Multiple sequence alignment - TraesCS4A01G376800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G376800 chr4A 100.000 3476 0 0 1 3476 651567140 651570615 0.000000e+00 6420.0
1 TraesCS4A01G376800 chr4A 87.500 416 50 2 1915 2329 651622722 651623136 2.430000e-131 479.0
2 TraesCS4A01G376800 chr4A 87.805 123 15 0 2355 2477 651470170 651470048 1.010000e-30 145.0
3 TraesCS4A01G376800 chr7D 94.609 1688 77 10 803 2477 43241468 43243154 0.000000e+00 2601.0
4 TraesCS4A01G376800 chr7D 93.182 616 35 5 1 612 509902671 509902059 0.000000e+00 898.0
5 TraesCS4A01G376800 chr7D 93.008 615 38 4 1 612 174792704 174792092 0.000000e+00 893.0
6 TraesCS4A01G376800 chr7D 87.500 304 21 5 3175 3476 43243861 43244149 5.560000e-88 335.0
7 TraesCS4A01G376800 chr7D 87.726 277 19 8 2480 2747 43243190 43243460 3.370000e-80 309.0
8 TraesCS4A01G376800 chr7D 77.283 427 61 24 2355 2747 43221716 43221292 5.840000e-53 219.0
9 TraesCS4A01G376800 chr7D 84.000 225 34 2 2917 3141 484931140 484930918 7.560000e-52 215.0
10 TraesCS4A01G376800 chr7D 84.071 226 33 2 2917 3141 517337053 517336830 7.560000e-52 215.0
11 TraesCS4A01G376800 chr7A 92.262 1835 93 18 788 2581 43132531 43130705 0.000000e+00 2556.0
12 TraesCS4A01G376800 chr7A 84.444 225 31 2 2917 3141 121554175 121553955 5.840000e-53 219.0
13 TraesCS4A01G376800 chr7A 89.655 87 9 0 1131 1217 422485598 422485512 1.020000e-20 111.0
14 TraesCS4A01G376800 chr6B 93.638 613 37 2 1 612 286751398 286752009 0.000000e+00 915.0
15 TraesCS4A01G376800 chr6B 93.333 615 36 4 1 612 526740024 526740636 0.000000e+00 904.0
16 TraesCS4A01G376800 chr6B 92.846 615 40 4 1 613 704376660 704377272 0.000000e+00 889.0
17 TraesCS4A01G376800 chr6B 76.850 527 102 13 1426 1945 719900897 719901410 2.640000e-71 279.0
18 TraesCS4A01G376800 chrUn 93.031 617 40 3 1 614 30343926 30344542 0.000000e+00 898.0
19 TraesCS4A01G376800 chr7B 93.042 618 38 4 1 613 716137510 716136893 0.000000e+00 898.0
20 TraesCS4A01G376800 chr3B 92.892 619 37 6 1 612 760400623 760401241 0.000000e+00 893.0
21 TraesCS4A01G376800 chr3B 92.941 85 6 0 1133 1217 42759504 42759420 1.310000e-24 124.0
22 TraesCS4A01G376800 chr3B 90.278 72 5 2 1147 1217 662471461 662471531 3.690000e-15 93.5
23 TraesCS4A01G376800 chr2B 92.581 620 44 2 1 618 448586495 448587114 0.000000e+00 889.0
24 TraesCS4A01G376800 chr2B 91.549 71 6 0 2826 2896 94653096 94653026 7.940000e-17 99.0
25 TraesCS4A01G376800 chr2B 86.517 89 11 1 2725 2813 503760806 503760893 2.860000e-16 97.1
26 TraesCS4A01G376800 chr2B 82.418 91 12 4 2725 2813 446295902 446295814 3.720000e-10 76.8
27 TraesCS4A01G376800 chr1D 84.211 228 33 3 2917 3144 221023393 221023617 5.840000e-53 219.0
28 TraesCS4A01G376800 chr4D 83.406 229 34 3 2916 3143 337426234 337426009 3.520000e-50 209.0
29 TraesCS4A01G376800 chr4B 83.333 228 33 4 2917 3143 67057317 67057540 4.550000e-49 206.0
30 TraesCS4A01G376800 chr1A 83.111 225 35 3 2917 3141 469212297 469212076 5.880000e-48 202.0
31 TraesCS4A01G376800 chr3D 82.251 231 35 5 2917 3147 398414375 398414151 9.840000e-46 195.0
32 TraesCS4A01G376800 chr3D 92.135 89 7 0 1129 1217 564174857 564174945 3.640000e-25 126.0
33 TraesCS4A01G376800 chr2A 82.018 228 38 2 2917 3143 750627849 750628074 1.270000e-44 191.0
34 TraesCS4A01G376800 chr3A 93.103 87 6 0 1131 1217 665978382 665978468 1.010000e-25 128.0
35 TraesCS4A01G376800 chr3A 91.667 84 7 0 1134 1217 715408588 715408505 2.190000e-22 117.0
36 TraesCS4A01G376800 chr3A 88.506 87 10 0 1131 1217 698743759 698743845 4.740000e-19 106.0
37 TraesCS4A01G376800 chr2D 89.247 93 7 2 2822 2911 543287636 543287728 2.840000e-21 113.0
38 TraesCS4A01G376800 chr1B 88.889 90 8 1 2822 2909 112414265 112414176 3.670000e-20 110.0
39 TraesCS4A01G376800 chr5D 88.732 71 8 0 2839 2909 244639537 244639467 1.720000e-13 87.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G376800 chr4A 651567140 651570615 3475 False 6420.000000 6420 100.000 1 3476 1 chr4A.!!$F1 3475
1 TraesCS4A01G376800 chr7D 43241468 43244149 2681 False 1081.666667 2601 89.945 803 3476 3 chr7D.!!$F1 2673
2 TraesCS4A01G376800 chr7D 509902059 509902671 612 True 898.000000 898 93.182 1 612 1 chr7D.!!$R4 611
3 TraesCS4A01G376800 chr7D 174792092 174792704 612 True 893.000000 893 93.008 1 612 1 chr7D.!!$R2 611
4 TraesCS4A01G376800 chr7A 43130705 43132531 1826 True 2556.000000 2556 92.262 788 2581 1 chr7A.!!$R1 1793
5 TraesCS4A01G376800 chr6B 286751398 286752009 611 False 915.000000 915 93.638 1 612 1 chr6B.!!$F1 611
6 TraesCS4A01G376800 chr6B 526740024 526740636 612 False 904.000000 904 93.333 1 612 1 chr6B.!!$F2 611
7 TraesCS4A01G376800 chr6B 704376660 704377272 612 False 889.000000 889 92.846 1 613 1 chr6B.!!$F3 612
8 TraesCS4A01G376800 chr6B 719900897 719901410 513 False 279.000000 279 76.850 1426 1945 1 chr6B.!!$F4 519
9 TraesCS4A01G376800 chrUn 30343926 30344542 616 False 898.000000 898 93.031 1 614 1 chrUn.!!$F1 613
10 TraesCS4A01G376800 chr7B 716136893 716137510 617 True 898.000000 898 93.042 1 613 1 chr7B.!!$R1 612
11 TraesCS4A01G376800 chr3B 760400623 760401241 618 False 893.000000 893 92.892 1 612 1 chr3B.!!$F2 611
12 TraesCS4A01G376800 chr2B 448586495 448587114 619 False 889.000000 889 92.581 1 618 1 chr2B.!!$F1 617

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
973 989 0.594028 TCTTATCTACCTTGCGCGCG 60.594 55.0 28.44 28.44 0.0 6.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2856 2933 0.036952 CCCTATGTCCGGCTATGCTG 60.037 60.0 0.0 0.0 34.23 4.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
205 210 7.007367 CACGACAATTTTAAGTGCATGTATCAC 59.993 37.037 0.00 0.00 34.80 3.06
250 255 7.039784 TGCATGGCAAGTCTAGTTTCTTAATTT 60.040 33.333 0.00 0.00 34.76 1.82
354 361 3.942539 CATGGCAATTCATGTGCAATG 57.057 42.857 9.14 9.14 44.72 2.82
461 473 4.455877 GTGGTGAAAACGGATCTTCAATCT 59.544 41.667 0.00 0.00 33.52 2.40
552 565 3.493129 GCGATGACGTGGCAATCTATTTA 59.507 43.478 0.00 0.00 41.98 1.40
565 578 9.602568 TGGCAATCTATTTACATTAAAGACGTA 57.397 29.630 0.00 0.00 0.00 3.57
614 627 1.206132 TGGCAGTTATCGACGTCCAAT 59.794 47.619 10.58 6.65 33.60 3.16
618 631 4.357142 GCAGTTATCGACGTCCAATAAGA 58.643 43.478 10.58 0.00 0.00 2.10
619 632 4.802039 GCAGTTATCGACGTCCAATAAGAA 59.198 41.667 10.58 0.00 0.00 2.52
620 633 5.462398 GCAGTTATCGACGTCCAATAAGAAT 59.538 40.000 10.58 1.90 0.00 2.40
621 634 6.639686 GCAGTTATCGACGTCCAATAAGAATA 59.360 38.462 10.58 0.00 0.00 1.75
622 635 7.148950 GCAGTTATCGACGTCCAATAAGAATAG 60.149 40.741 10.58 4.67 0.00 1.73
623 636 8.074370 CAGTTATCGACGTCCAATAAGAATAGA 58.926 37.037 10.58 0.00 0.00 1.98
624 637 8.291032 AGTTATCGACGTCCAATAAGAATAGAG 58.709 37.037 10.58 0.00 0.00 2.43
625 638 5.434352 TCGACGTCCAATAAGAATAGAGG 57.566 43.478 10.58 0.00 0.00 3.69
626 639 4.885907 TCGACGTCCAATAAGAATAGAGGT 59.114 41.667 10.58 0.00 0.00 3.85
627 640 5.008415 TCGACGTCCAATAAGAATAGAGGTC 59.992 44.000 10.58 0.00 38.40 3.85
628 641 5.530712 GACGTCCAATAAGAATAGAGGTCC 58.469 45.833 3.51 0.00 36.73 4.46
629 642 4.344390 ACGTCCAATAAGAATAGAGGTCCC 59.656 45.833 0.00 0.00 0.00 4.46
630 643 4.589374 CGTCCAATAAGAATAGAGGTCCCT 59.411 45.833 0.00 0.00 0.00 4.20
631 644 5.773680 CGTCCAATAAGAATAGAGGTCCCTA 59.226 44.000 0.00 0.00 0.00 3.53
632 645 6.267014 CGTCCAATAAGAATAGAGGTCCCTAA 59.733 42.308 0.00 0.00 0.00 2.69
633 646 7.443477 GTCCAATAAGAATAGAGGTCCCTAAC 58.557 42.308 0.00 0.00 0.00 2.34
699 712 8.571461 AGAAATCGATTGGGTATAGTATACGA 57.429 34.615 12.25 7.32 0.00 3.43
700 713 9.186837 AGAAATCGATTGGGTATAGTATACGAT 57.813 33.333 12.25 9.03 39.10 3.73
701 714 9.448294 GAAATCGATTGGGTATAGTATACGATC 57.552 37.037 12.25 13.68 37.06 3.69
702 715 6.594284 TCGATTGGGTATAGTATACGATCG 57.406 41.667 26.39 26.39 0.00 3.69
703 716 6.340522 TCGATTGGGTATAGTATACGATCGA 58.659 40.000 28.40 28.40 34.03 3.59
704 717 6.478016 TCGATTGGGTATAGTATACGATCGAG 59.522 42.308 28.40 16.00 32.87 4.04
705 718 6.257411 CGATTGGGTATAGTATACGATCGAGT 59.743 42.308 27.26 12.03 0.00 4.18
706 719 7.201591 CGATTGGGTATAGTATACGATCGAGTT 60.202 40.741 27.26 8.24 0.00 3.01
707 720 6.974932 TGGGTATAGTATACGATCGAGTTC 57.025 41.667 24.34 9.34 0.00 3.01
