Multiple sequence alignment - TraesCS4A01G373900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G373900 chr4A 100.000 3652 0 0 1 3652 648945608 648949259 0.000000e+00 6745.0
1 TraesCS4A01G373900 chr4A 82.222 360 45 16 3287 3637 686903528 686903877 3.570000e-75 292.0
2 TraesCS4A01G373900 chr4A 85.837 233 29 2 6 238 620646193 620646421 1.010000e-60 244.0
3 TraesCS4A01G373900 chr4A 78.462 130 25 3 1879 2007 440330050 440329923 8.410000e-12 82.4
4 TraesCS4A01G373900 chr4A 78.462 130 25 3 1879 2007 440337756 440337629 8.410000e-12 82.4
5 TraesCS4A01G373900 chr7A 91.254 2058 119 22 836 2862 41448296 41450323 0.000000e+00 2747.0
6 TraesCS4A01G373900 chr7A 86.837 547 52 5 3096 3639 41450514 41451043 8.730000e-166 593.0
7 TraesCS4A01G373900 chr7A 91.549 213 9 1 354 566 41447145 41447348 5.970000e-73 285.0
8 TraesCS4A01G373900 chr7A 86.296 270 13 13 578 843 41447502 41447751 4.650000e-69 272.0
9 TraesCS4A01G373900 chr7A 87.387 222 23 4 14 234 164671272 164671489 2.180000e-62 250.0
10 TraesCS4A01G373900 chr7A 87.013 77 5 2 3024 3096 41450322 41450397 8.410000e-12 82.4
11 TraesCS4A01G373900 chr7D 93.924 1580 69 7 1302 2862 41799399 41800970 0.000000e+00 2361.0
12 TraesCS4A01G373900 chr7D 87.450 749 37 25 567 1310 41794343 41795039 0.000000e+00 809.0
13 TraesCS4A01G373900 chr7D 88.948 561 53 5 3096 3652 41801137 41801692 0.000000e+00 684.0
14 TraesCS4A01G373900 chr7D 87.554 233 24 3 6 238 411597325 411597098 7.780000e-67 265.0
15 TraesCS4A01G373900 chr7D 90.141 71 7 0 3024 3094 41800969 41801039 3.880000e-15 93.5
16 TraesCS4A01G373900 chrUn 82.995 394 55 10 3235 3620 83311064 83311453 2.700000e-91 346.0
17 TraesCS4A01G373900 chrUn 83.117 231 32 5 6 234 33525017 33524792 1.720000e-48 204.0
18 TraesCS4A01G373900 chrUn 78.462 130 25 3 1879 2007 402791553 402791680 8.410000e-12 82.4
19 TraesCS4A01G373900 chr2A 81.068 412 59 17 3235 3639 770712135 770712534 9.850000e-81 311.0
20 TraesCS4A01G373900 chr2A 80.702 114 19 3 1895 2007 130619919 130619808 6.500000e-13 86.1
21 TraesCS4A01G373900 chr5A 79.091 440 72 19 3206 3639 450619316 450619741 5.970000e-73 285.0
22 TraesCS4A01G373900 chr5A 94.318 176 10 0 2860 3035 115664845 115664670 1.670000e-68 270.0
23 TraesCS4A01G373900 chr5A 93.820 178 11 0 2861 3038 439430416 439430239 6.010000e-68 268.0
24 TraesCS4A01G373900 chr5B 88.412 233 23 2 6 238 655631304 655631532 9.990000e-71 278.0
25 TraesCS4A01G373900 chr5B 94.286 175 9 1 2860 3034 43959397 43959224 2.160000e-67 267.0
26 TraesCS4A01G373900 chr5B 93.785 177 9 2 2849 3025 577516040 577516214 7.780000e-67 265.0
27 TraesCS4A01G373900 chr5B 86.957 230 23 4 6 233 700843886 700844110 6.050000e-63 252.0
28 TraesCS4A01G373900 chr3B 88.412 233 23 3 6 238 576622040 576622268 9.990000e-71 278.0
29 TraesCS4A01G373900 chr3B 78.676 136 26 3 1876 2010 814617129 814617262 1.810000e-13 87.9
30 TraesCS4A01G373900 chr3D 79.369 412 69 13 3234 3639 583331002 583330601 3.590000e-70 276.0
31 TraesCS4A01G373900 chr3D 79.221 385 59 14 3261 3639 472119511 472119142 7.830000e-62 248.0
32 TraesCS4A01G373900 chr4B 96.386 166 6 0 2860 3025 565737011 565737176 1.290000e-69 274.0
33 TraesCS4A01G373900 chr4B 95.294 170 8 0 2861 3030 71600624 71600793 1.670000e-68 270.0
34 TraesCS4A01G373900 chr3A 93.923 181 8 3 2860 3040 649812005 649811828 1.670000e-68 270.0
35 TraesCS4A01G373900 chr2B 95.294 170 8 0 2857 3026 174794818 174794987 1.670000e-68 270.0
36 TraesCS4A01G373900 chr2B 93.785 177 8 3 2860 3033 386595647 386595471 2.800000e-66 263.0
37 TraesCS4A01G373900 chr2B 79.699 133 25 2 1876 2007 567903245 567903376 1.080000e-15 95.3
38 TraesCS4A01G373900 chr2D 81.231 325 50 8 3245 3567 368629592 368629277 6.050000e-63 252.0
39 TraesCS4A01G373900 chr6A 80.906 309 53 4 3260 3565 317150441 317150746 4.710000e-59 239.0
40 TraesCS4A01G373900 chr5D 84.519 239 31 2 6 244 549226158 549226390 7.890000e-57 231.0
41 TraesCS4A01G373900 chr1D 84.232 241 32 4 6 244 338533351 338533587 2.840000e-56 230.0
42 TraesCS4A01G373900 chr1B 82.301 113 17 2 1895 2006 583411410 583411300 1.080000e-15 95.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G373900 chr4A 648945608 648949259 3651 False 6745.000000 6745 100.000000 1 3652 1 chr4A.!!$F2 3651
1 TraesCS4A01G373900 chr7A 41447145 41451043 3898 False 795.880000 2747 88.589800 354 3639 5 chr7A.!!$F2 3285
2 TraesCS4A01G373900 chr7D 41799399 41801692 2293 False 1046.166667 2361 91.004333 1302 3652 3 chr7D.!!$F2 2350
3 TraesCS4A01G373900 chr7D 41794343 41795039 696 False 809.000000 809 87.450000 567 1310 1 chr7D.!!$F1 743

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
170 171 0.034186 TGGATGCACCTTGGACCATC 60.034 55.0 0.0 12.35 39.86 3.51 F
1507 2216 0.040692 GGAGCGAACGGGACAAAAAC 60.041 55.0 0.0 0.00 0.00 2.43 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1571 2280 0.248743 GCGGTCATTATCGTCGGTGA 60.249 55.0 0.0 0.0 0.0 4.02 R
3248 4115 0.111061 TGCAGATGAGTTTGGGCACT 59.889 50.0 0.0 0.0 0.0 4.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 8.877779 GTTATGCTTATAGTCATCTTATGGCTG 58.122 37.037 4.31 0.00 46.32 4.85
32 33 6.670695 TGCTTATAGTCATCTTATGGCTGA 57.329 37.500 4.31 0.00 46.32 4.26
33 34 7.066307 TGCTTATAGTCATCTTATGGCTGAA 57.934 36.000 4.31 0.00 46.32 3.02
34 35 7.508687 TGCTTATAGTCATCTTATGGCTGAAA 58.491 34.615 4.31 0.00 46.32 2.69
35 36 8.159447 TGCTTATAGTCATCTTATGGCTGAAAT 58.841 33.333 4.31 0.00 46.32 2.17
36 37 9.007901 GCTTATAGTCATCTTATGGCTGAAATT 57.992 33.333 4.31 0.00 46.32 1.82
40 41 7.814264 AGTCATCTTATGGCTGAAATTAAGG 57.186 36.000 0.00 0.00 44.93 2.69
41 42 7.577303 AGTCATCTTATGGCTGAAATTAAGGA 58.423 34.615 0.00 0.00 44.93 3.36
42 43 7.718753 AGTCATCTTATGGCTGAAATTAAGGAG 59.281 37.037 0.00 0.00 44.93 3.69
43 44 7.500559 GTCATCTTATGGCTGAAATTAAGGAGT 59.499 37.037 0.00 0.00 30.66 3.85
44 45 8.055181 TCATCTTATGGCTGAAATTAAGGAGTT 58.945 33.333 0.00 0.00 0.00 3.01
45 46 7.630242 TCTTATGGCTGAAATTAAGGAGTTG 57.370 36.000 0.00 0.00 0.00 3.16
46 47 7.402054 TCTTATGGCTGAAATTAAGGAGTTGA 58.598 34.615 0.00 0.00 0.00 3.18
47 48 8.055181 TCTTATGGCTGAAATTAAGGAGTTGAT 58.945 33.333 0.00 0.00 0.00 2.57
48 49 5.902613 TGGCTGAAATTAAGGAGTTGATG 57.097 39.130 0.00 0.00 0.00 3.07
49 50 5.569355 TGGCTGAAATTAAGGAGTTGATGA 58.431 37.500 0.00 0.00 0.00 2.92
50 51 6.189859 TGGCTGAAATTAAGGAGTTGATGAT 58.810 36.000 0.00 0.00 0.00 2.45
51 52 7.345691 TGGCTGAAATTAAGGAGTTGATGATA 58.654 34.615 0.00 0.00 0.00 2.15
52 53 7.283127 TGGCTGAAATTAAGGAGTTGATGATAC 59.717 37.037 0.00 0.00 0.00 2.24
53 54 7.283127 GGCTGAAATTAAGGAGTTGATGATACA 59.717 37.037 0.00 0.00 0.00 2.29
54 55 8.341173 GCTGAAATTAAGGAGTTGATGATACAG 58.659 37.037 0.00 0.00 0.00 2.74
55 56 9.605275 CTGAAATTAAGGAGTTGATGATACAGA 57.395 33.333 0.00 0.00 0.00 3.41
60 61 9.722184 ATTAAGGAGTTGATGATACAGATGATG 57.278 33.333 0.00 0.00 0.00 3.07
61 62 6.744175 AGGAGTTGATGATACAGATGATGT 57.256 37.500 0.00 0.00 46.45 3.06
62 63 7.134362 AGGAGTTGATGATACAGATGATGTT 57.866 36.000 0.00 0.00 39.96 2.71
63 64 7.571919 AGGAGTTGATGATACAGATGATGTTT 58.428 34.615 0.00 0.00 39.96 2.83
64 65 8.708378 AGGAGTTGATGATACAGATGATGTTTA 58.292 33.333 0.00 0.00 39.96 2.01
65 66 8.768955 GGAGTTGATGATACAGATGATGTTTAC 58.231 37.037 0.00 0.00 39.96 2.01
66 67 9.539825 GAGTTGATGATACAGATGATGTTTACT 57.460 33.333 0.00 0.00 39.96 2.24
67 68 9.539825 AGTTGATGATACAGATGATGTTTACTC 57.460 33.333 0.00 0.00 39.96 2.59
68 69 8.768955 GTTGATGATACAGATGATGTTTACTCC 58.231 37.037 0.00 0.00 39.96 3.85
69 70 7.147976 TGATGATACAGATGATGTTTACTCCG 58.852 38.462 0.00 0.00 39.96 4.63
70 71 6.465439 TGATACAGATGATGTTTACTCCGT 57.535 37.500 0.00 0.00 39.96 4.69
71 72 7.576861 TGATACAGATGATGTTTACTCCGTA 57.423 36.000 0.00 0.00 39.96 4.02
72 73 7.649057 TGATACAGATGATGTTTACTCCGTAG 58.351 38.462 0.00 0.00 39.96 3.51
