Multiple sequence alignment - TraesCS4A01G378200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G378200 chr4A 100.000 3869 0 0 1 3869 655265194 655261326 0.000000e+00 7145.0
1 TraesCS4A01G378200 chr4A 86.162 383 32 15 180 550 655264615 655264242 1.010000e-105 394.0
2 TraesCS4A01G378200 chr4A 86.162 383 32 15 580 953 655265015 655264645 1.010000e-105 394.0
3 TraesCS4A01G378200 chr7D 95.456 2355 82 8 987 3318 44303813 44301461 0.000000e+00 3733.0
4 TraesCS4A01G378200 chr7D 94.177 498 15 8 3371 3865 44301471 44300985 0.000000e+00 747.0
5 TraesCS4A01G378200 chr7D 83.120 391 56 7 172 556 545689559 545689173 7.960000e-92 348.0
6 TraesCS4A01G378200 chr7D 90.741 54 5 0 3318 3371 137848775 137848722 5.360000e-09 73.1
7 TraesCS4A01G378200 chr7A 94.243 2345 107 13 993 3318 46726571 46724236 0.000000e+00 3557.0
8 TraesCS4A01G378200 chr7A 82.734 417 57 8 171 580 725157453 725157861 1.320000e-94 357.0
9 TraesCS4A01G378200 chr7A 79.532 513 61 21 3371 3865 46724246 46723760 3.730000e-85 326.0
10 TraesCS4A01G378200 chr7A 97.674 43 1 0 3329 3371 221347614 221347572 1.490000e-09 75.0
11 TraesCS4A01G378200 chr2D 86.396 419 45 9 172 580 580135059 580134643 7.630000e-122 448.0
12 TraesCS4A01G378200 chr2D 82.238 411 65 6 171 576 606602921 606603328 7.960000e-92 348.0
13 TraesCS4A01G378200 chr2D 83.081 396 48 15 172 557 45689012 45688626 3.700000e-90 342.0
14 TraesCS4A01G378200 chr5B 85.024 414 53 7 173 580 488858895 488859305 2.780000e-111 412.0
15 TraesCS4A01G378200 chr5B 83.251 406 47 12 580 971 488858902 488859300 1.710000e-93 353.0
16 TraesCS4A01G378200 chr5B 80.387 413 51 16 577 971 573140908 573141308 1.760000e-73 287.0
17 TraesCS4A01G378200 chr1B 83.333 414 60 7 172 580 264347561 264347970 1.310000e-99 374.0
18 TraesCS4A01G378200 chr1B 82.152 409 46 17 580 972 264347569 264347966 3.730000e-85 326.0
19 TraesCS4A01G378200 chr1B 92.157 51 2 2 3323 3371 572111167 572111217 1.930000e-08 71.3
20 TraesCS4A01G378200 chr2A 82.857 420 57 12 170 580 109325448 109325861 2.840000e-96 363.0
21 TraesCS4A01G378200 chr2A 78.446 399 60 14 580 967 738117399 738117782 1.800000e-58 237.0
22 TraesCS4A01G378200 chr5A 81.937 382 44 17 580 951 138203924 138204290 2.260000e-77 300.0
23 TraesCS4A01G378200 chr5A 89.091 55 5 1 3318 3371 412650137 412650083 2.490000e-07 67.6
24 TraesCS4A01G378200 chr2B 81.723 383 46 19 580 952 753005576 753005208 8.130000e-77 298.0
25 TraesCS4A01G378200 chr2B 94.118 51 2 1 3321 3371 140112933 140112982 4.150000e-10 76.8
26 TraesCS4A01G378200 chr6A 80.435 414 54 17 580 972 406124650 406124243 1.360000e-74 291.0
27 TraesCS4A01G378200 chr3B 80.726 358 47 15 580 924 760962566 760962914 3.830000e-65 259.0
28 TraesCS4A01G378200 chr3B 92.000 50 2 2 3322 3371 159565762 159565809 6.940000e-08 69.4
29 TraesCS4A01G378200 chr5D 78.973 409 57 15 580 970 39061708 39061311 6.420000e-63 252.0
30 TraesCS4A01G378200 chr7B 93.750 48 3 0 3324 3371 651415255 651415208 5.360000e-09 73.1
31 TraesCS4A01G378200 chr7B 89.474 57 6 0 3315 3371 744223284 744223340 5.360000e-09 73.1
32 TraesCS4A01G378200 chr4D 100.000 39 0 0 2953 2991 6274763 6274801 5.360000e-09 73.1
33 TraesCS4A01G378200 chr1D 88.889 54 6 0 3318 3371 401355100 401355047 2.490000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G378200 chr4A 655261326 655265194 3868 True 2644.333333 7145 90.774667 1 3869 3 chr4A.!!$R1 3868
1 TraesCS4A01G378200 chr7D 44300985 44303813 2828 True 2240.000000 3733 94.816500 987 3865 2 chr7D.!!$R3 2878
2 TraesCS4A01G378200 chr7A 46723760 46726571 2811 True 1941.500000 3557 86.887500 993 3865 2 chr7A.!!$R2 2872

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
990 991 0.036875 CCACACAAGTCTCCCCCTTC 59.963 60.0 0.00 0.0 0.0 3.46 F
1116 1117 0.321210 ACGCGTTCATCCATGTCCAA 60.321 50.0 5.58 0.0 0.0 3.53 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1962 1963 0.383949 CACCCAAAAACGTCACCTGG 59.616 55.0 0.00 0.0 0.00 4.45 R
2975 2976 0.989602 ACTTAGCCTGGGGTAACACC 59.010 55.0 7.13 0.0 42.17 4.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 5.892160 ATCATTCAATTCACACACTCTGG 57.108 39.130 0.00 0.00 0.00 3.86
23 24 4.971939 TCATTCAATTCACACACTCTGGA 58.028 39.130 0.00 0.00 0.00 3.86
24 25 5.563592 TCATTCAATTCACACACTCTGGAT 58.436 37.500 0.00 0.00 0.00 3.41
25 26 6.005823 TCATTCAATTCACACACTCTGGATT 58.994 36.000 0.00 0.00 0.00 3.01
26 27 6.491062 TCATTCAATTCACACACTCTGGATTT 59.509 34.615 0.00 0.00 0.00 2.17
27 28 6.713762 TTCAATTCACACACTCTGGATTTT 57.286 33.333 0.00 0.00 0.00 1.82
28 29 6.317789 TCAATTCACACACTCTGGATTTTC 57.682 37.500 0.00 0.00 0.00 2.29
29 30 5.827267 TCAATTCACACACTCTGGATTTTCA 59.173 36.000 0.00 0.00 0.00 2.69
30 31 6.320926 TCAATTCACACACTCTGGATTTTCAA 59.679 34.615 0.00 0.00 0.00 2.69
31 32 6.713762 ATTCACACACTCTGGATTTTCAAA 57.286 33.333 0.00 0.00 0.00 2.69
32 33 6.713762 TTCACACACTCTGGATTTTCAAAT 57.286 33.333 0.00 0.00 0.00 2.32
33 34 6.317789 TCACACACTCTGGATTTTCAAATC 57.682 37.500 3.97 3.97 43.12 2.17
34 35 5.827267 TCACACACTCTGGATTTTCAAATCA 59.173 36.000 13.10 1.06 45.10 2.57
35 36 6.016860 TCACACACTCTGGATTTTCAAATCAG 60.017 38.462 13.10 9.02 45.10 2.90
36 37 5.159209 CACACTCTGGATTTTCAAATCAGC 58.841 41.667 13.10 0.00 45.10 4.26
37 38 4.219288 ACACTCTGGATTTTCAAATCAGCC 59.781 41.667 13.10 0.00 45.10 4.85
38 39 4.461781 CACTCTGGATTTTCAAATCAGCCT 59.538 41.667 13.10 0.00 45.10 4.58
39 40 5.047519 CACTCTGGATTTTCAAATCAGCCTT 60.048 40.000 13.10 0.00 45.10 4.35
40 41 5.047519 ACTCTGGATTTTCAAATCAGCCTTG 60.048 40.000 13.10 2.64 45.10 3.61
41 42 3.929094 TGGATTTTCAAATCAGCCTTGC 58.071 40.909 13.10 0.00 45.10 4.01
42 43 3.579586 TGGATTTTCAAATCAGCCTTGCT 59.420 39.130 13.10 0.00 45.10 3.91
43 44 4.040706 TGGATTTTCAAATCAGCCTTGCTT 59.959 37.500 13.10 0.00 45.10 3.91
44 45 4.390909 GGATTTTCAAATCAGCCTTGCTTG 59.609 41.667 13.10 0.00 45.10 4.01
45 46 4.669206 TTTTCAAATCAGCCTTGCTTGA 57.331 36.364 0.00 0.00 36.40 3.02
46 47 4.877378 TTTCAAATCAGCCTTGCTTGAT 57.123 36.364 0.00 0.00 36.40 2.57
47 48 5.981088 TTTCAAATCAGCCTTGCTTGATA 57.019 34.783 0.00 0.00 36.40 2.15
48 49 5.571784 TTCAAATCAGCCTTGCTTGATAG 57.428 39.130 0.00 0.00 36.40 2.08
61 62 2.799412 GCTTGATAGCAGACTGAATCGG 59.201 50.000 6.65 6.64 46.95 4.18
62 63 3.388308 CTTGATAGCAGACTGAATCGGG 58.612 50.000 6.65 2.15 0.00 5.14
63 64 1.688735 TGATAGCAGACTGAATCGGGG 59.311 52.381 6.65 0.00 0.00 5.73
64 65 1.689273 GATAGCAGACTGAATCGGGGT 59.311 52.381 6.65 0.00 0.00 4.95
65 66 1.568504 TAGCAGACTGAATCGGGGTT 58.431 50.000 6.65 0.00 0.00 4.11
66 67 0.250513 AGCAGACTGAATCGGGGTTC 59.749 55.000 6.65 0.00 0.00 3.62
67 68 0.744771 GCAGACTGAATCGGGGTTCC 60.745 60.000 6.65 0.00 0.00 3.62
68 69 0.613260 CAGACTGAATCGGGGTTCCA 59.387 55.000 0.00 0.00 0.00 3.53
69 70 0.613777 AGACTGAATCGGGGTTCCAC 59.386 55.000 0.00 0.00 0.00 4.02
70 71 0.739813 GACTGAATCGGGGTTCCACG 60.740 60.000 7.21 7.21 0.00 4.94
71 72 2.046700 TGAATCGGGGTTCCACGC 60.047 61.111 8.77 0.00 0.00 5.34
72 73 2.267961 GAATCGGGGTTCCACGCT 59.732 61.111 8.77 0.00 0.00 5.07
73 74 1.259142 TGAATCGGGGTTCCACGCTA 61.259 55.000 8.77 0.00 0.00 4.26
74 75 0.106149 GAATCGGGGTTCCACGCTAT 59.894 55.000 8.77 0.00 0.00 2.97
75 76 0.106149 AATCGGGGTTCCACGCTATC 59.894 55.000 8.77 0.00 0.00 2.08
76 77 2.083835 ATCGGGGTTCCACGCTATCG 62.084 60.000 8.77 0.00 42.43 2.92
77 78 2.108362 GGGGTTCCACGCTATCGG 59.892 66.667 0.00 0.00 40.69 4.18
78 79 2.588034 GGGTTCCACGCTATCGGC 60.588 66.667 0.00 0.00 40.69 5.54
79 80 2.499685 GGTTCCACGCTATCGGCT 59.500 61.111 0.00 0.00 40.69 5.52
80 81 1.591863 GGTTCCACGCTATCGGCTC 60.592 63.158 0.00 0.00 40.69 4.70
81 82 1.944676 GTTCCACGCTATCGGCTCG 60.945 63.158 0.00 0.00 40.69 5.03
82 83 3.768185 TTCCACGCTATCGGCTCGC 62.768 63.158 0.00 0.00 40.69 5.03
83 84 4.569023 CCACGCTATCGGCTCGCA 62.569 66.667 0.00 0.00 40.69 5.10
84 85 2.355126 CACGCTATCGGCTCGCAT 60.355 61.111 0.00 0.00 40.69 4.73
85 86 2.355126 ACGCTATCGGCTCGCATG 60.355 61.111 0.00 0.00 40.69 4.06
86 87 2.355126 CGCTATCGGCTCGCATGT 60.355 61.111 0.00 0.00 39.13 3.21
87 88 1.081442 CGCTATCGGCTCGCATGTA 60.081 57.895 0.00 0.00 39.13 2.29
88 89 1.067743 CGCTATCGGCTCGCATGTAG 61.068 60.000 0.00 0.00 39.13 2.74
89 90 0.734253 GCTATCGGCTCGCATGTAGG 60.734 60.000 0.00 0.00 38.06 3.18
90 91 0.734253 CTATCGGCTCGCATGTAGGC 60.734 60.000 12.00 12.00 36.24 3.93
91 92 2.154798 TATCGGCTCGCATGTAGGCC 62.155 60.000 15.02 13.83 41.02 5.19
92 93 4.529219 CGGCTCGCATGTAGGCCA 62.529 66.667 19.28 0.00 44.27 5.36
93 94 2.590007 GGCTCGCATGTAGGCCAG 60.590 66.667 5.01 0.00 43.59 4.85
94 95 2.501128 GCTCGCATGTAGGCCAGA 59.499 61.111 5.01 0.00 0.00 3.86
95 96 1.593750 GCTCGCATGTAGGCCAGAG 60.594 63.158 5.01 2.94 0.00 3.35
96 97 1.068753 CTCGCATGTAGGCCAGAGG 59.931 63.158 5.01 0.00 0.00 3.69
97 98 1.680522 CTCGCATGTAGGCCAGAGGT 61.681 60.000 5.01 0.00 0.00 3.85
98 99 1.221840 CGCATGTAGGCCAGAGGTT 59.778 57.895 5.01 0.00 0.00 3.50
99 100 0.811616 CGCATGTAGGCCAGAGGTTC 60.812 60.000 5.01 0.00 0.00 3.62
100 101 0.464554 GCATGTAGGCCAGAGGTTCC 60.465 60.000 5.01 0.00 0.00 3.62
101 102 0.911769 CATGTAGGCCAGAGGTTCCA 59.088 55.000 5.01 0.00 0.00 3.53
102 103 1.492176 CATGTAGGCCAGAGGTTCCAT 59.508 52.381 5.01 0.00 0.00 3.41
103 104 0.911769 TGTAGGCCAGAGGTTCCATG 59.088 55.000 5.01 0.00 0.00 3.66
104 105 0.912486 GTAGGCCAGAGGTTCCATGT 59.088 55.000 5.01 0.00 0.00 3.21
105 106 1.282157 GTAGGCCAGAGGTTCCATGTT 59.718 52.381 5.01 0.00 0.00 2.71
106 107 0.038744 AGGCCAGAGGTTCCATGTTG 59.961 55.000 5.01 0.00 0.00 3.33
107 108 0.967380 GGCCAGAGGTTCCATGTTGG 60.967 60.000 0.00 0.00 39.43 3.77
108 109 0.251341 GCCAGAGGTTCCATGTTGGT 60.251 55.000 0.00 0.00 39.03 3.67
109 110 1.823250 GCCAGAGGTTCCATGTTGGTT 60.823 52.381 0.00 0.00 39.03 3.67
110 111 1.888512 CCAGAGGTTCCATGTTGGTTG 59.111 52.381 0.00 0.00 39.03 3.77
