Multiple sequence alignment - TraesCS4A01G377800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G377800 chr4A 100.000 4365 0 0 1 4365 654060682 654056318 0.000000e+00 8061.0
1 TraesCS4A01G377800 chr4A 92.804 2293 152 4 954 3236 652815051 652817340 0.000000e+00 3308.0
2 TraesCS4A01G377800 chr4A 88.335 2486 263 13 1037 3522 653074415 653076873 0.000000e+00 2959.0
3 TraesCS4A01G377800 chr4A 94.297 1736 88 4 1872 3604 653410942 653412669 0.000000e+00 2647.0
4 TraesCS4A01G377800 chr4A 91.266 916 62 7 954 1855 653410051 653410962 0.000000e+00 1232.0
5 TraesCS4A01G377800 chr4A 94.872 78 2 2 3592 3668 653412812 653412888 2.130000e-23 121.0
6 TraesCS4A01G377800 chr7A 90.009 3283 195 50 408 3670 45982968 45979799 0.000000e+00 4122.0
7 TraesCS4A01G377800 chr7A 87.786 3234 288 41 408 3620 44821341 44824488 0.000000e+00 3685.0
8 TraesCS4A01G377800 chr7A 88.587 2690 244 27 943 3620 46062028 46059390 0.000000e+00 3208.0
9 TraesCS4A01G377800 chr7A 87.687 2680 264 28 954 3620 46100609 46097983 0.000000e+00 3061.0
10 TraesCS4A01G377800 chr7A 88.345 2514 257 20 1034 3530 45857672 45855178 0.000000e+00 2987.0
11 TraesCS4A01G377800 chr7A 87.061 2674 242 40 1010 3663 44448267 44445678 0.000000e+00 2926.0
12 TraesCS4A01G377800 chr7A 93.017 401 25 3 3655 4053 644704042 644704441 2.260000e-162 582.0
13 TraesCS4A01G377800 chr7A 92.947 397 21 6 3667 4060 80296681 80296289 4.900000e-159 571.0
14 TraesCS4A01G377800 chr7A 91.727 411 26 6 3656 4060 539409719 539410127 8.200000e-157 564.0
15 TraesCS4A01G377800 chr7A 91.687 409 29 5 3655 4060 643412178 643412584 2.950000e-156 562.0
16 TraesCS4A01G377800 chr7A 94.169 343 19 1 408 750 46064642 46064301 5.000000e-144 521.0
17 TraesCS4A01G377800 chr7A 97.386 306 7 1 4060 4365 556584944 556584640 1.800000e-143 520.0
18 TraesCS4A01G377800 chr7A 87.356 348 16 16 408 750 44770295 44770619 1.480000e-99 374.0
19 TraesCS4A01G377800 chr7A 93.991 233 13 1 408 639 46109116 46108884 6.950000e-93 351.0
20 TraesCS4A01G377800 chr7A 83.815 346 17 10 621 964 46108867 46108559 4.270000e-75 292.0
21 TraesCS4A01G377800 chr7A 95.882 170 7 0 220 389 44769944 44770113 4.300000e-70 276.0
22 TraesCS4A01G377800 chr7A 96.774 155 5 0 235 389 46111539 46111385 4.330000e-65 259.0
23 TraesCS4A01G377800 chr7D 88.876 2490 251 14 1034 3522 43634550 43632086 0.000000e+00 3040.0
24 TraesCS4A01G377800 chr7D 93.875 1502 89 2 1865 3366 43637645 43636147 0.000000e+00 2261.0
25 TraesCS4A01G377800 chr7D 90.872 493 45 0 1382 1874 43638414 43637922 0.000000e+00 662.0
26 TraesCS4A01G377800 chr7D 85.258 563 51 19 836 1387 43660730 43660189 6.380000e-153 551.0
27 TraesCS4A01G377800 chr7D 84.902 563 53 20 836 1387 43682089 43681548 1.380000e-149 540.0
28 TraesCS4A01G377800 chr7D 91.667 276 18 4 409 679 43666549 43666274 1.150000e-100 377.0
29 TraesCS4A01G377800 chr7D 90.942 276 20 4 409 679 43687925 43687650 2.480000e-97 366.0
30 TraesCS4A01G377800 chr7D 84.375 288 21 12 410 677 43662540 43662257 1.200000e-65 261.0
31 TraesCS4A01G377800 chr7D 84.375 288 21 12 410 677 43683894 43683611 1.200000e-65 261.0
32 TraesCS4A01G377800 chr7D 82.212 208 15 15 53 252 43688947 43688754 4.520000e-35 159.0
33 TraesCS4A01G377800 chr7D 89.167 120 8 4 137 252 43667320 43667202 1.270000e-30 145.0
34 TraesCS4A01G377800 chr4D 73.966 2055 396 89 1114 3072 25155517 25157528 0.000000e+00 702.0
35 TraesCS4A01G377800 chr4D 73.069 1411 287 68 1434 2778 5670302 5671685 8.730000e-112 414.0
36 TraesCS4A01G377800 chr4D 96.774 31 1 0 960 990 24338338 24338308 8.000000e-03 52.8
37 TraesCS4A01G377800 chr2A 92.402 408 28 3 3656 4060 697536895 697536488 2.930000e-161 579.0
38 TraesCS4A01G377800 chr5A 92.750 400 27 2 3655 4053 640027985 640028383 1.050000e-160 577.0
39 TraesCS4A01G377800 chr5A 97.078 308 9 0 4058 4365 585144382 585144075 1.800000e-143 520.0
40 TraesCS4A01G377800 chr5A 97.078 308 9 0 4058 4365 696278290 696278597 1.800000e-143 520.0
41 TraesCS4A01G377800 chr5A 96.753 308 10 0 4058 4365 114419873 114420180 8.370000e-142 514.0
42 TraesCS4A01G377800 chr3D 92.421 409 23 7 3655 4060 611012914 611013317 1.050000e-160 577.0
43 TraesCS4A01G377800 chr3A 92.695 397 27 2 3659 4053 696960190 696960586 4.900000e-159 571.0
44 TraesCS4A01G377800 chr1A 91.667 408 29 5 3657 4060 297119060 297118654 1.060000e-155 560.0
45 TraesCS4A01G377800 chr6A 97.078 308 9 0 4058 4365 589641049 589641356 1.800000e-143 520.0
46 TraesCS4A01G377800 chr6A 97.360 303 8 0 4060 4362 222927422 222927724 2.330000e-142 516.0
47 TraesCS4A01G377800 chr4B 97.078 308 9 0 4058 4365 326554279 326554586 1.800000e-143 520.0
48 TraesCS4A01G377800 chr6B 96.753 308 10 0 4058 4365 658844432 658844125 8.370000e-142 514.0
49 TraesCS4A01G377800 chr1B 96.753 308 10 0 4058 4365 687569002 687568695 8.370000e-142 514.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G377800 chr4A 654056318 654060682 4364 True 8061.000000 8061 100.000000 1 4365 1 chr4A.!!$R1 4364
1 TraesCS4A01G377800 chr4A 652815051 652817340 2289 False 3308.000000 3308 92.804000 954 3236 1 chr4A.!!$F1 2282
2 TraesCS4A01G377800 chr4A 653074415 653076873 2458 False 2959.000000 2959 88.335000 1037 3522 1 chr4A.!!$F2 2485
3 TraesCS4A01G377800 chr4A 653410051 653412888 2837 False 1333.333333 2647 93.478333 954 3668 3 chr4A.!!$F3 2714
4 TraesCS4A01G377800 chr7A 45979799 45982968 3169 True 4122.000000 4122 90.009000 408 3670 1 chr7A.!!$R3 3262
5 TraesCS4A01G377800 chr7A 44821341 44824488 3147 False 3685.000000 3685 87.786000 408 3620 1 chr7A.!!$F1 3212
6 TraesCS4A01G377800 chr7A 46097983 46100609 2626 True 3061.000000 3061 87.687000 954 3620 1 chr7A.!!$R4 2666
7 TraesCS4A01G377800 chr7A 45855178 45857672 2494 True 2987.000000 2987 88.345000 1034 3530 1 chr7A.!!$R2 2496
8 TraesCS4A01G377800 chr7A 44445678 44448267 2589 True 2926.000000 2926 87.061000 1010 3663 1 chr7A.!!$R1 2653
9 TraesCS4A01G377800 chr7A 46059390 46064642 5252 True 1864.500000 3208 91.378000 408 3620 2 chr7A.!!$R7 3212
10 TraesCS4A01G377800 chr7A 44769944 44770619 675 False 325.000000 374 91.619000 220 750 2 chr7A.!!$F5 530
11 TraesCS4A01G377800 chr7A 46108559 46111539 2980 True 300.666667 351 91.526667 235 964 3 chr7A.!!$R8 729
12 TraesCS4A01G377800 chr7D 43632086 43638414 6328 True 1987.666667 3040 91.207667 1034 3522 3 chr7D.!!$R1 2488
13 TraesCS4A01G377800 chr7D 43660189 43667320 7131 True 333.500000 551 87.616750 137 1387 4 chr7D.!!$R2 1250
14 TraesCS4A01G377800 chr7D 43681548 43688947 7399 True 331.500000 540 85.607750 53 1387 4 chr7D.!!$R3 1334
15 TraesCS4A01G377800 chr4D 25155517 25157528 2011 False 702.000000 702 73.966000 1114 3072 1 chr4D.!!$F2 1958
16 TraesCS4A01G377800 chr4D 5670302 5671685 1383 False 414.000000 414 73.069000 1434 2778 1 chr4D.!!$F1 1344

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
324 329 0.038343 GGTCGTGCGTAGGGTGTTAA 60.038 55.0 0.00 0.0 0.00 2.01 F
1251 11648 0.323633 TCGACCCCGTCTCCAACATA 60.324 55.0 0.00 0.0 37.05 2.29 F
2583 13089 0.036105 TGCGCCTCAATGACATGACT 60.036 50.0 4.18 0.0 0.00 3.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1630 12066 0.321996 AAGTCGTCCTCTTTGAGCCC 59.678 55.0 0.00 0.0 0.00 5.19 R
2596 13102 0.528924 GAGCATTTGAGCCACATGCA 59.471 50.0 20.86 0.0 46.20 3.96 R
3574 14158 0.035534 AGGCACGGACACATGCATAA 60.036 50.0 0.00 0.0 43.93 1.90 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 7.503566 TGAAGATATTCATTCTGGGAATTGGTC 59.496 37.037 0.00 0.00 36.45 4.02
38 39 4.632538 GGAATTGGTCCCGATGTTTTAG 57.367 45.455 0.00 0.00 41.10 1.85
39 40 3.380320 GGAATTGGTCCCGATGTTTTAGG 59.620 47.826 0.00 0.00 41.10 2.69
40 41 4.266714 GAATTGGTCCCGATGTTTTAGGA 58.733 43.478 0.00 0.00 0.00 2.94
41 42 3.343941 TTGGTCCCGATGTTTTAGGAG 57.656 47.619 0.00 0.00 0.00 3.69
42 43 1.557832 TGGTCCCGATGTTTTAGGAGG 59.442 52.381 0.00 0.00 0.00 4.30
43 44 1.835531 GGTCCCGATGTTTTAGGAGGA 59.164 52.381 0.00 0.00 0.00 3.71
44 45 2.237893 GGTCCCGATGTTTTAGGAGGAA 59.762 50.000 0.00 0.00 0.00 3.36
45 46 3.532542 GTCCCGATGTTTTAGGAGGAAG 58.467 50.000 0.00 0.00 0.00 3.46
46 47 2.093128 TCCCGATGTTTTAGGAGGAAGC 60.093 50.000 0.00 0.00 0.00 3.86
47 48 2.092914 CCCGATGTTTTAGGAGGAAGCT 60.093 50.000 0.00 0.00 0.00 3.74
49 50 4.202367 CCCGATGTTTTAGGAGGAAGCTAT 60.202 45.833 0.00 0.00 0.00 2.97
50 51 5.011738 CCCGATGTTTTAGGAGGAAGCTATA 59.988 44.000 0.00 0.00 0.00 1.31
51 52 6.295916 CCCGATGTTTTAGGAGGAAGCTATAT 60.296 42.308 0.00 0.00 0.00 0.86
53 54 8.478877 CCGATGTTTTAGGAGGAAGCTATATAT 58.521 37.037 0.00 0.00 0.00 0.86
89 90 5.805486 CACATATGTAAGTACACAAGACGCT 59.195 40.000 8.32 0.00 39.30 5.07
91 92 3.293311 TGTAAGTACACAAGACGCTCC 57.707 47.619 0.00 0.00 0.00 4.70
92 93 2.624364 TGTAAGTACACAAGACGCTCCA 59.376 45.455 0.00 0.00 0.00 3.86
131 132 3.577415 GGCTACGTGAAGGGGAATACTAT 59.423 47.826 0.00 0.00 0.00 2.12
135 136 6.349197 GCTACGTGAAGGGGAATACTATACTC 60.349 46.154 0.00 0.00 0.00 2.59
155 156 2.098680 GCGTCCGACGAGAGACTG 59.901 66.667 24.78 0.00 46.05 3.51
324 329 0.038343 GGTCGTGCGTAGGGTGTTAA 60.038 55.000 0.00 0.00 0.00 2.01
