59.802	52.381	0.00	0.00	0.00	3.62
898	4570	1.198408	GAAATGAAACCGACCGAACCC	59.802	52.381	0.00	0.00	0.00	4.11
899	4571	0.108963	AATGAAACCGACCGAACCCA	59.891	50.000	0.00	0.00	0.00	4.51
900	4572	0.604511	ATGAAACCGACCGAACCCAC	60.605	55.000	0.00	0.00	0.00	4.61
901	4573	1.962822	GAAACCGACCGAACCCACC	60.963	63.158	0.00	0.00	0.00	4.61
902	4574	3.812865	AAACCGACCGAACCCACCG	62.813	63.158	0.00	0.00	0.00	4.94
1065	5672	0.742281	TCGACGACCTCTACTTCCCG	60.742	60.000	0.00	0.00	0.00	5.14
1210	5817	3.744719	CCTTCGACGTGCTCCGGA	61.745	66.667	2.93	2.93	42.24	5.14
1578	6185	4.469883	CCGATGATGGGGCAAGAG	57.530	61.111	0.00	0.00	0.00	2.85
1579	6186	1.228063	CCGATGATGGGGCAAGAGG	60.228	63.158	0.00	0.00	0.00	3.69
1580	6187	1.699054	CCGATGATGGGGCAAGAGGA	61.699	60.000	0.00	0.00	0.00	3.71
1581	6188	0.181114	CGATGATGGGGCAAGAGGAA	59.819	55.000	0.00	0.00	0.00	3.36
1638	6257	7.738437	AGAAGAAGAAGAGGATGAAGAGAAT	57.262	36.000	0.00	0.00	0.00	2.40
1689	6320	2.340337	GTTTGCTTGCTGCCAATTAGG	58.660	47.619	0.00	0.00	42.00	2.69
1709	6340	9.869667	AATTAGGCTTACTCTCTCTATGTTCTA	57.130	33.333	0.00	0.00	0.00	2.10
1752	6409	5.182190	TCTTTGACTGTGCAAGTTTGTGTTA	59.818	36.000	0.00	0.00	40.07	2.41
1756	6413	4.920376	ACTGTGCAAGTTTGTGTTATGAC	58.080	39.130	0.00	0.00	34.57	3.06
1768	6425	9.283768	AGTTTGTGTTATGACTGATACATTGAA	57.716	29.630	0.00	0.00	0.00	2.69
1816	6475	8.745837	CGATTTTGCTTATATAAAACTTGCTGG	58.254	33.333	0.00	0.00	0.00	4.85
1856	6515	5.424121	TCTTGCTTTGTAGTCTTCTTTGC	57.576	39.130	0.00	0.00	0.00	3.68
1871	6561	7.337942	AGTCTTCTTTGCCTATGGAAAATAGTG	59.662	37.037	0.00	0.00	0.00	2.74
1941	7343	4.560819	TGTAAGACGTTTTTGCTGCAAAAG	59.439	37.500	31.59	25.27	42.91	2.27
1980	7386	9.322773	GTTACAGAGGTTGTAGAAAAGTAGTTT	57.677	33.333	0.00	0.00	42.92	2.66
2152	7568	5.413499	TGCTAGGATACGGTTTCTGTTTAC	58.587	41.667	0.00	0.00	46.39	2.01
2323	7891	5.793030	ATATCGGACCCACTCTAAGAAAG	57.207	43.478	0.00	0.00	0.00	2.62
2392	7965	7.168219	ACTTCAGATATAGTGCTTTTTGGTGA	58.832	34.615	0.00	0.00	0.00	4.02
2407	9025	1.377202	GTGAGCCCTCATTCGCCAA	60.377	57.895	0.77	0.00	42.18	4.52
2499	9118	4.770795	CTCAGTCTATCCGGACCATTTTT	58.229	43.478	6.12	0.00	36.95	1.94
2554	9181	4.768807	AGTATAGGTATCAGCCTTCCCT	57.231	45.455	0.00	0.00	39.94	4.20
2564	9191	1.208293	CAGCCTTCCCTCAAGTCCTAC	59.792	57.143	0.00	0.00	0.00	3.18
2596	9225	7.037153	ACCCTTTGTAAGATAAGTGGGTCAATA	60.037	37.037	0.00	0.00	42.42	1.90
2605	9234	0.623723	GTGGGTCAATAGGGCCAAGA	59.376	55.000	6.18	0.00	0.00	3.02
2613	9242	0.104934	ATAGGGCCAAGATCGGGACT	60.105	55.000	6.18	9.73	32.41	3.85
2614	9243	0.759436	TAGGGCCAAGATCGGGACTC	60.759	60.000	6.18	3.25	32.41	3.36
2620	9249	1.186200	CAAGATCGGGACTCTGGTCA	58.814	55.000	0.00	0.00	43.77	4.02
2622	9251	2.959030	CAAGATCGGGACTCTGGTCATA	59.041	50.000	0.00	0.00	43.77	2.15
2626	9255	1.210234	TCGGGACTCTGGTCATACGTA	59.790	52.381	0.00	0.00	43.77	3.57
2669	9298	5.853572	ACACCCAAGGAAACTAGGATTAA	57.146	39.130	0.00	0.00	42.68	1.40
2676	9305	9.304335	CCCAAGGAAACTAGGATTAACTTTTTA	57.696	33.333	0.00	0.00	42.68	1.52
2746	9382	7.010923	GCTGTATGGTCAGATTTAGAAACTCTG	59.989	40.741	1.71	1.71	37.61	3.35
2747	9383	7.907389	TGTATGGTCAGATTTAGAAACTCTGT	58.093	34.615	6.83	0.00	38.05	3.41
2748	9384	8.035394	TGTATGGTCAGATTTAGAAACTCTGTC	58.965	37.037	6.83	2.65	38.05	3.51
2749	9385	6.419484	TGGTCAGATTTAGAAACTCTGTCA	57.581	37.500	6.83	5.07	38.05	3.58
2752	9388	7.388776	TGGTCAGATTTAGAAACTCTGTCATTG	59.611	37.037	6.83	0.00	38.05	2.82
2753	9389	7.389053	GGTCAGATTTAGAAACTCTGTCATTGT	59.611	37.037	6.83	0.00	38.05	2.71
2754	9390	8.778358	GTCAGATTTAGAAACTCTGTCATTGTT	58.222	33.333	6.83	0.00	38.05	2.83
2813	9450	8.245491	TGTGATGAATCTGAAAACAACATATGG	58.755	33.333	7.80	0.00	0.00	2.74
2846	9483	3.331150	TGACTGTACATTTAAGCGGTGG	58.669	45.455	0.00	0.00	0.00	4.61
2909	9547	6.451064	TTTCTCGACTAGAACAGATGCATA	57.549	37.500	0.00	0.00	44.02	3.14
2915	9553	7.886338	TCGACTAGAACAGATGCATAACATAT	58.114	34.615	0.00	0.00	39.84	1.78
2918	9556	9.481340	GACTAGAACAGATGCATAACATATTGA	57.519	33.333	0.00	0.00	39.84	2.57
2942	9580	3.191669	CAACTGTGTCGGTGTCAACTTA	58.808	45.455	0.00	0.00	0.00	2.24
2944	9582	3.192466	ACTGTGTCGGTGTCAACTTAAC	58.808	45.455	0.00	0.00	0.00	2.01
2954	9592	3.673809	GTGTCAACTTAACGTAGAGCTGG	59.326	47.826	0.00	0.00	0.00	4.85
2958	9596	3.299340	ACTTAACGTAGAGCTGGTGTG	57.701	47.619	0.00	0.00	0.00	3.82
2974	9612	2.414559	GGTGTGCGGAGAAATGACAATG	60.415	50.000	0.00	0.00	0.00	2.82
2983	9621	5.639506	CGGAGAAATGACAATGTAGTTCAGT	59.360	40.000	6.12	0.00	0.00	3.41
3009	9647	4.051922	CCAATATGCTAGACTCGGTCAAC	58.948	47.826	0.00	0.00	34.60	3.18
3013	9651	3.014304	TGCTAGACTCGGTCAACCTAT	57.986	47.619	0.00	0.00	34.60	2.57
3017	9655	0.527817	GACTCGGTCAACCTATGGCG	60.528	60.000	0.00	0.00	33.14	5.69
3018	9656	1.255667	ACTCGGTCAACCTATGGCGT	61.256	55.000	0.00	0.00	33.14	5.68
3019	9657	0.806102	CTCGGTCAACCTATGGCGTG	60.806	60.000	0.00	0.00	33.14	5.34
3020	9658	1.079405	CGGTCAACCTATGGCGTGT	60.079	57.895	0.00	0.00	33.14	4.49
3050	9688	1.873591	AGTTACTGTCGCTTTTGGCTG	59.126	47.619	0.00	0.00	39.13	4.85
3085	9723	6.690530	CATTTGCCTTTCCTTATTTGACTGA	58.309	36.000	0.00	0.00	0.00	3.41
3099	9737	8.746052	TTATTTGACTGAAGAGAAAAACCAGA	57.254	30.769	0.00	0.00	0.00	3.86
3109	9747	9.799106	TGAAGAGAAAAACCAGAATATCTTTCT	57.201	29.630	0.00	0.00	36.19	2.52
3151	9791	9.844257	ATCTATTTTCTATCTCTGTTTCCCTTG	57.156	33.333	0.00	0.00	0.00	3.61
3178	9819	2.016905	ACTCTGGTGGAGCAGTAGTT	57.983	50.000	5.78	0.00	45.48	2.24
3210	9851	5.403766	CCGTAGCAGATCATTAGATGTTCAC	59.596	44.000	0.00	0.00	33.72	3.18
3252	9893	2.594962	GGTGGTTGCACACGACGAG	61.595	63.158	0.00	0.00	42.23	4.18
3253	9894	2.279851	TGGTTGCACACGACGAGG	60.280	61.111	0.00	0.00	0.00	4.63
3254	9895	3.712881	GGTTGCACACGACGAGGC	61.713	66.667	0.00	2.32	0.00	4.70
3255	9896	2.661866	GTTGCACACGACGAGGCT	60.662	61.111	0.00	0.00	0.00	4.58
3256	9897	1.372499	GTTGCACACGACGAGGCTA	60.372	57.895	0.00	0.00	0.00	3.93
3330	9971	3.115354	TCCCCCGAGGAGATGGAA	58.885	61.111	0.00	0.00	40.93	3.53
3372	10013	1.347707	TCGGTGATGCAGGAGAAGTTT	59.652	47.619	0.00	0.00	0.00	2.66
3378	10019	2.154854	TGCAGGAGAAGTTTCTGTCG	57.845	50.000	0.00	0.00	37.73	4.35
3505	10146	2.173519	ACGAAGATTAGGACGGTCCAA	58.826	47.619	27.87	19.21	39.61	3.53
3508	10149	3.998341	CGAAGATTAGGACGGTCCAAAAA	59.002	43.478	27.87	18.44	39.61	1.94
3509	10150	4.142966	CGAAGATTAGGACGGTCCAAAAAC	60.143	45.833	27.87	18.74	39.61	2.43
3510	10151	4.635699	AGATTAGGACGGTCCAAAAACT	57.364	40.909	27.87	20.39	39.61	2.66
3511	10152	4.576879	AGATTAGGACGGTCCAAAAACTC	58.423	43.478	27.87	15.83	39.61	3.01
3512	10153	2.443887	TAGGACGGTCCAAAAACTCG	57.556	50.000	27.87	0.00	39.61	4.18
3546	10187	5.058490	GCTATTTAAGTTGCATACCCGGTA	58.942	41.667	0.00	0.00	0.00	4.02
