Multiple sequence alignment - TraesCS4A01G371500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G371500 chr4A 100.000 3341 0 0 1 3341 645412293 645408953 0.000000e+00 6170.0
1 TraesCS4A01G371500 chr4A 84.556 259 30 6 318 566 714826170 714825912 7.160000e-62 248.0
2 TraesCS4A01G371500 chr3A 98.152 2706 38 1 636 3341 506481626 506478933 0.000000e+00 4710.0
3 TraesCS4A01G371500 chr7B 96.637 2706 43 3 636 3341 504202022 504199365 0.000000e+00 4449.0
4 TraesCS4A01G371500 chr7B 94.407 751 22 12 2610 3341 439310366 439311115 0.000000e+00 1136.0
5 TraesCS4A01G371500 chr7B 94.503 382 18 3 2961 3341 554164103 554164482 1.340000e-163 586.0
6 TraesCS4A01G371500 chrUn 98.882 984 11 0 1591 2574 409399671 409398688 0.000000e+00 1757.0
7 TraesCS4A01G371500 chrUn 98.780 984 12 0 1591 2574 406745206 406746189 0.000000e+00 1751.0
8 TraesCS4A01G371500 chrUn 96.429 56 2 0 2568 2623 352841528 352841583 3.550000e-15 93.5
9 TraesCS4A01G371500 chrUn 96.429 56 2 0 2568 2623 406746155 406746210 3.550000e-15 93.5
10 TraesCS4A01G371500 chrUn 96.429 56 2 0 2568 2623 409398722 409398667 3.550000e-15 93.5
11 TraesCS4A01G371500 chr4B 98.981 981 10 0 1591 2571 139743890 139744870 0.000000e+00 1757.0
12 TraesCS4A01G371500 chr4B 98.543 961 14 0 636 1596 139742624 139743584 0.000000e+00 1698.0
13 TraesCS4A01G371500 chr4B 96.252 747 11 8 2610 3341 139745334 139746078 0.000000e+00 1208.0
14 TraesCS4A01G371500 chr4B 84.436 257 31 5 317 564 17484506 17484762 9.260000e-61 244.0
15 TraesCS4A01G371500 chr3B 98.882 984 11 0 1591 2574 546821322 546820339 0.000000e+00 1757.0
16 TraesCS4A01G371500 chr3B 98.647 961 13 0 636 1596 546831381 546830421 0.000000e+00 1703.0
17 TraesCS4A01G371500 chr3B 96.252 747 10 9 2610 3341 731129714 731130457 0.000000e+00 1208.0
18 TraesCS4A01G371500 chr1B 98.882 984 11 0 1591 2574 167928860 167927877 0.000000e+00 1757.0
19 TraesCS4A01G371500 chr1B 97.814 732 4 1 2610 3341 167927513 167926794 0.000000e+00 1253.0
20 TraesCS4A01G371500 chr1B 90.511 411 21 10 2944 3341 573881153 573881558 8.210000e-146 527.0
21 TraesCS4A01G371500 chr5A 98.780 984 12 0 1591 2574 346307563 346308546 0.000000e+00 1751.0
22 TraesCS4A01G371500 chr5A 98.231 961 17 0 636 1596 346306297 346307257 0.000000e+00 1681.0
23 TraesCS4A01G371500 chr5A 95.652 759 5 4 2610 3341 346309007 346309764 0.000000e+00 1194.0
24 TraesCS4A01G371500 chr5A 84.144 864 105 23 633 1489 681944090 681944928 0.000000e+00 808.0
25 TraesCS4A01G371500 chr5A 84.884 258 28 7 317 564 281137730 281137474 1.990000e-62 250.0
26 TraesCS4A01G371500 chr5B 98.679 984 13 0 1591 2574 383535818 383534835 0.000000e+00 1746.0
27 TraesCS4A01G371500 chr5B 98.231 961 17 0 636 1596 514841171 514842131 0.000000e+00 1681.0
28 TraesCS4A01G371500 chr5B 96.448 732 7 8 2610 3341 56908906 56909618 0.000000e+00 1190.0