384 389 4.722535 AGCAGAAGGGAGGCGGGA 62.723 66.667 0.00 0.00 0.00 5.14
465 2959 1.338136 ATTAGTGAGGTGGAGCGGGG 61.338 60.000 0.00 0.00 0.00 5.73
618 3128 4.124351 CTCGCCGGCGTGGTAAGA 62.124 66.667 44.16 25.06 41.21 2.10
639 3324 6.471233 AGATAAGTGAAGGTGATCGATTCA 57.529 37.500 0.00 0.00 0.00 2.57
705 7086 6.158175 AGTCGTCGATGAGAAAAATGAAAG 57.842 37.500 7.79 0.00 0.00 2.62
826 7245 4.487714 ACGGAAGGAATCAATCAGCTAA 57.512 40.909 0.00 0.00 0.00 3.09
827 7246 4.446371 ACGGAAGGAATCAATCAGCTAAG 58.554 43.478 0.00 0.00 0.00 2.18
828 7247 3.812053 CGGAAGGAATCAATCAGCTAAGG 59.188 47.826 0.00 0.00 0.00 2.69
829 7248 4.443457 CGGAAGGAATCAATCAGCTAAGGA 60.443 45.833 0.00 0.00 0.00 3.36
830 7249 5.629125 GGAAGGAATCAATCAGCTAAGGAT 58.371 41.667 0.00 0.00 0.00 3.24
831 7250 6.519043 CGGAAGGAATCAATCAGCTAAGGATA 60.519 42.308 0.00 0.00 0.00 2.59
871 9072 4.675976 TGGTAACCGAATCGAATATGGT 57.324 40.909 3.36 0.00 33.45 3.55
883 9084 3.686241 TCGAATATGGTACGGATCGGTAG 59.314 47.826 12.96 0.52 0.00 3.18
912 9113 4.288366 TGGATGGATCGAGCCCATATTAAA 59.712 41.667 18.75 0.00 43.96 1.52
913 9114 4.878397 GGATGGATCGAGCCCATATTAAAG 59.122 45.833 18.75 0.00 43.96 1.85
914 9115 4.974645 TGGATCGAGCCCATATTAAAGT 57.025 40.909 18.75 0.00 0.00 2.66
915 9116 6.351881 GGATGGATCGAGCCCATATTAAAGTA 60.352 42.308 18.75 0.00 43.96 2.24
916 9117 6.428083 TGGATCGAGCCCATATTAAAGTAA 57.572 37.500 18.75 0.00 0.00 2.24
1251 11648 0.323633 TCGACCCCGTCTCCAACATA 60.324 55.000 0.00 0.00 37.05 2.29
1332 11735 1.207593 CGCCGCAAAGAAGTCCAAG 59.792 57.895 0.00 0.00 0.00 3.61
1630 12066 1.293924 GACCAAGCTCATGTCATCCG 58.706 55.000 5.60 0.00 0.00 4.18
1732 12174 2.738846 GGAGCAATCGATCGCATATTGT 59.261 45.455 21.84 12.92 33.96 2.71
1776 12218 4.165950 TGTCTTGCCACCATAATCCATACT 59.834 41.667 0.00 0.00 0.00 2.12
1786 12228 7.421382 CCACCATAATCCATACTAGAAAAGGGT 60.421 40.741 0.00 0.00 0.00 4.34
1802 12244 0.830648 GGGTCGATTCTCCATGTCCA 59.169 55.000 0.00 0.00 0.00 4.02
1811 12253 5.684704 GATTCTCCATGTCCATAAGAACCA 58.315 41.667 6.48 0.00 29.93 3.67
1820 12262 1.808390 ATAAGAACCACGACGCCGC 60.808 57.895 0.00 0.00 39.95 6.53
1863 12338 4.780021 ACTATGGAGGACAACAAGATCACT 59.220 41.667 0.00 0.00 0.00 3.41
1869 12344 3.392616 AGGACAACAAGATCACTTCCACT 59.607 43.478 0.00 0.00 33.70 4.00
1890 12366 1.901085 CCTCTCCTGGGACGGAAAG 59.099 63.158 0.00 0.00 36.31 2.62
2019 12507 0.107654 GCGATTACCTGCAGACCCTT 60.108 55.000 17.39 0.00 0.00 3.95
2064 12552 1.884579 CACAACTTCTGCATCAAGGCT 59.115 47.619 9.68 0.00 34.04 4.58
2095 12583 4.082523 CCACACCATCCGGCTCGT 62.083 66.667 0.00 0.00 34.57 4.18
2201 12689 3.007920 CCACAGCTGCCCTCTCCT 61.008 66.667 15.27 0.00 0.00 3.69
2250 12738 5.456921 AATACAATGACATCCTTGACCCT 57.543 39.130 4.19 0.00 0.00 4.34
2312 12800 2.125512 GGAGCTCGCCACATTCGT 60.126 61.111 7.83 0.00 0.00 3.85
2360 12863 1.588597 CTCTGGAGTTGCTCTGCGA 59.411 57.895 0.00 0.00 37.31 5.10
2373 12876 3.181472 TGCTCTGCGATACAAGATGTGAT 60.181 43.478 0.00 0.00 0.00 3.06
2572 13078 1.663388 CGTACTGTGTTGCGCCTCA 60.663 57.895 4.18 0.23 0.00 3.86
2583 13089 0.036105 TGCGCCTCAATGACATGACT 60.036 50.000 4.18 0.00 0.00 3.41
2596 13102 4.017126 TGACATGACTCTTCGTATGAGGT 58.983 43.478 0.00 0.00 35.98 3.85
2645 13160 1.968017 CTGGTGGCATTGTGCGAGT 60.968 57.895 0.00 0.00 46.21 4.18
2727 13251 1.446272 GAGGAGCTGGTTCCGTTCG 60.446 63.158 0.00 0.00 42.29 3.95
2837 13387 5.514500 TTACCTTCATTTGGCCTACTCTT 57.486 39.130 3.32 0.00 0.00 2.85
2847 13397 3.159472 TGGCCTACTCTTTTACTCGACA 58.841 45.455 3.32 0.00 0.00 4.35
2954 13507 0.175760 AGATGTGCTACCGCGTGAAT 59.824 50.000 4.92 0.00 39.65 2.57
3088 13644 1.585895 AAGGCCCCTCTAGTTTCTCC 58.414 55.000 0.00 0.00 0.00 3.71
3098 13654 1.000955 CTAGTTTCTCCGTGGCACAGT 59.999 52.381 19.09 2.15 41.80 3.55
3113 13669 3.366374 GGCACAGTTGATTGGCTTCTTAC 60.366 47.826 0.00 0.00 35.47 2.34
3200 13756 1.742411 GCTACTATGGCGAGCAAACCA 60.742 52.381 0.00 0.00 41.06 3.67
3212 13768 3.187637 CGAGCAAACCACGAGGAAAATTA 59.812 43.478 5.68 0.00 38.69 1.40
3226 13782 7.875041 ACGAGGAAAATTATGTATCCTGATGAG 59.125 37.037 0.00 0.00 42.28 2.90
3250 13806 3.370978 CCAAATACATCCCGCACGATATC 59.629 47.826 0.00 0.00 0.00 1.63
3251 13807 3.953712 AATACATCCCGCACGATATCA 57.046 42.857 3.12 0.00 0.00 2.15
3252 13808 2.717580 TACATCCCGCACGATATCAC 57.282 50.000 3.12 0.00 0.00 3.06
3253 13809 0.033504 ACATCCCGCACGATATCACC 59.966 55.000 3.12 0.00 0.00 4.02
3254 13810 0.670546 CATCCCGCACGATATCACCC 60.671 60.000 3.12 0.00 0.00 4.61
3255 13811 1.118965 ATCCCGCACGATATCACCCA 61.119 55.000 3.12 0.00 0.00 4.51
3256 13812 1.118965 TCCCGCACGATATCACCCAT 61.119 55.000 3.12 0.00 0.00 4.00
3257 13813 0.250295 CCCGCACGATATCACCCATT 60.250 55.000 3.12 0.00 0.00 3.16
3258 13814 1.001520 CCCGCACGATATCACCCATTA 59.998 52.381 3.12 0.00 0.00 1.90
3259 13815 2.066262 CCGCACGATATCACCCATTAC 58.934 52.381 3.12 0.00 0.00 1.89
3260 13816 1.719246 CGCACGATATCACCCATTACG 59.281 52.381 3.12 0.00 0.00 3.18
3261 13817 2.066262 GCACGATATCACCCATTACGG 58.934 52.381 3.12 0.00 0.00 4.02
3262 13818 2.288579 GCACGATATCACCCATTACGGA 60.289 50.000 3.12 0.00 36.56 4.69
3263 13819 3.800949 GCACGATATCACCCATTACGGAA 60.801 47.826 3.12 0.00 36.56 4.30
3264 13820 3.739300 CACGATATCACCCATTACGGAAC 59.261 47.826 3.12 0.00 36.56 3.62
3265 13821 3.243975 ACGATATCACCCATTACGGAACC 60.244 47.826 3.12 0.00 36.56 3.62
3396 13968 2.297315 TGAGTGAATCTTCTGTCGCAGT 59.703 45.455 6.72 0.00 32.61 4.40
3428 14000 3.195396 TGTGTGTGATGCTATCAGCTGTA 59.805 43.478 14.67 4.80 42.97 2.74
3480 14060 4.005650 CTGCTGTGTGTAATGATGTCCTT 58.994 43.478 0.00 0.00 0.00 3.36
3530 14113 6.438741 TCATCTAGACTGGATGACACTTTTCT 59.561 38.462 23.38 0.00 42.86 2.52
3572 14156 5.047235 CCTTGACCAAGCTACTAGTACTGTT 60.047 44.000 5.39 0.00 37.11 3.16
3573 14157 5.386958 TGACCAAGCTACTAGTACTGTTG 57.613 43.478 5.39 4.33 0.00 3.33
3574 14158 4.831155 TGACCAAGCTACTAGTACTGTTGT 59.169 41.667 5.39 4.54 0.00 3.32
3737 14476 3.497103 TGCTATTCATCATCCAGGGTG 57.503 47.619 0.00 0.00 0.00 4.61
3738 14477 2.157738 GCTATTCATCATCCAGGGTGC 58.842 52.381 0.00 0.00 0.00 5.01
3739 14478 2.487805 GCTATTCATCATCCAGGGTGCA 60.488 50.000 0.00 0.00 0.00 4.57
3740 14479 2.359981 ATTCATCATCCAGGGTGCAG 57.640 50.000 0.00 0.00 0.00 4.41
3741 14480 1.288188 TTCATCATCCAGGGTGCAGA 58.712 50.000 0.00 0.00 0.00 4.26
3742 14481 1.288188 TCATCATCCAGGGTGCAGAA 58.712 50.000 0.00 0.00 0.00 3.02
3743 14482 1.848388 TCATCATCCAGGGTGCAGAAT 59.152 47.619 0.00 0.00 0.00 2.40
3744 14483 3.047857 TCATCATCCAGGGTGCAGAATA 58.952 45.455 0.00 0.00 0.00 1.75
3745 14484 3.459227 TCATCATCCAGGGTGCAGAATAA 59.541 43.478 0.00 0.00 0.00 1.40
3746 14485 3.281727 TCATCCAGGGTGCAGAATAAC 57.718 47.619 0.00 0.00 0.00 1.89
3747 14486 2.846206 TCATCCAGGGTGCAGAATAACT 59.154 45.455 0.00 0.00 0.00 2.24
3748 14487 3.266772 TCATCCAGGGTGCAGAATAACTT 59.733 43.478 0.00 0.00 0.00 2.66
3749 14488 4.473196 TCATCCAGGGTGCAGAATAACTTA 59.527 41.667 0.00 0.00 0.00 2.24
3750 14489 5.132648 TCATCCAGGGTGCAGAATAACTTAT 59.867 40.000 0.00 0.00 0.00 1.73
3751 14490 5.450818 TCCAGGGTGCAGAATAACTTATT 57.549 39.130 0.00 0.00 0.00 1.40
3752 14491 5.437060 TCCAGGGTGCAGAATAACTTATTC 58.563 41.667 12.07 12.07 43.77 1.75
3763 14502 6.846325 GAATAACTTATTCTTCACCCGAGG 57.154 41.667 12.55 0.00 41.00 4.63
3764 14503 5.952347 ATAACTTATTCTTCACCCGAGGT 57.048 39.130 0.00 0.00 35.62 3.85
3765 14504 7.427989 AATAACTTATTCTTCACCCGAGGTA 57.572 36.000 0.00 0.00 32.11 3.08
3766 14505 5.750352 AACTTATTCTTCACCCGAGGTAA 57.250 39.130 0.00 0.00 32.11 2.85
3767 14506 5.952347 ACTTATTCTTCACCCGAGGTAAT 57.048 39.130 0.00 0.00 32.11 1.89
3768 14507 5.915175 ACTTATTCTTCACCCGAGGTAATC 58.085 41.667 0.00 0.00 32.11 1.75
3769 14508 5.661759 ACTTATTCTTCACCCGAGGTAATCT 59.338 40.000 0.00 0.00 32.11 2.40
3770 14509 6.156429 ACTTATTCTTCACCCGAGGTAATCTT 59.844 38.462 0.00 0.00 32.11 2.40
3771 14510 7.343833 ACTTATTCTTCACCCGAGGTAATCTTA 59.656 37.037 0.00 0.00 32.11 2.10
3772 14511 4.996788 TCTTCACCCGAGGTAATCTTAC 57.003 45.455 0.00 0.00 32.11 2.34
3773 14512 3.379372 TCTTCACCCGAGGTAATCTTACG 59.621 47.826 0.00 0.00 32.11 3.18
3774 14513 3.003394 TCACCCGAGGTAATCTTACGA 57.997 47.619 0.00 0.00 32.11 3.43
3775 14514 3.559069 TCACCCGAGGTAATCTTACGAT 58.441 45.455 0.00 0.00 32.11 3.73
3776 14515 3.567164 TCACCCGAGGTAATCTTACGATC 59.433 47.826 0.00 0.00 32.11 3.69
3777 14516 3.317149 CACCCGAGGTAATCTTACGATCA 59.683 47.826 0.00 0.00 32.11 2.92
3778 14517 4.022242 CACCCGAGGTAATCTTACGATCAT 60.022 45.833 0.00 0.00 32.11 2.45
3779 14518 4.587684 ACCCGAGGTAATCTTACGATCATT 59.412 41.667 0.00 0.00 32.11 2.57
3780 14519 5.070047 ACCCGAGGTAATCTTACGATCATTT 59.930 40.000 0.00 0.00 32.11 2.32
3781 14520 5.634020 CCCGAGGTAATCTTACGATCATTTC 59.366 44.000 0.00 0.00 34.50 2.17
3782 14521 6.213677 CCGAGGTAATCTTACGATCATTTCA 58.786 40.000 0.00 0.00 34.50 2.69
3783 14522 6.868864 CCGAGGTAATCTTACGATCATTTCAT 59.131 38.462 0.00 0.00 34.50 2.57
3784 14523 8.027189 CCGAGGTAATCTTACGATCATTTCATA 58.973 37.037 0.00 0.00 34.50 2.15
