Multiple sequence alignment - TraesCS4A01G376600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G376600 chr4A 100.000 6242 0 0 1 6242 651346391 651352632 0.000000e+00 11527.0
1 TraesCS4A01G376600 chr7D 88.396 3292 254 71 2505 5745 437640691 437637477 0.000000e+00 3845.0
2 TraesCS4A01G376600 chr7D 94.451 1766 55 20 2880 4642 43202214 43203939 0.000000e+00 2678.0
3 TraesCS4A01G376600 chr7D 89.522 1193 80 21 4680 5843 43203942 43205118 0.000000e+00 1469.0
4 TraesCS4A01G376600 chr7D 90.551 1016 71 14 789 1800 43200307 43201301 0.000000e+00 1321.0
5 TraesCS4A01G376600 chr7D 86.444 1077 122 12 789 1858 437645395 437644336 0.000000e+00 1158.0
6 TraesCS4A01G376600 chr7D 93.182 616 26 5 2296 2897 43201582 43202195 0.000000e+00 891.0
7 TraesCS4A01G376600 chr7D 82.514 732 45 22 86 792 43199567 43200240 3.270000e-157 566.0
8 TraesCS4A01G376600 chr7D 89.688 320 30 3 2179 2496 437642157 437641839 7.530000e-109 405.0
9 TraesCS4A01G376600 chr7D 87.143 210 21 3 1861 2069 437644037 437643833 3.760000e-57 233.0
10 TraesCS4A01G376600 chr7D 96.203 79 3 0 2173 2251 43201501 43201579 5.080000e-26 130.0
11 TraesCS4A01G376600 chr7D 84.034 119 9 3 5892 6009 43205126 43205235 8.560000e-19 106.0
12 TraesCS4A01G376600 chr7D 85.542 83 9 2 5651 5732 55413293 55413373 4.010000e-12 84.2
13 TraesCS4A01G376600 chr7D 91.803 61 4 1 5794 5853 437637476 437637416 4.010000e-12 84.2
14 TraesCS4A01G376600 chr7A 89.788 2967 204 51 2505 5417 488154373 488151452 0.000000e+00 3709.0
15 TraesCS4A01G376600 chr7A 89.720 2967 201 52 2505 5417 488489244 488486328 0.000000e+00 3694.0
16 TraesCS4A01G376600 chr7A 91.863 2249 128 20 2176 4401 43047759 43049975 0.000000e+00 3088.0
17 TraesCS4A01G376600 chr7A 88.529 1203 107 21 4584 5776 43062026 43063207 0.000000e+00 1428.0
18 TraesCS4A01G376600 chr7A 89.932 1033 78 14 803 1823 43046403 43047421 0.000000e+00 1308.0
19 TraesCS4A01G376600 chr7A 86.101 1072 119 15 795 1858 488159380 488158331 0.000000e+00 1127.0
20 TraesCS4A01G376600 chr7A 88.119 707 77 4 795 1500 488499691 488498991 0.000000e+00 833.0
21 TraesCS4A01G376600 chr7A 87.010 485 32 20 322 792 43045732 43046199 9.280000e-143 518.0
22 TraesCS4A01G376600 chr7A 90.596 319 29 1 2179 2496 488491027 488490709 7.480000e-114 422.0
23 TraesCS4A01G376600 chr7A 89.342 319 31 2 2179 2496 488156161 488155845 1.260000e-106 398.0
24 TraesCS4A01G376600 chr7A 87.619 210 15 4 1861 2069 488157919 488157720 3.760000e-57 233.0
25 TraesCS4A01G376600 chr7A 86.473 207 17 4 1864 2069 488495613 488495417 3.790000e-52 217.0
26 TraesCS4A01G376600 chr7A 84.689 209 18 5 1858 2063 43047484 43047681 4.940000e-46 196.0
27 TraesCS4A01G376600 chr7A 87.421 159 13 5 1484 1642 488498957 488498806 6.430000e-40 176.0
28 TraesCS4A01G376600 chr7A 86.420 162 12 3 92 252 43045562 43045714 1.080000e-37 169.0
29 TraesCS4A01G376600 chr7A 80.000 190 27 6 1663 1850 488496066 488495886 5.080000e-26 130.0
30 TraesCS4A01G376600 chr7A 84.337 83 10 2 5651 5732 59402320 59402400 1.870000e-10 78.7
31 TraesCS4A01G376600 chr7B 90.385 2829 195 43 2505 5281 456493270 456496073 0.000000e+00 3646.0
32 TraesCS4A01G376600 chr7B 87.232 932 102 11 789 1717 456488241 456489158 0.000000e+00 1046.0
33 TraesCS4A01G376600 chr7B 89.100 211 16 4 1858 2067 456489490 456489694 8.030000e-64 255.0
34 TraesCS4A01G376600 chr7B 85.950 242 23 5 2254 2493 456491675 456491907 1.340000e-61 248.0
35 TraesCS4A01G376600 chr1A 78.797 349 35 20 85 426 352851969 352852285 1.370000e-46 198.0
36 TraesCS4A01G376600 chr1D 88.889 162 9 8 270 426 280681558 280681715 2.300000e-44 191.0
37 TraesCS4A01G376600 chrUn 79.856 139 14 9 1898 2031 194684324 194684195 8.620000e-14 89.8
38 TraesCS4A01G376600 chrUn 79.856 139 14 9 1898 2031 304595359 304595230 8.620000e-14 89.8
39 TraesCS4A01G376600 chrUn 86.885 61 8 0 3 63 258245113 258245053 1.120000e-07 69.4
40 TraesCS4A01G376600 chrUn 85.246 61 9 0 3 63 473849944 473850004 5.220000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G376600 chr4A 651346391 651352632 6241 False 11527.00 11527 100.000000 1 6242 1 chr4A.!!$F1 6241
1 TraesCS4A01G376600 chr7D 437637416 437645395 7979 True 1145.04 3845 88.694800 789 5853 5 chr7D.!!$R1 5064
2 TraesCS4A01G376600 chr7D 43199567 43205235 5668 False 1023.00 2678 90.065286 86 6009 7 chr7D.!!$F2 5923
3 TraesCS4A01G376600 chr7A 488486328 488491027 4699 True 2058.00 3694 90.158000 2179 5417 2 chr7A.!!$R2 3238
4 TraesCS4A01G376600 chr7A 43062026 43063207 1181 False 1428.00 1428 88.529000 4584 5776 1 chr7A.!!$F1 1192
5 TraesCS4A01G376600 chr7A 488151452 488159380 7928 True 1366.75 3709 88.212500 795 5417 4 chr7A.!!$R1 4622
6 TraesCS4A01G376600 chr7A 43045562 43049975 4413 False 1055.80 3088 87.982800 92 4401 5 chr7A.!!$F3 4309
7 TraesCS4A01G376600 chr7A 488495417 488499691 4274 True 339.00 833 85.503250 795 2069 4 chr7A.!!$R3 1274
8 TraesCS4A01G376600 chr7B 456488241 456496073 7832 False 1298.75 3646 88.166750 789 5281 4 chr7B.!!$F1 4492

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
255 261 0.179054 GAACCTTATCCAGCCGACCC 60.179 60.000 0.00 0.0 0.00 4.46 F
1209 1443 0.040499 AGGTCTCCTCTCCACTCCAC 59.960 60.000 0.00 0.0 0.00 4.02 F
1642 1937 0.031857 TTTTGGCCTGATGCAACACG 59.968 50.000 3.32 0.0 43.89 4.49 F
1730 4746 0.109342 AGGACAGCCTCAACACCTTG 59.891 55.000 0.00 0.0 42.19 3.61 F
2941 9821 0.036732 GCAAGATCACCTGTCACCCA 59.963 55.000 0.00 0.0 0.00 4.51 F
3308 10188 8.687824 GCTTATGCTAGCAAGAACAATTTAAA 57.312 30.769 23.54 0.0 40.89 1.52 F
4884 11827 0.393537 AGCAAGCAGGCAGGATGTAC 60.394 55.000 2.37 0.0 39.31 2.90 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1601 1895 0.618680 TCAGGATACCAGCACAGCCT 60.619 55.0 0.00 0.00 37.17 4.58 R
2071 7252 0.720232 TAGGGGCTGGAAAGGGACTA 59.280 55.0 0.00 0.00 38.49 2.59 R
2575 9411 0.883153 GGCATGTCACAATCAGCACA 59.117 50.0 0.00 0.00 0.00 4.57 R
3708 10595 0.680921 CTCGTGTTGCCCAATCCCAT 60.681 55.0 0.00 0.00 0.00 4.00 R
3859 10754 1.051812 AGCGTATGAGGGGGAATCAG 58.948 55.0 0.00 0.00 0.00 2.90 R
5121 12072 0.898320 CCATGACTGTTCCGAGTCCT 59.102 55.0 0.00 0.00 41.59 3.85 R
6121 13105 0.385098 AAGTTCGCGCGTAAAAAGCC 60.385 50.0 30.98 7.04 0.00 4.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.644418 TGCAGCGTGCCATTTGTC 59.356 55.556 7.38 0.00 44.23 3.18
18 19 2.502510 GCAGCGTGCCATTTGTCG 60.503 61.111 0.00 0.00 37.42 4.35
19 20 2.945984 CAGCGTGCCATTTGTCGT 59.054 55.556 0.00 0.00 0.00 4.34
20 21 1.906994 GCAGCGTGCCATTTGTCGTA 61.907 55.000 0.00 0.00 37.42 3.43
21 22 0.515127 CAGCGTGCCATTTGTCGTAA 59.485 50.000 0.00 0.00 0.00 3.18
22 23 0.515564 AGCGTGCCATTTGTCGTAAC 59.484 50.000 0.00 0.00 0.00 2.50
23 24 0.453782 GCGTGCCATTTGTCGTAACC 60.454 55.000 0.00 0.00 0.00 2.85
24 25 1.153353 CGTGCCATTTGTCGTAACCT 58.847 50.000 0.00 0.00 0.00 3.50
25 26 1.136085 CGTGCCATTTGTCGTAACCTG 60.136 52.381 0.00 0.00 0.00 4.00
26 27 2.147958 GTGCCATTTGTCGTAACCTGA 58.852 47.619 0.00 0.00 0.00 3.86
27 28 2.159627 GTGCCATTTGTCGTAACCTGAG 59.840 50.000 0.00 0.00 0.00 3.35
28 29 1.737793 GCCATTTGTCGTAACCTGAGG 59.262 52.381 0.00 0.00 0.00 3.86
29 30 2.614481 GCCATTTGTCGTAACCTGAGGA 60.614 50.000 4.99 0.00 0.00 3.71
30 31 3.262420 CCATTTGTCGTAACCTGAGGAG 58.738 50.000 4.99 0.00 0.00 3.69
31 32 3.056107 CCATTTGTCGTAACCTGAGGAGA 60.056 47.826 4.99 0.00 0.00 3.71
32 33 4.383118 CCATTTGTCGTAACCTGAGGAGAT 60.383 45.833 4.99 0.00 0.00 2.75
33 34 3.868757 TTGTCGTAACCTGAGGAGATG 57.131 47.619 4.99 0.00 0.00 2.90
34 35 2.100197 TGTCGTAACCTGAGGAGATGG 58.900 52.381 4.99 0.00 0.00 3.51
35 36 1.409427 GTCGTAACCTGAGGAGATGGG 59.591 57.143 4.99 0.00 0.00 4.00
36 37 1.286849 TCGTAACCTGAGGAGATGGGA 59.713 52.381 4.99 0.00 0.00 4.37
37 38 1.683917 CGTAACCTGAGGAGATGGGAG 59.316 57.143 4.99 0.00 0.00 4.30
38 39 2.753247 GTAACCTGAGGAGATGGGAGT 58.247 52.381 4.99 0.00 0.00 3.85
39 40 1.577736 AACCTGAGGAGATGGGAGTG 58.422 55.000 4.99 0.00 0.00 3.51
40 41 0.712979 ACCTGAGGAGATGGGAGTGA 59.287 55.000 4.99 0.00 0.00 3.41
41 42 1.293458 ACCTGAGGAGATGGGAGTGAT 59.707 52.381 4.99 0.00 0.00 3.06
42 43 1.969923 CCTGAGGAGATGGGAGTGATC 59.030 57.143 0.00 0.00 0.00 2.92
43 44 2.426121 CCTGAGGAGATGGGAGTGATCT 60.426 54.545 0.00 0.00 32.63 2.75
44 45 3.307506 CTGAGGAGATGGGAGTGATCTT 58.692 50.000 0.00 0.00 29.97 2.40
45 46 3.710677 CTGAGGAGATGGGAGTGATCTTT 59.289 47.826 0.00 0.00 29.97 2.52