29 TraesCS4A01G371500 chr5B 96.937 555 14 2 2790 3341 383534416 383533862 0.000000e+00 928.0
30 TraesCS4A01G371500 chr5B 91.852 405 21 7 2944 3341 265291120 265291519 3.770000e-154 555.0
31 TraesCS4A01G371500 chr5B 96.552 58 2 0 2566 2623 383534871 383534814 2.740000e-16 97.1
32 TraesCS4A01G371500 chr1A 98.335 961 16 0 636 1596 63763700 63762740 0.000000e+00 1687.0
33 TraesCS4A01G371500 chr1A 97.404 732 6 2 2610 3341 320477151 320476433 0.000000e+00 1234.0
34 TraesCS4A01G371500 chr1A 96.429 56 2 0 2568 2623 63760838 63760783 3.550000e-15 93.5
35 TraesCS4A01G371500 chr1A 96.429 56 2 0 2568 2623 63761485 63761430 3.550000e-15 93.5
36 TraesCS4A01G371500 chr1A 96.429 56 2 0 2568 2623 320477549 320477494 3.550000e-15 93.5
37 TraesCS4A01G371500 chr2B 98.335 961 15 1 636 1596 652849818 652848859 0.000000e+00 1685.0
38 TraesCS4A01G371500 chr2B 97.678 732 4 2 2610 3341 652847236 652846518 0.000000e+00 1245.0
39 TraesCS4A01G371500 chr2B 84.825 257 29 7 317 564 229949039 229948784 1.990000e-62 250.0
40 TraesCS4A01G371500 chr2A 97.831 968 21 0 629 1596 672536845 672537812 0.000000e+00 1672.0
41 TraesCS4A01G371500 chr2A 92.593 405 18 6 2944 3341 672539636 672540035 3.740000e-159 571.0
42 TraesCS4A01G371500 chr2A 84.733 262 31 6 310 565 188909318 188909576 1.540000e-63 254.0
43 TraesCS4A01G371500 chr7D 84.340 447 48 14 205 636 39511970 39511531 5.160000e-113 418.0
44 TraesCS4A01G371500 chr7A 84.470 264 31 6 317 571 632652416 632652154 5.530000e-63 252.0
45 TraesCS4A01G371500 chr7A 83.456 272 34 6 309 571 632669204 632668935 3.330000e-60 243.0
46 TraesCS4A01G371500 chr3D 85.259 251 27 6 324 564 575094315 575094065 1.990000e-62 250.0
47 TraesCS4A01G371500 chr6A 84.615 260 26 8 317 565 32227923 32228179 2.570000e-61 246.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G371500 chr4A 645408953 645412293 3340 True 6170.000000 6170 100.000000 1 3341 1 chr4A.!!$R1 3340
1 TraesCS4A01G371500 chr3A 506478933 506481626 2693 True 4710.000000 4710 98.152000 636 3341 1 chr3A.!!$R1 2705
2 TraesCS4A01G371500 chr7B 504199365 504202022 2657 True 4449.000000 4449 96.637000 636 3341 1 chr7B.!!$R1 2705
3 TraesCS4A01G371500 chr7B 439310366 439311115 749 False 1136.000000 1136 94.407000 2610 3341 1 chr7B.!!$F1 731
4 TraesCS4A01G371500 chrUn 409398667 409399671 1004 True 925.250000 1757 97.655500 1591 2623 2 chrUn.!!$R1 1032
5 TraesCS4A01G371500 chrUn 406745206 406746210 1004 False 922.250000 1751 97.604500 1591 2623 2 chrUn.!!$F2 1032
6 TraesCS4A01G371500 chr4B 139742624 139746078 3454 False 1554.333333 1757 97.925333 636 3341 3 chr4B.!!$F2 2705
7 TraesCS4A01G371500 chr3B 546820339 546821322 983 True 1757.000000 1757 98.882000 1591 2574 1 chr3B.!!$R1 983