3785 14524 9.406828 CGAGGTAATCTTACGATCATTTCATAA 57.593 33.333 0.00 0.00 34.50 1.90
3835 14574 8.873215 AGTTACATTCCTATTCATTCACTACG 57.127 34.615 0.00 0.00 0.00 3.51
3836 14575 8.475639 AGTTACATTCCTATTCATTCACTACGT 58.524 33.333 0.00 0.00 0.00 3.57
3837 14576 9.740239 GTTACATTCCTATTCATTCACTACGTA 57.260 33.333 0.00 0.00 0.00 3.57
3888 14627 5.351458 AGGTCACAAGACAAGAAAATTTGC 58.649 37.500 0.00 0.00 46.80 3.68
3889 14628 4.207019 GGTCACAAGACAAGAAAATTTGCG 59.793 41.667 0.00 0.00 46.80 4.85
3890 14629 4.207019 GTCACAAGACAAGAAAATTTGCGG 59.793 41.667 0.00 0.00 44.34 5.69
3891 14630 4.111916 CACAAGACAAGAAAATTTGCGGT 58.888 39.130 0.00 0.00 0.00 5.68
3892 14631 4.566360 CACAAGACAAGAAAATTTGCGGTT 59.434 37.500 0.00 0.00 0.00 4.44
3893 14632 5.063312 CACAAGACAAGAAAATTTGCGGTTT 59.937 36.000 0.00 0.00 0.00 3.27
3894 14633 6.254589 CACAAGACAAGAAAATTTGCGGTTTA 59.745 34.615 0.00 0.00 0.00 2.01
3895 14634 6.983890 ACAAGACAAGAAAATTTGCGGTTTAT 59.016 30.769 0.00 0.00 0.00 1.40
3896 14635 7.042791 ACAAGACAAGAAAATTTGCGGTTTATG 60.043 33.333 0.00 0.00 0.00 1.90
3897 14636 6.512297 AGACAAGAAAATTTGCGGTTTATGT 58.488 32.000 0.00 0.00 0.00 2.29
3898 14637 6.420604 AGACAAGAAAATTTGCGGTTTATGTG 59.579 34.615 0.00 0.00 0.00 3.21
3899 14638 6.045955 ACAAGAAAATTTGCGGTTTATGTGT 58.954 32.000 0.00 0.00 0.00 3.72
3900 14639 7.203910 ACAAGAAAATTTGCGGTTTATGTGTA 58.796 30.769 0.00 0.00 0.00 2.90
3901 14640 7.870445 ACAAGAAAATTTGCGGTTTATGTGTAT 59.130 29.630 0.00 0.00 0.00 2.29
3902 14641 8.707839 CAAGAAAATTTGCGGTTTATGTGTATT 58.292 29.630 0.00 0.00 0.00 1.89
3903 14642 8.825667 AGAAAATTTGCGGTTTATGTGTATTT 57.174 26.923 0.00 0.00 0.00 1.40
3904 14643 9.267084 AGAAAATTTGCGGTTTATGTGTATTTT 57.733 25.926 0.00 0.00 0.00 1.82
3907 14646 9.477484 AAATTTGCGGTTTATGTGTATTTTACA 57.523 25.926 0.00 0.00 36.08 2.41
3977 14716 7.385668 ACGACGATTGTATATTTTCTTACGG 57.614 36.000 0.00 0.00 0.00 4.02
3978 14717 6.974622 ACGACGATTGTATATTTTCTTACGGT 59.025 34.615 0.00 0.00 0.00 4.83
3979 14718 7.166473 ACGACGATTGTATATTTTCTTACGGTC 59.834 37.037 0.00 0.00 0.00 4.79
3980 14719 7.377928 CGACGATTGTATATTTTCTTACGGTCT 59.622 37.037 0.00 0.00 0.00 3.85
3981 14720 8.571461 ACGATTGTATATTTTCTTACGGTCTC 57.429 34.615 0.00 0.00 0.00 3.36
3982 14721 8.411683 ACGATTGTATATTTTCTTACGGTCTCT 58.588 33.333 0.00 0.00 0.00 3.10
3983 14722 9.245962 CGATTGTATATTTTCTTACGGTCTCTT 57.754 33.333 0.00 0.00 0.00 2.85
3992 14731 6.939551 TTCTTACGGTCTCTTTTTATGTCG 57.060 37.500 0.00 0.00 0.00 4.35
3993 14732 6.258230 TCTTACGGTCTCTTTTTATGTCGA 57.742 37.500 0.00 0.00 0.00 4.20
3994 14733 6.680810 TCTTACGGTCTCTTTTTATGTCGAA 58.319 36.000 0.00 0.00 0.00 3.71
3995 14734 7.147312 TCTTACGGTCTCTTTTTATGTCGAAA 58.853 34.615 0.00 0.00 0.00 3.46
3996 14735 7.652909 TCTTACGGTCTCTTTTTATGTCGAAAA 59.347 33.333 0.00 0.00 0.00 2.29
3997 14736 6.796705 ACGGTCTCTTTTTATGTCGAAAAT 57.203 33.333 0.00 0.00 0.00 1.82
3998 14737 7.894376 ACGGTCTCTTTTTATGTCGAAAATA 57.106 32.000 0.00 0.00 0.00 1.40
3999 14738 8.314143 ACGGTCTCTTTTTATGTCGAAAATAA 57.686 30.769 0.00 0.00 0.00 1.40
4000 14739 8.440833 ACGGTCTCTTTTTATGTCGAAAATAAG 58.559 33.333 0.00 0.00 0.00 1.73
4001 14740 7.425595 CGGTCTCTTTTTATGTCGAAAATAAGC 59.574 37.037 0.00 0.00 0.00 3.09
4002 14741 8.234546 GGTCTCTTTTTATGTCGAAAATAAGCA 58.765 33.333 0.00 0.00 0.00 3.91
4003 14742 9.607285 GTCTCTTTTTATGTCGAAAATAAGCAA 57.393 29.630 0.00 0.00 0.00 3.91
4011 14750 7.775729 ATGTCGAAAATAAGCAAAACTTACG 57.224 32.000 0.00 0.00 43.60 3.18
4012 14751 6.946165 TGTCGAAAATAAGCAAAACTTACGA 58.054 32.000 0.00 0.00 43.60 3.43
4013 14752 7.408123 TGTCGAAAATAAGCAAAACTTACGAA 58.592 30.769 0.00 0.00 43.60 3.85
4014 14753 7.909121 TGTCGAAAATAAGCAAAACTTACGAAA 59.091 29.630 0.00 0.00 43.60 3.46
4015 14754 8.196884 GTCGAAAATAAGCAAAACTTACGAAAC 58.803 33.333 0.00 0.00 43.60 2.78
4016 14755 7.110490 TCGAAAATAAGCAAAACTTACGAAACG 59.890 33.333 0.00 0.00 43.60 3.60
4017 14756 7.097329 CGAAAATAAGCAAAACTTACGAAACGT 60.097 33.333 1.91 1.91 43.60 3.99
4018 14757 9.157259 GAAAATAAGCAAAACTTACGAAACGTA 57.843 29.630 0.00 0.00 43.60 3.57
4049 14788 8.833231 ACGATGTATTGATGGTAAAATAGAGG 57.167 34.615 0.00 0.00 0.00 3.69
4050 14789 7.878127 ACGATGTATTGATGGTAAAATAGAGGG 59.122 37.037 0.00 0.00 0.00 4.30
4051 14790 7.334421 CGATGTATTGATGGTAAAATAGAGGGG 59.666 40.741 0.00 0.00 0.00 4.79
4052 14791 6.848069 TGTATTGATGGTAAAATAGAGGGGG 58.152 40.000 0.00 0.00 0.00 5.40
4053 14792 6.391649 TGTATTGATGGTAAAATAGAGGGGGT 59.608 38.462 0.00 0.00 0.00 4.95
4054 14793 7.573238 TGTATTGATGGTAAAATAGAGGGGGTA 59.427 37.037 0.00 0.00 0.00 3.69
4055 14794 6.911993 TTGATGGTAAAATAGAGGGGGTAA 57.088 37.500 0.00 0.00 0.00 2.85
4056 14795 6.911993 TGATGGTAAAATAGAGGGGGTAAA 57.088 37.500 0.00 0.00 0.00 2.01
4057 14796 7.286667 TGATGGTAAAATAGAGGGGGTAAAA 57.713 36.000 0.00 0.00 0.00 1.52
4058 14797 7.889178 TGATGGTAAAATAGAGGGGGTAAAAT 58.111 34.615 0.00 0.00 0.00 1.82
4059 14798 9.016243 TGATGGTAAAATAGAGGGGGTAAAATA 57.984 33.333 0.00 0.00 0.00 1.40
4060 14799 9.516546 GATGGTAAAATAGAGGGGGTAAAATAG 57.483 37.037 0.00 0.00 0.00 1.73
4061 14800 8.641498 TGGTAAAATAGAGGGGGTAAAATAGA 57.359 34.615 0.00 0.00 0.00 1.98
4062 14801 8.496916 TGGTAAAATAGAGGGGGTAAAATAGAC 58.503 37.037 0.00 0.00 0.00 2.59
4063 14802 7.658982 GGTAAAATAGAGGGGGTAAAATAGACG 59.341 40.741 0.00 0.00 0.00 4.18
4064 14803 5.820404 AATAGAGGGGGTAAAATAGACGG 57.180 43.478 0.00 0.00 0.00 4.79
4065 14804 3.126323 AGAGGGGGTAAAATAGACGGT 57.874 47.619 0.00 0.00 0.00 4.83
4066 14805 3.036819 AGAGGGGGTAAAATAGACGGTC 58.963 50.000 0.00 0.00 0.00 4.79
4067 14806 3.036819 GAGGGGGTAAAATAGACGGTCT 58.963 50.000 15.95 15.95 0.00 3.85
4068 14807 4.078980 AGAGGGGGTAAAATAGACGGTCTA 60.079 45.833 19.38 19.38 32.87 2.59
4069 14808 4.824276 AGGGGGTAAAATAGACGGTCTAT 58.176 43.478 21.95 21.95 41.19 1.98
4071 14810 5.306419 AGGGGGTAAAATAGACGGTCTATTC 59.694 44.000 32.45 23.30 45.95 1.75
4072 14811 5.306419 GGGGGTAAAATAGACGGTCTATTCT 59.694 44.000 32.45 25.47 45.95 2.40
4073 14812 6.221659 GGGGTAAAATAGACGGTCTATTCTG 58.778 44.000 32.45 0.00 45.95 3.02
4074 14813 5.695363 GGGTAAAATAGACGGTCTATTCTGC 59.305 44.000 32.45 25.40 45.95 4.26
4075 14814 6.462628 GGGTAAAATAGACGGTCTATTCTGCT 60.463 42.308 32.45 22.30 45.95 4.24
4076 14815 7.255730 GGGTAAAATAGACGGTCTATTCTGCTA 60.256 40.741 32.45 21.57 45.95 3.49
4077 14816 8.139989 GGTAAAATAGACGGTCTATTCTGCTAA 58.860 37.037 32.45 17.34 45.95 3.09
4078 14817 9.694137 GTAAAATAGACGGTCTATTCTGCTAAT 57.306 33.333 32.45 18.63 45.95 1.73
4111 14850 8.398491 GAATAACTATTCTGCACACCATTTTG 57.602 34.615 2.76 0.00 39.13 2.44
4112 14851 4.789012 ACTATTCTGCACACCATTTTGG 57.211 40.909 0.00 0.00 45.02 3.28
4113 14852 2.460757 ATTCTGCACACCATTTTGGC 57.539 45.000 0.00 0.00 42.67 4.52
4114 14853 1.117994 TTCTGCACACCATTTTGGCA 58.882 45.000 0.00 0.00 42.67 4.92
4115 14854 0.388659 TCTGCACACCATTTTGGCAC 59.611 50.000 0.00 0.00 42.67 5.01
4116 14855 0.390124 CTGCACACCATTTTGGCACT 59.610 50.000 0.00 0.00 42.67 4.40
4117 14856 0.104487 TGCACACCATTTTGGCACTG 59.896 50.000 0.00 0.00 42.67 3.66
4118 14857 1.223417 GCACACCATTTTGGCACTGC 61.223 55.000 0.00 0.00 42.67 4.40
4119 14858 0.104487 CACACCATTTTGGCACTGCA 59.896 50.000 2.82 0.00 42.67 4.41
4120 14859 0.104671 ACACCATTTTGGCACTGCAC 59.895 50.000 2.82 0.00 42.67 4.57
4121 14860 0.940519 CACCATTTTGGCACTGCACG 60.941 55.000 2.82 0.00 42.67 5.34
4122 14861 2.023223 CCATTTTGGCACTGCACGC 61.023 57.895 2.82 0.00 0.00 5.34
4123 14862 1.007038 CATTTTGGCACTGCACGCT 60.007 52.632 2.82 0.00 0.00 5.07
4124 14863 1.005294 CATTTTGGCACTGCACGCTC 61.005 55.000 2.82 0.00 0.00 5.03
4125 14864 1.454572 ATTTTGGCACTGCACGCTCA 61.455 50.000 2.82 0.00 0.00 4.26
4126 14865 1.661498 TTTTGGCACTGCACGCTCAA 61.661 50.000 2.82 3.96 0.00 3.02
4127 14866 2.335052 TTTGGCACTGCACGCTCAAC 62.335 55.000 2.82 0.00 0.00 3.18
4128 14867 3.279116 GGCACTGCACGCTCAACA 61.279 61.111 2.82 0.00 0.00 3.33
4129 14868 2.250485 GCACTGCACGCTCAACAG 59.750 61.111 0.00 0.00 37.45 3.16
4130 14869 2.246739 GCACTGCACGCTCAACAGA 61.247 57.895 0.00 0.00 35.38 3.41
4131 14870 1.775039 GCACTGCACGCTCAACAGAA 61.775 55.000 0.00 0.00 35.38 3.02
4132 14871 0.234106 CACTGCACGCTCAACAGAAG 59.766 55.000 0.00 0.00 35.38 2.85
4133 14872 1.206072 CTGCACGCTCAACAGAAGC 59.794 57.895 0.00 0.00 36.38 3.86
4138 14877 3.647824 GCTCAACAGAAGCGCACT 58.352 55.556 11.47 5.61 0.00 4.40
4139 14878 1.206072 GCTCAACAGAAGCGCACTG 59.794 57.895 25.29 25.29 40.68 3.66
4140 14879 1.206072 CTCAACAGAAGCGCACTGC 59.794 57.895 26.31 7.47 46.98 4.40
4150 14889 3.404978 GCGCACTGCATCATTTTGA 57.595 47.368 0.30 0.00 45.45 2.69
4151 14890 0.986992 GCGCACTGCATCATTTTGAC 59.013 50.000 0.30 0.00 45.45 3.18
4152 14891 1.253116 CGCACTGCATCATTTTGACG 58.747 50.000 1.11 0.00 0.00 4.35
4153 14892 1.136000 CGCACTGCATCATTTTGACGA 60.136 47.619 1.11 0.00 0.00 4.20
4154 14893 2.245096 GCACTGCATCATTTTGACGAC 58.755 47.619 0.00 0.00 0.00 4.34
4155 14894 2.498905 CACTGCATCATTTTGACGACG 58.501 47.619 0.00 0.00 0.00 5.12
4156 14895 2.157474 CACTGCATCATTTTGACGACGA 59.843 45.455 0.00 0.00 0.00 4.20