73 74 7.501225 TGATACAGATGATGTTTACTCCGTAGA 59.499 37.037 0.00 0.00 39.96 2.59
74 75 6.525578 ACAGATGATGTTTACTCCGTAGAA 57.474 37.500 0.00 0.00 39.96 2.10
75 76 6.565234 ACAGATGATGTTTACTCCGTAGAAG 58.435 40.000 0.00 0.00 39.96 2.85
76 77 6.153000 ACAGATGATGTTTACTCCGTAGAAGT 59.847 38.462 0.00 0.00 39.96 3.01
77 78 7.036220 CAGATGATGTTTACTCCGTAGAAGTT 58.964 38.462 0.00 0.00 0.00 2.66
78 79 8.188799 CAGATGATGTTTACTCCGTAGAAGTTA 58.811 37.037 0.00 0.00 0.00 2.24
79 80 8.746530 AGATGATGTTTACTCCGTAGAAGTTAA 58.253 33.333 0.00 0.00 0.00 2.01
80 81 9.530633 GATGATGTTTACTCCGTAGAAGTTAAT 57.469 33.333 0.00 0.00 0.00 1.40
81 82 9.886132 ATGATGTTTACTCCGTAGAAGTTAATT 57.114 29.630 0.00 0.00 0.00 1.40
84 85 9.813446 ATGTTTACTCCGTAGAAGTTAATTAGG 57.187 33.333 0.00 0.00 0.00 2.69
85 86 9.023962 TGTTTACTCCGTAGAAGTTAATTAGGA 57.976 33.333 0.00 0.00 0.00 2.94
86 87 9.860898 GTTTACTCCGTAGAAGTTAATTAGGAA 57.139 33.333 0.00 0.00 0.00 3.36
89 90 8.302515 ACTCCGTAGAAGTTAATTAGGAATCA 57.697 34.615 0.00 0.00 0.00 2.57
90 91 8.755977 ACTCCGTAGAAGTTAATTAGGAATCAA 58.244 33.333 0.00 0.00 0.00 2.57
91 92 9.595823 CTCCGTAGAAGTTAATTAGGAATCAAA 57.404 33.333 0.00 0.00 0.00 2.69
92 93 9.947433 TCCGTAGAAGTTAATTAGGAATCAAAA 57.053 29.630 0.00 0.00 0.00 2.44
103 104 6.677781 TTAGGAATCAAAATAGAGTTGCCG 57.322 37.500 0.00 0.00 0.00 5.69
104 105 4.843728 AGGAATCAAAATAGAGTTGCCGA 58.156 39.130 0.00 0.00 0.00 5.54
105 106 4.636206 AGGAATCAAAATAGAGTTGCCGAC 59.364 41.667 0.00 0.00 0.00 4.79
106 107 4.201920 GGAATCAAAATAGAGTTGCCGACC 60.202 45.833 0.00 0.00 0.00 4.79
107 108 3.410631 TCAAAATAGAGTTGCCGACCA 57.589 42.857 0.00 0.00 0.00 4.02
108 109 3.071479 TCAAAATAGAGTTGCCGACCAC 58.929 45.455 0.00 0.00 0.00 4.16
109 110 3.074412 CAAAATAGAGTTGCCGACCACT 58.926 45.455 0.00 0.00 0.00 4.00
110 111 3.418684 AAATAGAGTTGCCGACCACTT 57.581 42.857 0.00 0.00 0.00 3.16
111 112 2.386661 ATAGAGTTGCCGACCACTTG 57.613 50.000 0.00 0.00 0.00 3.16
112 113 1.334160 TAGAGTTGCCGACCACTTGA 58.666 50.000 0.00 0.00 0.00 3.02
113 114 0.249911 AGAGTTGCCGACCACTTGAC 60.250 55.000 0.00 0.00 0.00 3.18
114 115 0.531974 GAGTTGCCGACCACTTGACA 60.532 55.000 0.00 0.00 0.00 3.58
115 116 0.107410 AGTTGCCGACCACTTGACAA 60.107 50.000 0.00 0.00 0.00 3.18
116 117 0.736053 GTTGCCGACCACTTGACAAA 59.264 50.000 0.00 0.00 0.00 2.83
117 118 1.336755 GTTGCCGACCACTTGACAAAT 59.663 47.619 0.00 0.00 0.00 2.32
118 119 1.686355 TGCCGACCACTTGACAAATT 58.314 45.000 0.00 0.00 0.00 1.82
119 120 2.852449 TGCCGACCACTTGACAAATTA 58.148 42.857 0.00 0.00 0.00 1.40
120 121 3.417101 TGCCGACCACTTGACAAATTAT 58.583 40.909 0.00 0.00 0.00 1.28
121 122 4.580868 TGCCGACCACTTGACAAATTATA 58.419 39.130 0.00 0.00 0.00 0.98
122 123 4.634004 TGCCGACCACTTGACAAATTATAG 59.366 41.667 0.00 0.00 0.00 1.31
123 124 4.634443 GCCGACCACTTGACAAATTATAGT 59.366 41.667 0.00 0.00 0.00 2.12
124 125 5.220605 GCCGACCACTTGACAAATTATAGTC 60.221 44.000 0.00 0.00 35.37 2.59
125 126 5.005394 CCGACCACTTGACAAATTATAGTCG 59.995 44.000 0.00 0.00 42.07 4.18
126 127 5.575606 CGACCACTTGACAAATTATAGTCGT 59.424 40.000 0.00 0.00 38.73 4.34
127 128 6.748658 CGACCACTTGACAAATTATAGTCGTA 59.251 38.462 0.00 0.00 38.73 3.43
128 129 7.044249 CGACCACTTGACAAATTATAGTCGTAG 60.044 40.741 0.00 0.00 38.73 3.51
129 130 7.609056 ACCACTTGACAAATTATAGTCGTAGT 58.391 34.615 0.00 0.00 37.58 2.73
130 131 8.742777 ACCACTTGACAAATTATAGTCGTAGTA 58.257 33.333 10.22 0.00 37.58 1.82
131 132 9.745880 CCACTTGACAAATTATAGTCGTAGTAT 57.254 33.333 10.22 0.00 37.58 2.12
145 146 7.493743 AGTCGTAGTATAGAATGTACCACAG 57.506 40.000 0.00 0.00 0.00 3.66
146 147 6.017275 AGTCGTAGTATAGAATGTACCACAGC 60.017 42.308 0.00 0.00 0.00 4.40
147 148 6.017275 GTCGTAGTATAGAATGTACCACAGCT 60.017 42.308 0.00 0.00 0.00 4.24
148 149 6.017357 TCGTAGTATAGAATGTACCACAGCTG 60.017 42.308 13.48 13.48 0.00 4.24
149 150 6.238676 CGTAGTATAGAATGTACCACAGCTGT 60.239 42.308 15.25 15.25 0.00 4.40
150 151 5.907207 AGTATAGAATGTACCACAGCTGTG 58.093 41.667 35.15 35.15 45.23 3.66
151 152 4.826274 ATAGAATGTACCACAGCTGTGT 57.174 40.909 37.55 28.44 44.21 3.72
159 160 4.069869 ACAGCTGTGTGGATGCAC 57.930 55.556 20.97 10.90 34.75 4.57
160 161 1.601759 ACAGCTGTGTGGATGCACC 60.602 57.895 20.97 6.88 38.52 5.01
161 162 1.303074 CAGCTGTGTGGATGCACCT 60.303 57.895 15.34 1.29 38.52 4.00
162 163 0.892358 CAGCTGTGTGGATGCACCTT 60.892 55.000 15.34 0.00 38.52 3.50
163 164 0.892358 AGCTGTGTGGATGCACCTTG 60.892 55.000 15.34 5.64 38.52 3.61
164 165 1.870055 GCTGTGTGGATGCACCTTGG 61.870 60.000 15.34 3.90 38.52 3.61
165 166 0.250858 CTGTGTGGATGCACCTTGGA 60.251 55.000 15.34 0.00 38.52 3.53
166 167 0.537143 TGTGTGGATGCACCTTGGAC 60.537 55.000 15.34 6.37 38.52 4.02
167 168 1.074775 TGTGGATGCACCTTGGACC 59.925 57.895 15.34 0.00 39.86 4.46
168 169 1.074775 GTGGATGCACCTTGGACCA 59.925 57.895 5.98 0.00 39.86 4.02
169 170 0.323725 GTGGATGCACCTTGGACCAT 60.324 55.000 5.98 0.00 39.86 3.55
170 171 0.034186 TGGATGCACCTTGGACCATC 60.034 55.000 0.00 12.35 39.86 3.51
171 172 0.034186 GGATGCACCTTGGACCATCA 60.034 55.000 18.16 0.00 36.64 3.07
172 173 1.410648 GGATGCACCTTGGACCATCAT 60.411 52.381 18.16 0.00 36.64 2.45
173 174 1.679680 GATGCACCTTGGACCATCATG 59.320 52.381 0.00 0.00 35.38 3.07
174 175 0.405198 TGCACCTTGGACCATCATGT 59.595 50.000 0.00 0.00 0.00 3.21
175 176 1.632920 TGCACCTTGGACCATCATGTA 59.367 47.619 0.00 0.00 0.00 2.29
176 177 2.241941 TGCACCTTGGACCATCATGTAT 59.758 45.455 0.00 0.00 0.00 2.29
177 178 3.290710 GCACCTTGGACCATCATGTATT 58.709 45.455 0.00 0.00 0.00 1.89
178 179 3.067180 GCACCTTGGACCATCATGTATTG 59.933 47.826 0.00 0.00 0.00 1.90
179 180 4.525996 CACCTTGGACCATCATGTATTGA 58.474 43.478 0.00 0.00 39.12 2.57
180 181 4.577693 CACCTTGGACCATCATGTATTGAG 59.422 45.833 0.00 0.00 37.89 3.02
181 182 4.474651 ACCTTGGACCATCATGTATTGAGA 59.525 41.667 0.00 0.00 37.89 3.27
182 183 5.044919 ACCTTGGACCATCATGTATTGAGAA 60.045 40.000 0.00 0.00 37.89 2.87
183 184 6.066690 CCTTGGACCATCATGTATTGAGAAT 58.933 40.000 0.00 0.00 37.89 2.40
184 185 6.206243 CCTTGGACCATCATGTATTGAGAATC 59.794 42.308 0.00 0.00 37.89 2.52
185 186 6.505048 TGGACCATCATGTATTGAGAATCT 57.495 37.500 0.00 0.00 37.89 2.40
186 187 6.903516 TGGACCATCATGTATTGAGAATCTT 58.096 36.000 0.00 0.00 37.89 2.40
187 188 7.348815 TGGACCATCATGTATTGAGAATCTTT 58.651 34.615 0.00 0.00 37.89 2.52
188 189 7.835682 TGGACCATCATGTATTGAGAATCTTTT 59.164 33.333 0.00 0.00 37.89 2.27
189 190 9.342308 GGACCATCATGTATTGAGAATCTTTTA 57.658 33.333 0.00 0.00 37.89 1.52
191 192 9.125026 ACCATCATGTATTGAGAATCTTTTACC 57.875 33.333 0.00 0.00 37.89 2.85
192 193 9.347240 CCATCATGTATTGAGAATCTTTTACCT 57.653 33.333 0.00 0.00 37.89 3.08
195 196 9.823647 TCATGTATTGAGAATCTTTTACCTCTC 57.176 33.333 0.00 0.00 35.82 3.20
196 197 9.605275 CATGTATTGAGAATCTTTTACCTCTCA 57.395 33.333 0.00 0.00 41.89 3.27
200 201 7.969536 TTGAGAATCTTTTACCTCTCAACTG 57.030 36.000 8.82 0.00 45.43 3.16
201 202 7.067496 TGAGAATCTTTTACCTCTCAACTGT 57.933 36.000 0.00 0.00 40.94 3.55
202 203 8.190326 TGAGAATCTTTTACCTCTCAACTGTA 57.810 34.615 0.00 0.00 40.94 2.74
203 204 8.647796 TGAGAATCTTTTACCTCTCAACTGTAA 58.352 33.333 0.00 0.00 40.94 2.41
204 205 8.834749 AGAATCTTTTACCTCTCAACTGTAAC 57.165 34.615 0.00 0.00 0.00 2.50
205 206 8.652290 AGAATCTTTTACCTCTCAACTGTAACT 58.348 33.333 0.00 0.00 0.00 2.24
206 207 8.834749 AATCTTTTACCTCTCAACTGTAACTC 57.165 34.615 0.00 0.00 0.00 3.01
207 208 7.598759 TCTTTTACCTCTCAACTGTAACTCT 57.401 36.000 0.00 0.00 0.00 3.24
208 209 7.659186 TCTTTTACCTCTCAACTGTAACTCTC 58.341 38.462 0.00 0.00 0.00 3.20
209 210 7.506261 TCTTTTACCTCTCAACTGTAACTCTCT 59.494 37.037 0.00 0.00 0.00 3.10
210 211 8.701908 TTTTACCTCTCAACTGTAACTCTCTA 57.298 34.615 0.00 0.00 0.00 2.43
211 212 8.701908 TTTACCTCTCAACTGTAACTCTCTAA 57.298 34.615 0.00 0.00 0.00 2.10