111 112 2.586425 CAGAGGTTCCATGTTGGTTGT 58.414 47.619 0.00 0.00 39.03 3.32
112 113 2.554032 CAGAGGTTCCATGTTGGTTGTC 59.446 50.000 0.00 0.00 39.03 3.18
113 114 1.886542 GAGGTTCCATGTTGGTTGTCC 59.113 52.381 0.00 0.00 39.03 4.02
114 115 0.596082 GGTTCCATGTTGGTTGTCCG 59.404 55.000 0.00 0.00 39.03 4.79
115 116 1.600023 GTTCCATGTTGGTTGTCCGA 58.400 50.000 0.00 0.00 39.03 4.55
116 117 1.265905 GTTCCATGTTGGTTGTCCGAC 59.734 52.381 0.00 0.00 45.81 4.79
120 121 3.326109 GTTGGTTGTCCGACGTGG 58.674 61.111 0.00 0.00 38.23 4.94
121 122 2.589442 TTGGTTGTCCGACGTGGC 60.589 61.111 0.00 0.00 37.80 5.01
122 123 4.953868 TGGTTGTCCGACGTGGCG 62.954 66.667 0.00 0.00 37.80 5.69
138 139 3.846955 GCGGTAGCACCCTTTCTAA 57.153 52.632 0.00 0.00 44.35 2.10
139 140 2.103537 GCGGTAGCACCCTTTCTAAA 57.896 50.000 0.00 0.00 44.35 1.85
140 141 2.640184 GCGGTAGCACCCTTTCTAAAT 58.360 47.619 0.00 0.00 44.35 1.40
141 142 2.612672 GCGGTAGCACCCTTTCTAAATC 59.387 50.000 0.00 0.00 44.35 2.17
142 143 2.864343 CGGTAGCACCCTTTCTAAATCG 59.136 50.000 0.00 0.00 33.75 3.34
143 144 3.203716 GGTAGCACCCTTTCTAAATCGG 58.796 50.000 0.00 0.00 30.04 4.18
144 145 2.420058 AGCACCCTTTCTAAATCGGG 57.580 50.000 0.00 0.00 42.53 5.14
145 146 1.064685 AGCACCCTTTCTAAATCGGGG 60.065 52.381 0.00 0.00 41.11 5.73
149 150 3.359695 CCCTTTCTAAATCGGGGTTCA 57.640 47.619 0.00 0.00 32.91 3.18
150 151 3.279434 CCCTTTCTAAATCGGGGTTCAG 58.721 50.000 0.00 0.00 32.91 3.02
151 152 3.279434 CCTTTCTAAATCGGGGTTCAGG 58.721 50.000 0.00 0.00 0.00 3.86
152 153 3.054655 CCTTTCTAAATCGGGGTTCAGGA 60.055 47.826 0.00 0.00 0.00 3.86
153 154 3.906720 TTCTAAATCGGGGTTCAGGAG 57.093 47.619 0.00 0.00 0.00 3.69
154 155 2.829023 TCTAAATCGGGGTTCAGGAGT 58.171 47.619 0.00 0.00 0.00 3.85
155 156 2.764572 TCTAAATCGGGGTTCAGGAGTC 59.235 50.000 0.00 0.00 0.00 3.36
156 157 0.249398 AAATCGGGGTTCAGGAGTCG 59.751 55.000 0.00 0.00 0.00 4.18
157 158 2.240162 AATCGGGGTTCAGGAGTCGC 62.240 60.000 0.00 0.00 0.00 5.19
158 159 3.382832 CGGGGTTCAGGAGTCGCT 61.383 66.667 0.00 0.00 0.00 4.93
159 160 2.266055 GGGGTTCAGGAGTCGCTG 59.734 66.667 3.04 3.04 0.00 5.18
160 161 2.435059 GGGTTCAGGAGTCGCTGC 60.435 66.667 4.29 0.00 0.00 5.25
161 162 2.435059 GGTTCAGGAGTCGCTGCC 60.435 66.667 0.00 0.00 0.00 4.85
162 163 2.659610 GTTCAGGAGTCGCTGCCT 59.340 61.111 0.00 0.00 33.99 4.75
163 164 1.446966 GTTCAGGAGTCGCTGCCTC 60.447 63.158 0.00 0.00 30.41 4.70
164 165 1.607756 TTCAGGAGTCGCTGCCTCT 60.608 57.895 6.00 0.00 30.41 3.69
165 166 1.188219 TTCAGGAGTCGCTGCCTCTT 61.188 55.000 6.00 0.00 30.41 2.85
166 167 1.188219 TCAGGAGTCGCTGCCTCTTT 61.188 55.000 6.00 0.00 30.41 2.52
167 168 0.739112 CAGGAGTCGCTGCCTCTTTC 60.739 60.000 6.00 0.00 30.41 2.62
168 169 0.902516 AGGAGTCGCTGCCTCTTTCT 60.903 55.000 6.00 0.05 0.00 2.52
169 170 0.818296 GGAGTCGCTGCCTCTTTCTA 59.182 55.000 6.00 0.00 0.00 2.10
170 171 1.202359 GGAGTCGCTGCCTCTTTCTAG 60.202 57.143 6.00 0.00 0.00 2.43
171 172 0.820871 AGTCGCTGCCTCTTTCTAGG 59.179 55.000 0.00 0.00 39.87 3.02
172 173 0.179097 GTCGCTGCCTCTTTCTAGGG 60.179 60.000 0.00 0.00 37.11 3.53
173 174 1.144936 CGCTGCCTCTTTCTAGGGG 59.855 63.158 0.00 0.00 45.72 4.79
174 175 1.529309 GCTGCCTCTTTCTAGGGGG 59.471 63.158 0.00 0.00 42.88 5.40
175 176 0.983378 GCTGCCTCTTTCTAGGGGGA 60.983 60.000 0.00 0.00 42.88 4.81
176 177 3.324246 TGCCTCTTTCTAGGGGGAG 57.676 57.895 0.00 0.00 42.88 4.30
177 178 0.716591 TGCCTCTTTCTAGGGGGAGA 59.283 55.000 0.00 0.00 42.88 3.71
178 179 1.124780 GCCTCTTTCTAGGGGGAGAC 58.875 60.000 0.00 0.00 42.88 3.36
179 180 1.343580 GCCTCTTTCTAGGGGGAGACT 60.344 57.143 0.00 0.00 42.88 3.24
180 181 2.894864 GCCTCTTTCTAGGGGGAGACTT 60.895 54.545 0.00 0.00 42.88 3.01
181 182 2.769095 CCTCTTTCTAGGGGGAGACTTG 59.231 54.545 7.85 0.00 38.49 3.16
182 183 3.445987 CTCTTTCTAGGGGGAGACTTGT 58.554 50.000 0.00 0.00 0.00 3.16
183 184 4.572223 CCTCTTTCTAGGGGGAGACTTGTA 60.572 50.000 7.85 0.00 38.49 2.41
184 185 5.212745 CTCTTTCTAGGGGGAGACTTGTAT 58.787 45.833 0.00 0.00 0.00 2.29
185 186 4.962995 TCTTTCTAGGGGGAGACTTGTATG 59.037 45.833 0.00 0.00 0.00 2.39
186 187 4.620086 TTCTAGGGGGAGACTTGTATGA 57.380 45.455 0.00 0.00 0.00 2.15
187 188 4.834406 TCTAGGGGGAGACTTGTATGAT 57.166 45.455 0.00 0.00 0.00 2.45
188 189 5.942977 TCTAGGGGGAGACTTGTATGATA 57.057 43.478 0.00 0.00 0.00 2.15
189 190 6.485388 TCTAGGGGGAGACTTGTATGATAT 57.515 41.667 0.00 0.00 0.00 1.63
190 191 6.494952 TCTAGGGGGAGACTTGTATGATATC 58.505 44.000 0.00 0.00 0.00 1.63
191 192 5.361630 AGGGGGAGACTTGTATGATATCT 57.638 43.478 3.98 0.00 0.00 1.98
192 193 5.337788 AGGGGGAGACTTGTATGATATCTC 58.662 45.833 3.98 0.00 35.99 2.75
193 194 5.087323 GGGGGAGACTTGTATGATATCTCA 58.913 45.833 3.98 0.00 38.03 3.27
194 195 5.046950 GGGGGAGACTTGTATGATATCTCAC 60.047 48.000 3.98 2.58 38.81 3.51
195 196 5.540337 GGGGAGACTTGTATGATATCTCACA 59.460 44.000 3.98 5.19 40.87 3.58
196 197 6.212388 GGGGAGACTTGTATGATATCTCACAT 59.788 42.308 3.98 0.00 40.87 3.21
197 198 7.256475 GGGGAGACTTGTATGATATCTCACATT 60.256 40.741 3.98 0.00 40.87 2.71
198 199 8.153550 GGGAGACTTGTATGATATCTCACATTT 58.846 37.037 3.98 0.00 39.25 2.32
202 203 9.988815 GACTTGTATGATATCTCACATTTAGGT 57.011 33.333 3.98 3.37 33.22 3.08
203 204 9.770097 ACTTGTATGATATCTCACATTTAGGTG 57.230 33.333 3.98 0.00 40.16 4.00
204 205 9.987272 CTTGTATGATATCTCACATTTAGGTGA 57.013 33.333 3.98 0.00 45.06 4.02
211 212 2.809446 TCACATTTAGGTGAGATCGCG 58.191 47.619 0.00 0.00 42.56 5.87
212 213 2.425668 TCACATTTAGGTGAGATCGCGA 59.574 45.455 13.09 13.09 42.56 5.87
213 214 2.791560 CACATTTAGGTGAGATCGCGAG 59.208 50.000 16.66 0.00 41.32 5.03
214 215 3.489229 CACATTTAGGTGAGATCGCGAGA 60.489 47.826 16.66 0.00 42.68 4.04
228 229 3.849911 TCGCGAGATCAATCTGAAAAGT 58.150 40.909 3.71 0.00 37.25 2.66
229 230 4.245660 TCGCGAGATCAATCTGAAAAGTT 58.754 39.130 3.71 0.00 37.25 2.66
230 231 4.327357 TCGCGAGATCAATCTGAAAAGTTC 59.673 41.667 3.71 0.00 37.25 3.01
231 232 4.091945 CGCGAGATCAATCTGAAAAGTTCA 59.908 41.667 0.00 0.00 37.25 3.18
232 233 5.220548 CGCGAGATCAATCTGAAAAGTTCAT 60.221 40.000 0.00 0.00 39.30 2.57
233 234 6.019559 CGCGAGATCAATCTGAAAAGTTCATA 60.020 38.462 0.00 0.00 39.30 2.15
234 235 7.307042 CGCGAGATCAATCTGAAAAGTTCATAT 60.307 37.037 0.00 0.00 39.30 1.78
235 236 8.341173 GCGAGATCAATCTGAAAAGTTCATATT 58.659 33.333 0.00 0.00 39.30 1.28
289 290 8.862325 TTGACAACATTCATTTAGGTATGTCT 57.138 30.769 0.00 0.00 36.51 3.41
290 291 9.952030 TTGACAACATTCATTTAGGTATGTCTA 57.048 29.630 0.00 0.00 36.51 2.59
291 292 9.378551 TGACAACATTCATTTAGGTATGTCTAC 57.621 33.333 0.00 0.00 36.51 2.59
292 293 9.378551 GACAACATTCATTTAGGTATGTCTACA 57.621 33.333 0.00 0.00 33.65 2.74
293 294 9.733556 ACAACATTCATTTAGGTATGTCTACAA 57.266 29.630 0.00 0.00 31.25 2.41
294 295 9.988350 CAACATTCATTTAGGTATGTCTACAAC 57.012 33.333 0.00 0.00 31.25 3.32
295 296 9.959721 AACATTCATTTAGGTATGTCTACAACT 57.040 29.630 0.00 0.00 31.25 3.16
322 323 6.645790 AAAAATCAGCTCAGAACTTGATGT 57.354 33.333 0.00 0.00 34.68 3.06
323 324 7.750229 AAAAATCAGCTCAGAACTTGATGTA 57.250 32.000 0.00 0.00 34.68 2.29
324 325 6.734104 AAATCAGCTCAGAACTTGATGTAC 57.266 37.500 0.00 0.00 34.68 2.90
325 326 4.871933 TCAGCTCAGAACTTGATGTACA 57.128 40.909 0.00 0.00 34.68 2.90
326 327 5.411831 TCAGCTCAGAACTTGATGTACAT 57.588 39.130 8.43 8.43 34.68 2.29
327 328 5.798132 TCAGCTCAGAACTTGATGTACATT 58.202 37.500 10.30 0.00 34.68 2.71
328 329 6.233434 TCAGCTCAGAACTTGATGTACATTT 58.767 36.000 10.30 0.00 34.68 2.32
329 330 7.386059 TCAGCTCAGAACTTGATGTACATTTA 58.614 34.615 10.30 0.00 34.68 1.40
330 331 7.547019 TCAGCTCAGAACTTGATGTACATTTAG 59.453 37.037 10.30 12.35 34.68 1.85
331 332 7.547019 CAGCTCAGAACTTGATGTACATTTAGA 59.453 37.037 19.26 8.10 34.68 2.10
332 333 7.763528 AGCTCAGAACTTGATGTACATTTAGAG 59.236 37.037 19.26 15.19 34.68 2.43
333 334 7.761704 GCTCAGAACTTGATGTACATTTAGAGA 59.238 37.037 19.26 12.21 34.68 3.10
334 335 9.814899 CTCAGAACTTGATGTACATTTAGAGAT 57.185 33.333 19.26 7.72 34.68 2.75
366 367 9.480053 AAAGACAAATTTGAATGTGAATAGTGG 57.520 29.630 24.64 0.00 0.00 4.00
367 368 7.092716 AGACAAATTTGAATGTGAATAGTGGC 58.907 34.615 24.64 0.00 0.00 5.01
368 369 6.757237 ACAAATTTGAATGTGAATAGTGGCA 58.243 32.000 24.64 0.00 0.00 4.92
369 370 6.869913 ACAAATTTGAATGTGAATAGTGGCAG 59.130 34.615 24.64 0.00 0.00 4.85
370 371 4.439305 TTTGAATGTGAATAGTGGCAGC 57.561 40.909 0.00 0.00 0.00 5.25
371 372 3.354948 TGAATGTGAATAGTGGCAGCT 57.645 42.857 0.00 0.00 0.00 4.24
372 373 3.689347 TGAATGTGAATAGTGGCAGCTT 58.311 40.909 0.00 0.00 0.00 3.74
373 374 4.081406 TGAATGTGAATAGTGGCAGCTTT 58.919 39.130 0.00 0.00 0.00 3.51
374 375 4.082625 TGAATGTGAATAGTGGCAGCTTTG 60.083 41.667 0.00 0.00 0.00 2.77
375 376 3.138884 TGTGAATAGTGGCAGCTTTGA 57.861 42.857 0.00 0.00 0.00 2.69
376 377 3.076621 TGTGAATAGTGGCAGCTTTGAG 58.923 45.455 0.00 0.00 0.00 3.02
377 378 3.077359 GTGAATAGTGGCAGCTTTGAGT 58.923 45.455 0.00 0.00 0.00 3.41
378 379 3.076621 TGAATAGTGGCAGCTTTGAGTG 58.923 45.455 0.00 0.00 0.00 3.51
379 380 3.244526 TGAATAGTGGCAGCTTTGAGTGA 60.245 43.478 0.00 0.00 0.00 3.41
380 381 2.928801 TAGTGGCAGCTTTGAGTGAA 57.071 45.000 0.00 0.00 0.00 3.18
381 382 2.283145 AGTGGCAGCTTTGAGTGAAT 57.717 45.000 0.00 0.00 0.00 2.57
382 383 3.423539 AGTGGCAGCTTTGAGTGAATA 57.576 42.857 0.00 0.00 0.00 1.75
383 384 3.077359 AGTGGCAGCTTTGAGTGAATAC 58.923 45.455 0.00 0.00 0.00 1.89
384 385 3.077359 GTGGCAGCTTTGAGTGAATACT 58.923 45.455 0.00 0.00 40.66 2.12
385 386 3.503748 GTGGCAGCTTTGAGTGAATACTT 59.496 43.478 0.00 0.00 37.25 2.24
386 387 4.022849 GTGGCAGCTTTGAGTGAATACTTT 60.023 41.667 0.00 0.00 37.25 2.66
387 388 4.022935 TGGCAGCTTTGAGTGAATACTTTG 60.023 41.667 0.00 0.00 37.25 2.77
388 389 4.216257 GGCAGCTTTGAGTGAATACTTTGA 59.784 41.667 0.00 0.00 37.25 2.69
389 390 5.149977 GCAGCTTTGAGTGAATACTTTGAC 58.850 41.667 0.00 0.00 37.25 3.18