3582	10227	5.527582	CCATGTTTAATAGACCCTGTAGTGC	59.472	44.000	0.00	0.00	0.00	4.40
3591	10236	2.548480	GACCCTGTAGTGCTGTTTGTTC	59.452	50.000	0.00	0.00	0.00	3.18
3606	10251	5.150683	TGTTTGTTCGCAGCATGTAAATAC	58.849	37.500	0.00	0.00	39.31	1.89
3653	10298	4.827692	ACACAGACACAGAGTTTACACAA	58.172	39.130	0.00	0.00	0.00	3.33
3679	10325	3.908476	TGAGGTGTGATGAGCTCTATCT	58.092	45.455	16.19	1.83	40.48	1.98
3680	10326	3.635836	TGAGGTGTGATGAGCTCTATCTG	59.364	47.826	16.19	0.00	40.48	2.90
3731	10383	2.002586	CCGTCTGGTTCTATGTTGCTG	58.997	52.381	0.00	0.00	0.00	4.41
3735	10387	0.036164	TGGTTCTATGTTGCTGCCGT	59.964	50.000	0.00	0.00	0.00	5.68
3739	10391	3.377172	GGTTCTATGTTGCTGCCGTTTAT	59.623	43.478	0.00	0.00	0.00	1.40
3848	10511	8.837389	GTTAGTTTCTCCTTGTCAAAATGTAGT	58.163	33.333	0.00	0.00	0.00	2.73
3850	10513	7.707104	AGTTTCTCCTTGTCAAAATGTAGTTG	58.293	34.615	0.00	0.00	0.00	3.16
3860	10523	6.183360	TGTCAAAATGTAGTTGAAGTGGCATT	60.183	34.615	0.00	0.00	36.77	3.56
3896	10565	3.821033	CCCCTTATTTATTCTTCAGCGGG	59.179	47.826	0.00	0.00	0.00	6.13
3925	10594	3.746492	GCATTCAACACCGTTTAGTCTCT	59.254	43.478	0.00	0.00	0.00	3.10
3971	10640	2.357517	CCTCACTGTCCGTGTGCC	60.358	66.667	0.00	0.00	44.16	5.01
3992	10661	3.600388	CGGGCCAAGATAAGATATGACC	58.400	50.000	4.39	0.00	0.00	4.02
4013	10698	6.549364	TGACCTTTTTGTTGTATCATGACCTT	59.451	34.615	0.00	0.00	0.00	3.50
4015	10700	7.791029	ACCTTTTTGTTGTATCATGACCTTTT	58.209	30.769	0.00	0.00	0.00	2.27
4039	10724	3.593442	TGGTTGTTCTGGACCAAGATT	57.407	42.857	0.00	0.00	42.68	2.40
4040	10725	4.715534	TGGTTGTTCTGGACCAAGATTA	57.284	40.909	0.00	0.00	42.68	1.75
4041	10726	5.255397	TGGTTGTTCTGGACCAAGATTAT	57.745	39.130	0.00	0.00	42.68	1.28
4042	10727	6.381498	TGGTTGTTCTGGACCAAGATTATA	57.619	37.500	0.00	0.00	42.68	0.98
4043	10728	6.969043	TGGTTGTTCTGGACCAAGATTATAT	58.031	36.000	0.00	0.00	42.68	0.86
4044	10729	8.096621	TGGTTGTTCTGGACCAAGATTATATA	57.903	34.615	0.00	0.00	42.68	0.86
4045	10730	8.723365	TGGTTGTTCTGGACCAAGATTATATAT	58.277	33.333	0.00	0.00	42.68	0.86
4093	10778	7.992180	AAGATGTTTTCTTTAAGCAGTGTTG	57.008	32.000	0.00	0.00	42.15	3.33
4094	10779	7.333528	AGATGTTTTCTTTAAGCAGTGTTGA	57.666	32.000	0.00	0.00	30.09	3.18
4099	10839	8.196771	TGTTTTCTTTAAGCAGTGTTGATTCAT	58.803	29.630	0.00	0.00	34.26	2.57
4100	10840	8.694394	GTTTTCTTTAAGCAGTGTTGATTCATC	58.306	33.333	0.00	0.00	34.26	2.92
4103	10843	8.114331	TCTTTAAGCAGTGTTGATTCATCATT	57.886	30.769	0.98	0.00	36.56	2.57
4105	10845	9.844790	CTTTAAGCAGTGTTGATTCATCATTAA	57.155	29.630	0.98	0.63	36.56	1.40
4109	10849	5.514204	GCAGTGTTGATTCATCATTAACAGC	59.486	40.000	0.98	0.00	40.93	4.40
4111	10851	5.126061	AGTGTTGATTCATCATTAACAGCCC	59.874	40.000	0.98	0.00	40.93	5.19
4132	10872	4.141287	CCTATCCACAAAACAGTGTTGGA	58.859	43.478	15.15	15.15	37.82	3.53
4150	10892	0.603975	GACAGCCACCAACTGACTCC	60.604	60.000	0.00	0.00	38.55	3.85
4160	10902	1.905215	CAACTGACTCCTCATCCTGGT	59.095	52.381	0.00	0.00	0.00	4.00
4166	10908	5.103473	ACTGACTCCTCATCCTGGTAATAGA	60.103	44.000	0.00	0.00	0.00	1.98
4204	10950	4.548868	CTCCAACAACGTGGATCACCAAA	61.549	47.826	0.00	0.00	46.66	3.28
4205	10951	5.816821	CTCCAACAACGTGGATCACCAAAT	61.817	45.833	0.00	0.00	46.66	2.32
4206	10952	7.773213	CTCCAACAACGTGGATCACCAAATG	62.773	48.000	0.00	0.00	46.66	2.32
4212	10958	1.779221	TGGATCACCAAATGGATGGC	58.221	50.000	6.42	0.00	44.75	4.40
4213	10959	1.006878	TGGATCACCAAATGGATGGCA	59.993	47.619	6.42	0.00	44.75	4.92
4214	10960	2.322658	GGATCACCAAATGGATGGCAT	58.677	47.619	6.42	0.00	44.75	4.40
4215	10961	2.298163	GGATCACCAAATGGATGGCATC	59.702	50.000	19.23	19.23	44.75	3.91
4216	10962	2.528673	TCACCAAATGGATGGCATCA	57.471	45.000	27.39	14.68	44.75	3.07
4217	10963	2.101783	TCACCAAATGGATGGCATCAC	58.898	47.619	27.39	17.28	44.75	3.06
4218	10964	1.105457	ACCAAATGGATGGCATCACG	58.895	50.000	27.39	10.98	44.75	4.35
4219	10965	0.386476	CCAAATGGATGGCATCACGG	59.614	55.000	27.39	15.58	37.39	4.94
4220	10966	1.391577	CAAATGGATGGCATCACGGA	58.608	50.000	27.39	9.63	0.00	4.69
4221	10967	1.066002	CAAATGGATGGCATCACGGAC	59.934	52.381	27.39	11.28	0.00	4.79
4222	10968	0.255604	AATGGATGGCATCACGGACA	59.744	50.000	27.39	16.36	0.00	4.02
4223	10969	0.464373	ATGGATGGCATCACGGACAC	60.464	55.000	27.39	9.89	0.00	3.67
4260	11006	4.179579	GAGCGCCGGCCATTCAAC	62.180	66.667	23.46	1.32	41.24	3.18
4266	11012	2.046314	CGGCCATTCAACCGGAGT	60.046	61.111	9.46	0.00	45.74	3.85
4267	11013	2.106683	CGGCCATTCAACCGGAGTC	61.107	63.158	9.46	0.00	45.74	3.36
4268	11014	1.002624	GGCCATTCAACCGGAGTCA	60.003	57.895	9.46	0.00	0.00	3.41
4269	11015	1.026718	GGCCATTCAACCGGAGTCAG	61.027	60.000	9.46	0.00	0.00	3.51
4270	11016	0.036388	GCCATTCAACCGGAGTCAGA	60.036	55.000	9.46	0.00	0.00	3.27
4271	11017	1.610624	GCCATTCAACCGGAGTCAGAA	60.611	52.381	9.46	4.81	0.00	3.02
4272	11018	2.778299	CCATTCAACCGGAGTCAGAAA	58.222	47.619	9.46	0.00	0.00	2.52
4273	11019	3.146066	CCATTCAACCGGAGTCAGAAAA	58.854	45.455	9.46	0.00	0.00	2.29
4274	11020	3.758554	CCATTCAACCGGAGTCAGAAAAT	59.241	43.478	9.46	0.00	0.00	1.82
4275	11021	4.218417	CCATTCAACCGGAGTCAGAAAATT	59.782	41.667	9.46	0.00	0.00	1.82
4276	11022	4.829064	TTCAACCGGAGTCAGAAAATTG	57.171	40.909	9.46	0.00	0.00	2.32
4277	11023	4.079980	TCAACCGGAGTCAGAAAATTGA	57.920	40.909	9.46	0.00	0.00	2.57
4278	11024	4.456535	TCAACCGGAGTCAGAAAATTGAA	58.543	39.130	9.46	0.00	0.00	2.69
4279	11025	4.515191	TCAACCGGAGTCAGAAAATTGAAG	59.485	41.667	9.46	0.00	0.00	3.02
4280	11026	4.351874	ACCGGAGTCAGAAAATTGAAGA	57.648	40.909	9.46	0.00	0.00	2.87
4281	11027	4.319177	ACCGGAGTCAGAAAATTGAAGAG	58.681	43.478	9.46	0.00	0.00	2.85
4282	11028	3.686726	CCGGAGTCAGAAAATTGAAGAGG	59.313	47.826	0.00	0.00	0.00	3.69
4283	11029	4.563580	CCGGAGTCAGAAAATTGAAGAGGA	60.564	45.833	0.00	0.00	0.00	3.71
4284	11030	4.390297	CGGAGTCAGAAAATTGAAGAGGAC	59.610	45.833	0.00	0.00	0.00	3.85
4285	11031	5.308825	GGAGTCAGAAAATTGAAGAGGACA	58.691	41.667	0.00	0.00	0.00	4.02
4286	11032	5.180304	GGAGTCAGAAAATTGAAGAGGACAC	59.820	44.000	0.00	0.00	0.00	3.67
4287	11033	5.934781	AGTCAGAAAATTGAAGAGGACACT	58.065	37.500	0.00	0.00	0.00	3.55
4288	11034	5.762218	AGTCAGAAAATTGAAGAGGACACTG	59.238	40.000	0.00	0.00	0.00	3.66
4289	11035	5.760253	GTCAGAAAATTGAAGAGGACACTGA	59.240	40.000	0.00	0.00	0.00	3.41
4290	11036	6.429385	GTCAGAAAATTGAAGAGGACACTGAT	59.571	38.462	0.00	0.00	34.19	2.90
4291	11037	7.000472	TCAGAAAATTGAAGAGGACACTGATT	59.000	34.615	0.00	0.00	0.00	2.57
4292	11038	7.503566	TCAGAAAATTGAAGAGGACACTGATTT	59.496	33.333	0.00	0.00	0.00	2.17
4293	11039	8.139989	CAGAAAATTGAAGAGGACACTGATTTT	58.860	33.333	0.00	0.00	0.00	1.82
4294	11040	8.355913	AGAAAATTGAAGAGGACACTGATTTTC	58.644	33.333	0.00	0.00	35.65	2.29
4295	11041	7.587037	AAATTGAAGAGGACACTGATTTTCA	57.413	32.000	0.00	0.00	0.00	2.69