4157 14896 2.413112 ACTGCATCATTTTGACGACGAG 59.587 45.455 0.00 0.00 0.00 4.18
4158 14897 1.128507 TGCATCATTTTGACGACGAGC 59.871 47.619 0.00 0.00 0.00 5.03
4159 14898 1.128507 GCATCATTTTGACGACGAGCA 59.871 47.619 0.00 0.00 0.00 4.26
4160 14899 2.762472 CATCATTTTGACGACGAGCAC 58.238 47.619 0.00 0.00 0.00 4.40
4161 14900 2.148916 TCATTTTGACGACGAGCACT 57.851 45.000 0.00 0.00 0.00 4.40
4162 14901 1.792367 TCATTTTGACGACGAGCACTG 59.208 47.619 0.00 0.00 0.00 3.66
4163 14902 0.512952 ATTTTGACGACGAGCACTGC 59.487 50.000 0.00 0.00 0.00 4.40
4164 14903 0.808060 TTTTGACGACGAGCACTGCA 60.808 50.000 0.00 0.00 0.00 4.41
4165 14904 0.808060 TTTGACGACGAGCACTGCAA 60.808 50.000 0.00 0.00 0.00 4.08
4166 14905 0.599991 TTGACGACGAGCACTGCAAT 60.600 50.000 0.00 0.00 0.00 3.56
4167 14906 0.242555 TGACGACGAGCACTGCAATA 59.757 50.000 0.00 0.00 0.00 1.90
4168 14907 0.917259 GACGACGAGCACTGCAATAG 59.083 55.000 0.00 0.00 0.00 1.73
4169 14908 0.526211 ACGACGAGCACTGCAATAGA 59.474 50.000 0.00 0.00 0.00 1.98
4170 14909 1.195347 CGACGAGCACTGCAATAGAG 58.805 55.000 3.30 0.00 0.00 2.43
4171 14910 1.202188 CGACGAGCACTGCAATAGAGA 60.202 52.381 3.30 0.00 0.00 3.10
4172 14911 2.189342 GACGAGCACTGCAATAGAGAC 58.811 52.381 3.30 0.00 0.00 3.36
4173 14912 1.821753 ACGAGCACTGCAATAGAGACT 59.178 47.619 3.30 0.00 0.00 3.24
4174 14913 3.017442 ACGAGCACTGCAATAGAGACTA 58.983 45.455 3.30 0.00 0.00 2.59
4175 14914 3.066064 ACGAGCACTGCAATAGAGACTAG 59.934 47.826 3.30 0.00 0.00 2.57
4176 14915 3.066064 CGAGCACTGCAATAGAGACTAGT 59.934 47.826 3.30 0.00 0.00 2.57
4177 14916 4.273724 CGAGCACTGCAATAGAGACTAGTA 59.726 45.833 3.30 0.00 0.00 1.82
4178 14917 5.220873 CGAGCACTGCAATAGAGACTAGTAA 60.221 44.000 3.30 0.00 0.00 2.24
4179 14918 6.531503 AGCACTGCAATAGAGACTAGTAAA 57.468 37.500 3.30 0.00 0.00 2.01
4180 14919 6.334202 AGCACTGCAATAGAGACTAGTAAAC 58.666 40.000 3.30 0.00 0.00 2.01
4181 14920 6.153680 AGCACTGCAATAGAGACTAGTAAACT 59.846 38.462 3.30 0.00 0.00 2.66
4182 14921 6.814146 GCACTGCAATAGAGACTAGTAAACTT 59.186 38.462 0.00 0.00 0.00 2.66
4183 14922 7.009723 GCACTGCAATAGAGACTAGTAAACTTC 59.990 40.741 0.00 0.00 0.00 3.01
4184 14923 8.247562 CACTGCAATAGAGACTAGTAAACTTCT 58.752 37.037 0.00 0.00 0.00 2.85
4185 14924 8.808092 ACTGCAATAGAGACTAGTAAACTTCTT 58.192 33.333 0.00 0.00 0.00 2.52
4186 14925 8.988064 TGCAATAGAGACTAGTAAACTTCTTG 57.012 34.615 0.00 5.13 0.00 3.02
4187 14926 8.585881 TGCAATAGAGACTAGTAAACTTCTTGT 58.414 33.333 0.00 0.00 0.00 3.16
4188 14927 9.078753 GCAATAGAGACTAGTAAACTTCTTGTC 57.921 37.037 0.00 0.00 37.72 3.18
4189 14928 9.279904 CAATAGAGACTAGTAAACTTCTTGTCG 57.720 37.037 0.00 0.00 40.54 4.35
4190 14929 6.256912 AGAGACTAGTAAACTTCTTGTCGG 57.743 41.667 0.00 0.00 40.54 4.79
4191 14930 6.002704 AGAGACTAGTAAACTTCTTGTCGGA 58.997 40.000 0.00 0.00 40.54 4.55
4192 14931 6.489361 AGAGACTAGTAAACTTCTTGTCGGAA 59.511 38.462 0.00 0.00 40.54 4.30
4193 14932 7.014038 AGAGACTAGTAAACTTCTTGTCGGAAA 59.986 37.037 0.00 0.00 40.54 3.13
4194 14933 7.495055 AGACTAGTAAACTTCTTGTCGGAAAA 58.505 34.615 0.00 0.00 40.54 2.29
4195 14934 7.983484 AGACTAGTAAACTTCTTGTCGGAAAAA 59.017 33.333 0.00 0.00 40.54 1.94
4215 14954 5.985526 AAAACTGCACGCGTTATTTTATC 57.014 34.783 10.22 0.00 0.00 1.75
4216 14955 3.298489 ACTGCACGCGTTATTTTATCG 57.702 42.857 10.22 0.00 0.00 2.92
4217 14956 2.029970 ACTGCACGCGTTATTTTATCGG 59.970 45.455 10.22 0.00 0.00 4.18
4218 14957 2.001159 TGCACGCGTTATTTTATCGGT 58.999 42.857 10.22 0.00 0.00 4.69
4219 14958 3.185330 TGCACGCGTTATTTTATCGGTA 58.815 40.909 10.22 0.00 0.00 4.02
4220 14959 3.000122 TGCACGCGTTATTTTATCGGTAC 60.000 43.478 10.22 0.00 0.00 3.34
4221 14960 3.243643 GCACGCGTTATTTTATCGGTACT 59.756 43.478 10.22 0.00 0.00 2.73
4222 14961 4.743839 CACGCGTTATTTTATCGGTACTG 58.256 43.478 10.22 0.00 0.00 2.74
4223 14962 4.266029 CACGCGTTATTTTATCGGTACTGT 59.734 41.667 10.22 0.00 0.00 3.55
4224 14963 4.864247 ACGCGTTATTTTATCGGTACTGTT 59.136 37.500 5.58 0.00 0.00 3.16
4225 14964 5.348451 ACGCGTTATTTTATCGGTACTGTTT 59.652 36.000 5.58 0.00 0.00 2.83
4226 14965 6.128580 ACGCGTTATTTTATCGGTACTGTTTT 60.129 34.615 5.58 0.00 0.00 2.43
4227 14966 6.406042 CGCGTTATTTTATCGGTACTGTTTTC 59.594 38.462 0.00 0.00 0.00 2.29
4228 14967 6.406042 GCGTTATTTTATCGGTACTGTTTTCG 59.594 38.462 0.64 0.00 0.00 3.46
4229 14968 6.406042 CGTTATTTTATCGGTACTGTTTTCGC 59.594 38.462 0.64 0.00 0.00 4.70
4230 14969 7.458677 GTTATTTTATCGGTACTGTTTTCGCT 58.541 34.615 0.64 0.00 0.00 4.93
4231 14970 5.520022 TTTTATCGGTACTGTTTTCGCTC 57.480 39.130 0.64 0.00 0.00 5.03
4232 14971 4.445452 TTATCGGTACTGTTTTCGCTCT 57.555 40.909 0.64 0.00 0.00 4.09
4233 14972 5.565592 TTATCGGTACTGTTTTCGCTCTA 57.434 39.130 0.64 0.00 0.00 2.43
4234 14973 3.921119 TCGGTACTGTTTTCGCTCTAA 57.079 42.857 0.64 0.00 0.00 2.10
4235 14974 4.445452 TCGGTACTGTTTTCGCTCTAAT 57.555 40.909 0.64 0.00 0.00 1.73
4236 14975 4.813027 TCGGTACTGTTTTCGCTCTAATT 58.187 39.130 0.64 0.00 0.00 1.40
4237 14976 5.232463 TCGGTACTGTTTTCGCTCTAATTT 58.768 37.500 0.64 0.00 0.00 1.82
4238 14977 5.697633 TCGGTACTGTTTTCGCTCTAATTTT 59.302 36.000 0.64 0.00 0.00 1.82
4239 14978 6.203338 TCGGTACTGTTTTCGCTCTAATTTTT 59.797 34.615 0.64 0.00 0.00 1.94
4264 15003 3.526385 CGTTTATCGGAATGAGGCATG 57.474 47.619 0.00 0.00 35.71 4.06
4265 15004 2.872245 CGTTTATCGGAATGAGGCATGT 59.128 45.455 0.00 0.00 35.71 3.21
4266 15005 4.055360 CGTTTATCGGAATGAGGCATGTA 58.945 43.478 0.00 0.00 35.71 2.29
4267 15006 4.509970 CGTTTATCGGAATGAGGCATGTAA 59.490 41.667 0.00 0.00 35.71 2.41
4268 15007 5.179368 CGTTTATCGGAATGAGGCATGTAAT 59.821 40.000 0.00 0.00 35.71 1.89
4269 15008 6.367695 CGTTTATCGGAATGAGGCATGTAATA 59.632 38.462 0.00 0.00 35.71 0.98
4270 15009 7.064609 CGTTTATCGGAATGAGGCATGTAATAT 59.935 37.037 0.00 0.00 35.71 1.28
4271 15010 9.378551 GTTTATCGGAATGAGGCATGTAATATA 57.621 33.333 0.00 0.00 0.00 0.86
4272 15011 8.942338 TTATCGGAATGAGGCATGTAATATAC 57.058 34.615 0.00 0.00 0.00 1.47
4273 15012 5.730550 TCGGAATGAGGCATGTAATATACC 58.269 41.667 0.00 0.00 0.00 2.73
4274 15013 5.247337 TCGGAATGAGGCATGTAATATACCA 59.753 40.000 0.00 0.00 0.00 3.25
4275 15014 6.070251 TCGGAATGAGGCATGTAATATACCAT 60.070 38.462 0.00 0.00 0.00 3.55
4276 15015 6.599244 CGGAATGAGGCATGTAATATACCATT 59.401 38.462 0.00 0.00 0.00 3.16
4277 15016 7.414429 CGGAATGAGGCATGTAATATACCATTG 60.414 40.741 0.00 0.00 0.00 2.82
4278 15017 7.611467 GGAATGAGGCATGTAATATACCATTGA 59.389 37.037 0.00 0.00 0.00 2.57
4279 15018 8.938801 AATGAGGCATGTAATATACCATTGAA 57.061 30.769 0.00 0.00 0.00 2.69
4280 15019 8.938801 ATGAGGCATGTAATATACCATTGAAA 57.061 30.769 0.00 0.00 0.00 2.69
4281 15020 8.759481 TGAGGCATGTAATATACCATTGAAAA 57.241 30.769 0.00 0.00 0.00 2.29
4282 15021 8.849168 TGAGGCATGTAATATACCATTGAAAAG 58.151 33.333 0.00 0.00 0.00 2.27
4283 15022 7.661040 AGGCATGTAATATACCATTGAAAAGC 58.339 34.615 0.00 0.00 0.00 3.51
4284 15023 7.506938 AGGCATGTAATATACCATTGAAAAGCT 59.493 33.333 0.00 0.00 0.00 3.74
4285 15024 8.792633 GGCATGTAATATACCATTGAAAAGCTA 58.207 33.333 0.00 0.00 0.00 3.32
4296 15035 5.455392 CATTGAAAAGCTATGGATTAGGCG 58.545 41.667 0.00 0.00 0.00 5.52
4297 15036 2.878406 TGAAAAGCTATGGATTAGGCGC 59.122 45.455 0.00 0.00 0.00 6.53
4298 15037 2.638480 AAAGCTATGGATTAGGCGCA 57.362 45.000 10.83 0.00 0.00 6.09
4299 15038 2.638480 AAGCTATGGATTAGGCGCAA 57.362 45.000 10.83 0.00 0.00 4.85
4300 15039 1.884235 AGCTATGGATTAGGCGCAAC 58.116 50.000 10.83 0.00 0.00 4.17
4301 15040 1.417890 AGCTATGGATTAGGCGCAACT 59.582 47.619 10.83 0.00 0.00 3.16
4302 15041 2.158755 AGCTATGGATTAGGCGCAACTT 60.159 45.455 10.83 0.00 0.00 2.66
4303 15042 2.224314 GCTATGGATTAGGCGCAACTTC 59.776 50.000 10.83 0.00 0.00 3.01
4304 15043 1.299541 ATGGATTAGGCGCAACTTCG 58.700 50.000 10.83 0.00 0.00 3.79
4305 15044 0.248012 TGGATTAGGCGCAACTTCGA 59.752 50.000 10.83 0.00 0.00 3.71
4306 15045 0.651031 GGATTAGGCGCAACTTCGAC 59.349 55.000 10.83 0.00 37.86 4.20
4307 15046 1.355971 GATTAGGCGCAACTTCGACA 58.644 50.000 10.83 0.00 40.62 4.35
4308 15047 1.933853 GATTAGGCGCAACTTCGACAT 59.066 47.619 10.83 0.00 40.62 3.06
4309 15048 1.075542 TTAGGCGCAACTTCGACATG 58.924 50.000 10.83 0.00 40.62 3.21
4310 15049 0.037697 TAGGCGCAACTTCGACATGT 60.038 50.000 10.83 0.00 40.62 3.21
4311 15050 0.884704 AGGCGCAACTTCGACATGTT 60.885 50.000 10.83 0.00 40.62 2.71
4312 15051 0.725784 GGCGCAACTTCGACATGTTG 60.726 55.000 10.83 16.22 44.33 3.33
4313 15052 0.234625 GCGCAACTTCGACATGTTGA 59.765 50.000 21.68 11.98 44.29 3.18
4314 15053 1.333702 GCGCAACTTCGACATGTTGAA 60.334 47.619 24.02 24.02 44.29 2.69
4315 15054 2.298300 CGCAACTTCGACATGTTGAAC 58.702 47.619 22.25 12.80 44.29 3.18
4316 15055 2.286125 CGCAACTTCGACATGTTGAACA 60.286 45.455 22.25 0.00 44.29 3.18
4317 15056 3.035942 GCAACTTCGACATGTTGAACAC 58.964 45.455 22.25 9.79 44.29 3.32
4318 15057 3.242739 GCAACTTCGACATGTTGAACACT 60.243 43.478 22.25 8.64 44.29 3.55
4319 15058 4.730613 GCAACTTCGACATGTTGAACACTT 60.731 41.667 22.25 12.01 44.29 3.16
4320 15059 5.331902 CAACTTCGACATGTTGAACACTTT 58.668 37.500 22.25 11.41 44.29 2.66