708 721 5.877012 TGGGTATAGTATACGATCGAGTTCC 59.123 44.000 24.34 10.39 0.00 3.62
709 722 5.295540 GGGTATAGTATACGATCGAGTTCCC 59.704 48.000 24.34 15.03 0.00 3.97
710 723 5.295540 GGTATAGTATACGATCGAGTTCCCC 59.704 48.000 24.34 6.39 0.00 4.81
711 724 2.149578 AGTATACGATCGAGTTCCCCG 58.850 52.381 24.34 0.00 0.00 5.73
712 725 0.877071 TATACGATCGAGTTCCCCGC 59.123 55.000 24.34 0.00 0.00 6.13
713 726 2.126417 ATACGATCGAGTTCCCCGCG 62.126 60.000 24.34 0.00 37.75 6.46
717 730 2.735883 TCGAGTTCCCCGCGAAAA 59.264 55.556 8.23 0.00 42.56 2.29
718 731 1.069427 TCGAGTTCCCCGCGAAAAA 59.931 52.632 8.23 0.00 42.56 1.94
719 732 0.947180 TCGAGTTCCCCGCGAAAAAG 60.947 55.000 8.23 0.00 42.56 2.27
720 733 0.947180 CGAGTTCCCCGCGAAAAAGA 60.947 55.000 8.23 0.00 38.82 2.52
721 734 1.232119 GAGTTCCCCGCGAAAAAGAA 58.768 50.000 8.23 0.00 30.39 2.52
722 735 1.605232 GAGTTCCCCGCGAAAAAGAAA 59.395 47.619 8.23 0.00 30.39 2.52
723 736 2.025898 AGTTCCCCGCGAAAAAGAAAA 58.974 42.857 8.23 0.00 30.39 2.29
724 737 2.427812 AGTTCCCCGCGAAAAAGAAAAA 59.572 40.909 8.23 0.00 30.39 1.94
725 738 2.785713 TCCCCGCGAAAAAGAAAAAG 57.214 45.000 8.23 0.00 0.00 2.27
726 739 2.299521 TCCCCGCGAAAAAGAAAAAGA 58.700 42.857 8.23 0.00 0.00 2.52
727 740 2.888414 TCCCCGCGAAAAAGAAAAAGAT 59.112 40.909 8.23 0.00 0.00 2.40
728 741 3.319689 TCCCCGCGAAAAAGAAAAAGATT 59.680 39.130 8.23 0.00 0.00 2.40
729 742 3.673338 CCCCGCGAAAAAGAAAAAGATTC 59.327 43.478 8.23 0.00 0.00 2.52
730 743 3.360758 CCCGCGAAAAAGAAAAAGATTCG 59.639 43.478 8.23 0.00 44.06 3.34
731 744 3.360758 CCGCGAAAAAGAAAAAGATTCGG 59.639 43.478 8.23 0.00 42.15 4.30
732 745 3.972502 CGCGAAAAAGAAAAAGATTCGGT 59.027 39.130 0.00 0.00 42.15 4.69
733 746 5.141568 CGCGAAAAAGAAAAAGATTCGGTA 58.858 37.500 0.00 0.00 42.15 4.02
734 747 5.793457 CGCGAAAAAGAAAAAGATTCGGTAT 59.207 36.000 0.00 0.00 42.15 2.73
735 748 6.957077 CGCGAAAAAGAAAAAGATTCGGTATA 59.043 34.615 0.00 0.00 42.15 1.47
736 749 7.045804 CGCGAAAAAGAAAAAGATTCGGTATAC 60.046 37.037 0.00 0.00 42.15 1.47
737 750 7.045804 GCGAAAAAGAAAAAGATTCGGTATACG 60.046 37.037 8.10 0.00 42.15 3.06
751 764 4.494350 GGTATACGAGTAGGAATCGCAA 57.506 45.455 0.00 0.00 43.91 4.85
752 765 4.225208 GGTATACGAGTAGGAATCGCAAC 58.775 47.826 0.00 0.00 43.91 4.17
753 766 4.023365 GGTATACGAGTAGGAATCGCAACT 60.023 45.833 0.00 0.00 43.91 3.16
754 767 2.279582 ACGAGTAGGAATCGCAACTG 57.720 50.000 0.00 0.00 43.91 3.16
755 768 1.544691 ACGAGTAGGAATCGCAACTGT 59.455 47.619 0.00 0.00 43.91 3.55
756 769 2.029290 ACGAGTAGGAATCGCAACTGTT 60.029 45.455 0.00 0.00 43.91 3.16
757 770 2.599082 CGAGTAGGAATCGCAACTGTTC 59.401 50.000 0.00 0.00 32.81 3.18
758 771 2.930682 GAGTAGGAATCGCAACTGTTCC 59.069 50.000 0.00 0.00 41.32 3.62
759 772 2.301870 AGTAGGAATCGCAACTGTTCCA 59.698 45.455 6.19 0.00 43.01 3.53
760 773 2.270352 AGGAATCGCAACTGTTCCAA 57.730 45.000 6.19 0.00 43.01 3.53
761 774 2.795329 AGGAATCGCAACTGTTCCAAT 58.205 42.857 6.19 0.00 43.01 3.16
762 775 2.749621 AGGAATCGCAACTGTTCCAATC 59.250 45.455 6.19 0.00 43.01 2.67
763 776 2.749621 GGAATCGCAACTGTTCCAATCT 59.250 45.455 0.00 0.00 40.82 2.40
764 777 3.426695 GGAATCGCAACTGTTCCAATCTG 60.427 47.826 0.00 0.00 40.82 2.90
765 778 2.254546 TCGCAACTGTTCCAATCTGT 57.745 45.000 0.00 0.00 0.00 3.41
766 779 1.872952 TCGCAACTGTTCCAATCTGTG 59.127 47.619 0.00 0.00 0.00 3.66
774 787 4.208632 CCAATCTGTGGCTCCGTC 57.791 61.111 0.00 0.00 41.72 4.79
775 788 1.599047 CCAATCTGTGGCTCCGTCT 59.401 57.895 0.00 0.00 41.72 4.18
776 789 0.824109 CCAATCTGTGGCTCCGTCTA 59.176 55.000 0.00 0.00 41.72 2.59
777 790 1.207089 CCAATCTGTGGCTCCGTCTAA 59.793 52.381 0.00 0.00 41.72 2.10
778 791 2.158900 CCAATCTGTGGCTCCGTCTAAT 60.159 50.000 0.00 0.00 41.72 1.73
779 792 3.535561 CAATCTGTGGCTCCGTCTAATT 58.464 45.455 0.00 0.00 0.00 1.40
780 793 4.442893 CCAATCTGTGGCTCCGTCTAATTA 60.443 45.833 0.00 0.00 41.72 1.40
781 794 3.795623 TCTGTGGCTCCGTCTAATTAC 57.204 47.619 0.00 0.00 0.00 1.89
782 795 2.098607 TCTGTGGCTCCGTCTAATTACG 59.901 50.000 0.00 0.00 42.49 3.18
826 839 4.571372 ATCGTTAAGATCTCCTCGGAAC 57.429 45.455 0.00 0.00 33.45 3.62
855 871 2.000447 GCGGTGTAAACTAGGAAGCTG 59.000 52.381 0.00 0.00 0.00 4.24
859 875 4.443621 GGTGTAAACTAGGAAGCTGATCC 58.556 47.826 0.00 0.00 39.96 3.36
887 903 3.481453 GAGATTGGATTGAACCCTAGCC 58.519 50.000 0.00 0.00 0.00 3.93
891 907 2.119495 TGGATTGAACCCTAGCCTCTC 58.881 52.381 0.00 0.00 0.00 3.20
919 935 2.488545 AGCGACGCCAGTATATAAGAGG 59.511 50.000 17.79 0.00 0.00 3.69
922 938 3.428532 GACGCCAGTATATAAGAGGGGA 58.571 50.000 15.78 0.00 36.31 4.81
923 939 3.163467 ACGCCAGTATATAAGAGGGGAC 58.837 50.000 15.78 0.00 36.31 4.46
931 947 1.968050 ATAAGAGGGGACAACGGCGG 61.968 60.000 13.24 0.00 0.00 6.13
953 969 2.095212 CGCAAGGAGATCGATCGGATTA 60.095 50.000 19.33 0.00 34.82 1.75
954 970 3.428180 CGCAAGGAGATCGATCGGATTAT 60.428 47.826 19.33 0.20 34.82 1.28
955 971 4.109050 GCAAGGAGATCGATCGGATTATC 58.891 47.826 19.33 10.70 34.82 1.75
957 973 5.623368 GCAAGGAGATCGATCGGATTATCTT 60.623 44.000 19.33 12.48 34.82 2.40
958 974 6.404844 GCAAGGAGATCGATCGGATTATCTTA 60.405 42.308 19.33 0.00 34.82 2.10
960 976 7.504924 AGGAGATCGATCGGATTATCTTATC 57.495 40.000 19.33 7.37 34.82 1.75
962 978 8.433599 AGGAGATCGATCGGATTATCTTATCTA 58.566 37.037 19.33 0.00 34.82 1.98
963 979 8.500773 GGAGATCGATCGGATTATCTTATCTAC 58.499 40.741 19.33 9.46 34.82 2.59
964 980 8.385898 AGATCGATCGGATTATCTTATCTACC 57.614 38.462 19.33 0.00 34.82 3.18
966 982 8.754991 ATCGATCGGATTATCTTATCTACCTT 57.245 34.615 16.41 0.00 28.32 3.50
967 983 7.986562 TCGATCGGATTATCTTATCTACCTTG 58.013 38.462 16.41 0.00 0.00 3.61
968 984 6.693545 CGATCGGATTATCTTATCTACCTTGC 59.306 42.308 7.38 0.00 0.00 4.01
969 985 5.950883 TCGGATTATCTTATCTACCTTGCG 58.049 41.667 0.00 0.00 0.00 4.85
971 987 4.563184 GGATTATCTTATCTACCTTGCGCG 59.437 45.833 0.00 0.00 0.00 6.86
972 988 1.784525 ATCTTATCTACCTTGCGCGC 58.215 50.000 27.26 27.26 0.00 6.86
973 989 0.594028 TCTTATCTACCTTGCGCGCG 60.594 55.000 28.44 28.44 0.00 6.86
1240 1270 4.341783 GCCACTGCCACTGGAGCT 62.342 66.667 0.00 0.00 0.00 4.09
1393 1423 0.994995 CCTCTGCTTCGACAATCACG 59.005 55.000 0.00 0.00 0.00 4.35
1399 1429 1.428448 CTTCGACAATCACGCTCCAA 58.572 50.000 0.00 0.00 0.00 3.53
1443 1473 2.357034 CACCTGTACTGCCGCGTT 60.357 61.111 4.92 0.00 0.00 4.84
1445 1475 1.227734 ACCTGTACTGCCGCGTTTT 60.228 52.632 4.92 0.00 0.00 2.43
2043 2076 1.134371 GCCTCCCTTGACAGGTACATC 60.134 57.143 0.00 0.00 38.79 3.06
2046 2079 2.774234 CTCCCTTGACAGGTACATCCAT 59.226 50.000 0.00 0.00 38.79 3.41
2079 2112 1.965930 GGTGGCGCATGAACACTCA 60.966 57.895 10.83 0.00 35.53 3.41
2082 2115 2.202222 GCGCATGAACACTCACGC 60.202 61.111 0.30 0.00 39.10 5.34
2083 2116 2.476051 CGCATGAACACTCACGCC 59.524 61.111 0.00 0.00 37.48 5.68
2084 2117 2.316867 CGCATGAACACTCACGCCA 61.317 57.895 0.00 0.00 37.48 5.69
2211 2244 2.040043 AGGCAGATCCTGGAGGGG 60.040 66.667 1.52 0.00 45.54 4.79
2214 2247 2.444706 CAGATCCTGGAGGGGCGA 60.445 66.667 1.52 0.00 35.41 5.54
2403 2436 1.065926 TCGTCCTACTTCGACAGGCTA 60.066 52.381 2.61 0.00 0.00 3.93
2406 2439 1.103803 CCTACTTCGACAGGCTAGCA 58.896 55.000 18.24 0.00 0.00 3.49
2477 2510 1.134367 CCAAACCGATCTCGACTAGCA 59.866 52.381 0.22 0.00 43.02 3.49
2478 2511 2.416836 CCAAACCGATCTCGACTAGCAA 60.417 50.000 0.22 0.00 43.02 3.91
2504 2574 6.528321 AGGTTCCTGGTTTAACTACAAGTAC 58.472 40.000 0.00 0.00 0.00 2.73
2505 2575 6.100134 AGGTTCCTGGTTTAACTACAAGTACA 59.900 38.462 0.00 0.00 0.00 2.90
2506 2576 6.426025 GGTTCCTGGTTTAACTACAAGTACAG 59.574 42.308 0.00 0.00 0.00 2.74
2507 2577 6.736110 TCCTGGTTTAACTACAAGTACAGT 57.264 37.500 0.00 0.00 0.00 3.55
2508 2578 7.128234 TCCTGGTTTAACTACAAGTACAGTT 57.872 36.000 0.00 0.00 38.50 3.16
2509 2579 6.987992 TCCTGGTTTAACTACAAGTACAGTTG 59.012 38.462 6.58 0.66 35.79 3.16
2510 2580 6.293244 CCTGGTTTAACTACAAGTACAGTTGC 60.293 42.308 6.58 0.00 35.79 4.17
2511 2581 6.350906 TGGTTTAACTACAAGTACAGTTGCT 58.649 36.000 6.58 0.00 35.79 3.91
2512 2582 6.824704 TGGTTTAACTACAAGTACAGTTGCTT 59.175 34.615 6.58 1.93 35.79 3.91
2513 2583 7.337436 TGGTTTAACTACAAGTACAGTTGCTTT 59.663 33.333 6.58 0.00 35.79 3.51