212 213 8.701908 TTACCTCTCAACTGTAACTCTCTAAA 57.298 34.615 0.00 0.00 0.00 1.85
213 214 7.784470 ACCTCTCAACTGTAACTCTCTAAAT 57.216 36.000 0.00 0.00 0.00 1.40
214 215 8.880991 ACCTCTCAACTGTAACTCTCTAAATA 57.119 34.615 0.00 0.00 0.00 1.40
215 216 9.482175 ACCTCTCAACTGTAACTCTCTAAATAT 57.518 33.333 0.00 0.00 0.00 1.28
216 217 9.743057 CCTCTCAACTGTAACTCTCTAAATATG 57.257 37.037 0.00 0.00 0.00 1.78
217 218 9.743057 CTCTCAACTGTAACTCTCTAAATATGG 57.257 37.037 0.00 0.00 0.00 2.74
218 219 9.475620 TCTCAACTGTAACTCTCTAAATATGGA 57.524 33.333 0.00 0.00 0.00 3.41
268 269 8.973835 AGAGTTTGAATAAAGACTCTAGTTCG 57.026 34.615 3.24 0.00 45.05 3.95
269 270 7.542824 AGAGTTTGAATAAAGACTCTAGTTCGC 59.457 37.037 3.24 0.00 45.05 4.70
270 271 7.379750 AGTTTGAATAAAGACTCTAGTTCGCT 58.620 34.615 0.00 0.00 0.00 4.93
271 272 7.873505 AGTTTGAATAAAGACTCTAGTTCGCTT 59.126 33.333 0.00 0.00 0.00 4.68
272 273 9.136952 GTTTGAATAAAGACTCTAGTTCGCTTA 57.863 33.333 0.00 0.00 0.00 3.09
273 274 9.871238 TTTGAATAAAGACTCTAGTTCGCTTAT 57.129 29.630 0.00 0.00 0.00 1.73
301 302 7.770801 AAATAAAATAAAATTCGGAGCAGGC 57.229 32.000 0.00 0.00 0.00 4.85
302 303 4.799564 AAAATAAAATTCGGAGCAGGCA 57.200 36.364 0.00 0.00 0.00 4.75
303 304 4.799564 AAATAAAATTCGGAGCAGGCAA 57.200 36.364 0.00 0.00 0.00 4.52
304 305 5.343307 AAATAAAATTCGGAGCAGGCAAT 57.657 34.783 0.00 0.00 0.00 3.56
305 306 5.343307 AATAAAATTCGGAGCAGGCAATT 57.657 34.783 0.00 0.00 0.00 2.32
306 307 6.463995 AATAAAATTCGGAGCAGGCAATTA 57.536 33.333 0.00 0.00 0.00 1.40
307 308 3.782889 AAATTCGGAGCAGGCAATTAC 57.217 42.857 0.00 0.00 0.00 1.89
308 309 1.299541 ATTCGGAGCAGGCAATTACG 58.700 50.000 0.00 0.00 0.00 3.18
309 310 0.248012 TTCGGAGCAGGCAATTACGA 59.752 50.000 0.00 0.00 0.00 3.43
310 311 0.459585 TCGGAGCAGGCAATTACGAC 60.460 55.000 0.00 0.00 0.00 4.34
311 312 1.429148 CGGAGCAGGCAATTACGACC 61.429 60.000 0.00 0.00 0.00 4.79
312 313 0.107654 GGAGCAGGCAATTACGACCT 60.108 55.000 0.00 0.00 0.00 3.85
313 314 1.138266 GGAGCAGGCAATTACGACCTA 59.862 52.381 0.00 0.00 30.84 3.08
314 315 2.419574 GGAGCAGGCAATTACGACCTAA 60.420 50.000 0.00 0.00 30.84 2.69
315 316 3.267483 GAGCAGGCAATTACGACCTAAA 58.733 45.455 0.00 0.00 30.84 1.85
316 317 3.877508 GAGCAGGCAATTACGACCTAAAT 59.122 43.478 0.00 0.00 30.84 1.40
317 318 3.627577 AGCAGGCAATTACGACCTAAATG 59.372 43.478 0.00 0.00 30.84 2.32
318 319 3.792124 GCAGGCAATTACGACCTAAATGC 60.792 47.826 0.00 0.00 39.62 3.56
321 322 3.691498 GCAATTACGACCTAAATGCCAC 58.309 45.455 0.00 0.00 35.83 5.01
322 323 3.488553 GCAATTACGACCTAAATGCCACC 60.489 47.826 0.00 0.00 35.83 4.61
323 324 2.012937 TTACGACCTAAATGCCACCG 57.987 50.000 0.00 0.00 0.00 4.94
324 325 0.176219 TACGACCTAAATGCCACCGG 59.824 55.000 0.00 0.00 0.00 5.28
338 339 4.899239 CCGGCATCTCCACGCCTC 62.899 72.222 0.00 0.00 46.62 4.70
341 342 4.819761 GCATCTCCACGCCTCGCA 62.820 66.667 0.00 0.00 0.00 5.10
342 343 2.887568 CATCTCCACGCCTCGCAC 60.888 66.667 0.00 0.00 0.00 5.34
343 344 3.381983 ATCTCCACGCCTCGCACA 61.382 61.111 0.00 0.00 0.00 4.57
344 345 2.942796 ATCTCCACGCCTCGCACAA 61.943 57.895 0.00 0.00 0.00 3.33
345 346 2.449031 ATCTCCACGCCTCGCACAAA 62.449 55.000 0.00 0.00 0.00 2.83
346 347 2.203084 TCCACGCCTCGCACAAAA 60.203 55.556 0.00 0.00 0.00 2.44
347 348 1.781025 CTCCACGCCTCGCACAAAAA 61.781 55.000 0.00 0.00 0.00 1.94
393 394 3.554692 GGCGCTCGTTCCACATCG 61.555 66.667 7.64 0.00 0.00 3.84
394 395 2.506217 GCGCTCGTTCCACATCGA 60.506 61.111 0.00 0.00 34.88 3.59
395 396 2.789203 GCGCTCGTTCCACATCGAC 61.789 63.158 0.00 0.00 32.65 4.20
396 397 2.158959 CGCTCGTTCCACATCGACC 61.159 63.158 0.00 0.00 32.65 4.79
397 398 2.158959 GCTCGTTCCACATCGACCG 61.159 63.158 0.00 0.00 32.65 4.79
398 399 2.126228 TCGTTCCACATCGACCGC 60.126 61.111 0.00 0.00 0.00 5.68
399 400 2.431771 CGTTCCACATCGACCGCA 60.432 61.111 0.00 0.00 0.00 5.69
400 401 1.809619 CGTTCCACATCGACCGCAT 60.810 57.895 0.00 0.00 0.00 4.73
401 402 1.752501 CGTTCCACATCGACCGCATC 61.753 60.000 0.00 0.00 0.00 3.91
499 500 1.610327 GGCCCCTCTTCCTCCTTTC 59.390 63.158 0.00 0.00 0.00 2.62
506 507 1.209261 CTCTTCCTCCTTTCCCTCTGC 59.791 57.143 0.00 0.00 0.00 4.26
595 707 1.536766 TGTGCTGCTTACTGTGAATGC 59.463 47.619 0.00 0.00 0.00 3.56
624 771 5.744171 TGGATGAATTCTTGCTGCTTACTA 58.256 37.500 12.90 0.00 0.00 1.82
636 783 4.102996 TGCTGCTTACTATGAATGGATGGA 59.897 41.667 0.00 0.00 0.00 3.41
637 784 5.221986 TGCTGCTTACTATGAATGGATGGAT 60.222 40.000 0.00 0.00 0.00 3.41
638 785 5.123502 GCTGCTTACTATGAATGGATGGATG 59.876 44.000 0.00 0.00 0.00 3.51
639 786 5.563592 TGCTTACTATGAATGGATGGATGG 58.436 41.667 0.00 0.00 0.00 3.51
640 787 5.310331 TGCTTACTATGAATGGATGGATGGA 59.690 40.000 0.00 0.00 0.00 3.41
641 788 6.012245 TGCTTACTATGAATGGATGGATGGAT 60.012 38.462 0.00 0.00 0.00 3.41
642 789 6.318144 GCTTACTATGAATGGATGGATGGATG 59.682 42.308 0.00 0.00 0.00 3.51
643 790 5.188988 ACTATGAATGGATGGATGGATGG 57.811 43.478 0.00 0.00 0.00 3.51
644 791 4.853856 ACTATGAATGGATGGATGGATGGA 59.146 41.667 0.00 0.00 0.00 3.41
645 792 4.967209 ATGAATGGATGGATGGATGGAT 57.033 40.909 0.00 0.00 0.00 3.41
646 793 4.042271 TGAATGGATGGATGGATGGATG 57.958 45.455 0.00 0.00 0.00 3.51
647 794 3.658705 TGAATGGATGGATGGATGGATGA 59.341 43.478 0.00 0.00 0.00 2.92
654 805 5.416952 GGATGGATGGATGGATGAATGTTAC 59.583 44.000 0.00 0.00 0.00 2.50
657 808 6.533730 TGGATGGATGGATGAATGTTACTAC 58.466 40.000 0.00 0.00 0.00 2.73
886 1593 6.624352 TTCTTGCTAATGGATAGATGTTGC 57.376 37.500 0.00 0.00 33.04 4.17
903 1610 3.565482 TGTTGCAGATGGAGAAAGTCAAC 59.435 43.478 0.00 0.00 34.76 3.18
906 1613 2.413453 GCAGATGGAGAAAGTCAACGAC 59.587 50.000 0.00 0.00 0.00 4.34
1000 1707 2.656069 GCCGACCTAGCCAACTCCA 61.656 63.158 0.00 0.00 0.00 3.86
1068 1776 3.876320 GAGCATCTTCTTGGACCATCTTC 59.124 47.826 0.00 0.00 0.00 2.87
1095 1803 5.106673 CGATCTGCAGGTATTACGACATCTA 60.107 44.000 15.13 0.00 0.00 1.98
1131 1839 6.656632 TGATTATGAACCTGGTAGCTAGAG 57.343 41.667 0.00 0.00 0.00 2.43
1176 1884 4.607293 TGTAGCTCGATGGAAGCATTAT 57.393 40.909 0.00 0.00 0.00 1.28
1179 1887 4.077300 AGCTCGATGGAAGCATTATTGA 57.923 40.909 0.00 0.00 0.00 2.57
1183 1891 6.148480 AGCTCGATGGAAGCATTATTGATTAC 59.852 38.462 0.00 0.00 32.46 1.89
1185 1893 7.425577 TCGATGGAAGCATTATTGATTACTG 57.574 36.000 0.05 0.00 33.06 2.74
1187 1895 7.879677 TCGATGGAAGCATTATTGATTACTGAT 59.120 33.333 0.05 0.00 33.06 2.90
1188 1896 8.509690 CGATGGAAGCATTATTGATTACTGATT 58.490 33.333 0.05 0.00 33.06 2.57
1220 1928 2.259014 TTACTACTCCCCTTGGTCCC 57.741 55.000 0.00 0.00 0.00 4.46
1237 1945 3.522553 GTCCCGAATTAGTTGTCTCAGG 58.477 50.000 0.00 0.00 0.00 3.86
1240 1948 4.773674 TCCCGAATTAGTTGTCTCAGGTTA 59.226 41.667 0.00 0.00 0.00 2.85
1241 1949 5.424252 TCCCGAATTAGTTGTCTCAGGTTAT 59.576 40.000 0.00 0.00 0.00 1.89
1251 1959 6.155221 AGTTGTCTCAGGTTATTCTAGATGCA 59.845 38.462 0.00 0.00 0.00 3.96
1273 1981 6.039829 TGCAGATGTATCTAGACGACAAATCT 59.960 38.462 12.13 9.21 34.85 2.40
1283 1991 7.883217 TCTAGACGACAAATCTAAGACAACTT 58.117 34.615 0.00 0.00 39.81 2.66
1354 2063 6.918067 TTCTTGATCCTCTACTGAAACAGA 57.082 37.500 5.76 0.00 35.18 3.41
1382 2091 3.633418 TCTCTGAGCCCCTTAGAGTTAC 58.367 50.000 12.06 0.00 42.45 2.50
1398 2107 4.817464 AGAGTTACTCATTACGCTCTCGAT 59.183 41.667 15.23 0.00 34.60 3.59
1447 2156 1.490910 GAATGGGAAGAGGACGGGAAT 59.509 52.381 0.00 0.00 0.00 3.01
1460 2169 0.756442 CGGGAATGTGCAATGGGGAT 60.756 55.000 0.00 0.00 0.00 3.85
1507 2216 0.040692 GGAGCGAACGGGACAAAAAC 60.041 55.000 0.00 0.00 0.00 2.43
1518 2227 3.057315 CGGGACAAAAACAATCTGCTGAT 60.057 43.478 0.00 0.00 33.70 2.90
1571 2280 3.452627 CAGGCTGAGTATTACCTCCAAGT 59.547 47.826 9.42 0.00 0.00 3.16
1612 2321 3.495001 CAGAAACTTTGAAGACTCCGACC 59.505 47.826 0.00 0.00 0.00 4.79
1750 2459 2.162716 CGTCCTCGCTTTCCCTTTG 58.837 57.895 0.00 0.00 0.00 2.77
1862 2574 4.011966 TGCCTATGCATTCATGTAGGAG 57.988 45.455 13.99 0.00 44.23 3.69