4321 15060 5.560966 ACTTCGACATGTTGAACACTTTT 57.439 34.783 22.25 2.84 0.00 2.27
4322 15061 5.569413 ACTTCGACATGTTGAACACTTTTC 58.431 37.500 22.25 0.00 0.00 2.29
4323 15062 4.190304 TCGACATGTTGAACACTTTTCG 57.810 40.909 13.64 6.75 35.22 3.46
4324 15063 3.866327 TCGACATGTTGAACACTTTTCGA 59.134 39.130 13.64 14.45 38.65 3.71
4325 15064 4.026062 TCGACATGTTGAACACTTTTCGAG 60.026 41.667 13.64 0.00 37.03 4.04
4326 15065 4.026062 CGACATGTTGAACACTTTTCGAGA 60.026 41.667 7.36 0.00 35.68 4.04
4327 15066 5.333339 CGACATGTTGAACACTTTTCGAGAT 60.333 40.000 7.36 0.00 35.68 2.75
4328 15067 6.377327 ACATGTTGAACACTTTTCGAGATT 57.623 33.333 0.00 0.00 0.00 2.40
4329 15068 6.430451 ACATGTTGAACACTTTTCGAGATTC 58.570 36.000 0.00 0.00 0.00 2.52
4330 15069 5.418310 TGTTGAACACTTTTCGAGATTCC 57.582 39.130 0.00 0.00 0.00 3.01
4331 15070 4.878971 TGTTGAACACTTTTCGAGATTCCA 59.121 37.500 0.00 0.00 0.00 3.53
4332 15071 5.205565 GTTGAACACTTTTCGAGATTCCAC 58.794 41.667 0.00 0.00 0.00 4.02
4333 15072 4.447290 TGAACACTTTTCGAGATTCCACA 58.553 39.130 0.00 0.00 0.00 4.17
4334 15073 4.272504 TGAACACTTTTCGAGATTCCACAC 59.727 41.667 0.00 0.00 0.00 3.82
4335 15074 2.800544 ACACTTTTCGAGATTCCACACG 59.199 45.455 0.00 0.00 0.00 4.49
4336 15075 2.157668 CACTTTTCGAGATTCCACACGG 59.842 50.000 0.00 0.00 0.00 4.94
4337 15076 2.224209 ACTTTTCGAGATTCCACACGGT 60.224 45.455 0.00 0.00 0.00 4.83
4338 15077 2.536761 TTTCGAGATTCCACACGGTT 57.463 45.000 0.00 0.00 0.00 4.44
4339 15078 2.536761 TTCGAGATTCCACACGGTTT 57.463 45.000 0.00 0.00 0.00 3.27
4340 15079 3.663995 TTCGAGATTCCACACGGTTTA 57.336 42.857 0.00 0.00 0.00 2.01
4341 15080 3.663995 TCGAGATTCCACACGGTTTAA 57.336 42.857 0.00 0.00 0.00 1.52
4342 15081 3.581755 TCGAGATTCCACACGGTTTAAG 58.418 45.455 0.00 0.00 0.00 1.85
4343 15082 3.256383 TCGAGATTCCACACGGTTTAAGA 59.744 43.478 0.00 0.00 0.00 2.10
4344 15083 3.612860 CGAGATTCCACACGGTTTAAGAG 59.387 47.826 0.00 0.00 0.00 2.85
4345 15084 3.335579 AGATTCCACACGGTTTAAGAGC 58.664 45.455 0.00 0.00 0.00 4.09
4346 15085 2.623878 TTCCACACGGTTTAAGAGCA 57.376 45.000 0.00 0.00 0.00 4.26
4347 15086 2.163818 TCCACACGGTTTAAGAGCAG 57.836 50.000 0.00 0.00 0.00 4.24
4348 15087 1.414919 TCCACACGGTTTAAGAGCAGT 59.585 47.619 0.00 0.00 0.00 4.40
4349 15088 2.158871 TCCACACGGTTTAAGAGCAGTT 60.159 45.455 0.00 0.00 0.00 3.16
4350 15089 2.616842 CCACACGGTTTAAGAGCAGTTT 59.383 45.455 0.00 0.00 0.00 2.66
4351 15090 3.066203 CCACACGGTTTAAGAGCAGTTTT 59.934 43.478 0.00 0.00 0.00 2.43
4352 15091 4.273969 CCACACGGTTTAAGAGCAGTTTTA 59.726 41.667 0.00 0.00 0.00 1.52
4353 15092 5.220892 CCACACGGTTTAAGAGCAGTTTTAA 60.221 40.000 0.00 0.00 0.00 1.52
4354 15093 6.259638 CACACGGTTTAAGAGCAGTTTTAAA 58.740 36.000 0.00 0.00 0.00 1.52
4355 15094 6.748198 CACACGGTTTAAGAGCAGTTTTAAAA 59.252 34.615 0.00 0.00 32.39 1.52
4356 15095 7.273815 CACACGGTTTAAGAGCAGTTTTAAAAA 59.726 33.333 1.31 0.00 32.39 1.94
4357 15096 7.977293 ACACGGTTTAAGAGCAGTTTTAAAAAT 59.023 29.630 1.31 0.00 32.39 1.82
4358 15097 9.453325 CACGGTTTAAGAGCAGTTTTAAAAATA 57.547 29.630 1.31 0.00 32.39 1.40
4359 15098 9.673454 ACGGTTTAAGAGCAGTTTTAAAAATAG 57.327 29.630 1.31 0.00 32.39 1.73
4360 15099 9.673454 CGGTTTAAGAGCAGTTTTAAAAATAGT 57.327 29.630 1.31 0.00 32.39 2.12
4363 15102 8.722342 TTAAGAGCAGTTTTAAAAATAGTGCG 57.278 30.769 1.31 0.00 34.61 5.34
4364 15103 5.699839 AGAGCAGTTTTAAAAATAGTGCGG 58.300 37.500 1.31 0.00 34.61 5.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 7.040132 GGACCAATTCCCAGAATGAATATCTTC 60.040 40.741 0.00 0.00 38.70 2.87
4 5 6.581171 GGACCAATTCCCAGAATGAATATC 57.419 41.667 0.00 0.00 38.70 1.63
17 18 3.380320 CCTAAAACATCGGGACCAATTCC 59.620 47.826 0.00 0.00 45.00 3.01
18 19 4.266714 TCCTAAAACATCGGGACCAATTC 58.733 43.478 0.00 0.00 0.00 2.17
19 20 4.270008 CTCCTAAAACATCGGGACCAATT 58.730 43.478 0.00 0.00 0.00 2.32
20 21 3.371595 CCTCCTAAAACATCGGGACCAAT 60.372 47.826 0.00 0.00 0.00 3.16
21 22 2.026636 CCTCCTAAAACATCGGGACCAA 60.027 50.000 0.00 0.00 0.00 3.67
23 24 1.835531 TCCTCCTAAAACATCGGGACC 59.164 52.381 0.00 0.00 0.00 4.46
26 27 2.092914 AGCTTCCTCCTAAAACATCGGG 60.093 50.000 0.00 0.00 0.00 5.14
27 28 3.268023 AGCTTCCTCCTAAAACATCGG 57.732 47.619 0.00 0.00 0.00 4.18
61 62 7.966753 CGTCTTGTGTACTTACATATGTGTACT 59.033 37.037 25.21 9.12 40.40 2.73
62 63 7.253552 GCGTCTTGTGTACTTACATATGTGTAC 60.254 40.741 21.28 21.28 40.40 2.90
77 78 4.988065 GCTGGAGCGTCTTGTGTA 57.012 55.556 0.00 0.00 0.00 2.90
103 104 2.564975 CTTCACGTAGCCGTCCGT 59.435 61.111 0.00 0.00 46.28 4.69
116 117 4.280174 GCACGAGTATAGTATTCCCCTTCA 59.720 45.833 0.00 0.00 0.00 3.02
117 118 4.615452 CGCACGAGTATAGTATTCCCCTTC 60.615 50.000 0.00 0.00 0.00 3.46
120 121 2.555757 ACGCACGAGTATAGTATTCCCC 59.444 50.000 0.00 0.00 0.00 4.81
121 122 3.365767 GGACGCACGAGTATAGTATTCCC 60.366 52.174 0.00 0.00 0.00 3.97
122 123 3.666374 CGGACGCACGAGTATAGTATTCC 60.666 52.174 0.00 0.00 35.47 3.01
131 132 2.738139 TCGTCGGACGCACGAGTA 60.738 61.111 24.76 3.67 44.42 2.59
135 136 3.785499 TCTCTCGTCGGACGCACG 61.785 66.667 24.76 15.11 42.21 5.34
204 205 4.065088 ACGATGCTTGCTCTGTTTCTTTA 58.935 39.130 0.00 0.00 0.00 1.85
206 207 2.481952 GACGATGCTTGCTCTGTTTCTT 59.518 45.455 0.00 0.00 0.00 2.52
208 209 1.201855 CGACGATGCTTGCTCTGTTTC 60.202 52.381 0.00 0.00 0.00 2.78
210 211 1.016130 CCGACGATGCTTGCTCTGTT 61.016 55.000 0.00 0.00 0.00 3.16
213 214 2.185350 CCCGACGATGCTTGCTCT 59.815 61.111 0.00 0.00 0.00 4.09
324 329 2.604382 GGCCAAGCCCACCAACAT 60.604 61.111 0.00 0.00 44.06 2.71
390 395 4.580551 CATCCGTACGTCGCCCCC 62.581 72.222 15.21 0.00 38.35 5.40
391 396 3.830192 ACATCCGTACGTCGCCCC 61.830 66.667 15.21 0.00 38.35 5.80
392 397 2.581409 CACATCCGTACGTCGCCC 60.581 66.667 15.21 0.00 38.35 6.13
394 399 1.005294 ACAACACATCCGTACGTCGC 61.005 55.000 15.21 0.00 38.35 5.19
395 400 1.411394 AACAACACATCCGTACGTCG 58.589 50.000 15.21 4.40 39.52 5.12
396 401 2.540931 ACAAACAACACATCCGTACGTC 59.459 45.455 15.21 0.00 0.00 4.34
465 2959 1.615262 CCCACCCAATTCCTCCTCC 59.385 63.158 0.00 0.00 0.00 4.30
618 3128 7.042456 CGAATTGAATCGATCACCTTCACTTAT 60.042 37.037 0.00 0.00 45.48 1.73
639 3324 3.819564 TTCCATCTCCACGATCGAATT 57.180 42.857 24.34 0.00 26.43 2.17
758 7140 0.037326 AAGGATTTCTCGCGAGCACA 60.037 50.000 30.97 16.88 0.00 4.57
801 7220 3.485877 GCTGATTGATTCCTTCCGTTTCG 60.486 47.826 0.00 0.00 0.00 3.46
802 7221 3.691609 AGCTGATTGATTCCTTCCGTTTC 59.308 43.478 0.00 0.00 0.00 2.78
803 7222 3.690460 AGCTGATTGATTCCTTCCGTTT 58.310 40.909 0.00 0.00 0.00 3.60
804 7223 3.356529 AGCTGATTGATTCCTTCCGTT 57.643 42.857 0.00 0.00 0.00 4.44
805 7224 4.446371 CTTAGCTGATTGATTCCTTCCGT 58.554 43.478 0.00 0.00 0.00 4.69
826 7245 2.251818 CGACCCAGTCCATCATATCCT 58.748 52.381 0.00 0.00 0.00 3.24
827 7246 1.276421 CCGACCCAGTCCATCATATCC 59.724 57.143 0.00 0.00 0.00 2.59
828 7247 1.971357 ACCGACCCAGTCCATCATATC 59.029 52.381 0.00 0.00 0.00 1.63
829 7248 2.103153 ACCGACCCAGTCCATCATAT 57.897 50.000 0.00 0.00 0.00 1.78
830 7249 1.874129 AACCGACCCAGTCCATCATA 58.126 50.000 0.00 0.00 0.00 2.15
831 7250 0.991920 AAACCGACCCAGTCCATCAT 59.008 50.000 0.00 0.00 0.00 2.45
871 9072 1.516161 CATCGTCCTACCGATCCGTA 58.484 55.000 0.00 0.00 45.25 4.02
883 9084 0.389166 GCTCGATCCATCCATCGTCC 60.389 60.000 3.00 0.00 44.99 4.79
890 9091 4.487714 TTAATATGGGCTCGATCCATCC 57.512 45.455 19.62 3.81 43.36 3.51
912 9113 3.396570 CGGCTCCGGGGGTTTACT 61.397 66.667 1.90 0.00 35.56 2.24
1138 11529 0.677842 AACGCCTGGTCGTAGAAGTT 59.322 50.000 14.69 0.00 42.46 2.66
1251 11648 1.315257 GGGCGATGGTGTTGAGCATT 61.315 55.000 0.00 0.00 40.47 3.56
1476 11903 3.138930 GAGCATGACGGCGAGGCTA 62.139 63.158 16.62 0.00 39.27 3.93
1630 12066 0.321996 AAGTCGTCCTCTTTGAGCCC 59.678 55.000 0.00 0.00 0.00 5.19
1732 12174 4.794439 CGGGCTCATCGTCACGCA 62.794 66.667 0.00 0.00 0.00 5.24
1739 12181 4.899239 GACAGGGCGGGCTCATCG 62.899 72.222 0.26 0.00 0.00 3.84
1776 12218 4.469945 ACATGGAGAATCGACCCTTTTCTA 59.530 41.667 0.00 0.00 34.37 2.10
1786 12228 5.453339 GGTTCTTATGGACATGGAGAATCGA 60.453 44.000 12.74 0.00 34.37 3.59
1802 12244 1.808390 GCGGCGTCGTGGTTCTTAT 60.808 57.895 12.58 0.00 38.89 1.73
1853 12325 1.271597 GGGCAGTGGAAGTGATCTTGT 60.272 52.381 0.00 0.00 40.62 3.16
1856 12331 0.908198 GAGGGCAGTGGAAGTGATCT 59.092 55.000 0.00 0.00 40.62 2.75
1863 12338 1.920325 CCAGGAGAGGGCAGTGGAA 60.920 63.158 0.00 0.00 0.00 3.53
1890 12366 4.819761 TGCAGCGACGAGATGGGC 62.820 66.667 0.00 0.00 36.61 5.36
1941 12420 1.523258 CAGGCCATCTGCTCTTCCG 60.523 63.158 5.01 0.00 40.92 4.30
2019 12507 1.491668 TACCTTGGAGGCGCATCTTA 58.508 50.000 22.57 8.74 39.63 2.10
2064 12552 2.033141 GTGGGCAGCAGCTTGAGA 59.967 61.111 0.00 0.00 41.70 3.27
2095 12583 2.819595 GAGGAAGCCGCGCATGAA 60.820 61.111 8.75 0.00 0.00 2.57
2153 12641 3.181472 CCAGATGGAGTTGACGATGATGA 60.181 47.826 0.00 0.00 37.39 2.92
2201 12689 1.886542 TCTTGCTGCGTTCAGACTCTA 59.113 47.619 0.00 0.00 42.95 2.43
2312 12800 2.528127 TTGAGAACTGGGGGCCGA 60.528 61.111 0.00 0.00 0.00 5.54
2360 12863 9.399797 ACATGTCAACAATATCACATCTTGTAT 57.600 29.630 0.00 0.00 33.01 2.29