8 TraesCS4A01G371500 chr3B 546830421 546831381 960 True 1703.000000 1703 98.647000 636 1596 1 chr3B.!!$R2 960
9 TraesCS4A01G371500 chr3B 731129714 731130457 743 False 1208.000000 1208 96.252000 2610 3341 1 chr3B.!!$F1 731
10 TraesCS4A01G371500 chr1B 167926794 167928860 2066 True 1505.000000 1757 98.348000 1591 3341 2 chr1B.!!$R1 1750
11 TraesCS4A01G371500 chr5A 346306297 346309764 3467 False 1542.000000 1751 97.554333 636 3341 3 chr5A.!!$F2 2705
12 TraesCS4A01G371500 chr5A 681944090 681944928 838 False 808.000000 808 84.144000 633 1489 1 chr5A.!!$F1 856
13 TraesCS4A01G371500 chr5B 514841171 514842131 960 False 1681.000000 1681 98.231000 636 1596 1 chr5B.!!$F3 960
14 TraesCS4A01G371500 chr5B 56908906 56909618 712 False 1190.000000 1190 96.448000 2610 3341 1 chr5B.!!$F1 731
15 TraesCS4A01G371500 chr5B 383533862 383535818 1956 True 923.700000 1746 97.389333 1591 3341 3 chr5B.!!$R1 1750
16 TraesCS4A01G371500 chr1A 320476433 320477549 1116 True 663.750000 1234 96.916500 2568 3341 2 chr1A.!!$R2 773
17 TraesCS4A01G371500 chr1A 63760783 63763700 2917 True 624.666667 1687 97.064333 636 2623 3 chr1A.!!$R1 1987
18 TraesCS4A01G371500 chr2B 652846518 652849818 3300 True 1465.000000 1685 98.006500 636 3341 2 chr2B.!!$R2 2705
19 TraesCS4A01G371500 chr2A 672536845 672540035 3190 False 1121.500000 1672 95.212000 629 3341 2 chr2A.!!$F2 2712

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
322 323 0.034477 AACCGTTCCCATCACCCATC 60.034 55.0 0.00 0.00 0.00 3.51 F
407 408 0.037232 CAGTGGGAGGAGACGTTTCC 60.037 60.0 17.16 17.16 37.52 3.13 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1250 1254 2.701951 GACCATTGTAATCCGGGTCCTA 59.298 50.000 0.0 0.0 41.67 2.94 R
2374 2689 1.428912 ACAGCCATCCTTCCCAAAAGA 59.571 47.619 0.0 0.0 0.00 2.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 9.852091 AAGTCAGCATCTTCTGAAATTTATTTC 57.148 29.630 8.00 8.00 43.89 2.17
45 46 9.771534 TTTATTTCAATTTTCCAACGATTTCCT 57.228 25.926 0.00 0.00 0.00 3.36
46 47 9.771534 TTATTTCAATTTTCCAACGATTTCCTT 57.228 25.926 0.00 0.00 0.00 3.36
47 48 8.675705 ATTTCAATTTTCCAACGATTTCCTTT 57.324 26.923 0.00 0.00 0.00 3.11
48 49 7.707774 TTCAATTTTCCAACGATTTCCTTTC 57.292 32.000 0.00 0.00 0.00 2.62
49 50 6.810911 TCAATTTTCCAACGATTTCCTTTCA 58.189 32.000 0.00 0.00 0.00 2.69
50 51 7.441017 TCAATTTTCCAACGATTTCCTTTCAT 58.559 30.769 0.00 0.00 0.00 2.57
51 52 8.580720 TCAATTTTCCAACGATTTCCTTTCATA 58.419 29.630 0.00 0.00 0.00 2.15
52 53 8.863049 CAATTTTCCAACGATTTCCTTTCATAG 58.137 33.333 0.00 0.00 0.00 2.23
53 54 7.753309 TTTTCCAACGATTTCCTTTCATAGA 57.247 32.000 0.00 0.00 0.00 1.98
54 55 7.753309 TTTCCAACGATTTCCTTTCATAGAA 57.247 32.000 0.00 0.00 0.00 2.10
55 56 6.985188 TCCAACGATTTCCTTTCATAGAAG 57.015 37.500 0.00 0.00 0.00 2.85
56 57 6.707290 TCCAACGATTTCCTTTCATAGAAGA 58.293 36.000 0.00 0.00 0.00 2.87