4296	11042	7.771927	AATTGAAGAGGACACTGATTTTCAT	57.228	32.000	0.00	0.00	0.00	2.57
4297	11043	7.771927	ATTGAAGAGGACACTGATTTTCATT	57.228	32.000	0.00	0.00	0.00	2.57
4298	11044	6.564709	TGAAGAGGACACTGATTTTCATTG	57.435	37.500	0.00	0.00	33.82	2.82
4299	11045	6.298361	TGAAGAGGACACTGATTTTCATTGA	58.702	36.000	2.36	0.00	32.25	2.57
4300	11046	6.944290	TGAAGAGGACACTGATTTTCATTGAT	59.056	34.615	2.36	0.00	32.25	2.57
4301	11047	7.449395	TGAAGAGGACACTGATTTTCATTGATT	59.551	33.333	2.36	0.00	32.25	2.57
4302	11048	7.771927	AGAGGACACTGATTTTCATTGATTT	57.228	32.000	2.36	0.00	32.25	2.17
4303	11049	7.824672	AGAGGACACTGATTTTCATTGATTTC	58.175	34.615	2.36	0.00	32.25	2.17
4304	11050	7.668886	AGAGGACACTGATTTTCATTGATTTCT	59.331	33.333	2.36	0.32	32.25	2.52
4305	11051	8.186709	AGGACACTGATTTTCATTGATTTCTT	57.813	30.769	2.36	0.00	32.25	2.52
4306	11052	8.086522	AGGACACTGATTTTCATTGATTTCTTG	58.913	33.333	2.36	0.00	32.25	3.02
4307	11053	7.330208	GGACACTGATTTTCATTGATTTCTTGG	59.670	37.037	2.36	0.00	32.25	3.61
4308	11054	7.954835	ACACTGATTTTCATTGATTTCTTGGA	58.045	30.769	2.36	0.00	32.25	3.53
4309	11055	8.423349	ACACTGATTTTCATTGATTTCTTGGAA	58.577	29.630	2.36	0.00	32.25	3.53
4310	11056	9.431887	CACTGATTTTCATTGATTTCTTGGAAT	57.568	29.630	0.00	0.00	29.66	3.01
4340	11086	9.752961	TTTTACATAGCAAAAGGACCTAAAAAC	57.247	29.630	0.00	0.00	0.00	2.43
4341	11087	6.969993	ACATAGCAAAAGGACCTAAAAACA	57.030	33.333	0.00	0.00	0.00	2.83
4342	11088	7.354751	ACATAGCAAAAGGACCTAAAAACAA	57.645	32.000	0.00	0.00	0.00	2.83
4343	11089	7.207383	ACATAGCAAAAGGACCTAAAAACAAC	58.793	34.615	0.00	0.00	0.00	3.32
4344	11090	5.932619	AGCAAAAGGACCTAAAAACAACT	57.067	34.783	0.00	0.00	0.00	3.16
4345	11091	8.573035	CATAGCAAAAGGACCTAAAAACAACTA	58.427	33.333	0.00	0.00	0.00	2.24
4346	11092	7.412853	AGCAAAAGGACCTAAAAACAACTAA	57.587	32.000	0.00	0.00	0.00	2.24
4347	11093	7.842982	AGCAAAAGGACCTAAAAACAACTAAA	58.157	30.769	0.00	0.00	0.00	1.85
4348	11094	8.482943	AGCAAAAGGACCTAAAAACAACTAAAT	58.517	29.630	0.00	0.00	0.00	1.40
4349	11095	8.761497	GCAAAAGGACCTAAAAACAACTAAATC	58.239	33.333	0.00	0.00	0.00	2.17
4350	11096	9.256477	CAAAAGGACCTAAAAACAACTAAATCC	57.744	33.333	0.00	0.00	0.00	3.01
4351	11097	8.777578	AAAGGACCTAAAAACAACTAAATCCT	57.222	30.769	0.00	0.00	34.29	3.24
4352	11098	9.871175	AAAGGACCTAAAAACAACTAAATCCTA	57.129	29.630	0.00	0.00	32.55	2.94
4353	11099	8.859236	AGGACCTAAAAACAACTAAATCCTAC	57.141	34.615	0.00	0.00	31.07	3.18
4354	11100	8.666821	AGGACCTAAAAACAACTAAATCCTACT	58.333	33.333	0.00	0.00	31.07	2.57
4355	11101	8.944029	GGACCTAAAAACAACTAAATCCTACTC	58.056	37.037	0.00	0.00	0.00	2.59
4356	11102	9.722184	GACCTAAAAACAACTAAATCCTACTCT	57.278	33.333	0.00	0.00	0.00	3.24
4364	11110	9.978336	AACAACTAAATCCTACTCTACTCTACT	57.022	33.333	0.00	0.00	0.00	2.57
4365	11111	9.617523	ACAACTAAATCCTACTCTACTCTACTC	57.382	37.037	0.00	0.00	0.00	2.59
4366	11112	9.059260	CAACTAAATCCTACTCTACTCTACTCC	57.941	40.741	0.00	0.00	0.00	3.85
4367	11113	8.571460	ACTAAATCCTACTCTACTCTACTCCT	57.429	38.462	0.00	0.00	0.00	3.69
4368	11114	9.006405	ACTAAATCCTACTCTACTCTACTCCTT	57.994	37.037	0.00	0.00	0.00	3.36
4369	11115	9.498176	CTAAATCCTACTCTACTCTACTCCTTC	57.502	40.741	0.00	0.00	0.00	3.46
4370	11116	5.892524	TCCTACTCTACTCTACTCCTTCC	57.107	47.826	0.00	0.00	0.00	3.46
4371	11117	4.659835	TCCTACTCTACTCTACTCCTTCCC	59.340	50.000	0.00	0.00	0.00	3.97
4372	11118	3.564053	ACTCTACTCTACTCCTTCCCG	57.436	52.381	0.00	0.00	0.00	5.14
4373	11119	2.845586	ACTCTACTCTACTCCTTCCCGT	59.154	50.000	0.00	0.00	0.00	5.28
4374	11120	3.266513	ACTCTACTCTACTCCTTCCCGTT	59.733	47.826	0.00	0.00	0.00	4.44
4375	11121	3.618351	TCTACTCTACTCCTTCCCGTTG	58.382	50.000	0.00	0.00	0.00	4.10
4376	11122	1.558233	ACTCTACTCCTTCCCGTTGG	58.442	55.000	0.00	0.00	0.00	3.77
4377	11123	1.076677	ACTCTACTCCTTCCCGTTGGA	59.923	52.381	0.00	0.00	39.54	3.53
4380	11126	2.269241	CTCCTTCCCGTTGGAGGC	59.731	66.667	0.00	0.00	44.44	4.70
4381	11127	3.665675	CTCCTTCCCGTTGGAGGCG	62.666	68.421	0.00	0.00	44.44	5.52
4399	11145	4.353437	GTCCGGCCTTGTCGTCGT	62.353	66.667	0.00	0.00	0.00	4.34
4400	11146	4.351938	TCCGGCCTTGTCGTCGTG	62.352	66.667	0.00	0.00	0.00	4.35
4401	11147	4.657824	CCGGCCTTGTCGTCGTGT	62.658	66.667	0.00	0.00	0.00	4.49
4402	11148	2.660552	CGGCCTTGTCGTCGTGTT	60.661	61.111	0.00	0.00	0.00	3.32
4403	11149	2.935955	GGCCTTGTCGTCGTGTTG	59.064	61.111	0.00	0.00	0.00	3.33
4404	11150	2.248431	GCCTTGTCGTCGTGTTGC	59.752	61.111	0.00	0.00	0.00	4.17
4405	11151	2.244651	GCCTTGTCGTCGTGTTGCT	61.245	57.895	0.00	0.00	0.00	3.91
4406	11152	1.853319	CCTTGTCGTCGTGTTGCTC	59.147	57.895	0.00	0.00	0.00	4.26
4407	11153	0.874175	CCTTGTCGTCGTGTTGCTCA	60.874	55.000	0.00	0.00	0.00	4.26
4408	11154	0.504384	CTTGTCGTCGTGTTGCTCAG	59.496	55.000	0.00	0.00	0.00	3.35
4409	11155	0.874175	TTGTCGTCGTGTTGCTCAGG	60.874	55.000	0.00	0.00	0.00	3.86
4410	11156	2.355837	TCGTCGTGTTGCTCAGGC	60.356	61.111	0.00	0.00	39.26	4.85
4411	11157	3.767230	CGTCGTGTTGCTCAGGCG	61.767	66.667	0.00	0.00	42.25	5.52
4412	11158	2.661866	GTCGTGTTGCTCAGGCGT	60.662	61.111	0.00	0.00	42.25	5.68
4413	11159	1.372499	GTCGTGTTGCTCAGGCGTA	60.372	57.895	0.00	0.00	42.25	4.42
4414	11160	0.736325	GTCGTGTTGCTCAGGCGTAT	60.736	55.000	0.00	0.00	42.25	3.06
4415	11161	0.457853	TCGTGTTGCTCAGGCGTATC	60.458	55.000	0.00	0.00	42.25	2.24
4416	11162	1.742900	CGTGTTGCTCAGGCGTATCG	61.743	60.000	0.00	0.00	42.25	2.92
4417	11163	0.736325	GTGTTGCTCAGGCGTATCGT	60.736	55.000	0.00	0.00	42.25	3.73
4418	11164	0.457853	TGTTGCTCAGGCGTATCGTC	60.458	55.000	0.00	0.00	42.25	4.20
4419	11165	0.457853	GTTGCTCAGGCGTATCGTCA	60.458	55.000	0.00	0.00	42.25	4.35
4420	11166	0.459899	TTGCTCAGGCGTATCGTCAT	59.540	50.000	0.00	0.00	42.25	3.06
4421	11167	0.030773	TGCTCAGGCGTATCGTCATC	59.969	55.000	0.00	0.00	42.25	2.92
4422	11168	0.664767	GCTCAGGCGTATCGTCATCC	60.665	60.000	0.00	0.00	32.13	3.51
4423	11169	0.955178	CTCAGGCGTATCGTCATCCT	59.045	55.000	0.00	0.00	32.13	3.24
4424	11170	0.952280	TCAGGCGTATCGTCATCCTC	59.048	55.000	0.00	0.00	32.13	3.71
4425	11171	0.039074	CAGGCGTATCGTCATCCTCC	60.039	60.000	0.00	0.00	32.13	4.30
4426	11172	0.467474	AGGCGTATCGTCATCCTCCA	60.467	55.000	0.00	0.00	32.13	3.86
4427	11173	0.318784	GGCGTATCGTCATCCTCCAC	60.319	60.000	0.00	0.00	0.00	4.02
4428	11174	0.669077	GCGTATCGTCATCCTCCACT	59.331	55.000	0.00	0.00	0.00	4.00
4429	11175	1.067212	GCGTATCGTCATCCTCCACTT	59.933	52.381	0.00	0.00	0.00	3.16
4430	11176	2.859032	GCGTATCGTCATCCTCCACTTC	60.859	54.545	0.00	0.00	0.00	3.01
4431	11177	2.287668	CGTATCGTCATCCTCCACTTCC	60.288	54.545	0.00	0.00	0.00	3.46
4432	11178	1.866015	ATCGTCATCCTCCACTTCCA	58.134	50.000	0.00	0.00	0.00	3.53
4433	11179	1.186200	TCGTCATCCTCCACTTCCAG	58.814	55.000	0.00	0.00	0.00	3.86
4434	11180	0.460987	CGTCATCCTCCACTTCCAGC	60.461	60.000	0.00	0.00	0.00	4.85