46 47 3.453717 TGAGGAGATGGGAGTGATCTTTG 59.546 47.826 0.00 0.00 29.97 2.77
47 48 2.776536 AGGAGATGGGAGTGATCTTTGG 59.223 50.000 0.00 0.00 29.97 3.28
48 49 2.774234 GGAGATGGGAGTGATCTTTGGA 59.226 50.000 0.00 0.00 29.97 3.53
49 50 3.181456 GGAGATGGGAGTGATCTTTGGAG 60.181 52.174 0.00 0.00 29.97 3.86
50 51 2.172293 AGATGGGAGTGATCTTTGGAGC 59.828 50.000 0.00 0.00 0.00 4.70
51 52 0.250234 TGGGAGTGATCTTTGGAGCG 59.750 55.000 0.00 0.00 0.00 5.03
52 53 0.537188 GGGAGTGATCTTTGGAGCGA 59.463 55.000 0.00 0.00 0.00 4.93
53 54 1.472376 GGGAGTGATCTTTGGAGCGAG 60.472 57.143 0.00 0.00 0.00 5.03
54 55 1.205893 GGAGTGATCTTTGGAGCGAGT 59.794 52.381 0.00 0.00 0.00 4.18
55 56 2.427453 GGAGTGATCTTTGGAGCGAGTA 59.573 50.000 0.00 0.00 0.00 2.59
56 57 3.440228 GAGTGATCTTTGGAGCGAGTAC 58.560 50.000 0.00 0.00 0.00 2.73
57 58 3.093057 AGTGATCTTTGGAGCGAGTACT 58.907 45.455 0.00 0.00 0.00 2.73
58 59 3.129638 AGTGATCTTTGGAGCGAGTACTC 59.870 47.826 13.18 13.18 35.86 2.59
68 69 4.477302 GAGCGAGTACTCCTTAGCTTAG 57.523 50.000 19.76 0.00 37.51 2.18
69 70 2.619646 AGCGAGTACTCCTTAGCTTAGC 59.380 50.000 17.23 10.84 34.96 3.09
70 71 2.619646 GCGAGTACTCCTTAGCTTAGCT 59.380 50.000 17.23 12.67 43.41 3.32
71 72 3.814283 GCGAGTACTCCTTAGCTTAGCTA 59.186 47.826 17.23 10.21 40.44 3.32
72 73 4.083696 GCGAGTACTCCTTAGCTTAGCTAG 60.084 50.000 17.23 7.09 42.34 3.42
73 74 5.058490 CGAGTACTCCTTAGCTTAGCTAGT 58.942 45.833 17.23 12.57 42.34 2.57
74 75 5.049954 CGAGTACTCCTTAGCTTAGCTAGTG 60.050 48.000 17.23 10.85 42.34 2.74
75 76 6.003859 AGTACTCCTTAGCTTAGCTAGTGA 57.996 41.667 13.93 12.87 42.34 3.41
76 77 6.607019 AGTACTCCTTAGCTTAGCTAGTGAT 58.393 40.000 13.93 3.69 42.34 3.06
77 78 7.064229 AGTACTCCTTAGCTTAGCTAGTGATT 58.936 38.462 13.93 10.88 42.34 2.57
78 79 6.800072 ACTCCTTAGCTTAGCTAGTGATTT 57.200 37.500 13.93 3.18 42.34 2.17
79 80 6.811954 ACTCCTTAGCTTAGCTAGTGATTTC 58.188 40.000 13.93 0.00 42.34 2.17
80 81 5.833082 TCCTTAGCTTAGCTAGTGATTTCG 58.167 41.667 13.93 0.17 42.34 3.46
81 82 4.985409 CCTTAGCTTAGCTAGTGATTTCGG 59.015 45.833 13.93 3.16 42.34 4.30
82 83 3.460857 AGCTTAGCTAGTGATTTCGGG 57.539 47.619 4.30 0.00 36.99 5.14
83 84 3.031736 AGCTTAGCTAGTGATTTCGGGA 58.968 45.455 4.30 0.00 36.99 5.14
84 85 3.451178 AGCTTAGCTAGTGATTTCGGGAA 59.549 43.478 4.30 0.00 36.99 3.97
85 86 4.081087 AGCTTAGCTAGTGATTTCGGGAAA 60.081 41.667 4.30 0.00 36.99 3.13
86 87 4.634443 GCTTAGCTAGTGATTTCGGGAAAA 59.366 41.667 0.00 0.00 33.56 2.29
87 88 5.297029 GCTTAGCTAGTGATTTCGGGAAAAT 59.703 40.000 0.00 0.00 40.34 1.82
88 89 6.183360 GCTTAGCTAGTGATTTCGGGAAAATT 60.183 38.462 0.00 0.00 37.70 1.82
89 90 5.819825 AGCTAGTGATTTCGGGAAAATTC 57.180 39.130 0.00 0.00 37.70 2.17
90 91 4.640647 AGCTAGTGATTTCGGGAAAATTCC 59.359 41.667 3.49 3.49 46.82 3.01
91 92 4.640647 GCTAGTGATTTCGGGAAAATTCCT 59.359 41.667 11.75 0.00 46.72 3.36
140 141 2.888863 CAGCCCACTCTCTCGACC 59.111 66.667 0.00 0.00 0.00 4.79
144 145 2.037367 CCACTCTCTCGACCCCCA 59.963 66.667 0.00 0.00 0.00 4.96
180 181 4.558538 GCCAGTCAGCCATATAACAAAG 57.441 45.455 0.00 0.00 0.00 2.77
187 188 4.570772 TCAGCCATATAACAAAGAGCGAAC 59.429 41.667 0.00 0.00 0.00 3.95
206 208 5.498159 CGAACATTTGAGTTTTTGACGAGA 58.502 37.500 0.00 0.00 0.00 4.04
207 209 5.963004 CGAACATTTGAGTTTTTGACGAGAA 59.037 36.000 0.00 0.00 0.00 2.87
208 210 6.139169 CGAACATTTGAGTTTTTGACGAGAAG 59.861 38.462 0.00 0.00 0.00 2.85
209 211 6.677781 ACATTTGAGTTTTTGACGAGAAGA 57.322 33.333 0.00 0.00 0.00 2.87
250 256 0.529992 CCGTCGAACCTTATCCAGCC 60.530 60.000 0.00 0.00 0.00 4.85
251 257 0.870307 CGTCGAACCTTATCCAGCCG 60.870 60.000 0.00 0.00 0.00 5.52
252 258 0.458669 GTCGAACCTTATCCAGCCGA 59.541 55.000 0.00 0.00 0.00 5.54
253 259 0.458669 TCGAACCTTATCCAGCCGAC 59.541 55.000 0.00 0.00 0.00 4.79
254 260 0.529992 CGAACCTTATCCAGCCGACC 60.530 60.000 0.00 0.00 0.00 4.79
255 261 0.179054 GAACCTTATCCAGCCGACCC 60.179 60.000 0.00 0.00 0.00 4.46
256 262 0.620700 AACCTTATCCAGCCGACCCT 60.621 55.000 0.00 0.00 0.00 4.34
257 263 0.263765 ACCTTATCCAGCCGACCCTA 59.736 55.000 0.00 0.00 0.00 3.53
258 264 1.343681 ACCTTATCCAGCCGACCCTAA 60.344 52.381 0.00 0.00 0.00 2.69
259 265 1.766496 CCTTATCCAGCCGACCCTAAA 59.234 52.381 0.00 0.00 0.00 1.85
260 266 2.171870 CCTTATCCAGCCGACCCTAAAA 59.828 50.000 0.00 0.00 0.00 1.52
261 267 3.371166 CCTTATCCAGCCGACCCTAAAAA 60.371 47.826 0.00 0.00 0.00 1.94
315 321 3.039988 CGTGTCTGTCCGGTGTCT 58.960 61.111 0.00 0.00 0.00 3.41
374 380 3.768922 GCAGCGAGCAGTCCTCCT 61.769 66.667 0.00 0.00 44.79 3.69
479 492 3.112709 GCGTTCGTCCAGCCTGAC 61.113 66.667 0.00 0.00 0.00 3.51
541 568 1.072965 CCCCCATCTAGCCATCTCAAC 59.927 57.143 0.00 0.00 0.00 3.18
542 569 1.072965 CCCCATCTAGCCATCTCAACC 59.927 57.143 0.00 0.00 0.00 3.77
560 588 3.859411 ACCTCTCAACTCGAGCTTAAG 57.141 47.619 13.61 5.37 41.98 1.85
651 679 2.005971 AATTCTCGTTGCCCGTAGTC 57.994 50.000 0.00 0.00 37.94 2.59
731 759 9.866655 TCAATATAATTTACAGGAAGCCAAGAT 57.133 29.630 0.00 0.00 0.00 2.40
746 774 9.521503 GGAAGCCAAGATGAATAAAAGAAATAC 57.478 33.333 0.00 0.00 0.00 1.89
749 777 9.247861 AGCCAAGATGAATAAAAGAAATACTGT 57.752 29.630 0.00 0.00 0.00 3.55
786 817 2.045561 TTTCAAGCTCAAACCACGGA 57.954 45.000 0.00 0.00 0.00 4.69
834 1060 9.276590 CTGGAAGATATCATATTGCAGTTTGTA 57.723 33.333 13.37 0.00 42.55 2.41
885 1111 3.213206 TGTCTCCATTTTGCAGTCAGT 57.787 42.857 0.00 0.00 0.00 3.41
886 1112 3.554934 TGTCTCCATTTTGCAGTCAGTT 58.445 40.909 0.00 0.00 0.00 3.16
923 1149 1.291877 GGGCGCTGTGGCTTATATCG 61.292 60.000 14.60 0.00 44.11 2.92
928 1154 2.801699 CGCTGTGGCTTATATCGGTTCA 60.802 50.000 0.00 0.00 36.09 3.18
933 1160 1.525619 GGCTTATATCGGTTCACGTGC 59.474 52.381 11.67 0.00 44.69 5.34
944 1172 3.707700 CACGTGCGCTTTACGGCA 61.708 61.111 20.73 0.00 45.24 5.69
948 1176 1.132640 GTGCGCTTTACGGCAGAAG 59.867 57.895 9.73 0.00 43.93 2.85
976 1204 5.759273 TGCATATTTATTGGCTGGATTTTGC 59.241 36.000 0.00 0.00 0.00 3.68
978 1206 6.484308 GCATATTTATTGGCTGGATTTTGCTT 59.516 34.615 0.00 0.00 0.00 3.91
979 1207 7.519328 GCATATTTATTGGCTGGATTTTGCTTG 60.519 37.037 0.00 0.00 0.00 4.01
998 1226 3.053831 TGTCTCCGAACTCCAAATTCC 57.946 47.619 0.00 0.00 0.00 3.01
1005 1233 3.504863 CGAACTCCAAATTCCAATGCTG 58.495 45.455 0.00 0.00 0.00 4.41
1043 1271 0.178947 CTCTCCCCGAGCTCCCTTAT 60.179 60.000 8.47 0.00 31.99 1.73
1051 1279 0.957362 GAGCTCCCTTATTGCCATGC 59.043 55.000 0.87 0.00 0.00 4.06
1059 1287 1.872952 CTTATTGCCATGCCGATTCGA 59.127 47.619 7.83 0.00 0.00 3.71
1125 1359 2.358898 GACATTGCCATTACGCTCCATT 59.641 45.455 0.00 0.00 0.00 3.16
1197 1431 1.488393 CCATCTCCCAAGAAGGTCTCC 59.512 57.143 0.00 0.00 35.95 3.71
1206 1440 2.495669 CAAGAAGGTCTCCTCTCCACTC 59.504 54.545 0.00 0.00 30.89 3.51
1207 1441 1.006639 AGAAGGTCTCCTCTCCACTCC 59.993 57.143 0.00 0.00 30.89 3.85
1208 1442 0.787084 AAGGTCTCCTCTCCACTCCA 59.213 55.000 0.00 0.00 30.89 3.86
1209 1443 0.040499 AGGTCTCCTCTCCACTCCAC 59.960 60.000 0.00 0.00 0.00 4.02
1210 1444 0.040499 GGTCTCCTCTCCACTCCACT 59.960 60.000 0.00 0.00 0.00 4.00
1211 1445 1.470051 GTCTCCTCTCCACTCCACTC 58.530 60.000 0.00 0.00 0.00 3.51
1217 1451 2.160205 CTCTCCACTCCACTCGTTACA 58.840 52.381 0.00 0.00 0.00 2.41
1256 1490 5.456265 GTCAAGAACCTGAATTTCTGCTTC 58.544 41.667 0.00 1.32 33.46 3.86
1318 1552 2.295885 GAAATGGAGGCAGTCATCCTG 58.704 52.381 0.00 0.00 44.53 3.86
1493 1733 8.373220 CGGTAACCCACCTCTCTTATTATTATT 58.627 37.037 0.00 0.00 46.19 1.40
1494 1734 9.722184 GGTAACCCACCTCTCTTATTATTATTC 57.278 37.037 0.00 0.00 44.79 1.75
1642 1937 0.031857 TTTTGGCCTGATGCAACACG 59.968 50.000 3.32 0.00 43.89 4.49
1648 1945 1.167851 CCTGATGCAACACGACCATT 58.832 50.000 0.00 0.00 0.00 3.16
1660 4674 3.628487 ACACGACCATTCTCTACTAGCTC 59.372 47.826 0.00 0.00 0.00 4.09
1673 4687 1.003442 TAGCTCACCCCATCCAGCT 59.997 57.895 0.00 0.00 44.50 4.24
1709 4724 6.989659 AGTCTTAGAACTCCAACATAACGAA 58.010 36.000 0.00 0.00 0.00 3.85
1730 4746 0.109342 AGGACAGCCTCAACACCTTG 59.891 55.000 0.00 0.00 42.19 3.61
1748 4764 5.700832 CACCTTGCAGTCAAACTAGTCAATA 59.299 40.000 0.00 0.00 0.00 1.90
1766 4782 0.242825 TACAGCGACCCTTTCTGACG 59.757 55.000 0.00 0.00 0.00 4.35
1769 4785 0.608640 AGCGACCCTTTCTGACGAAT 59.391 50.000 0.00 0.00 0.00 3.34
1838 4859 4.147321 AGCTTCAGTGAAACATCACCAAT 58.853 39.130 7.06 0.00 41.43 3.16
1843 4864 6.558771 TCAGTGAAACATCACCAATAACTG 57.441 37.500 5.40 0.00 41.43 3.16
1851 4872 4.397103 ACATCACCAATAACTGCAGACATG 59.603 41.667 23.35 12.98 0.00 3.21
1870 5300 7.492020 CAGACATGACCAATTGTTTTGAAGAAA 59.508 33.333 0.00 0.00 0.00 2.52