2373 12876 6.807720 GTGATGATTGCAACATGTCAACAATA 59.192 34.615 16.45 9.01 31.40 1.90
2425 12931 1.664321 GCCTTGGCAGCTTCATGGAG 61.664 60.000 17.73 0.00 32.96 3.86
2497 13003 1.880271 CTTCGCTCATCAGGCATCAT 58.120 50.000 0.00 0.00 0.00 2.45
2520 13026 2.496871 CTCAGTCATCAAGGAGAGCAGT 59.503 50.000 0.00 0.00 0.00 4.40
2572 13078 5.127845 ACCTCATACGAAGAGTCATGTCATT 59.872 40.000 0.00 0.00 0.00 2.57
2583 13089 2.418609 CCACATGCACCTCATACGAAGA 60.419 50.000 0.00 0.00 33.19 2.87
2596 13102 0.528924 GAGCATTTGAGCCACATGCA 59.471 50.000 20.86 0.00 46.20 3.96
2645 13160 5.989777 CGAGACTCTGGAAAAAGTTTAGGAA 59.010 40.000 0.03 0.00 0.00 3.36
2727 13251 4.821805 TCCTTCAACACCTGTTCAATCTTC 59.178 41.667 0.00 0.00 35.83 2.87
2837 13387 3.563808 ACAAAGCAAGCATGTCGAGTAAA 59.436 39.130 0.00 0.00 0.00 2.01
2847 13397 3.005791 GGTTCCTACAACAAAGCAAGCAT 59.994 43.478 0.00 0.00 0.00 3.79
2927 13480 1.740380 CGGTAGCACATCTCACCCAAG 60.740 57.143 0.00 0.00 0.00 3.61
2954 13507 4.821260 TGCAAATCAGAAGTAGCAGTGAAA 59.179 37.500 0.00 0.00 0.00 2.69
3088 13644 1.081242 GCCAATCAACTGTGCCACG 60.081 57.895 0.00 0.00 0.00 4.94
3098 13654 7.168219 ACACAAGATAGTAAGAAGCCAATCAA 58.832 34.615 0.00 0.00 0.00 2.57
3113 13669 7.965655 CAGTGAGACTACTACAACACAAGATAG 59.034 40.741 0.00 0.00 0.00 2.08
3200 13756 7.735917 TCATCAGGATACATAATTTTCCTCGT 58.264 34.615 0.00 0.00 36.45 4.18
3212 13768 4.736611 ATTTGGCCTCATCAGGATACAT 57.263 40.909 3.32 0.00 43.65 2.29
3226 13782 1.733526 GTGCGGGATGTATTTGGCC 59.266 57.895 0.00 0.00 0.00 5.36
3250 13806 4.211986 CGGGTTCCGTAATGGGTG 57.788 61.111 0.00 0.00 42.73 4.61
3396 13968 2.395988 ATCACACACAAGCTCGCCCA 62.396 55.000 0.00 0.00 0.00 5.36
3428 14000 8.728833 GCATATATAGTACTACGGTCTGACTTT 58.271 37.037 4.31 0.00 0.00 2.66
3524 14107 3.395639 ACCAAACATGCATGCAGAAAAG 58.604 40.909 26.69 14.84 0.00 2.27
3530 14113 0.603172 GGCAACCAAACATGCATGCA 60.603 50.000 26.53 25.04 44.32 3.96
3572 14156 0.801872 GCACGGACACATGCATAACA 59.198 50.000 0.00 0.00 41.65 2.41
3573 14157 0.098728 GGCACGGACACATGCATAAC 59.901 55.000 0.00 0.00 43.93 1.89
3574 14158 0.035534 AGGCACGGACACATGCATAA 60.036 50.000 0.00 0.00 43.93 1.90
3634 14372 8.915057 ATATATTCATCATAACCATAGCAGCC 57.085 34.615 0.00 0.00 0.00 4.85
3716 14455 3.813240 GCACCCTGGATGATGAATAGCAT 60.813 47.826 0.00 0.00 40.77 3.79
3717 14456 2.487805 GCACCCTGGATGATGAATAGCA 60.488 50.000 0.00 0.00 0.00 3.49
3718 14457 2.157738 GCACCCTGGATGATGAATAGC 58.842 52.381 0.00 0.00 0.00 2.97
3719 14458 3.072038 TCTGCACCCTGGATGATGAATAG 59.928 47.826 0.00 0.00 0.00 1.73
3720 14459 3.047857 TCTGCACCCTGGATGATGAATA 58.952 45.455 0.00 0.00 0.00 1.75
3721 14460 1.848388 TCTGCACCCTGGATGATGAAT 59.152 47.619 0.00 0.00 0.00 2.57
3722 14461 1.288188 TCTGCACCCTGGATGATGAA 58.712 50.000 0.00 0.00 0.00 2.57
3723 14462 1.288188 TTCTGCACCCTGGATGATGA 58.712 50.000 0.00 0.00 0.00 2.92
3724 14463 2.359981 ATTCTGCACCCTGGATGATG 57.640 50.000 0.00 0.00 0.00 3.07
3725 14464 3.461085 AGTTATTCTGCACCCTGGATGAT 59.539 43.478 0.00 0.00 0.00 2.45
3726 14465 2.846206 AGTTATTCTGCACCCTGGATGA 59.154 45.455 0.00 0.00 0.00 2.92
3727 14466 3.287867 AGTTATTCTGCACCCTGGATG 57.712 47.619 0.00 0.00 0.00 3.51
3728 14467 5.653255 ATAAGTTATTCTGCACCCTGGAT 57.347 39.130 0.00 0.00 0.00 3.41
3729 14468 5.437060 GAATAAGTTATTCTGCACCCTGGA 58.563 41.667 22.93 0.00 41.00 3.86
3730 14469 5.757850 GAATAAGTTATTCTGCACCCTGG 57.242 43.478 22.93 0.00 41.00 4.45
3738 14477 7.848201 ACCTCGGGTGAAGAATAAGTTATTCTG 60.848 40.741 30.00 19.59 43.39 3.02
3739 14478 6.156429 ACCTCGGGTGAAGAATAAGTTATTCT 59.844 38.462 25.91 25.91 44.74 2.40
3740 14479 6.346896 ACCTCGGGTGAAGAATAAGTTATTC 58.653 40.000 22.80 22.80 38.76 1.75
3741 14480 6.309389 ACCTCGGGTGAAGAATAAGTTATT 57.691 37.500 7.87 7.87 32.98 1.40
3742 14481 5.952347 ACCTCGGGTGAAGAATAAGTTAT 57.048 39.130 0.00 0.00 32.98 1.89
3743 14482 6.855763 TTACCTCGGGTGAAGAATAAGTTA 57.144 37.500 5.90 0.00 36.19 2.24
3744 14483 5.750352 TTACCTCGGGTGAAGAATAAGTT 57.250 39.130 5.90 0.00 36.19 2.66
3745 14484 5.661759 AGATTACCTCGGGTGAAGAATAAGT 59.338 40.000 5.90 0.00 36.19 2.24
3746 14485 6.163135 AGATTACCTCGGGTGAAGAATAAG 57.837 41.667 5.90 0.00 36.19 1.73
3747 14486 6.555463 AAGATTACCTCGGGTGAAGAATAA 57.445 37.500 5.90 0.00 36.19 1.40
3748 14487 6.238842 CGTAAGATTACCTCGGGTGAAGAATA 60.239 42.308 5.90 0.00 36.23 1.75
3749 14488 5.451520 CGTAAGATTACCTCGGGTGAAGAAT 60.452 44.000 5.90 0.00 36.23 2.40
3750 14489 4.142315 CGTAAGATTACCTCGGGTGAAGAA 60.142 45.833 5.90 0.00 36.23 2.52
3751 14490 3.379372 CGTAAGATTACCTCGGGTGAAGA 59.621 47.826 5.90 0.00 36.23 2.87
3752 14491 3.379372 TCGTAAGATTACCTCGGGTGAAG 59.621 47.826 5.90 0.00 45.01 3.02
3753 14492 3.355378 TCGTAAGATTACCTCGGGTGAA 58.645 45.455 5.90 0.00 45.01 3.18
3754 14493 3.003394 TCGTAAGATTACCTCGGGTGA 57.997 47.619 5.90 0.00 45.01 4.02
3809 14548 9.961265 CGTAGTGAATGAATAGGAATGTAACTA 57.039 33.333 0.00 0.00 0.00 2.24
3810 14549 8.475639 ACGTAGTGAATGAATAGGAATGTAACT 58.524 33.333 0.00 0.00 42.51 2.24
3811 14550 8.644318 ACGTAGTGAATGAATAGGAATGTAAC 57.356 34.615 0.00 0.00 42.51 2.50
3862 14601 8.296713 GCAAATTTTCTTGTCTTGTGACCTATA 58.703 33.333 0.00 0.00 42.28 1.31
3863 14602 7.147976 GCAAATTTTCTTGTCTTGTGACCTAT 58.852 34.615 0.00 0.00 42.28 2.57
3864 14603 6.503524 GCAAATTTTCTTGTCTTGTGACCTA 58.496 36.000 0.00 0.00 42.28 3.08
3865 14604 5.351458 GCAAATTTTCTTGTCTTGTGACCT 58.649 37.500 0.00 0.00 42.28 3.85
3866 14605 4.207019 CGCAAATTTTCTTGTCTTGTGACC 59.793 41.667 0.00 0.00 42.28 4.02
3867 14606 4.207019 CCGCAAATTTTCTTGTCTTGTGAC 59.793 41.667 0.00 0.00 43.20 3.67
3868 14607 4.142271 ACCGCAAATTTTCTTGTCTTGTGA 60.142 37.500 0.00 0.00 30.82 3.58
3869 14608 4.111916 ACCGCAAATTTTCTTGTCTTGTG 58.888 39.130 0.00 0.00 0.00 3.33
3870 14609 4.385358 ACCGCAAATTTTCTTGTCTTGT 57.615 36.364 0.00 0.00 0.00 3.16
3871 14610 5.717038 AAACCGCAAATTTTCTTGTCTTG 57.283 34.783 0.00 0.00 0.00 3.02
3872 14611 6.983890 ACATAAACCGCAAATTTTCTTGTCTT 59.016 30.769 0.00 0.00 0.00 3.01
3873 14612 6.420604 CACATAAACCGCAAATTTTCTTGTCT 59.579 34.615 0.00 0.00 0.00 3.41
3874 14613 6.200097 ACACATAAACCGCAAATTTTCTTGTC 59.800 34.615 0.00 0.00 0.00 3.18
3875 14614 6.045955 ACACATAAACCGCAAATTTTCTTGT 58.954 32.000 0.00 0.00 0.00 3.16
3876 14615 6.523676 ACACATAAACCGCAAATTTTCTTG 57.476 33.333 0.00 0.00 0.00 3.02
3877 14616 8.825667 AATACACATAAACCGCAAATTTTCTT 57.174 26.923 0.00 0.00 0.00 2.52
3878 14617 8.825667 AAATACACATAAACCGCAAATTTTCT 57.174 26.923 0.00 0.00 0.00 2.52
3881 14620 9.477484 TGTAAAATACACATAAACCGCAAATTT 57.523 25.926 0.00 0.00 32.89 1.82
3951 14690 8.957028 CCGTAAGAAAATATACAATCGTCGTAA 58.043 33.333 0.00 0.00 43.02 3.18
3952 14691 8.128582 ACCGTAAGAAAATATACAATCGTCGTA 58.871 33.333 0.00 0.00 43.02 3.43
3953 14692 6.974622 ACCGTAAGAAAATATACAATCGTCGT 59.025 34.615 0.00 0.00 43.02 4.34
3954 14693 7.377928 AGACCGTAAGAAAATATACAATCGTCG 59.622 37.037 0.00 0.00 43.02 5.12
3955 14694 8.571461 AGACCGTAAGAAAATATACAATCGTC 57.429 34.615 0.00 0.00 43.02 4.20
3956 14695 8.411683 AGAGACCGTAAGAAAATATACAATCGT 58.588 33.333 0.00 0.00 43.02 3.73
3957 14696 8.798748 AGAGACCGTAAGAAAATATACAATCG 57.201 34.615 0.00 0.00 43.02 3.34
3966 14705 8.440833 CGACATAAAAAGAGACCGTAAGAAAAT 58.559 33.333 0.00 0.00 43.02 1.82
3967 14706 7.652909 TCGACATAAAAAGAGACCGTAAGAAAA 59.347 33.333 0.00 0.00 43.02 2.29
3968 14707 7.147312 TCGACATAAAAAGAGACCGTAAGAAA 58.853 34.615 0.00 0.00 43.02 2.52
3969 14708 6.680810 TCGACATAAAAAGAGACCGTAAGAA 58.319 36.000 0.00 0.00 43.02 2.52
3970 14709 6.258230 TCGACATAAAAAGAGACCGTAAGA 57.742 37.500 0.00 0.00 43.02 2.10
3971 14710 6.939551 TTCGACATAAAAAGAGACCGTAAG 57.060 37.500 0.00 0.00 0.00 2.34
3972 14711 7.712264 TTTTCGACATAAAAAGAGACCGTAA 57.288 32.000 0.00 0.00 0.00 3.18
3973 14712 7.894376 ATTTTCGACATAAAAAGAGACCGTA 57.106 32.000 0.00 0.00 32.42 4.02
3974 14713 6.796705 ATTTTCGACATAAAAAGAGACCGT 57.203 33.333 0.00 0.00 32.42 4.83
3975 14714 7.425595 GCTTATTTTCGACATAAAAAGAGACCG 59.574 37.037 0.00 0.00 32.42 4.79
3976 14715 8.234546 TGCTTATTTTCGACATAAAAAGAGACC 58.765 33.333 0.00 0.00 32.42 3.85
3977 14716 9.607285 TTGCTTATTTTCGACATAAAAAGAGAC 57.393 29.630 0.00 0.00 32.42 3.36
3985 14724 9.320406 CGTAAGTTTTGCTTATTTTCGACATAA 57.680 29.630 0.00 0.00 41.25 1.90
3986 14725 8.710551 TCGTAAGTTTTGCTTATTTTCGACATA 58.289 29.630 0.00 0.00 41.25 2.29
3987 14726 7.577979 TCGTAAGTTTTGCTTATTTTCGACAT 58.422 30.769 0.00 0.00 41.25 3.06
3988 14727 6.946165 TCGTAAGTTTTGCTTATTTTCGACA 58.054 32.000 0.00 0.00 41.25 4.35
3989 14728 7.825627 TTCGTAAGTTTTGCTTATTTTCGAC 57.174 32.000 0.00 0.00 41.25 4.20
3990 14729 7.110490 CGTTTCGTAAGTTTTGCTTATTTTCGA 59.890 33.333 0.00 0.00 41.25 3.71
3991 14730 7.097329 ACGTTTCGTAAGTTTTGCTTATTTTCG 60.097 33.333 0.00 0.00 41.25 3.46
3992 14731 8.042482 ACGTTTCGTAAGTTTTGCTTATTTTC 57.958 30.769 0.00 0.00 41.25 2.29
3993 14732 7.974243 ACGTTTCGTAAGTTTTGCTTATTTT 57.026 28.000 0.00 0.00 41.25 1.82
4023 14762 9.923143 CCTCTATTTTACCATCAATACATCGTA 57.077 33.333 0.00 0.00 0.00 3.43
4024 14763 7.878127 CCCTCTATTTTACCATCAATACATCGT 59.122 37.037 0.00 0.00 0.00 3.73