4435	11181	0.107459	GTCATCCTCCACTTCCAGCC	60.107	60.000	0.00	0.00	0.00	4.85
4436	11182	1.225704	CATCCTCCACTTCCAGCCC	59.774	63.158	0.00	0.00	0.00	5.19
4437	11183	2.003548	ATCCTCCACTTCCAGCCCC	61.004	63.158	0.00	0.00	0.00	5.80
4438	11184	2.498820	ATCCTCCACTTCCAGCCCCT	62.499	60.000	0.00	0.00	0.00	4.79
4439	11185	2.234296	CCTCCACTTCCAGCCCCTT	61.234	63.158	0.00	0.00	0.00	3.95
4440	11186	1.001641	CTCCACTTCCAGCCCCTTG	60.002	63.158	0.00	0.00	0.00	3.61
4441	11187	1.463214	TCCACTTCCAGCCCCTTGA	60.463	57.895	0.00	0.00	0.00	3.02
4442	11188	1.065410	TCCACTTCCAGCCCCTTGAA	61.065	55.000	0.00	0.00	0.00	2.69
4443	11189	0.610232	CCACTTCCAGCCCCTTGAAG	60.610	60.000	4.96	4.96	38.62	3.02
4444	11190	0.401738	CACTTCCAGCCCCTTGAAGA	59.598	55.000	11.57	0.00	35.93	2.87
4445	11191	1.149101	ACTTCCAGCCCCTTGAAGAA	58.851	50.000	11.57	0.00	35.93	2.52
4446	11192	1.202940	ACTTCCAGCCCCTTGAAGAAC	60.203	52.381	11.57	0.00	35.93	3.01
4447	11193	0.112412	TTCCAGCCCCTTGAAGAACC	59.888	55.000	0.00	0.00	0.00	3.62
4448	11194	0.772124	TCCAGCCCCTTGAAGAACCT	60.772	55.000	0.00	0.00	0.00	3.50
4449	11195	0.610232	CCAGCCCCTTGAAGAACCTG	60.610	60.000	0.00	0.00	0.00	4.00
4450	11196	0.111253	CAGCCCCTTGAAGAACCTGT	59.889	55.000	0.00	0.00	0.00	4.00
4451	11197	0.853530	AGCCCCTTGAAGAACCTGTT	59.146	50.000	0.00	0.00	0.00	3.16
4452	11198	0.961753	GCCCCTTGAAGAACCTGTTG	59.038	55.000	0.00	0.00	0.00	3.33
4453	11199	0.961753	CCCCTTGAAGAACCTGTTGC	59.038	55.000	0.00	0.00	0.00	4.17
4454	11200	0.593128	CCCTTGAAGAACCTGTTGCG	59.407	55.000	0.00	0.00	0.00	4.85
4455	11201	0.040067	CCTTGAAGAACCTGTTGCGC	60.040	55.000	0.00	0.00	0.00	6.09
4456	11202	0.947244	CTTGAAGAACCTGTTGCGCT	59.053	50.000	9.73	0.00	0.00	5.92
4457	11203	1.334869	CTTGAAGAACCTGTTGCGCTT	59.665	47.619	9.73	0.00	0.00	4.68
4458	11204	0.944386	TGAAGAACCTGTTGCGCTTC	59.056	50.000	9.73	2.35	36.42	3.86
4459	11205	0.110644	GAAGAACCTGTTGCGCTTCG	60.111	55.000	9.73	0.00	0.00	3.79
4470	11216	3.245315	CGCTTCGCCTCGTTACCG	61.245	66.667	0.00	0.00	0.00	4.02
4471	11217	3.551915	GCTTCGCCTCGTTACCGC	61.552	66.667	0.00	0.00	0.00	5.68
4473	11219	4.781959	TTCGCCTCGTTACCGCGG	62.782	66.667	26.86	26.86	45.74	6.46
4478	11224	4.471726	CTCGTTACCGCGGACGCT	62.472	66.667	35.90	12.54	39.03	5.07
4479	11225	4.465512	TCGTTACCGCGGACGCTC	62.466	66.667	35.90	15.48	39.03	5.03

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
13	14	9.220767	GATTATCCTATTGTTTATCGCCTCTTT	57.779	33.333	0.00	0.00	0.00	2.52
17	18	7.106239	CCTGATTATCCTATTGTTTATCGCCT	58.894	38.462	0.00	0.00	0.00	5.52
41	42	6.687604	AGTCATTATGTTTGCCTTAACAACC	58.312	36.000	0.00	0.00	41.02	3.77
84	86	4.009675	TCATGCCTAAAGCTGATTTTCGT	58.990	39.130	0.00	0.00	44.23	3.85
85	87	4.621068	TCATGCCTAAAGCTGATTTTCG	57.379	40.909	0.00	0.00	44.23	3.46
86	88	9.538508	AATTTATCATGCCTAAAGCTGATTTTC	57.461	29.630	0.00	0.00	44.23	2.29
87	89	9.321562	CAATTTATCATGCCTAAAGCTGATTTT	57.678	29.630	0.00	0.00	44.23	1.82
89	91	8.241497	TCAATTTATCATGCCTAAAGCTGATT	57.759	30.769	0.00	0.00	44.23	2.57
90	92	7.828508	TCAATTTATCATGCCTAAAGCTGAT	57.171	32.000	0.00	0.00	44.23	2.90
91	93	7.122501	TGTTCAATTTATCATGCCTAAAGCTGA	59.877	33.333	0.00	0.66	44.23	4.26
92	94	7.259882	TGTTCAATTTATCATGCCTAAAGCTG	58.740	34.615	0.00	0.00	44.23	4.24
93	95	7.408756	TGTTCAATTTATCATGCCTAAAGCT	57.591	32.000	0.00	0.00	44.23	3.74
94	96	8.652810	AATGTTCAATTTATCATGCCTAAAGC	57.347	30.769	0.00	0.00	44.14	3.51
128	1409	6.629128	TGCCATTCACGATGAACATAATTTT	58.371	32.000	0.00	0.00	39.45	1.82
144	1425	2.030363	CGCCAACTAAACTTGCCATTCA	60.030	45.455	0.00	0.00	0.00	2.57
179	1460	2.480037	CCGGCAAAAAGAAAATGAAGCC	59.520	45.455	0.00	0.00	37.54	4.35
309	1595	8.869109	TCTGATGAGGGTTAAATGAACAAAAAT	58.131	29.630	0.00	0.00	40.09	1.82
343	1634	7.148373	CCACCATTTGATAGGCTTGAAATTTTG	60.148	37.037	0.00	0.00	0.00	2.44
353	1645	3.473113	AAACCCACCATTTGATAGGCT	57.527	42.857	0.00	0.00	0.00	4.58
378	1673	5.679601	ACCAATGGTTGTTTTTGTTAGCAT	58.320	33.333	0.00	0.00	27.29	3.79
383	1678	9.631452	CATTTTAAACCAATGGTTGTTTTTGTT	57.369	25.926	19.48	2.59	46.20	2.83
385	1680	7.756722	TGCATTTTAAACCAATGGTTGTTTTTG	59.243	29.630	19.48	14.30	46.20	2.44
386	1681	7.830739	TGCATTTTAAACCAATGGTTGTTTTT	58.169	26.923	19.48	4.92	46.20	1.94
404	1699	3.959535	ATTCGTGTGGGAATGCATTTT	57.040	38.095	14.33	0.00	35.40	1.82
409	1734	9.691362	AATAAAATAATATTCGTGTGGGAATGC	57.309	29.630	0.00	0.00	37.24	3.56
427	1752	9.469807	AACGTGCTGAATTTGACAAATAAAATA	57.530	25.926	13.69	0.00	0.00	1.40
429	1754	7.763172	AACGTGCTGAATTTGACAAATAAAA	57.237	28.000	13.69	2.55	0.00	1.52
439	1764	8.888332	TGTACATTATAAACGTGCTGAATTTG	57.112	30.769	0.00	0.00	0.00	2.32
667	4327	4.324267	CGAACAACCCCTTAGATCAACTT	58.676	43.478	0.00	0.00	0.00	2.66
676	4336	3.183801	AGGATTACCGAACAACCCCTTA	58.816	45.455	0.00	0.00	41.83	2.69
677	4337	1.990327	AGGATTACCGAACAACCCCTT	59.010	47.619	0.00	0.00	41.83	3.95
678	4338	1.558294	GAGGATTACCGAACAACCCCT	59.442	52.381	0.00	0.00	41.83	4.79
679	4339	1.407851	GGAGGATTACCGAACAACCCC	60.408	57.143	0.00	0.00	41.83	4.95
680	4340	1.407851	GGGAGGATTACCGAACAACCC	60.408	57.143	0.00	0.00	41.83	4.11
681	4341	1.279846	TGGGAGGATTACCGAACAACC	59.720	52.381	0.00	0.00	41.83	3.77
682	4342	2.027469	AGTGGGAGGATTACCGAACAAC	60.027	50.000	0.00	0.00	41.83	3.32
683	4343	2.235402	GAGTGGGAGGATTACCGAACAA	59.765	50.000	0.00	0.00	41.83	2.83
684	4344	1.829222	GAGTGGGAGGATTACCGAACA	59.171	52.381	0.00	0.00	41.83	3.18
685	4345	1.138464	GGAGTGGGAGGATTACCGAAC	59.862	57.143	0.00	0.00	41.83	3.95
686	4346	1.492764	GGAGTGGGAGGATTACCGAA	58.507	55.000	0.00	0.00	41.83	4.30
687	4347	0.754217	CGGAGTGGGAGGATTACCGA	60.754	60.000	0.00	0.00	41.09	4.69
688	4348	1.041447	ACGGAGTGGGAGGATTACCG	61.041	60.000	0.00	0.00	42.51	4.02
689	4349	2.912020	ACGGAGTGGGAGGATTACC	58.088	57.895	0.00	0.00	42.51	2.85
698	4358	8.897891	CAGATCCTGATATTTCACGGAGTGGG	62.898	50.000	0.02	0.00	46.58	4.61
699	4359	6.024049	CAGATCCTGATATTTCACGGAGTGG	61.024	48.000	0.02	0.00	46.58	4.00
701	4361	4.502259	GCAGATCCTGATATTTCACGGAGT	60.502	45.833	0.00	0.37	35.06	3.85
702	4362	3.993081	GCAGATCCTGATATTTCACGGAG	59.007	47.826	0.00	0.00	34.66	4.63
703	4363	3.552890	CGCAGATCCTGATATTTCACGGA	60.553	47.826	0.00	6.75	35.23	4.69
704	4364	2.733552	CGCAGATCCTGATATTTCACGG	59.266	50.000	0.00	0.00	32.44	4.94
705	4365	2.733552	CCGCAGATCCTGATATTTCACG	59.266	50.000	0.00	0.00	32.44	4.35
706	4366	3.993081	CTCCGCAGATCCTGATATTTCAC	59.007	47.826	0.00	0.00	32.44	3.18
707	4367	3.555795	GCTCCGCAGATCCTGATATTTCA	60.556	47.826	0.00	0.00	32.44	2.69
708	4368	2.999355	GCTCCGCAGATCCTGATATTTC	59.001	50.000	0.00	0.00	32.44	2.17
709	4369	2.611473	CGCTCCGCAGATCCTGATATTT	60.611	50.000	0.00	0.00	32.44	1.40
710	4370	1.067283	CGCTCCGCAGATCCTGATATT	60.067	52.381	0.00	0.00	32.44	1.28