1893 5323 3.562557 TCGCTTCTTAAGAACAACCCAAC 59.437 43.478 13.99 0.00 0.00 3.77
1895 5325 3.889538 GCTTCTTAAGAACAACCCAACCT 59.110 43.478 13.99 0.00 0.00 3.50
1967 5399 9.555727 GGAATAATACTATTGGAACTTGCACTA 57.444 33.333 0.00 0.00 0.00 2.74
2024 5456 5.206587 AGCTGAAATCCCAGAAGCAATAAT 58.793 37.500 0.00 0.00 36.29 1.28
2032 5464 3.557595 CCCAGAAGCAATAATCTGACGTC 59.442 47.826 9.11 9.11 32.38 4.34
2033 5465 4.437239 CCAGAAGCAATAATCTGACGTCT 58.563 43.478 17.92 0.00 32.38 4.18
2104 7285 3.504906 CAGCCCCTATGCAACAGATAATG 59.495 47.826 0.00 0.00 0.00 1.90
2121 7302 9.429359 ACAGATAATGCTTACTGAATATGCTAC 57.571 33.333 0.00 0.00 35.45 3.58
2123 7304 9.650539 AGATAATGCTTACTGAATATGCTACTG 57.349 33.333 0.00 0.00 35.45 2.74
2124 7305 9.429359 GATAATGCTTACTGAATATGCTACTGT 57.571 33.333 0.00 0.00 35.45 3.55
2126 7307 5.359756 TGCTTACTGAATATGCTACTGTGG 58.640 41.667 0.00 0.00 35.45 4.17
2152 7336 4.466015 AGCAAGACAAAGGAAAACCTTGAA 59.534 37.500 0.00 0.00 34.57 2.69
2153 7337 5.046663 AGCAAGACAAAGGAAAACCTTGAAA 60.047 36.000 0.00 0.00 34.57 2.69
2173 7357 7.039722 TGAAACTAGGGGGAATTTTACTGAT 57.960 36.000 0.00 0.00 0.00 2.90
2272 7551 4.970662 TCACCGTACTACATAACTGACC 57.029 45.455 0.00 0.00 0.00 4.02
2285 7564 6.465084 ACATAACTGACCTAAAGAACTCCAC 58.535 40.000 0.00 0.00 0.00 4.02
2349 7629 3.181476 CCAACCAAAACCCTGAGTGAAAG 60.181 47.826 0.00 0.00 0.00 2.62
2381 7662 5.235516 ACTGTCCAATTCGTACTAAAGGTG 58.764 41.667 0.00 0.00 0.00 4.00
2475 7756 3.887716 AGCTTATTGGATTTAGCAGCAGG 59.112 43.478 0.00 0.00 36.11 4.85
2478 7759 5.506982 GCTTATTGGATTTAGCAGCAGGAAG 60.507 44.000 0.00 0.00 33.88 3.46
2486 7767 4.568072 TTAGCAGCAGGAAGTTATGGAA 57.432 40.909 0.00 0.00 0.00 3.53
2557 9390 8.462811 TGATACTGCAAACTTTCAAACTGTTTA 58.537 29.630 5.31 0.00 33.31 2.01
2586 9422 4.751767 TTTCCCTTTTTGTGCTGATTGT 57.248 36.364 0.00 0.00 0.00 2.71
2602 9438 4.338012 TGATTGTGACATGCCATCTCTTT 58.662 39.130 0.00 0.00 0.00 2.52
2617 9453 5.049818 CCATCTCTTTGTTGTCACTCACTTC 60.050 44.000 0.00 0.00 0.00 3.01
2941 9821 0.036732 GCAAGATCACCTGTCACCCA 59.963 55.000 0.00 0.00 0.00 4.51
3126 10006 8.766000 ACTTTGGTTCGTCAAAATAAAACTTT 57.234 26.923 0.00 0.00 36.37 2.66
3308 10188 8.687824 GCTTATGCTAGCAAGAACAATTTAAA 57.312 30.769 23.54 0.00 40.89 1.52
3924 10819 4.397382 CATGCCATATTTCTATGCGAACG 58.603 43.478 0.00 0.00 34.54 3.95
3926 10821 4.314961 TGCCATATTTCTATGCGAACGAT 58.685 39.130 0.00 0.00 34.54 3.73
3929 10824 6.255670 TGCCATATTTCTATGCGAACGATATC 59.744 38.462 0.00 0.00 34.54 1.63
3955 10854 7.271223 CCATGCTAGTGTGAAAAATAAAGTTCG 59.729 37.037 0.00 0.00 0.00 3.95
4134 11044 7.884877 TGGAGATCATAATGTTGGTGGATATTC 59.115 37.037 0.00 0.00 0.00 1.75
4220 11130 5.566774 GTCTCAAAGAATGAAGATTGTTGCG 59.433 40.000 0.00 0.00 37.67 4.85
4254 11164 4.320608 TTGGGTGCTTCTGATTCAAAAC 57.679 40.909 0.00 0.00 0.00 2.43
4309 11219 9.808808 TTTCGCATTTCACATTTTTATTTGATG 57.191 25.926 0.00 0.00 0.00 3.07
4511 11427 6.589523 GTCATATATGAGAATGTCCAGCTCAC 59.410 42.308 15.83 0.00 41.02 3.51
4591 11529 6.691388 GCGTTTCTGTGACAAAAGAAGTTATT 59.309 34.615 2.95 0.00 34.09 1.40
4635 11573 9.113838 TCATTCTTCTTAATCATGTCTTAAGGC 57.886 33.333 20.43 0.00 37.00 4.35
4664 11602 5.743636 TTAAGAATTTCATTGCCCAGCTT 57.256 34.783 0.00 0.00 0.00 3.74
4721 11659 2.233431 TGTTGTGCTGTCCTTTTGCTTT 59.767 40.909 0.00 0.00 0.00 3.51
4729 11671 3.290710 TGTCCTTTTGCTTTCTCTGCTT 58.709 40.909 0.00 0.00 0.00 3.91
4730 11672 3.701040 TGTCCTTTTGCTTTCTCTGCTTT 59.299 39.130 0.00 0.00 0.00 3.51
4760 11703 9.959749 TTTTGTGTTTTCTTTGTCCAGTATATC 57.040 29.630 0.00 0.00 0.00 1.63
4786 11729 7.961325 TTTTTCTGCAATGTTTTATCCCTTC 57.039 32.000 0.00 0.00 0.00 3.46
4884 11827 0.393537 AGCAAGCAGGCAGGATGTAC 60.394 55.000 2.37 0.00 39.31 2.90
5053 12004 2.363680 ACTGCTCATCCTTCCATAGTCG 59.636 50.000 0.00 0.00 0.00 4.18
5064 12015 1.604278 TCCATAGTCGATCAGCTCACG 59.396 52.381 0.00 0.00 0.00 4.35
5121 12072 5.770663 TGACGGAAATTTGATTACTGGGAAA 59.229 36.000 0.00 0.00 0.00 3.13
5251 12207 1.032114 AAACGCCTAGCATTCCTGGC 61.032 55.000 0.00 0.00 41.76 4.85
5262 12218 1.475280 CATTCCTGGCACAATGGAGTG 59.525 52.381 2.38 2.38 38.70 3.51
5266 12222 1.615116 CCTGGCACAATGGAGTGATGT 60.615 52.381 0.00 0.00 42.05 3.06
5287 12243 4.022416 TGTGCTGAATGTTTGGTTATGGTC 60.022 41.667 0.00 0.00 0.00 4.02
5328 12284 6.072452 AGCTATGCTCAAACTTTTAAGTGACC 60.072 38.462 0.00 0.00 34.58 4.02
5339 12295 4.931661 TTTAAGTGACCGTCTCTCTTGT 57.068 40.909 3.65 0.00 35.00 3.16
5418 12374 6.942005 AGTGAAATGTCCACTGAATATGTTGA 59.058 34.615 0.00 0.00 42.68 3.18
5448 12404 2.029110 ACAACTGCATTGGGAAAATCCG 60.029 45.455 11.76 0.00 43.20 4.18
5464 12420 1.599797 CCGGTTGGGGTCAGTTCAC 60.600 63.158 0.00 0.00 0.00 3.18
5465 12421 1.959226 CGGTTGGGGTCAGTTCACG 60.959 63.158 0.00 0.00 0.00 4.35
5482 12438 1.057822 CGTCAAGATGTTCTGCGCG 59.942 57.895 0.00 0.00 0.00 6.86
5526 12485 1.657594 CACGTGCTCTATCTGTGCTTG 59.342 52.381 0.82 0.00 36.27 4.01
5531 12490 1.809651 GCTCTATCTGTGCTTGGAGGC 60.810 57.143 0.00 0.00 32.89 4.70
5533 12492 0.543277 CTATCTGTGCTTGGAGGCCA 59.457 55.000 5.01 0.00 0.00 5.36
5535 12494 1.495579 ATCTGTGCTTGGAGGCCACT 61.496 55.000 5.01 0.00 30.78 4.00
5546 12511 4.787735 GGCCACTGAGGACCTCTA 57.212 61.111 22.14 8.09 40.85 2.43
5547 12512 2.992476 GGCCACTGAGGACCTCTAA 58.008 57.895 22.14 2.10 40.85 2.10
5577 12542 1.293498 CTCCAAGTACGGCAGCAGT 59.707 57.895 2.95 2.95 0.00 4.40
5597 12564 0.867746 GTCATGCACGAGTTTGCTGA 59.132 50.000 0.00 0.00 43.41 4.26
5604 12571 1.569493 CGAGTTTGCTGAACCCGTG 59.431 57.895 0.69 0.00 39.13 4.94
5607 12574 2.124109 TTTGCTGAACCCGTGGCA 60.124 55.556 0.00 0.00 0.00 4.92
5609 12576 2.616797 TTTGCTGAACCCGTGGCAGA 62.617 55.000 0.00 0.00 36.06 4.26
5631 12598 3.848846 CAGCATGTGACGACATATGAC 57.151 47.619 23.90 16.00 44.56 3.06
5632 12599 3.189285 CAGCATGTGACGACATATGACA 58.811 45.455 23.90 3.02 44.56 3.58
5633 12600 3.805971 CAGCATGTGACGACATATGACAT 59.194 43.478 23.90 5.45 44.56 3.06
5634 12601 4.984161 CAGCATGTGACGACATATGACATA 59.016 41.667 23.90 0.00 44.56 2.29
5635 12602 5.636543 CAGCATGTGACGACATATGACATAT 59.363 40.000 23.90 1.87 44.56 1.78
5641 12608 4.082245 TGACGACATATGACATATCGGCAT 60.082 41.667 18.68 2.01 29.01 4.40
5649 12621 5.885230 ATGACATATCGGCATTATGTTGG 57.115 39.130 9.80 0.00 39.70 3.77
5676 12648 6.883744 AGTTTATTTTCAACTTCTGGGCAAA 58.116 32.000 0.00 0.00 29.75 3.68
5677 12649 7.334858 AGTTTATTTTCAACTTCTGGGCAAAA 58.665 30.769 0.00 0.00 29.75 2.44
5706 12678 6.293407 GCTTGCGTATGCTTTCCTGAATATTA 60.293 38.462 8.69 0.00 43.34 0.98
5736 12709 4.265893 TGACCCGCAAACATACAATACAT 58.734 39.130 0.00 0.00 0.00 2.29
5765 12738 8.534496 AGCAAAAATAGATCCATAAAACTGCTT 58.466 29.630 0.00 0.00 30.10 3.91
5776 12749 7.471721 TCCATAAAACTGCTTATCGTTTGATG 58.528 34.615 0.00 0.00 39.82 3.07
5779 12752 9.767684 CATAAAACTGCTTATCGTTTGATGTTA 57.232 29.630 0.00 0.00 37.27 2.41
5785 12758 7.172532 ACTGCTTATCGTTTGATGTTACTTTGA 59.827 33.333 0.00 0.00 35.99 2.69
5807 12787 8.550710 TTGATGCTTGCTTATAATTTTGCTTT 57.449 26.923 0.00 0.00 0.00 3.51
5843 12826 7.810658 AGTTTATGTTATGTTTGCTGTCAGAG 58.189 34.615 3.32 0.00 0.00 3.35
5846 12829 5.422666 TGTTATGTTTGCTGTCAGAGTTG 57.577 39.130 3.32 0.00 0.00 3.16
5853 12836 0.807496 GCTGTCAGAGTTGGGCAATC 59.193 55.000 3.32 0.00 0.00 2.67
5854 12837 1.612726 GCTGTCAGAGTTGGGCAATCT 60.613 52.381 3.32 0.00 0.00 2.40
5855 12838 2.082231 CTGTCAGAGTTGGGCAATCTG 58.918 52.381 0.00 0.00 41.47 2.90
5856 12839 0.807496 GTCAGAGTTGGGCAATCTGC 59.193 55.000 0.00 0.00 44.08 4.26
5867 12850 2.766345 GCAATCTGCCAAAAATGGGA 57.234 45.000 0.00 0.00 37.42 4.37
5869 12852 2.027837 GCAATCTGCCAAAAATGGGAGT 60.028 45.455 14.80 1.91 45.98 3.85
5870 12853 3.195396 GCAATCTGCCAAAAATGGGAGTA 59.805 43.478 14.80 4.19 45.98 2.59
5871 12854 4.141869 GCAATCTGCCAAAAATGGGAGTAT 60.142 41.667 14.80 6.05 45.98 2.12
5872 12855 5.627503 GCAATCTGCCAAAAATGGGAGTATT 60.628 40.000 14.80 10.68 45.98 1.89
5873 12856 5.859205 ATCTGCCAAAAATGGGAGTATTC 57.141 39.130 14.80 0.00 45.98 1.75
5874 12857 4.671831 TCTGCCAAAAATGGGAGTATTCA 58.328 39.130 14.80 0.00 45.98 2.57
5875 12858 4.706476 TCTGCCAAAAATGGGAGTATTCAG 59.294 41.667 14.80 3.79 45.98 3.02
5876 12859 4.671831 TGCCAAAAATGGGAGTATTCAGA 58.328 39.130 0.00 0.00 0.00 3.27
5877 12860 4.706476 TGCCAAAAATGGGAGTATTCAGAG 59.294 41.667 0.00 0.00 0.00 3.35