2576 2646 4.274459 CCATTGCCAGATGTAGTAGCTTTC 59.726 45.833 0.00 0.00 0.00 2.62
2592 2662 3.505293 AGCTTTCATCTGAACTCCTTTGC 59.495 43.478 0.00 0.00 33.13 3.68
2616 2687 7.471721 GCTTTTTGCAACTTTTTAGATTTGGT 58.528 30.769 0.00 0.00 42.31 3.67
2617 2688 7.967854 GCTTTTTGCAACTTTTTAGATTTGGTT 59.032 29.630 0.00 0.00 42.31 3.67
2643 2717 7.927629 TCTTTATGTTACTACGGTCAACTGTTT 59.072 33.333 0.00 0.00 36.70 2.83
2644 2718 5.917541 ATGTTACTACGGTCAACTGTTTG 57.082 39.130 0.00 0.00 36.70 2.93
2645 2719 4.757594 TGTTACTACGGTCAACTGTTTGT 58.242 39.130 0.00 3.38 36.70 2.83
2646 2720 4.805192 TGTTACTACGGTCAACTGTTTGTC 59.195 41.667 0.00 0.00 36.70 3.18
2660 2737 1.584761 GTTTGTCAAACGCCGTTTTCC 59.415 47.619 13.32 6.94 33.10 3.13
2675 2752 3.666902 CGTTTTCCGCTAATGTGTCCTTG 60.667 47.826 0.00 0.00 0.00 3.61
2691 2768 2.971330 TCCTTGTTTTGGCCAACATGAT 59.029 40.909 20.35 0.00 36.54 2.45
2698 2775 5.105797 TGTTTTGGCCAACATGATAGATGTC 60.106 40.000 20.35 0.00 31.48 3.06
2699 2776 4.508551 TTGGCCAACATGATAGATGTCT 57.491 40.909 16.05 0.00 0.00 3.41
2718 2795 9.331282 AGATGTCTAGATTAATTGGTTTGCTAC 57.669 33.333 0.00 0.00 0.00 3.58
2754 2831 4.606457 CCAACGTTTGGCAAAATCAAAA 57.394 36.364 15.29 0.00 45.17 2.44
2755 2832 4.586334 CCAACGTTTGGCAAAATCAAAAG 58.414 39.130 15.29 0.00 45.17 2.27
2759 2836 4.693095 ACGTTTGGCAAAATCAAAAGTTGT 59.307 33.333 15.29 0.00 41.46 3.32
2761 2838 5.254842 GTTTGGCAAAATCAAAAGTTGTCG 58.745 37.500 15.29 0.00 36.11 4.35
2806 2883 2.857618 TCGCAACGAAAATTGGTATGC 58.142 42.857 0.00 0.00 31.06 3.14
2823 2900 2.611225 TGCAACCAAAACCAACATCC 57.389 45.000 0.00 0.00 0.00 3.51
2825 2902 1.871822 GCAACCAAAACCAACATCCGG 60.872 52.381 0.00 0.00 0.00 5.14
2827 2904 0.469144 ACCAAAACCAACATCCGGCT 60.469 50.000 0.00 0.00 0.00 5.52
2828 2905 0.038343 CCAAAACCAACATCCGGCTG 60.038 55.000 3.14 3.14 0.00 4.85
2829 2906 0.958091 CAAAACCAACATCCGGCTGA 59.042 50.000 13.24 0.00 0.00 4.26
2830 2907 1.339610 CAAAACCAACATCCGGCTGAA 59.660 47.619 13.24 0.00 0.00 3.02
2831 2908 1.247567 AAACCAACATCCGGCTGAAG 58.752 50.000 13.24 3.58 0.00 3.02
2833 2910 1.675310 CCAACATCCGGCTGAAGCA 60.675 57.895 13.24 0.00 44.36 3.91
2834 2911 1.503542 CAACATCCGGCTGAAGCAC 59.496 57.895 13.24 0.00 44.36 4.40
2835 2912 1.675641 AACATCCGGCTGAAGCACC 60.676 57.895 13.24 0.00 44.36 5.01
2836 2913 2.046023 CATCCGGCTGAAGCACCA 60.046 61.111 0.00 0.00 44.36 4.17
2839 2916 1.630126 ATCCGGCTGAAGCACCATCT 61.630 55.000 4.43 0.00 44.36 2.90
2840 2917 1.377725 CCGGCTGAAGCACCATCTT 60.378 57.895 4.43 0.00 44.36 2.40
2842 2919 0.169672 CGGCTGAAGCACCATCTTTG 59.830 55.000 4.43 0.00 44.36 2.77
2843 2920 0.108945 GGCTGAAGCACCATCTTTGC 60.109 55.000 4.43 0.00 44.36 3.68
2844 2921 0.108945 GCTGAAGCACCATCTTTGCC 60.109 55.000 0.00 0.00 41.18 4.52
2846 2923 0.961019 TGAAGCACCATCTTTGCCAC 59.039 50.000 0.00 0.00 41.18 5.01
2847 2924 1.251251 GAAGCACCATCTTTGCCACT 58.749 50.000 0.00 0.00 41.18 4.00
2848 2925 1.200948 GAAGCACCATCTTTGCCACTC 59.799 52.381 0.00 0.00 41.18 3.51
2850 2927 1.926511 GCACCATCTTTGCCACTCCG 61.927 60.000 0.00 0.00 33.58 4.63
2851 2928 0.321564 CACCATCTTTGCCACTCCGA 60.322 55.000 0.00 0.00 0.00 4.55
2853 2930 1.019673 CCATCTTTGCCACTCCGATG 58.980 55.000 0.00 0.00 33.16 3.84
2855 2932 1.938577 CATCTTTGCCACTCCGATGAG 59.061 52.381 0.00 0.00 44.62 2.90
2856 2933 0.391661 TCTTTGCCACTCCGATGAGC 60.392 55.000 0.00 0.00 42.74 4.26
2857 2934 0.674581 CTTTGCCACTCCGATGAGCA 60.675 55.000 0.00 0.00 42.74 4.26
2858 2935 0.674581 TTTGCCACTCCGATGAGCAG 60.675 55.000 0.00 0.00 42.74 4.24
2859 2936 2.894387 GCCACTCCGATGAGCAGC 60.894 66.667 0.00 0.00 42.74 5.25
2860 2937 2.580815 CCACTCCGATGAGCAGCA 59.419 61.111 0.00 0.00 42.74 4.41
2862 2939 0.390492 CCACTCCGATGAGCAGCATA 59.610 55.000 0.00 0.00 42.74 3.14
2863 2940 1.604947 CCACTCCGATGAGCAGCATAG 60.605 57.143 0.00 0.00 42.74 2.23
2864 2941 0.033228 ACTCCGATGAGCAGCATAGC 59.967 55.000 0.00 0.00 42.74 2.97
2865 2942 0.669932 CTCCGATGAGCAGCATAGCC 60.670 60.000 0.00 0.00 37.34 3.93
2866 2943 2.025969 CCGATGAGCAGCATAGCCG 61.026 63.158 0.00 0.00 37.34 5.52
2867 2944 2.025969 CGATGAGCAGCATAGCCGG 61.026 63.158 0.00 0.00 37.34 6.13
2868 2945 1.368950 GATGAGCAGCATAGCCGGA 59.631 57.895 5.05 0.00 37.34 5.14
2869 2946 0.948141 GATGAGCAGCATAGCCGGAC 60.948 60.000 5.05 0.00 37.34 4.79
2870 2947 1.689243 ATGAGCAGCATAGCCGGACA 61.689 55.000 5.05 0.00 34.82 4.02
2871 2948 1.070445 GAGCAGCATAGCCGGACAT 59.930 57.895 5.05 0.00 34.23 3.06
2872 2949 0.318441 GAGCAGCATAGCCGGACATA 59.682 55.000 5.05 0.00 34.23 2.29
2873 2950 0.319728 AGCAGCATAGCCGGACATAG 59.680 55.000 5.05 0.00 34.23 2.23
2874 2951 0.671781 GCAGCATAGCCGGACATAGG 60.672 60.000 5.05 0.00 0.00 2.57
2875 2952 0.036952 CAGCATAGCCGGACATAGGG 60.037 60.000 5.05 0.00 0.00 3.53
2876 2953 0.178932 AGCATAGCCGGACATAGGGA 60.179 55.000 5.05 0.00 0.00 4.20
2878 2955 1.338200 GCATAGCCGGACATAGGGAAG 60.338 57.143 5.05 0.00 0.00 3.46
2880 2957 2.696526 TAGCCGGACATAGGGAAGAT 57.303 50.000 5.05 0.00 0.00 2.40
2882 2959 3.191888 AGCCGGACATAGGGAAGATAT 57.808 47.619 5.05 0.00 0.00 1.63
2883 2960 2.834549 AGCCGGACATAGGGAAGATATG 59.165 50.000 5.05 0.00 36.81 1.78
2884 2961 2.093447 GCCGGACATAGGGAAGATATGG 60.093 54.545 5.05 0.00 35.37 2.74
2885 2962 2.501723 CCGGACATAGGGAAGATATGGG 59.498 54.545 0.00 0.00 35.37 4.00
2886 2963 2.501723 CGGACATAGGGAAGATATGGGG 59.498 54.545 0.00 0.00 35.37 4.96
2887 2964 3.803340 GGACATAGGGAAGATATGGGGA 58.197 50.000 0.00 0.00 35.37 4.81
2888 2965 4.175962 GGACATAGGGAAGATATGGGGAA 58.824 47.826 0.00 0.00 35.37 3.97
2889 2966 4.601857 GGACATAGGGAAGATATGGGGAAA 59.398 45.833 0.00 0.00 35.37 3.13
2890 2967 5.280727 GGACATAGGGAAGATATGGGGAAAG 60.281 48.000 0.00 0.00 35.37 2.62
2891 2968 5.486332 ACATAGGGAAGATATGGGGAAAGA 58.514 41.667 0.00 0.00 35.37 2.52
2892 2969 5.917087 ACATAGGGAAGATATGGGGAAAGAA 59.083 40.000 0.00 0.00 35.37 2.52
2893 2970 6.568040 ACATAGGGAAGATATGGGGAAAGAAT 59.432 38.462 0.00 0.00 35.37 2.40
2894 2971 7.744068 ACATAGGGAAGATATGGGGAAAGAATA 59.256 37.037 0.00 0.00 35.37 1.75
2895 2972 8.785859 CATAGGGAAGATATGGGGAAAGAATAT 58.214 37.037 0.00 0.00 0.00 1.28
2896 2973 7.037342 AGGGAAGATATGGGGAAAGAATATG 57.963 40.000 0.00 0.00 0.00 1.78
2897 2974 5.654209 GGGAAGATATGGGGAAAGAATATGC 59.346 44.000 0.00 0.00 0.00 3.14
2898 2975 5.654209 GGAAGATATGGGGAAAGAATATGCC 59.346 44.000 0.00 0.00 0.00 4.40
2899 2976 6.474918 AAGATATGGGGAAAGAATATGCCT 57.525 37.500 0.00 0.00 0.00 4.75
2900 2977 6.072199 AGATATGGGGAAAGAATATGCCTC 57.928 41.667 0.00 0.00 0.00 4.70
2901 2978 3.532641 ATGGGGAAAGAATATGCCTCC 57.467 47.619 0.00 0.00 0.00 4.30
2902 2979 1.142870 TGGGGAAAGAATATGCCTCCG 59.857 52.381 0.00 0.00 0.00 4.63
2903 2980 1.545651 GGGGAAAGAATATGCCTCCGG 60.546 57.143 0.00 0.00 0.00 5.14
2904 2981 1.545651 GGGAAAGAATATGCCTCCGGG 60.546 57.143 0.00 0.00 0.00 5.73
2905 2982 1.420138 GGAAAGAATATGCCTCCGGGA 59.580 52.381 0.00 0.00 33.58 5.14
2906 2983 2.495084 GAAAGAATATGCCTCCGGGAC 58.505 52.381 0.00 0.00 33.58 4.46
2907 2984 1.807814 AAGAATATGCCTCCGGGACT 58.192 50.000 0.00 0.00 33.58 3.85
2908 2985 1.343069 AGAATATGCCTCCGGGACTC 58.657 55.000 0.00 0.00 33.58 3.36
2909 2986 0.321996 GAATATGCCTCCGGGACTCC 59.678 60.000 0.00 0.00 33.58 3.85
2919 2996 4.273811 GGGACTCCGTTTTCGTCC 57.726 61.111 0.00 0.00 42.35 4.79
2920 2997 1.368579 GGGACTCCGTTTTCGTCCA 59.631 57.895 9.58 0.00 42.35 4.02
2929 3006 6.834876 ACTCCGTTTTCGTCCAAAATATAAC 58.165 36.000 0.00 0.00 42.35 1.89
2931 3008 6.833839 TCCGTTTTCGTCCAAAATATAACTG 58.166 36.000 0.00 0.00 42.35 3.16
2932 3009 6.427547 TCCGTTTTCGTCCAAAATATAACTGT 59.572 34.615 0.00 0.00 42.35 3.55
2934 3011 7.592164 CCGTTTTCGTCCAAAATATAACTGTTT 59.408 33.333 0.00 0.00 42.35 2.83
2937 3014 8.716619 TTTCGTCCAAAATATAACTGTTTTCG 57.283 30.769 0.00 0.00 0.00 3.46
2938 3015 7.424227 TCGTCCAAAATATAACTGTTTTCGT 57.576 32.000 0.00 0.00 0.00 3.85
2941 3018 7.005857 CGTCCAAAATATAACTGTTTTCGTTCG 59.994 37.037 0.00 0.00 0.00 3.95
2944 3021 7.592164 CCAAAATATAACTGTTTTCGTTCGGTT 59.408 33.333 0.00 0.00 37.07 4.44
2947 3024 3.835378 AACTGTTTTCGTTCGGTTTGT 57.165 38.095 0.00 0.00 30.22 2.83