711	4371	0.529833	CGCTCCGCAGATCCTGATAT	59.470	55.000	0.00	0.00	32.44	1.63
712	4372	1.959848	CGCTCCGCAGATCCTGATA	59.040	57.895	0.00	0.00	32.44	2.15
713	4373	2.733301	CGCTCCGCAGATCCTGAT	59.267	61.111	0.00	0.00	32.44	2.90
739	4399	1.377987	TTCAAAATCGCGGAGGGGG	60.378	57.895	6.13	0.00	42.39	5.40
740	4400	0.676782	AGTTCAAAATCGCGGAGGGG	60.677	55.000	6.13	0.00	42.39	4.79
741	4401	0.447801	CAGTTCAAAATCGCGGAGGG	59.552	55.000	6.13	0.00	44.04	4.30
742	4402	0.179189	GCAGTTCAAAATCGCGGAGG	60.179	55.000	6.13	0.00	0.00	4.30
743	4403	0.179189	GGCAGTTCAAAATCGCGGAG	60.179	55.000	6.13	0.00	0.00	4.63
744	4404	1.873165	GGCAGTTCAAAATCGCGGA	59.127	52.632	6.13	0.00	0.00	5.54
745	4405	1.511887	CGGCAGTTCAAAATCGCGG	60.512	57.895	6.13	0.00	0.00	6.46
746	4406	2.145905	GCGGCAGTTCAAAATCGCG	61.146	57.895	0.00	0.00	34.08	5.87
747	4407	0.794605	GAGCGGCAGTTCAAAATCGC	60.795	55.000	1.45	0.00	42.91	4.58
748	4408	0.179189	GGAGCGGCAGTTCAAAATCG	60.179	55.000	1.45	0.00	0.00	3.34
749	4409	1.131315	GAGGAGCGGCAGTTCAAAATC	59.869	52.381	1.45	0.00	0.00	2.17
750	4410	1.168714	GAGGAGCGGCAGTTCAAAAT	58.831	50.000	1.45	0.00	0.00	1.82
751	4411	0.889186	GGAGGAGCGGCAGTTCAAAA	60.889	55.000	1.45	0.00	0.00	2.44
752	4412	1.302511	GGAGGAGCGGCAGTTCAAA	60.303	57.895	1.45	0.00	0.00	2.69
753	4413	2.347490	GGAGGAGCGGCAGTTCAA	59.653	61.111	1.45	0.00	0.00	2.69
754	4414	2.922503	TGGAGGAGCGGCAGTTCA	60.923	61.111	1.45	0.00	0.00	3.18
755	4415	2.125350	CTGGAGGAGCGGCAGTTC	60.125	66.667	1.45	0.00	0.00	3.01
756	4416	4.400961	GCTGGAGGAGCGGCAGTT	62.401	66.667	1.45	0.00	38.15	3.16
764	4424	2.837291	CTCCCGGAGCTGGAGGAG	60.837	72.222	0.73	8.97	44.73	3.69
776	4436	3.649277	CTCCACAACTCCGCTCCCG	62.649	68.421	0.00	0.00	0.00	5.14
777	4437	2.232298	CTCTCCACAACTCCGCTCCC	62.232	65.000	0.00	0.00	0.00	4.30
778	4438	1.216710	CTCTCCACAACTCCGCTCC	59.783	63.158	0.00	0.00	0.00	4.70
779	4439	1.216710	CCTCTCCACAACTCCGCTC	59.783	63.158	0.00	0.00	0.00	5.03
780	4440	1.228894	TCCTCTCCACAACTCCGCT	60.229	57.895	0.00	0.00	0.00	5.52
781	4441	1.216710	CTCCTCTCCACAACTCCGC	59.783	63.158	0.00	0.00	0.00	5.54
782	4442	1.608717	CCCTCCTCTCCACAACTCCG	61.609	65.000	0.00	0.00	0.00	4.63
783	4443	0.252284	TCCCTCCTCTCCACAACTCC	60.252	60.000	0.00	0.00	0.00	3.85
784	4444	1.645710	TTCCCTCCTCTCCACAACTC	58.354	55.000	0.00	0.00	0.00	3.01
785	4445	2.192263	GATTCCCTCCTCTCCACAACT	58.808	52.381	0.00	0.00	0.00	3.16
786	4446	1.210722	GGATTCCCTCCTCTCCACAAC	59.789	57.143	0.00	0.00	41.29	3.32
787	4447	1.584724	GGATTCCCTCCTCTCCACAA	58.415	55.000	0.00	0.00	41.29	3.33
788	4448	0.687757	CGGATTCCCTCCTCTCCACA	60.688	60.000	0.00	0.00	42.47	4.17
789	4449	0.397254	TCGGATTCCCTCCTCTCCAC	60.397	60.000	0.00	0.00	42.47	4.02
790	4450	0.338467	TTCGGATTCCCTCCTCTCCA	59.662	55.000	0.00	0.00	42.47	3.86
791	4451	0.753867	GTTCGGATTCCCTCCTCTCC	59.246	60.000	0.00	0.00	42.47	3.71
792	4452	0.386113	CGTTCGGATTCCCTCCTCTC	59.614	60.000	0.00	0.00	42.47	3.20
793	4453	1.043673	CCGTTCGGATTCCCTCCTCT	61.044	60.000	5.19	0.00	42.47	3.69
794	4454	1.442148	CCGTTCGGATTCCCTCCTC	59.558	63.158	5.19	0.00	42.47	3.71
795	4455	2.064581	CCCGTTCGGATTCCCTCCT	61.065	63.158	13.08	0.00	42.47	3.69
796	4456	2.504519	CCCGTTCGGATTCCCTCC	59.495	66.667	13.08	0.00	41.07	4.30
797	4457	2.203029	GCCCGTTCGGATTCCCTC	60.203	66.667	13.08	0.00	0.00	4.30
798	4458	3.793888	GGCCCGTTCGGATTCCCT	61.794	66.667	13.08	0.00	0.00	4.20
799	4459	1.974973	TAAGGCCCGTTCGGATTCCC	61.975	60.000	13.08	7.32	0.00	3.97
800	4460	0.107557	TTAAGGCCCGTTCGGATTCC	60.108	55.000	13.08	10.23	0.00	3.01
801	4461	1.296727	CTTAAGGCCCGTTCGGATTC	58.703	55.000	13.08	2.11	0.00	2.52
802	4462	0.616891	ACTTAAGGCCCGTTCGGATT	59.383	50.000	13.08	7.09	0.00	3.01
803	4463	0.107848	CACTTAAGGCCCGTTCGGAT	60.108	55.000	13.08	0.00	0.00	4.18
804	4464	1.294138	CACTTAAGGCCCGTTCGGA	59.706	57.895	13.08	0.00	0.00	4.55
805	4465	1.004200	ACACTTAAGGCCCGTTCGG	60.004	57.895	7.53	4.08	0.00	4.30
806	4466	0.320073	TGACACTTAAGGCCCGTTCG	60.320	55.000	7.53	0.00	0.00	3.95
807	4467	1.154197	GTGACACTTAAGGCCCGTTC	58.846	55.000	7.53	0.00	0.00	3.95
808	4468	0.250597	GGTGACACTTAAGGCCCGTT	60.251	55.000	7.53	0.00	0.00	4.44
809	4469	1.125711	AGGTGACACTTAAGGCCCGT	61.126	55.000	7.53	0.00	0.00	5.28
810	4470	0.036306	AAGGTGACACTTAAGGCCCG	59.964	55.000	7.53	0.00	0.00	6.13
811	4471	2.287977	AAAGGTGACACTTAAGGCCC	57.712	50.000	7.53	0.00	0.00	5.80
812	4472	3.219281	TCAAAAGGTGACACTTAAGGCC	58.781	45.455	7.53	0.00	0.00	5.19
813	4473	4.762251	AGATCAAAAGGTGACACTTAAGGC	59.238	41.667	7.53	0.00	39.72	4.35
814	4474	5.765182	ACAGATCAAAAGGTGACACTTAAGG	59.235	40.000	7.53	0.00	39.72	2.69
815	4475	6.867662	ACAGATCAAAAGGTGACACTTAAG	57.132	37.500	5.39	0.00	39.72	1.85
816	4476	7.041372	GCTAACAGATCAAAAGGTGACACTTAA	60.041	37.037	5.39	0.00	39.72	1.85
820	4480	4.515191	TGCTAACAGATCAAAAGGTGACAC	59.485	41.667	0.00	0.00	39.72	3.67
840	4500	2.587753	CGTGGTGTGTCCGTTGCT	60.588	61.111	0.00	0.00	39.52	3.91
841	4501	2.586635	TCGTGGTGTGTCCGTTGC	60.587	61.111	0.00	0.00	39.52	4.17
843	4503	2.278989	CGTCGTGGTGTGTCCGTT	60.279	61.111	0.00	0.00	39.52	4.44
897	4569	3.801068	TTTTCTGTGGGGGCGGTGG	62.801	63.158	0.00	0.00	0.00	4.61
898	4570	2.203422	TTTTCTGTGGGGGCGGTG	60.203	61.111	0.00	0.00	0.00	4.94
899	4571	2.115266	CTTTTCTGTGGGGGCGGT	59.885	61.111	0.00	0.00	0.00	5.68
900	4572	1.524008	GAACTTTTCTGTGGGGGCGG	61.524	60.000	0.00	0.00	0.00	6.13
901	4573	0.821711	TGAACTTTTCTGTGGGGGCG	60.822	55.000	0.00	0.00	0.00	6.13
902	4574	1.408969	TTGAACTTTTCTGTGGGGGC	58.591	50.000	0.00	0.00	0.00	5.80
903	4575	2.224042	GCTTTGAACTTTTCTGTGGGGG	60.224	50.000	0.00	0.00	0.00	5.40
904	4576	2.224042	GGCTTTGAACTTTTCTGTGGGG	60.224	50.000	0.00	0.00	0.00	4.96
905	4577	2.224042	GGGCTTTGAACTTTTCTGTGGG	60.224	50.000	0.00	0.00	0.00	4.61
1052	5659	2.050934	GCCGTCGGGAAGTAGAGGT	61.051	63.158	14.38	0.00	34.06	3.85
1110	5717	4.742649	AGGAGGTCGAGGAGCGCA	62.743	66.667	11.47	0.00	40.61	6.09
1202	5809	1.642037	CTCGTAGTCGTTCCGGAGCA	61.642	60.000	19.03	2.77	38.33	4.26
1210	5817	1.605738	AGCCCACCTCGTAGTCGTT	60.606	57.895	0.00	0.00	38.33	3.85
1575	6182	0.933700	CCTCCTCCTCCTCTTCCTCT	59.066	60.000	0.00	0.00	0.00	3.69
1576	6183	0.930726	TCCTCCTCCTCCTCTTCCTC	59.069	60.000	0.00	0.00	0.00	3.71
1577	6184	0.933700	CTCCTCCTCCTCCTCTTCCT	59.066	60.000	0.00	0.00	0.00	3.36
1578	6185	0.105709	CCTCCTCCTCCTCCTCTTCC	60.106	65.000	0.00	0.00	0.00	3.46
1579	6186	0.930726	TCCTCCTCCTCCTCCTCTTC	59.069	60.000	0.00	0.00	0.00	2.87
1580	6187	1.290732	CTTCCTCCTCCTCCTCCTCTT	59.709	57.143	0.00	0.00	0.00	2.85
1581	6188	0.933700	CTTCCTCCTCCTCCTCCTCT	59.066	60.000	0.00	0.00	0.00	3.69
1638	6257	1.412710	GTGTTCTCCTCCATGCCGATA	59.587	52.381	0.00	0.00	0.00	2.92
1689	6320	6.877611	AGCTAGAACATAGAGAGAGTAAGC	57.122	41.667	0.00	0.00	0.00	3.09