57 58 7.165485 TCCAACGATTTCCTTTCATAGAAGAA 58.835 34.615 0.00 0.00 0.00 2.52
58 59 7.334421 TCCAACGATTTCCTTTCATAGAAGAAG 59.666 37.037 0.00 0.00 0.00 2.85
59 60 7.334421 CCAACGATTTCCTTTCATAGAAGAAGA 59.666 37.037 0.00 0.00 0.00 2.87
60 61 8.887717 CAACGATTTCCTTTCATAGAAGAAGAT 58.112 33.333 0.00 0.00 0.00 2.40
61 62 8.430801 ACGATTTCCTTTCATAGAAGAAGATG 57.569 34.615 0.00 0.00 0.00 2.90
62 63 8.043710 ACGATTTCCTTTCATAGAAGAAGATGT 58.956 33.333 0.00 0.00 0.00 3.06
63 64 8.547069 CGATTTCCTTTCATAGAAGAAGATGTC 58.453 37.037 0.00 0.00 0.00 3.06
64 65 8.744568 ATTTCCTTTCATAGAAGAAGATGTCC 57.255 34.615 0.00 0.00 0.00 4.02
65 66 6.240549 TCCTTTCATAGAAGAAGATGTCCC 57.759 41.667 0.00 0.00 0.00 4.46
66 67 5.131142 TCCTTTCATAGAAGAAGATGTCCCC 59.869 44.000 0.00 0.00 0.00 4.81
67 68 4.672587 TTCATAGAAGAAGATGTCCCCG 57.327 45.455 0.00 0.00 0.00 5.73
68 69 3.643237 TCATAGAAGAAGATGTCCCCGT 58.357 45.455 0.00 0.00 0.00 5.28
69 70 3.637229 TCATAGAAGAAGATGTCCCCGTC 59.363 47.826 0.00 0.00 0.00 4.79
70 71 1.938585 AGAAGAAGATGTCCCCGTCA 58.061 50.000 0.00 0.00 0.00 4.35
71 72 2.257207 AGAAGAAGATGTCCCCGTCAA 58.743 47.619 0.00 0.00 0.00 3.18
72 73 2.028020 AGAAGAAGATGTCCCCGTCAAC 60.028 50.000 0.00 0.00 0.00 3.18
73 74 1.645710 AGAAGATGTCCCCGTCAACT 58.354 50.000 0.00 0.00 0.00 3.16
74 75 2.816411 AGAAGATGTCCCCGTCAACTA 58.184 47.619 0.00 0.00 0.00 2.24
75 76 3.375699 AGAAGATGTCCCCGTCAACTAT 58.624 45.455 0.00 0.00 0.00 2.12
76 77 3.133003 AGAAGATGTCCCCGTCAACTATG 59.867 47.826 0.00 0.00 0.00 2.23
77 78 2.747177 AGATGTCCCCGTCAACTATGA 58.253 47.619 0.00 0.00 0.00 2.15
78 79 3.104512 AGATGTCCCCGTCAACTATGAA 58.895 45.455 0.00 0.00 37.30 2.57
79 80 3.133003 AGATGTCCCCGTCAACTATGAAG 59.867 47.826 0.00 0.00 37.30 3.02
80 81 1.066430 TGTCCCCGTCAACTATGAAGC 60.066 52.381 0.00 0.00 37.30 3.86
81 82 0.174845 TCCCCGTCAACTATGAAGCG 59.825 55.000 0.00 0.00 37.30 4.68
82 83 0.108329 CCCCGTCAACTATGAAGCGT 60.108 55.000 0.00 0.00 37.30 5.07
83 84 0.999406 CCCGTCAACTATGAAGCGTG 59.001 55.000 0.00 0.00 37.30 5.34
84 85 1.671850 CCCGTCAACTATGAAGCGTGT 60.672 52.381 0.00 0.00 37.30 4.49
85 86 1.390123 CCGTCAACTATGAAGCGTGTG 59.610 52.381 0.00 0.00 37.30 3.82
86 87 2.058798 CGTCAACTATGAAGCGTGTGT 58.941 47.619 0.00 0.00 37.30 3.72
87 88 2.159973 CGTCAACTATGAAGCGTGTGTG 60.160 50.000 0.00 0.00 37.30 3.82
88 89 3.057019 GTCAACTATGAAGCGTGTGTGA 58.943 45.455 0.00 0.00 37.30 3.58
89 90 3.057019 TCAACTATGAAGCGTGTGTGAC 58.943 45.455 0.00 0.00 30.99 3.67
90 91 4.396953 TCAACTATGAAGCGTGTGTGACG 61.397 47.826 0.00 0.00 41.11 4.35
91 92 6.563958 TCAACTATGAAGCGTGTGTGACGA 62.564 45.833 0.00 0.00 40.84 4.20
99 100 3.173247 GTGTGTGACGACGTCATCA 57.827 52.632 31.30 27.20 44.63 3.07
100 101 1.483316 GTGTGTGACGACGTCATCAA 58.517 50.000 31.30 18.19 44.63 2.57
101 102 2.058798 GTGTGTGACGACGTCATCAAT 58.941 47.619 31.30 0.00 44.63 2.57