2949 3026 5.488645 AACTGTTTTCGTTCGGTTTGTAT 57.511 34.783 0.00 0.00 30.22 2.29
2951 3028 4.571580 ACTGTTTTCGTTCGGTTTGTATGA 59.428 37.500 0.00 0.00 0.00 2.15
2954 3031 6.496571 TGTTTTCGTTCGGTTTGTATGAAAT 58.503 32.000 0.00 0.00 34.24 2.17
2955 3032 6.633634 TGTTTTCGTTCGGTTTGTATGAAATC 59.366 34.615 0.00 0.00 34.24 2.17
2956 3033 4.932268 TCGTTCGGTTTGTATGAAATCC 57.068 40.909 0.00 0.00 0.00 3.01
2957 3034 3.368539 TCGTTCGGTTTGTATGAAATCCG 59.631 43.478 0.00 0.00 41.62 4.18
2958 3035 3.123959 CGTTCGGTTTGTATGAAATCCGT 59.876 43.478 9.97 0.00 41.23 4.69
2959 3036 4.644954 GTTCGGTTTGTATGAAATCCGTC 58.355 43.478 9.97 4.21 41.23 4.79
2964 3041 5.391523 CGGTTTGTATGAAATCCGTCATGTT 60.392 40.000 0.00 0.00 38.69 2.71
2965 3042 6.386654 GGTTTGTATGAAATCCGTCATGTTT 58.613 36.000 0.00 0.00 38.69 2.83
2967 3044 8.188139 GGTTTGTATGAAATCCGTCATGTTTAT 58.812 33.333 0.00 0.00 38.69 1.40
2977 3054 6.779115 TCCGTCATGTTTATATGAAATCCG 57.221 37.500 0.00 0.00 38.69 4.18
2978 3055 5.699001 TCCGTCATGTTTATATGAAATCCGG 59.301 40.000 0.00 0.00 41.00 5.14
2980 3057 5.616866 CGTCATGTTTATATGAAATCCGGCC 60.617 44.000 0.00 0.00 38.69 6.13
2981 3058 4.454161 TCATGTTTATATGAAATCCGGCCG 59.546 41.667 21.04 21.04 34.32 6.13
2982 3059 4.074627 TGTTTATATGAAATCCGGCCGA 57.925 40.909 30.73 13.82 0.00 5.54
2984 3061 5.067273 TGTTTATATGAAATCCGGCCGAAT 58.933 37.500 30.73 9.95 0.00 3.34
2985 3062 5.533154 TGTTTATATGAAATCCGGCCGAATT 59.467 36.000 30.73 17.72 0.00 2.17
2986 3063 6.039941 TGTTTATATGAAATCCGGCCGAATTT 59.960 34.615 30.73 26.77 0.00 1.82
2988 3065 3.982576 ATGAAATCCGGCCGAATTTAC 57.017 42.857 30.73 18.21 0.00 2.01
2989 3066 2.712709 TGAAATCCGGCCGAATTTACA 58.287 42.857 30.73 20.55 0.00 2.41
2990 3067 3.283751 TGAAATCCGGCCGAATTTACAT 58.716 40.909 30.73 1.58 0.00 2.29
2991 3068 3.066064 TGAAATCCGGCCGAATTTACATG 59.934 43.478 30.73 6.27 0.00 3.21
2994 3071 2.925724 TCCGGCCGAATTTACATGAAT 58.074 42.857 30.73 0.00 0.00 2.57
2995 3072 3.283751 TCCGGCCGAATTTACATGAATT 58.716 40.909 30.73 0.00 32.16 2.17
2996 3073 3.697045 TCCGGCCGAATTTACATGAATTT 59.303 39.130 30.73 0.00 29.75 1.82
2998 3075 4.439426 CCGGCCGAATTTACATGAATTTCA 60.439 41.667 30.73 0.75 30.84 2.69
2999 3076 5.280945 CGGCCGAATTTACATGAATTTCAT 58.719 37.500 24.07 6.06 37.65 2.57
3002 3079 8.233868 CGGCCGAATTTACATGAATTTCATATA 58.766 33.333 24.07 2.44 34.28 0.86
3026 3103 9.883142 ATATGGTTTGTTGAAAAAGAGTTTGAA 57.117 25.926 0.00 0.00 0.00 2.69
3027 3104 8.614469 ATGGTTTGTTGAAAAAGAGTTTGAAA 57.386 26.923 0.00 0.00 0.00 2.69
3028 3105 8.614469 TGGTTTGTTGAAAAAGAGTTTGAAAT 57.386 26.923 0.00 0.00 0.00 2.17
3029 3106 8.502387 TGGTTTGTTGAAAAAGAGTTTGAAATG 58.498 29.630 0.00 0.00 0.00 2.32
3034 3111 8.816144 TGTTGAAAAAGAGTTTGAAATGTATGC 58.184 29.630 0.00 0.00 0.00 3.14
3035 3112 8.816144 GTTGAAAAAGAGTTTGAAATGTATGCA 58.184 29.630 0.00 0.00 0.00 3.96
3036 3113 8.578308 TGAAAAAGAGTTTGAAATGTATGCAG 57.422 30.769 0.00 0.00 0.00 4.41
3037 3114 7.169645 TGAAAAAGAGTTTGAAATGTATGCAGC 59.830 33.333 0.00 0.00 0.00 5.25
3038 3115 5.972107 AAGAGTTTGAAATGTATGCAGCT 57.028 34.783 0.00 0.00 0.00 4.24
3039 3116 7.452880 AAAGAGTTTGAAATGTATGCAGCTA 57.547 32.000 0.00 0.00 0.00 3.32
3041 3118 5.065731 AGAGTTTGAAATGTATGCAGCTAGC 59.934 40.000 6.62 6.62 45.96 3.42
3050 3127 4.598257 GCAGCTAGCGTTGAAGGA 57.402 55.556 9.55 0.00 0.00 3.36
3051 3128 2.082354 GCAGCTAGCGTTGAAGGAC 58.918 57.895 9.55 0.00 0.00 3.85
3052 3129 1.687494 GCAGCTAGCGTTGAAGGACG 61.687 60.000 9.55 0.00 45.40 4.79
3053 3130 1.078759 CAGCTAGCGTTGAAGGACGG 61.079 60.000 9.55 0.00 42.98 4.79
3054 3131 2.453638 GCTAGCGTTGAAGGACGGC 61.454 63.158 0.00 0.00 42.98 5.68
3058 3135 2.657237 CGTTGAAGGACGGCCTCT 59.343 61.111 12.33 0.00 46.28 3.69
3059 3136 1.446272 CGTTGAAGGACGGCCTCTC 60.446 63.158 12.33 11.68 46.28 3.20
3060 3137 1.446272 GTTGAAGGACGGCCTCTCG 60.446 63.158 12.33 0.00 46.28 4.04
3061 3138 3.296709 TTGAAGGACGGCCTCTCGC 62.297 63.158 12.33 0.43 46.28 5.03
3062 3139 3.760035 GAAGGACGGCCTCTCGCA 61.760 66.667 12.33 0.00 46.28 5.10
3063 3140 3.077556 AAGGACGGCCTCTCGCAT 61.078 61.111 12.33 0.00 46.28 4.73
3064 3141 2.962697 GAAGGACGGCCTCTCGCATC 62.963 65.000 12.33 0.00 46.28 3.91
3066 3143 2.279120 GACGGCCTCTCGCATCTG 60.279 66.667 0.00 0.00 40.31 2.90
3067 3144 3.069980 GACGGCCTCTCGCATCTGT 62.070 63.158 0.00 0.00 40.31 3.41
3069 3146 1.109920 ACGGCCTCTCGCATCTGTAT 61.110 55.000 0.00 0.00 40.31 2.29
3070 3147 0.387878 CGGCCTCTCGCATCTGTATC 60.388 60.000 0.00 0.00 40.31 2.24
3072 3149 1.336702 GGCCTCTCGCATCTGTATCTG 60.337 57.143 0.00 0.00 40.31 2.90
3074 3151 2.861750 GCCTCTCGCATCTGTATCTGTG 60.862 54.545 0.00 0.00 37.47 3.66
3075 3152 2.288091 CCTCTCGCATCTGTATCTGTGG 60.288 54.545 0.00 0.00 0.00 4.17
3076 3153 2.620585 CTCTCGCATCTGTATCTGTGGA 59.379 50.000 0.00 0.00 0.00 4.02
3078 3155 2.360483 CTCGCATCTGTATCTGTGGACT 59.640 50.000 0.00 0.00 0.00 3.85
3079 3156 2.099756 TCGCATCTGTATCTGTGGACTG 59.900 50.000 0.00 0.00 0.00 3.51
3081 3158 2.169352 GCATCTGTATCTGTGGACTGGT 59.831 50.000 0.00 0.00 0.00 4.00
3082 3159 3.739519 GCATCTGTATCTGTGGACTGGTC 60.740 52.174 0.00 0.00 0.00 4.02
3094 3171 2.032071 CTGGTCCAACCGGTCCAC 59.968 66.667 8.04 4.58 44.49 4.02
3095 3172 3.876589 CTGGTCCAACCGGTCCACG 62.877 68.421 8.04 1.41 44.49 4.94
3112 3189 2.582436 GGACGGATGCGGGAGAAA 59.418 61.111 12.44 0.00 0.00 2.52
3113 3190 1.078708 GGACGGATGCGGGAGAAAA 60.079 57.895 12.44 0.00 0.00 2.29
3115 3192 1.379527 GACGGATGCGGGAGAAAATT 58.620 50.000 12.44 0.00 0.00 1.82
3117 3194 1.472480 ACGGATGCGGGAGAAAATTTG 59.528 47.619 12.44 0.00 0.00 2.32
3118 3195 1.798813 CGGATGCGGGAGAAAATTTGC 60.799 52.381 0.00 0.00 0.00 3.68
3119 3196 1.548986 GATGCGGGAGAAAATTTGCG 58.451 50.000 0.00 0.00 0.00 4.85
3120 3197 0.173255 ATGCGGGAGAAAATTTGCGG 59.827 50.000 0.00 0.00 0.00 5.69
3122 3199 0.455815 GCGGGAGAAAATTTGCGGAT 59.544 50.000 0.00 0.00 0.00 4.18
3123 3200 1.135112 GCGGGAGAAAATTTGCGGATT 60.135 47.619 0.00 0.00 0.00 3.01
3126 3203 3.511699 GGGAGAAAATTTGCGGATTGTC 58.488 45.455 0.00 0.00 0.00 3.18
3127 3204 3.171277 GGAGAAAATTTGCGGATTGTCG 58.829 45.455 0.00 0.00 30.17 4.35
3130 3207 3.980775 AGAAAATTTGCGGATTGTCGTTG 59.019 39.130 0.00 0.00 30.17 4.10
3131 3208 2.346099 AATTTGCGGATTGTCGTTGG 57.654 45.000 0.00 0.00 0.00 3.77
3132 3209 1.529226 ATTTGCGGATTGTCGTTGGA 58.471 45.000 0.00 0.00 0.00 3.53
3136 3213 0.652592 GCGGATTGTCGTTGGAGATG 59.347 55.000 0.00 0.00 0.00 2.90
3137 3214 0.652592 CGGATTGTCGTTGGAGATGC 59.347 55.000 0.00 0.00 0.00 3.91
3138 3215 1.017387 GGATTGTCGTTGGAGATGCC 58.983 55.000 0.00 0.00 37.10 4.40
3139 3216 1.017387 GATTGTCGTTGGAGATGCCC 58.983 55.000 0.00 0.00 34.97 5.36
3140 3217 0.620556 ATTGTCGTTGGAGATGCCCT 59.379 50.000 0.00 0.00 34.97 5.19
3141 3218 1.271856 TTGTCGTTGGAGATGCCCTA 58.728 50.000 0.00 0.00 34.97 3.53
3143 3220 1.626321 TGTCGTTGGAGATGCCCTAAA 59.374 47.619 0.00 0.00 34.97 1.85
3144 3221 2.007608 GTCGTTGGAGATGCCCTAAAC 58.992 52.381 0.00 0.00 34.97 2.01
3145 3222 1.006832 CGTTGGAGATGCCCTAAACG 58.993 55.000 8.30 8.30 38.12 3.60
3146 3223 0.733150 GTTGGAGATGCCCTAAACGC 59.267 55.000 0.00 0.00 34.97 4.84
3147 3224 0.618458 TTGGAGATGCCCTAAACGCT 59.382 50.000 0.00 0.00 34.97 5.07
3148 3225 1.491668 TGGAGATGCCCTAAACGCTA 58.508 50.000 0.00 0.00 34.97 4.26
3149 3226 1.138266 TGGAGATGCCCTAAACGCTAC 59.862 52.381 0.00 0.00 34.97 3.58
3150 3227 1.413077 GGAGATGCCCTAAACGCTACT 59.587 52.381 0.00 0.00 0.00 2.57
3151 3228 2.158943 GGAGATGCCCTAAACGCTACTT 60.159 50.000 0.00 0.00 0.00 2.24
3152 3229 3.532542 GAGATGCCCTAAACGCTACTTT 58.467 45.455 0.00 0.00 0.00 2.66
3153 3230 3.939592 GAGATGCCCTAAACGCTACTTTT 59.060 43.478 0.00 0.00 0.00 2.27
3156 3233 6.823497 AGATGCCCTAAACGCTACTTTTATA 58.177 36.000 0.00 0.00 0.00 0.98
3157 3234 7.277396 AGATGCCCTAAACGCTACTTTTATAA 58.723 34.615 0.00 0.00 0.00 0.98
3158 3235 7.771826 AGATGCCCTAAACGCTACTTTTATAAA 59.228 33.333 0.00 0.00 0.00 1.40
3159 3236 7.868906 TGCCCTAAACGCTACTTTTATAAAT 57.131 32.000 0.00 0.00 0.00 1.40
3160 3237 7.922837 TGCCCTAAACGCTACTTTTATAAATC 58.077 34.615 0.00 0.00 0.00 2.17
3161 3238 7.771826 TGCCCTAAACGCTACTTTTATAAATCT 59.228 33.333 0.00 0.00 0.00 2.40