5878 12861 4.949856 GCCAAAAATGGGAGTATTCAGAGA 59.050 41.667 0.00 0.00 0.00 3.10
5879 12862 5.418840 GCCAAAAATGGGAGTATTCAGAGAA 59.581 40.000 0.00 0.00 0.00 2.87
5880 12863 6.071391 GCCAAAAATGGGAGTATTCAGAGAAA 60.071 38.462 0.00 0.00 0.00 2.52
5881 12864 7.525360 GCCAAAAATGGGAGTATTCAGAGAAAA 60.525 37.037 0.00 0.00 0.00 2.29
5882 12865 8.367156 CCAAAAATGGGAGTATTCAGAGAAAAA 58.633 33.333 0.00 0.00 0.00 1.94
5923 12906 4.080975 ACAATTTGGTAATGCATCTTGGGG 60.081 41.667 0.00 0.00 0.00 4.96
5925 12908 0.334335 TGGTAATGCATCTTGGGGCA 59.666 50.000 0.00 0.00 45.23 5.36
5926 12909 1.272928 TGGTAATGCATCTTGGGGCAA 60.273 47.619 0.00 0.00 44.20 4.52
5927 12910 1.136891 GGTAATGCATCTTGGGGCAAC 59.863 52.381 0.00 0.00 44.20 4.17
5929 12912 0.899717 AATGCATCTTGGGGCAACGT 60.900 50.000 0.00 0.00 44.20 3.99
5947 12931 5.985781 CAACGTTTCTGTTGCTACAATAGT 58.014 37.500 0.00 0.00 42.34 2.12
5958 12942 8.834749 TGTTGCTACAATAGTACATACAACAA 57.165 30.769 0.00 0.00 41.12 2.83
5959 12943 9.274206 TGTTGCTACAATAGTACATACAACAAA 57.726 29.630 0.00 0.00 41.12 2.83
5962 12946 8.723311 TGCTACAATAGTACATACAACAAAACC 58.277 33.333 0.00 0.00 0.00 3.27
5963 12947 8.943002 GCTACAATAGTACATACAACAAAACCT 58.057 33.333 0.00 0.00 0.00 3.50
5972 12956 7.440523 ACATACAACAAAACCTTTGCAAAAA 57.559 28.000 13.84 0.00 0.00 1.94
6009 12993 2.234661 CCAAGTCTCTGTAGCATGGACA 59.765 50.000 0.00 0.00 0.00 4.02
6010 12994 3.257393 CAAGTCTCTGTAGCATGGACAC 58.743 50.000 0.00 0.00 0.00 3.67
6011 12995 2.813907 AGTCTCTGTAGCATGGACACT 58.186 47.619 0.00 0.00 0.00 3.55
6012 12996 2.757868 AGTCTCTGTAGCATGGACACTC 59.242 50.000 0.00 0.00 0.00 3.51
6013 12997 2.103373 TCTCTGTAGCATGGACACTCC 58.897 52.381 0.00 0.00 36.96 3.85
6014 12998 1.137872 CTCTGTAGCATGGACACTCCC 59.862 57.143 0.00 0.00 35.03 4.30
6015 12999 0.904649 CTGTAGCATGGACACTCCCA 59.095 55.000 0.00 0.00 41.05 4.37
6016 13000 0.904649 TGTAGCATGGACACTCCCAG 59.095 55.000 0.00 0.00 39.97 4.45
6017 13001 0.179000 GTAGCATGGACACTCCCAGG 59.821 60.000 0.00 0.00 39.97 4.45
6018 13002 0.982852 TAGCATGGACACTCCCAGGG 60.983 60.000 0.00 0.00 39.97 4.45
6019 13003 2.300967 GCATGGACACTCCCAGGGA 61.301 63.158 8.35 8.35 39.97 4.20
6020 13004 1.639635 GCATGGACACTCCCAGGGAT 61.640 60.000 9.31 0.00 39.97 3.85
6021 13005 1.806496 CATGGACACTCCCAGGGATA 58.194 55.000 9.31 0.00 39.97 2.59
6022 13006 2.126882 CATGGACACTCCCAGGGATAA 58.873 52.381 9.31 0.00 39.97 1.75
6023 13007 2.587060 TGGACACTCCCAGGGATAAT 57.413 50.000 9.31 0.00 35.03 1.28
6024 13008 2.126882 TGGACACTCCCAGGGATAATG 58.873 52.381 9.31 10.70 35.03 1.90
6025 13009 2.127708 GGACACTCCCAGGGATAATGT 58.872 52.381 9.31 14.03 0.00 2.71
6026 13010 2.509964 GGACACTCCCAGGGATAATGTT 59.490 50.000 9.31 0.00 0.00 2.71
6027 13011 3.433740 GGACACTCCCAGGGATAATGTTC 60.434 52.174 9.31 9.33 0.00 3.18
6028 13012 2.170607 ACACTCCCAGGGATAATGTTCG 59.829 50.000 9.31 0.00 0.00 3.95
6029 13013 1.141053 ACTCCCAGGGATAATGTTCGC 59.859 52.381 9.31 0.00 0.00 4.70
6030 13014 1.417890 CTCCCAGGGATAATGTTCGCT 59.582 52.381 9.31 0.00 39.27 4.93
6031 13015 1.843851 TCCCAGGGATAATGTTCGCTT 59.156 47.619 3.01 0.00 36.84 4.68
6032 13016 1.949525 CCCAGGGATAATGTTCGCTTG 59.050 52.381 0.00 0.00 36.84 4.01
6033 13017 1.949525 CCAGGGATAATGTTCGCTTGG 59.050 52.381 0.00 0.00 36.84 3.61
6034 13018 2.643551 CAGGGATAATGTTCGCTTGGT 58.356 47.619 0.00 0.00 36.84 3.67
6035 13019 2.355756 CAGGGATAATGTTCGCTTGGTG 59.644 50.000 0.00 0.00 36.84 4.17
6036 13020 1.065551 GGGATAATGTTCGCTTGGTGC 59.934 52.381 0.00 0.00 38.57 5.01
6037 13021 2.017049 GGATAATGTTCGCTTGGTGCT 58.983 47.619 0.00 0.00 40.11 4.40
6038 13022 2.223340 GGATAATGTTCGCTTGGTGCTG 60.223 50.000 0.00 0.00 40.11 4.41
6039 13023 2.177394 TAATGTTCGCTTGGTGCTGA 57.823 45.000 0.00 0.00 40.11 4.26
6040 13024 1.317613 AATGTTCGCTTGGTGCTGAA 58.682 45.000 0.00 0.00 40.11 3.02
6041 13025 0.877071 ATGTTCGCTTGGTGCTGAAG 59.123 50.000 0.00 0.00 40.11 3.02
6042 13026 0.463654 TGTTCGCTTGGTGCTGAAGT 60.464 50.000 0.00 0.00 40.11 3.01
6043 13027 0.663153 GTTCGCTTGGTGCTGAAGTT 59.337 50.000 0.00 0.00 40.11 2.66
6044 13028 1.065551 GTTCGCTTGGTGCTGAAGTTT 59.934 47.619 0.00 0.00 40.11 2.66
6045 13029 0.662619 TCGCTTGGTGCTGAAGTTTG 59.337 50.000 0.00 0.00 40.11 2.93
6046 13030 0.381801 CGCTTGGTGCTGAAGTTTGT 59.618 50.000 0.00 0.00 40.11 2.83
6047 13031 1.601903 CGCTTGGTGCTGAAGTTTGTA 59.398 47.619 0.00 0.00 40.11 2.41
6048 13032 2.032799 CGCTTGGTGCTGAAGTTTGTAA 59.967 45.455 0.00 0.00 40.11 2.41
6049 13033 3.304659 CGCTTGGTGCTGAAGTTTGTAAT 60.305 43.478 0.00 0.00 40.11 1.89
6050 13034 4.620982 GCTTGGTGCTGAAGTTTGTAATT 58.379 39.130 0.00 0.00 38.95 1.40
6051 13035 5.049828 GCTTGGTGCTGAAGTTTGTAATTT 58.950 37.500 0.00 0.00 38.95 1.82
6052 13036 5.050837 GCTTGGTGCTGAAGTTTGTAATTTG 60.051 40.000 0.00 0.00 38.95 2.32
6053 13037 4.367450 TGGTGCTGAAGTTTGTAATTTGC 58.633 39.130 0.00 0.00 0.00 3.68
6054 13038 4.142071 TGGTGCTGAAGTTTGTAATTTGCA 60.142 37.500 0.00 0.00 0.00 4.08
6055 13039 4.445385 GGTGCTGAAGTTTGTAATTTGCAG 59.555 41.667 0.00 0.00 0.00 4.41
6056 13040 4.445385 GTGCTGAAGTTTGTAATTTGCAGG 59.555 41.667 0.00 0.00 0.00 4.85
6057 13041 3.989817 GCTGAAGTTTGTAATTTGCAGGG 59.010 43.478 0.00 0.00 0.00 4.45
6058 13042 4.501400 GCTGAAGTTTGTAATTTGCAGGGT 60.501 41.667 0.00 0.00 0.00 4.34
6059 13043 5.278758 GCTGAAGTTTGTAATTTGCAGGGTA 60.279 40.000 0.00 0.00 0.00 3.69
6060 13044 6.079424 TGAAGTTTGTAATTTGCAGGGTAC 57.921 37.500 0.00 0.00 0.00 3.34
6061 13045 5.830991 TGAAGTTTGTAATTTGCAGGGTACT 59.169 36.000 0.00 0.00 0.00 2.73
6062 13046 6.322712 TGAAGTTTGTAATTTGCAGGGTACTT 59.677 34.615 0.00 0.00 0.00 2.24
6063 13047 6.724893 AGTTTGTAATTTGCAGGGTACTTT 57.275 33.333 0.00 0.00 0.00 2.66
6064 13048 7.826918 AGTTTGTAATTTGCAGGGTACTTTA 57.173 32.000 0.00 0.00 0.00 1.85
6065 13049 7.882179 AGTTTGTAATTTGCAGGGTACTTTAG 58.118 34.615 0.00 0.00 0.00 1.85
6066 13050 7.722285 AGTTTGTAATTTGCAGGGTACTTTAGA 59.278 33.333 0.00 0.00 0.00 2.10
6067 13051 8.354426 GTTTGTAATTTGCAGGGTACTTTAGAA 58.646 33.333 0.00 0.00 0.00 2.10
6068 13052 7.443259 TGTAATTTGCAGGGTACTTTAGAAC 57.557 36.000 0.00 0.00 0.00 3.01
6069 13053 6.999272 TGTAATTTGCAGGGTACTTTAGAACA 59.001 34.615 0.00 0.00 0.00 3.18
6070 13054 5.959618 ATTTGCAGGGTACTTTAGAACAC 57.040 39.130 0.00 0.00 0.00 3.32
6071 13055 3.412237 TGCAGGGTACTTTAGAACACC 57.588 47.619 0.00 0.00 0.00 4.16
6072 13056 2.706723 TGCAGGGTACTTTAGAACACCA 59.293 45.455 0.00 0.00 32.42 4.17
6073 13057 3.072211 GCAGGGTACTTTAGAACACCAC 58.928 50.000 0.00 0.00 32.42 4.16
6074 13058 3.495453 GCAGGGTACTTTAGAACACCACA 60.495 47.826 0.00 0.00 32.42 4.17
6075 13059 4.710324 CAGGGTACTTTAGAACACCACAA 58.290 43.478 0.00 0.00 32.42 3.33
6076 13060 4.755123 CAGGGTACTTTAGAACACCACAAG 59.245 45.833 0.00 0.00 32.42 3.16
6077 13061 3.501062 GGGTACTTTAGAACACCACAAGC 59.499 47.826 0.00 0.00 32.42 4.01
6078 13062 4.131596 GGTACTTTAGAACACCACAAGCA 58.868 43.478 0.00 0.00 0.00 3.91
6079 13063 4.213482 GGTACTTTAGAACACCACAAGCAG 59.787 45.833 0.00 0.00 0.00 4.24
6080 13064 2.618709 ACTTTAGAACACCACAAGCAGC 59.381 45.455 0.00 0.00 0.00 5.25
6081 13065 2.638480 TTAGAACACCACAAGCAGCT 57.362 45.000 0.00 0.00 0.00 4.24
6082 13066 2.638480 TAGAACACCACAAGCAGCTT 57.362 45.000 0.21 0.21 0.00 3.74
6083 13067 1.767759 AGAACACCACAAGCAGCTTT 58.232 45.000 4.38 0.00 0.00 3.51
6084 13068 2.102578 AGAACACCACAAGCAGCTTTT 58.897 42.857 4.38 0.00 0.00 2.27
6085 13069 2.099756 AGAACACCACAAGCAGCTTTTC 59.900 45.455 4.38 5.91 0.00 2.29
6086 13070 1.767759 ACACCACAAGCAGCTTTTCT 58.232 45.000 4.38 0.00 0.00 2.52
6087 13071 1.406539 ACACCACAAGCAGCTTTTCTG 59.593 47.619 4.38 0.00 45.62 3.02
6088 13072 1.406539 CACCACAAGCAGCTTTTCTGT 59.593 47.619 4.38 0.00 44.66 3.41
6089 13073 1.678101 ACCACAAGCAGCTTTTCTGTC 59.322 47.619 4.38 0.00 44.66 3.51
6090 13074 1.952296 CCACAAGCAGCTTTTCTGTCT 59.048 47.619 4.38 0.00 44.66 3.41
6091 13075 2.287427 CCACAAGCAGCTTTTCTGTCTG 60.287 50.000 4.38 0.00 44.66 3.51
6092 13076 2.615447 CACAAGCAGCTTTTCTGTCTGA 59.385 45.455 4.38 0.00 44.66 3.27
6093 13077 3.252701 CACAAGCAGCTTTTCTGTCTGAT 59.747 43.478 4.38 0.00 44.66 2.90
6094 13078 4.453478 CACAAGCAGCTTTTCTGTCTGATA 59.547 41.667 4.38 0.00 44.66 2.15
6095 13079 4.694509 ACAAGCAGCTTTTCTGTCTGATAG 59.305 41.667 4.38 0.00 44.66 2.08
6096 13080 4.815533 AGCAGCTTTTCTGTCTGATAGA 57.184 40.909 0.00 0.00 44.66 1.98
6097 13081 5.356291 AGCAGCTTTTCTGTCTGATAGAT 57.644 39.130 4.90 0.00 44.66 1.98