1863 2575 3.392285 TGCCTATGCATTCATGTAGGAGT 59.608 43.478 13.99 0.00 44.23 3.85
1864 2576 4.592778 TGCCTATGCATTCATGTAGGAGTA 59.407 41.667 13.99 0.00 44.23 2.59
1900 2613 7.723109 ATTACTCCCTGGGTCCTAAATTAAT 57.277 36.000 13.56 0.05 0.00 1.40
1907 2620 6.423182 CCTGGGTCCTAAATTAATTGACTCA 58.577 40.000 15.27 15.27 35.30 3.41
1959 2672 9.632638 AGGCATGTTTTATTGTCTAGATACATT 57.367 29.630 0.00 0.00 0.00 2.71
1997 2710 5.305585 TCTGAGTCAGTTAATTTGGGACAC 58.694 41.667 19.53 0.00 32.55 3.67
2039 2752 7.129109 TGTATCTCCTTTTGAATCGTGTTTC 57.871 36.000 0.00 0.00 0.00 2.78
2142 2867 6.952358 CCCAGATGGAGATAATGGAATTGATT 59.048 38.462 0.00 0.00 35.21 2.57
2292 3017 3.716601 GTGTTTGTCACCCTTGATTTGG 58.283 45.455 0.00 0.00 40.84 3.28
2363 3088 2.159612 CGAAATCACTGCACACCATCAG 60.160 50.000 0.00 0.00 36.45 2.90
2371 3096 1.337728 TGCACACCATCAGTTCTACGG 60.338 52.381 0.00 0.00 0.00 4.02
2396 3121 5.064441 ACAAGAATGCCATGCTCTTTTAC 57.936 39.130 0.00 0.00 0.00 2.01
2417 3142 1.946768 TGTGAAGAAGGGAACAAAGCG 59.053 47.619 0.00 0.00 0.00 4.68
2459 3184 1.005394 ACTGTTACGGTCTTGGGCG 60.005 57.895 0.00 0.00 0.00 6.13
2522 3247 3.439476 TGAGCCTTCACGTCTCTACTAAC 59.561 47.826 3.26 0.00 0.00 2.34
2582 3310 1.134560 GGTGATCTTAGCTTCGACCGT 59.865 52.381 0.00 0.00 0.00 4.83
2611 3339 4.666928 ATGAAAAATCCATTTGCAACGC 57.333 36.364 0.00 0.00 40.02 4.84
2642 3370 2.622436 GCAGTTAAAGTGCGGATCTCT 58.378 47.619 0.00 0.00 34.53 3.10
2661 3389 4.710375 TCTCTTACGAGTAATTGCCCTCTT 59.290 41.667 0.00 0.00 38.45 2.85
2682 3410 5.298276 TCTTGAGGGAAATGTTGTGTTGTAC 59.702 40.000 0.00 0.00 0.00 2.90
2801 3547 5.066505 GGGACATGCCAATTTTCTACTACTG 59.933 44.000 8.20 0.00 38.95 2.74
2838 3584 3.902881 ACATTTGTTCCTTGCAAACCA 57.097 38.095 0.00 0.00 38.44 3.67
2853 3599 6.418057 TGCAAACCATAGGTTCAAAAAGAT 57.582 33.333 1.34 0.00 46.20 2.40
2862 3608 8.398665 CCATAGGTTCAAAAAGATAAGTGCTAC 58.601 37.037 0.00 0.00 0.00 3.58
2863 3609 9.167311 CATAGGTTCAAAAAGATAAGTGCTACT 57.833 33.333 0.00 0.00 0.00 2.57
2864 3610 7.674471 AGGTTCAAAAAGATAAGTGCTACTC 57.326 36.000 0.00 0.00 0.00 2.59
2865 3611 6.655425 AGGTTCAAAAAGATAAGTGCTACTCC 59.345 38.462 0.00 0.00 0.00 3.85
2866 3612 6.127980 GGTTCAAAAAGATAAGTGCTACTCCC 60.128 42.308 0.00 0.00 0.00 4.30
2867 3613 6.374417 TCAAAAAGATAAGTGCTACTCCCT 57.626 37.500 0.00 0.00 0.00 4.20
2868 3614 6.407202 TCAAAAAGATAAGTGCTACTCCCTC 58.593 40.000 0.00 0.00 0.00 4.30
2869 3615 5.360649 AAAAGATAAGTGCTACTCCCTCC 57.639 43.478 0.00 0.00 0.00 4.30
2870 3616 2.588620 AGATAAGTGCTACTCCCTCCG 58.411 52.381 0.00 0.00 0.00 4.63
2871 3617 2.091775 AGATAAGTGCTACTCCCTCCGT 60.092 50.000 0.00 0.00 0.00 4.69
2872 3618 2.226962 TAAGTGCTACTCCCTCCGTT 57.773 50.000 0.00 0.00 0.00 4.44
2873 3619 0.896226 AAGTGCTACTCCCTCCGTTC 59.104 55.000 0.00 0.00 0.00 3.95
2874 3620 0.971447 AGTGCTACTCCCTCCGTTCC 60.971 60.000 0.00 0.00 0.00 3.62
2875 3621 0.971447 GTGCTACTCCCTCCGTTCCT 60.971 60.000 0.00 0.00 0.00 3.36
2876 3622 0.627451 TGCTACTCCCTCCGTTCCTA 59.373 55.000 0.00 0.00 0.00 2.94
2877 3623 1.006281 TGCTACTCCCTCCGTTCCTAA 59.994 52.381 0.00 0.00 0.00 2.69
2878 3624 2.105766 GCTACTCCCTCCGTTCCTAAA 58.894 52.381 0.00 0.00 0.00 1.85
2879 3625 2.699321 GCTACTCCCTCCGTTCCTAAAT 59.301 50.000 0.00 0.00 0.00 1.40
2880 3626 3.893813 GCTACTCCCTCCGTTCCTAAATA 59.106 47.826 0.00 0.00 0.00 1.40
2881 3627 4.527427 GCTACTCCCTCCGTTCCTAAATAT 59.473 45.833 0.00 0.00 0.00 1.28
2882 3628 5.011840 GCTACTCCCTCCGTTCCTAAATATT 59.988 44.000 0.00 0.00 0.00 1.28
2883 3629 5.970501 ACTCCCTCCGTTCCTAAATATTT 57.029 39.130 5.89 5.89 0.00 1.40
2884 3630 5.681639 ACTCCCTCCGTTCCTAAATATTTG 58.318 41.667 11.05 1.40 0.00 2.32
2885 3631 5.191124 ACTCCCTCCGTTCCTAAATATTTGT 59.809 40.000 11.05 0.00 0.00 2.83
2886 3632 5.677567 TCCCTCCGTTCCTAAATATTTGTC 58.322 41.667 11.05 0.00 0.00 3.18
2887 3633 5.427481 TCCCTCCGTTCCTAAATATTTGTCT 59.573 40.000 11.05 0.00 0.00 3.41
2888 3634 6.069847 TCCCTCCGTTCCTAAATATTTGTCTT 60.070 38.462 11.05 0.00 0.00 3.01
2889 3635 6.602009 CCCTCCGTTCCTAAATATTTGTCTTT 59.398 38.462 11.05 0.00 0.00 2.52
2890 3636 7.201705 CCCTCCGTTCCTAAATATTTGTCTTTC 60.202 40.741 11.05 0.00 0.00 2.62
2891 3637 7.553044 CCTCCGTTCCTAAATATTTGTCTTTCT 59.447 37.037 11.05 0.00 0.00 2.52
2892 3638 9.595823 CTCCGTTCCTAAATATTTGTCTTTCTA 57.404 33.333 11.05 0.00 0.00 2.10
2893 3639 9.595823 TCCGTTCCTAAATATTTGTCTTTCTAG 57.404 33.333 11.05 0.00 0.00 2.43
2894 3640 9.595823 CCGTTCCTAAATATTTGTCTTTCTAGA 57.404 33.333 11.05 0.00 0.00 2.43
2923 3669 9.602568 TTTTAATAAATGACTACATACGGAGCA 57.397 29.630 0.00 0.00 35.50 4.26
2924 3670 9.602568 TTTAATAAATGACTACATACGGAGCAA 57.397 29.630 0.00 0.00 35.50 3.91
2925 3671 9.602568 TTAATAAATGACTACATACGGAGCAAA 57.397 29.630 0.00 0.00 35.50 3.68
2926 3672 7.715265 ATAAATGACTACATACGGAGCAAAG 57.285 36.000 0.00 0.00 35.50 2.77
2927 3673 4.737855 ATGACTACATACGGAGCAAAGT 57.262 40.909 0.00 0.00 34.71 2.66
2928 3674 3.845178 TGACTACATACGGAGCAAAGTG 58.155 45.455 0.00 0.00 0.00 3.16
2929 3675 3.508402 TGACTACATACGGAGCAAAGTGA 59.492 43.478 0.00 0.00 0.00 3.41
2930 3676 4.106197 GACTACATACGGAGCAAAGTGAG 58.894 47.826 0.00 0.00 0.00 3.51
2931 3677 3.510360 ACTACATACGGAGCAAAGTGAGT 59.490 43.478 0.00 0.00 0.00 3.41
2932 3678 2.688507 ACATACGGAGCAAAGTGAGTG 58.311 47.619 0.00 0.00 0.00 3.51
2933 3679 2.299013 ACATACGGAGCAAAGTGAGTGA 59.701 45.455 0.00 0.00 0.00 3.41
2934 3680 3.244078 ACATACGGAGCAAAGTGAGTGAA 60.244 43.478 0.00 0.00 0.00 3.18
2935 3681 2.550830 ACGGAGCAAAGTGAGTGAAT 57.449 45.000 0.00 0.00 0.00 2.57
2936 3682 2.417719 ACGGAGCAAAGTGAGTGAATC 58.582 47.619 0.00 0.00 0.00 2.52
2937 3683 1.734465 CGGAGCAAAGTGAGTGAATCC 59.266 52.381 0.00 0.00 0.00 3.01
2938 3684 2.783135 GGAGCAAAGTGAGTGAATCCA 58.217 47.619 0.00 0.00 0.00 3.41
2939 3685 2.485814 GGAGCAAAGTGAGTGAATCCAC 59.514 50.000 0.00 0.00 43.50 4.02
2940 3686 3.141398 GAGCAAAGTGAGTGAATCCACA 58.859 45.455 0.00 0.00 45.54 4.17
2941 3687 2.880890 AGCAAAGTGAGTGAATCCACAC 59.119 45.455 0.00 0.00 45.54 3.82
2954 3700 8.723942 AGTGAATCCACACTCTAAAATATGTC 57.276 34.615 0.00 0.00 46.36 3.06
2955 3701 8.543774 AGTGAATCCACACTCTAAAATATGTCT 58.456 33.333 0.00 0.00 46.36 3.41
2956 3702 9.817809 GTGAATCCACACTCTAAAATATGTCTA 57.182 33.333 0.00 0.00 42.72 2.59
2977 3723 9.511272 TGTCTATATACATTCGTATGTGGTAGT 57.489 33.333 16.91 2.71 44.56 2.73
2978 3724 9.985318 GTCTATATACATTCGTATGTGGTAGTC 57.015 37.037 16.91 9.92 44.56 2.59
2979 3725 9.170734 TCTATATACATTCGTATGTGGTAGTCC 57.829 37.037 16.91 0.00 44.56 3.85
2980 3726 7.770366 ATATACATTCGTATGTGGTAGTCCA 57.230 36.000 16.91 0.00 44.56 4.02
2981 3727 6.665992 ATACATTCGTATGTGGTAGTCCAT 57.334 37.500 16.91 0.00 44.56 3.41
2982 3728 5.353394 ACATTCGTATGTGGTAGTCCATT 57.647 39.130 6.89 0.00 46.20 3.16
2983 3729 5.741011 ACATTCGTATGTGGTAGTCCATTT 58.259 37.500 6.89 0.00 46.20 2.32
2984 3730 5.584649 ACATTCGTATGTGGTAGTCCATTTG 59.415 40.000 6.89 0.00 46.20 2.32
2985 3731 5.408880 TTCGTATGTGGTAGTCCATTTGA 57.591 39.130 0.00 0.00 46.20 2.69
2986 3732 5.408880 TCGTATGTGGTAGTCCATTTGAA 57.591 39.130 0.00 0.00 46.20 2.69
2987 3733 5.416083 TCGTATGTGGTAGTCCATTTGAAG 58.584 41.667 0.00 0.00 46.20 3.02
2988 3734 5.046878 TCGTATGTGGTAGTCCATTTGAAGT 60.047 40.000 0.00 0.00 46.20 3.01
2989 3735 5.291128 CGTATGTGGTAGTCCATTTGAAGTC 59.709 44.000 0.00 0.00 46.20 3.01
2990 3736 4.974645 TGTGGTAGTCCATTTGAAGTCT 57.025 40.909 0.00 0.00 46.20 3.24
2991 3737 4.894784 TGTGGTAGTCCATTTGAAGTCTC 58.105 43.478 0.00 0.00 46.20 3.36
2992 3738 4.593206 TGTGGTAGTCCATTTGAAGTCTCT 59.407 41.667 0.00 0.00 46.20 3.10
2993 3739 5.778241 TGTGGTAGTCCATTTGAAGTCTCTA 59.222 40.000 0.00 0.00 46.20 2.43
2994 3740 6.071334 TGTGGTAGTCCATTTGAAGTCTCTAG 60.071 42.308 0.00 0.00 46.20 2.43
2995 3741 6.153000 GTGGTAGTCCATTTGAAGTCTCTAGA 59.847 42.308 0.00 0.00 46.20 2.43