3190 3303 9.618890 AAATTTGCTATCTTGCTATTGTCTCTA 57.381 29.630 0.00 0.00 0.00 2.43
3194 3307 8.824159 TGCTATCTTGCTATTGTCTCTATTTC 57.176 34.615 0.00 0.00 0.00 2.17
3205 3318 5.462530 TGTCTCTATTTCGTCCAAACTCA 57.537 39.130 0.00 0.00 0.00 3.41
3212 3325 3.678056 TTCGTCCAAACTCAGTATGCT 57.322 42.857 0.00 0.00 34.76 3.79
3236 3349 2.224992 TGTTGCTGATTCAAAGGCCCTA 60.225 45.455 0.00 0.00 0.00 3.53
3242 3355 3.944015 CTGATTCAAAGGCCCTAACTCTG 59.056 47.826 0.00 0.00 0.00 3.35
3243 3356 2.200373 TTCAAAGGCCCTAACTCTGC 57.800 50.000 0.00 0.00 0.00 4.26
3252 3365 1.591703 CTAACTCTGCCGCTGGTCA 59.408 57.895 0.00 0.00 0.00 4.02
3256 3369 3.978723 CTCTGCCGCTGGTCACTCG 62.979 68.421 0.00 0.00 0.00 4.18
3260 3373 2.338620 CCGCTGGTCACTCGTTGA 59.661 61.111 0.00 0.00 0.00 3.18
3274 3387 8.234546 GGTCACTCGTTGATAATGTTATTGTTT 58.765 33.333 0.00 0.00 36.32 2.83
3328 3443 7.352079 AGATCAAGTTCTCCATTGTGTTTTT 57.648 32.000 0.00 0.00 0.00 1.94
3334 3449 9.311916 CAAGTTCTCCATTGTGTTTTTCATTTA 57.688 29.630 0.00 0.00 0.00 1.40
3356 3471 4.078537 AGTTTGGCATGCTGTATAACACA 58.921 39.130 18.92 0.00 35.30 3.72
3358 3473 2.364632 TGGCATGCTGTATAACACACC 58.635 47.619 18.92 0.00 32.33 4.16
3359 3474 2.290577 TGGCATGCTGTATAACACACCA 60.291 45.455 18.92 0.00 32.33 4.17
3360 3475 2.097466 GGCATGCTGTATAACACACCAC 59.903 50.000 18.92 0.00 32.33 4.16
3361 3476 2.223021 GCATGCTGTATAACACACCACG 60.223 50.000 11.37 0.00 32.33 4.94
3362 3477 2.823924 TGCTGTATAACACACCACGT 57.176 45.000 0.00 0.00 32.33 4.49
3363 3478 2.679450 TGCTGTATAACACACCACGTC 58.321 47.619 0.00 0.00 32.33 4.34
3364 3479 2.036089 TGCTGTATAACACACCACGTCA 59.964 45.455 0.00 0.00 32.33 4.35
3365 3480 2.666508 GCTGTATAACACACCACGTCAG 59.333 50.000 0.00 0.00 32.33 3.51
3366 3481 3.613193 GCTGTATAACACACCACGTCAGA 60.613 47.826 0.00 0.00 32.33 3.27
3367 3482 4.166523 CTGTATAACACACCACGTCAGAG 58.833 47.826 0.00 0.00 32.33 3.35
3368 3483 3.822167 TGTATAACACACCACGTCAGAGA 59.178 43.478 0.00 0.00 30.04 3.10
3369 3484 4.461431 TGTATAACACACCACGTCAGAGAT 59.539 41.667 0.00 0.00 30.04 2.75
3370 3485 2.910688 AACACACCACGTCAGAGATT 57.089 45.000 0.00 0.00 0.00 2.40
3371 3486 2.910688 ACACACCACGTCAGAGATTT 57.089 45.000 0.00 0.00 0.00 2.17
3383 3498 5.046591 ACGTCAGAGATTTGTATCCAAAGGA 60.047 40.000 0.00 0.00 43.45 3.36
3399 3514 6.122277 TCCAAAGGATCCAATTGCTAGTAAG 58.878 40.000 15.82 4.66 0.00 2.34
3435 3550 4.854173 TGCATGGTATGTACATTCAAGGT 58.146 39.130 14.77 0.00 0.00 3.50
3438 3553 6.035843 GCATGGTATGTACATTCAAGGTTTG 58.964 40.000 14.77 8.80 0.00 2.93
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
181 186 6.192682 CGTGATACATGCACTTAAAATTGTCG 59.807 38.462 0.00 0.00 34.18 4.35
205 210 4.489810 TGCACCATAAACTAAAATTGCCG 58.510 39.130 0.00 0.00 0.00 5.69
354 361 6.670077 TTTTTGTTAAAAGTTGCCATGTCC 57.330 33.333 0.00 0.00 0.00 4.02
438 450 4.455877 AGATTGAAGATCCGTTTTCACCAC 59.544 41.667 0.00 0.00 33.36 4.16
504 517 5.106442 GCATGCATGTGATGATCTTTTTGA 58.894 37.500 26.79 0.00 0.00 2.69
673 686 9.671279 TCGTATACTATACCCAATCGATTTCTA 57.329 33.333 8.21 0.00 0.00 2.10
674 687 8.571461 TCGTATACTATACCCAATCGATTTCT 57.429 34.615 8.21 0.00 0.00 2.52
675 688 9.448294 GATCGTATACTATACCCAATCGATTTC 57.552 37.037 8.21 0.00 36.04 2.17
676 689 8.127327 CGATCGTATACTATACCCAATCGATTT 58.873 37.037 8.21 0.00 36.50 2.17
677 690 7.496920 TCGATCGTATACTATACCCAATCGATT 59.503 37.037 15.94 4.39 37.97 3.34
678 691 6.988580 TCGATCGTATACTATACCCAATCGAT 59.011 38.462 15.94 11.27 37.97 3.59
679 692 6.340522 TCGATCGTATACTATACCCAATCGA 58.659 40.000 15.94 19.71 39.84 3.59
680 693 6.257411 ACTCGATCGTATACTATACCCAATCG 59.743 42.308 15.94 17.39 35.92 3.34
681 694 7.551035 ACTCGATCGTATACTATACCCAATC 57.449 40.000 15.94 2.39 0.00 2.67
682 695 7.066766 GGAACTCGATCGTATACTATACCCAAT 59.933 40.741 15.94 0.00 0.00 3.16
683 696 6.372659 GGAACTCGATCGTATACTATACCCAA 59.627 42.308 15.94 0.00 0.00 4.12
684 697 5.877012 GGAACTCGATCGTATACTATACCCA 59.123 44.000 15.94 0.00 0.00 4.51
685 698 5.295540 GGGAACTCGATCGTATACTATACCC 59.704 48.000 15.94 12.11 0.00 3.69
686 699 5.295540 GGGGAACTCGATCGTATACTATACC 59.704 48.000 15.94 5.85 0.00 2.73
687 700 5.006165 CGGGGAACTCGATCGTATACTATAC 59.994 48.000 15.94 0.00 0.00 1.47
688 701 5.111989 CGGGGAACTCGATCGTATACTATA 58.888 45.833 15.94 0.00 0.00 1.31
689 702 3.937706 CGGGGAACTCGATCGTATACTAT 59.062 47.826 15.94 0.00 0.00 2.12
690 703 3.329386 CGGGGAACTCGATCGTATACTA 58.671 50.000 15.94 0.00 0.00 1.82
691 704 2.149578 CGGGGAACTCGATCGTATACT 58.850 52.381 15.94 0.00 0.00 2.12
692 705 1.400759 GCGGGGAACTCGATCGTATAC 60.401 57.143 15.94 3.17 0.00 1.47
693 706 0.877071 GCGGGGAACTCGATCGTATA 59.123 55.000 15.94 0.00 0.00 1.47
694 707 1.658673 GCGGGGAACTCGATCGTAT 59.341 57.895 15.94 1.13 0.00 3.06
695 708 2.827051 CGCGGGGAACTCGATCGTA 61.827 63.158 15.94 0.90 0.00 3.43
696 709 4.189188 CGCGGGGAACTCGATCGT 62.189 66.667 15.94 0.00 0.00 3.73
697 710 2.877360 TTTCGCGGGGAACTCGATCG 62.877 60.000 9.36 9.36 35.84 3.69
698 711 0.738412 TTTTCGCGGGGAACTCGATC 60.738 55.000 6.13 0.00 35.84 3.69
699 712 0.320946 TTTTTCGCGGGGAACTCGAT 60.321 50.000 6.13 0.00 35.84 3.59
700 713 0.947180 CTTTTTCGCGGGGAACTCGA 60.947 55.000 6.13 0.00 33.42 4.04
701 714 0.947180 TCTTTTTCGCGGGGAACTCG 60.947 55.000 6.13 0.00 33.42 4.18
702 715 1.232119 TTCTTTTTCGCGGGGAACTC 58.768 50.000 6.13 0.00 33.42 3.01
703 716 1.682740 TTTCTTTTTCGCGGGGAACT 58.317 45.000 6.13 0.00 33.42 3.01
704 717 2.495409 TTTTCTTTTTCGCGGGGAAC 57.505 45.000 6.13 0.00 33.42 3.62
705 718 2.688958 TCTTTTTCTTTTTCGCGGGGAA 59.311 40.909 6.13 3.07 0.00 3.97
706 719 2.299521 TCTTTTTCTTTTTCGCGGGGA 58.700 42.857 6.13 0.00 0.00 4.81
707 720 2.785713 TCTTTTTCTTTTTCGCGGGG 57.214 45.000 6.13 0.00 0.00 5.73
708 721 3.360758 CGAATCTTTTTCTTTTTCGCGGG 59.639 43.478 6.13 0.00 33.70 6.13
709 722 3.360758 CCGAATCTTTTTCTTTTTCGCGG 59.639 43.478 6.13 0.00 38.21 6.46
710 723 3.972502 ACCGAATCTTTTTCTTTTTCGCG 59.027 39.130 0.00 0.00 38.21 5.87
711 724 7.045804 CGTATACCGAATCTTTTTCTTTTTCGC 60.046 37.037 0.00 0.00 38.21 4.70
712 725 8.164153 TCGTATACCGAATCTTTTTCTTTTTCG 58.836 33.333 0.00 0.00 44.03 3.46
713 726 9.474249 CTCGTATACCGAATCTTTTTCTTTTTC 57.526 33.333 0.00 0.00 46.75 2.29
714 727 8.996271 ACTCGTATACCGAATCTTTTTCTTTTT 58.004 29.630 0.00 0.00 46.75 1.94
715 728 8.543862 ACTCGTATACCGAATCTTTTTCTTTT 57.456 30.769 0.00 0.00 46.75 2.27
716 729 9.298774 CTACTCGTATACCGAATCTTTTTCTTT 57.701 33.333 0.00 0.00 46.75 2.52
717 730 7.919621 CCTACTCGTATACCGAATCTTTTTCTT 59.080 37.037 0.00 0.00 46.75 2.52
718 731 7.284034 TCCTACTCGTATACCGAATCTTTTTCT 59.716 37.037 0.00 0.00 46.75 2.52
719 732 7.420800 TCCTACTCGTATACCGAATCTTTTTC 58.579 38.462 0.00 0.00 46.75 2.29
720 733 7.338800 TCCTACTCGTATACCGAATCTTTTT 57.661 36.000 0.00 0.00 46.75 1.94
721 734 6.949352 TCCTACTCGTATACCGAATCTTTT 57.051 37.500 0.00 0.00 46.75 2.27
722 735 6.949352 TTCCTACTCGTATACCGAATCTTT 57.051 37.500 0.00 0.00 46.75 2.52
723 736 6.128336 CGATTCCTACTCGTATACCGAATCTT 60.128 42.308 0.00 0.00 46.75 2.40
724 737 5.350914 CGATTCCTACTCGTATACCGAATCT 59.649 44.000 0.00 0.00 46.75 2.40
725 738 5.558307 CGATTCCTACTCGTATACCGAATC 58.442 45.833 0.00 0.00 46.75 2.52
726 739 4.142730 GCGATTCCTACTCGTATACCGAAT 60.143 45.833 0.00 0.00 46.75 3.34
727 740 3.187227 GCGATTCCTACTCGTATACCGAA 59.813 47.826 0.00 0.00 46.75 4.30
728 741 2.738846 GCGATTCCTACTCGTATACCGA 59.261 50.000 0.00 0.00 45.00 4.69
729 742 2.481568 TGCGATTCCTACTCGTATACCG 59.518 50.000 0.00 0.00 38.37 4.02
730 743 4.023365 AGTTGCGATTCCTACTCGTATACC 60.023 45.833 0.00 0.00 38.37 2.73
731 744 4.910456 CAGTTGCGATTCCTACTCGTATAC 59.090 45.833 0.00 0.00 38.37 1.47
732 745 4.577693 ACAGTTGCGATTCCTACTCGTATA 59.422 41.667 0.00 0.00 38.37 1.47
733 746 3.380637 ACAGTTGCGATTCCTACTCGTAT 59.619 43.478 0.00 0.00 38.37 3.06
734 747 2.751259 ACAGTTGCGATTCCTACTCGTA 59.249 45.455 0.00 0.00 38.37 3.43
735 748 1.544691 ACAGTTGCGATTCCTACTCGT 59.455 47.619 0.00 0.00 38.37 4.18
736 749 2.279582 ACAGTTGCGATTCCTACTCG 57.720 50.000 0.00 0.00 39.11 4.18
737 750 2.930682 GGAACAGTTGCGATTCCTACTC 59.069 50.000 0.00 0.00 39.11 2.59