102 103 2.090658 GTGTGTGACGACGTCATCAATC 59.909 50.000 31.30 19.10 44.63 2.67
103 104 2.030274 TGTGTGACGACGTCATCAATCT 60.030 45.455 31.30 0.00 44.63 2.40
104 105 2.594654 GTGTGACGACGTCATCAATCTC 59.405 50.000 31.30 17.76 44.63 2.75
105 106 2.227865 TGTGACGACGTCATCAATCTCA 59.772 45.455 31.30 19.98 44.63 3.27
106 107 3.242518 GTGACGACGTCATCAATCTCAA 58.757 45.455 31.30 3.60 44.63 3.02
107 108 3.301906 GTGACGACGTCATCAATCTCAAG 59.698 47.826 31.30 0.00 44.63 3.02
108 109 3.190535 TGACGACGTCATCAATCTCAAGA 59.809 43.478 26.04 0.00 37.67 3.02
109 110 4.142381 TGACGACGTCATCAATCTCAAGAT 60.142 41.667 26.04 0.00 37.67 2.40
110 111 4.108336 ACGACGTCATCAATCTCAAGATG 58.892 43.478 17.16 0.00 42.25 2.90
111 112 4.142381 ACGACGTCATCAATCTCAAGATGA 60.142 41.667 17.16 0.00 46.01 2.92
117 118 5.681639 TCATCAATCTCAAGATGACATGCT 58.318 37.500 0.00 0.00 44.04 3.79
118 119 6.823497 TCATCAATCTCAAGATGACATGCTA 58.177 36.000 0.00 0.00 44.04 3.49
119 120 6.929606 TCATCAATCTCAAGATGACATGCTAG 59.070 38.462 0.00 0.00 44.04 3.42
120 121 5.055144 TCAATCTCAAGATGACATGCTAGC 58.945 41.667 8.10 8.10 34.49 3.42
121 122 4.959560 ATCTCAAGATGACATGCTAGCT 57.040 40.909 17.23 0.00 32.68 3.32
122 123 4.750021 TCTCAAGATGACATGCTAGCTT 57.250 40.909 17.23 6.81 0.00 3.74
123 124 5.859205 TCTCAAGATGACATGCTAGCTTA 57.141 39.130 17.23 0.00 0.00 3.09
124 125 6.225981 TCTCAAGATGACATGCTAGCTTAA 57.774 37.500 17.23 0.00 0.00 1.85
125 126 6.824553 TCTCAAGATGACATGCTAGCTTAAT 58.175 36.000 17.23 4.47 0.00 1.40
126 127 7.955918 TCTCAAGATGACATGCTAGCTTAATA 58.044 34.615 17.23 0.00 0.00 0.98
127 128 8.591940 TCTCAAGATGACATGCTAGCTTAATAT 58.408 33.333 17.23 5.22 0.00 1.28
128 129 9.217278 CTCAAGATGACATGCTAGCTTAATATT 57.783 33.333 17.23 5.43 0.00 1.28
129 130 9.565090 TCAAGATGACATGCTAGCTTAATATTT 57.435 29.630 17.23 0.00 0.00 1.40
130 131 9.823098 CAAGATGACATGCTAGCTTAATATTTC 57.177 33.333 17.23 3.87 0.00 2.17
131 132 8.558973 AGATGACATGCTAGCTTAATATTTCC 57.441 34.615 17.23 0.00 0.00 3.13
132 133 8.159447 AGATGACATGCTAGCTTAATATTTCCA 58.841 33.333 17.23 1.09 0.00 3.53
133 134 8.696043 ATGACATGCTAGCTTAATATTTCCAA 57.304 30.769 17.23 0.00 0.00 3.53
134 135 8.158169 TGACATGCTAGCTTAATATTTCCAAG 57.842 34.615 17.23 0.00 0.00 3.61
135 136 6.974965 ACATGCTAGCTTAATATTTCCAAGC 58.025 36.000 17.23 11.82 43.97 4.01
151 152 7.915293 TTTCCAAGCTTTTCATAACGATAGA 57.085 32.000 0.00 0.00 41.38 1.98
152 153 7.539712 TTCCAAGCTTTTCATAACGATAGAG 57.460 36.000 0.00 0.00 41.38 2.43
153 154 6.640518 TCCAAGCTTTTCATAACGATAGAGT 58.359 36.000 0.00 0.00 41.38 3.24
154 155 7.778083 TCCAAGCTTTTCATAACGATAGAGTA 58.222 34.615 0.00 0.00 41.38 2.59
155 156 7.705325 TCCAAGCTTTTCATAACGATAGAGTAC 59.295 37.037 0.00 0.00 41.38 2.73
156 157 7.491372 CCAAGCTTTTCATAACGATAGAGTACA 59.509 37.037 0.00 0.00 41.38 2.90