1700	6331	6.674694	AAGCACAATCAAGCTAGAACATAG	57.325	37.500	0.00	0.00	40.90	2.23
1701	6332	8.737168	ATTAAGCACAATCAAGCTAGAACATA	57.263	30.769	0.00	0.00	40.90	2.29
1709	6340	7.383300	GTCAAAGAAATTAAGCACAATCAAGCT	59.617	33.333	0.00	0.00	44.31	3.74
1752	6409	5.363101	ACATCGCTTCAATGTATCAGTCAT	58.637	37.500	0.00	0.00	35.62	3.06
1756	6413	6.643845	CAACTACATCGCTTCAATGTATCAG	58.356	40.000	0.00	0.00	38.54	2.90
1941	7343	4.874396	ACCTCTGTAACTTAATTAAGGCGC	59.126	41.667	25.25	15.72	37.62	6.53
1994	7400	9.669353	CATTTACTGGATTTGATGTAATACAGC	57.331	33.333	1.14	1.14	46.17	4.40
2172	7615	3.173599	CAATGCCATACAAAGAACGCAG	58.826	45.455	0.00	0.00	0.00	5.18
2240	7685	3.447944	CCTAGTTTCTTAGAGCGGGTCTT	59.552	47.826	15.66	0.00	36.64	3.01
2323	7891	5.228945	ACATGGTGCCATAGTAATCCTAC	57.771	43.478	3.07	0.00	34.91	3.18
2387	7960	2.268920	GCGAATGAGGGCTCACCA	59.731	61.111	0.00	0.00	43.11	4.17
2392	7965	0.257039	AGATTTGGCGAATGAGGGCT	59.743	50.000	4.28	0.00	0.00	5.19
2407	9025	1.251251	GGGCAGTGCACTCAAAGATT	58.749	50.000	18.64	0.00	0.00	2.40
2499	9118	4.471025	TCTGAGAATCCAGTCCTATTGCAA	59.529	41.667	0.00	0.00	35.71	4.08
2554	9181	3.544698	AGGGTGAAGAGTAGGACTTGA	57.455	47.619	0.00	0.00	0.00	3.02
2564	9191	6.595716	CCACTTATCTTACAAAGGGTGAAGAG	59.404	42.308	0.00	0.00	31.35	2.85
2596	9225	2.041265	AGTCCCGATCTTGGCCCT	59.959	61.111	0.00	0.00	0.00	5.19
2605	9234	1.319541	CGTATGACCAGAGTCCCGAT	58.680	55.000	0.00	0.00	42.81	4.18
2676	9305	5.163561	CCCGGTTACAAATGTTTCAGCATAT	60.164	40.000	0.00	0.00	0.00	1.78
2678	9307	3.056891	CCCGGTTACAAATGTTTCAGCAT	60.057	43.478	0.00	0.00	0.00	3.79
2752	9388	7.399523	CCGACAATAAAATACTGCAGAGTAAC	58.600	38.462	23.35	0.00	38.21	2.50
2753	9389	6.036735	GCCGACAATAAAATACTGCAGAGTAA	59.963	38.462	23.35	2.81	38.21	2.24
2754	9390	5.522460	GCCGACAATAAAATACTGCAGAGTA	59.478	40.000	23.35	4.18	39.07	2.59
2813	9450	6.560253	AATGTACAGTCAAAATGTGAGGTC	57.440	37.500	0.33	0.00	36.74	3.85
2846	9483	7.277098	GGTTTTACTTTCAACTTGTTTCTTCCC	59.723	37.037	0.00	0.00	0.00	3.97
2883	9520	6.863275	TGCATCTGTTCTAGTCGAGAAATTA	58.137	36.000	0.00	0.00	45.90	1.40
2884	9521	5.724328	TGCATCTGTTCTAGTCGAGAAATT	58.276	37.500	0.00	0.00	45.90	1.82
2885	9522	5.330455	TGCATCTGTTCTAGTCGAGAAAT	57.670	39.130	0.00	0.00	45.90	2.17
2886	9523	4.783764	TGCATCTGTTCTAGTCGAGAAA	57.216	40.909	0.00	0.00	45.90	2.52
2891	9529	8.430828	CAATATGTTATGCATCTGTTCTAGTCG	58.569	37.037	0.19	0.00	38.94	4.18
2909	9547	4.635765	CCGACACAGTTGGATCAATATGTT	59.364	41.667	0.00	0.00	39.36	2.71
2915	9553	1.140052	ACACCGACACAGTTGGATCAA	59.860	47.619	10.33	0.00	39.36	2.57
2918	9556	0.756294	TGACACCGACACAGTTGGAT	59.244	50.000	10.33	0.00	39.36	3.41
2919	9557	0.537653	TTGACACCGACACAGTTGGA	59.462	50.000	10.33	0.00	39.36	3.53
2942	9580	1.372997	CGCACACCAGCTCTACGTT	60.373	57.895	0.00	0.00	0.00	3.99
2944	9582	2.507102	CCGCACACCAGCTCTACG	60.507	66.667	0.00	0.00	0.00	3.51
2954	9592	2.226437	ACATTGTCATTTCTCCGCACAC	59.774	45.455	0.00	0.00	0.00	3.82
2958	9596	4.391830	TGAACTACATTGTCATTTCTCCGC	59.608	41.667	0.00	0.00	0.00	5.54
2974	9612	4.962155	AGCATATTGGCCTACTGAACTAC	58.038	43.478	3.32	0.00	0.00	2.73
2983	9621	2.826128	CCGAGTCTAGCATATTGGCCTA	59.174	50.000	3.32	0.00	0.00	3.93
3009	9647	3.792401	TGAAAGATACACACGCCATAGG	58.208	45.455	0.00	0.00	0.00	2.57
3013	9651	2.831685	ACTGAAAGATACACACGCCA	57.168	45.000	0.00	0.00	37.43	5.69
3017	9655	5.164080	GCGACAGTAACTGAAAGATACACAC	60.164	44.000	0.00	0.00	43.83	3.82
3018	9656	4.921515	GCGACAGTAACTGAAAGATACACA	59.078	41.667	0.00	0.00	43.83	3.72
3019	9657	5.162075	AGCGACAGTAACTGAAAGATACAC	58.838	41.667	0.00	0.00	43.83	2.90
3020	9658	5.386958	AGCGACAGTAACTGAAAGATACA	57.613	39.130	0.00	0.00	43.83	2.29
3050	9688	3.113979	GCAAATGCCGCAAGTGCC	61.114	61.111	16.94	3.83	37.91	5.01
3072	9710	7.940850	TGGTTTTTCTCTTCAGTCAAATAAGG	58.059	34.615	0.00	0.00	0.00	2.69
3197	9838	8.669243	GGTTAGGAAGAAAGTGAACATCTAATG	58.331	37.037	0.00	0.00	0.00	1.90
3210	9851	2.354805	CGACCAGGGGTTAGGAAGAAAG	60.355	54.545	0.00	0.00	35.25	2.62
3330	9971	1.066286	GTGAACTGCTCCAGCTGATCT	60.066	52.381	17.39	0.00	40.56	2.75
3372	10013	2.636412	CGAGTCTTGGCCCGACAGA	61.636	63.158	20.47	6.08	33.89	3.41
3378	10019	3.706373	TGCTCCGAGTCTTGGCCC	61.706	66.667	0.00	0.00	0.00	5.80
3505	10146	1.344763	AGCAGCAGACTACCGAGTTTT	59.655	47.619	0.00	0.00	35.45	2.43
3508	10149	2.060050	ATAGCAGCAGACTACCGAGT	57.940	50.000	0.00	0.00	39.20	4.18
3509	10150	3.444703	AAATAGCAGCAGACTACCGAG	57.555	47.619	0.00	0.00	0.00	4.63
3510	10151	4.401519	ACTTAAATAGCAGCAGACTACCGA	59.598	41.667	0.00	0.00	0.00	4.69
3511	10152	4.683832	ACTTAAATAGCAGCAGACTACCG	58.316	43.478	0.00	0.00	0.00	4.02
3512	10153	5.220681	GCAACTTAAATAGCAGCAGACTACC	60.221	44.000	0.00	0.00	0.00	3.18
3566	10211	4.041691	ACAAACAGCACTACAGGGTCTATT	59.958	41.667	0.00	0.00	0.00	1.73
3567	10212	3.583086	ACAAACAGCACTACAGGGTCTAT	59.417	43.478	0.00	0.00	0.00	1.98
3568	10213	2.969950	ACAAACAGCACTACAGGGTCTA	59.030	45.455	0.00	0.00	0.00	2.59
3582	10227	2.967459	TACATGCTGCGAACAAACAG	57.033	45.000	0.00	0.00	36.96	3.16
3606	10251	1.075542	ACATACACGGTTGCGTCATG	58.924	50.000	0.00	0.00	0.00	3.07
3611	10256	0.110419	CCAACACATACACGGTTGCG	60.110	55.000	0.00	0.00	40.32	4.85
3679	10325	6.202202	ACTGCCTGATACTAGTATACCTCA	57.798	41.667	15.42	9.24	0.00	3.86
3680	10326	6.824704	CCTACTGCCTGATACTAGTATACCTC	59.175	46.154	15.42	4.93	0.00	3.85
3686	10335	4.726035	AGCCTACTGCCTGATACTAGTA	57.274	45.455	4.77	4.77	42.71	1.82
3687	10336	3.603965	AGCCTACTGCCTGATACTAGT	57.396	47.619	0.00	0.00	42.71	2.57
3688	10337	5.126384	GGATTAGCCTACTGCCTGATACTAG	59.874	48.000	0.00	0.00	42.71	2.57
3712	10361	1.394917	GCAGCAACATAGAACCAGACG	59.605	52.381	0.00	0.00	0.00	4.18
3731	10383	2.311124	ACACCAGCTCTATAAACGGC	57.689	50.000	0.00	0.00	0.00	5.68
3848	10511	4.751767	AAAAGGTCAAATGCCACTTCAA	57.248	36.364	0.00	0.00	0.00	2.69
3873	10541	3.821033	CCGCTGAAGAATAAATAAGGGGG	59.179	47.826	0.00	0.00	34.92	5.40
3875	10543	3.253432	GCCCGCTGAAGAATAAATAAGGG	59.747	47.826	0.00	0.00	38.18	3.95
3896	10565	1.154150	GGTGTTGAATGCTCTGCGC	60.154	57.895	0.00	0.00	39.77	6.09
3971	10640	3.261897	AGGTCATATCTTATCTTGGCCCG	59.738	47.826	0.00	0.00	34.33	6.13
3974	10643	8.000780	ACAAAAAGGTCATATCTTATCTTGGC	57.999	34.615	0.00	0.00	0.00	4.52
3992	10661	9.311916	TCAAAAAGGTCATGATACAACAAAAAG	57.688	29.630	0.00	0.00	0.00	2.27
4013	10698	3.636679	TGGTCCAGAACAACCATCAAAA	58.363	40.909	0.00	0.00	40.60	2.44
4015	10700	3.117701	TCTTGGTCCAGAACAACCATCAA	60.118	43.478	0.00	0.00	44.72	2.57
4073	10758	7.542890	TGAATCAACACTGCTTAAAGAAAACA	58.457	30.769	0.00	0.00	0.00	2.83
4076	10761	7.939782	TGATGAATCAACACTGCTTAAAGAAA	58.060	30.769	0.00	0.00	33.08	2.52
4077	10762	7.509141	TGATGAATCAACACTGCTTAAAGAA	57.491	32.000	0.00	0.00	33.08	2.52