390 391 5.277974 GCAGCTTTGAGTGAATACTTTGACA 60.278 40.000 0.00 0.00 37.25 3.58
391 392 6.138761 CAGCTTTGAGTGAATACTTTGACAC 58.861 40.000 0.00 0.00 37.25 3.67
392 393 6.017605 CAGCTTTGAGTGAATACTTTGACACT 60.018 38.462 0.00 0.00 44.56 3.55
393 394 7.171508 CAGCTTTGAGTGAATACTTTGACACTA 59.828 37.037 0.00 0.00 42.45 2.74
394 395 7.880195 AGCTTTGAGTGAATACTTTGACACTAT 59.120 33.333 0.00 0.00 42.45 2.12
395 396 8.507249 GCTTTGAGTGAATACTTTGACACTATT 58.493 33.333 0.00 0.00 42.45 1.73
397 398 9.554395 TTTGAGTGAATACTTTGACACTATTCA 57.446 29.630 0.00 5.74 42.45 2.57
400 401 7.347508 GTGAATACTTTGACACTATTCACGT 57.652 36.000 16.62 0.00 43.11 4.49
401 402 7.793902 GTGAATACTTTGACACTATTCACGTT 58.206 34.615 16.62 0.00 43.11 3.99
402 403 8.280497 GTGAATACTTTGACACTATTCACGTTT 58.720 33.333 16.62 0.00 43.11 3.60
403 404 8.279800 TGAATACTTTGACACTATTCACGTTTG 58.720 33.333 0.00 0.00 33.77 2.93
404 405 7.956420 ATACTTTGACACTATTCACGTTTGA 57.044 32.000 0.00 0.00 0.00 2.69
405 406 6.861065 ACTTTGACACTATTCACGTTTGAT 57.139 33.333 0.00 0.00 0.00 2.57
406 407 7.259290 ACTTTGACACTATTCACGTTTGATT 57.741 32.000 0.00 0.00 0.00 2.57
407 408 7.703328 ACTTTGACACTATTCACGTTTGATTT 58.297 30.769 0.00 0.00 0.00 2.17
408 409 8.188139 ACTTTGACACTATTCACGTTTGATTTT 58.812 29.630 0.00 0.00 0.00 1.82
409 410 7.906611 TTGACACTATTCACGTTTGATTTTG 57.093 32.000 0.00 0.00 0.00 2.44
410 411 7.022055 TGACACTATTCACGTTTGATTTTGT 57.978 32.000 0.00 0.00 0.00 2.83
411 412 7.129622 TGACACTATTCACGTTTGATTTTGTC 58.870 34.615 0.00 0.00 33.10 3.18
412 413 7.011950 TGACACTATTCACGTTTGATTTTGTCT 59.988 33.333 10.46 0.00 33.34 3.41
413 414 7.703328 ACACTATTCACGTTTGATTTTGTCTT 58.297 30.769 0.00 0.00 0.00 3.01
414 415 8.188139 ACACTATTCACGTTTGATTTTGTCTTT 58.812 29.630 0.00 0.00 0.00 2.52
415 416 9.019764 CACTATTCACGTTTGATTTTGTCTTTT 57.980 29.630 0.00 0.00 0.00 2.27
419 420 8.918961 TTCACGTTTGATTTTGTCTTTTATGT 57.081 26.923 0.00 0.00 0.00 2.29
420 421 8.918961 TCACGTTTGATTTTGTCTTTTATGTT 57.081 26.923 0.00 0.00 0.00 2.71
421 422 9.360093 TCACGTTTGATTTTGTCTTTTATGTTT 57.640 25.926 0.00 0.00 0.00 2.83
422 423 9.618410 CACGTTTGATTTTGTCTTTTATGTTTC 57.382 29.630 0.00 0.00 0.00 2.78
423 424 9.581099 ACGTTTGATTTTGTCTTTTATGTTTCT 57.419 25.926 0.00 0.00 0.00 2.52
555 556 9.948964 TTAGAAAAGACAATCTCATTCATCTCA 57.051 29.630 6.94 0.00 29.68 3.27
556 557 8.266392 AGAAAAGACAATCTCATTCATCTCAC 57.734 34.615 6.94 0.00 29.68 3.51
557 558 6.998968 AAAGACAATCTCATTCATCTCACC 57.001 37.500 0.00 0.00 0.00 4.02
558 559 5.954153 AGACAATCTCATTCATCTCACCT 57.046 39.130 0.00 0.00 0.00 4.00
559 560 7.429374 AAGACAATCTCATTCATCTCACCTA 57.571 36.000 0.00 0.00 0.00 3.08
560 561 7.429374 AGACAATCTCATTCATCTCACCTAA 57.571 36.000 0.00 0.00 0.00 2.69
561 562 7.271511 AGACAATCTCATTCATCTCACCTAAC 58.728 38.462 0.00 0.00 0.00 2.34
562 563 6.950842 ACAATCTCATTCATCTCACCTAACA 58.049 36.000 0.00 0.00 0.00 2.41
563 564 7.571919 ACAATCTCATTCATCTCACCTAACAT 58.428 34.615 0.00 0.00 0.00 2.71
564 565 7.498239 ACAATCTCATTCATCTCACCTAACATG 59.502 37.037 0.00 0.00 0.00 3.21
565 566 5.922053 TCTCATTCATCTCACCTAACATGG 58.078 41.667 0.00 0.00 0.00 3.66
566 567 5.039920 TCATTCATCTCACCTAACATGGG 57.960 43.478 0.00 0.00 0.00 4.00
567 568 4.721274 TCATTCATCTCACCTAACATGGGA 59.279 41.667 0.00 0.00 0.00 4.37
568 569 5.370584 TCATTCATCTCACCTAACATGGGAT 59.629 40.000 0.00 0.00 37.80 3.85
569 570 4.963318 TCATCTCACCTAACATGGGATC 57.037 45.455 0.00 0.00 34.95 3.36
570 571 4.560739 TCATCTCACCTAACATGGGATCT 58.439 43.478 0.00 0.00 34.95 2.75
571 572 4.590647 TCATCTCACCTAACATGGGATCTC 59.409 45.833 0.00 0.00 34.95 2.75
572 573 2.959030 TCTCACCTAACATGGGATCTCG 59.041 50.000 0.00 0.00 0.00 4.04
573 574 1.412710 TCACCTAACATGGGATCTCGC 59.587 52.381 0.00 0.00 0.00 5.03
574 575 1.138859 CACCTAACATGGGATCTCGCA 59.861 52.381 0.00 0.00 43.04 5.10
575 576 1.139058 ACCTAACATGGGATCTCGCAC 59.861 52.381 0.00 0.00 41.67 5.34
576 577 1.138859 CCTAACATGGGATCTCGCACA 59.861 52.381 0.00 0.00 41.67 4.57
577 578 2.419990 CCTAACATGGGATCTCGCACAA 60.420 50.000 0.00 0.00 41.67 3.33
578 579 1.742761 AACATGGGATCTCGCACAAG 58.257 50.000 0.00 0.00 41.67 3.16
579 580 0.615331 ACATGGGATCTCGCACAAGT 59.385 50.000 0.00 0.00 41.67 3.16
580 581 1.003580 ACATGGGATCTCGCACAAGTT 59.996 47.619 0.00 0.00 41.67 2.66
581 582 1.399440 CATGGGATCTCGCACAAGTTG 59.601 52.381 0.00 0.00 41.67 3.16
582 583 0.396435 TGGGATCTCGCACAAGTTGT 59.604 50.000 1.64 1.64 33.68 3.32
583 584 1.621317 TGGGATCTCGCACAAGTTGTA 59.379 47.619 8.49 0.00 33.68 2.41
584 585 2.236146 TGGGATCTCGCACAAGTTGTAT 59.764 45.455 8.49 0.00 33.68 2.29
585 586 2.609459 GGGATCTCGCACAAGTTGTATG 59.391 50.000 8.49 4.27 0.00 2.39
586 587 3.521560 GGATCTCGCACAAGTTGTATGA 58.478 45.455 8.49 8.53 0.00 2.15
587 588 3.553511 GGATCTCGCACAAGTTGTATGAG 59.446 47.826 21.94 21.94 34.21 2.90
588 589 3.934457 TCTCGCACAAGTTGTATGAGA 57.066 42.857 24.63 24.63 37.43 3.27
589 590 4.456280 TCTCGCACAAGTTGTATGAGAT 57.544 40.909 24.63 0.00 35.93 2.75
590 591 4.424626 TCTCGCACAAGTTGTATGAGATC 58.575 43.478 24.63 5.13 35.93 2.75
591 592 4.158579 TCTCGCACAAGTTGTATGAGATCT 59.841 41.667 24.63 0.00 35.93 2.75
592 593 4.424626 TCGCACAAGTTGTATGAGATCTC 58.575 43.478 16.21 16.21 0.00 2.75
593 594 4.082245 TCGCACAAGTTGTATGAGATCTCA 60.082 41.667 27.03 27.03 44.59 3.27
594 595 4.032217 CGCACAAGTTGTATGAGATCTCAC 59.968 45.833 27.37 16.08 43.11 3.51
595 596 4.931601 GCACAAGTTGTATGAGATCTCACA 59.068 41.667 27.37 18.49 43.11 3.58
596 597 5.583854 GCACAAGTTGTATGAGATCTCACAT 59.416 40.000 27.37 15.28 43.11 3.21
597 598 6.093219 GCACAAGTTGTATGAGATCTCACATT 59.907 38.462 27.37 14.54 43.11 2.71
598 599 7.361542 GCACAAGTTGTATGAGATCTCACATTT 60.362 37.037 27.37 14.18 43.11 2.32
599 600 9.154847 CACAAGTTGTATGAGATCTCACATTTA 57.845 33.333 27.37 13.13 43.11 1.40
600 601 9.376075 ACAAGTTGTATGAGATCTCACATTTAG 57.624 33.333 27.37 14.94 43.11 1.85
601 602 8.824781 CAAGTTGTATGAGATCTCACATTTAGG 58.175 37.037 27.37 10.30 43.11 2.69
602 603 8.083828 AGTTGTATGAGATCTCACATTTAGGT 57.916 34.615 27.37 11.62 43.11 3.08
603 604 7.984050 AGTTGTATGAGATCTCACATTTAGGTG 59.016 37.037 27.37 0.00 43.11 4.00
604 605 7.660030 TGTATGAGATCTCACATTTAGGTGA 57.340 36.000 27.37 0.25 45.06 4.02
614 615 6.078202 TCACATTTAGGTGAGATCGAGATC 57.922 41.667 5.00 5.00 42.56 2.75
615 616 5.594317 TCACATTTAGGTGAGATCGAGATCA 59.406 40.000 14.64 0.00 42.56 2.92
616 617 6.096846 TCACATTTAGGTGAGATCGAGATCAA 59.903 38.462 14.64 0.87 42.56 2.57
617 618 6.199908 CACATTTAGGTGAGATCGAGATCAAC 59.800 42.308 14.64 9.16 41.32 3.18
618 619 4.920640 TTAGGTGAGATCGAGATCAACC 57.079 45.455 20.94 20.94 42.46 3.77
619 620 1.678627 AGGTGAGATCGAGATCAACCG 59.321 52.381 21.65 0.00 44.69 4.44
620 621 1.269309 GGTGAGATCGAGATCAACCGG 60.269 57.143 14.64 0.00 40.22 5.28
621 622 1.676529 GTGAGATCGAGATCAACCGGA 59.323 52.381 9.46 0.00 40.22 5.14
622 623 2.099263 GTGAGATCGAGATCAACCGGAA 59.901 50.000 9.46 0.00 40.22 4.30
623 624 2.758423 TGAGATCGAGATCAACCGGAAA 59.242 45.455 9.46 0.00 40.22 3.13
624 625 3.194755 TGAGATCGAGATCAACCGGAAAA 59.805 43.478 9.46 0.00 40.22 2.29
625 626 4.181578 GAGATCGAGATCAACCGGAAAAA 58.818 43.478 9.46 0.00 40.22 1.94
685 686 8.542497 AATCATTTGACAACATTCATTTGAGG 57.458 30.769 0.00 0.00 0.00 3.86
686 687 7.053316 TCATTTGACAACATTCATTTGAGGT 57.947 32.000 0.00 0.00 0.00 3.85
687 688 8.175925 TCATTTGACAACATTCATTTGAGGTA 57.824 30.769 0.00 0.00 0.00 3.08
688 689 8.805175 TCATTTGACAACATTCATTTGAGGTAT 58.195 29.630 0.00 0.00 0.00 2.73
689 690 8.865978 CATTTGACAACATTCATTTGAGGTATG 58.134 33.333 0.00 0.00 0.00 2.39
690 691 7.523293 TTGACAACATTCATTTGAGGTATGT 57.477 32.000 0.00 0.00 0.00 2.29
691 692 8.628630 TTGACAACATTCATTTGAGGTATGTA 57.371 30.769 0.00 0.00 0.00 2.29
692 693 8.039603 TGACAACATTCATTTGAGGTATGTAC 57.960 34.615 0.00 0.00 0.00 2.90
693 694 7.663493 TGACAACATTCATTTGAGGTATGTACA 59.337 33.333 0.00 0.00 0.00 2.90
694 695 7.816640 ACAACATTCATTTGAGGTATGTACAC 58.183 34.615 0.00 0.00 0.00 2.90
695 696 7.446931 ACAACATTCATTTGAGGTATGTACACA 59.553 33.333 0.00 0.00 0.00 3.72
696 697 7.994425 ACATTCATTTGAGGTATGTACACAA 57.006 32.000 0.00 0.00 0.00 3.33
697 698 7.816640 ACATTCATTTGAGGTATGTACACAAC 58.183 34.615 0.00 0.00 0.00 3.32
698 699 7.446931 ACATTCATTTGAGGTATGTACACAACA 59.553 33.333 0.00 0.00 43.86 3.33
699 700 7.809546 TTCATTTGAGGTATGTACACAACAA 57.190 32.000 0.00 0.00 42.70 2.83
700 701 7.809546 TCATTTGAGGTATGTACACAACAAA 57.190 32.000 0.00 7.70 42.70 2.83
701 702 8.226819 TCATTTGAGGTATGTACACAACAAAA 57.773 30.769 0.00 0.00 42.70 2.44
702 703 8.687242 TCATTTGAGGTATGTACACAACAAAAA 58.313 29.630 0.00 0.00 42.70 1.94
703 704 9.474920 CATTTGAGGTATGTACACAACAAAAAT 57.525 29.630 0.00 0.00 42.70 1.82
704 705 9.691362 ATTTGAGGTATGTACACAACAAAAATC 57.309 29.630 0.00 0.00 42.70 2.17
705 706 7.809546 TGAGGTATGTACACAACAAAAATCA 57.190 32.000 0.00 0.00 42.70 2.57
706 707 7.870826 TGAGGTATGTACACAACAAAAATCAG 58.129 34.615 0.00 0.00 42.70 2.90
707 708 6.677913 AGGTATGTACACAACAAAAATCAGC 58.322 36.000 0.00 0.00 42.70 4.26
708 709 6.490040 AGGTATGTACACAACAAAAATCAGCT 59.510 34.615 0.00 0.00 42.70 4.24
709 710 6.801862 GGTATGTACACAACAAAAATCAGCTC 59.198 38.462 0.00 0.00 42.70 4.09
710 711 5.826601 TGTACACAACAAAAATCAGCTCA 57.173 34.783 0.00 0.00 34.29 4.26
711 712 5.820131 TGTACACAACAAAAATCAGCTCAG 58.180 37.500 0.00 0.00 34.29 3.35
712 713 5.588246 TGTACACAACAAAAATCAGCTCAGA 59.412 36.000 0.00 0.00 34.29 3.27
713 714 5.581126 ACACAACAAAAATCAGCTCAGAA 57.419 34.783 0.00 0.00 0.00 3.02
714 715 5.343249 ACACAACAAAAATCAGCTCAGAAC 58.657 37.500 0.00 0.00 0.00 3.01
715 716 5.126061 ACACAACAAAAATCAGCTCAGAACT 59.874 36.000 0.00 0.00 0.00 3.01
716 717 6.038356 CACAACAAAAATCAGCTCAGAACTT 58.962 36.000 0.00 0.00 0.00 2.66