6098 13082 5.358922 AGCAGCTTTTCTGTCTGATAGATC 58.641 41.667 4.90 0.00 44.66 2.75
6099 13083 4.511082 GCAGCTTTTCTGTCTGATAGATCC 59.489 45.833 4.90 0.00 44.66 3.36
6100 13084 5.668471 CAGCTTTTCTGTCTGATAGATCCA 58.332 41.667 4.90 0.00 38.02 3.41
6101 13085 6.111382 CAGCTTTTCTGTCTGATAGATCCAA 58.889 40.000 4.90 0.00 38.02 3.53
6102 13086 6.036953 CAGCTTTTCTGTCTGATAGATCCAAC 59.963 42.308 4.90 0.00 38.02 3.77
6103 13087 6.070309 AGCTTTTCTGTCTGATAGATCCAACT 60.070 38.462 4.90 0.00 0.00 3.16
6104 13088 6.036953 GCTTTTCTGTCTGATAGATCCAACTG 59.963 42.308 4.90 0.00 0.00 3.16
6105 13089 6.857437 TTTCTGTCTGATAGATCCAACTGA 57.143 37.500 4.90 0.00 0.00 3.41
6106 13090 7.429374 TTTCTGTCTGATAGATCCAACTGAT 57.571 36.000 4.90 0.00 36.01 2.90
6107 13091 8.539117 TTTCTGTCTGATAGATCCAACTGATA 57.461 34.615 4.90 0.00 32.41 2.15
6108 13092 8.539117 TTCTGTCTGATAGATCCAACTGATAA 57.461 34.615 4.90 0.00 32.41 1.75
6109 13093 8.539117 TCTGTCTGATAGATCCAACTGATAAA 57.461 34.615 0.00 0.00 32.41 1.40
6110 13094 9.152327 TCTGTCTGATAGATCCAACTGATAAAT 57.848 33.333 0.00 0.00 32.41 1.40
6111 13095 9.205719 CTGTCTGATAGATCCAACTGATAAATG 57.794 37.037 0.00 0.00 32.41 2.32
6112 13096 8.708378 TGTCTGATAGATCCAACTGATAAATGT 58.292 33.333 0.00 0.00 32.41 2.71
6113 13097 8.986847 GTCTGATAGATCCAACTGATAAATGTG 58.013 37.037 0.00 0.00 32.41 3.21
6114 13098 8.152898 TCTGATAGATCCAACTGATAAATGTGG 58.847 37.037 0.00 0.00 32.41 4.17
6115 13099 6.712095 TGATAGATCCAACTGATAAATGTGGC 59.288 38.462 0.00 0.00 32.41 5.01
6116 13100 4.858850 AGATCCAACTGATAAATGTGGCA 58.141 39.130 0.00 0.00 32.41 4.92
6117 13101 4.885907 AGATCCAACTGATAAATGTGGCAG 59.114 41.667 0.00 0.00 32.41 4.85
6118 13102 2.754552 TCCAACTGATAAATGTGGCAGC 59.245 45.455 0.00 0.00 31.74 5.25
6119 13103 2.159198 CCAACTGATAAATGTGGCAGCC 60.159 50.000 3.66 3.66 31.74 4.85
6120 13104 1.767759 ACTGATAAATGTGGCAGCCC 58.232 50.000 9.64 0.29 31.74 5.19
6121 13105 0.664761 CTGATAAATGTGGCAGCCCG 59.335 55.000 9.64 0.00 0.00 6.13
6122 13106 0.751277 TGATAAATGTGGCAGCCCGG 60.751 55.000 9.64 0.00 0.00 5.73
6123 13107 2.075426 GATAAATGTGGCAGCCCGGC 62.075 60.000 9.64 0.00 41.67 6.13
6124 13108 2.572333 ATAAATGTGGCAGCCCGGCT 62.572 55.000 9.64 5.94 40.77 5.52
6125 13109 2.779742 TAAATGTGGCAGCCCGGCTT 62.780 55.000 9.99 0.00 36.40 4.35
6126 13110 4.684134 ATGTGGCAGCCCGGCTTT 62.684 61.111 9.99 0.00 36.40 3.51
6127 13111 4.912395 TGTGGCAGCCCGGCTTTT 62.912 61.111 9.99 0.00 36.40 2.27
6128 13112 3.615709 GTGGCAGCCCGGCTTTTT 61.616 61.111 9.99 0.00 36.40 1.94
6129 13113 2.116340 TGGCAGCCCGGCTTTTTA 59.884 55.556 9.99 0.00 36.40 1.52
6130 13114 2.272447 TGGCAGCCCGGCTTTTTAC 61.272 57.895 9.99 0.00 36.40 2.01
6131 13115 2.178273 GCAGCCCGGCTTTTTACG 59.822 61.111 9.99 0.00 36.40 3.18
6132 13116 2.178273 CAGCCCGGCTTTTTACGC 59.822 61.111 9.99 0.00 36.40 4.42
6133 13117 3.428282 AGCCCGGCTTTTTACGCG 61.428 61.111 5.94 3.53 33.89 6.01
6135 13119 4.804725 CCCGGCTTTTTACGCGCG 62.805 66.667 30.96 30.96 0.00 6.86
6136 13120 3.780082 CCGGCTTTTTACGCGCGA 61.780 61.111 39.36 17.83 0.00 5.87
6137 13121 2.171462 CGGCTTTTTACGCGCGAA 59.829 55.556 39.36 22.85 0.00 4.70
6138 13122 2.135591 CGGCTTTTTACGCGCGAAC 61.136 57.895 39.36 15.96 0.00 3.95
6139 13123 1.205820 GGCTTTTTACGCGCGAACT 59.794 52.632 39.36 17.79 0.00 3.01
6140 13124 0.385098 GGCTTTTTACGCGCGAACTT 60.385 50.000 39.36 17.35 0.00 2.66
6141 13125 1.391787 GCTTTTTACGCGCGAACTTT 58.608 45.000 39.36 16.91 0.00 2.66
6142 13126 1.776897 GCTTTTTACGCGCGAACTTTT 59.223 42.857 39.36 16.04 0.00 2.27
6143 13127 2.214690 GCTTTTTACGCGCGAACTTTTT 59.785 40.909 39.36 15.18 0.00 1.94
6144 13128 3.418294 GCTTTTTACGCGCGAACTTTTTA 59.582 39.130 39.36 13.96 0.00 1.52
6145 13129 4.086176 GCTTTTTACGCGCGAACTTTTTAA 60.086 37.500 39.36 19.51 0.00 1.52
6146 13130 5.552288 GCTTTTTACGCGCGAACTTTTTAAA 60.552 36.000 39.36 24.11 0.00 1.52
6147 13131 6.493697 TTTTTACGCGCGAACTTTTTAAAT 57.506 29.167 39.36 12.01 0.00 1.40
6148 13132 5.468729 TTTACGCGCGAACTTTTTAAATG 57.531 34.783 39.36 1.45 0.00 2.32
6149 13133 2.989641 ACGCGCGAACTTTTTAAATGT 58.010 38.095 39.36 5.15 0.00 2.71
6150 13134 2.717011 ACGCGCGAACTTTTTAAATGTG 59.283 40.909 39.36 0.21 0.00 3.21
6151 13135 2.088360 CGCGCGAACTTTTTAAATGTGG 59.912 45.455 28.94 0.00 0.00 4.17
6152 13136 3.301706 GCGCGAACTTTTTAAATGTGGA 58.698 40.909 12.10 0.00 0.00 4.02
6153 13137 3.731717 GCGCGAACTTTTTAAATGTGGAA 59.268 39.130 12.10 0.00 0.00 3.53
6154 13138 4.143618 GCGCGAACTTTTTAAATGTGGAAG 60.144 41.667 12.10 0.00 0.00 3.46
6155 13139 5.209240 CGCGAACTTTTTAAATGTGGAAGA 58.791 37.500 0.00 0.00 0.00 2.87
6156 13140 5.683743 CGCGAACTTTTTAAATGTGGAAGAA 59.316 36.000 0.00 0.00 0.00 2.52
6157 13141 6.362283 CGCGAACTTTTTAAATGTGGAAGAAT 59.638 34.615 0.00 0.00 0.00 2.40
6158 13142 7.535940 CGCGAACTTTTTAAATGTGGAAGAATA 59.464 33.333 0.00 0.00 0.00 1.75
6159 13143 9.353999 GCGAACTTTTTAAATGTGGAAGAATAT 57.646 29.630 4.07 0.00 0.00 1.28
6181 13165 4.752661 TTTTTACATAGTGCACGGGAAC 57.247 40.909 12.01 0.00 0.00 3.62
6182 13166 3.404224 TTTACATAGTGCACGGGAACA 57.596 42.857 12.01 0.00 0.00 3.18
6183 13167 3.620427 TTACATAGTGCACGGGAACAT 57.380 42.857 12.01 0.00 0.00 2.71
6184 13168 2.489938 ACATAGTGCACGGGAACATT 57.510 45.000 12.01 0.00 0.00 2.71
6185 13169 2.790433 ACATAGTGCACGGGAACATTT 58.210 42.857 12.01 0.00 0.00 2.32
6186 13170 3.153919 ACATAGTGCACGGGAACATTTT 58.846 40.909 12.01 0.00 0.00 1.82
6187 13171 3.572255 ACATAGTGCACGGGAACATTTTT 59.428 39.130 12.01 0.00 0.00 1.94
6212 13196 9.676195 TTTACACAGTTTGTCACAATATTCATG 57.324 29.630 0.00 0.00 39.91 3.07
6213 13197 7.275888 ACACAGTTTGTCACAATATTCATGT 57.724 32.000 0.00 0.00 29.79 3.21
6214 13198 7.715657 ACACAGTTTGTCACAATATTCATGTT 58.284 30.769 0.00 0.00 29.79 2.71
6215 13199 8.196771 ACACAGTTTGTCACAATATTCATGTTT 58.803 29.630 0.00 0.00 29.79 2.83
6216 13200 9.033481 CACAGTTTGTCACAATATTCATGTTTT 57.967 29.630 0.00 0.00 0.00 2.43
6217 13201 9.598517 ACAGTTTGTCACAATATTCATGTTTTT 57.401 25.926 0.00 0.00 0.00 1.94
6241 13225 9.844790 TTTTCTTTATTGACACTATTCATGCTG 57.155 29.630 0.00 0.00 0.00 4.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 0.515127 TTACGACAAATGGCACGCTG 59.485 50.000 0.00 0.00 0.00 5.18
3 4 0.515564 GTTACGACAAATGGCACGCT 59.484 50.000 0.00 0.00 0.00 5.07
4 5 0.453782 GGTTACGACAAATGGCACGC 60.454 55.000 0.00 0.00 0.00 5.34
6 7 2.147958 TCAGGTTACGACAAATGGCAC 58.852 47.619 0.00 0.00 0.00 5.01
7 8 2.422597 CTCAGGTTACGACAAATGGCA 58.577 47.619 0.00 0.00 0.00 4.92
9 10 3.056107 TCTCCTCAGGTTACGACAAATGG 60.056 47.826 0.00 0.00 0.00 3.16
10 11 4.188247 TCTCCTCAGGTTACGACAAATG 57.812 45.455 0.00 0.00 0.00 2.32
11 12 4.383118 CCATCTCCTCAGGTTACGACAAAT 60.383 45.833 0.00 0.00 0.00 2.32
12 13 3.056107 CCATCTCCTCAGGTTACGACAAA 60.056 47.826 0.00 0.00 0.00 2.83
13 14 2.496070 CCATCTCCTCAGGTTACGACAA 59.504 50.000 0.00 0.00 0.00 3.18
14 15 2.100197 CCATCTCCTCAGGTTACGACA 58.900 52.381 0.00 0.00 0.00 4.35
15 16 1.409427 CCCATCTCCTCAGGTTACGAC 59.591 57.143 0.00 0.00 0.00 4.34
16 17 1.286849 TCCCATCTCCTCAGGTTACGA 59.713 52.381 0.00 0.00 0.00 3.43
17 18 1.683917 CTCCCATCTCCTCAGGTTACG 59.316 57.143 0.00 0.00 0.00 3.18
18 19 2.432510 CACTCCCATCTCCTCAGGTTAC 59.567 54.545 0.00 0.00 0.00 2.50
19 20 2.314852 TCACTCCCATCTCCTCAGGTTA 59.685 50.000 0.00 0.00 0.00 2.85
20 21 1.079490 TCACTCCCATCTCCTCAGGTT 59.921 52.381 0.00 0.00 0.00 3.50
21 22 0.712979 TCACTCCCATCTCCTCAGGT 59.287 55.000 0.00 0.00 0.00 4.00
22 23 1.969923 GATCACTCCCATCTCCTCAGG 59.030 57.143 0.00 0.00 0.00 3.86
23 24 2.961510 AGATCACTCCCATCTCCTCAG 58.038 52.381 0.00 0.00 0.00 3.35
24 25 3.411454 AAGATCACTCCCATCTCCTCA 57.589 47.619 0.00 0.00 29.82 3.86
25 26 3.181456 CCAAAGATCACTCCCATCTCCTC 60.181 52.174 0.00 0.00 29.82 3.71
26 27 2.776536 CCAAAGATCACTCCCATCTCCT 59.223 50.000 0.00 0.00 29.82 3.69
27 28 2.774234 TCCAAAGATCACTCCCATCTCC 59.226 50.000 0.00 0.00 29.82 3.71
28 29 3.743899 GCTCCAAAGATCACTCCCATCTC 60.744 52.174 0.00 0.00 29.82 2.75
29 30 2.172293 GCTCCAAAGATCACTCCCATCT 59.828 50.000 0.00 0.00 31.51 2.90
30 31 2.570135 GCTCCAAAGATCACTCCCATC 58.430 52.381 0.00 0.00 0.00 3.51
31 32 1.134280 CGCTCCAAAGATCACTCCCAT 60.134 52.381 0.00 0.00 0.00 4.00
32 33 0.250234 CGCTCCAAAGATCACTCCCA 59.750 55.000 0.00 0.00 0.00 4.37
33 34 0.537188 TCGCTCCAAAGATCACTCCC 59.463 55.000 0.00 0.00 0.00 4.30
34 35 1.205893 ACTCGCTCCAAAGATCACTCC 59.794 52.381 0.00 0.00 0.00 3.85