738 751 2.301870 TGGAACAGTTGCGATTCCTACT 59.698 45.455 6.41 0.00 42.13 2.57
739 752 2.695359 TGGAACAGTTGCGATTCCTAC 58.305 47.619 6.41 0.00 42.13 3.18
740 753 3.410631 TTGGAACAGTTGCGATTCCTA 57.589 42.857 6.41 0.00 42.13 2.94
741 754 2.270352 TTGGAACAGTTGCGATTCCT 57.730 45.000 6.41 0.00 42.13 3.36
742 755 2.749621 AGATTGGAACAGTTGCGATTCC 59.250 45.455 8.84 0.00 42.39 3.01
743 756 3.189287 ACAGATTGGAACAGTTGCGATTC 59.811 43.478 8.84 1.90 42.39 2.52
744 757 3.058016 CACAGATTGGAACAGTTGCGATT 60.058 43.478 8.84 0.00 42.39 3.34
745 758 2.485426 CACAGATTGGAACAGTTGCGAT 59.515 45.455 7.24 7.24 42.39 4.58
746 759 1.872952 CACAGATTGGAACAGTTGCGA 59.127 47.619 0.00 0.00 42.39 5.10
747 760 2.320805 CACAGATTGGAACAGTTGCG 57.679 50.000 0.00 0.00 42.39 4.85
758 771 2.672961 TTAGACGGAGCCACAGATTG 57.327 50.000 0.00 0.00 0.00 2.67
759 772 3.914426 AATTAGACGGAGCCACAGATT 57.086 42.857 0.00 0.00 0.00 2.40
760 773 3.243434 CGTAATTAGACGGAGCCACAGAT 60.243 47.826 0.00 0.00 39.19 2.90
761 774 2.098607 CGTAATTAGACGGAGCCACAGA 59.901 50.000 0.00 0.00 39.19 3.41
762 775 2.460918 CGTAATTAGACGGAGCCACAG 58.539 52.381 0.00 0.00 39.19 3.66
763 776 2.572191 CGTAATTAGACGGAGCCACA 57.428 50.000 0.00 0.00 39.19 4.17
771 784 4.274865 GTCTTCCGTACCGTAATTAGACG 58.725 47.826 0.00 0.00 42.55 4.18
772 785 4.034048 TCGTCTTCCGTACCGTAATTAGAC 59.966 45.833 0.00 0.00 37.94 2.59
773 786 4.188462 TCGTCTTCCGTACCGTAATTAGA 58.812 43.478 0.00 0.00 37.94 2.10
774 787 4.271049 TCTCGTCTTCCGTACCGTAATTAG 59.729 45.833 0.00 0.00 37.94 1.73
775 788 4.188462 TCTCGTCTTCCGTACCGTAATTA 58.812 43.478 0.00 0.00 37.94 1.40
776 789 3.009723 TCTCGTCTTCCGTACCGTAATT 58.990 45.455 0.00 0.00 37.94 1.40
777 790 2.611292 CTCTCGTCTTCCGTACCGTAAT 59.389 50.000 0.00 0.00 37.94 1.89
778 791 2.002586 CTCTCGTCTTCCGTACCGTAA 58.997 52.381 0.00 0.00 37.94 3.18
779 792 1.645034 CTCTCGTCTTCCGTACCGTA 58.355 55.000 0.00 0.00 37.94 4.02
780 793 1.023513 CCTCTCGTCTTCCGTACCGT 61.024 60.000 0.00 0.00 37.94 4.83
781 794 1.023513 ACCTCTCGTCTTCCGTACCG 61.024 60.000 0.00 0.00 37.94 4.02
782 795 1.135460 CAACCTCTCGTCTTCCGTACC 60.135 57.143 0.00 0.00 37.94 3.34
783 796 1.808945 TCAACCTCTCGTCTTCCGTAC 59.191 52.381 0.00 0.00 37.94 3.67
784 797 2.082231 CTCAACCTCTCGTCTTCCGTA 58.918 52.381 0.00 0.00 37.94 4.02
785 798 0.882474 CTCAACCTCTCGTCTTCCGT 59.118 55.000 0.00 0.00 37.94 4.69
786 799 1.166129 TCTCAACCTCTCGTCTTCCG 58.834 55.000 0.00 0.00 38.13 4.30
821 834 1.597027 ACCGCAGTTTCCTGTTCCG 60.597 57.895 0.00 0.00 41.02 4.30
826 839 2.218603 AGTTTACACCGCAGTTTCCTG 58.781 47.619 0.00 0.00 41.91 3.86
840 856 4.443621 GTGGGATCAGCTTCCTAGTTTAC 58.556 47.826 4.45 0.00 35.97 2.01
855 871 1.414158 TCCAATCTCCTCGTGGGATC 58.586 55.000 3.23 0.00 44.15 3.36
859 875 2.939103 GTTCAATCCAATCTCCTCGTGG 59.061 50.000 0.00 0.00 0.00 4.94
887 903 4.180946 CGTCGCTCCACCCGAGAG 62.181 72.222 0.00 0.00 41.63 3.20
895 911 1.900245 TATATACTGGCGTCGCTCCA 58.100 50.000 18.11 6.59 0.00 3.86
931 947 2.018866 CCGATCGATCTCCTTGCGC 61.019 63.158 22.43 0.00 0.00 6.09
934 950 5.574891 AGATAATCCGATCGATCTCCTTG 57.425 43.478 22.43 7.02 0.00 3.61
935 951 7.777910 AGATAAGATAATCCGATCGATCTCCTT 59.222 37.037 22.43 13.81 32.39 3.36
936 952 7.287061 AGATAAGATAATCCGATCGATCTCCT 58.713 38.462 22.43 11.20 32.39 3.69
937 953 7.504924 AGATAAGATAATCCGATCGATCTCC 57.495 40.000 22.43 9.36 32.39 3.71
938 954 8.500773 GGTAGATAAGATAATCCGATCGATCTC 58.499 40.741 22.43 12.16 36.08 2.75
939 955 8.215050 AGGTAGATAAGATAATCCGATCGATCT 58.785 37.037 22.43 13.72 37.28 2.75
940 956 8.385898 AGGTAGATAAGATAATCCGATCGATC 57.614 38.462 18.66 15.68 0.00 3.69
941 957 8.625651 CAAGGTAGATAAGATAATCCGATCGAT 58.374 37.037 18.66 0.00 0.00 3.59
942 958 7.415318 GCAAGGTAGATAAGATAATCCGATCGA 60.415 40.741 18.66 2.91 0.00 3.59
943 959 6.693545 GCAAGGTAGATAAGATAATCCGATCG 59.306 42.308 8.51 8.51 0.00 3.69
953 969 1.784525 GCGCGCAAGGTAGATAAGAT 58.215 50.000 29.10 0.00 38.28 2.40
954 970 0.594028 CGCGCGCAAGGTAGATAAGA 60.594 55.000 32.61 0.00 38.28 2.10
955 971 1.846648 CGCGCGCAAGGTAGATAAG 59.153 57.895 32.61 5.79 38.28 1.73
957 973 2.657296 GCGCGCGCAAGGTAGATA 60.657 61.111 46.11 0.00 41.49 1.98
971 987 2.577911 GGACCTACGTACGTGCGC 60.578 66.667 30.25 15.87 34.88 6.09
972 988 0.795735 CTTGGACCTACGTACGTGCG 60.796 60.000 30.25 24.57 37.94 5.34
973 989 0.523072 TCTTGGACCTACGTACGTGC 59.477 55.000 30.25 15.88 0.00 5.34
975 991 2.019984 GGATCTTGGACCTACGTACGT 58.980 52.381 25.98 25.98 0.00 3.57
1240 1270 2.283676 GTCCTGGACCACGAGGGA 60.284 66.667 16.14 0.00 41.40 4.20
1393 1423 1.377536 GACTTCATCTGGCTTGGAGC 58.622 55.000 0.00 0.00 41.46 4.70
1399 1429 2.185350 CGCCGACTTCATCTGGCT 59.815 61.111 0.21 0.00 41.83 4.75
1443 1473 0.460635 GTATGTACCCGCGCCAGAAA 60.461 55.000 0.00 0.00 0.00 2.52
1445 1475 2.809706 GTATGTACCCGCGCCAGA 59.190 61.111 0.00 0.00 0.00 3.86
1534 1564 2.687566 GTCCACCAGGTCCCGGAT 60.688 66.667 0.73 0.00 35.89 4.18
1836 1869 1.963338 GCAGAGCTTCGTGTTGGCT 60.963 57.895 0.00 0.00 39.16 4.75
2031 2064 5.195185 TCGTAGTAATGGATGTACCTGTCA 58.805 41.667 0.00 0.00 39.86 3.58
2043 2076 0.597637 CCCAGCGCTCGTAGTAATGG 60.598 60.000 7.13 2.63 0.00 3.16
2046 2079 1.509463 CACCCAGCGCTCGTAGTAA 59.491 57.895 7.13 0.00 0.00 2.24
2070 2103 1.367471 CCTCTGGCGTGAGTGTTCA 59.633 57.895 6.58 0.00 32.50 3.18
2083 2116 4.154347 GTCCTCGCTGGCCCTCTG 62.154 72.222 0.00 0.00 35.26 3.35
2084 2117 3.991924 ATGTCCTCGCTGGCCCTCT 62.992 63.158 0.00 0.00 35.26 3.69
2175 2208 0.454600 TGTAGGCGTCGATGAGGAAC 59.545 55.000 9.31 1.07 0.00 3.62
2211 2244 2.887568 CACCTCAGCATCCGTCGC 60.888 66.667 0.00 0.00 0.00 5.19
2214 2247 2.660064 GGTCCACCTCAGCATCCGT 61.660 63.158 0.00 0.00 0.00 4.69
2403 2436 1.678101 GTCTGTTTGGTGAGCTTTGCT 59.322 47.619 0.00 0.00 43.88 3.91
2406 2439 1.064017 TGGGTCTGTTTGGTGAGCTTT 60.064 47.619 0.00 0.00 0.00 3.51
2477 2510 6.893554 ACTTGTAGTTAAACCAGGAACCTTTT 59.106 34.615 0.00 0.00 0.00 2.27
2478 2511 6.429151 ACTTGTAGTTAAACCAGGAACCTTT 58.571 36.000 0.00 0.00 0.00 3.11
2520 2590 5.044558 GGTGGAAAATCGTCTAGCTCTAAG 58.955 45.833 0.00 0.00 0.00 2.18
2533 2603 7.225341 GCAATGGATGAATTAAGGTGGAAAATC 59.775 37.037 0.00 0.00 0.00 2.17
2576 2646 4.446719 GCAAAAAGCAAAGGAGTTCAGATG 59.553 41.667 0.00 0.00 44.79 2.90
2592 2662 9.489393 GAACCAAATCTAAAAAGTTGCAAAAAG 57.511 29.630 0.00 0.00 0.00 2.27
2616 2687 7.436118 ACAGTTGACCGTAGTAACATAAAGAA 58.564 34.615 0.00 0.00 0.00 2.52
2617 2688 6.985117 ACAGTTGACCGTAGTAACATAAAGA 58.015 36.000 0.00 0.00 0.00 2.52
2624 2698 4.805192 TGACAAACAGTTGACCGTAGTAAC 59.195 41.667 0.00 0.00 38.20 2.50
2630 2704 2.159626 CGTTTGACAAACAGTTGACCGT 60.160 45.455 26.27 0.00 41.44 4.83
2632 2706 2.182014 GCGTTTGACAAACAGTTGACC 58.818 47.619 26.27 2.01 41.44 4.02
2643 2717 1.352404 CGGAAAACGGCGTTTGACA 59.648 52.632 35.23 0.00 35.80 3.58
2644 2718 2.007114 GCGGAAAACGGCGTTTGAC 61.007 57.895 35.23 28.90 44.51 3.18
2645 2719 0.879400 TAGCGGAAAACGGCGTTTGA 60.879 50.000 35.23 15.53 44.51 2.69
2646 2720 0.041135 TTAGCGGAAAACGGCGTTTG 60.041 50.000 35.23 24.27 44.51 2.93
2660 2737 3.564511 CCAAAACAAGGACACATTAGCG 58.435 45.455 0.00 0.00 0.00 4.26
2675 2752 5.126061 AGACATCTATCATGTTGGCCAAAAC 59.874 40.000 22.47 10.66 31.52 2.43
2723 2800 1.363744 CAAACGTTGGCTTGCCAAAA 58.636 45.000 26.12 5.28 0.00 2.44
2734 2811 5.215239 ACTTTTGATTTTGCCAAACGTTG 57.785 34.783 0.00 0.00 33.92 4.10
2735 2812 5.180304 ACAACTTTTGATTTTGCCAAACGTT 59.820 32.000 0.00 0.00 42.64 3.99
2736 2813 4.693095 ACAACTTTTGATTTTGCCAAACGT 59.307 33.333 0.00 0.00 37.51 3.99
2737 2814 5.215239 ACAACTTTTGATTTTGCCAAACG 57.785 34.783 0.00 0.00 33.74 3.60
2738 2815 5.062809 TCGACAACTTTTGATTTTGCCAAAC 59.937 36.000 0.00 0.00 33.74 2.93
2739 2816 5.062809 GTCGACAACTTTTGATTTTGCCAAA 59.937 36.000 11.55 0.00 0.00 3.28
2740 2817 4.564769 GTCGACAACTTTTGATTTTGCCAA 59.435 37.500 11.55 0.00 0.00 4.52
2741 2818 4.109050 GTCGACAACTTTTGATTTTGCCA 58.891 39.130 11.55 0.00 0.00 4.92
2742 2819 4.109050 TGTCGACAACTTTTGATTTTGCC 58.891 39.130 17.62 0.00 0.00 4.52
2743 2820 5.888412 ATGTCGACAACTTTTGATTTTGC 57.112 34.783 24.13 0.00 0.00 3.68