717 718 6.020121 CACAACAAAAATCAGCTCAGAACTTG 60.020 38.462 0.00 0.00 0.00 3.16
718 719 6.127647 ACAACAAAAATCAGCTCAGAACTTGA 60.128 34.615 0.00 0.00 0.00 3.02
719 720 6.645790 ACAAAAATCAGCTCAGAACTTGAT 57.354 33.333 0.00 0.00 34.68 2.57
720 721 6.444633 ACAAAAATCAGCTCAGAACTTGATG 58.555 36.000 0.00 0.00 34.68 3.07
721 722 6.040166 ACAAAAATCAGCTCAGAACTTGATGT 59.960 34.615 0.00 0.00 34.68 3.06
722 723 7.229306 ACAAAAATCAGCTCAGAACTTGATGTA 59.771 33.333 0.00 0.00 34.68 2.29
723 724 6.734104 AAATCAGCTCAGAACTTGATGTAC 57.266 37.500 0.00 0.00 34.68 2.90
724 725 4.871933 TCAGCTCAGAACTTGATGTACA 57.128 40.909 0.00 0.00 34.68 2.90
725 726 5.411831 TCAGCTCAGAACTTGATGTACAT 57.588 39.130 8.43 8.43 34.68 2.29
726 727 5.798132 TCAGCTCAGAACTTGATGTACATT 58.202 37.500 10.30 0.00 34.68 2.71
727 728 5.640783 TCAGCTCAGAACTTGATGTACATTG 59.359 40.000 10.30 2.44 34.68 2.82
728 729 5.640783 CAGCTCAGAACTTGATGTACATTGA 59.359 40.000 10.30 6.87 34.68 2.57
729 730 5.873712 AGCTCAGAACTTGATGTACATTGAG 59.126 40.000 20.03 20.03 34.68 3.02
730 731 5.871524 GCTCAGAACTTGATGTACATTGAGA 59.128 40.000 25.23 10.24 34.68 3.27
731 732 6.035866 GCTCAGAACTTGATGTACATTGAGAG 59.964 42.308 25.23 16.35 34.68 3.20
732 733 7.232118 TCAGAACTTGATGTACATTGAGAGA 57.768 36.000 20.05 11.94 0.00 3.10
733 734 7.845037 TCAGAACTTGATGTACATTGAGAGAT 58.155 34.615 20.05 8.16 0.00 2.75
734 735 8.316946 TCAGAACTTGATGTACATTGAGAGATT 58.683 33.333 20.05 8.87 0.00 2.40
735 736 8.602328 CAGAACTTGATGTACATTGAGAGATTC 58.398 37.037 20.05 14.66 0.00 2.52
736 737 8.316946 AGAACTTGATGTACATTGAGAGATTCA 58.683 33.333 20.05 6.25 0.00 2.57
765 766 9.480053 AAAGACAAATTTGAATGTGAATAGTGG 57.520 29.630 24.64 0.00 0.00 4.00
766 767 7.092716 AGACAAATTTGAATGTGAATAGTGGC 58.907 34.615 24.64 0.00 0.00 5.01
767 768 6.757237 ACAAATTTGAATGTGAATAGTGGCA 58.243 32.000 24.64 0.00 0.00 4.92
768 769 7.215789 ACAAATTTGAATGTGAATAGTGGCAA 58.784 30.769 24.64 0.00 0.00 4.52
769 770 7.171337 ACAAATTTGAATGTGAATAGTGGCAAC 59.829 33.333 24.64 0.00 0.00 4.17
770 771 6.594788 ATTTGAATGTGAATAGTGGCAACT 57.405 33.333 0.00 0.00 40.67 3.16
771 772 6.403866 TTTGAATGTGAATAGTGGCAACTT 57.596 33.333 0.00 0.00 37.88 2.66
772 773 6.403866 TTGAATGTGAATAGTGGCAACTTT 57.596 33.333 0.00 0.00 37.88 2.66
773 774 5.771469 TGAATGTGAATAGTGGCAACTTTG 58.229 37.500 0.00 0.00 37.88 2.77
774 775 5.534278 TGAATGTGAATAGTGGCAACTTTGA 59.466 36.000 0.00 0.00 37.88 2.69
775 776 5.633830 ATGTGAATAGTGGCAACTTTGAG 57.366 39.130 0.00 0.00 37.88 3.02
776 777 4.460263 TGTGAATAGTGGCAACTTTGAGT 58.540 39.130 0.00 0.00 37.88 3.41
777 778 4.275689 TGTGAATAGTGGCAACTTTGAGTG 59.724 41.667 0.00 0.00 37.88 3.51
778 779 3.820467 TGAATAGTGGCAACTTTGAGTGG 59.180 43.478 0.00 0.00 37.88 4.00
779 780 3.788227 ATAGTGGCAACTTTGAGTGGA 57.212 42.857 0.00 0.00 37.88 4.02
780 781 2.664402 AGTGGCAACTTTGAGTGGAT 57.336 45.000 0.00 0.00 30.14 3.41
781 782 3.788227 AGTGGCAACTTTGAGTGGATA 57.212 42.857 0.00 0.00 30.14 2.59
782 783 4.098914 AGTGGCAACTTTGAGTGGATAA 57.901 40.909 0.00 0.00 30.14 1.75
783 784 4.666512 AGTGGCAACTTTGAGTGGATAAT 58.333 39.130 0.00 0.00 30.14 1.28
784 785 5.815581 AGTGGCAACTTTGAGTGGATAATA 58.184 37.500 0.00 0.00 30.14 0.98
785 786 5.648092 AGTGGCAACTTTGAGTGGATAATAC 59.352 40.000 0.00 0.00 30.14 1.89
786 787 5.648092 GTGGCAACTTTGAGTGGATAATACT 59.352 40.000 0.00 0.00 37.61 2.12
787 788 6.151144 GTGGCAACTTTGAGTGGATAATACTT 59.849 38.462 0.00 0.00 37.61 2.24
788 789 6.719370 TGGCAACTTTGAGTGGATAATACTTT 59.281 34.615 0.00 0.00 37.61 2.66
789 790 7.029563 GGCAACTTTGAGTGGATAATACTTTG 58.970 38.462 0.00 0.00 0.00 2.77
790 791 7.094377 GGCAACTTTGAGTGGATAATACTTTGA 60.094 37.037 0.00 0.00 0.00 2.69
791 792 7.750903 GCAACTTTGAGTGGATAATACTTTGAC 59.249 37.037 0.00 0.00 0.00 3.18
792 793 8.783093 CAACTTTGAGTGGATAATACTTTGACA 58.217 33.333 0.00 0.00 0.00 3.58
793 794 8.324163 ACTTTGAGTGGATAATACTTTGACAC 57.676 34.615 0.00 0.00 0.00 3.67
794 795 8.157476 ACTTTGAGTGGATAATACTTTGACACT 58.843 33.333 0.00 0.00 40.07 3.55
795 796 9.653287 CTTTGAGTGGATAATACTTTGACACTA 57.347 33.333 0.00 0.00 37.78 2.74
812 813 9.790389 TTTGACACTATTAACGTTTGATTTTGT 57.210 25.926 5.91 7.93 0.00 2.83
813 814 8.996988 TGACACTATTAACGTTTGATTTTGTC 57.003 30.769 5.91 15.39 0.00 3.18
814 815 8.832521 TGACACTATTAACGTTTGATTTTGTCT 58.167 29.630 21.96 6.24 31.76 3.41
815 816 9.659830 GACACTATTAACGTTTGATTTTGTCTT 57.340 29.630 5.91 0.00 0.00 3.01
961 962 7.921786 AAAATCGAACTCATTCCTAATGTGA 57.078 32.000 8.28 0.00 39.87 3.58
962 963 7.545362 AAATCGAACTCATTCCTAATGTGAG 57.455 36.000 8.28 0.00 43.76 3.51
963 964 5.914898 TCGAACTCATTCCTAATGTGAGA 57.085 39.130 8.44 3.40 41.38 3.27
964 965 6.471233 TCGAACTCATTCCTAATGTGAGAT 57.529 37.500 8.44 0.00 41.38 2.75
965 966 6.507900 TCGAACTCATTCCTAATGTGAGATC 58.492 40.000 8.44 5.43 41.38 2.75
966 967 6.322456 TCGAACTCATTCCTAATGTGAGATCT 59.678 38.462 8.44 0.00 41.38 2.75
967 968 6.640499 CGAACTCATTCCTAATGTGAGATCTC 59.360 42.308 16.21 16.21 41.38 2.75
968 969 7.429374 AACTCATTCCTAATGTGAGATCTCA 57.571 36.000 21.67 21.67 41.38 3.27
979 980 3.391506 TGAGATCTCACACCACACAAG 57.608 47.619 21.67 0.00 34.14 3.16
980 981 2.700371 TGAGATCTCACACCACACAAGT 59.300 45.455 21.67 0.00 34.14 3.16
981 982 3.243873 TGAGATCTCACACCACACAAGTC 60.244 47.826 21.67 0.00 34.14 3.01
982 983 2.968574 AGATCTCACACCACACAAGTCT 59.031 45.455 0.00 0.00 0.00 3.24
983 984 2.890808 TCTCACACCACACAAGTCTC 57.109 50.000 0.00 0.00 0.00 3.36
984 985 1.412710 TCTCACACCACACAAGTCTCC 59.587 52.381 0.00 0.00 0.00 3.71
985 986 0.468226 TCACACCACACAAGTCTCCC 59.532 55.000 0.00 0.00 0.00 4.30
986 987 0.535102 CACACCACACAAGTCTCCCC 60.535 60.000 0.00 0.00 0.00 4.81
987 988 1.073199 CACCACACAAGTCTCCCCC 59.927 63.158 0.00 0.00 0.00 5.40
988 989 1.073706 ACCACACAAGTCTCCCCCT 60.074 57.895 0.00 0.00 0.00 4.79
989 990 0.697854 ACCACACAAGTCTCCCCCTT 60.698 55.000 0.00 0.00 0.00 3.95
990 991 0.036875 CCACACAAGTCTCCCCCTTC 59.963 60.000 0.00 0.00 0.00 3.46
991 992 1.059913 CACACAAGTCTCCCCCTTCT 58.940 55.000 0.00 0.00 0.00 2.85
1063 1064 3.706373 GCCTCGCCTCCACCTTCA 61.706 66.667 0.00 0.00 0.00 3.02
1066 1067 3.316573 CTCGCCTCCACCTTCACCC 62.317 68.421 0.00 0.00 0.00 4.61
1116 1117 0.321210 ACGCGTTCATCCATGTCCAA 60.321 50.000 5.58 0.00 0.00 3.53
1476 1477 2.780643 CTGTTCGACAGCATGCCG 59.219 61.111 15.66 11.48 45.86 5.69
1486 1487 4.408821 GCATGCCGGTGAGGGACA 62.409 66.667 6.36 0.00 45.60 4.02
1643 1644 3.432588 CGTGGACGAGGCTCGAGT 61.433 66.667 40.35 21.71 43.74 4.18
1725 1726 1.115930 CCCGGAACCTCAGGATCGAT 61.116 60.000 0.73 0.00 33.29 3.59
1738 1739 3.989167 CAGGATCGATGAAGCTCTTGATC 59.011 47.826 0.54 10.57 31.27 2.92
1827 1828 5.192327 ACAAAGATTTGAAGAAGGCACAG 57.808 39.130 12.07 0.00 40.55 3.66
1830 1831 3.683802 AGATTTGAAGAAGGCACAGGAG 58.316 45.455 0.00 0.00 0.00 3.69
1852 1853 3.684788 GCTCTTTGACGAGATGCCTAAAA 59.315 43.478 0.00 0.00 32.74 1.52
1908 1909 2.086869 TGCTTGCAAGGTAATGAGAGC 58.913 47.619 27.10 10.52 33.22 4.09
1962 1963 2.420022 CGTTGATGGGATCAGACCAAAC 59.580 50.000 0.00 0.00 42.17 2.93
2016 2017 1.560860 GCAATATCGCCGGACTCAGC 61.561 60.000 5.05 0.00 0.00 4.26
2112 2113 8.247666 TCATGAATTTATATGGCAAATGTGGA 57.752 30.769 0.00 0.00 0.00 4.02
2284 2285 4.422073 AATGATGTCACATACGTGGGAT 57.578 40.909 0.00 0.00 40.54 3.85
2472 2473 5.522824 CGGTCTTAAACTTAAGCCTACATCC 59.477 44.000 1.29 0.00 39.90 3.51
2490 2491 1.749063 TCCAGTACTGTATGGAGTGCG 59.251 52.381 21.18 2.39 40.70 5.34
2583 2584 2.158696 AGAGCCTGATAATGCTGGAACC 60.159 50.000 0.00 0.00 38.11 3.62
2650 2651 1.731720 AGCAGCAAAGATTCGGTCTC 58.268 50.000 0.00 0.00 35.67 3.36
2662 2663 5.782047 AGATTCGGTCTCAGATGAATGATC 58.218 41.667 9.24 0.00 31.56 2.92
2682 2683 1.993370 CGAGGACTAAAGAAACAGCCG 59.007 52.381 0.00 0.00 0.00 5.52
2838 2839 1.027357 GGGACCACATGCAGCTTATG 58.973 55.000 6.24 6.24 0.00 1.90
2874 2875 6.095860 TGGTGGATCTTCAAGCATAATTTGAG 59.904 38.462 0.00 0.00 36.07 3.02
2913 2914 2.573462 TCCAGGATTTTGTCAGAGGGAG 59.427 50.000 0.00 0.00 0.00 4.30
2945 2946 3.440173 ACCACTAAATCAGACAATTGGCG 59.560 43.478 10.83 3.57 0.00 5.69
2975 2976 6.931838 TGTAGAGTTTAGACCTATGGTGTTG 58.068 40.000 0.00 0.00 35.25 3.33
2998 3017 1.353358 GTTACCCCAGGCTAAGTTGGT 59.647 52.381 0.00 0.00 32.40 3.67
3044 3063 1.402787 CAAACACCTGGGCTCTTGTT 58.597 50.000 0.00 0.00 33.59 2.83
3133 3153 4.841246 AGTCTTGACCTTTATCTCTGGTGT 59.159 41.667 0.00 0.00 33.74 4.16
3142 3162 6.656693 ACCTTTATCTCTGGTGTTTGAATCTG 59.343 38.462 0.00 0.00 32.16 2.90
3164 3184 1.118965 TTCTCTGGTTCACTGGCCGA 61.119 55.000 0.00 0.00 0.00 5.54
3278 3311 8.692110 TTGCTTGATGAATTACTAGCAAATTG 57.308 30.769 18.10 0.00 45.60 2.32
3297 3330 8.673711 GCAAATTGTCATATGTTCTGTACCTTA 58.326 33.333 1.90 0.00 0.00 2.69
3304 3337 9.250624 GTCATATGTTCTGTACCTTATCAGTTC 57.749 37.037 1.90 0.00 33.89 3.01
3318 3351 7.162082 CCTTATCAGTTCTGTAACTTGAGGTT 58.838 38.462 0.00 0.00 43.60 3.50
3319 3352 7.661847 CCTTATCAGTTCTGTAACTTGAGGTTT 59.338 37.037 0.00 0.00 43.60 3.27
3357 3390 2.391926 TTTTGGAAAAGGGGGACTCC 57.608 50.000 0.00 0.00 0.00 3.85
3371 3404 2.844362 CTCCCCGGCCTCTGCATA 60.844 66.667 0.00 0.00 40.13 3.14
3372 3405 2.366301 TCCCCGGCCTCTGCATAA 60.366 61.111 0.00 0.00 40.13 1.90
3373 3406 2.203209 CCCCGGCCTCTGCATAAC 60.203 66.667 0.00 0.00 40.13 1.89
3374 3407 2.746375 CCCCGGCCTCTGCATAACT 61.746 63.158 0.00 0.00 40.13 2.24
3375 3408 1.224592 CCCGGCCTCTGCATAACTT 59.775 57.895 0.00 0.00 40.13 2.66
3376 3409 1.097547 CCCGGCCTCTGCATAACTTG 61.098 60.000 0.00 0.00 40.13 3.16
3377 3410 0.107703 CCGGCCTCTGCATAACTTGA 60.108 55.000 0.00 0.00 40.13 3.02
3378 3411 1.293924 CGGCCTCTGCATAACTTGAG 58.706 55.000 0.00 0.00 40.13 3.02
3379 3412 1.673168 GGCCTCTGCATAACTTGAGG 58.327 55.000 12.01 12.01 46.38 3.86