2996 3742 6.724441 TGGTAGTCCATTTGAAGTCTCTAGAA 59.276 38.462 0.00 0.00 39.03 2.10
2997 3743 7.234782 TGGTAGTCCATTTGAAGTCTCTAGAAA 59.765 37.037 0.00 0.00 39.03 2.52
2998 3744 7.762159 GGTAGTCCATTTGAAGTCTCTAGAAAG 59.238 40.741 0.00 0.00 0.00 2.62
2999 3745 7.546250 AGTCCATTTGAAGTCTCTAGAAAGA 57.454 36.000 0.00 0.00 0.00 2.52
3000 3746 7.382898 AGTCCATTTGAAGTCTCTAGAAAGAC 58.617 38.462 4.36 4.36 44.96 3.01
3001 3747 7.015682 AGTCCATTTGAAGTCTCTAGAAAGACA 59.984 37.037 13.05 0.02 46.65 3.41
3002 3748 7.657761 GTCCATTTGAAGTCTCTAGAAAGACAA 59.342 37.037 13.05 5.33 46.65 3.18
3003 3749 8.210946 TCCATTTGAAGTCTCTAGAAAGACAAA 58.789 33.333 13.05 12.10 46.65 2.83
3004 3750 9.007901 CCATTTGAAGTCTCTAGAAAGACAAAT 57.992 33.333 13.05 13.39 46.65 2.32
3016 3762 9.595823 TCTAGAAAGACAAATATTTAGGAACGG 57.404 33.333 0.00 0.00 0.00 4.44
3017 3763 9.595823 CTAGAAAGACAAATATTTAGGAACGGA 57.404 33.333 0.00 0.00 0.00 4.69
3018 3764 8.494016 AGAAAGACAAATATTTAGGAACGGAG 57.506 34.615 0.00 0.00 0.00 4.63
3019 3765 7.553044 AGAAAGACAAATATTTAGGAACGGAGG 59.447 37.037 0.00 0.00 0.00 4.30
3020 3766 5.681639 AGACAAATATTTAGGAACGGAGGG 58.318 41.667 0.00 0.00 0.00 4.30
3021 3767 5.427481 AGACAAATATTTAGGAACGGAGGGA 59.573 40.000 0.00 0.00 0.00 4.20
3022 3768 5.681639 ACAAATATTTAGGAACGGAGGGAG 58.318 41.667 0.00 0.00 0.00 4.30
3023 3769 5.191124 ACAAATATTTAGGAACGGAGGGAGT 59.809 40.000 0.00 0.00 0.00 3.85
3024 3770 6.384886 ACAAATATTTAGGAACGGAGGGAGTA 59.615 38.462 0.00 0.00 0.00 2.59
3027 3773 8.912614 AATATTTAGGAACGGAGGGAGTATAT 57.087 34.615 0.00 0.00 0.00 0.86
3046 3792 9.862371 GAGTATATTATAGTTGACCACCATCAG 57.138 37.037 0.00 0.00 0.00 2.90
3050 3796 4.679373 ATAGTTGACCACCATCAGCTAG 57.321 45.455 5.72 0.00 43.13 3.42
3053 3799 3.521126 AGTTGACCACCATCAGCTAGAAT 59.479 43.478 0.00 0.00 38.27 2.40
3090 3840 2.680841 CGTCCGAAATAATTCAAGGCCA 59.319 45.455 5.01 0.00 35.15 5.36
3163 4030 9.045223 CGGAGATAAATATTTCACAGTTCATGA 57.955 33.333 3.39 0.00 0.00 3.07
3241 4108 2.567615 GGAGGAACCAACTAGAGAGCAA 59.432 50.000 0.00 0.00 38.79 3.91
3243 4110 2.972713 AGGAACCAACTAGAGAGCAACA 59.027 45.455 0.00 0.00 0.00 3.33
3248 4115 4.973168 ACCAACTAGAGAGCAACAATTCA 58.027 39.130 0.00 0.00 0.00 2.57
3256 4123 1.340889 GAGCAACAATTCAGTGCCCAA 59.659 47.619 1.81 0.00 0.00 4.12
3269 4136 0.178995 TGCCCAAACTCATCTGCACA 60.179 50.000 0.00 0.00 0.00 4.57
3272 4139 1.475280 CCCAAACTCATCTGCACATGG 59.525 52.381 1.87 0.00 0.00 3.66
3341 4210 5.537188 TCCAATTTGTTTTGCATGGTAGAC 58.463 37.500 0.00 0.00 0.00 2.59
3354 4223 2.710377 TGGTAGACAATTTGATGCGCT 58.290 42.857 9.73 0.00 0.00 5.92
3402 4271 2.092914 TGGACATCTGAGTAGCTCTCGA 60.093 50.000 0.00 0.29 45.46 4.04
3469 4339 9.859152 TCATGTATTGTCATGACCCAATTTATA 57.141 29.630 22.85 6.67 45.89 0.98
3482 4355 8.811017 TGACCCAATTTATATTTTTGCTGAGAA 58.189 29.630 0.00 0.00 0.00 2.87
3503 4376 8.948631 GAGAACTACTCATATGTCCAAATGAA 57.051 34.615 1.90 0.00 44.36 2.57
3540 4413 4.887071 TGTACCTCACATGCCAAATTATCC 59.113 41.667 0.00 0.00 30.04 2.59
3639 4512 4.699257 GCCTAGGCTCAGAAATGGATATTG 59.301 45.833 27.17 0.00 38.26 1.90
3641 4514 5.013495 CCTAGGCTCAGAAATGGATATTGGA 59.987 44.000 0.00 0.00 0.00 3.53
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 8.820831 AGCCATAAGATGACTATAAGCATAACT 58.179 33.333 0.00 0.00 0.00 2.24
5 6 8.877779 CAGCCATAAGATGACTATAAGCATAAC 58.122 37.037 0.00 0.00 0.00 1.89
6 7 8.815912 TCAGCCATAAGATGACTATAAGCATAA 58.184 33.333 0.00 0.00 0.00 1.90
7 8 8.366359 TCAGCCATAAGATGACTATAAGCATA 57.634 34.615 0.00 0.00 0.00 3.14
8 9 7.250032 TCAGCCATAAGATGACTATAAGCAT 57.750 36.000 0.00 0.00 0.00 3.79
9 10 6.670695 TCAGCCATAAGATGACTATAAGCA 57.329 37.500 0.00 0.00 0.00 3.91
10 11 7.969536 TTTCAGCCATAAGATGACTATAAGC 57.030 36.000 0.00 0.00 0.00 3.09
14 15 9.512588 CCTTAATTTCAGCCATAAGATGACTAT 57.487 33.333 0.00 0.00 0.00 2.12
15 16 8.713971 TCCTTAATTTCAGCCATAAGATGACTA 58.286 33.333 0.00 0.00 0.00 2.59
16 17 7.577303 TCCTTAATTTCAGCCATAAGATGACT 58.423 34.615 0.00 0.00 0.00 3.41
17 18 7.500559 ACTCCTTAATTTCAGCCATAAGATGAC 59.499 37.037 0.00 0.00 0.00 3.06
18 19 7.577303 ACTCCTTAATTTCAGCCATAAGATGA 58.423 34.615 0.00 0.00 0.00 2.92
19 20 7.814264 ACTCCTTAATTTCAGCCATAAGATG 57.186 36.000 0.00 0.00 0.00 2.90
20 21 8.055181 TCAACTCCTTAATTTCAGCCATAAGAT 58.945 33.333 0.00 0.00 0.00 2.40
21 22 7.402054 TCAACTCCTTAATTTCAGCCATAAGA 58.598 34.615 0.00 0.00 0.00 2.10
22 23 7.630242 TCAACTCCTTAATTTCAGCCATAAG 57.370 36.000 0.00 0.00 0.00 1.73
23 24 7.833682 TCATCAACTCCTTAATTTCAGCCATAA 59.166 33.333 0.00 0.00 0.00 1.90
24 25 7.345691 TCATCAACTCCTTAATTTCAGCCATA 58.654 34.615 0.00 0.00 0.00 2.74
25 26 6.189859 TCATCAACTCCTTAATTTCAGCCAT 58.810 36.000 0.00 0.00 0.00 4.40
26 27 5.569355 TCATCAACTCCTTAATTTCAGCCA 58.431 37.500 0.00 0.00 0.00 4.75
27 28 6.705863 ATCATCAACTCCTTAATTTCAGCC 57.294 37.500 0.00 0.00 0.00 4.85
28 29 8.213518 TGTATCATCAACTCCTTAATTTCAGC 57.786 34.615 0.00 0.00 0.00 4.26
29 30 9.605275 TCTGTATCATCAACTCCTTAATTTCAG 57.395 33.333 0.00 0.00 0.00 3.02
34 35 9.722184 CATCATCTGTATCATCAACTCCTTAAT 57.278 33.333 0.00 0.00 0.00 1.40
35 36 8.708378 ACATCATCTGTATCATCAACTCCTTAA 58.292 33.333 0.00 0.00 35.91 1.85
36 37 8.255111 ACATCATCTGTATCATCAACTCCTTA 57.745 34.615 0.00 0.00 35.91 2.69
37 38 7.134362 ACATCATCTGTATCATCAACTCCTT 57.866 36.000 0.00 0.00 35.91 3.36
38 39 6.744175 ACATCATCTGTATCATCAACTCCT 57.256 37.500 0.00 0.00 35.91 3.69
39 40 7.798596 AAACATCATCTGTATCATCAACTCC 57.201 36.000 0.00 0.00 36.98 3.85
40 41 9.539825 AGTAAACATCATCTGTATCATCAACTC 57.460 33.333 0.00 0.00 36.98 3.01
41 42 9.539825 GAGTAAACATCATCTGTATCATCAACT 57.460 33.333 0.00 0.00 36.98 3.16
42 43 8.768955 GGAGTAAACATCATCTGTATCATCAAC 58.231 37.037 0.00 0.00 36.98 3.18
43 44 7.653311 CGGAGTAAACATCATCTGTATCATCAA 59.347 37.037 0.00 0.00 36.98 2.57
44 45 7.147976 CGGAGTAAACATCATCTGTATCATCA 58.852 38.462 0.00 0.00 36.98 3.07
45 46 7.148641 ACGGAGTAAACATCATCTGTATCATC 58.851 38.462 0.00 0.00 41.94 2.92
46 47 7.055667 ACGGAGTAAACATCATCTGTATCAT 57.944 36.000 0.00 0.00 41.94 2.45
47 48 6.465439 ACGGAGTAAACATCATCTGTATCA 57.535 37.500 0.00 0.00 41.94 2.15
48 49 7.872881 TCTACGGAGTAAACATCATCTGTATC 58.127 38.462 0.00 0.00 45.13 2.24
49 50 7.818997 TCTACGGAGTAAACATCATCTGTAT 57.181 36.000 0.00 0.00 45.13 2.29
50 51 7.338703 ACTTCTACGGAGTAAACATCATCTGTA 59.661 37.037 0.00 0.00 45.13 2.74
51 52 6.153000 ACTTCTACGGAGTAAACATCATCTGT 59.847 38.462 0.00 0.00 45.13 3.41
52 53 6.565234 ACTTCTACGGAGTAAACATCATCTG 58.435 40.000 0.00 0.00 45.13 2.90
53 54 6.777213 ACTTCTACGGAGTAAACATCATCT 57.223 37.500 0.00 0.00 45.13 2.90
54 55 8.922058 TTAACTTCTACGGAGTAAACATCATC 57.078 34.615 0.00 0.00 45.13 2.92
55 56 9.886132 AATTAACTTCTACGGAGTAAACATCAT 57.114 29.630 0.00 0.00 45.13 2.45
58 59 9.813446 CCTAATTAACTTCTACGGAGTAAACAT 57.187 33.333 0.00 0.00 45.13 2.71
59 60 9.023962 TCCTAATTAACTTCTACGGAGTAAACA 57.976 33.333 0.00 0.00 45.13 2.83
60 61 9.860898 TTCCTAATTAACTTCTACGGAGTAAAC 57.139 33.333 0.00 0.00 45.13 2.01
63 64 9.412460 TGATTCCTAATTAACTTCTACGGAGTA 57.588 33.333 0.00 0.00 45.11 2.59
65 66 9.595823 TTTGATTCCTAATTAACTTCTACGGAG 57.404 33.333 0.00 0.00 0.00 4.63
66 67 9.947433 TTTTGATTCCTAATTAACTTCTACGGA 57.053 29.630 0.00 0.00 0.00 4.69
77 78 8.836413 CGGCAACTCTATTTTGATTCCTAATTA 58.164 33.333 0.00 0.00 0.00 1.40
78 79 7.556275 TCGGCAACTCTATTTTGATTCCTAATT 59.444 33.333 0.00 0.00 0.00 1.40
79 80 7.012421 GTCGGCAACTCTATTTTGATTCCTAAT 59.988 37.037 0.00 0.00 0.00 1.73
80 81 6.315393 GTCGGCAACTCTATTTTGATTCCTAA 59.685 38.462 0.00 0.00 0.00 2.69
81 82 5.815740 GTCGGCAACTCTATTTTGATTCCTA 59.184 40.000 0.00 0.00 0.00 2.94
82 83 4.636206 GTCGGCAACTCTATTTTGATTCCT 59.364 41.667 0.00 0.00 0.00 3.36
83 84 4.201920 GGTCGGCAACTCTATTTTGATTCC 60.202 45.833 0.00 0.00 0.00 3.01