157 158 7.988904 AGCTTTTCATAACGATAGAGTACAC 57.011 36.000 0.00 0.00 41.38 2.90
158 159 7.544622 AGCTTTTCATAACGATAGAGTACACA 58.455 34.615 0.00 0.00 41.38 3.72
159 160 8.198109 AGCTTTTCATAACGATAGAGTACACAT 58.802 33.333 0.00 0.00 41.38 3.21
160 161 9.459640 GCTTTTCATAACGATAGAGTACACATA 57.540 33.333 0.00 0.00 41.38 2.29
164 165 9.893305 TTCATAACGATAGAGTACACATATGTG 57.107 33.333 29.97 29.97 45.70 3.21
165 166 8.021396 TCATAACGATAGAGTACACATATGTGC 58.979 37.037 31.19 18.25 44.75 4.57
166 167 5.767816 ACGATAGAGTACACATATGTGCA 57.232 39.130 31.19 19.34 44.75 4.57
167 168 6.332735 ACGATAGAGTACACATATGTGCAT 57.667 37.500 31.19 19.16 44.75 3.96
168 169 6.749139 ACGATAGAGTACACATATGTGCATT 58.251 36.000 31.19 18.47 44.75 3.56
169 170 6.863645 ACGATAGAGTACACATATGTGCATTC 59.136 38.462 31.19 24.70 44.75 2.67
170 171 6.032880 CGATAGAGTACACATATGTGCATTCG 59.967 42.308 31.19 23.62 43.39 3.34
171 172 8.255026 CGATAGAGTACACATATGTGCATTCGT 61.255 40.741 31.19 19.36 43.39 3.85
176 177 4.979564 CACATATGTGCATTCGTAGGAG 57.020 45.455 22.27 0.00 39.39 3.69
177 178 3.185188 CACATATGTGCATTCGTAGGAGC 59.815 47.826 22.27 0.00 39.39 4.70
178 179 3.181466 ACATATGTGCATTCGTAGGAGCA 60.181 43.478 7.78 0.00 34.10 4.26
179 180 2.401583 ATGTGCATTCGTAGGAGCAA 57.598 45.000 1.42 0.00 38.91 3.91
180 181 1.725641 TGTGCATTCGTAGGAGCAAG 58.274 50.000 1.42 0.00 38.91 4.01
181 182 1.001974 TGTGCATTCGTAGGAGCAAGT 59.998 47.619 1.42 0.00 38.91 3.16
182 183 1.394917 GTGCATTCGTAGGAGCAAGTG 59.605 52.381 1.42 0.00 38.91 3.16
183 184 1.001974 TGCATTCGTAGGAGCAAGTGT 59.998 47.619 0.00 0.00 33.48 3.55
184 185 2.232696 TGCATTCGTAGGAGCAAGTGTA 59.767 45.455 0.00 0.00 33.48 2.90
185 186 2.603560 GCATTCGTAGGAGCAAGTGTAC 59.396 50.000 0.00 0.00 0.00 2.90
186 187 2.624316 TTCGTAGGAGCAAGTGTACG 57.376 50.000 0.00 0.00 39.66 3.67
187 188 1.527034 TCGTAGGAGCAAGTGTACGT 58.473 50.000 0.00 0.00 39.39 3.57
188 189 1.198408 TCGTAGGAGCAAGTGTACGTG 59.802 52.381 0.00 0.00 39.39 4.49
193 194 2.127758 GCAAGTGTACGTGCGCAC 60.128 61.111 30.42 30.42 41.06 5.34
208 209 4.811208 GTGCGCACGTATATAAGCATATG 58.189 43.478 26.77 0.00 36.96 1.78
209 210 4.326278 GTGCGCACGTATATAAGCATATGT 59.674 41.667 26.77 0.00 36.96 2.29
210 211 5.513849 GTGCGCACGTATATAAGCATATGTA 59.486 40.000 26.77 0.00 36.96 2.29
211 212 5.513849 TGCGCACGTATATAAGCATATGTAC 59.486 40.000 5.66 5.95 34.50 2.90
212 213 5.742453 GCGCACGTATATAAGCATATGTACT 59.258 40.000 0.30 0.00 35.24 2.73
213 214 6.291112 GCGCACGTATATAAGCATATGTACTG 60.291 42.308 0.30 10.45 35.24 2.74
214 215 6.745907 CGCACGTATATAAGCATATGTACTGT 59.254 38.462 12.20 9.47 35.24 3.55
215 216 7.272731 CGCACGTATATAAGCATATGTACTGTT 59.727 37.037 12.20 0.00 35.24 3.16
216 217 9.563898 GCACGTATATAAGCATATGTACTGTTA 57.436 33.333 12.20 0.00 35.24 2.41