3380 3413 1.065126 GGCCTCTGCATAACTTGAGGT 60.065 52.381 16.32 0.00 45.64 3.85
3381 3414 2.170607 GGCCTCTGCATAACTTGAGGTA 59.829 50.000 16.32 0.00 45.64 3.08
3389 3422 8.579850 TCTGCATAACTTGAGGTAAATTCATT 57.420 30.769 0.00 0.00 0.00 2.57
3453 3486 9.386122 AGATCAAACATACCTAGACCTCATATT 57.614 33.333 0.00 0.00 0.00 1.28
3456 3489 8.573885 TCAAACATACCTAGACCTCATATTACG 58.426 37.037 0.00 0.00 0.00 3.18
3499 3532 6.430925 TCCATGGTAATCAAGTTATAGCATGC 59.569 38.462 10.51 10.51 46.44 4.06
3707 3755 1.002468 ACTGCAGTGTTCACGCAATTC 60.002 47.619 20.97 0.82 34.75 2.17
3767 3818 4.222114 GTGTGACTCAACTTGCTATTTGC 58.778 43.478 0.00 0.00 43.25 3.68
3786 3837 1.068954 GCTACAGTTGCAGGCAAGAAC 60.069 52.381 6.99 0.00 36.52 3.01
3798 3849 2.108952 AGGCAAGAACTTTGGGATCACT 59.891 45.455 0.00 0.00 0.00 3.41
3814 3865 3.243359 TCACTCTCCCAAAAGGCAATT 57.757 42.857 0.00 0.00 34.51 2.32
3815 3866 3.575805 TCACTCTCCCAAAAGGCAATTT 58.424 40.909 0.00 0.00 34.51 1.82
3816 3867 3.321682 TCACTCTCCCAAAAGGCAATTTG 59.678 43.478 8.34 8.34 39.47 2.32
3842 3899 5.357742 TGTGAACTCTGCCATGTATGTAT 57.642 39.130 0.00 0.00 0.00 2.29
3843 3900 5.118286 TGTGAACTCTGCCATGTATGTATG 58.882 41.667 0.00 0.00 0.00 2.39
3844 3901 5.118990 GTGAACTCTGCCATGTATGTATGT 58.881 41.667 0.00 0.00 0.00 2.29
3845 3902 6.127196 TGTGAACTCTGCCATGTATGTATGTA 60.127 38.462 0.00 0.00 0.00 2.29
3846 3903 6.201044 GTGAACTCTGCCATGTATGTATGTAC 59.799 42.308 0.00 0.00 0.00 2.90
3861 3918 9.614792 GTATGTATGTACAGAGGAATTTCCTTT 57.385 33.333 18.89 10.94 41.18 3.11
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.563592 TCCAGAGTGTGTGAATTGAATGAT 58.436 37.500 0.00 0.00 0.00 2.45
1 2 4.971939 TCCAGAGTGTGTGAATTGAATGA 58.028 39.130 0.00 0.00 0.00 2.57
2 3 5.892160 ATCCAGAGTGTGTGAATTGAATG 57.108 39.130 0.00 0.00 0.00 2.67
3 4 6.906157 AAATCCAGAGTGTGTGAATTGAAT 57.094 33.333 0.00 0.00 0.00 2.57
4 5 6.320926 TGAAAATCCAGAGTGTGTGAATTGAA 59.679 34.615 0.00 0.00 0.00 2.69
5 6 5.827267 TGAAAATCCAGAGTGTGTGAATTGA 59.173 36.000 0.00 0.00 0.00 2.57
6 7 6.075762 TGAAAATCCAGAGTGTGTGAATTG 57.924 37.500 0.00 0.00 0.00 2.32
7 8 6.713762 TTGAAAATCCAGAGTGTGTGAATT 57.286 33.333 0.00 0.00 0.00 2.17
8 9 6.713762 TTTGAAAATCCAGAGTGTGTGAAT 57.286 33.333 0.00 0.00 0.00 2.57
9 10 6.320926 TGATTTGAAAATCCAGAGTGTGTGAA 59.679 34.615 12.11 0.00 43.19 3.18
10 11 5.827267 TGATTTGAAAATCCAGAGTGTGTGA 59.173 36.000 12.11 0.00 43.19 3.58
11 12 6.075762 TGATTTGAAAATCCAGAGTGTGTG 57.924 37.500 12.11 0.00 43.19 3.82
12 13 5.278660 GCTGATTTGAAAATCCAGAGTGTGT 60.279 40.000 12.11 0.00 43.19 3.72
13 14 5.159209 GCTGATTTGAAAATCCAGAGTGTG 58.841 41.667 12.11 0.00 43.19 3.82
14 15 4.219288 GGCTGATTTGAAAATCCAGAGTGT 59.781 41.667 12.11 0.00 43.19 3.55
15 16 4.461781 AGGCTGATTTGAAAATCCAGAGTG 59.538 41.667 12.11 0.00 43.19 3.51
16 17 4.670765 AGGCTGATTTGAAAATCCAGAGT 58.329 39.130 12.11 1.11 43.19 3.24
17 18 5.408356 CAAGGCTGATTTGAAAATCCAGAG 58.592 41.667 12.11 5.58 43.19 3.35
18 19 4.322198 GCAAGGCTGATTTGAAAATCCAGA 60.322 41.667 12.11 0.00 43.19 3.86
19 20 3.930848 GCAAGGCTGATTTGAAAATCCAG 59.069 43.478 12.11 10.43 43.19 3.86
20 21 3.579586 AGCAAGGCTGATTTGAAAATCCA 59.420 39.130 12.11 1.96 43.19 3.41
21 22 4.198028 AGCAAGGCTGATTTGAAAATCC 57.802 40.909 12.11 0.00 43.19 3.01
22 23 5.232463 TCAAGCAAGGCTGATTTGAAAATC 58.768 37.500 8.53 8.53 43.91 2.17
23 24 5.217978 TCAAGCAAGGCTGATTTGAAAAT 57.782 34.783 5.63 0.00 39.62 1.82
24 25 4.669206 TCAAGCAAGGCTGATTTGAAAA 57.331 36.364 5.63 0.00 39.62 2.29
25 26 4.877378 ATCAAGCAAGGCTGATTTGAAA 57.123 36.364 10.55 0.00 39.62 2.69
26 27 5.571784 CTATCAAGCAAGGCTGATTTGAA 57.428 39.130 10.55 2.83 39.62 2.69
41 42 3.388308 CCCGATTCAGTCTGCTATCAAG 58.612 50.000 12.45 5.72 0.00 3.02
42 43 2.103094 CCCCGATTCAGTCTGCTATCAA 59.897 50.000 12.45 0.00 0.00 2.57
43 44 1.688735 CCCCGATTCAGTCTGCTATCA 59.311 52.381 12.45 0.00 0.00 2.15
44 45 1.689273 ACCCCGATTCAGTCTGCTATC 59.311 52.381 0.00 0.30 0.00 2.08
45 46 1.794714 ACCCCGATTCAGTCTGCTAT 58.205 50.000 0.00 0.00 0.00 2.97
46 47 1.480954 GAACCCCGATTCAGTCTGCTA 59.519 52.381 0.00 0.00 0.00 3.49
47 48 0.250513 GAACCCCGATTCAGTCTGCT 59.749 55.000 0.00 0.00 0.00 4.24
48 49 0.744771 GGAACCCCGATTCAGTCTGC 60.745 60.000 0.00 0.00 0.00 4.26
49 50 0.613260 TGGAACCCCGATTCAGTCTG 59.387 55.000 0.00 0.00 34.29 3.51
50 51 0.613777 GTGGAACCCCGATTCAGTCT 59.386 55.000 0.00 0.00 34.29 3.24
51 52 0.739813 CGTGGAACCCCGATTCAGTC 60.740 60.000 0.00 0.00 34.29 3.51
52 53 1.295423 CGTGGAACCCCGATTCAGT 59.705 57.895 0.00 0.00 34.29 3.41
53 54 2.106683 GCGTGGAACCCCGATTCAG 61.107 63.158 0.00 0.00 34.29 3.02
54 55 1.259142 TAGCGTGGAACCCCGATTCA 61.259 55.000 0.00 0.00 34.29 2.57
55 56 0.106149 ATAGCGTGGAACCCCGATTC 59.894 55.000 0.00 0.00 34.29 2.52
56 57 0.106149 GATAGCGTGGAACCCCGATT 59.894 55.000 0.00 0.00 34.29 3.34
57 58 1.746517 GATAGCGTGGAACCCCGAT 59.253 57.895 0.00 0.00 34.29 4.18
58 59 2.777972 CGATAGCGTGGAACCCCGA 61.778 63.158 0.00 0.00 34.29 5.14
59 60 2.279252 CGATAGCGTGGAACCCCG 60.279 66.667 0.00 0.00 34.29 5.73
60 61 2.108362 CCGATAGCGTGGAACCCC 59.892 66.667 0.00 0.00 35.23 4.95
61 62 2.588034 GCCGATAGCGTGGAACCC 60.588 66.667 0.00 0.00 35.23 4.11
70 71 0.734253 CCTACATGCGAGCCGATAGC 60.734 60.000 0.00 0.00 44.25 2.97
71 72 0.734253 GCCTACATGCGAGCCGATAG 60.734 60.000 0.00 0.00 0.00 2.08
72 73 1.289066 GCCTACATGCGAGCCGATA 59.711 57.895 0.00 0.00 0.00 2.92
73 74 2.029666 GCCTACATGCGAGCCGAT 59.970 61.111 0.00 0.00 0.00 4.18
74 75 4.221422 GGCCTACATGCGAGCCGA 62.221 66.667 0.00 0.00 35.30 5.54
76 77 2.590007 CTGGCCTACATGCGAGCC 60.590 66.667 3.32 12.35 45.96 4.70
77 78 1.593750 CTCTGGCCTACATGCGAGC 60.594 63.158 3.32 0.00 37.05 5.03
78 79 1.068753 CCTCTGGCCTACATGCGAG 59.931 63.158 3.32 0.00 38.31 5.03
79 80 1.264749 AACCTCTGGCCTACATGCGA 61.265 55.000 3.32 0.00 0.00 5.10
80 81 0.811616 GAACCTCTGGCCTACATGCG 60.812 60.000 3.32 0.00 0.00 4.73
81 82 0.464554 GGAACCTCTGGCCTACATGC 60.465 60.000 3.32 0.00 0.00 4.06
82 83 0.911769 TGGAACCTCTGGCCTACATG 59.088 55.000 3.32 0.00 0.00 3.21
83 84 1.492176 CATGGAACCTCTGGCCTACAT 59.508 52.381 3.32 0.00 0.00 2.29
84 85 0.911769 CATGGAACCTCTGGCCTACA 59.088 55.000 3.32 0.00 0.00 2.74
85 86 0.912486 ACATGGAACCTCTGGCCTAC 59.088 55.000 3.32 0.00 0.00 3.18
86 87 1.281867 CAACATGGAACCTCTGGCCTA 59.718 52.381 3.32 0.00 0.00 3.93
87 88 0.038744 CAACATGGAACCTCTGGCCT 59.961 55.000 3.32 0.00 0.00 5.19
88 89 0.967380 CCAACATGGAACCTCTGGCC 60.967 60.000 0.00 0.00 40.96 5.36
89 90 0.251341 ACCAACATGGAACCTCTGGC 60.251 55.000 2.85 0.00 40.96 4.85
90 91 1.888512 CAACCAACATGGAACCTCTGG 59.111 52.381 2.85 0.00 40.96 3.86
91 92 2.554032 GACAACCAACATGGAACCTCTG 59.446 50.000 2.85 0.00 40.96 3.35
92 93 2.489073 GGACAACCAACATGGAACCTCT 60.489 50.000 2.85 0.00 40.96 3.69
93 94 1.886542 GGACAACCAACATGGAACCTC 59.113 52.381 2.85 0.00 40.96 3.85
94 95 1.817740 CGGACAACCAACATGGAACCT 60.818 52.381 2.85 0.00 40.96 3.50
95 96 0.596082 CGGACAACCAACATGGAACC 59.404 55.000 2.85 0.62 40.96 3.62
96 97 1.265905 GTCGGACAACCAACATGGAAC 59.734 52.381 2.62 0.00 40.96 3.62
97 98 1.600023 GTCGGACAACCAACATGGAA 58.400 50.000 2.62 0.00 40.96 3.53
98 99 0.601576 CGTCGGACAACCAACATGGA 60.602 55.000 9.10 0.00 40.96 3.41
99 100 0.882927 ACGTCGGACAACCAACATGG 60.883 55.000 9.10 0.00 45.02 3.66
100 101 0.234625 CACGTCGGACAACCAACATG 59.765 55.000 9.10 0.00 35.59 3.21
101 102 0.882927 CCACGTCGGACAACCAACAT 60.883 55.000 9.10 0.00 36.56 2.71
102 103 1.521906 CCACGTCGGACAACCAACA 60.522 57.895 9.10 0.00 36.56 3.33
103 104 2.888998 GCCACGTCGGACAACCAAC 61.889 63.158 9.10 0.00 36.56 3.77
104 105 2.589442 GCCACGTCGGACAACCAA 60.589 61.111 9.10 0.00 36.56 3.67
105 106 4.953868 CGCCACGTCGGACAACCA 62.954 66.667 9.10 0.00 36.56 3.67
116 117 3.894547 AAAGGGTGCTACCGCCACG 62.895 63.158 0.00 0.00 43.62 4.94
117 118 2.033602 AAAGGGTGCTACCGCCAC 59.966 61.111 0.00 0.00 43.62 5.01
118 119 0.905809 TAGAAAGGGTGCTACCGCCA 60.906 55.000 0.00 0.00 43.62 5.69
119 120 0.251073 TTAGAAAGGGTGCTACCGCC 59.749 55.000 0.00 0.00 39.83 6.13
120 121 2.103537 TTTAGAAAGGGTGCTACCGC 57.896 50.000 0.00 0.00 39.83 5.68
121 122 2.864343 CGATTTAGAAAGGGTGCTACCG 59.136 50.000 0.00 0.00 39.83 4.02
122 123 3.203716 CCGATTTAGAAAGGGTGCTACC 58.796 50.000 0.00 0.00 37.60 3.18
123 124 3.203716 CCCGATTTAGAAAGGGTGCTAC 58.796 50.000 0.00 0.00 39.05 3.58
124 125 2.171870 CCCCGATTTAGAAAGGGTGCTA 59.828 50.000 0.00 0.00 42.26 3.49
125 126 1.064685 CCCCGATTTAGAAAGGGTGCT 60.065 52.381 0.00 0.00 42.26 4.40
126 127 1.389555 CCCCGATTTAGAAAGGGTGC 58.610 55.000 0.00 0.00 42.26 5.01
129 130 3.279434 CTGAACCCCGATTTAGAAAGGG 58.721 50.000 0.00 0.00 43.88 3.95
130 131 3.054655 TCCTGAACCCCGATTTAGAAAGG 60.055 47.826 0.00 0.00 0.00 3.11
131 132 4.192317 CTCCTGAACCCCGATTTAGAAAG 58.808 47.826 0.00 0.00 0.00 2.62
132 133 3.585732 ACTCCTGAACCCCGATTTAGAAA 59.414 43.478 0.00 0.00 0.00 2.52
133 134 3.178865 ACTCCTGAACCCCGATTTAGAA 58.821 45.455 0.00 0.00 0.00 2.10
134 135 2.764572 GACTCCTGAACCCCGATTTAGA 59.235 50.000 0.00 0.00 0.00 2.10
135 136 2.481449 CGACTCCTGAACCCCGATTTAG 60.481 54.545 0.00 0.00 0.00 1.85
136 137 1.479323 CGACTCCTGAACCCCGATTTA 59.521 52.381 0.00 0.00 0.00 1.40
137 138 0.249398 CGACTCCTGAACCCCGATTT 59.751 55.000 0.00 0.00 0.00 2.17
138 139 1.898154 CGACTCCTGAACCCCGATT 59.102 57.895 0.00 0.00 0.00 3.34
139 140 2.722201 GCGACTCCTGAACCCCGAT 61.722 63.158 0.00 0.00 0.00 4.18
140 141 3.379445 GCGACTCCTGAACCCCGA 61.379 66.667 0.00 0.00 0.00 5.14
141 142 3.382832 AGCGACTCCTGAACCCCG 61.383 66.667 0.00 0.00 0.00 5.73
142 143 2.266055 CAGCGACTCCTGAACCCC 59.734 66.667 0.00 0.00 34.77 4.95
143 144 2.435059 GCAGCGACTCCTGAACCC 60.435 66.667 0.00 0.00 34.77 4.11
144 145 2.435059 GGCAGCGACTCCTGAACC 60.435 66.667 0.00 0.00 34.77 3.62