84 85 4.394920 TGGTCGGCAACTCTATTTTGATTC 59.605 41.667 0.00 0.00 0.00 2.52
85 86 4.156008 GTGGTCGGCAACTCTATTTTGATT 59.844 41.667 0.00 0.00 0.00 2.57
86 87 3.689649 GTGGTCGGCAACTCTATTTTGAT 59.310 43.478 0.00 0.00 0.00 2.57
87 88 3.071479 GTGGTCGGCAACTCTATTTTGA 58.929 45.455 0.00 0.00 0.00 2.69
88 89 3.074412 AGTGGTCGGCAACTCTATTTTG 58.926 45.455 0.00 0.00 0.00 2.44
89 90 3.418684 AGTGGTCGGCAACTCTATTTT 57.581 42.857 0.00 0.00 0.00 1.82
90 91 3.074412 CAAGTGGTCGGCAACTCTATTT 58.926 45.455 0.00 0.00 0.00 1.40
91 92 2.301870 TCAAGTGGTCGGCAACTCTATT 59.698 45.455 0.00 0.00 0.00 1.73
92 93 1.899814 TCAAGTGGTCGGCAACTCTAT 59.100 47.619 0.00 0.00 0.00 1.98
93 94 1.000506 GTCAAGTGGTCGGCAACTCTA 59.999 52.381 0.00 0.00 0.00 2.43
94 95 0.249911 GTCAAGTGGTCGGCAACTCT 60.250 55.000 0.00 0.00 0.00 3.24
95 96 0.531974 TGTCAAGTGGTCGGCAACTC 60.532 55.000 0.00 0.00 0.00 3.01
96 97 0.107410 TTGTCAAGTGGTCGGCAACT 60.107 50.000 0.00 0.00 0.00 3.16
97 98 0.736053 TTTGTCAAGTGGTCGGCAAC 59.264 50.000 0.00 0.00 0.00 4.17
98 99 1.686355 ATTTGTCAAGTGGTCGGCAA 58.314 45.000 0.00 0.00 0.00 4.52
99 100 1.686355 AATTTGTCAAGTGGTCGGCA 58.314 45.000 0.00 0.00 0.00 5.69
100 101 4.634443 ACTATAATTTGTCAAGTGGTCGGC 59.366 41.667 0.00 0.00 0.00 5.54
101 102 5.005394 CGACTATAATTTGTCAAGTGGTCGG 59.995 44.000 14.49 3.87 39.00 4.79
102 103 5.575606 ACGACTATAATTTGTCAAGTGGTCG 59.424 40.000 17.81 17.81 45.08 4.79
103 104 6.963049 ACGACTATAATTTGTCAAGTGGTC 57.037 37.500 0.00 0.00 33.18 4.02
104 105 7.609056 ACTACGACTATAATTTGTCAAGTGGT 58.391 34.615 0.00 0.00 34.24 4.16
105 106 9.745880 ATACTACGACTATAATTTGTCAAGTGG 57.254 33.333 14.23 0.00 33.78 4.00
119 120 9.217278 CTGTGGTACATTCTATACTACGACTAT 57.783 37.037 0.00 0.00 44.52 2.12
120 121 7.172190 GCTGTGGTACATTCTATACTACGACTA 59.828 40.741 0.00 0.00 44.52 2.59
121 122 6.017275 GCTGTGGTACATTCTATACTACGACT 60.017 42.308 0.00 0.00 44.52 4.18
122 123 6.017275 AGCTGTGGTACATTCTATACTACGAC 60.017 42.308 0.00 0.00 44.52 4.34
123 124 6.017357 CAGCTGTGGTACATTCTATACTACGA 60.017 42.308 5.25 0.00 44.52 3.43
124 125 6.143496 CAGCTGTGGTACATTCTATACTACG 58.857 44.000 5.25 0.00 44.52 3.51
125 126 6.918569 CACAGCTGTGGTACATTCTATACTAC 59.081 42.308 34.65 0.00 44.52 2.73
126 127 7.039313 CACAGCTGTGGTACATTCTATACTA 57.961 40.000 34.65 0.00 44.52 1.82
127 128 5.907207 CACAGCTGTGGTACATTCTATACT 58.093 41.667 34.65 0.00 44.52 2.12
142 143 1.601759 GGTGCATCCACACAGCTGT 60.602 57.895 15.25 15.25 43.88 4.40
143 144 0.892358 AAGGTGCATCCACACAGCTG 60.892 55.000 13.48 13.48 43.44 4.24
144 145 0.892358 CAAGGTGCATCCACACAGCT 60.892 55.000 0.00 0.00 46.01 4.24
145 146 1.582968 CAAGGTGCATCCACACAGC 59.417 57.895 0.00 0.00 43.88 4.40
146 147 0.250858 TCCAAGGTGCATCCACACAG 60.251 55.000 0.00 0.00 43.88 3.66
147 148 0.537143 GTCCAAGGTGCATCCACACA 60.537 55.000 0.00 0.00 43.88 3.72
148 149 1.244019 GGTCCAAGGTGCATCCACAC 61.244 60.000 0.00 0.00 43.88 3.82
149 150 1.074775 GGTCCAAGGTGCATCCACA 59.925 57.895 0.00 0.00 43.88 4.17
150 151 0.323725 ATGGTCCAAGGTGCATCCAC 60.324 55.000 0.00 0.00 41.32 4.02
151 152 0.034186 GATGGTCCAAGGTGCATCCA 60.034 55.000 0.00 0.00 39.02 3.41
152 153 0.034186 TGATGGTCCAAGGTGCATCC 60.034 55.000 0.00 0.00 0.00 3.51
153 154 1.679680 CATGATGGTCCAAGGTGCATC 59.320 52.381 0.00 0.00 0.00 3.91
154 155 1.006281 ACATGATGGTCCAAGGTGCAT 59.994 47.619 0.00 0.00 0.00 3.96
155 156 0.405198 ACATGATGGTCCAAGGTGCA 59.595 50.000 0.00 0.00 0.00 4.57
156 157 2.418368 TACATGATGGTCCAAGGTGC 57.582 50.000 0.00 0.00 0.00 5.01
157 158 4.525996 TCAATACATGATGGTCCAAGGTG 58.474 43.478 0.00 0.00 31.50 4.00
158 159 4.474651 TCTCAATACATGATGGTCCAAGGT 59.525 41.667 0.00 0.00 37.44 3.50
159 160 5.039920 TCTCAATACATGATGGTCCAAGG 57.960 43.478 0.00 0.00 37.44 3.61
160 161 6.996879 AGATTCTCAATACATGATGGTCCAAG 59.003 38.462 0.00 0.00 37.44 3.61
161 162 6.903516 AGATTCTCAATACATGATGGTCCAA 58.096 36.000 0.00 0.00 37.44 3.53
162 163 6.505048 AGATTCTCAATACATGATGGTCCA 57.495 37.500 0.00 0.00 37.44 4.02
163 164 7.814264 AAAGATTCTCAATACATGATGGTCC 57.186 36.000 0.00 0.00 37.44 4.46
165 166 9.125026 GGTAAAAGATTCTCAATACATGATGGT 57.875 33.333 0.00 0.00 37.44 3.55
166 167 9.347240 AGGTAAAAGATTCTCAATACATGATGG 57.653 33.333 0.00 0.00 37.44 3.51
169 170 9.823647 GAGAGGTAAAAGATTCTCAATACATGA 57.176 33.333 0.00 0.00 36.83 3.07
170 171 9.605275 TGAGAGGTAAAAGATTCTCAATACATG 57.395 33.333 0.89 0.00 42.08 3.21
177 178 7.067496 ACAGTTGAGAGGTAAAAGATTCTCA 57.933 36.000 0.00 0.00 43.00 3.27
178 179 8.927721 GTTACAGTTGAGAGGTAAAAGATTCTC 58.072 37.037 0.00 0.00 37.24 2.87
179 180 8.652290 AGTTACAGTTGAGAGGTAAAAGATTCT 58.348 33.333 0.00 0.00 0.00 2.40
180 181 8.834749 AGTTACAGTTGAGAGGTAAAAGATTC 57.165 34.615 0.00 0.00 0.00 2.52
181 182 8.652290 AGAGTTACAGTTGAGAGGTAAAAGATT 58.348 33.333 0.00 0.00 0.00 2.40
182 183 8.196378 AGAGTTACAGTTGAGAGGTAAAAGAT 57.804 34.615 0.00 0.00 0.00 2.40
183 184 7.506261 AGAGAGTTACAGTTGAGAGGTAAAAGA 59.494 37.037 0.00 0.00 0.00 2.52
184 185 7.662897 AGAGAGTTACAGTTGAGAGGTAAAAG 58.337 38.462 0.00 0.00 0.00 2.27
185 186 7.598759 AGAGAGTTACAGTTGAGAGGTAAAA 57.401 36.000 0.00 0.00 0.00 1.52
186 187 8.701908 TTAGAGAGTTACAGTTGAGAGGTAAA 57.298 34.615 0.00 0.00 0.00 2.01
187 188 8.701908 TTTAGAGAGTTACAGTTGAGAGGTAA 57.298 34.615 0.00 0.00 0.00 2.85
188 189 8.880991 ATTTAGAGAGTTACAGTTGAGAGGTA 57.119 34.615 0.00 0.00 0.00 3.08
189 190 7.784470 ATTTAGAGAGTTACAGTTGAGAGGT 57.216 36.000 0.00 0.00 0.00 3.85
190 191 9.743057 CATATTTAGAGAGTTACAGTTGAGAGG 57.257 37.037 0.00 0.00 0.00 3.69
191 192 9.743057 CCATATTTAGAGAGTTACAGTTGAGAG 57.257 37.037 0.00 0.00 0.00 3.20
192 193 9.475620 TCCATATTTAGAGAGTTACAGTTGAGA 57.524 33.333 0.00 0.00 0.00 3.27
242 243 9.413048 CGAACTAGAGTCTTTATTCAAACTCTT 57.587 33.333 8.96 0.00 44.57 2.85
244 245 7.542824 AGCGAACTAGAGTCTTTATTCAAACTC 59.457 37.037 0.00 0.00 38.71 3.01
245 246 7.379750 AGCGAACTAGAGTCTTTATTCAAACT 58.620 34.615 0.00 0.00 0.00 2.66
246 247 7.583860 AGCGAACTAGAGTCTTTATTCAAAC 57.416 36.000 0.00 0.00 0.00 2.93
247 248 9.871238 ATAAGCGAACTAGAGTCTTTATTCAAA 57.129 29.630 0.00 0.00 0.00 2.69
275 276 8.664798 GCCTGCTCCGAATTTTATTTTATTTTT 58.335 29.630 0.00 0.00 0.00 1.94
276 277 7.821846 TGCCTGCTCCGAATTTTATTTTATTTT 59.178 29.630 0.00 0.00 0.00 1.82
277 278 7.327214 TGCCTGCTCCGAATTTTATTTTATTT 58.673 30.769 0.00 0.00 0.00 1.40
278 279 6.872920 TGCCTGCTCCGAATTTTATTTTATT 58.127 32.000 0.00 0.00 0.00 1.40
279 280 6.463995 TGCCTGCTCCGAATTTTATTTTAT 57.536 33.333 0.00 0.00 0.00 1.40
280 281 5.906113 TGCCTGCTCCGAATTTTATTTTA 57.094 34.783 0.00 0.00 0.00 1.52
281 282 4.799564 TGCCTGCTCCGAATTTTATTTT 57.200 36.364 0.00 0.00 0.00 1.82
282 283 4.799564 TTGCCTGCTCCGAATTTTATTT 57.200 36.364 0.00 0.00 0.00 1.40
283 284 5.343307 AATTGCCTGCTCCGAATTTTATT 57.657 34.783 0.00 0.00 0.00 1.40
284 285 5.505654 CGTAATTGCCTGCTCCGAATTTTAT 60.506 40.000 0.00 0.00 0.00 1.40
285 286 4.201871 CGTAATTGCCTGCTCCGAATTTTA 60.202 41.667 0.00 0.00 0.00 1.52
286 287 3.427503 CGTAATTGCCTGCTCCGAATTTT 60.428 43.478 0.00 0.00 0.00 1.82
287 288 2.097466 CGTAATTGCCTGCTCCGAATTT 59.903 45.455 0.00 0.00 0.00 1.82
288 289 1.670811 CGTAATTGCCTGCTCCGAATT 59.329 47.619 0.00 0.00 0.00 2.17
289 290 1.134521 TCGTAATTGCCTGCTCCGAAT 60.135 47.619 0.00 0.00 0.00 3.34
290 291 0.248012 TCGTAATTGCCTGCTCCGAA 59.752 50.000 0.00 0.00 0.00 4.30
291 292 0.459585 GTCGTAATTGCCTGCTCCGA 60.460 55.000 0.00 0.00 0.00 4.55
292 293 1.429148 GGTCGTAATTGCCTGCTCCG 61.429 60.000 0.00 0.00 0.00 4.63
293 294 0.107654 AGGTCGTAATTGCCTGCTCC 60.108 55.000 0.00 0.00 0.00 4.70
294 295 2.596904 TAGGTCGTAATTGCCTGCTC 57.403 50.000 0.00 0.00 34.07 4.26
295 296 3.343941 TTTAGGTCGTAATTGCCTGCT 57.656 42.857 0.00 0.00 34.07 4.24
296 297 3.792124 GCATTTAGGTCGTAATTGCCTGC 60.792 47.826 16.08 5.37 40.11 4.85