2744 2821 7.998212 GCTAAATGTCGACAACTTTTGATTTTG 59.002 33.333 24.13 16.14 36.31 2.44
2745 2822 7.704472 TGCTAAATGTCGACAACTTTTGATTTT 59.296 29.630 24.13 16.41 36.31 1.82
2746 2823 7.199766 TGCTAAATGTCGACAACTTTTGATTT 58.800 30.769 24.13 17.10 36.31 2.17
2747 2824 6.734137 TGCTAAATGTCGACAACTTTTGATT 58.266 32.000 24.13 6.64 36.31 2.57
2748 2825 6.312399 TGCTAAATGTCGACAACTTTTGAT 57.688 33.333 24.13 0.00 36.31 2.57
2749 2826 5.743026 TGCTAAATGTCGACAACTTTTGA 57.257 34.783 24.13 4.35 36.31 2.69
2750 2827 5.971202 AGTTGCTAAATGTCGACAACTTTTG 59.029 36.000 24.13 19.42 46.47 2.44
2751 2828 6.131544 AGTTGCTAAATGTCGACAACTTTT 57.868 33.333 24.13 19.92 46.47 2.27
2752 2829 5.751243 AGTTGCTAAATGTCGACAACTTT 57.249 34.783 24.13 20.63 46.47 2.66
2776 2853 8.188139 ACCAATTTTCGTTGCGAATCTTATAAT 58.812 29.630 4.79 0.00 45.28 1.28
2781 2858 4.237349 ACCAATTTTCGTTGCGAATCTT 57.763 36.364 4.79 0.04 45.28 2.40
2806 2883 1.871822 GCCGGATGTTGGTTTTGGTTG 60.872 52.381 5.05 0.00 0.00 3.77
2813 2890 1.244019 GCTTCAGCCGGATGTTGGTT 61.244 55.000 20.97 0.00 34.31 3.67
2814 2891 1.675641 GCTTCAGCCGGATGTTGGT 60.676 57.895 20.97 0.00 34.31 3.67
2815 2892 1.675310 TGCTTCAGCCGGATGTTGG 60.675 57.895 20.97 11.79 41.18 3.77
2816 2893 1.503542 GTGCTTCAGCCGGATGTTG 59.496 57.895 20.97 14.38 41.18 3.33
2818 2895 2.045926 GGTGCTTCAGCCGGATGT 60.046 61.111 20.97 0.00 41.18 3.06
2823 2900 0.169672 CAAAGATGGTGCTTCAGCCG 59.830 55.000 0.00 0.00 41.18 5.52
2825 2902 0.108945 GGCAAAGATGGTGCTTCAGC 60.109 55.000 0.00 0.00 41.88 4.26
2827 2904 0.961019 GTGGCAAAGATGGTGCTTCA 59.039 50.000 0.00 0.00 41.88 3.02
2828 2905 1.200948 GAGTGGCAAAGATGGTGCTTC 59.799 52.381 0.00 0.00 41.88 3.86
2829 2906 1.251251 GAGTGGCAAAGATGGTGCTT 58.749 50.000 0.00 0.00 41.88 3.91
2830 2907 0.610232 GGAGTGGCAAAGATGGTGCT 60.610 55.000 0.00 0.00 41.88 4.40
2831 2908 1.885871 GGAGTGGCAAAGATGGTGC 59.114 57.895 0.00 0.00 41.45 5.01
2833 2910 0.620556 ATCGGAGTGGCAAAGATGGT 59.379 50.000 0.00 0.00 0.00 3.55
2834 2911 1.019673 CATCGGAGTGGCAAAGATGG 58.980 55.000 12.15 0.00 36.13 3.51
2835 2912 1.938577 CTCATCGGAGTGGCAAAGATG 59.061 52.381 13.21 13.21 39.81 2.90
2836 2913 1.745141 GCTCATCGGAGTGGCAAAGAT 60.745 52.381 0.00 0.00 43.37 2.40
2839 2916 0.674581 CTGCTCATCGGAGTGGCAAA 60.675 55.000 0.00 0.00 43.37 3.68
2840 2917 1.078918 CTGCTCATCGGAGTGGCAA 60.079 57.895 0.00 0.00 43.37 4.52
2842 2919 2.894387 GCTGCTCATCGGAGTGGC 60.894 66.667 0.00 0.00 43.37 5.01
2843 2920 0.390492 TATGCTGCTCATCGGAGTGG 59.610 55.000 0.00 0.00 43.37 4.00
2844 2921 1.780806 CTATGCTGCTCATCGGAGTG 58.219 55.000 0.00 0.00 43.37 3.51
2846 2923 0.669932 GGCTATGCTGCTCATCGGAG 60.670 60.000 0.00 0.00 44.33 4.63
2847 2924 1.368950 GGCTATGCTGCTCATCGGA 59.631 57.895 0.00 0.00 36.63 4.55
2848 2925 2.025969 CGGCTATGCTGCTCATCGG 61.026 63.158 0.00 0.00 36.63 4.18
2850 2927 0.948141 GTCCGGCTATGCTGCTCATC 60.948 60.000 0.00 0.00 36.63 2.92
2851 2928 1.070445 GTCCGGCTATGCTGCTCAT 59.930 57.895 0.00 0.00 39.17 2.90
2853 2930 0.318441 TATGTCCGGCTATGCTGCTC 59.682 55.000 0.00 0.00 32.89 4.26
2855 2932 0.671781 CCTATGTCCGGCTATGCTGC 60.672 60.000 0.00 0.00 32.89 5.25
2856 2933 0.036952 CCCTATGTCCGGCTATGCTG 60.037 60.000 0.00 0.00 34.23 4.41
2857 2934 0.178932 TCCCTATGTCCGGCTATGCT 60.179 55.000 0.00 0.00 0.00 3.79
2858 2935 0.685097 TTCCCTATGTCCGGCTATGC 59.315 55.000 0.00 0.00 0.00 3.14
2859 2936 2.248248 TCTTCCCTATGTCCGGCTATG 58.752 52.381 0.00 0.00 0.00 2.23
2860 2937 2.696526 TCTTCCCTATGTCCGGCTAT 57.303 50.000 0.00 0.00 0.00 2.97
2862 2939 2.696526 TATCTTCCCTATGTCCGGCT 57.303 50.000 0.00 0.00 0.00 5.52
2863 2940 2.093447 CCATATCTTCCCTATGTCCGGC 60.093 54.545 0.00 0.00 0.00 6.13
2864 2941 2.501723 CCCATATCTTCCCTATGTCCGG 59.498 54.545 0.00 0.00 0.00 5.14
2865 2942 2.501723 CCCCATATCTTCCCTATGTCCG 59.498 54.545 0.00 0.00 0.00 4.79
2866 2943 3.803340 TCCCCATATCTTCCCTATGTCC 58.197 50.000 0.00 0.00 0.00 4.02
2867 2944 5.548056 TCTTTCCCCATATCTTCCCTATGTC 59.452 44.000 0.00 0.00 0.00 3.06
2868 2945 5.486332 TCTTTCCCCATATCTTCCCTATGT 58.514 41.667 0.00 0.00 0.00 2.29
2869 2946 6.454223 TTCTTTCCCCATATCTTCCCTATG 57.546 41.667 0.00 0.00 0.00 2.23
2870 2947 8.785859 CATATTCTTTCCCCATATCTTCCCTAT 58.214 37.037 0.00 0.00 0.00 2.57
2871 2948 7.311929 GCATATTCTTTCCCCATATCTTCCCTA 60.312 40.741 0.00 0.00 0.00 3.53
2872 2949 6.524891 GCATATTCTTTCCCCATATCTTCCCT 60.525 42.308 0.00 0.00 0.00 4.20
2873 2950 5.654209 GCATATTCTTTCCCCATATCTTCCC 59.346 44.000 0.00 0.00 0.00 3.97
2874 2951 5.654209 GGCATATTCTTTCCCCATATCTTCC 59.346 44.000 0.00 0.00 0.00 3.46
2875 2952 6.488715 AGGCATATTCTTTCCCCATATCTTC 58.511 40.000 0.00 0.00 0.00 2.87
2876 2953 6.474918 AGGCATATTCTTTCCCCATATCTT 57.525 37.500 0.00 0.00 0.00 2.40
2878 2955 5.196695 GGAGGCATATTCTTTCCCCATATC 58.803 45.833 0.00 0.00 0.00 1.63
2880 2957 3.009033 CGGAGGCATATTCTTTCCCCATA 59.991 47.826 0.00 0.00 0.00 2.74
2882 2959 1.142870 CGGAGGCATATTCTTTCCCCA 59.857 52.381 0.00 0.00 0.00 4.96
2883 2960 1.545651 CCGGAGGCATATTCTTTCCCC 60.546 57.143 0.00 0.00 46.14 4.81
2884 2961 1.897560 CCGGAGGCATATTCTTTCCC 58.102 55.000 0.00 0.00 46.14 3.97
2902 2979 4.273811 GGACGAAAACGGAGTCCC 57.726 61.111 2.80 0.00 45.00 4.46
2904 2981 3.891056 ATTTTGGACGAAAACGGAGTC 57.109 42.857 0.00 0.00 45.00 3.36
2906 2983 6.959311 CAGTTATATTTTGGACGAAAACGGAG 59.041 38.462 0.00 0.00 36.35 4.63
2907 2984 6.427547 ACAGTTATATTTTGGACGAAAACGGA 59.572 34.615 0.00 0.00 36.35 4.69
2908 2985 6.604930 ACAGTTATATTTTGGACGAAAACGG 58.395 36.000 0.00 0.00 36.35 4.44
2909 2986 8.496872 AAACAGTTATATTTTGGACGAAAACG 57.503 30.769 0.00 0.00 36.35 3.60
2911 2988 9.171701 CGAAAACAGTTATATTTTGGACGAAAA 57.828 29.630 0.00 0.00 37.93 2.29
2912 2989 8.344098 ACGAAAACAGTTATATTTTGGACGAAA 58.656 29.630 0.00 0.00 30.67 3.46
2913 2990 7.863666 ACGAAAACAGTTATATTTTGGACGAA 58.136 30.769 0.00 0.00 30.67 3.85
2914 2991 7.424227 ACGAAAACAGTTATATTTTGGACGA 57.576 32.000 0.00 0.00 30.67 4.20
2915 2992 7.005857 CGAACGAAAACAGTTATATTTTGGACG 59.994 37.037 0.00 0.00 30.67 4.79
2916 2993 7.269724 CCGAACGAAAACAGTTATATTTTGGAC 59.730 37.037 0.00 0.00 30.67 4.02
2917 2994 7.041235 ACCGAACGAAAACAGTTATATTTTGGA 60.041 33.333 9.46 0.00 30.67 3.53
2918 2995 7.079475 ACCGAACGAAAACAGTTATATTTTGG 58.921 34.615 0.00 0.00 31.92 3.28
2919 2996 8.496872 AACCGAACGAAAACAGTTATATTTTG 57.503 30.769 0.00 0.00 31.14 2.44
2920 2997 8.960075 CAAACCGAACGAAAACAGTTATATTTT 58.040 29.630 0.00 0.00 31.14 1.82
2929 3006 5.085636 TCATACAAACCGAACGAAAACAG 57.914 39.130 0.00 0.00 0.00 3.16
2931 3008 6.087159 GGATTTCATACAAACCGAACGAAAAC 59.913 38.462 0.00 0.00 0.00 2.43
2932 3009 6.144175 GGATTTCATACAAACCGAACGAAAA 58.856 36.000 0.00 0.00 0.00 2.29
2934 3011 4.143073 CGGATTTCATACAAACCGAACGAA 60.143 41.667 0.00 0.00 42.40 3.85
2937 3014 4.152759 TGACGGATTTCATACAAACCGAAC 59.847 41.667 0.00 0.00 42.40 3.95
2938 3015 4.316645 TGACGGATTTCATACAAACCGAA 58.683 39.130 0.00 0.00 42.40 4.30
2941 3018 5.560966 ACATGACGGATTTCATACAAACC 57.439 39.130 0.00 0.00 34.29 3.27
2951 3028 8.289618 CGGATTTCATATAAACATGACGGATTT 58.710 33.333 0.00 0.00 34.69 2.17
2954 3031 5.699001 CCGGATTTCATATAAACATGACGGA 59.301 40.000 0.00 0.00 40.55 4.69
2955 3032 5.616866 GCCGGATTTCATATAAACATGACGG 60.617 44.000 5.05 0.00 40.81 4.79
2956 3033 5.382303 GCCGGATTTCATATAAACATGACG 58.618 41.667 5.05 0.00 34.69 4.35
2957 3034 5.616866 CGGCCGGATTTCATATAAACATGAC 60.617 44.000 20.10 0.00 34.69 3.06
2958 3035 4.454161 CGGCCGGATTTCATATAAACATGA 59.546 41.667 20.10 0.00 33.10 3.07
2959 3036 4.454161 TCGGCCGGATTTCATATAAACATG 59.546 41.667 27.83 0.00 0.00 3.21
2964 3041 6.711194 TGTAAATTCGGCCGGATTTCATATAA 59.289 34.615 40.63 23.65 0.00 0.98
2965 3042 6.231951 TGTAAATTCGGCCGGATTTCATATA 58.768 36.000 40.63 24.34 0.00 0.86
2967 3044 4.452825 TGTAAATTCGGCCGGATTTCATA 58.547 39.130 40.63 26.72 0.00 2.15
2968 3045 3.283751 TGTAAATTCGGCCGGATTTCAT 58.716 40.909 40.63 24.51 0.00 2.57
2969 3046 2.712709 TGTAAATTCGGCCGGATTTCA 58.287 42.857 40.63 32.51 0.00 2.69
2970 3047 3.314080 TCATGTAAATTCGGCCGGATTTC 59.686 43.478 40.63 30.77 0.00 2.17
2972 3049 2.925724 TCATGTAAATTCGGCCGGATT 58.074 42.857 26.43 26.43 0.00 3.01