145 146 1.446966 GAGGCAGCGACTCCTGAAC 60.447 63.158 0.49 0.00 34.77 3.18
146 147 1.188219 AAGAGGCAGCGACTCCTGAA 61.188 55.000 7.65 0.00 38.74 3.02
147 148 1.188219 AAAGAGGCAGCGACTCCTGA 61.188 55.000 7.65 0.00 38.74 3.86
148 149 0.739112 GAAAGAGGCAGCGACTCCTG 60.739 60.000 7.65 0.00 38.74 3.86
149 150 0.902516 AGAAAGAGGCAGCGACTCCT 60.903 55.000 7.65 0.00 38.74 3.69
150 151 0.818296 TAGAAAGAGGCAGCGACTCC 59.182 55.000 7.65 0.00 38.74 3.85
151 152 1.202359 CCTAGAAAGAGGCAGCGACTC 60.202 57.143 3.54 3.54 38.12 3.36
152 153 0.820871 CCTAGAAAGAGGCAGCGACT 59.179 55.000 0.00 0.00 0.00 4.18
153 154 0.179097 CCCTAGAAAGAGGCAGCGAC 60.179 60.000 0.00 0.00 35.00 5.19
154 155 1.330655 CCCCTAGAAAGAGGCAGCGA 61.331 60.000 0.00 0.00 35.00 4.93
155 156 1.144936 CCCCTAGAAAGAGGCAGCG 59.855 63.158 0.00 0.00 35.00 5.18
156 157 0.983378 TCCCCCTAGAAAGAGGCAGC 60.983 60.000 0.00 0.00 35.00 5.25
157 158 1.127343 CTCCCCCTAGAAAGAGGCAG 58.873 60.000 0.00 0.00 35.00 4.85
158 159 0.716591 TCTCCCCCTAGAAAGAGGCA 59.283 55.000 0.00 0.00 35.00 4.75
159 160 1.124780 GTCTCCCCCTAGAAAGAGGC 58.875 60.000 0.00 0.00 35.00 4.70
160 161 2.769095 CAAGTCTCCCCCTAGAAAGAGG 59.231 54.545 0.00 0.00 36.23 3.69
161 162 3.445987 ACAAGTCTCCCCCTAGAAAGAG 58.554 50.000 0.00 0.00 0.00 2.85
162 163 3.562108 ACAAGTCTCCCCCTAGAAAGA 57.438 47.619 0.00 0.00 0.00 2.52
163 164 4.962995 TCATACAAGTCTCCCCCTAGAAAG 59.037 45.833 0.00 0.00 0.00 2.62
164 165 4.955335 TCATACAAGTCTCCCCCTAGAAA 58.045 43.478 0.00 0.00 0.00 2.52
165 166 4.620086 TCATACAAGTCTCCCCCTAGAA 57.380 45.455 0.00 0.00 0.00 2.10
166 167 4.834406 ATCATACAAGTCTCCCCCTAGA 57.166 45.455 0.00 0.00 0.00 2.43
167 168 6.498538 AGATATCATACAAGTCTCCCCCTAG 58.501 44.000 5.32 0.00 0.00 3.02
168 169 6.046762 TGAGATATCATACAAGTCTCCCCCTA 59.953 42.308 5.32 0.00 35.58 3.53
169 170 5.162826 TGAGATATCATACAAGTCTCCCCCT 60.163 44.000 5.32 0.00 35.58 4.79
170 171 5.046950 GTGAGATATCATACAAGTCTCCCCC 60.047 48.000 5.32 0.00 35.58 5.40
171 172 5.540337 TGTGAGATATCATACAAGTCTCCCC 59.460 44.000 5.32 0.00 35.58 4.81
172 173 6.656632 TGTGAGATATCATACAAGTCTCCC 57.343 41.667 5.32 0.00 35.58 4.30
176 177 9.988815 ACCTAAATGTGAGATATCATACAAGTC 57.011 33.333 13.76 0.00 0.00 3.01
177 178 9.770097 CACCTAAATGTGAGATATCATACAAGT 57.230 33.333 13.76 8.74 38.55 3.16
178 179 9.987272 TCACCTAAATGTGAGATATCATACAAG 57.013 33.333 13.76 8.49 40.22 3.16
191 192 2.425668 TCGCGATCTCACCTAAATGTGA 59.574 45.455 3.71 0.00 42.75 3.58
192 193 2.791560 CTCGCGATCTCACCTAAATGTG 59.208 50.000 10.36 0.00 37.59 3.21
193 194 2.688446 TCTCGCGATCTCACCTAAATGT 59.312 45.455 10.36 0.00 0.00 2.71
194 195 3.355626 TCTCGCGATCTCACCTAAATG 57.644 47.619 10.36 0.00 0.00 2.32
195 196 3.570125 TGATCTCGCGATCTCACCTAAAT 59.430 43.478 10.36 0.00 45.10 1.40
196 197 2.949644 TGATCTCGCGATCTCACCTAAA 59.050 45.455 10.36 0.00 45.10 1.85
197 198 2.572290 TGATCTCGCGATCTCACCTAA 58.428 47.619 10.36 0.00 45.10 2.69
198 199 2.256117 TGATCTCGCGATCTCACCTA 57.744 50.000 10.36 0.00 45.10 3.08
199 200 1.393603 TTGATCTCGCGATCTCACCT 58.606 50.000 10.36 0.00 45.10 4.00
200 201 2.030363 AGATTGATCTCGCGATCTCACC 60.030 50.000 10.36 9.84 45.10 4.02
201 202 2.979151 CAGATTGATCTCGCGATCTCAC 59.021 50.000 10.36 5.02 45.10 3.51
202 203 2.880890 TCAGATTGATCTCGCGATCTCA 59.119 45.455 10.36 13.07 45.10 3.27
203 204 3.550950 TCAGATTGATCTCGCGATCTC 57.449 47.619 10.36 10.29 45.10 2.75
204 205 3.998099 TTCAGATTGATCTCGCGATCT 57.002 42.857 10.36 5.38 45.10 2.75
205 206 4.505922 ACTTTTCAGATTGATCTCGCGATC 59.494 41.667 10.36 5.91 45.09 3.69
206 207 4.437239 ACTTTTCAGATTGATCTCGCGAT 58.563 39.130 10.36 0.00 34.22 4.58
207 208 3.849911 ACTTTTCAGATTGATCTCGCGA 58.150 40.909 9.26 9.26 34.22 5.87
208 209 4.091945 TGAACTTTTCAGATTGATCTCGCG 59.908 41.667 0.00 0.00 34.22 5.87
209 210 5.536554 TGAACTTTTCAGATTGATCTCGC 57.463 39.130 0.00 0.00 34.22 5.03
263 264 9.295825 AGACATACCTAAATGAATGTTGTCAAA 57.704 29.630 0.00 0.00 34.79 2.69
264 265 8.862325 AGACATACCTAAATGAATGTTGTCAA 57.138 30.769 0.00 0.00 34.79 3.18
265 266 9.378551 GTAGACATACCTAAATGAATGTTGTCA 57.621 33.333 0.00 0.00 34.79 3.58
266 267 9.378551 TGTAGACATACCTAAATGAATGTTGTC 57.621 33.333 0.00 0.00 32.87 3.18
267 268 9.733556 TTGTAGACATACCTAAATGAATGTTGT 57.266 29.630 0.00 0.00 32.87 3.32
268 269 9.988350 GTTGTAGACATACCTAAATGAATGTTG 57.012 33.333 0.00 0.00 32.87 3.33
269 270 9.959721 AGTTGTAGACATACCTAAATGAATGTT 57.040 29.630 0.00 0.00 32.87 2.71
299 300 6.645790 ACATCAAGTTCTGAGCTGATTTTT 57.354 33.333 0.00 0.00 37.52 1.94
300 301 6.712095 TGTACATCAAGTTCTGAGCTGATTTT 59.288 34.615 0.00 0.00 37.52 1.82
301 302 6.233434 TGTACATCAAGTTCTGAGCTGATTT 58.767 36.000 0.00 0.00 37.52 2.17
302 303 5.798132 TGTACATCAAGTTCTGAGCTGATT 58.202 37.500 0.00 0.00 37.52 2.57
303 304 5.411831 TGTACATCAAGTTCTGAGCTGAT 57.588 39.130 0.00 0.00 37.52 2.90
304 305 4.871933 TGTACATCAAGTTCTGAGCTGA 57.128 40.909 0.00 0.00 37.52 4.26
305 306 6.492007 AAATGTACATCAAGTTCTGAGCTG 57.508 37.500 9.23 0.00 37.52 4.24
306 307 7.615403 TCTAAATGTACATCAAGTTCTGAGCT 58.385 34.615 9.23 0.00 37.52 4.09
307 308 7.761704 TCTCTAAATGTACATCAAGTTCTGAGC 59.238 37.037 9.23 0.00 37.52 4.26
308 309 9.814899 ATCTCTAAATGTACATCAAGTTCTGAG 57.185 33.333 9.23 10.50 37.52 3.35
340 341 9.480053 CCACTATTCACATTCAAATTTGTCTTT 57.520 29.630 17.47 0.00 0.00 2.52
341 342 7.599998 GCCACTATTCACATTCAAATTTGTCTT 59.400 33.333 17.47 1.76 0.00 3.01
342 343 7.092716 GCCACTATTCACATTCAAATTTGTCT 58.907 34.615 17.47 4.00 0.00 3.41
343 344 6.867816 TGCCACTATTCACATTCAAATTTGTC 59.132 34.615 17.47 0.00 0.00 3.18
344 345 6.757237 TGCCACTATTCACATTCAAATTTGT 58.243 32.000 17.47 0.00 0.00 2.83
345 346 6.183360 GCTGCCACTATTCACATTCAAATTTG 60.183 38.462 12.15 12.15 0.00 2.32
346 347 5.870978 GCTGCCACTATTCACATTCAAATTT 59.129 36.000 0.00 0.00 0.00 1.82
347 348 5.186409 AGCTGCCACTATTCACATTCAAATT 59.814 36.000 0.00 0.00 0.00 1.82
348 349 4.708421 AGCTGCCACTATTCACATTCAAAT 59.292 37.500 0.00 0.00 0.00 2.32
349 350 4.081406 AGCTGCCACTATTCACATTCAAA 58.919 39.130 0.00 0.00 0.00 2.69
350 351 3.689347 AGCTGCCACTATTCACATTCAA 58.311 40.909 0.00 0.00 0.00 2.69
351 352 3.354948 AGCTGCCACTATTCACATTCA 57.645 42.857 0.00 0.00 0.00 2.57
352 353 4.156556 TCAAAGCTGCCACTATTCACATTC 59.843 41.667 0.00 0.00 0.00 2.67
353 354 4.081406 TCAAAGCTGCCACTATTCACATT 58.919 39.130 0.00 0.00 0.00 2.71
354 355 3.689347 TCAAAGCTGCCACTATTCACAT 58.311 40.909 0.00 0.00 0.00 3.21
355 356 3.076621 CTCAAAGCTGCCACTATTCACA 58.923 45.455 0.00 0.00 0.00 3.58
356 357 3.077359 ACTCAAAGCTGCCACTATTCAC 58.923 45.455 0.00 0.00 0.00 3.18
357 358 3.076621 CACTCAAAGCTGCCACTATTCA 58.923 45.455 0.00 0.00 0.00 2.57
358 359 3.338249 TCACTCAAAGCTGCCACTATTC 58.662 45.455 0.00 0.00 0.00 1.75
359 360 3.423539 TCACTCAAAGCTGCCACTATT 57.576 42.857 0.00 0.00 0.00 1.73
360 361 3.423539 TTCACTCAAAGCTGCCACTAT 57.576 42.857 0.00 0.00 0.00 2.12
361 362 2.928801 TTCACTCAAAGCTGCCACTA 57.071 45.000 0.00 0.00 0.00 2.74
362 363 2.283145 ATTCACTCAAAGCTGCCACT 57.717 45.000 0.00 0.00 0.00 4.00
363 364 3.077359 AGTATTCACTCAAAGCTGCCAC 58.923 45.455 0.00 0.00 0.00 5.01
364 365 3.423539 AGTATTCACTCAAAGCTGCCA 57.576 42.857 0.00 0.00 0.00 4.92
365 366 4.216257 TCAAAGTATTCACTCAAAGCTGCC 59.784 41.667 0.00 0.00 32.29 4.85
366 367 5.149977 GTCAAAGTATTCACTCAAAGCTGC 58.850 41.667 0.00 0.00 32.29 5.25
367 368 6.017605 AGTGTCAAAGTATTCACTCAAAGCTG 60.018 38.462 0.00 0.00 36.59 4.24
368 369 6.058183 AGTGTCAAAGTATTCACTCAAAGCT 58.942 36.000 0.00 0.00 36.59 3.74
369 370 6.305693 AGTGTCAAAGTATTCACTCAAAGC 57.694 37.500 0.00 0.00 36.59 3.51
378 379 8.492748 TCAAACGTGAATAGTGTCAAAGTATTC 58.507 33.333 0.00 0.00 45.68 1.75
379 380 8.373048 TCAAACGTGAATAGTGTCAAAGTATT 57.627 30.769 0.00 0.00 37.15 1.89
380 381 7.956420 TCAAACGTGAATAGTGTCAAAGTAT 57.044 32.000 0.00 0.00 0.00 2.12
381 382 7.956420 ATCAAACGTGAATAGTGTCAAAGTA 57.044 32.000 0.00 0.00 37.30 2.24
382 383 6.861065 ATCAAACGTGAATAGTGTCAAAGT 57.139 33.333 0.00 0.00 37.30 2.66
383 384 8.471457 CAAAATCAAACGTGAATAGTGTCAAAG 58.529 33.333 0.00 0.00 37.30 2.77
384 385 7.971168 ACAAAATCAAACGTGAATAGTGTCAAA 59.029 29.630 0.00 0.00 37.30 2.69
385 386 7.476667 ACAAAATCAAACGTGAATAGTGTCAA 58.523 30.769 0.00 0.00 37.30 3.18
386 387 7.011950 AGACAAAATCAAACGTGAATAGTGTCA 59.988 33.333 14.74 0.00 37.57 3.58
387 388 7.352739 AGACAAAATCAAACGTGAATAGTGTC 58.647 34.615 0.00 0.00 37.30 3.67
388 389 7.259290 AGACAAAATCAAACGTGAATAGTGT 57.741 32.000 0.00 0.00 37.30 3.55
389 390 8.560576 AAAGACAAAATCAAACGTGAATAGTG 57.439 30.769 0.00 0.00 37.30 2.74
393 394 9.528018 ACATAAAAGACAAAATCAAACGTGAAT 57.472 25.926 0.00 0.00 37.30 2.57
394 395 8.918961 ACATAAAAGACAAAATCAAACGTGAA 57.081 26.923 0.00 0.00 37.30 3.18
395 396 8.918961 AACATAAAAGACAAAATCAAACGTGA 57.081 26.923 0.00 0.00 38.41 4.35
396 397 9.618410 GAAACATAAAAGACAAAATCAAACGTG 57.382 29.630 0.00 0.00 0.00 4.49
397 398 9.581099 AGAAACATAAAAGACAAAATCAAACGT 57.419 25.926 0.00 0.00 0.00 3.99
529 530 9.948964 TGAGATGAATGAGATTGTCTTTTCTAA 57.051 29.630 0.00 0.00 0.00 2.10
530 531 9.376075 GTGAGATGAATGAGATTGTCTTTTCTA 57.624 33.333 0.00 0.00 0.00 2.10
531 532 7.336427 GGTGAGATGAATGAGATTGTCTTTTCT 59.664 37.037 0.00 0.00 0.00 2.52
532 533 7.336427 AGGTGAGATGAATGAGATTGTCTTTTC 59.664 37.037 0.00 0.00 0.00 2.29
533 534 7.173722 AGGTGAGATGAATGAGATTGTCTTTT 58.826 34.615 0.00 0.00 0.00 2.27
534 535 6.719301 AGGTGAGATGAATGAGATTGTCTTT 58.281 36.000 0.00 0.00 0.00 2.52
535 536 6.310764 AGGTGAGATGAATGAGATTGTCTT 57.689 37.500 0.00 0.00 0.00 3.01
536 537 5.954153 AGGTGAGATGAATGAGATTGTCT 57.046 39.130 0.00 0.00 0.00 3.41
537 538 7.044181 TGTTAGGTGAGATGAATGAGATTGTC 58.956 38.462 0.00 0.00 0.00 3.18
538 539 6.950842 TGTTAGGTGAGATGAATGAGATTGT 58.049 36.000 0.00 0.00 0.00 2.71
539 540 7.041303 CCATGTTAGGTGAGATGAATGAGATTG 60.041 40.741 0.00 0.00 0.00 2.67