251 252 9.145442 ACTCCCTCTATAAACTAACATAAGACC 57.855 37.037 0.00 0.00 0.00 3.85
252 253 8.174733 TCCCTCTATAAACTAACATAAGACCG 57.825 38.462 0.00 0.00 0.00 4.79
253 254 7.781693 TCCCTCTATAAACTAACATAAGACCGT 59.218 37.037 0.00 0.00 0.00 4.83
254 255 8.419442 CCCTCTATAAACTAACATAAGACCGTT 58.581 37.037 0.00 0.00 0.00 4.44
255 256 9.813446 CCTCTATAAACTAACATAAGACCGTTT 57.187 33.333 0.00 0.00 0.00 3.60
272 273 9.832445 AAGACCGTTTATATTAGATGTGAACAT 57.168 29.630 0.00 0.00 39.70 2.71
273 274 9.832445 AGACCGTTTATATTAGATGTGAACATT 57.168 29.630 0.00 0.00 36.57 2.71
287 288 9.574516 AGATGTGAACATTAGTTTAAAAGGAGT 57.425 29.630 0.00 0.00 38.30 3.85
290 291 9.841295 TGTGAACATTAGTTTAAAAGGAGTACT 57.159 29.630 0.00 0.00 38.30 2.73
292 293 9.498176 TGAACATTAGTTTAAAAGGAGTACTCC 57.502 33.333 31.29 31.29 43.40 3.85
293 294 8.859236 AACATTAGTTTAAAAGGAGTACTCCC 57.141 34.615 33.81 18.85 42.26 4.30
294 295 8.442374 AACATTAGTTTAAAAGGAGTACTCCCA 58.558 33.333 33.81 16.80 42.26 4.37
306 307 6.159299 GGAGTACTCCCAAGTATTCTAACC 57.841 45.833 28.87 0.44 41.84 2.85
307 308 5.221204 GGAGTACTCCCAAGTATTCTAACCG 60.221 48.000 28.87 0.00 41.84 4.44
308 309 5.267587 AGTACTCCCAAGTATTCTAACCGT 58.732 41.667 0.00 0.00 40.08 4.83
309 310 5.718607 AGTACTCCCAAGTATTCTAACCGTT 59.281 40.000 0.00 0.00 40.08 4.44
310 311 5.082251 ACTCCCAAGTATTCTAACCGTTC 57.918 43.478 0.00 0.00 32.59 3.95
311 312 4.081254 ACTCCCAAGTATTCTAACCGTTCC 60.081 45.833 0.00 0.00 32.59 3.62
312 313 3.198417 TCCCAAGTATTCTAACCGTTCCC 59.802 47.826 0.00 0.00 0.00 3.97
313 314 3.054948 CCCAAGTATTCTAACCGTTCCCA 60.055 47.826 0.00 0.00 0.00 4.37
314 315 4.384868 CCCAAGTATTCTAACCGTTCCCAT 60.385 45.833 0.00 0.00 0.00 4.00
315 316 4.814771 CCAAGTATTCTAACCGTTCCCATC 59.185 45.833 0.00 0.00 0.00 3.51
316 317 5.424757 CAAGTATTCTAACCGTTCCCATCA 58.575 41.667 0.00 0.00 0.00 3.07
317 318 5.019785 AGTATTCTAACCGTTCCCATCAC 57.980 43.478 0.00 0.00 0.00 3.06
318 319 2.773993 TTCTAACCGTTCCCATCACC 57.226 50.000 0.00 0.00 0.00 4.02
319 320 0.906775 TCTAACCGTTCCCATCACCC 59.093 55.000 0.00 0.00 0.00 4.61
320 321 0.616371 CTAACCGTTCCCATCACCCA 59.384 55.000 0.00 0.00 0.00 4.51
321 322 1.211949 CTAACCGTTCCCATCACCCAT 59.788 52.381 0.00 0.00 0.00 4.00
322 323 0.034477 AACCGTTCCCATCACCCATC 60.034 55.000 0.00 0.00 0.00 3.51
323 324 1.204786 ACCGTTCCCATCACCCATCA 61.205 55.000 0.00 0.00 0.00 3.07
324 325 0.464373 CCGTTCCCATCACCCATCAG 60.464 60.000 0.00 0.00 0.00 2.90
325 326 0.464373 CGTTCCCATCACCCATCAGG 60.464 60.000 0.00 0.00 43.78 3.86
341 342 3.284336 GGGTTCAAATCCCGGTGC 58.716 61.111 0.00 0.00 35.27 5.01
342 343 1.304134 GGGTTCAAATCCCGGTGCT 60.304 57.895 0.00 0.00 35.27 4.40
343 344 1.313091 GGGTTCAAATCCCGGTGCTC 61.313 60.000 0.00 0.00 35.27 4.26
344 345 1.644786 GGTTCAAATCCCGGTGCTCG 61.645 60.000 0.00 0.00 38.88 5.03