4025 14764 7.334421 CCCCTCTATTTTACCATCAATACATCG 59.666 40.741 0.00 0.00 0.00 3.84
4026 14765 7.611855 CCCCCTCTATTTTACCATCAATACATC 59.388 40.741 0.00 0.00 0.00 3.06
4027 14766 7.075009 ACCCCCTCTATTTTACCATCAATACAT 59.925 37.037 0.00 0.00 0.00 2.29
4028 14767 6.391649 ACCCCCTCTATTTTACCATCAATACA 59.608 38.462 0.00 0.00 0.00 2.29
4029 14768 6.849151 ACCCCCTCTATTTTACCATCAATAC 58.151 40.000 0.00 0.00 0.00 1.89
4030 14769 8.584326 TTACCCCCTCTATTTTACCATCAATA 57.416 34.615 0.00 0.00 0.00 1.90
4031 14770 7.474474 TTACCCCCTCTATTTTACCATCAAT 57.526 36.000 0.00 0.00 0.00 2.57
4032 14771 6.911993 TTACCCCCTCTATTTTACCATCAA 57.088 37.500 0.00 0.00 0.00 2.57
4033 14772 6.911993 TTTACCCCCTCTATTTTACCATCA 57.088 37.500 0.00 0.00 0.00 3.07
4034 14773 9.516546 CTATTTTACCCCCTCTATTTTACCATC 57.483 37.037 0.00 0.00 0.00 3.51
4035 14774 9.244978 TCTATTTTACCCCCTCTATTTTACCAT 57.755 33.333 0.00 0.00 0.00 3.55
4036 14775 8.496916 GTCTATTTTACCCCCTCTATTTTACCA 58.503 37.037 0.00 0.00 0.00 3.25
4037 14776 7.658982 CGTCTATTTTACCCCCTCTATTTTACC 59.341 40.741 0.00 0.00 0.00 2.85
4038 14777 7.658982 CCGTCTATTTTACCCCCTCTATTTTAC 59.341 40.741 0.00 0.00 0.00 2.01
4039 14778 7.348011 ACCGTCTATTTTACCCCCTCTATTTTA 59.652 37.037 0.00 0.00 0.00 1.52
4040 14779 6.159222 ACCGTCTATTTTACCCCCTCTATTTT 59.841 38.462 0.00 0.00 0.00 1.82
4041 14780 5.668991 ACCGTCTATTTTACCCCCTCTATTT 59.331 40.000 0.00 0.00 0.00 1.40
4042 14781 5.222086 ACCGTCTATTTTACCCCCTCTATT 58.778 41.667 0.00 0.00 0.00 1.73
4043 14782 4.824276 ACCGTCTATTTTACCCCCTCTAT 58.176 43.478 0.00 0.00 0.00 1.98
4044 14783 4.078980 AGACCGTCTATTTTACCCCCTCTA 60.079 45.833 0.00 0.00 0.00 2.43
4045 14784 3.036819 GACCGTCTATTTTACCCCCTCT 58.963 50.000 0.00 0.00 0.00 3.69
4046 14785 3.036819 AGACCGTCTATTTTACCCCCTC 58.963 50.000 0.00 0.00 0.00 4.30
4047 14786 3.126323 AGACCGTCTATTTTACCCCCT 57.874 47.619 0.00 0.00 0.00 4.79
4048 14787 5.306419 AGAATAGACCGTCTATTTTACCCCC 59.694 44.000 27.11 16.19 46.46 5.40
4049 14788 6.221659 CAGAATAGACCGTCTATTTTACCCC 58.778 44.000 27.11 16.73 46.46 4.95
4050 14789 5.695363 GCAGAATAGACCGTCTATTTTACCC 59.305 44.000 27.11 17.28 46.46 3.69
4051 14790 6.514063 AGCAGAATAGACCGTCTATTTTACC 58.486 40.000 27.11 17.56 46.46 2.85
4052 14791 9.694137 ATTAGCAGAATAGACCGTCTATTTTAC 57.306 33.333 27.11 19.15 46.46 2.01
4086 14825 7.489113 CCAAAATGGTGTGCAGAATAGTTATTC 59.511 37.037 4.12 4.12 36.59 1.75
4087 14826 7.322664 CCAAAATGGTGTGCAGAATAGTTATT 58.677 34.615 0.00 0.00 31.35 1.40
4088 14827 6.627953 GCCAAAATGGTGTGCAGAATAGTTAT 60.628 38.462 0.00 0.00 40.46 1.89
4089 14828 5.336372 GCCAAAATGGTGTGCAGAATAGTTA 60.336 40.000 0.00 0.00 40.46 2.24
4090 14829 4.561326 GCCAAAATGGTGTGCAGAATAGTT 60.561 41.667 0.00 0.00 40.46 2.24
4091 14830 3.056607 GCCAAAATGGTGTGCAGAATAGT 60.057 43.478 0.00 0.00 40.46 2.12
4092 14831 3.056678 TGCCAAAATGGTGTGCAGAATAG 60.057 43.478 0.00 0.00 40.46 1.73
4093 14832 2.896044 TGCCAAAATGGTGTGCAGAATA 59.104 40.909 0.00 0.00 40.46 1.75
4094 14833 1.693062 TGCCAAAATGGTGTGCAGAAT 59.307 42.857 0.00 0.00 40.46 2.40
4095 14834 1.117994 TGCCAAAATGGTGTGCAGAA 58.882 45.000 0.00 0.00 40.46 3.02
4096 14835 0.388659 GTGCCAAAATGGTGTGCAGA 59.611 50.000 0.00 0.00 40.46 4.26
4097 14836 0.390124 AGTGCCAAAATGGTGTGCAG 59.610 50.000 0.00 0.00 40.46 4.41
4098 14837 0.104487 CAGTGCCAAAATGGTGTGCA 59.896 50.000 0.00 0.00 40.46 4.57
4099 14838 1.223417 GCAGTGCCAAAATGGTGTGC 61.223 55.000 2.85 1.79 40.46 4.57
4100 14839 0.104487 TGCAGTGCCAAAATGGTGTG 59.896 50.000 13.72 0.00 40.46 3.82
4101 14840 0.104671 GTGCAGTGCCAAAATGGTGT 59.895 50.000 13.72 0.00 40.46 4.16
4102 14841 0.940519 CGTGCAGTGCCAAAATGGTG 60.941 55.000 13.72 0.00 40.46 4.17
4103 14842 1.363443 CGTGCAGTGCCAAAATGGT 59.637 52.632 13.72 0.00 40.46 3.55
4104 14843 2.023223 GCGTGCAGTGCCAAAATGG 61.023 57.895 13.72 0.00 41.55 3.16
4105 14844 1.005294 GAGCGTGCAGTGCCAAAATG 61.005 55.000 13.72 0.00 0.00 2.32
4106 14845 1.286880 GAGCGTGCAGTGCCAAAAT 59.713 52.632 13.72 0.00 0.00 1.82
4107 14846 1.661498 TTGAGCGTGCAGTGCCAAAA 61.661 50.000 13.72 0.00 0.00 2.44
4108 14847 2.117779 TTGAGCGTGCAGTGCCAAA 61.118 52.632 13.72 0.00 0.00 3.28
4109 14848 2.515757 TTGAGCGTGCAGTGCCAA 60.516 55.556 13.72 6.14 0.00 4.52
4110 14849 3.279116 GTTGAGCGTGCAGTGCCA 61.279 61.111 13.72 0.00 0.00 4.92
4111 14850 3.245948 CTGTTGAGCGTGCAGTGCC 62.246 63.158 13.72 2.92 0.00 5.01
4112 14851 1.775039 TTCTGTTGAGCGTGCAGTGC 61.775 55.000 8.58 8.58 0.00 4.40
4113 14852 0.234106 CTTCTGTTGAGCGTGCAGTG 59.766 55.000 0.00 0.00 0.00 3.66
4114 14853 1.502163 GCTTCTGTTGAGCGTGCAGT 61.502 55.000 0.00 0.00 0.00 4.40
4115 14854 1.206072 GCTTCTGTTGAGCGTGCAG 59.794 57.895 0.00 0.00 0.00 4.41
4116 14855 2.597713 CGCTTCTGTTGAGCGTGCA 61.598 57.895 10.06 0.00 45.59 4.57
4117 14856 2.171940 CGCTTCTGTTGAGCGTGC 59.828 61.111 10.06 0.00 45.59 5.34
4121 14860 1.206072 CAGTGCGCTTCTGTTGAGC 59.794 57.895 19.53 0.00 0.00 4.26
4122 14861 1.206072 GCAGTGCGCTTCTGTTGAG 59.794 57.895 25.03 8.35 37.77 3.02
4123 14862 0.886043 ATGCAGTGCGCTTCTGTTGA 60.886 50.000 25.03 14.87 43.06 3.18
4124 14863 0.453950 GATGCAGTGCGCTTCTGTTG 60.454 55.000 25.03 10.54 43.06 3.33
4125 14864 0.886043 TGATGCAGTGCGCTTCTGTT 60.886 50.000 25.03 17.01 43.50 3.16
4126 14865 0.675837 ATGATGCAGTGCGCTTCTGT 60.676 50.000 25.03 12.89 43.50 3.41
4127 14866 0.450583 AATGATGCAGTGCGCTTCTG 59.549 50.000 22.11 22.11 43.50 3.02
4128 14867 1.171308 AAATGATGCAGTGCGCTTCT 58.829 45.000 9.73 4.18 43.50 2.85
4129 14868 1.652124 CAAAATGATGCAGTGCGCTTC 59.348 47.619 9.73 8.02 43.43 3.86
4130 14869 1.270274 TCAAAATGATGCAGTGCGCTT 59.730 42.857 9.73 0.47 43.06 4.68
4131 14870 0.883153 TCAAAATGATGCAGTGCGCT 59.117 45.000 9.73 0.00 43.06 5.92
4132 14871 0.986992 GTCAAAATGATGCAGTGCGC 59.013 50.000 11.20 0.00 42.89 6.09
4133 14872 1.136000 TCGTCAAAATGATGCAGTGCG 60.136 47.619 11.20 0.00 33.54 5.34
4134 14873 2.245096 GTCGTCAAAATGATGCAGTGC 58.755 47.619 8.58 8.58 33.54 4.40
4135 14874 2.157474 TCGTCGTCAAAATGATGCAGTG 59.843 45.455 0.00 0.00 33.54 3.66
4136 14875 2.412870 TCGTCGTCAAAATGATGCAGT 58.587 42.857 0.00 0.00 33.54 4.40
4137 14876 2.785681 GCTCGTCGTCAAAATGATGCAG 60.786 50.000 0.00 0.00 33.54 4.41
4138 14877 1.128507 GCTCGTCGTCAAAATGATGCA 59.871 47.619 0.00 0.00 33.54 3.96
4139 14878 1.128507 TGCTCGTCGTCAAAATGATGC 59.871 47.619 0.00 0.00 33.54 3.91
4140 14879 2.413112 AGTGCTCGTCGTCAAAATGATG 59.587 45.455 0.00 0.00 34.78 3.07
4141 14880 2.413112 CAGTGCTCGTCGTCAAAATGAT 59.587 45.455 0.00 0.00 0.00 2.45
4142 14881 1.792367 CAGTGCTCGTCGTCAAAATGA 59.208 47.619 0.00 0.00 0.00 2.57
4143 14882 1.722751 GCAGTGCTCGTCGTCAAAATG 60.723 52.381 8.18 0.00 0.00 2.32
4144 14883 0.512952 GCAGTGCTCGTCGTCAAAAT 59.487 50.000 8.18 0.00 0.00 1.82
4145 14884 0.808060 TGCAGTGCTCGTCGTCAAAA 60.808 50.000 17.60 0.00 0.00 2.44
4146 14885 0.808060 TTGCAGTGCTCGTCGTCAAA 60.808 50.000 17.60 0.00 0.00 2.69
4147 14886 0.599991 ATTGCAGTGCTCGTCGTCAA 60.600 50.000 17.60 0.00 0.00 3.18
4148 14887 0.242555 TATTGCAGTGCTCGTCGTCA 59.757 50.000 17.60 0.00 0.00 4.35
4149 14888 0.917259 CTATTGCAGTGCTCGTCGTC 59.083 55.000 17.60 0.00 0.00 4.20
4150 14889 0.526211 TCTATTGCAGTGCTCGTCGT 59.474 50.000 17.60 0.00 0.00 4.34
4151 14890 1.195347 CTCTATTGCAGTGCTCGTCG 58.805 55.000 17.60 1.32 0.00 5.12
4152 14891 2.159310 AGTCTCTATTGCAGTGCTCGTC 60.159 50.000 17.60 0.00 0.00 4.20
4153 14892 1.821753 AGTCTCTATTGCAGTGCTCGT 59.178 47.619 17.60 4.73 0.00 4.18
4154 14893 2.575694 AGTCTCTATTGCAGTGCTCG 57.424 50.000 17.60 2.05 0.00 5.03
4155 14894 4.647424 ACTAGTCTCTATTGCAGTGCTC 57.353 45.455 17.60 0.00 0.00 4.26
4156 14895 6.153680 AGTTTACTAGTCTCTATTGCAGTGCT 59.846 38.462 17.60 0.00 0.00 4.40
4157 14896 6.334202 AGTTTACTAGTCTCTATTGCAGTGC 58.666 40.000 8.58 8.58 0.00 4.40
4158 14897 8.247562 AGAAGTTTACTAGTCTCTATTGCAGTG 58.752 37.037 0.00 0.00 0.00 3.66
4159 14898 8.356000 AGAAGTTTACTAGTCTCTATTGCAGT 57.644 34.615 0.00 0.00 0.00 4.40
4160 14899 9.081997 CAAGAAGTTTACTAGTCTCTATTGCAG 57.918 37.037 0.00 0.00 0.00 4.41
4161 14900 8.585881 ACAAGAAGTTTACTAGTCTCTATTGCA 58.414 33.333 0.00 0.00 0.00 4.08
4162 14901 8.989653 ACAAGAAGTTTACTAGTCTCTATTGC 57.010 34.615 0.00 0.00 0.00 3.56
4163 14902 9.279904 CGACAAGAAGTTTACTAGTCTCTATTG 57.720 37.037 0.00 8.03 0.00 1.90
4164 14903 8.460428 CCGACAAGAAGTTTACTAGTCTCTATT 58.540 37.037 0.00 0.00 0.00 1.73
4165 14904 7.828223 TCCGACAAGAAGTTTACTAGTCTCTAT 59.172 37.037 0.00 0.00 0.00 1.98
4166 14905 7.164122 TCCGACAAGAAGTTTACTAGTCTCTA 58.836 38.462 0.00 0.00 0.00 2.43
4167 14906 6.002704 TCCGACAAGAAGTTTACTAGTCTCT 58.997 40.000 0.00 0.00 0.00 3.10
4168 14907 6.251655 TCCGACAAGAAGTTTACTAGTCTC 57.748 41.667 0.00 0.00 0.00 3.36
4169 14908 6.645790 TTCCGACAAGAAGTTTACTAGTCT 57.354 37.500 0.00 0.00 0.00 3.24
4170 14909 7.704789 TTTTCCGACAAGAAGTTTACTAGTC 57.295 36.000 0.00 0.00 0.00 2.59
4192 14931 5.058734 CGATAAAATAACGCGTGCAGTTTTT 59.941 36.000 14.98 16.05 33.42 1.94
4193 14932 4.551892 CGATAAAATAACGCGTGCAGTTTT 59.448 37.500 14.98 18.64 33.42 2.43