4078	10763	7.692460	ATGATGAATCAACACTGCTTAAAGA	57.308	32.000	0.00	0.00	40.69	2.52
4079	10764	9.844790	TTAATGATGAATCAACACTGCTTAAAG	57.155	29.630	0.00	0.00	40.69	1.85
4081	10766	8.791675	TGTTAATGATGAATCAACACTGCTTAA	58.208	29.630	0.00	0.00	40.69	1.85
4083	10768	7.218228	TGTTAATGATGAATCAACACTGCTT	57.782	32.000	0.00	0.00	40.69	3.91
4084	10769	6.624423	GCTGTTAATGATGAATCAACACTGCT	60.624	38.462	16.24	0.00	40.69	4.24
4085	10770	5.514204	GCTGTTAATGATGAATCAACACTGC	59.486	40.000	0.00	6.55	40.69	4.40
4086	10771	6.032094	GGCTGTTAATGATGAATCAACACTG	58.968	40.000	0.00	1.11	40.69	3.66
4087	10772	5.126061	GGGCTGTTAATGATGAATCAACACT	59.874	40.000	0.00	0.00	40.69	3.55
4088	10773	5.126061	AGGGCTGTTAATGATGAATCAACAC	59.874	40.000	0.00	0.00	40.69	3.32
4091	10776	6.716628	GGATAGGGCTGTTAATGATGAATCAA	59.283	38.462	0.00	0.00	40.69	2.57
4092	10777	6.183361	TGGATAGGGCTGTTAATGATGAATCA	60.183	38.462	0.00	0.00	41.70	2.57
4093	10778	6.150140	GTGGATAGGGCTGTTAATGATGAATC	59.850	42.308	0.00	0.00	0.00	2.52
4094	10779	6.006449	GTGGATAGGGCTGTTAATGATGAAT	58.994	40.000	0.00	0.00	0.00	2.57
4099	10839	4.853468	TTGTGGATAGGGCTGTTAATGA	57.147	40.909	0.00	0.00	0.00	2.57
4100	10840	5.184864	TGTTTTGTGGATAGGGCTGTTAATG	59.815	40.000	0.00	0.00	0.00	1.90
4103	10843	4.202524	ACTGTTTTGTGGATAGGGCTGTTA	60.203	41.667	0.00	0.00	0.00	2.41
4105	10845	2.108250	ACTGTTTTGTGGATAGGGCTGT	59.892	45.455	0.00	0.00	0.00	4.40
4109	10849	3.255642	CCAACACTGTTTTGTGGATAGGG	59.744	47.826	6.00	0.00	41.84	3.53
4111	10851	4.578516	TGTCCAACACTGTTTTGTGGATAG	59.421	41.667	6.00	0.00	41.84	2.08
4132	10872	1.056700	AGGAGTCAGTTGGTGGCTGT	61.057	55.000	0.00	0.00	43.00	4.40
4150	10892	8.712285	TTACGTTTTTCTATTACCAGGATGAG	57.288	34.615	0.00	0.00	39.69	2.90
4160	10902	6.372381	GGAGTTGCCCTTACGTTTTTCTATTA	59.628	38.462	0.00	0.00	0.00	0.98
4166	10908	2.657143	TGGAGTTGCCCTTACGTTTTT	58.343	42.857	0.00	0.00	34.97	1.94
4204	10950	0.464373	GTGTCCGTGATGCCATCCAT	60.464	55.000	1.49	0.00	36.70	3.41
4205	10951	1.078497	GTGTCCGTGATGCCATCCA	60.078	57.895	1.49	0.00	0.00	3.41
4206	10952	2.173669	CGTGTCCGTGATGCCATCC	61.174	63.158	1.49	0.00	0.00	3.51
4207	10953	3.398920	CGTGTCCGTGATGCCATC	58.601	61.111	0.00	0.00	0.00	3.51
4229	10975	3.112709	GCTCCGCTTGGACACGTC	61.113	66.667	0.00	0.00	36.65	4.34
4243	10989	4.179579	GTTGAATGGCCGGCGCTC	62.180	66.667	22.54	16.75	34.44	5.03
4249	10995	2.046314	ACTCCGGTTGAATGGCCG	60.046	61.111	0.00	0.00	46.80	6.13
4250	10996	1.002624	TGACTCCGGTTGAATGGCC	60.003	57.895	0.00	0.00	0.00	5.36
4251	10997	0.036388	TCTGACTCCGGTTGAATGGC	60.036	55.000	0.00	0.00	0.00	4.40
4252	10998	2.472695	TTCTGACTCCGGTTGAATGG	57.527	50.000	0.00	0.00	0.00	3.16
4253	10999	5.048782	TCAATTTTCTGACTCCGGTTGAATG	60.049	40.000	0.00	0.00	0.00	2.67
4254	11000	5.070001	TCAATTTTCTGACTCCGGTTGAAT	58.930	37.500	0.00	0.00	0.00	2.57
4255	11001	4.456535	TCAATTTTCTGACTCCGGTTGAA	58.543	39.130	0.00	0.00	0.00	2.69
4256	11002	4.079980	TCAATTTTCTGACTCCGGTTGA	57.920	40.909	0.00	0.00	0.00	3.18
4257	11003	4.515191	TCTTCAATTTTCTGACTCCGGTTG	59.485	41.667	0.00	0.00	0.00	3.77
4258	11004	4.714632	TCTTCAATTTTCTGACTCCGGTT	58.285	39.130	0.00	0.00	0.00	4.44
4259	11005	4.319177	CTCTTCAATTTTCTGACTCCGGT	58.681	43.478	0.00	0.00	0.00	5.28
4260	11006	3.686726	CCTCTTCAATTTTCTGACTCCGG	59.313	47.826	0.00	0.00	0.00	5.14
4261	11007	4.390297	GTCCTCTTCAATTTTCTGACTCCG	59.610	45.833	0.00	0.00	0.00	4.63
4262	11008	5.180304	GTGTCCTCTTCAATTTTCTGACTCC	59.820	44.000	0.00	0.00	0.00	3.85
4263	11009	5.994668	AGTGTCCTCTTCAATTTTCTGACTC	59.005	40.000	0.00	0.00	0.00	3.36
4264	11010	5.762218	CAGTGTCCTCTTCAATTTTCTGACT	59.238	40.000	0.00	0.00	0.00	3.41
4265	11011	5.760253	TCAGTGTCCTCTTCAATTTTCTGAC	59.240	40.000	0.00	0.00	0.00	3.51
4266	11012	5.928976	TCAGTGTCCTCTTCAATTTTCTGA	58.071	37.500	0.00	0.00	0.00	3.27
4267	11013	6.814506	ATCAGTGTCCTCTTCAATTTTCTG	57.185	37.500	0.00	0.00	0.00	3.02
4268	11014	7.830099	AAATCAGTGTCCTCTTCAATTTTCT	57.170	32.000	0.00	0.00	0.00	2.52
4269	11015	8.137437	TGAAAATCAGTGTCCTCTTCAATTTTC	58.863	33.333	11.22	11.22	40.06	2.29
4270	11016	8.010733	TGAAAATCAGTGTCCTCTTCAATTTT	57.989	30.769	0.00	0.00	0.00	1.82
4271	11017	7.587037	TGAAAATCAGTGTCCTCTTCAATTT	57.413	32.000	0.00	0.00	0.00	1.82
4272	11018	7.771927	ATGAAAATCAGTGTCCTCTTCAATT	57.228	32.000	0.00	0.00	0.00	2.32
4273	11019	7.449395	TCAATGAAAATCAGTGTCCTCTTCAAT	59.551	33.333	7.56	0.00	42.45	2.57
4274	11020	6.772233	TCAATGAAAATCAGTGTCCTCTTCAA	59.228	34.615	7.56	0.00	42.45	2.69
4275	11021	6.298361	TCAATGAAAATCAGTGTCCTCTTCA	58.702	36.000	7.56	0.00	42.45	3.02
4276	11022	6.808008	TCAATGAAAATCAGTGTCCTCTTC	57.192	37.500	7.56	0.00	42.45	2.87
4277	11023	7.771927	AATCAATGAAAATCAGTGTCCTCTT	57.228	32.000	7.56	0.00	42.45	2.85
4278	11024	7.668886	AGAAATCAATGAAAATCAGTGTCCTCT	59.331	33.333	7.56	5.49	42.45	3.69
4279	11025	7.824672	AGAAATCAATGAAAATCAGTGTCCTC	58.175	34.615	7.56	3.70	42.45	3.71
4280	11026	7.771927	AGAAATCAATGAAAATCAGTGTCCT	57.228	32.000	7.56	0.06	42.45	3.85
4281	11027	7.330208	CCAAGAAATCAATGAAAATCAGTGTCC	59.670	37.037	7.56	0.00	42.45	4.02
4282	11028	8.084073	TCCAAGAAATCAATGAAAATCAGTGTC	58.916	33.333	7.56	0.00	42.45	3.67
4283	11029	7.954835	TCCAAGAAATCAATGAAAATCAGTGT	58.045	30.769	7.56	0.00	42.45	3.55
4284	11030	8.821147	TTCCAAGAAATCAATGAAAATCAGTG	57.179	30.769	1.63	1.63	43.13	3.66
4314	11060	9.752961	GTTTTTAGGTCCTTTTGCTATGTAAAA	57.247	29.630	0.00	0.00	0.00	1.52
4315	11061	8.915036	TGTTTTTAGGTCCTTTTGCTATGTAAA	58.085	29.630	0.00	0.00	0.00	2.01
4316	11062	8.466617	TGTTTTTAGGTCCTTTTGCTATGTAA	57.533	30.769	0.00	0.00	0.00	2.41
4317	11063	8.354426	GTTGTTTTTAGGTCCTTTTGCTATGTA	58.646	33.333	0.00	0.00	0.00	2.29
4318	11064	6.969993	TGTTTTTAGGTCCTTTTGCTATGT	57.030	33.333	0.00	0.00	0.00	2.29
4319	11065	7.433680	AGTTGTTTTTAGGTCCTTTTGCTATG	58.566	34.615	0.00	0.00	0.00	2.23
4320	11066	7.597288	AGTTGTTTTTAGGTCCTTTTGCTAT	57.403	32.000	0.00	0.00	0.00	2.97
4321	11067	8.522542	TTAGTTGTTTTTAGGTCCTTTTGCTA	57.477	30.769	0.00	0.00	0.00	3.49
4322	11068	5.932619	AGTTGTTTTTAGGTCCTTTTGCT	57.067	34.783	0.00	0.00	0.00	3.91
4323	11069	8.657074	ATTTAGTTGTTTTTAGGTCCTTTTGC	57.343	30.769	0.00	0.00	0.00	3.68
4324	11070	9.256477	GGATTTAGTTGTTTTTAGGTCCTTTTG	57.744	33.333	0.00	0.00	0.00	2.44
4325	11071	9.209048	AGGATTTAGTTGTTTTTAGGTCCTTTT	57.791	29.630	0.00	0.00	0.00	2.27
4326	11072	8.777578	AGGATTTAGTTGTTTTTAGGTCCTTT	57.222	30.769	0.00	0.00	0.00	3.11
4327	11073	9.293404	GTAGGATTTAGTTGTTTTTAGGTCCTT	57.707	33.333	0.00	0.00	34.46	3.36
4328	11074	8.666821	AGTAGGATTTAGTTGTTTTTAGGTCCT	58.333	33.333	0.00	0.00	36.43	3.85
4329	11075	8.859236	AGTAGGATTTAGTTGTTTTTAGGTCC	57.141	34.615	0.00	0.00	0.00	4.46
4330	11076	9.722184	AGAGTAGGATTTAGTTGTTTTTAGGTC	57.278	33.333	0.00	0.00	0.00	3.85