297 298 3.952535 GCATTTAGGTCGTAATTGCCTG 58.047 45.455 16.08 0.70 40.11 4.85
300 301 3.488553 GGTGGCATTTAGGTCGTAATTGC 60.489 47.826 17.67 17.67 43.09 3.56
301 302 3.242608 CGGTGGCATTTAGGTCGTAATTG 60.243 47.826 0.00 3.81 0.00 2.32
302 303 2.940410 CGGTGGCATTTAGGTCGTAATT 59.060 45.455 0.00 0.00 0.00 1.40
303 304 2.557317 CGGTGGCATTTAGGTCGTAAT 58.443 47.619 0.00 0.00 0.00 1.89
304 305 1.405797 CCGGTGGCATTTAGGTCGTAA 60.406 52.381 0.00 0.00 0.00 3.18
305 306 0.176219 CCGGTGGCATTTAGGTCGTA 59.824 55.000 0.00 0.00 0.00 3.43
306 307 1.078708 CCGGTGGCATTTAGGTCGT 60.079 57.895 0.00 0.00 0.00 4.34
307 308 3.808036 CCGGTGGCATTTAGGTCG 58.192 61.111 0.00 0.00 0.00 4.79
324 325 4.819761 TGCGAGGCGTGGAGATGC 62.820 66.667 0.00 0.00 0.00 3.91
325 326 2.887568 GTGCGAGGCGTGGAGATG 60.888 66.667 0.00 0.00 0.00 2.90
326 327 2.449031 TTTGTGCGAGGCGTGGAGAT 62.449 55.000 0.00 0.00 0.00 2.75
327 328 2.652382 TTTTGTGCGAGGCGTGGAGA 62.652 55.000 0.00 0.00 0.00 3.71
328 329 1.781025 TTTTTGTGCGAGGCGTGGAG 61.781 55.000 0.00 0.00 0.00 3.86
329 330 1.820056 TTTTTGTGCGAGGCGTGGA 60.820 52.632 0.00 0.00 0.00 4.02
330 331 2.718731 TTTTTGTGCGAGGCGTGG 59.281 55.556 0.00 0.00 0.00 4.94
344 345 1.329599 GAGTCGTGCGAGTTGGTTTTT 59.670 47.619 3.34 0.00 0.00 1.94
345 346 0.935196 GAGTCGTGCGAGTTGGTTTT 59.065 50.000 3.34 0.00 0.00 2.43
346 347 1.213094 CGAGTCGTGCGAGTTGGTTT 61.213 55.000 3.82 0.00 0.00 3.27
347 348 1.660575 CGAGTCGTGCGAGTTGGTT 60.661 57.895 3.82 0.00 0.00 3.67
348 349 2.050351 CGAGTCGTGCGAGTTGGT 60.050 61.111 3.82 0.00 0.00 3.67
349 350 2.050351 ACGAGTCGTGCGAGTTGG 60.050 61.111 19.16 9.65 39.18 3.77
350 351 2.418333 CGACGAGTCGTGCGAGTTG 61.418 63.158 25.31 13.38 46.99 3.16
351 352 2.127345 CGACGAGTCGTGCGAGTT 60.127 61.111 25.31 0.00 46.99 3.01
397 398 2.182842 CAACCCTAGCGCTGGATGC 61.183 63.158 23.73 0.00 38.57 3.91
398 399 2.182842 GCAACCCTAGCGCTGGATG 61.183 63.158 23.73 19.69 0.00 3.51
399 400 2.190578 GCAACCCTAGCGCTGGAT 59.809 61.111 23.73 6.53 0.00 3.41
485 486 1.836802 CAGAGGGAAAGGAGGAAGAGG 59.163 57.143 0.00 0.00 0.00 3.69
558 559 2.846693 CACAAATTTCTTACGTCGGCC 58.153 47.619 0.00 0.00 0.00 6.13
595 707 4.796290 GCAGCAAGAATTCATCCATCCATG 60.796 45.833 8.44 0.00 0.00 3.66
624 771 4.293901 TCATCCATCCATCCATCCATTCAT 59.706 41.667 0.00 0.00 0.00 2.57
636 783 8.884323 ACATAGTAGTAACATTCATCCATCCAT 58.116 33.333 0.00 0.00 0.00 3.41
637 784 8.262601 ACATAGTAGTAACATTCATCCATCCA 57.737 34.615 0.00 0.00 0.00 3.41
638 785 8.993121 CAACATAGTAGTAACATTCATCCATCC 58.007 37.037 0.00 0.00 0.00 3.51
639 786 8.499162 GCAACATAGTAGTAACATTCATCCATC 58.501 37.037 0.00 0.00 0.00 3.51
640 787 7.445402 GGCAACATAGTAGTAACATTCATCCAT 59.555 37.037 0.00 0.00 0.00 3.41
641 788 6.765989 GGCAACATAGTAGTAACATTCATCCA 59.234 38.462 0.00 0.00 0.00 3.41
642 789 6.765989 TGGCAACATAGTAGTAACATTCATCC 59.234 38.462 0.00 0.00 46.17 3.51
643 790 7.786178 TGGCAACATAGTAGTAACATTCATC 57.214 36.000 0.00 0.00 46.17 2.92
768 921 3.366985 CGCCATTGACAGTAGACAGTACA 60.367 47.826 0.00 0.00 0.00 2.90
769 922 3.179830 CGCCATTGACAGTAGACAGTAC 58.820 50.000 0.00 0.00 0.00 2.73
770 923 2.823747 ACGCCATTGACAGTAGACAGTA 59.176 45.455 0.00 0.00 0.00 2.74
771 924 1.618837 ACGCCATTGACAGTAGACAGT 59.381 47.619 0.00 0.00 0.00 3.55
772 925 2.370281 ACGCCATTGACAGTAGACAG 57.630 50.000 0.00 0.00 0.00 3.51
773 926 2.224185 ACAACGCCATTGACAGTAGACA 60.224 45.455 2.48 0.00 41.23 3.41
774 927 2.157668 CACAACGCCATTGACAGTAGAC 59.842 50.000 2.48 0.00 41.23 2.59
775 928 2.224185 ACACAACGCCATTGACAGTAGA 60.224 45.455 2.48 0.00 41.23 2.59
776 929 2.143122 ACACAACGCCATTGACAGTAG 58.857 47.619 2.48 0.00 41.23 2.57
830 984 1.066573 ACTAGTACCAAGCAGCAGCAG 60.067 52.381 3.17 0.00 45.49 4.24
886 1593 2.996621 GGTCGTTGACTTTCTCCATCTG 59.003 50.000 0.00 0.00 32.47 2.90
919 1626 2.187946 CTGGCCGTCCTGATCCAC 59.812 66.667 0.00 0.00 33.56 4.02
1000 1707 2.104451 CCCTCTGCAGCATACTTCTCAT 59.896 50.000 9.47 0.00 0.00 2.90
1095 1803 5.476945 GGTTCATAATCAAAAGGGCGGATAT 59.523 40.000 0.00 0.00 0.00 1.63
1131 1839 4.722052 GATGCGTCGAAAAACTATTTGC 57.278 40.909 0.00 0.00 0.00 3.68
1187 1895 9.232882 AGGGGAGTAGTAATCAATAACCAATAA 57.767 33.333 0.00 0.00 0.00 1.40
1188 1896 8.808240 AGGGGAGTAGTAATCAATAACCAATA 57.192 34.615 0.00 0.00 0.00 1.90
1189 1897 7.707467 AGGGGAGTAGTAATCAATAACCAAT 57.293 36.000 0.00 0.00 0.00 3.16
1190 1898 7.343357 CAAGGGGAGTAGTAATCAATAACCAA 58.657 38.462 0.00 0.00 0.00 3.67
1191 1899 6.126594 CCAAGGGGAGTAGTAATCAATAACCA 60.127 42.308 0.00 0.00 35.59 3.67
1192 1900 6.126565 ACCAAGGGGAGTAGTAATCAATAACC 60.127 42.308 0.00 0.00 38.05 2.85
1193 1901 6.896883 ACCAAGGGGAGTAGTAATCAATAAC 58.103 40.000 0.00 0.00 38.05 1.89
1194 1902 6.100714 GGACCAAGGGGAGTAGTAATCAATAA 59.899 42.308 0.00 0.00 38.05 1.40
1195 1903 5.605488 GGACCAAGGGGAGTAGTAATCAATA 59.395 44.000 0.00 0.00 38.05 1.90
1209 1917 0.916809 ACTAATTCGGGACCAAGGGG 59.083 55.000 0.00 0.00 41.29 4.79
1220 1928 9.239002 CTAGAATAACCTGAGACAACTAATTCG 57.761 37.037 0.00 0.00 0.00 3.34
1249 1957 6.442952 AGATTTGTCGTCTAGATACATCTGC 58.557 40.000 10.62 3.61 36.54 4.26
1251 1959 9.562408 TCTTAGATTTGTCGTCTAGATACATCT 57.438 33.333 10.62 12.62 39.65 2.90
1273 1981 7.676893 TCCCTCTGTCCTAAATAAGTTGTCTTA 59.323 37.037 0.00 0.00 39.95 2.10
1335 2044 5.567623 GCAAGTCTGTTTCAGTAGAGGATCA 60.568 44.000 0.00 0.00 32.56 2.92
1354 2063 0.913451 AGGGGCTCAGAGATGCAAGT 60.913 55.000 0.00 0.00 0.00 3.16
1382 2091 2.049959 CAGCATCGAGAGCGTAATGAG 58.950 52.381 6.95 0.00 38.98 2.90
1398 2107 1.858458 CAGAAAAGTCGTCGAACAGCA 59.142 47.619 0.00 0.00 0.00 4.41
1447 2156 1.076841 TCTTTCCATCCCCATTGCACA 59.923 47.619 0.00 0.00 0.00 4.57
1460 2169 5.470098 GCAGTATTGACAGTTTCTCTTTCCA 59.530 40.000 0.00 0.00 0.00 3.53
1571 2280 0.248743 GCGGTCATTATCGTCGGTGA 60.249 55.000 0.00 0.00 0.00 4.02
1612 2321 4.093998 CCAATCTGGATCAACTTCTTCGTG 59.906 45.833 0.00 0.00 40.96 4.35
1886 2599 8.753497 AATCTGAGTCAATTAATTTAGGACCC 57.247 34.615 11.53 3.62 0.00 4.46
1900 2613 6.211384 TCCATGTCTAGACAAATCTGAGTCAA 59.789 38.462 28.43 1.35 45.41 3.18
1907 2620 8.489676 AGATACATCCATGTCTAGACAAATCT 57.510 34.615 28.43 20.75 45.41 2.40
1959 2672 8.354711 ACTGACTCAGATTTGTCTAGATACAA 57.645 34.615 13.25 0.00 35.12 2.41
1997 2710 9.057089 GGAGATACATAAAACAAATACTCCCTG 57.943 37.037 0.00 0.00 35.57 4.45
2093 2818 7.962373 GGGATTTCAATTTTAATTTGAAAGGCG 59.038 33.333 23.00 0.00 33.40 5.52
2162 2887 3.462383 CACGCGTACGGGTTTACC 58.538 61.111 32.21 5.99 46.04 2.85
2322 3047 3.119602 TCGCCGTAGACATAATAGATGGC 60.120 47.826 0.00 0.00 36.64 4.40
2363 3088 1.060698 GCATTCTTGTCGCCGTAGAAC 59.939 52.381 0.00 0.00 31.31 3.01
2371 3096 0.248377 GAGCATGGCATTCTTGTCGC 60.248 55.000 0.14 0.00 0.00 5.19
2396 3121 2.031682 CGCTTTGTTCCCTTCTTCACAG 60.032 50.000 0.00 0.00 0.00 3.66
2417 3142 2.909965 TTGCCGCCAACAACCTCC 60.910 61.111 0.00 0.00 0.00 4.30
2459 3184 5.652518 GGATCTAAGTATATCGGAACAGCC 58.347 45.833 0.00 0.00 0.00 4.85
2522 3247 1.271434 CCATCAGGATCATGCTCAGGG 60.271 57.143 1.57 0.00 36.89 4.45
2572 3300 0.172803 ATACTGGTCACGGTCGAAGC 59.827 55.000 0.00 0.00 37.41 3.86
2582 3310 6.014755 TGCAAATGGATTTTTCATACTGGTCA 60.015 34.615 0.00 0.00 0.00 4.02
2611 3339 1.247419 TTTAACTGCGCCATGGTGGG 61.247 55.000 26.23 10.99 38.19 4.61
2623 3351 4.265556 CGTAAGAGATCCGCACTTTAACTG 59.734 45.833 0.00 0.00 43.02 3.16
2642 3370 4.382685 CCTCAAGAGGGCAATTACTCGTAA 60.383 45.833 8.28 0.00 44.87 3.18
2661 3389 3.562141 CGTACAACACAACATTTCCCTCA 59.438 43.478 0.00 0.00 0.00 3.86
2682 3410 0.589223 ATGCACCCACAACGTTAACG 59.411 50.000 25.68 25.68 46.33 3.18
2762 3505 3.830744 TGTCCCCAGTACATAATTCCG 57.169 47.619 0.00 0.00 0.00 4.30
2838 3584 9.384764 GAGTAGCACTTATCTTTTTGAACCTAT 57.615 33.333 0.00 0.00 0.00 2.57
2853 3599 2.097825 GAACGGAGGGAGTAGCACTTA 58.902 52.381 0.00 0.00 0.00 2.24