540 541 6.996879 CCATGTTAGGTGAGATGAATGAGATT 59.003 38.462 0.00 0.00 0.00 2.40
541 542 6.465464 CCCATGTTAGGTGAGATGAATGAGAT 60.465 42.308 0.00 0.00 0.00 2.75
542 543 5.163269 CCCATGTTAGGTGAGATGAATGAGA 60.163 44.000 0.00 0.00 0.00 3.27
543 544 5.061853 CCCATGTTAGGTGAGATGAATGAG 58.938 45.833 0.00 0.00 0.00 2.90
544 545 4.721274 TCCCATGTTAGGTGAGATGAATGA 59.279 41.667 0.00 0.00 0.00 2.57
545 546 5.039920 TCCCATGTTAGGTGAGATGAATG 57.960 43.478 0.00 0.00 0.00 2.67
546 547 5.610132 AGATCCCATGTTAGGTGAGATGAAT 59.390 40.000 0.00 0.00 0.00 2.57
547 548 4.971282 AGATCCCATGTTAGGTGAGATGAA 59.029 41.667 0.00 0.00 0.00 2.57
548 549 4.560739 AGATCCCATGTTAGGTGAGATGA 58.439 43.478 0.00 0.00 0.00 2.92
549 550 4.560311 CGAGATCCCATGTTAGGTGAGATG 60.560 50.000 0.00 0.00 0.00 2.90
550 551 3.576118 CGAGATCCCATGTTAGGTGAGAT 59.424 47.826 0.00 0.00 0.00 2.75
551 552 2.959030 CGAGATCCCATGTTAGGTGAGA 59.041 50.000 0.00 0.00 0.00 3.27
552 553 2.546795 GCGAGATCCCATGTTAGGTGAG 60.547 54.545 0.00 0.00 0.00 3.51
553 554 1.412710 GCGAGATCCCATGTTAGGTGA 59.587 52.381 0.00 0.00 0.00 4.02
554 555 1.138859 TGCGAGATCCCATGTTAGGTG 59.861 52.381 0.00 0.00 0.00 4.00
555 556 1.139058 GTGCGAGATCCCATGTTAGGT 59.861 52.381 0.00 0.00 0.00 3.08
556 557 1.138859 TGTGCGAGATCCCATGTTAGG 59.861 52.381 0.00 0.00 0.00 2.69
557 558 2.602257 TGTGCGAGATCCCATGTTAG 57.398 50.000 0.00 0.00 0.00 2.34
558 559 2.236146 ACTTGTGCGAGATCCCATGTTA 59.764 45.455 0.00 0.00 0.00 2.41
559 560 1.003580 ACTTGTGCGAGATCCCATGTT 59.996 47.619 0.00 0.00 0.00 2.71
560 561 0.615331 ACTTGTGCGAGATCCCATGT 59.385 50.000 0.00 0.00 0.00 3.21
561 562 1.399440 CAACTTGTGCGAGATCCCATG 59.601 52.381 0.00 0.00 0.00 3.66
562 563 1.003580 ACAACTTGTGCGAGATCCCAT 59.996 47.619 0.00 0.00 0.00 4.00
563 564 0.396435 ACAACTTGTGCGAGATCCCA 59.604 50.000 0.00 0.00 0.00 4.37
564 565 2.380084 TACAACTTGTGCGAGATCCC 57.620 50.000 4.57 0.00 0.00 3.85
565 566 3.521560 TCATACAACTTGTGCGAGATCC 58.478 45.455 4.57 0.00 0.00 3.36
566 567 4.424626 TCTCATACAACTTGTGCGAGATC 58.575 43.478 15.84 0.00 35.48 2.75
567 568 4.456280 TCTCATACAACTTGTGCGAGAT 57.544 40.909 15.84 0.00 35.48 2.75
568 569 3.934457 TCTCATACAACTTGTGCGAGA 57.066 42.857 15.84 15.84 36.95 4.04
569 570 4.428209 AGATCTCATACAACTTGTGCGAG 58.572 43.478 4.57 9.67 33.76 5.03
570 571 4.082245 TGAGATCTCATACAACTTGTGCGA 60.082 41.667 21.67 0.53 34.14 5.10
571 572 4.032217 GTGAGATCTCATACAACTTGTGCG 59.968 45.833 27.51 0.00 42.18 5.34
572 573 4.931601 TGTGAGATCTCATACAACTTGTGC 59.068 41.667 27.51 11.04 42.18 4.57
573 574 7.606858 AATGTGAGATCTCATACAACTTGTG 57.393 36.000 27.51 0.00 42.18 3.33
574 575 9.376075 CTAAATGTGAGATCTCATACAACTTGT 57.624 33.333 27.51 10.54 42.18 3.16
575 576 8.824781 CCTAAATGTGAGATCTCATACAACTTG 58.175 37.037 27.51 13.30 42.18 3.16
576 577 8.543774 ACCTAAATGTGAGATCTCATACAACTT 58.456 33.333 27.51 18.92 42.18 2.66
577 578 7.984050 CACCTAAATGTGAGATCTCATACAACT 59.016 37.037 27.51 14.68 42.18 3.16
578 579 7.981789 TCACCTAAATGTGAGATCTCATACAAC 59.018 37.037 27.51 14.98 40.22 3.32
579 580 8.078060 TCACCTAAATGTGAGATCTCATACAA 57.922 34.615 27.51 14.34 40.22 2.41
580 581 7.660030 TCACCTAAATGTGAGATCTCATACA 57.340 36.000 27.51 21.23 40.22 2.29
591 592 5.594317 TGATCTCGATCTCACCTAAATGTGA 59.406 40.000 8.25 0.00 42.68 3.58
592 593 5.836347 TGATCTCGATCTCACCTAAATGTG 58.164 41.667 8.25 0.00 38.60 3.21
593 594 6.276847 GTTGATCTCGATCTCACCTAAATGT 58.723 40.000 8.25 0.00 38.60 2.71
594 595 5.694006 GGTTGATCTCGATCTCACCTAAATG 59.306 44.000 15.77 0.00 38.13 2.32
595 596 5.508153 CGGTTGATCTCGATCTCACCTAAAT 60.508 44.000 18.51 0.00 38.58 1.40
596 597 4.202020 CGGTTGATCTCGATCTCACCTAAA 60.202 45.833 18.51 0.75 38.58 1.85
597 598 3.315470 CGGTTGATCTCGATCTCACCTAA 59.685 47.826 18.51 1.28 38.58 2.69
598 599 2.879026 CGGTTGATCTCGATCTCACCTA 59.121 50.000 18.51 0.00 38.58 3.08
599 600 1.678627 CGGTTGATCTCGATCTCACCT 59.321 52.381 18.51 0.00 38.58 4.00
600 601 1.269309 CCGGTTGATCTCGATCTCACC 60.269 57.143 14.17 14.17 38.60 4.02
601 602 1.676529 TCCGGTTGATCTCGATCTCAC 59.323 52.381 0.00 5.24 38.60 3.51
602 603 2.052782 TCCGGTTGATCTCGATCTCA 57.947 50.000 0.00 0.00 38.60 3.27
603 604 3.438297 TTTCCGGTTGATCTCGATCTC 57.562 47.619 0.00 2.41 38.60 2.75
604 605 3.887621 TTTTCCGGTTGATCTCGATCT 57.112 42.857 0.00 0.00 38.60 2.75
659 660 8.995220 CCTCAAATGAATGTTGTCAAATGATTT 58.005 29.630 0.00 0.00 30.46 2.17
660 661 8.152246 ACCTCAAATGAATGTTGTCAAATGATT 58.848 29.630 0.00 0.00 30.46 2.57
661 662 7.673180 ACCTCAAATGAATGTTGTCAAATGAT 58.327 30.769 0.00 0.00 30.46 2.45
662 663 7.053316 ACCTCAAATGAATGTTGTCAAATGA 57.947 32.000 0.00 0.00 0.00 2.57
663 664 8.865978 CATACCTCAAATGAATGTTGTCAAATG 58.134 33.333 0.00 0.00 0.00 2.32
664 665 8.587608 ACATACCTCAAATGAATGTTGTCAAAT 58.412 29.630 0.00 0.00 0.00 2.32
665 666 7.950512 ACATACCTCAAATGAATGTTGTCAAA 58.049 30.769 0.00 0.00 0.00 2.69
666 667 7.523293 ACATACCTCAAATGAATGTTGTCAA 57.477 32.000 0.00 0.00 0.00 3.18
667 668 7.663493 TGTACATACCTCAAATGAATGTTGTCA 59.337 33.333 4.95 1.99 33.15 3.58
668 669 7.962918 GTGTACATACCTCAAATGAATGTTGTC 59.037 37.037 0.00 0.10 33.15 3.18
669 670 7.446931 TGTGTACATACCTCAAATGAATGTTGT 59.553 33.333 0.00 5.69 33.15 3.32
670 671 7.815641 TGTGTACATACCTCAAATGAATGTTG 58.184 34.615 0.00 0.00 33.15 3.33
671 672 7.994425 TGTGTACATACCTCAAATGAATGTT 57.006 32.000 0.00 0.00 33.15 2.71
672 673 7.446931 TGTTGTGTACATACCTCAAATGAATGT 59.553 33.333 0.00 5.00 35.16 2.71
673 674 7.815641 TGTTGTGTACATACCTCAAATGAATG 58.184 34.615 0.00 0.00 0.00 2.67
674 675 7.994425 TGTTGTGTACATACCTCAAATGAAT 57.006 32.000 0.00 0.00 0.00 2.57
675 676 7.809546 TTGTTGTGTACATACCTCAAATGAA 57.190 32.000 0.00 0.00 36.44 2.57
676 677 7.809546 TTTGTTGTGTACATACCTCAAATGA 57.190 32.000 0.00 0.00 36.44 2.57
677 678 8.864069 TTTTTGTTGTGTACATACCTCAAATG 57.136 30.769 0.00 0.00 36.44 2.32
678 679 9.691362 GATTTTTGTTGTGTACATACCTCAAAT 57.309 29.630 0.00 5.64 36.44 2.32
679 680 8.687242 TGATTTTTGTTGTGTACATACCTCAAA 58.313 29.630 0.00 5.87 36.44 2.69
680 681 8.226819 TGATTTTTGTTGTGTACATACCTCAA 57.773 30.769 0.00 0.00 36.44 3.02
681 682 7.521423 GCTGATTTTTGTTGTGTACATACCTCA 60.521 37.037 0.00 0.00 36.44 3.86
682 683 6.801862 GCTGATTTTTGTTGTGTACATACCTC 59.198 38.462 0.00 0.00 36.44 3.85
683 684 6.490040 AGCTGATTTTTGTTGTGTACATACCT 59.510 34.615 0.00 0.00 36.44 3.08
684 685 6.677913 AGCTGATTTTTGTTGTGTACATACC 58.322 36.000 0.00 0.00 36.44 2.73
685 686 7.359595 TGAGCTGATTTTTGTTGTGTACATAC 58.640 34.615 0.00 1.27 36.44 2.39
686 687 7.443879 TCTGAGCTGATTTTTGTTGTGTACATA 59.556 33.333 0.00 0.00 36.44 2.29
687 688 6.262944 TCTGAGCTGATTTTTGTTGTGTACAT 59.737 34.615 0.00 0.00 36.44 2.29
688 689 5.588246 TCTGAGCTGATTTTTGTTGTGTACA 59.412 36.000 0.00 0.00 34.12 2.90
689 690 6.060028 TCTGAGCTGATTTTTGTTGTGTAC 57.940 37.500 0.00 0.00 0.00 2.90
690 691 6.318648 AGTTCTGAGCTGATTTTTGTTGTGTA 59.681 34.615 0.00 0.00 0.00 2.90
691 692 5.126061 AGTTCTGAGCTGATTTTTGTTGTGT 59.874 36.000 0.00 0.00 0.00 3.72
692 693 5.585390 AGTTCTGAGCTGATTTTTGTTGTG 58.415 37.500 0.00 0.00 0.00 3.33
693 694 5.841957 AGTTCTGAGCTGATTTTTGTTGT 57.158 34.783 0.00 0.00 0.00 3.32
694 695 6.267817 TCAAGTTCTGAGCTGATTTTTGTTG 58.732 36.000 0.00 0.00 0.00 3.33
695 696 6.455360 TCAAGTTCTGAGCTGATTTTTGTT 57.545 33.333 0.00 0.00 0.00 2.83
696 697 6.040166 ACATCAAGTTCTGAGCTGATTTTTGT 59.960 34.615 0.00 0.00 37.52 2.83
697 698 6.444633 ACATCAAGTTCTGAGCTGATTTTTG 58.555 36.000 0.00 0.00 37.52 2.44
698 699 6.645790 ACATCAAGTTCTGAGCTGATTTTT 57.354 33.333 0.00 0.00 37.52 1.94
699 700 6.712095 TGTACATCAAGTTCTGAGCTGATTTT 59.288 34.615 0.00 0.00 37.52 1.82
700 701 6.233434 TGTACATCAAGTTCTGAGCTGATTT 58.767 36.000 0.00 0.00 37.52 2.17
701 702 5.798132 TGTACATCAAGTTCTGAGCTGATT 58.202 37.500 0.00 0.00 37.52 2.57
702 703 5.411831 TGTACATCAAGTTCTGAGCTGAT 57.588 39.130 0.00 0.00 37.52 2.90
703 704 4.871933 TGTACATCAAGTTCTGAGCTGA 57.128 40.909 0.00 0.00 37.52 4.26
704 705 5.640783 TCAATGTACATCAAGTTCTGAGCTG 59.359 40.000 9.23 0.00 37.52 4.24
705 706 5.798132 TCAATGTACATCAAGTTCTGAGCT 58.202 37.500 9.23 0.00 37.52 4.09
706 707 5.871524 TCTCAATGTACATCAAGTTCTGAGC 59.128 40.000 19.73 0.00 37.52 4.26
707 708 7.318893 TCTCTCAATGTACATCAAGTTCTGAG 58.681 38.462 18.95 18.95 37.52 3.35
708 709 7.232118 TCTCTCAATGTACATCAAGTTCTGA 57.768 36.000 9.23 6.41 38.81 3.27
709 710 8.489990 AATCTCTCAATGTACATCAAGTTCTG 57.510 34.615 9.23 1.88 0.00 3.02
710 711 8.316946 TGAATCTCTCAATGTACATCAAGTTCT 58.683 33.333 9.23 0.00 0.00 3.01
711 712 8.484641 TGAATCTCTCAATGTACATCAAGTTC 57.515 34.615 9.23 9.63 0.00 3.01
712 713 8.853077 TTGAATCTCTCAATGTACATCAAGTT 57.147 30.769 9.23 0.93 39.20 2.66
713 714 8.853077 TTTGAATCTCTCAATGTACATCAAGT 57.147 30.769 9.23 0.00 43.64 3.16
739 740 9.480053 CCACTATTCACATTCAAATTTGTCTTT 57.520 29.630 17.47 0.00 0.00 2.52
740 741 7.599998 GCCACTATTCACATTCAAATTTGTCTT 59.400 33.333 17.47 1.76 0.00 3.01
741 742 7.092716 GCCACTATTCACATTCAAATTTGTCT 58.907 34.615 17.47 4.00 0.00 3.41
742 743 6.867816 TGCCACTATTCACATTCAAATTTGTC 59.132 34.615 17.47 0.00 0.00 3.18
743 744 6.757237 TGCCACTATTCACATTCAAATTTGT 58.243 32.000 17.47 0.00 0.00 2.83
744 745 7.385752 AGTTGCCACTATTCACATTCAAATTTG 59.614 33.333 12.15 12.15 0.00 2.32
745 746 7.444299 AGTTGCCACTATTCACATTCAAATTT 58.556 30.769 0.00 0.00 0.00 1.82
746 747 6.996509 AGTTGCCACTATTCACATTCAAATT 58.003 32.000 0.00 0.00 0.00 1.82
747 748 6.594788 AGTTGCCACTATTCACATTCAAAT 57.405 33.333 0.00 0.00 0.00 2.32
748 749 6.403866 AAGTTGCCACTATTCACATTCAAA 57.596 33.333 0.00 0.00 30.68 2.69
749 750 6.040278 TCAAAGTTGCCACTATTCACATTCAA 59.960 34.615 0.00 0.00 30.68 2.69
750 751 5.534278 TCAAAGTTGCCACTATTCACATTCA 59.466 36.000 0.00 0.00 30.68 2.57