4338	11084	9.978336	AGTAGAGTAGAGTAGGATTTAGTTGTT	57.022	33.333	0.00	0.00	0.00	2.83
4339	11085	9.617523	GAGTAGAGTAGAGTAGGATTTAGTTGT	57.382	37.037	0.00	0.00	0.00	3.32
4340	11086	9.059260	GGAGTAGAGTAGAGTAGGATTTAGTTG	57.941	40.741	0.00	0.00	0.00	3.16
4341	11087	9.006405	AGGAGTAGAGTAGAGTAGGATTTAGTT	57.994	37.037	0.00	0.00	0.00	2.24
4342	11088	8.571460	AGGAGTAGAGTAGAGTAGGATTTAGT	57.429	38.462	0.00	0.00	0.00	2.24
4343	11089	9.498176	GAAGGAGTAGAGTAGAGTAGGATTTAG	57.502	40.741	0.00	0.00	0.00	1.85
4344	11090	8.439172	GGAAGGAGTAGAGTAGAGTAGGATTTA	58.561	40.741	0.00	0.00	0.00	1.40
4345	11091	7.292319	GGAAGGAGTAGAGTAGAGTAGGATTT	58.708	42.308	0.00	0.00	0.00	2.17
4346	11092	6.183361	GGGAAGGAGTAGAGTAGAGTAGGATT	60.183	46.154	0.00	0.00	0.00	3.01
4347	11093	5.311385	GGGAAGGAGTAGAGTAGAGTAGGAT	59.689	48.000	0.00	0.00	0.00	3.24
4348	11094	4.659835	GGGAAGGAGTAGAGTAGAGTAGGA	59.340	50.000	0.00	0.00	0.00	2.94
4349	11095	4.503643	CGGGAAGGAGTAGAGTAGAGTAGG	60.504	54.167	0.00	0.00	0.00	3.18
4350	11096	4.101430	ACGGGAAGGAGTAGAGTAGAGTAG	59.899	50.000	0.00	0.00	0.00	2.57
4351	11097	4.036518	ACGGGAAGGAGTAGAGTAGAGTA	58.963	47.826	0.00	0.00	0.00	2.59
4352	11098	2.845586	ACGGGAAGGAGTAGAGTAGAGT	59.154	50.000	0.00	0.00	0.00	3.24
4353	11099	3.564053	ACGGGAAGGAGTAGAGTAGAG	57.436	52.381	0.00	0.00	0.00	2.43
4354	11100	3.618351	CAACGGGAAGGAGTAGAGTAGA	58.382	50.000	0.00	0.00	0.00	2.59
4355	11101	2.688958	CCAACGGGAAGGAGTAGAGTAG	59.311	54.545	0.00	0.00	35.59	2.57
4356	11102	2.309755	TCCAACGGGAAGGAGTAGAGTA	59.690	50.000	0.00	0.00	41.32	2.59
4357	11103	1.076677	TCCAACGGGAAGGAGTAGAGT	59.923	52.381	0.00	0.00	41.32	3.24
4358	11104	1.751924	CTCCAACGGGAAGGAGTAGAG	59.248	57.143	0.00	0.00	44.38	2.43
4359	11105	1.848652	CTCCAACGGGAAGGAGTAGA	58.151	55.000	0.00	0.00	44.38	2.59
4364	11110	3.702048	CGCCTCCAACGGGAAGGA	61.702	66.667	0.00	0.00	44.38	3.36
4382	11128	4.353437	ACGACGACAAGGCCGGAC	62.353	66.667	5.05	0.00	0.00	4.79
4383	11129	4.351938	CACGACGACAAGGCCGGA	62.352	66.667	5.05	0.00	0.00	5.14
4384	11130	4.657824	ACACGACGACAAGGCCGG	62.658	66.667	0.00	0.00	0.00	6.13
4385	11131	2.660552	AACACGACGACAAGGCCG	60.661	61.111	0.00	0.00	0.00	6.13
4386	11132	2.935955	CAACACGACGACAAGGCC	59.064	61.111	0.00	0.00	0.00	5.19
4387	11133	2.159272	GAGCAACACGACGACAAGGC	62.159	60.000	0.00	0.00	0.00	4.35
4388	11134	0.874175	TGAGCAACACGACGACAAGG	60.874	55.000	0.00	0.00	0.00	3.61
4389	11135	0.504384	CTGAGCAACACGACGACAAG	59.496	55.000	0.00	0.00	0.00	3.16
4390	11136	0.874175	CCTGAGCAACACGACGACAA	60.874	55.000	0.00	0.00	0.00	3.18
4391	11137	1.299850	CCTGAGCAACACGACGACA	60.300	57.895	0.00	0.00	0.00	4.35
4392	11138	2.658707	GCCTGAGCAACACGACGAC	61.659	63.158	0.00	0.00	39.53	4.34
4393	11139	2.355837	GCCTGAGCAACACGACGA	60.356	61.111	0.00	0.00	39.53	4.20
4394	11140	3.767230	CGCCTGAGCAACACGACG	61.767	66.667	0.00	0.00	39.83	5.12
4395	11141	0.736325	ATACGCCTGAGCAACACGAC	60.736	55.000	0.00	0.00	39.83	4.34
4396	11142	0.457853	GATACGCCTGAGCAACACGA	60.458	55.000	0.00	0.00	39.83	4.35
4397	11143	1.742900	CGATACGCCTGAGCAACACG	61.743	60.000	0.00	0.00	39.83	4.49
4398	11144	0.736325	ACGATACGCCTGAGCAACAC	60.736	55.000	0.00	0.00	39.83	3.32
4399	11145	0.457853	GACGATACGCCTGAGCAACA	60.458	55.000	0.00	0.00	39.83	3.33
4400	11146	0.457853	TGACGATACGCCTGAGCAAC	60.458	55.000	0.00	0.00	39.83	4.17
4401	11147	0.459899	ATGACGATACGCCTGAGCAA	59.540	50.000	0.00	0.00	39.83	3.91
4402	11148	0.030773	GATGACGATACGCCTGAGCA	59.969	55.000	0.00	0.00	39.83	4.26
4403	11149	0.664767	GGATGACGATACGCCTGAGC	60.665	60.000	0.00	0.00	0.00	4.26
4404	11150	0.955178	AGGATGACGATACGCCTGAG	59.045	55.000	0.00	0.00	0.00	3.35
4405	11151	0.952280	GAGGATGACGATACGCCTGA	59.048	55.000	0.00	0.00	0.00	3.86
4406	11152	0.039074	GGAGGATGACGATACGCCTG	60.039	60.000	0.00	0.00	29.61	4.85
4407	11153	0.467474	TGGAGGATGACGATACGCCT	60.467	55.000	0.00	0.00	33.47	5.52
4408	11154	0.318784	GTGGAGGATGACGATACGCC	60.319	60.000	0.00	0.00	32.91	5.68
4409	11155	0.669077	AGTGGAGGATGACGATACGC	59.331	55.000	0.00	0.00	0.00	4.42
4410	11156	2.287668	GGAAGTGGAGGATGACGATACG	60.288	54.545	0.00	0.00	0.00	3.06
4411	11157	2.693591	TGGAAGTGGAGGATGACGATAC	59.306	50.000	0.00	0.00	0.00	2.24
4412	11158	2.959030	CTGGAAGTGGAGGATGACGATA	59.041	50.000	0.00	0.00	0.00	2.92
4413	11159	1.759445	CTGGAAGTGGAGGATGACGAT	59.241	52.381	0.00	0.00	0.00	3.73
4414	11160	1.186200	CTGGAAGTGGAGGATGACGA	58.814	55.000	0.00	0.00	0.00	4.20
4415	11161	0.460987	GCTGGAAGTGGAGGATGACG	60.461	60.000	0.00	0.00	35.30	4.35
4416	11162	0.107459	GGCTGGAAGTGGAGGATGAC	60.107	60.000	0.00	0.00	35.30	3.06
4417	11163	1.274703	GGGCTGGAAGTGGAGGATGA	61.275	60.000	0.00	0.00	35.30	2.92
4418	11164	1.225704	GGGCTGGAAGTGGAGGATG	59.774	63.158	0.00	0.00	35.30	3.51
4419	11165	2.003548	GGGGCTGGAAGTGGAGGAT	61.004	63.158	0.00	0.00	35.30	3.24
4420	11166	2.610859	GGGGCTGGAAGTGGAGGA	60.611	66.667	0.00	0.00	35.30	3.71
4421	11167	2.234296	AAGGGGCTGGAAGTGGAGG	61.234	63.158	0.00	0.00	35.30	4.30
4422	11168	1.001641	CAAGGGGCTGGAAGTGGAG	60.002	63.158	0.00	0.00	35.30	3.86
4423	11169	1.065410	TTCAAGGGGCTGGAAGTGGA	61.065	55.000	0.00	0.00	35.30	4.02
4424	11170	0.610232	CTTCAAGGGGCTGGAAGTGG	60.610	60.000	0.00	0.00	36.92	4.00
4425	11171	0.401738	TCTTCAAGGGGCTGGAAGTG	59.598	55.000	0.00	0.00	41.09	3.16
4426	11172	1.149101	TTCTTCAAGGGGCTGGAAGT	58.851	50.000	0.00	0.00	41.09	3.01
4427	11173	1.539157	GTTCTTCAAGGGGCTGGAAG	58.461	55.000	0.00	0.00	41.52	3.46
4428	11174	0.112412	GGTTCTTCAAGGGGCTGGAA	59.888	55.000	0.00	0.00	0.00	3.53
4429	11175	0.772124	AGGTTCTTCAAGGGGCTGGA	60.772	55.000	0.00	0.00	0.00	3.86
4430	11176	0.610232	CAGGTTCTTCAAGGGGCTGG	60.610	60.000	0.00	0.00	0.00	4.85
4431	11177	0.111253	ACAGGTTCTTCAAGGGGCTG	59.889	55.000	0.00	0.00	0.00	4.85
4432	11178	0.853530	AACAGGTTCTTCAAGGGGCT	59.146	50.000	0.00	0.00	0.00	5.19
4433	11179	0.961753	CAACAGGTTCTTCAAGGGGC	59.038	55.000	0.00	0.00	0.00	5.80
4434	11180	0.961753	GCAACAGGTTCTTCAAGGGG	59.038	55.000	0.00	0.00	0.00	4.79
4435	11181	0.593128	CGCAACAGGTTCTTCAAGGG	59.407	55.000	0.00	0.00	0.00	3.95
4436	11182	0.040067	GCGCAACAGGTTCTTCAAGG	60.040	55.000	0.30	0.00	0.00	3.61
4437	11183	0.947244	AGCGCAACAGGTTCTTCAAG	59.053	50.000	11.47	0.00	0.00	3.02
4438	11184	1.333619	GAAGCGCAACAGGTTCTTCAA	59.666	47.619	11.47	0.00	43.13	2.69
4439	11185	0.944386	GAAGCGCAACAGGTTCTTCA	59.056	50.000	11.47	0.00	43.13	3.02
4440	11186	0.110644	CGAAGCGCAACAGGTTCTTC	60.111	55.000	11.47	0.00	43.96	2.87
4441	11187	1.941812	CGAAGCGCAACAGGTTCTT	59.058	52.632	11.47	0.00	43.96	2.52
4442	11188	3.642755	CGAAGCGCAACAGGTTCT	58.357	55.556	11.47	0.00	43.96	3.01

Based at the University of Bristol with support from BBSRC.

AutoCloner maintained by Alex Coulton.