2862 3608 5.681639 ACAAATATTTAGGAACGGAGGGAG 58.318 41.667 0.00 0.00 0.00 4.30
2863 3609 5.427481 AGACAAATATTTAGGAACGGAGGGA 59.573 40.000 0.00 0.00 0.00 4.20
2864 3610 5.681639 AGACAAATATTTAGGAACGGAGGG 58.318 41.667 0.00 0.00 0.00 4.30
2865 3611 7.553044 AGAAAGACAAATATTTAGGAACGGAGG 59.447 37.037 0.00 0.00 0.00 4.30
2866 3612 8.494016 AGAAAGACAAATATTTAGGAACGGAG 57.506 34.615 0.00 0.00 0.00 4.63
2867 3613 9.595823 CTAGAAAGACAAATATTTAGGAACGGA 57.404 33.333 0.00 0.00 0.00 4.69
2868 3614 9.595823 TCTAGAAAGACAAATATTTAGGAACGG 57.404 33.333 0.00 0.00 0.00 4.44
2897 3643 9.602568 TGCTCCGTATGTAGTCATTTATTAAAA 57.397 29.630 0.00 0.00 35.70 1.52
2898 3644 9.602568 TTGCTCCGTATGTAGTCATTTATTAAA 57.397 29.630 0.00 0.00 35.70 1.52
2899 3645 9.602568 TTTGCTCCGTATGTAGTCATTTATTAA 57.397 29.630 0.00 0.00 35.70 1.40
2900 3646 9.256477 CTTTGCTCCGTATGTAGTCATTTATTA 57.744 33.333 0.00 0.00 35.70 0.98
2901 3647 7.769044 ACTTTGCTCCGTATGTAGTCATTTATT 59.231 33.333 0.00 0.00 35.70 1.40
2902 3648 7.224753 CACTTTGCTCCGTATGTAGTCATTTAT 59.775 37.037 0.00 0.00 35.70 1.40
2903 3649 6.533723 CACTTTGCTCCGTATGTAGTCATTTA 59.466 38.462 0.00 0.00 35.70 1.40
2904 3650 5.351465 CACTTTGCTCCGTATGTAGTCATTT 59.649 40.000 0.00 0.00 35.70 2.32
2905 3651 4.870426 CACTTTGCTCCGTATGTAGTCATT 59.130 41.667 0.00 0.00 35.70 2.57
2906 3652 4.159693 TCACTTTGCTCCGTATGTAGTCAT 59.840 41.667 0.00 0.00 38.00 3.06
2907 3653 3.508402 TCACTTTGCTCCGTATGTAGTCA 59.492 43.478 0.00 0.00 0.00 3.41
2908 3654 4.106029 TCACTTTGCTCCGTATGTAGTC 57.894 45.455 0.00 0.00 0.00 2.59
2909 3655 3.510360 ACTCACTTTGCTCCGTATGTAGT 59.490 43.478 0.00 0.00 0.00 2.73
2910 3656 3.859961 CACTCACTTTGCTCCGTATGTAG 59.140 47.826 0.00 0.00 0.00 2.74
2911 3657 3.508402 TCACTCACTTTGCTCCGTATGTA 59.492 43.478 0.00 0.00 0.00 2.29
2912 3658 2.299013 TCACTCACTTTGCTCCGTATGT 59.701 45.455 0.00 0.00 0.00 2.29
2913 3659 2.959516 TCACTCACTTTGCTCCGTATG 58.040 47.619 0.00 0.00 0.00 2.39
2914 3660 3.678056 TTCACTCACTTTGCTCCGTAT 57.322 42.857 0.00 0.00 0.00 3.06
2915 3661 3.585862 GATTCACTCACTTTGCTCCGTA 58.414 45.455 0.00 0.00 0.00 4.02
2916 3662 2.417719 GATTCACTCACTTTGCTCCGT 58.582 47.619 0.00 0.00 0.00 4.69
2917 3663 1.734465 GGATTCACTCACTTTGCTCCG 59.266 52.381 0.00 0.00 0.00 4.63
2918 3664 2.485814 GTGGATTCACTCACTTTGCTCC 59.514 50.000 0.00 0.00 40.58 4.70
2919 3665 3.058639 GTGTGGATTCACTCACTTTGCTC 60.059 47.826 5.55 0.00 43.94 4.26
2920 3666 2.880890 GTGTGGATTCACTCACTTTGCT 59.119 45.455 5.55 0.00 43.94 3.91
2921 3667 2.880890 AGTGTGGATTCACTCACTTTGC 59.119 45.455 5.55 0.00 44.07 3.68
2930 3676 8.723942 AGACATATTTTAGAGTGTGGATTCAC 57.276 34.615 0.00 0.00 43.87 3.18
2951 3697 9.511272 ACTACCACATACGAATGTATATAGACA 57.489 33.333 2.07 2.07 44.70 3.41
2952 3698 9.985318 GACTACCACATACGAATGTATATAGAC 57.015 37.037 0.00 0.00 44.70 2.59
2953 3699 9.170734 GGACTACCACATACGAATGTATATAGA 57.829 37.037 0.00 0.00 44.70 1.98
2954 3700 8.953313 TGGACTACCACATACGAATGTATATAG 58.047 37.037 0.00 0.00 44.70 1.31
2955 3701 8.866970 TGGACTACCACATACGAATGTATATA 57.133 34.615 0.00 0.00 44.70 0.86
2956 3702 7.770366 TGGACTACCACATACGAATGTATAT 57.230 36.000 0.00 0.00 44.70 0.86
2972 3718 6.777213 TCTAGAGACTTCAAATGGACTACC 57.223 41.667 0.00 0.00 0.00 3.18
2973 3719 8.524487 TCTTTCTAGAGACTTCAAATGGACTAC 58.476 37.037 0.00 0.00 0.00 2.73
2974 3720 8.524487 GTCTTTCTAGAGACTTCAAATGGACTA 58.476 37.037 5.16 0.00 42.18 2.59
2975 3721 7.015682 TGTCTTTCTAGAGACTTCAAATGGACT 59.984 37.037 12.02 0.00 44.99 3.85
2976 3722 7.155328 TGTCTTTCTAGAGACTTCAAATGGAC 58.845 38.462 12.02 1.55 44.99 4.02
2977 3723 7.303182 TGTCTTTCTAGAGACTTCAAATGGA 57.697 36.000 12.02 0.00 44.99 3.41
2978 3724 7.969536 TTGTCTTTCTAGAGACTTCAAATGG 57.030 36.000 12.02 0.00 44.99 3.16
2990 3736 9.595823 CCGTTCCTAAATATTTGTCTTTCTAGA 57.404 33.333 11.05 0.00 0.00 2.43
2991 3737 9.595823 TCCGTTCCTAAATATTTGTCTTTCTAG 57.404 33.333 11.05 0.00 0.00 2.43
2992 3738 9.595823 CTCCGTTCCTAAATATTTGTCTTTCTA 57.404 33.333 11.05 0.00 0.00 2.10
2993 3739 7.553044 CCTCCGTTCCTAAATATTTGTCTTTCT 59.447 37.037 11.05 0.00 0.00 2.52
2994 3740 7.201705 CCCTCCGTTCCTAAATATTTGTCTTTC 60.202 40.741 11.05 0.00 0.00 2.62
2995 3741 6.602009 CCCTCCGTTCCTAAATATTTGTCTTT 59.398 38.462 11.05 0.00 0.00 2.52
2996 3742 6.069847 TCCCTCCGTTCCTAAATATTTGTCTT 60.070 38.462 11.05 0.00 0.00 3.01
2997 3743 5.427481 TCCCTCCGTTCCTAAATATTTGTCT 59.573 40.000 11.05 0.00 0.00 3.41
2998 3744 5.677567 TCCCTCCGTTCCTAAATATTTGTC 58.322 41.667 11.05 0.00 0.00 3.18
2999 3745 5.191124 ACTCCCTCCGTTCCTAAATATTTGT 59.809 40.000 11.05 0.00 0.00 2.83
3000 3746 5.681639 ACTCCCTCCGTTCCTAAATATTTG 58.318 41.667 11.05 1.40 0.00 2.32
3001 3747 5.970501 ACTCCCTCCGTTCCTAAATATTT 57.029 39.130 5.89 5.89 0.00 1.40
3002 3748 8.912614 ATATACTCCCTCCGTTCCTAAATATT 57.087 34.615 0.00 0.00 0.00 1.28
3003 3749 8.912614 AATATACTCCCTCCGTTCCTAAATAT 57.087 34.615 0.00 0.00 0.00 1.28
3005 3751 8.912614 ATAATATACTCCCTCCGTTCCTAAAT 57.087 34.615 0.00 0.00 0.00 1.40
3006 3752 9.471702 CTATAATATACTCCCTCCGTTCCTAAA 57.528 37.037 0.00 0.00 0.00 1.85
3007 3753 8.618385 ACTATAATATACTCCCTCCGTTCCTAA 58.382 37.037 0.00 0.00 0.00 2.69
3008 3754 8.167691 ACTATAATATACTCCCTCCGTTCCTA 57.832 38.462 0.00 0.00 0.00 2.94
3009 3755 7.042106 ACTATAATATACTCCCTCCGTTCCT 57.958 40.000 0.00 0.00 0.00 3.36
3010 3756 7.395489 TCAACTATAATATACTCCCTCCGTTCC 59.605 40.741 0.00 0.00 0.00 3.62
3011 3757 8.242739 GTCAACTATAATATACTCCCTCCGTTC 58.757 40.741 0.00 0.00 0.00 3.95
3012 3758 7.178097 GGTCAACTATAATATACTCCCTCCGTT 59.822 40.741 0.00 0.00 0.00 4.44
3013 3759 6.662663 GGTCAACTATAATATACTCCCTCCGT 59.337 42.308 0.00 0.00 0.00 4.69
3014 3760 6.662234 TGGTCAACTATAATATACTCCCTCCG 59.338 42.308 0.00 0.00 0.00 4.63
3015 3761 7.093421 GGTGGTCAACTATAATATACTCCCTCC 60.093 44.444 0.00 0.00 0.00 4.30
3016 3762 7.453752 TGGTGGTCAACTATAATATACTCCCTC 59.546 40.741 0.00 0.00 0.00 4.30
3017 3763 7.310634 TGGTGGTCAACTATAATATACTCCCT 58.689 38.462 0.00 0.00 0.00 4.20
3018 3764 7.549147 TGGTGGTCAACTATAATATACTCCC 57.451 40.000 0.00 0.00 0.00 4.30
3019 3765 8.812972 TGATGGTGGTCAACTATAATATACTCC 58.187 37.037 0.00 0.00 28.51 3.85
3020 3766 9.862371 CTGATGGTGGTCAACTATAATATACTC 57.138 37.037 0.00 0.00 28.51 2.59
3021 3767 8.314751 GCTGATGGTGGTCAACTATAATATACT 58.685 37.037 0.00 0.00 28.51 2.12
3022 3768 8.314751 AGCTGATGGTGGTCAACTATAATATAC 58.685 37.037 0.00 0.00 28.51 1.47
3023 3769 8.435931 AGCTGATGGTGGTCAACTATAATATA 57.564 34.615 0.00 0.00 28.51 0.86
3024 3770 7.321717 AGCTGATGGTGGTCAACTATAATAT 57.678 36.000 0.00 0.00 28.51 1.28
3027 3773 5.897250 TCTAGCTGATGGTGGTCAACTATAA 59.103 40.000 0.00 0.00 29.31 0.98
3050 3796 8.738199 TCGGACGTGTTTAGATCAATATATTC 57.262 34.615 0.00 0.00 0.00 1.75
3090 3840 0.542702 CTCATTTGGTGGGTGGGCTT 60.543 55.000 0.00 0.00 0.00 4.35
3241 4108 2.665165 TGAGTTTGGGCACTGAATTGT 58.335 42.857 0.00 0.00 0.00 2.71
3243 4110 3.508793 CAGATGAGTTTGGGCACTGAATT 59.491 43.478 0.00 0.00 0.00 2.17
3248 4115 0.111061 TGCAGATGAGTTTGGGCACT 59.889 50.000 0.00 0.00 0.00 4.40
3256 4123 0.700564 ACCCCATGTGCAGATGAGTT 59.299 50.000 24.45 0.00 0.00 3.01
3341 4210 2.789208 CACACCTAGCGCATCAAATTG 58.211 47.619 11.47 0.00 0.00 2.32
3354 4223 4.072131 GTCTGAAATTTGGAGCACACCTA 58.928 43.478 0.00 0.00 0.00 3.08
3454 4324 8.945481 TCAGCAAAAATATAAATTGGGTCATG 57.055 30.769 0.00 0.00 0.00 3.07
3482 4355 7.851228 TCAGTTCATTTGGACATATGAGTAGT 58.149 34.615 10.38 0.00 32.03 2.73
3503 4376 5.063880 GTGAGGTACACTCCAAATTTCAGT 58.936 41.667 8.36 0.00 46.01 3.41
3527 4400 3.039743 TGCATGGTGGATAATTTGGCAT 58.960 40.909 0.00 0.00 0.00 4.40
3529 4402 3.540314 TTGCATGGTGGATAATTTGGC 57.460 42.857 0.00 0.00 0.00 4.52
3620 4493 5.393068 TTCCAATATCCATTTCTGAGCCT 57.607 39.130 0.00 0.00 0.00 4.58


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.