2973 3050 2.631160 TCATGTAAATTCGGCCGGAT 57.369 45.000 27.83 21.81 0.00 4.18
2974 3051 2.404923 TTCATGTAAATTCGGCCGGA 57.595 45.000 27.83 20.01 0.00 5.14
2975 3052 3.708563 AATTCATGTAAATTCGGCCGG 57.291 42.857 27.83 6.80 0.00 6.13
3002 3079 8.614469 TTTCAAACTCTTTTTCAACAAACCAT 57.386 26.923 0.00 0.00 0.00 3.55
3003 3080 8.502387 CATTTCAAACTCTTTTTCAACAAACCA 58.498 29.630 0.00 0.00 0.00 3.67
3008 3085 8.816144 GCATACATTTCAAACTCTTTTTCAACA 58.184 29.630 0.00 0.00 0.00 3.33
3009 3086 8.816144 TGCATACATTTCAAACTCTTTTTCAAC 58.184 29.630 0.00 0.00 0.00 3.18
3010 3087 8.939201 TGCATACATTTCAAACTCTTTTTCAA 57.061 26.923 0.00 0.00 0.00 2.69
3012 3089 7.383300 AGCTGCATACATTTCAAACTCTTTTTC 59.617 33.333 1.02 0.00 0.00 2.29
3013 3090 7.212274 AGCTGCATACATTTCAAACTCTTTTT 58.788 30.769 1.02 0.00 0.00 1.94
3014 3091 6.752168 AGCTGCATACATTTCAAACTCTTTT 58.248 32.000 1.02 0.00 0.00 2.27
3015 3092 6.336842 AGCTGCATACATTTCAAACTCTTT 57.663 33.333 1.02 0.00 0.00 2.52
3016 3093 5.972107 AGCTGCATACATTTCAAACTCTT 57.028 34.783 1.02 0.00 0.00 2.85
3017 3094 5.065731 GCTAGCTGCATACATTTCAAACTCT 59.934 40.000 7.70 0.00 42.31 3.24
3019 3096 4.201851 CGCTAGCTGCATACATTTCAAACT 60.202 41.667 13.93 0.00 43.06 2.66
3020 3097 4.031028 CGCTAGCTGCATACATTTCAAAC 58.969 43.478 13.93 0.00 43.06 2.93
3021 3098 3.689161 ACGCTAGCTGCATACATTTCAAA 59.311 39.130 13.93 0.00 43.06 2.69
3022 3099 3.270027 ACGCTAGCTGCATACATTTCAA 58.730 40.909 13.93 0.00 43.06 2.69
3023 3100 2.905075 ACGCTAGCTGCATACATTTCA 58.095 42.857 13.93 0.00 43.06 2.69
3026 3103 2.905075 TCAACGCTAGCTGCATACATT 58.095 42.857 13.93 0.00 43.06 2.71
3027 3104 2.602257 TCAACGCTAGCTGCATACAT 57.398 45.000 13.93 0.00 43.06 2.29
3028 3105 2.270923 CTTCAACGCTAGCTGCATACA 58.729 47.619 13.93 0.00 43.06 2.29
3029 3106 1.594862 CCTTCAACGCTAGCTGCATAC 59.405 52.381 13.93 0.00 43.06 2.39
3031 3108 0.250234 TCCTTCAACGCTAGCTGCAT 59.750 50.000 13.93 0.00 43.06 3.96
3032 3109 0.670546 GTCCTTCAACGCTAGCTGCA 60.671 55.000 13.93 0.00 43.06 4.41
3033 3110 1.687494 CGTCCTTCAACGCTAGCTGC 61.687 60.000 13.93 0.00 35.64 5.25
3034 3111 1.078759 CCGTCCTTCAACGCTAGCTG 61.079 60.000 13.93 9.03 41.26 4.24
3035 3112 1.215647 CCGTCCTTCAACGCTAGCT 59.784 57.895 13.93 0.00 41.26 3.32
3036 3113 2.453638 GCCGTCCTTCAACGCTAGC 61.454 63.158 4.06 4.06 41.26 3.42
3037 3114 1.810030 GGCCGTCCTTCAACGCTAG 60.810 63.158 0.00 0.00 41.26 3.42
3038 3115 2.221906 GAGGCCGTCCTTCAACGCTA 62.222 60.000 0.00 0.00 44.46 4.26
3039 3116 3.591254 GAGGCCGTCCTTCAACGCT 62.591 63.158 0.00 0.00 44.46 5.07
3041 3118 1.446272 GAGAGGCCGTCCTTCAACG 60.446 63.158 0.00 0.00 44.46 4.10
3043 3120 2.970639 CGAGAGGCCGTCCTTCAA 59.029 61.111 0.00 0.00 44.46 2.69
3045 3122 2.962697 GATGCGAGAGGCCGTCCTTC 62.963 65.000 0.00 0.00 44.46 3.46
3046 3123 3.077556 ATGCGAGAGGCCGTCCTT 61.078 61.111 0.00 0.00 44.46 3.36
3048 3125 3.532155 AGATGCGAGAGGCCGTCC 61.532 66.667 0.00 0.00 42.61 4.79
3049 3126 1.725557 TACAGATGCGAGAGGCCGTC 61.726 60.000 0.00 0.00 42.61 4.79
3050 3127 1.109920 ATACAGATGCGAGAGGCCGT 61.110 55.000 0.00 0.00 42.61 5.68
3051 3128 0.387878 GATACAGATGCGAGAGGCCG 60.388 60.000 0.00 0.00 42.61 6.13
3052 3129 0.965439 AGATACAGATGCGAGAGGCC 59.035 55.000 0.00 0.00 42.61 5.19
3053 3130 1.339610 ACAGATACAGATGCGAGAGGC 59.660 52.381 0.00 0.00 43.96 4.70
3054 3131 2.288091 CCACAGATACAGATGCGAGAGG 60.288 54.545 0.00 0.00 0.00 3.69
3058 3135 2.099756 CAGTCCACAGATACAGATGCGA 59.900 50.000 0.00 0.00 0.00 5.10
3059 3136 2.467838 CAGTCCACAGATACAGATGCG 58.532 52.381 0.00 0.00 0.00 4.73
3060 3137 2.169352 ACCAGTCCACAGATACAGATGC 59.831 50.000 0.00 0.00 0.00 3.91
3061 3138 4.052159 GACCAGTCCACAGATACAGATG 57.948 50.000 0.00 0.00 0.00 2.90
3092 3169 4.873129 CTCCCGCATCCGTCCGTG 62.873 72.222 0.00 0.00 0.00 4.94
3094 3171 2.845752 TTTTCTCCCGCATCCGTCCG 62.846 60.000 0.00 0.00 0.00 4.79
3095 3172 0.463833 ATTTTCTCCCGCATCCGTCC 60.464 55.000 0.00 0.00 0.00 4.79
3096 3173 1.379527 AATTTTCTCCCGCATCCGTC 58.620 50.000 0.00 0.00 0.00 4.79
3097 3174 1.472480 CAAATTTTCTCCCGCATCCGT 59.528 47.619 0.00 0.00 0.00 4.69
3098 3175 1.798813 GCAAATTTTCTCCCGCATCCG 60.799 52.381 0.00 0.00 0.00 4.18
3099 3176 1.798813 CGCAAATTTTCTCCCGCATCC 60.799 52.381 0.00 0.00 0.00 3.51
3100 3177 1.548986 CGCAAATTTTCTCCCGCATC 58.451 50.000 0.00 0.00 0.00 3.91
3101 3178 0.173255 CCGCAAATTTTCTCCCGCAT 59.827 50.000 0.00 0.00 0.00 4.73
3102 3179 0.891449 TCCGCAAATTTTCTCCCGCA 60.891 50.000 0.00 0.00 0.00 5.69
3103 3180 0.455815 ATCCGCAAATTTTCTCCCGC 59.544 50.000 0.00 0.00 0.00 6.13
3105 3182 3.511699 GACAATCCGCAAATTTTCTCCC 58.488 45.455 0.00 0.00 0.00 4.30
3106 3183 3.171277 CGACAATCCGCAAATTTTCTCC 58.829 45.455 0.00 0.00 0.00 3.71
3107 3184 3.821841 ACGACAATCCGCAAATTTTCTC 58.178 40.909 0.00 0.00 0.00 2.87
3109 3186 3.121113 CCAACGACAATCCGCAAATTTTC 59.879 43.478 0.00 0.00 0.00 2.29
3112 3189 1.883275 TCCAACGACAATCCGCAAATT 59.117 42.857 0.00 0.00 0.00 1.82
3113 3190 1.468520 CTCCAACGACAATCCGCAAAT 59.531 47.619 0.00 0.00 0.00 2.32
3115 3192 0.034198 TCTCCAACGACAATCCGCAA 59.966 50.000 0.00 0.00 0.00 4.85
3117 3194 0.652592 CATCTCCAACGACAATCCGC 59.347 55.000 0.00 0.00 0.00 5.54
3118 3195 0.652592 GCATCTCCAACGACAATCCG 59.347 55.000 0.00 0.00 0.00 4.18
3119 3196 1.017387 GGCATCTCCAACGACAATCC 58.983 55.000 0.00 0.00 34.01 3.01
3120 3197 1.017387 GGGCATCTCCAACGACAATC 58.983 55.000 0.00 0.00 36.21 2.67
3122 3199 1.271856 TAGGGCATCTCCAACGACAA 58.728 50.000 0.00 0.00 36.21 3.18
3123 3200 1.271856 TTAGGGCATCTCCAACGACA 58.728 50.000 0.00 0.00 36.21 4.35
3126 3203 1.006832 CGTTTAGGGCATCTCCAACG 58.993 55.000 8.32 8.32 36.55 4.10
3127 3204 0.733150 GCGTTTAGGGCATCTCCAAC 59.267 55.000 0.00 0.00 36.21 3.77
3130 3207 1.413077 AGTAGCGTTTAGGGCATCTCC 59.587 52.381 0.00 0.00 0.00 3.71
3131 3208 2.892784 AGTAGCGTTTAGGGCATCTC 57.107 50.000 0.00 0.00 0.00 2.75
3132 3209 3.629142 AAAGTAGCGTTTAGGGCATCT 57.371 42.857 0.00 0.00 0.00 2.90
3136 3213 8.151141 AGATTTATAAAAGTAGCGTTTAGGGC 57.849 34.615 1.21 0.00 0.00 5.19
3163 3240 8.964772 AGAGACAATAGCAAGATAGCAAATTTT 58.035 29.630 0.00 0.00 36.85 1.82
3164 3241 8.517062 AGAGACAATAGCAAGATAGCAAATTT 57.483 30.769 0.00 0.00 36.85 1.82
3165 3242 9.790344 ATAGAGACAATAGCAAGATAGCAAATT 57.210 29.630 0.00 0.00 36.85 1.82
3166 3243 9.790344 AATAGAGACAATAGCAAGATAGCAAAT 57.210 29.630 0.00 0.00 36.85 2.32
3167 3244 9.618890 AAATAGAGACAATAGCAAGATAGCAAA 57.381 29.630 0.00 0.00 36.85 3.68
3168 3245 9.265901 GAAATAGAGACAATAGCAAGATAGCAA 57.734 33.333 0.00 0.00 36.85 3.91
3169 3246 7.596621 CGAAATAGAGACAATAGCAAGATAGCA 59.403 37.037 0.00 0.00 36.85 3.49
3170 3247 7.596995 ACGAAATAGAGACAATAGCAAGATAGC 59.403 37.037 0.00 0.00 0.00 2.97
3171 3248 9.123709 GACGAAATAGAGACAATAGCAAGATAG 57.876 37.037 0.00 0.00 0.00 2.08
3172 3249 8.082852 GGACGAAATAGAGACAATAGCAAGATA 58.917 37.037 0.00 0.00 0.00 1.98
3179 3292 7.759886 TGAGTTTGGACGAAATAGAGACAATAG 59.240 37.037 0.00 0.00 0.00 1.73
3185 3298 5.723672 ACTGAGTTTGGACGAAATAGAGA 57.276 39.130 0.00 0.00 0.00 3.10
3190 3303 4.579869 AGCATACTGAGTTTGGACGAAAT 58.420 39.130 5.24 0.00 0.00 2.17
3194 3307 3.067106 ACAAGCATACTGAGTTTGGACG 58.933 45.455 5.24 0.00 0.00 4.79
3205 3318 4.074259 TGAATCAGCAACACAAGCATACT 58.926 39.130 0.00 0.00 0.00 2.12
3212 3325 2.224018 GGCCTTTGAATCAGCAACACAA 60.224 45.455 0.00 0.00 0.00 3.33
3236 3349 2.031163 GTGACCAGCGGCAGAGTT 59.969 61.111 1.45 0.00 0.00 3.01
3242 3355 3.414700 CAACGAGTGACCAGCGGC 61.415 66.667 0.00 0.00 0.00 6.53
3243 3356 0.172578 TATCAACGAGTGACCAGCGG 59.827 55.000 0.00 0.00 39.72 5.52
3252 3365 9.607285 GACAAAACAATAACATTATCAACGAGT 57.393 29.630 0.00 0.00 0.00 4.18
3274 3387 6.480763 TGGAAGATTGTAAATGCTAGGACAA 58.519 36.000 0.00 0.00 36.32 3.18
3281 3394 6.855763 TTCCAATGGAAGATTGTAAATGCT 57.144 33.333 11.23 0.00 36.71 3.79
3328 3443 7.121907 TGTTATACAGCATGCCAAACTAAATGA 59.878 33.333 15.66 0.00 42.53 2.57
3334 3449 4.078537 TGTGTTATACAGCATGCCAAACT 58.921 39.130 15.66 0.00 42.53 2.66
3356 3471 4.124851 GGATACAAATCTCTGACGTGGT 57.875 45.455 0.00 0.00 32.29 4.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.