35 36 2.663826 ACTCGCTCCAAAGATCACTC 57.336 50.000 0.00 0.00 0.00 3.51
36 37 3.093057 AGTACTCGCTCCAAAGATCACT 58.907 45.455 0.00 0.00 0.00 3.41
37 38 3.440228 GAGTACTCGCTCCAAAGATCAC 58.560 50.000 7.22 0.00 0.00 3.06
38 39 3.784701 GAGTACTCGCTCCAAAGATCA 57.215 47.619 7.22 0.00 0.00 2.92
47 48 3.304190 GCTAAGCTAAGGAGTACTCGCTC 60.304 52.174 19.25 6.51 35.57 5.03
48 49 2.619646 GCTAAGCTAAGGAGTACTCGCT 59.380 50.000 16.56 15.64 37.44 4.93
49 50 2.619646 AGCTAAGCTAAGGAGTACTCGC 59.380 50.000 16.56 13.68 36.99 5.03
50 51 5.049954 CACTAGCTAAGCTAAGGAGTACTCG 60.050 48.000 16.56 4.06 40.82 4.18
51 52 6.056884 TCACTAGCTAAGCTAAGGAGTACTC 58.943 44.000 14.87 14.87 40.82 2.59
52 53 6.003859 TCACTAGCTAAGCTAAGGAGTACT 57.996 41.667 0.00 0.00 40.82 2.73
53 54 6.887626 ATCACTAGCTAAGCTAAGGAGTAC 57.112 41.667 0.00 0.00 40.82 2.73
54 55 7.255173 CGAAATCACTAGCTAAGCTAAGGAGTA 60.255 40.741 0.00 0.00 40.82 2.59
55 56 6.460399 CGAAATCACTAGCTAAGCTAAGGAGT 60.460 42.308 0.00 0.00 40.82 3.85
56 57 5.918011 CGAAATCACTAGCTAAGCTAAGGAG 59.082 44.000 0.00 0.00 40.82 3.69
57 58 5.221263 CCGAAATCACTAGCTAAGCTAAGGA 60.221 44.000 0.00 0.00 40.82 3.36
58 59 4.985409 CCGAAATCACTAGCTAAGCTAAGG 59.015 45.833 0.00 0.00 40.82 2.69
59 60 4.985409 CCCGAAATCACTAGCTAAGCTAAG 59.015 45.833 0.00 0.00 40.82 2.18
60 61 4.647853 TCCCGAAATCACTAGCTAAGCTAA 59.352 41.667 0.00 0.00 40.82 3.09
61 62 4.212716 TCCCGAAATCACTAGCTAAGCTA 58.787 43.478 0.00 0.00 40.44 3.32
62 63 3.031736 TCCCGAAATCACTAGCTAAGCT 58.968 45.455 0.00 0.00 43.41 3.74
63 64 3.454371 TCCCGAAATCACTAGCTAAGC 57.546 47.619 0.00 0.00 0.00 3.09
64 65 6.927294 ATTTTCCCGAAATCACTAGCTAAG 57.073 37.500 0.00 0.00 32.49 2.18
65 66 6.317893 GGAATTTTCCCGAAATCACTAGCTAA 59.682 38.462 0.00 0.00 41.62 3.09
66 67 5.820947 GGAATTTTCCCGAAATCACTAGCTA 59.179 40.000 0.00 0.00 41.62 3.32
67 68 4.640647 GGAATTTTCCCGAAATCACTAGCT 59.359 41.667 0.00 0.00 41.62 3.32
68 69 4.921547 GGAATTTTCCCGAAATCACTAGC 58.078 43.478 0.00 0.00 41.62 3.42
170 171 8.268850 ACTCAAATGTTCGCTCTTTGTTATAT 57.731 30.769 0.00 0.00 32.89 0.86
171 172 7.667043 ACTCAAATGTTCGCTCTTTGTTATA 57.333 32.000 0.00 0.00 32.89 0.98
180 181 4.144731 CGTCAAAAACTCAAATGTTCGCTC 59.855 41.667 0.00 0.00 0.00 5.03
187 188 7.910162 TCTTTCTTCTCGTCAAAAACTCAAATG 59.090 33.333 0.00 0.00 0.00 2.32
206 208 3.404224 GGGACGACTCCTTTCTTTCTT 57.596 47.619 0.00 0.00 36.68 2.52
297 303 2.733593 GACACCGGACAGACACGC 60.734 66.667 9.46 0.00 0.00 5.34
309 315 2.432628 CAGGGCGAACGAGACACC 60.433 66.667 0.00 0.00 0.00 4.16
374 380 0.692419 GCCAGGAAGGAGATGGGAGA 60.692 60.000 0.00 0.00 41.22 3.71
462 475 3.112709 GTCAGGCTGGACGAACGC 61.113 66.667 15.73 0.00 0.00 4.84
466 479 3.062466 CGAGGTCAGGCTGGACGA 61.062 66.667 15.73 0.00 38.70 4.20
560 588 2.092323 GGCCACATTTCCTGTAGAACC 58.908 52.381 0.00 0.00 35.91 3.62
786 817 8.383175 TCCAGTTCAGATTTGATAACTAAAGGT 58.617 33.333 0.00 0.00 32.27 3.50
834 1060 8.989980 GCGGATTTAGCTACACTTTTTAGATAT 58.010 33.333 0.00 0.00 0.00 1.63
840 1066 4.760204 AGTGCGGATTTAGCTACACTTTTT 59.240 37.500 6.61 0.00 34.89 1.94
847 1073 3.933332 AGACAAAGTGCGGATTTAGCTAC 59.067 43.478 0.00 0.00 35.28 3.58
907 1133 1.792949 GAACCGATATAAGCCACAGCG 59.207 52.381 0.00 0.00 46.67 5.18
910 1136 2.166870 ACGTGAACCGATATAAGCCACA 59.833 45.455 0.00 0.00 40.70 4.17
913 1139 1.525619 GCACGTGAACCGATATAAGCC 59.474 52.381 22.23 0.00 40.70 4.35
923 1149 1.154727 CGTAAAGCGCACGTGAACC 60.155 57.895 22.23 6.06 34.74 3.62
928 1154 3.411351 CTGCCGTAAAGCGCACGT 61.411 61.111 11.47 0.00 37.71 4.49
933 1160 2.750888 GCCCTTCTGCCGTAAAGCG 61.751 63.158 0.00 0.00 40.95 4.68
944 1172 3.575687 GCCAATAAATATGCAGCCCTTCT 59.424 43.478 0.00 0.00 0.00 2.85
948 1176 2.028748 CCAGCCAATAAATATGCAGCCC 60.029 50.000 0.00 0.00 0.00 5.19
976 1204 3.437049 GGAATTTGGAGTTCGGAGACAAG 59.563 47.826 0.00 0.00 34.32 3.16
978 1206 2.370519 TGGAATTTGGAGTTCGGAGACA 59.629 45.455 0.00 0.00 34.32 3.41
979 1207 3.053831 TGGAATTTGGAGTTCGGAGAC 57.946 47.619 0.00 0.00 34.32 3.36
1005 1233 0.738762 GAAGGGGTTTAGACGCGGAC 60.739 60.000 12.47 3.93 39.45 4.79
1043 1271 2.112198 GGTCGAATCGGCATGGCAA 61.112 57.895 20.37 0.00 30.88 4.52
1109 1343 2.105984 GCAATGGAGCGTAATGGCA 58.894 52.632 0.00 0.00 34.64 4.92
1197 1431 2.160205 TGTAACGAGTGGAGTGGAGAG 58.840 52.381 0.00 0.00 0.00 3.20
1206 1440 5.465390 TGTCAAAGAGAAATGTAACGAGTGG 59.535 40.000 0.00 0.00 0.00 4.00
1207 1441 6.525121 TGTCAAAGAGAAATGTAACGAGTG 57.475 37.500 0.00 0.00 0.00 3.51
1208 1442 5.177696 GCTGTCAAAGAGAAATGTAACGAGT 59.822 40.000 0.00 0.00 0.00 4.18
1209 1443 5.612865 GCTGTCAAAGAGAAATGTAACGAG 58.387 41.667 0.00 0.00 0.00 4.18
1210 1444 4.149922 CGCTGTCAAAGAGAAATGTAACGA 59.850 41.667 0.00 0.00 0.00 3.85
1211 1445 4.084537 ACGCTGTCAAAGAGAAATGTAACG 60.085 41.667 0.00 0.00 0.00 3.18
1256 1490 2.221055 GCACAAGAACCTTCACAGTACG 59.779 50.000 0.00 0.00 0.00 3.67
1384 1618 1.364171 CGTCCCATAGGAAGCCTCG 59.636 63.158 0.00 0.00 46.38 4.63
1501 1795 8.655651 TGCTCCTTTTATAAACCAAACAAAAG 57.344 30.769 0.00 0.00 36.45 2.27
1564 1858 7.112452 ACAAAGCTGTTTATCTCCTGTTTTT 57.888 32.000 0.00 0.00 28.57 1.94
1601 1895 0.618680 TCAGGATACCAGCACAGCCT 60.619 55.000 0.00 0.00 37.17 4.58
1642 1937 3.319689 GGGTGAGCTAGTAGAGAATGGTC 59.680 52.174 0.00 0.00 0.00 4.02
1648 1945 2.158445 GGATGGGGTGAGCTAGTAGAGA 60.158 54.545 0.00 0.00 0.00 3.10
1660 4674 3.306710 GGTTTTTAAAGCTGGATGGGGTG 60.307 47.826 0.00 0.00 33.81 4.61
1673 4687 8.269317 TGGAGTTCTAAGACTCTGGTTTTTAAA 58.731 33.333 5.17 0.00 44.32 1.52
1709 4724 1.056700 AGGTGTTGAGGCTGTCCTGT 61.057 55.000 0.00 0.00 44.46 4.00
1730 4746 4.201628 CGCTGTATTGACTAGTTTGACTGC 60.202 45.833 0.00 8.12 0.00 4.40
1748 4764 1.006102 CGTCAGAAAGGGTCGCTGT 60.006 57.895 0.00 0.00 0.00 4.40
1838 4859 4.397420 ACAATTGGTCATGTCTGCAGTTA 58.603 39.130 14.67 4.26 0.00 2.24
1843 4864 4.619973 TCAAAACAATTGGTCATGTCTGC 58.380 39.130 10.83 0.00 0.00 4.26
1851 4872 5.691754 AGCGATTTCTTCAAAACAATTGGTC 59.308 36.000 10.83 0.00 0.00 4.02
1870 5300 4.015872 TGGGTTGTTCTTAAGAAGCGAT 57.984 40.909 18.22 0.00 33.46 4.58
1879 5309 2.510382 TGGTCAGGTTGGGTTGTTCTTA 59.490 45.455 0.00 0.00 0.00 2.10
1895 5325 1.357137 TGATGGCTAACCTGTGGTCA 58.643 50.000 0.00 0.00 33.12 4.02
1992 5424 5.385198 TCTGGGATTTCAGCTTTACTTTGT 58.615 37.500 0.00 0.00 34.91 2.83
1997 5429 3.758554 TGCTTCTGGGATTTCAGCTTTAC 59.241 43.478 0.00 0.00 34.91 2.01
2024 5456 4.134379 AGTCCTATTACGAGACGTCAGA 57.866 45.455 19.50 0.00 41.54 3.27
2032 5464 7.658261 TGGATAATGTCAAGTCCTATTACGAG 58.342 38.462 0.00 0.00 0.00 4.18
2033 5465 7.591421 TGGATAATGTCAAGTCCTATTACGA 57.409 36.000 0.00 0.00 0.00 3.43
2071 7252 0.720232 TAGGGGCTGGAAAGGGACTA 59.280 55.000 0.00 0.00 38.49 2.59
2104 7285 5.601662 TCCACAGTAGCATATTCAGTAAGC 58.398 41.667 0.00 0.00 0.00 3.09
2121 7302 2.951642 TCCTTTGTCTTGCTTTCCACAG 59.048 45.455 0.00 0.00 0.00 3.66
2123 7304 4.385358 TTTCCTTTGTCTTGCTTTCCAC 57.615 40.909 0.00 0.00 0.00 4.02
2124 7305 4.382577 GGTTTTCCTTTGTCTTGCTTTCCA 60.383 41.667 0.00 0.00 36.94 3.53
2152 7336 6.353951 CCTGATCAGTAAAATTCCCCCTAGTT 60.354 42.308 21.11 0.00 0.00 2.24
2153 7337 5.132816 CCTGATCAGTAAAATTCCCCCTAGT 59.867 44.000 21.11 0.00 0.00 2.57
2173 7357 2.701951 ACAGTTCGTTCCCTTTACCTGA 59.298 45.455 0.00 0.00 0.00 3.86
2272 7551 4.380531 TGCTGTTCTGTGGAGTTCTTTAG 58.619 43.478 0.00 0.00 0.00 1.85
2285 7564 3.063510 TGGGAGAAGAATGCTGTTCTG 57.936 47.619 5.83 0.00 35.39 3.02
2327 7606 2.065899 TCACTCAGGGTTTTGGTTGG 57.934 50.000 0.00 0.00 0.00 3.77
2349 7629 2.284190 GAATTGGACAGTAGCTGGAGC 58.716 52.381 0.00 0.00 42.49 4.70
2381 7662 3.746492 AGTTTGCTCGGTTGTACAATCTC 59.254 43.478 16.56 6.51 0.00 2.75
2575 9411 0.883153 GGCATGTCACAATCAGCACA 59.117 50.000 0.00 0.00 0.00 4.57
2586 9422 3.489355 ACAACAAAGAGATGGCATGTCA 58.511 40.909 24.46 0.60 0.00 3.58
2602 9438 2.236146 ACAGGTGAAGTGAGTGACAACA 59.764 45.455 0.00 0.00 0.00 3.33
2617 9453 8.346300 TGTAACAAACATATAACAACACAGGTG 58.654 33.333 0.00 0.00 31.43 4.00
2805 9641 0.967380 CCCAGGGCATGAGAACAACC 60.967 60.000 0.00 0.00 0.00 3.77
3142 10022 5.236047 GTCTAGTCAGCTAAAAGGCATGATG 59.764 44.000 0.00 0.00 34.17 3.07
3217 10097 5.360144 TCTGAATTGCAGGTAGAGTAGTACC 59.640 44.000 0.00 0.00 44.98 3.34
3226 10106 4.418392 GCAACAATCTGAATTGCAGGTAG 58.582 43.478 15.57 0.00 46.37 3.18
3297 10177 8.028938 TGCTAGCATTCTTCCTTTAAATTGTTC 58.971 33.333 14.93 0.00 0.00 3.18