751 752 6.012658 TCAAAGTTGCCACTATTCACATTC 57.987 37.500 0.00 0.00 30.68 2.67
752 753 5.536161 ACTCAAAGTTGCCACTATTCACATT 59.464 36.000 0.00 0.00 30.68 2.71
753 754 5.048504 CACTCAAAGTTGCCACTATTCACAT 60.049 40.000 0.00 0.00 30.68 3.21
754 755 4.275689 CACTCAAAGTTGCCACTATTCACA 59.724 41.667 0.00 0.00 30.68 3.58
755 756 4.320494 CCACTCAAAGTTGCCACTATTCAC 60.320 45.833 0.00 0.00 30.68 3.18
756 757 3.820467 CCACTCAAAGTTGCCACTATTCA 59.180 43.478 0.00 0.00 30.68 2.57
757 758 4.072131 TCCACTCAAAGTTGCCACTATTC 58.928 43.478 0.00 0.00 30.68 1.75
758 759 4.098914 TCCACTCAAAGTTGCCACTATT 57.901 40.909 0.00 0.00 30.68 1.73
759 760 3.788227 TCCACTCAAAGTTGCCACTAT 57.212 42.857 0.00 0.00 30.68 2.12
760 761 3.788227 ATCCACTCAAAGTTGCCACTA 57.212 42.857 0.00 0.00 30.68 2.74
761 762 2.664402 ATCCACTCAAAGTTGCCACT 57.336 45.000 0.00 0.00 33.11 4.00
762 763 5.648092 AGTATTATCCACTCAAAGTTGCCAC 59.352 40.000 0.00 0.00 0.00 5.01
763 764 5.815581 AGTATTATCCACTCAAAGTTGCCA 58.184 37.500 0.00 0.00 0.00 4.92
764 765 6.759497 AAGTATTATCCACTCAAAGTTGCC 57.241 37.500 0.00 0.00 0.00 4.52
765 766 7.750903 GTCAAAGTATTATCCACTCAAAGTTGC 59.249 37.037 0.00 0.00 0.00 4.17
766 767 8.783093 TGTCAAAGTATTATCCACTCAAAGTTG 58.217 33.333 0.00 0.00 0.00 3.16
767 768 8.784043 GTGTCAAAGTATTATCCACTCAAAGTT 58.216 33.333 0.00 0.00 0.00 2.66
768 769 8.157476 AGTGTCAAAGTATTATCCACTCAAAGT 58.843 33.333 0.00 0.00 0.00 2.66
769 770 8.553459 AGTGTCAAAGTATTATCCACTCAAAG 57.447 34.615 0.00 0.00 0.00 2.77
786 787 9.790389 ACAAAATCAAACGTTAATAGTGTCAAA 57.210 25.926 0.00 0.00 0.00 2.69
787 788 9.440784 GACAAAATCAAACGTTAATAGTGTCAA 57.559 29.630 20.66 0.00 32.68 3.18
788 789 8.832521 AGACAAAATCAAACGTTAATAGTGTCA 58.167 29.630 23.76 3.21 34.39 3.58
789 790 9.659830 AAGACAAAATCAAACGTTAATAGTGTC 57.340 29.630 19.39 19.39 0.00 3.67
936 937 8.335532 TCACATTAGGAATGAGTTCGATTTTT 57.664 30.769 6.21 0.00 41.46 1.94
937 938 7.824289 TCTCACATTAGGAATGAGTTCGATTTT 59.176 33.333 6.21 0.00 41.46 1.82
938 939 7.331026 TCTCACATTAGGAATGAGTTCGATTT 58.669 34.615 6.21 0.00 41.46 2.17
939 940 6.878317 TCTCACATTAGGAATGAGTTCGATT 58.122 36.000 6.21 0.00 41.46 3.34
940 941 6.471233 TCTCACATTAGGAATGAGTTCGAT 57.529 37.500 6.21 0.00 41.46 3.59
941 942 5.914898 TCTCACATTAGGAATGAGTTCGA 57.085 39.130 6.21 0.00 41.46 3.71
942 943 6.511416 AGATCTCACATTAGGAATGAGTTCG 58.489 40.000 6.21 0.00 41.19 3.95
943 944 7.495901 TGAGATCTCACATTAGGAATGAGTTC 58.504 38.462 21.67 2.83 42.01 3.01
944 945 7.429374 TGAGATCTCACATTAGGAATGAGTT 57.571 36.000 21.67 0.00 42.01 3.01
959 960 2.700371 ACTTGTGTGGTGTGAGATCTCA 59.300 45.455 21.67 21.67 37.24 3.27
960 961 3.006323 AGACTTGTGTGGTGTGAGATCTC 59.994 47.826 16.21 16.21 0.00 2.75
961 962 2.968574 AGACTTGTGTGGTGTGAGATCT 59.031 45.455 0.00 0.00 0.00 2.75
962 963 3.321497 GAGACTTGTGTGGTGTGAGATC 58.679 50.000 0.00 0.00 0.00 2.75
963 964 2.037772 GGAGACTTGTGTGGTGTGAGAT 59.962 50.000 0.00 0.00 0.00 2.75
964 965 1.412710 GGAGACTTGTGTGGTGTGAGA 59.587 52.381 0.00 0.00 0.00 3.27
965 966 1.541233 GGGAGACTTGTGTGGTGTGAG 60.541 57.143 0.00 0.00 0.00 3.51
966 967 0.468226 GGGAGACTTGTGTGGTGTGA 59.532 55.000 0.00 0.00 0.00 3.58
967 968 0.535102 GGGGAGACTTGTGTGGTGTG 60.535 60.000 0.00 0.00 0.00 3.82
968 969 1.705997 GGGGGAGACTTGTGTGGTGT 61.706 60.000 0.00 0.00 0.00 4.16
969 970 1.073199 GGGGGAGACTTGTGTGGTG 59.927 63.158 0.00 0.00 0.00 4.17
970 971 0.697854 AAGGGGGAGACTTGTGTGGT 60.698 55.000 0.00 0.00 0.00 4.16
971 972 0.036875 GAAGGGGGAGACTTGTGTGG 59.963 60.000 0.00 0.00 0.00 4.17
972 973 1.059913 AGAAGGGGGAGACTTGTGTG 58.940 55.000 0.00 0.00 0.00 3.82
973 974 1.821088 AAGAAGGGGGAGACTTGTGT 58.179 50.000 0.00 0.00 0.00 3.72
974 975 2.373502 AGAAAGAAGGGGGAGACTTGTG 59.626 50.000 0.00 0.00 0.00 3.33
975 976 2.707554 AGAAAGAAGGGGGAGACTTGT 58.292 47.619 0.00 0.00 0.00 3.16
976 977 4.837972 CTTAGAAAGAAGGGGGAGACTTG 58.162 47.826 0.00 0.00 0.00 3.16
977 978 3.264706 GCTTAGAAAGAAGGGGGAGACTT 59.735 47.826 0.00 0.00 0.00 3.01
978 979 2.841266 GCTTAGAAAGAAGGGGGAGACT 59.159 50.000 0.00 0.00 0.00 3.24
979 980 2.572104 TGCTTAGAAAGAAGGGGGAGAC 59.428 50.000 0.00 0.00 0.00 3.36
980 981 2.915869 TGCTTAGAAAGAAGGGGGAGA 58.084 47.619 0.00 0.00 0.00 3.71
981 982 3.549794 CATGCTTAGAAAGAAGGGGGAG 58.450 50.000 0.00 0.00 0.00 4.30
982 983 2.242196 CCATGCTTAGAAAGAAGGGGGA 59.758 50.000 0.00 0.00 34.23 4.81
983 984 2.659428 CCATGCTTAGAAAGAAGGGGG 58.341 52.381 0.00 0.00 34.23 5.40
984 985 2.027385 GCCATGCTTAGAAAGAAGGGG 58.973 52.381 0.78 0.00 38.48 4.79
985 986 2.686915 CTGCCATGCTTAGAAAGAAGGG 59.313 50.000 0.00 0.00 41.10 3.95
986 987 2.098770 GCTGCCATGCTTAGAAAGAAGG 59.901 50.000 0.00 0.00 0.00 3.46
987 988 3.015327 AGCTGCCATGCTTAGAAAGAAG 58.985 45.455 0.00 0.00 40.93 2.85
988 989 3.077484 AGCTGCCATGCTTAGAAAGAA 57.923 42.857 0.00 0.00 40.93 2.52
989 990 2.795231 AGCTGCCATGCTTAGAAAGA 57.205 45.000 0.00 0.00 40.93 2.52
1486 1487 2.670148 GGATGTTCCAGGAGCCGGT 61.670 63.158 1.90 0.00 36.28 5.28
1623 1624 4.838486 CGAGCCTCGTCCACGCTC 62.838 72.222 5.82 0.00 44.48 5.03
1643 1644 1.592743 GGCATGCCATCAAACAGCA 59.407 52.632 32.08 0.00 41.50 4.41
1725 1726 5.156608 TCATGAACAGATCAAGAGCTTCA 57.843 39.130 0.00 0.00 42.54 3.02
1738 1739 3.732212 TCTCGGGCATATTCATGAACAG 58.268 45.455 11.07 4.81 33.67 3.16
1827 1828 1.285578 GCATCTCGTCAAAGAGCTCC 58.714 55.000 10.93 0.00 38.12 4.70
1830 1831 2.586258 TAGGCATCTCGTCAAAGAGC 57.414 50.000 0.00 0.00 38.12 4.09
1908 1909 1.382522 ATACCTGCAGTGCCATTTCG 58.617 50.000 13.72 0.00 0.00 3.46
1962 1963 0.383949 CACCCAAAAACGTCACCTGG 59.616 55.000 0.00 0.00 0.00 4.45
2102 2103 5.521372 GCCAATCTAATTTCTCCACATTTGC 59.479 40.000 0.00 0.00 0.00 3.68
2112 2113 5.420104 CACCTTCCTTGCCAATCTAATTTCT 59.580 40.000 0.00 0.00 0.00 2.52
2472 2473 1.135139 AGCGCACTCCATACAGTACTG 59.865 52.381 21.44 21.44 0.00 2.74
2490 2491 2.005560 GCGTTACACCCACCTAGAAGC 61.006 57.143 0.00 0.00 0.00 3.86
2583 2584 8.812329 GCATAAATGTTAGACAAGAGAGTGTAG 58.188 37.037 0.00 0.00 0.00 2.74
2650 2651 6.743110 TCTTTAGTCCTCGATCATTCATCTG 58.257 40.000 0.00 0.00 0.00 2.90
2662 2663 1.993370 CGGCTGTTTCTTTAGTCCTCG 59.007 52.381 0.00 0.00 0.00 4.63
2682 2683 3.209410 CAGCTCAATCCAACTACATCCC 58.791 50.000 0.00 0.00 0.00 3.85
2880 2881 7.559897 TGACAAAATCCTGGAACTTTACTTTCT 59.440 33.333 0.00 0.00 0.00 2.52
2902 2903 1.887956 GCAAAATGCCTCCCTCTGACA 60.888 52.381 0.00 0.00 37.42 3.58
2913 2914 3.924144 TGATTTAGTGGTGCAAAATGCC 58.076 40.909 0.00 0.00 44.23 4.40
2930 2931 4.458989 ACAATGTACGCCAATTGTCTGATT 59.541 37.500 4.43 0.00 32.41 2.57
2934 2935 4.827692 TCTACAATGTACGCCAATTGTCT 58.172 39.130 11.37 0.00 38.15 3.41
2945 2946 8.693625 ACCATAGGTCTAAACTCTACAATGTAC 58.306 37.037 0.00 0.00 0.00 2.90
2975 2976 0.989602 ACTTAGCCTGGGGTAACACC 59.010 55.000 7.13 0.00 42.17 4.16
2998 3017 1.801242 TAATGCTCCGAAGATGGGGA 58.199 50.000 0.00 0.00 0.00 4.81
3044 3063 6.816136 TGACATTCTACAGAACTCTGAACAA 58.184 36.000 13.61 3.23 46.59 2.83
3133 3153 7.000472 AGTGAACCAGAGAAATCAGATTCAAA 59.000 34.615 0.00 0.00 0.00 2.69
3142 3162 2.087646 GGCCAGTGAACCAGAGAAATC 58.912 52.381 0.00 0.00 0.00 2.17
3179 3199 2.710096 TACCCTGGAATAGCAAGCAC 57.290 50.000 0.00 0.00 0.00 4.40
3180 3200 2.509548 ACATACCCTGGAATAGCAAGCA 59.490 45.455 0.00 0.00 0.00 3.91
3181 3201 3.214696 ACATACCCTGGAATAGCAAGC 57.785 47.619 0.00 0.00 0.00 4.01
3182 3202 5.041191 AGAACATACCCTGGAATAGCAAG 57.959 43.478 0.00 0.00 0.00 4.01
3183 3203 5.450818 AAGAACATACCCTGGAATAGCAA 57.549 39.130 0.00 0.00 0.00 3.91
3275 3308 9.770097 CTGATAAGGTACAGAACATATGACAAT 57.230 33.333 10.38 0.00 36.38 2.71
3278 3311 9.250624 GAACTGATAAGGTACAGAACATATGAC 57.749 37.037 10.38 3.20 37.54 3.06
3297 3330 7.881775 AAAAACCTCAAGTTACAGAACTGAT 57.118 32.000 8.87 0.00 45.50 2.90
3337 3370 2.684943 GGAGTCCCCCTTTTCCAAAAA 58.315 47.619 0.00 0.00 0.00 1.94
3338 3371 2.391926 GGAGTCCCCCTTTTCCAAAA 57.608 50.000 0.00 0.00 0.00 2.44
3353 3386 3.696518 TATGCAGAGGCCGGGGAGT 62.697 63.158 2.18 0.00 40.13 3.85
3354 3387 2.443394 TTATGCAGAGGCCGGGGAG 61.443 63.158 2.18 0.00 40.13 4.30
3355 3388 2.366301 TTATGCAGAGGCCGGGGA 60.366 61.111 2.18 0.00 40.13 4.81
3356 3389 2.203209 GTTATGCAGAGGCCGGGG 60.203 66.667 2.18 0.00 40.13 5.73
3357 3390 1.097547 CAAGTTATGCAGAGGCCGGG 61.098 60.000 2.18 0.00 40.13 5.73
3358 3391 0.107703 TCAAGTTATGCAGAGGCCGG 60.108 55.000 0.00 0.00 40.13 6.13
3359 3392 1.293924 CTCAAGTTATGCAGAGGCCG 58.706 55.000 0.00 0.00 40.13 6.13
3360 3393 1.673168 CCTCAAGTTATGCAGAGGCC 58.327 55.000 4.64 0.00 40.98 5.19
3363 3396 7.615582 TGAATTTACCTCAAGTTATGCAGAG 57.384 36.000 0.00 0.00 0.00 3.35
3364 3397 8.461222 CAATGAATTTACCTCAAGTTATGCAGA 58.539 33.333 0.00 0.00 0.00 4.26
3365 3398 8.246180 ACAATGAATTTACCTCAAGTTATGCAG 58.754 33.333 0.00 0.00 0.00 4.41
3366 3399 8.121305 ACAATGAATTTACCTCAAGTTATGCA 57.879 30.769 0.00 0.00 0.00 3.96
3453 3486 4.319911 GGAGTTACAAAGCATGCAAACGTA 60.320 41.667 21.98 12.30 34.83 3.57
3454 3487 3.550030 GGAGTTACAAAGCATGCAAACGT 60.550 43.478 21.98 13.33 34.83 3.99
3455 3488 2.979813 GGAGTTACAAAGCATGCAAACG 59.020 45.455 21.98 7.67 34.83 3.60
3456 3489 3.976169 TGGAGTTACAAAGCATGCAAAC 58.024 40.909 21.98 14.69 0.00 2.93
3707 3755 9.601971 CAATCCAAGACAAAAATTTATTTGCAG 57.398 29.630 3.08 0.00 42.68 4.41
3713 3761 9.492973 CTTCCACAATCCAAGACAAAAATTTAT 57.507 29.630 0.00 0.00 0.00 1.40
3767 3818 2.498167 AGTTCTTGCCTGCAACTGTAG 58.502 47.619 0.00 0.00 0.00 2.74
3798 3849 2.837532 GCAAATTGCCTTTTGGGAGA 57.162 45.000 6.72 0.00 42.25 3.71
3814 3865 0.106769 TGGCAGAGTTCACAAGGCAA 60.107 50.000 0.00 0.00 0.00 4.52
3815 3866 0.111061 ATGGCAGAGTTCACAAGGCA 59.889 50.000 0.00 0.00 39.14 4.75
3816 3867 0.524862 CATGGCAGAGTTCACAAGGC 59.475 55.000 0.00 0.00 0.00 4.35


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.