4194 14933 4.085884 CGATAAAATAACGCGTGCAGTTT 58.914 39.130 14.98 17.73 33.42 2.66
4195 14934 3.484557 CCGATAAAATAACGCGTGCAGTT 60.485 43.478 14.98 6.76 35.75 3.16
4196 14935 2.029970 CCGATAAAATAACGCGTGCAGT 59.970 45.455 14.98 0.00 0.00 4.40
4197 14936 2.029970 ACCGATAAAATAACGCGTGCAG 59.970 45.455 14.98 0.00 0.00 4.41
4198 14937 2.001159 ACCGATAAAATAACGCGTGCA 58.999 42.857 14.98 3.89 0.00 4.57
4199 14938 2.724744 ACCGATAAAATAACGCGTGC 57.275 45.000 14.98 0.00 0.00 5.34
4200 14939 4.266029 ACAGTACCGATAAAATAACGCGTG 59.734 41.667 14.98 0.00 0.00 5.34
4201 14940 4.423732 ACAGTACCGATAAAATAACGCGT 58.576 39.130 5.58 5.58 0.00 6.01
4202 14941 5.379757 AACAGTACCGATAAAATAACGCG 57.620 39.130 3.53 3.53 0.00 6.01
4203 14942 6.406042 CGAAAACAGTACCGATAAAATAACGC 59.594 38.462 0.00 0.00 0.00 4.84
4204 14943 6.406042 GCGAAAACAGTACCGATAAAATAACG 59.594 38.462 0.00 0.00 0.00 3.18
4205 14944 7.458677 AGCGAAAACAGTACCGATAAAATAAC 58.541 34.615 0.00 0.00 0.00 1.89
4206 14945 7.546667 AGAGCGAAAACAGTACCGATAAAATAA 59.453 33.333 0.00 0.00 0.00 1.40
4207 14946 7.037438 AGAGCGAAAACAGTACCGATAAAATA 58.963 34.615 0.00 0.00 0.00 1.40
4208 14947 5.873164 AGAGCGAAAACAGTACCGATAAAAT 59.127 36.000 0.00 0.00 0.00 1.82
4209 14948 5.232463 AGAGCGAAAACAGTACCGATAAAA 58.768 37.500 0.00 0.00 0.00 1.52
4210 14949 4.813027 AGAGCGAAAACAGTACCGATAAA 58.187 39.130 0.00 0.00 0.00 1.40
4211 14950 4.445452 AGAGCGAAAACAGTACCGATAA 57.555 40.909 0.00 0.00 0.00 1.75
4212 14951 5.565592 TTAGAGCGAAAACAGTACCGATA 57.434 39.130 0.00 0.00 0.00 2.92
4213 14952 4.445452 TTAGAGCGAAAACAGTACCGAT 57.555 40.909 0.00 0.00 0.00 4.18
4214 14953 3.921119 TTAGAGCGAAAACAGTACCGA 57.079 42.857 0.00 0.00 0.00 4.69
4215 14954 5.526010 AAATTAGAGCGAAAACAGTACCG 57.474 39.130 0.00 0.00 0.00 4.02
4244 14983 2.872245 ACATGCCTCATTCCGATAAACG 59.128 45.455 0.00 0.00 42.18 3.60
4245 14984 6.560253 ATTACATGCCTCATTCCGATAAAC 57.440 37.500 0.00 0.00 0.00 2.01
4246 14985 9.378551 GTATATTACATGCCTCATTCCGATAAA 57.621 33.333 0.00 0.00 0.00 1.40
4247 14986 7.985184 GGTATATTACATGCCTCATTCCGATAA 59.015 37.037 0.00 0.00 0.00 1.75
4248 14987 7.125053 TGGTATATTACATGCCTCATTCCGATA 59.875 37.037 0.00 0.00 0.00 2.92
4249 14988 6.070251 TGGTATATTACATGCCTCATTCCGAT 60.070 38.462 0.00 0.00 0.00 4.18
4250 14989 5.247337 TGGTATATTACATGCCTCATTCCGA 59.753 40.000 0.00 0.00 0.00 4.55
4251 14990 5.487433 TGGTATATTACATGCCTCATTCCG 58.513 41.667 0.00 0.00 0.00 4.30
4252 14991 7.611467 TCAATGGTATATTACATGCCTCATTCC 59.389 37.037 0.00 0.00 0.00 3.01
4253 14992 8.565896 TCAATGGTATATTACATGCCTCATTC 57.434 34.615 0.00 0.00 0.00 2.67
4254 14993 8.938801 TTCAATGGTATATTACATGCCTCATT 57.061 30.769 0.00 0.00 0.00 2.57
4255 14994 8.938801 TTTCAATGGTATATTACATGCCTCAT 57.061 30.769 0.00 0.00 0.00 2.90
4256 14995 8.759481 TTTTCAATGGTATATTACATGCCTCA 57.241 30.769 0.00 0.00 0.00 3.86
4257 14996 7.809806 GCTTTTCAATGGTATATTACATGCCTC 59.190 37.037 0.00 0.00 0.00 4.70
4258 14997 7.506938 AGCTTTTCAATGGTATATTACATGCCT 59.493 33.333 0.00 0.00 0.00 4.75
4259 14998 7.661040 AGCTTTTCAATGGTATATTACATGCC 58.339 34.615 0.00 0.00 0.00 4.40
4268 15007 9.739276 CCTAATCCATAGCTTTTCAATGGTATA 57.261 33.333 11.39 6.22 34.23 1.47
4269 15008 7.177392 GCCTAATCCATAGCTTTTCAATGGTAT 59.823 37.037 11.39 5.52 34.23 2.73
4270 15009 6.490040 GCCTAATCCATAGCTTTTCAATGGTA 59.510 38.462 11.39 1.10 34.23 3.25
4271 15010 5.302823 GCCTAATCCATAGCTTTTCAATGGT 59.697 40.000 11.39 0.00 34.23 3.55
4272 15011 5.563475 CGCCTAATCCATAGCTTTTCAATGG 60.563 44.000 6.16 6.16 0.00 3.16
4273 15012 5.455392 CGCCTAATCCATAGCTTTTCAATG 58.545 41.667 0.00 0.00 0.00 2.82
4274 15013 4.022849 GCGCCTAATCCATAGCTTTTCAAT 60.023 41.667 0.00 0.00 0.00 2.57
4275 15014 3.315191 GCGCCTAATCCATAGCTTTTCAA 59.685 43.478 0.00 0.00 0.00 2.69
4276 15015 2.878406 GCGCCTAATCCATAGCTTTTCA 59.122 45.455 0.00 0.00 0.00 2.69
4277 15016 2.878406 TGCGCCTAATCCATAGCTTTTC 59.122 45.455 4.18 0.00 0.00 2.29
4278 15017 2.930950 TGCGCCTAATCCATAGCTTTT 58.069 42.857 4.18 0.00 0.00 2.27
4279 15018 2.618709 GTTGCGCCTAATCCATAGCTTT 59.381 45.455 4.18 0.00 0.00 3.51
4280 15019 2.158755 AGTTGCGCCTAATCCATAGCTT 60.159 45.455 4.18 0.00 0.00 3.74
4281 15020 1.417890 AGTTGCGCCTAATCCATAGCT 59.582 47.619 4.18 0.00 0.00 3.32
4282 15021 1.884235 AGTTGCGCCTAATCCATAGC 58.116 50.000 4.18 0.00 0.00 2.97
4283 15022 2.476619 CGAAGTTGCGCCTAATCCATAG 59.523 50.000 4.18 0.00 0.00 2.23
4284 15023 2.101750 TCGAAGTTGCGCCTAATCCATA 59.898 45.455 4.18 0.00 0.00 2.74
4285 15024 1.134521 TCGAAGTTGCGCCTAATCCAT 60.135 47.619 4.18 0.00 0.00 3.41
4286 15025 0.248012 TCGAAGTTGCGCCTAATCCA 59.752 50.000 4.18 0.00 0.00 3.41
4287 15026 0.651031 GTCGAAGTTGCGCCTAATCC 59.349 55.000 4.18 0.00 0.00 3.01
4288 15027 1.355971 TGTCGAAGTTGCGCCTAATC 58.644 50.000 4.18 0.00 0.00 1.75
4289 15028 1.665679 CATGTCGAAGTTGCGCCTAAT 59.334 47.619 4.18 0.00 0.00 1.73
4290 15029 1.075542 CATGTCGAAGTTGCGCCTAA 58.924 50.000 4.18 0.00 0.00 2.69
4291 15030 0.037697 ACATGTCGAAGTTGCGCCTA 60.038 50.000 4.18 0.00 0.00 3.93
4292 15031 0.884704 AACATGTCGAAGTTGCGCCT 60.885 50.000 4.18 0.00 0.00 5.52
4293 15032 0.725784 CAACATGTCGAAGTTGCGCC 60.726 55.000 4.18 0.00 38.69 6.53
4294 15033 0.234625 TCAACATGTCGAAGTTGCGC 59.765 50.000 17.15 0.00 43.55 6.09
4295 15034 2.286125 TGTTCAACATGTCGAAGTTGCG 60.286 45.455 17.15 0.00 43.55 4.85
4296 15035 3.035942 GTGTTCAACATGTCGAAGTTGC 58.964 45.455 17.15 8.59 43.55 4.17
4297 15036 4.536364 AGTGTTCAACATGTCGAAGTTG 57.464 40.909 16.28 16.28 44.84 3.16
4298 15037 5.560966 AAAGTGTTCAACATGTCGAAGTT 57.439 34.783 0.00 0.00 0.00 2.66
4299 15038 5.560966 AAAAGTGTTCAACATGTCGAAGT 57.439 34.783 0.00 0.00 0.00 3.01
4300 15039 4.666176 CGAAAAGTGTTCAACATGTCGAAG 59.334 41.667 0.00 0.00 0.00 3.79
4301 15040 4.330347 TCGAAAAGTGTTCAACATGTCGAA 59.670 37.500 4.26 0.00 31.16 3.71
4302 15041 3.866327 TCGAAAAGTGTTCAACATGTCGA 59.134 39.130 0.00 2.79 31.42 4.20
4303 15042 4.026062 TCTCGAAAAGTGTTCAACATGTCG 60.026 41.667 0.00 0.00 0.00 4.35
4304 15043 5.403897 TCTCGAAAAGTGTTCAACATGTC 57.596 39.130 0.00 0.00 0.00 3.06
4305 15044 6.377327 AATCTCGAAAAGTGTTCAACATGT 57.623 33.333 0.00 0.00 0.00 3.21
4306 15045 5.853282 GGAATCTCGAAAAGTGTTCAACATG 59.147 40.000 0.00 0.00 0.00 3.21
4307 15046 5.530915 TGGAATCTCGAAAAGTGTTCAACAT 59.469 36.000 0.00 0.00 0.00 2.71
4308 15047 4.878971 TGGAATCTCGAAAAGTGTTCAACA 59.121 37.500 0.00 0.00 0.00 3.33
4309 15048 5.205565 GTGGAATCTCGAAAAGTGTTCAAC 58.794 41.667 0.00 0.00 0.00 3.18
4310 15049 4.878971 TGTGGAATCTCGAAAAGTGTTCAA 59.121 37.500 0.00 0.00 0.00 2.69
4311 15050 4.272504 GTGTGGAATCTCGAAAAGTGTTCA 59.727 41.667 0.00 0.00 0.00 3.18
4312 15051 4.608445 CGTGTGGAATCTCGAAAAGTGTTC 60.608 45.833 0.00 0.00 0.00 3.18
4313 15052 3.247648 CGTGTGGAATCTCGAAAAGTGTT 59.752 43.478 0.00 0.00 0.00 3.32
4314 15053 2.800544 CGTGTGGAATCTCGAAAAGTGT 59.199 45.455 0.00 0.00 0.00 3.55
4315 15054 2.157668 CCGTGTGGAATCTCGAAAAGTG 59.842 50.000 0.00 0.00 37.49 3.16
4316 15055 2.224209 ACCGTGTGGAATCTCGAAAAGT 60.224 45.455 0.00 0.00 39.21 2.66
4317 15056 2.413837 ACCGTGTGGAATCTCGAAAAG 58.586 47.619 0.00 0.00 39.21 2.27
4318 15057 2.536761 ACCGTGTGGAATCTCGAAAA 57.463 45.000 0.00 0.00 39.21 2.29
4319 15058 2.536761 AACCGTGTGGAATCTCGAAA 57.463 45.000 0.00 0.00 39.21 3.46
4320 15059 2.536761 AAACCGTGTGGAATCTCGAA 57.463 45.000 0.00 0.00 39.21 3.71
4321 15060 3.256383 TCTTAAACCGTGTGGAATCTCGA 59.744 43.478 0.00 0.00 39.21 4.04
4322 15061 3.581755 TCTTAAACCGTGTGGAATCTCG 58.418 45.455 0.00 0.00 39.21 4.04
4323 15062 3.371285 GCTCTTAAACCGTGTGGAATCTC 59.629 47.826 0.00 0.00 39.21 2.75
4324 15063 3.244422 TGCTCTTAAACCGTGTGGAATCT 60.244 43.478 0.00 0.00 39.21 2.40
4325 15064 3.071479 TGCTCTTAAACCGTGTGGAATC 58.929 45.455 0.00 0.00 39.21 2.52
4326 15065 3.074412 CTGCTCTTAAACCGTGTGGAAT 58.926 45.455 0.00 0.00 39.21 3.01
4327 15066 2.158871 ACTGCTCTTAAACCGTGTGGAA 60.159 45.455 0.00 0.00 39.21 3.53
4328 15067 1.414919 ACTGCTCTTAAACCGTGTGGA 59.585 47.619 0.00 0.00 39.21 4.02
4329 15068 1.878953 ACTGCTCTTAAACCGTGTGG 58.121 50.000 0.00 0.00 42.84 4.17
4330 15069 3.963383 AAACTGCTCTTAAACCGTGTG 57.037 42.857 0.00 0.00 0.00 3.82
4331 15070 6.439675 TTTAAAACTGCTCTTAAACCGTGT 57.560 33.333 0.00 0.00 0.00 4.49
4332 15071 7.743520 TTTTTAAAACTGCTCTTAAACCGTG 57.256 32.000 0.00 0.00 29.11 4.94
4333 15072 9.673454 CTATTTTTAAAACTGCTCTTAAACCGT 57.327 29.630 0.00 0.00 29.11 4.83
4334 15073 9.673454 ACTATTTTTAAAACTGCTCTTAAACCG 57.327 29.630 0.00 0.00 29.11 4.44
4337 15076 9.176181 CGCACTATTTTTAAAACTGCTCTTAAA 57.824 29.630 0.00 0.00 0.00 1.52
4338 15077 7.806014 CCGCACTATTTTTAAAACTGCTCTTAA 59.194 33.333 0.00 0.00 0.00 1.85
4339 15078 7.302524 CCGCACTATTTTTAAAACTGCTCTTA 58.697 34.615 0.00 0.00 0.00 2.10
4340 15079 6.149633 CCGCACTATTTTTAAAACTGCTCTT 58.850 36.000 0.00 0.00 0.00 2.85
4341 15080 5.699839 CCGCACTATTTTTAAAACTGCTCT 58.300 37.500 0.00 0.00 0.00 4.09
4342 15081 5.992489 CCGCACTATTTTTAAAACTGCTC 57.008 39.130 0.00 0.00 0.00 4.26


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.