3308 10188 6.942576 TCTAAAAACTTGCTAGCATTCTTCCT 59.057 34.615 20.13 3.67 0.00 3.36
3347 10227 3.947834 AGTTGCACCTCATAAAGCCATAC 59.052 43.478 0.00 0.00 0.00 2.39
3352 10232 4.773323 AAGAAGTTGCACCTCATAAAGC 57.227 40.909 0.00 0.00 0.00 3.51
3708 10595 0.680921 CTCGTGTTGCCCAATCCCAT 60.681 55.000 0.00 0.00 0.00 4.00
3859 10754 1.051812 AGCGTATGAGGGGGAATCAG 58.948 55.000 0.00 0.00 0.00 2.90
3926 10821 9.461312 ACTTTATTTTTCACACTAGCATGGATA 57.539 29.630 0.00 0.00 0.00 2.59
3929 10824 7.271223 CGAACTTTATTTTTCACACTAGCATGG 59.729 37.037 0.00 0.00 0.00 3.66
3955 10854 9.828852 CCGAAAGTAATGACTAGACAGATATAC 57.171 37.037 0.00 0.02 33.58 1.47
4134 11044 6.262273 ACCACATTTATATTTGCCCGTCTTAG 59.738 38.462 0.00 0.00 0.00 2.18
4220 11130 5.244626 AGAAGCACCCAATATGCATTTATCC 59.755 40.000 3.54 0.00 45.92 2.59
4286 11196 7.457868 AGCATCAAATAAAAATGTGAAATGCG 58.542 30.769 0.00 0.00 33.36 4.73
4333 11243 8.642020 GCAAATATTTGAGCACAAACTCTTAAG 58.358 33.333 28.33 0.00 46.56 1.85
4336 11246 6.752168 AGCAAATATTTGAGCACAAACTCTT 58.248 32.000 28.33 3.38 46.56 2.85
4390 11303 9.926158 AGCTCTCTATATCACAAATATTGTCAG 57.074 33.333 0.00 0.00 43.23 3.51
4412 11325 7.095982 GCTGGAATTTTCGTATTCTAGTAGCTC 60.096 40.741 15.99 0.00 42.10 4.09
4546 11462 3.002656 CGCACAGGCATAACTATGAAAGG 59.997 47.826 0.77 0.00 41.24 3.11
4635 11573 5.687285 GGGCAATGAAATTCTTAATGCTACG 59.313 40.000 10.66 0.00 31.22 3.51
4644 11582 3.055602 GGAAGCTGGGCAATGAAATTCTT 60.056 43.478 0.00 0.00 31.22 2.52
4654 11592 4.464008 CTGAATTATAGGAAGCTGGGCAA 58.536 43.478 0.00 0.00 0.00 4.52
4664 11602 6.823182 CACACATGAACACCTGAATTATAGGA 59.177 38.462 13.64 0.00 38.71 2.94
4884 11827 2.434336 TGGAGAATAACTGATCCCACCG 59.566 50.000 0.00 0.00 0.00 4.94
5053 12004 1.812922 CCTGGCACGTGAGCTGATC 60.813 63.158 22.23 0.00 34.17 2.92
5064 12015 1.940613 GATCCGTCAATAACCTGGCAC 59.059 52.381 0.00 0.00 0.00 5.01
5121 12072 0.898320 CCATGACTGTTCCGAGTCCT 59.102 55.000 0.00 0.00 41.59 3.85
5251 12207 2.429478 TCAGCACATCACTCCATTGTG 58.571 47.619 0.00 0.00 42.80 3.33
5262 12218 5.104374 CCATAACCAAACATTCAGCACATC 58.896 41.667 0.00 0.00 0.00 3.06
5266 12222 4.406456 AGACCATAACCAAACATTCAGCA 58.594 39.130 0.00 0.00 0.00 4.41
5287 12243 4.428209 CATAGCTACCGCAAGATCCATAG 58.572 47.826 0.00 0.00 43.02 2.23
5339 12295 5.305128 ACAGAAGAAAATTTTGCCATCTCCA 59.695 36.000 8.47 0.00 0.00 3.86
5418 12374 2.559668 CCAATGCAGTTGTGGTTCATCT 59.440 45.455 0.00 0.00 36.01 2.90
5448 12404 0.883370 GACGTGAACTGACCCCAACC 60.883 60.000 0.00 0.00 0.00 3.77
5464 12420 1.057822 CGCGCAGAACATCTTGACG 59.942 57.895 8.75 0.00 0.00 4.35
5465 12421 1.014044 TCCGCGCAGAACATCTTGAC 61.014 55.000 8.75 0.00 0.00 3.18
5507 12466 1.404717 CCAAGCACAGATAGAGCACGT 60.405 52.381 0.00 0.00 36.17 4.49
5515 12474 0.253044 GTGGCCTCCAAGCACAGATA 59.747 55.000 3.32 0.00 34.18 1.98
5518 12477 1.970114 CAGTGGCCTCCAAGCACAG 60.970 63.158 3.32 0.00 34.18 3.66
5526 12485 2.284995 AGGTCCTCAGTGGCCTCC 60.285 66.667 3.32 0.00 37.67 4.30
5531 12490 1.134965 CGCTTTAGAGGTCCTCAGTGG 60.135 57.143 21.26 9.19 32.06 4.00
5533 12492 1.187087 CCGCTTTAGAGGTCCTCAGT 58.813 55.000 21.26 3.72 32.06 3.41
5535 12494 1.898154 GCCGCTTTAGAGGTCCTCA 59.102 57.895 21.26 4.38 37.33 3.86
5591 12556 2.594303 CTGCCACGGGTTCAGCAA 60.594 61.111 0.00 0.00 34.26 3.91
5592 12557 3.113514 TTCTGCCACGGGTTCAGCA 62.114 57.895 0.00 0.00 0.00 4.41
5597 12564 2.594592 GCTGTTCTGCCACGGGTT 60.595 61.111 0.00 0.00 0.00 4.11
5604 12571 0.950555 TCGTCACATGCTGTTCTGCC 60.951 55.000 0.00 0.00 0.00 4.85
5607 12574 2.462456 ATGTCGTCACATGCTGTTCT 57.538 45.000 0.00 0.00 42.05 3.01
5609 12576 3.618594 GTCATATGTCGTCACATGCTGTT 59.381 43.478 1.90 0.00 43.54 3.16
5622 12589 7.776933 ACATAATGCCGATATGTCATATGTC 57.223 36.000 10.15 0.00 39.20 3.06
5629 12596 3.501828 TGCCAACATAATGCCGATATGTC 59.498 43.478 6.60 0.00 41.80 3.06
5630 12597 3.485394 TGCCAACATAATGCCGATATGT 58.515 40.909 1.53 1.53 43.88 2.29
5631 12598 4.022935 ACTTGCCAACATAATGCCGATATG 60.023 41.667 0.00 0.00 36.92 1.78
5632 12599 4.144297 ACTTGCCAACATAATGCCGATAT 58.856 39.130 0.00 0.00 0.00 1.63
5633 12600 3.550820 ACTTGCCAACATAATGCCGATA 58.449 40.909 0.00 0.00 0.00 2.92
5634 12601 2.378038 ACTTGCCAACATAATGCCGAT 58.622 42.857 0.00 0.00 0.00 4.18
5635 12602 1.832883 ACTTGCCAACATAATGCCGA 58.167 45.000 0.00 0.00 0.00 5.54
5641 12608 9.606631 AAGTTGAAAATAAACTTGCCAACATAA 57.393 25.926 0.00 0.00 44.21 1.90
5649 12621 5.177511 GCCCAGAAGTTGAAAATAAACTTGC 59.822 40.000 6.30 0.87 45.50 4.01
5676 12648 2.098117 GGAAAGCATACGCAAGCAGATT 59.902 45.455 0.00 0.00 42.27 2.40
5677 12649 1.672881 GGAAAGCATACGCAAGCAGAT 59.327 47.619 0.00 0.00 42.27 2.90
5690 12662 5.260424 TGCACCTTAATATTCAGGAAAGCA 58.740 37.500 20.33 20.51 35.32 3.91
5706 12678 1.530419 TTTGCGGGTCATGCACCTT 60.530 52.632 12.27 0.00 45.95 3.50
5719 12691 5.331098 TGCTTGATGTATTGTATGTTTGCG 58.669 37.500 0.00 0.00 0.00 4.85
5736 12709 9.859427 CAGTTTTATGGATCTATTTTTGCTTGA 57.141 29.630 0.00 0.00 0.00 3.02
5756 12729 7.871853 AGTAACATCAAACGATAAGCAGTTTT 58.128 30.769 0.00 0.00 38.37 2.43
5757 12730 7.435068 AGTAACATCAAACGATAAGCAGTTT 57.565 32.000 0.00 0.00 40.74 2.66
5765 12738 7.609760 AGCATCAAAGTAACATCAAACGATA 57.390 32.000 0.00 0.00 0.00 2.92
5779 12752 7.820872 AGCAAAATTATAAGCAAGCATCAAAGT 59.179 29.630 0.00 0.00 0.00 2.66
5785 12758 7.603404 TCACAAAGCAAAATTATAAGCAAGCAT 59.397 29.630 0.00 0.00 0.00 3.79
5807 12787 8.821147 AACATAACATAAACTCGTTAGTCACA 57.179 30.769 0.00 0.00 33.75 3.58
5853 12836 4.706476 TCTGAATACTCCCATTTTTGGCAG 59.294 41.667 0.00 0.00 0.00 4.85
5854 12837 4.671831 TCTGAATACTCCCATTTTTGGCA 58.328 39.130 0.00 0.00 0.00 4.92
5855 12838 4.949856 TCTCTGAATACTCCCATTTTTGGC 59.050 41.667 0.00 0.00 0.00 4.52
5856 12839 7.466746 TTTCTCTGAATACTCCCATTTTTGG 57.533 36.000 0.00 0.00 0.00 3.28
5894 12877 8.344098 CAAGATGCATTACCAAATTGTGTTTTT 58.656 29.630 0.00 0.00 0.00 1.94
5895 12878 7.041235 CCAAGATGCATTACCAAATTGTGTTTT 60.041 33.333 0.00 0.00 0.00 2.43
5896 12879 6.427547 CCAAGATGCATTACCAAATTGTGTTT 59.572 34.615 0.00 0.00 0.00 2.83
5897 12880 5.933463 CCAAGATGCATTACCAAATTGTGTT 59.067 36.000 0.00 0.00 0.00 3.32
5898 12881 5.481105 CCAAGATGCATTACCAAATTGTGT 58.519 37.500 0.00 0.00 0.00 3.72
5899 12882 4.871557 CCCAAGATGCATTACCAAATTGTG 59.128 41.667 0.00 0.00 0.00 3.33
5900 12883 4.080975 CCCCAAGATGCATTACCAAATTGT 60.081 41.667 0.00 0.00 0.00 2.71
5901 12884 4.444536 CCCCAAGATGCATTACCAAATTG 58.555 43.478 0.00 0.00 0.00 2.32
5902 12885 3.118298 GCCCCAAGATGCATTACCAAATT 60.118 43.478 0.00 0.00 0.00 1.82
5925 12908 6.702723 TGTACTATTGTAGCAACAGAAACGTT 59.297 34.615 0.00 0.00 36.83 3.99
5926 12909 6.218019 TGTACTATTGTAGCAACAGAAACGT 58.782 36.000 0.00 0.00 36.83 3.99
5927 12910 6.699895 TGTACTATTGTAGCAACAGAAACG 57.300 37.500 0.00 0.00 36.83 3.60
5929 12912 9.713713 TTGTATGTACTATTGTAGCAACAGAAA 57.286 29.630 0.00 0.00 36.83 2.52
5937 12920 8.943002 AGGTTTTGTTGTATGTACTATTGTAGC 58.057 33.333 0.00 0.00 0.00 3.58
5947 12931 8.547967 TTTTTGCAAAGGTTTTGTTGTATGTA 57.452 26.923 12.41 0.00 0.00 2.29
5972 12956 4.079558 AGACTTGGTAATGCCCATGAGATT 60.080 41.667 0.00 0.00 33.60 2.40
6009 12993 1.141053 GCGAACATTATCCCTGGGAGT 59.859 52.381 21.99 10.55 34.05 3.85
6010 12994 1.417890 AGCGAACATTATCCCTGGGAG 59.582 52.381 21.99 9.86 34.05 4.30
6011 12995 1.507140 AGCGAACATTATCCCTGGGA 58.493 50.000 19.69 19.69 35.55 4.37
6012 12996 1.949525 CAAGCGAACATTATCCCTGGG 59.050 52.381 6.33 6.33 0.00 4.45
6013 12997 1.949525 CCAAGCGAACATTATCCCTGG 59.050 52.381 0.00 0.00 0.00 4.45
6014 12998 2.355756 CACCAAGCGAACATTATCCCTG 59.644 50.000 0.00 0.00 0.00 4.45
6015 12999 2.643551 CACCAAGCGAACATTATCCCT 58.356 47.619 0.00 0.00 0.00 4.20
6016 13000 1.065551 GCACCAAGCGAACATTATCCC 59.934 52.381 0.00 0.00 0.00 3.85
6017 13001 2.475200 GCACCAAGCGAACATTATCC 57.525 50.000 0.00 0.00 0.00 2.59
6028 13012 3.708563 TTACAAACTTCAGCACCAAGC 57.291 42.857 0.00 0.00 46.19 4.01
6029 13013 5.050837 GCAAATTACAAACTTCAGCACCAAG 60.051 40.000 0.00 0.00 0.00 3.61
6030 13014 4.808364 GCAAATTACAAACTTCAGCACCAA 59.192 37.500 0.00 0.00 0.00 3.67
6031 13015 4.142071 TGCAAATTACAAACTTCAGCACCA 60.142 37.500 0.00 0.00 0.00 4.17
6032 13016 4.367450 TGCAAATTACAAACTTCAGCACC 58.633 39.130 0.00 0.00 0.00 5.01
6033 13017 4.445385 CCTGCAAATTACAAACTTCAGCAC 59.555 41.667 0.00 0.00 0.00 4.40
6034 13018 4.501229 CCCTGCAAATTACAAACTTCAGCA 60.501 41.667 0.00 0.00 0.00 4.41
6035 13019 3.989817 CCCTGCAAATTACAAACTTCAGC 59.010 43.478 0.00 0.00 0.00 4.26
6036 13020 5.200368 ACCCTGCAAATTACAAACTTCAG 57.800 39.130 0.00 0.00 0.00 3.02
6037 13021 5.830991 AGTACCCTGCAAATTACAAACTTCA 59.169 36.000 0.00 0.00 0.00 3.02
6038 13022 6.327279 AGTACCCTGCAAATTACAAACTTC 57.673 37.500 0.00 0.00 0.00 3.01
6039 13023 6.724893 AAGTACCCTGCAAATTACAAACTT 57.275 33.333 0.00 0.00 0.00 2.66
6040 13024 6.724893 AAAGTACCCTGCAAATTACAAACT 57.275 33.333 0.00 0.00 0.00 2.66
6041 13025 7.878036 TCTAAAGTACCCTGCAAATTACAAAC 58.122 34.615 0.00 0.00 0.00 2.93
6042 13026 8.354426 GTTCTAAAGTACCCTGCAAATTACAAA 58.646 33.333 0.00 0.00 0.00 2.83
6043 13027 7.502895 TGTTCTAAAGTACCCTGCAAATTACAA 59.497 33.333 0.00 0.00 0.00 2.41
6044 13028 6.999272 TGTTCTAAAGTACCCTGCAAATTACA 59.001 34.615 0.00 0.00 0.00 2.41
6045 13029 7.303261 GTGTTCTAAAGTACCCTGCAAATTAC 58.697 38.462 0.00 0.00 0.00 1.89
6046 13030 6.431852 GGTGTTCTAAAGTACCCTGCAAATTA 59.568 38.462 0.00 0.00 0.00 1.40
6047 13031 5.243060 GGTGTTCTAAAGTACCCTGCAAATT 59.757 40.000 0.00 0.00 0.00 1.82
6048 13032 4.765339 GGTGTTCTAAAGTACCCTGCAAAT 59.235 41.667 0.00 0.00 0.00 2.32
6049 13033 4.139038 GGTGTTCTAAAGTACCCTGCAAA 58.861 43.478 0.00 0.00 0.00 3.68
6050 13034 3.136809 TGGTGTTCTAAAGTACCCTGCAA 59.863 43.478 0.00 0.00 32.20 4.08
6051 13035 2.706723 TGGTGTTCTAAAGTACCCTGCA 59.293 45.455 0.00 0.00 32.20 4.41
6052 13036 3.072211 GTGGTGTTCTAAAGTACCCTGC 58.928 50.000 0.00 0.00 32.20 4.85
6053 13037 4.345859 TGTGGTGTTCTAAAGTACCCTG 57.654 45.455 0.00 0.00 32.20 4.45
6054 13038 4.745783 GCTTGTGGTGTTCTAAAGTACCCT 60.746 45.833 0.00 0.00 32.20 4.34
6055 13039 3.501062 GCTTGTGGTGTTCTAAAGTACCC 59.499 47.826 0.00 0.00 32.20 3.69
6056 13040 4.131596 TGCTTGTGGTGTTCTAAAGTACC 58.868 43.478 0.00 0.00 0.00 3.34
6057 13041 4.319549 GCTGCTTGTGGTGTTCTAAAGTAC 60.320 45.833 0.00 0.00 0.00 2.73
6058 13042 3.813166 GCTGCTTGTGGTGTTCTAAAGTA 59.187 43.478 0.00 0.00 0.00 2.24
6059 13043 2.618709 GCTGCTTGTGGTGTTCTAAAGT 59.381 45.455 0.00 0.00 0.00 2.66
6060 13044 2.880890 AGCTGCTTGTGGTGTTCTAAAG 59.119 45.455 0.00 0.00 0.00 1.85
6061 13045 2.930950 AGCTGCTTGTGGTGTTCTAAA 58.069 42.857 0.00 0.00 0.00 1.85
6062 13046 2.638480 AGCTGCTTGTGGTGTTCTAA 57.362 45.000 0.00 0.00 0.00 2.10
6063 13047 2.638480 AAGCTGCTTGTGGTGTTCTA 57.362 45.000 15.16 0.00 0.00 2.10
6064 13048 1.767759 AAAGCTGCTTGTGGTGTTCT 58.232 45.000 16.73 0.00 0.00 3.01
6065 13049 2.099756 AGAAAAGCTGCTTGTGGTGTTC 59.900 45.455 16.73 13.96 31.42 3.18
6066 13050 2.102578 AGAAAAGCTGCTTGTGGTGTT 58.897 42.857 16.73 5.00 0.00 3.32
6067 13051 1.406539 CAGAAAAGCTGCTTGTGGTGT 59.593 47.619 16.73 0.00 37.90 4.16
6068 13052 2.129823 CAGAAAAGCTGCTTGTGGTG 57.870 50.000 16.73 6.40 37.90 4.17
6078 13062 5.946942 TGGATCTATCAGACAGAAAAGCT 57.053 39.130 0.00 0.00 0.00 3.74
6079 13063 6.036953 CAGTTGGATCTATCAGACAGAAAAGC 59.963 42.308 0.00 0.00 0.00 3.51
6080 13064 7.326454 TCAGTTGGATCTATCAGACAGAAAAG 58.674 38.462 0.00 0.00 0.00 2.27
6081 13065 7.244886 TCAGTTGGATCTATCAGACAGAAAA 57.755 36.000 0.00 0.00 0.00 2.29
6082 13066 6.857437 TCAGTTGGATCTATCAGACAGAAA 57.143 37.500 0.00 0.00 0.00 2.52
6083 13067 8.539117 TTATCAGTTGGATCTATCAGACAGAA 57.461 34.615 0.00 0.00 37.44 3.02
6084 13068 8.539117 TTTATCAGTTGGATCTATCAGACAGA 57.461 34.615 0.00 0.00 37.44 3.41
6085 13069 9.205719 CATTTATCAGTTGGATCTATCAGACAG 57.794 37.037 0.00 0.00 37.44 3.51
6086 13070 8.708378 ACATTTATCAGTTGGATCTATCAGACA 58.292 33.333 0.00 0.00 37.44 3.41
6087 13071 8.986847 CACATTTATCAGTTGGATCTATCAGAC 58.013 37.037 0.00 0.00 37.44 3.51
6088 13072 8.152898 CCACATTTATCAGTTGGATCTATCAGA 58.847 37.037 0.00 0.00 37.44 3.27
6089 13073 7.094890 GCCACATTTATCAGTTGGATCTATCAG 60.095 40.741 0.00 0.00 37.44 2.90
6090 13074 6.712095 GCCACATTTATCAGTTGGATCTATCA 59.288 38.462 0.00 0.00 37.44 2.15
6091 13075 6.712095 TGCCACATTTATCAGTTGGATCTATC 59.288 38.462 0.00 0.00 37.44 2.08
6092 13076 6.604171 TGCCACATTTATCAGTTGGATCTAT 58.396 36.000 0.00 0.00 37.44 1.98
6093 13077 6.000246 TGCCACATTTATCAGTTGGATCTA 58.000 37.500 0.00 0.00 37.44 1.98
6094 13078 4.858850 TGCCACATTTATCAGTTGGATCT 58.141 39.130 0.00 0.00 37.44 2.75
6095 13079 4.498682 GCTGCCACATTTATCAGTTGGATC 60.499 45.833 0.00 0.00 37.44 3.36
6096 13080 3.382546 GCTGCCACATTTATCAGTTGGAT 59.617 43.478 0.00 0.00 40.14 3.41
6097 13081 2.754552 GCTGCCACATTTATCAGTTGGA 59.245 45.455 0.00 0.00 0.00 3.53
6098 13082 2.159198 GGCTGCCACATTTATCAGTTGG 60.159 50.000 15.17 0.00 0.00 3.77
6099 13083 2.159198 GGGCTGCCACATTTATCAGTTG 60.159 50.000 22.05 0.00 0.00 3.16
6100 13084 2.102578 GGGCTGCCACATTTATCAGTT 58.897 47.619 22.05 0.00 0.00 3.16
6101 13085 1.767759 GGGCTGCCACATTTATCAGT 58.232 50.000 22.05 0.00 0.00 3.41
6102 13086 0.664761 CGGGCTGCCACATTTATCAG 59.335 55.000 22.05 0.00 0.00 2.90
6103 13087 0.751277 CCGGGCTGCCACATTTATCA 60.751 55.000 22.05 0.00 0.00 2.15
6104 13088 2.032981 CCGGGCTGCCACATTTATC 58.967 57.895 22.05 0.00 0.00 1.75
6105 13089 2.127232 GCCGGGCTGCCACATTTAT 61.127 57.895 22.05 0.00 0.00 1.40
6106 13090 2.753849 GCCGGGCTGCCACATTTA 60.754 61.111 22.05 0.00 0.00 1.40
6107 13091 4.684134 AGCCGGGCTGCCACATTT 62.684 61.111 23.19 0.00 37.57 2.32
6108 13092 4.684134 AAGCCGGGCTGCCACATT 62.684 61.111 24.63 0.90 39.62 2.71
6109 13093 4.684134 AAAGCCGGGCTGCCACAT 62.684 61.111 24.63 1.78 39.62 3.21
6110 13094 2.985539 TAAAAAGCCGGGCTGCCACA 62.986 55.000 24.63 4.33 39.62 4.17
6111 13095 2.272447 TAAAAAGCCGGGCTGCCAC 61.272 57.895 24.63 9.27 39.62 5.01
6112 13096 2.116340 TAAAAAGCCGGGCTGCCA 59.884 55.556 24.63 5.50 39.62 4.92
6113 13097 2.571757 GTAAAAAGCCGGGCTGCC 59.428 61.111 24.63 11.05 39.62 4.85
6114 13098 2.178273 CGTAAAAAGCCGGGCTGC 59.822 61.111 24.63 9.71 39.62 5.25
6115 13099 2.178273 GCGTAAAAAGCCGGGCTG 59.822 61.111 24.63 10.01 39.62 4.85
6116 13100 3.428282 CGCGTAAAAAGCCGGGCT 61.428 61.111 17.69 17.69 42.56 5.19
6118 13102 4.804725 CGCGCGTAAAAAGCCGGG 62.805 66.667 24.19 0.00 0.00 5.73
6119 13103 3.297944 TTCGCGCGTAAAAAGCCGG 62.298 57.895 30.98 0.00 0.00 6.13
6120 13104 2.135591 GTTCGCGCGTAAAAAGCCG 61.136 57.895 30.98 0.00 0.00 5.52
6121 13105 0.385098 AAGTTCGCGCGTAAAAAGCC 60.385 50.000 30.98 7.04 0.00 4.35
6122 13106 1.391787 AAAGTTCGCGCGTAAAAAGC 58.608 45.000 30.98 12.17 0.00 3.51
6123 13107 5.528473 TTAAAAAGTTCGCGCGTAAAAAG 57.472 34.783 30.98 0.00 0.00 2.27
6124 13108 5.921784 TTTAAAAAGTTCGCGCGTAAAAA 57.078 30.435 30.98 14.15 0.00 1.94
6125 13109 5.454877 ACATTTAAAAAGTTCGCGCGTAAAA 59.545 32.000 30.98 16.17 0.00 1.52
6126 13110 4.968788 ACATTTAAAAAGTTCGCGCGTAAA 59.031 33.333 30.98 23.19 0.00 2.01
6127 13111 4.376279 CACATTTAAAAAGTTCGCGCGTAA 59.624 37.500 30.98 19.32 0.00 3.18
6128 13112 3.901290 CACATTTAAAAAGTTCGCGCGTA 59.099 39.130 30.98 19.09 0.00 4.42
6129 13113 2.717011 CACATTTAAAAAGTTCGCGCGT 59.283 40.909 30.98 11.22 0.00 6.01
6130 13114 2.088360 CCACATTTAAAAAGTTCGCGCG 59.912 45.455 26.76 26.76 0.00 6.86
6131 13115 3.301706 TCCACATTTAAAAAGTTCGCGC 58.698 40.909 0.00 0.00 0.00 6.86
6132 13116 5.209240 TCTTCCACATTTAAAAAGTTCGCG 58.791 37.500 0.00 0.00 0.00 5.87
6133 13117 7.637709 ATTCTTCCACATTTAAAAAGTTCGC 57.362 32.000 0.00 0.00 0.00 4.70
6160 13144 4.135306 TGTTCCCGTGCACTATGTAAAAA 58.865 39.130 16.19 0.00 0.00 1.94
6161 13145 3.741249 TGTTCCCGTGCACTATGTAAAA 58.259 40.909 16.19 0.00 0.00 1.52
6162 13146 3.404224 TGTTCCCGTGCACTATGTAAA 57.596 42.857 16.19 0.00 0.00 2.01
6163 13147 3.620427 ATGTTCCCGTGCACTATGTAA 57.380 42.857 16.19 0.00 0.00 2.41
6164 13148 3.620427 AATGTTCCCGTGCACTATGTA 57.380 42.857 16.19 0.00 0.00 2.29
6165 13149 2.489938 AATGTTCCCGTGCACTATGT 57.510 45.000 16.19 0.00 0.00 2.29
6166 13150 3.848272 AAAATGTTCCCGTGCACTATG 57.152 42.857 16.19 2.95 0.00 2.23
6186 13170 9.676195 CATGAATATTGTGACAAACTGTGTAAA 57.324 29.630 0.62 0.00 41.96 2.01
6187 13171 8.845227 ACATGAATATTGTGACAAACTGTGTAA 58.155 29.630 0.62 0.00 41.96 2.41
6188 13172 8.389779 ACATGAATATTGTGACAAACTGTGTA 57.610 30.769 0.62 0.00 41.96 2.90
6189 13173 7.275888 ACATGAATATTGTGACAAACTGTGT 57.724 32.000 0.62 0.73 45.74 3.72
6190 13174 8.578308 AAACATGAATATTGTGACAAACTGTG 57.422 30.769 0.62 0.11 0.00 3.66
6191 13175 9.598517 AAAAACATGAATATTGTGACAAACTGT 57.401 25.926 0.62 0.00 0.00 3.55
6215 13199 9.844790 CAGCATGAATAGTGTCAATAAAGAAAA 57.155 29.630 0.00 0.00 39.69 2.29


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.