345 346 2.038269 TTCAAATCCCGGTGCTCGC 61.038 57.895 0.00 0.00 37.59 5.03
346 347 2.739849 TTCAAATCCCGGTGCTCGCA 62.740 55.000 0.00 0.00 37.59 5.10
347 348 2.114670 CAAATCCCGGTGCTCGCAT 61.115 57.895 0.00 0.00 37.59 4.73
348 349 1.378514 AAATCCCGGTGCTCGCATT 60.379 52.632 0.00 0.00 37.59 3.56
349 350 0.965363 AAATCCCGGTGCTCGCATTT 60.965 50.000 0.00 0.00 37.59 2.32
350 351 0.107410 AATCCCGGTGCTCGCATTTA 60.107 50.000 0.00 0.00 37.59 1.40
351 352 0.108585 ATCCCGGTGCTCGCATTTAT 59.891 50.000 0.00 0.00 37.59 1.40
352 353 0.531974 TCCCGGTGCTCGCATTTATC 60.532 55.000 0.00 0.00 37.59 1.75
353 354 0.532862 CCCGGTGCTCGCATTTATCT 60.533 55.000 0.00 0.00 37.59 1.98
354 355 1.299541 CCGGTGCTCGCATTTATCTT 58.700 50.000 0.00 0.00 37.59 2.40
355 356 1.003545 CCGGTGCTCGCATTTATCTTG 60.004 52.381 0.00 0.00 37.59 3.02
356 357 1.003545 CGGTGCTCGCATTTATCTTGG 60.004 52.381 0.00 0.00 0.00 3.61
357 358 2.288666 GGTGCTCGCATTTATCTTGGA 58.711 47.619 0.00 0.00 0.00 3.53
358 359 2.880890 GGTGCTCGCATTTATCTTGGAT 59.119 45.455 0.00 0.00 0.00 3.41
359 360 3.316308 GGTGCTCGCATTTATCTTGGATT 59.684 43.478 0.00 0.00 0.00 3.01
360 361 4.202050 GGTGCTCGCATTTATCTTGGATTT 60.202 41.667 0.00 0.00 0.00 2.17
361 362 5.008613 GGTGCTCGCATTTATCTTGGATTTA 59.991 40.000 0.00 0.00 0.00 1.40
362 363 6.294176 GGTGCTCGCATTTATCTTGGATTTAT 60.294 38.462 0.00 0.00 0.00 1.40
363 364 7.141363 GTGCTCGCATTTATCTTGGATTTATT 58.859 34.615 0.00 0.00 0.00 1.40
364 365 7.649306 GTGCTCGCATTTATCTTGGATTTATTT 59.351 33.333 0.00 0.00 0.00 1.40
365 366 7.862372 TGCTCGCATTTATCTTGGATTTATTTC 59.138 33.333 0.00 0.00 0.00 2.17
366 367 7.862372 GCTCGCATTTATCTTGGATTTATTTCA 59.138 33.333 0.00 0.00 0.00 2.69
367 368 9.390795 CTCGCATTTATCTTGGATTTATTTCAG 57.609 33.333 0.00 0.00 0.00 3.02
368 369 8.352201 TCGCATTTATCTTGGATTTATTTCAGG 58.648 33.333 0.00 0.00 0.00 3.86
369 370 8.352201 CGCATTTATCTTGGATTTATTTCAGGA 58.648 33.333 0.00 0.00 0.00 3.86
370 371 9.688592 GCATTTATCTTGGATTTATTTCAGGAG 57.311 33.333 0.00 0.00 0.00 3.69
374 375 7.888250 ATCTTGGATTTATTTCAGGAGTTCC 57.112 36.000 0.00 0.00 0.00 3.62
375 376 5.880332 TCTTGGATTTATTTCAGGAGTTCCG 59.120 40.000 0.00 0.00 42.08 4.30
376 377 5.429681 TGGATTTATTTCAGGAGTTCCGA 57.570 39.130 0.00 0.00 42.08 4.55
377 378 5.183228 TGGATTTATTTCAGGAGTTCCGAC 58.817 41.667 0.00 0.00 42.08 4.79
378 379 4.270325 GGATTTATTTCAGGAGTTCCGACG 59.730 45.833 0.00 0.00 42.08 5.12
379 380 4.524316 TTTATTTCAGGAGTTCCGACGA 57.476 40.909 0.00 0.00 42.08 4.20
380 381 4.730949 TTATTTCAGGAGTTCCGACGAT 57.269 40.909 0.00 0.00 42.08 3.73
381 382 5.840243 TTATTTCAGGAGTTCCGACGATA 57.160 39.130 0.00 0.00 42.08 2.92
382 383 3.498927 TTTCAGGAGTTCCGACGATAC 57.501 47.619 0.00 0.00 42.08 2.24
383 384 2.118313 TCAGGAGTTCCGACGATACA 57.882 50.000 0.00 0.00 42.08 2.29
384 385 1.741706 TCAGGAGTTCCGACGATACAC 59.258 52.381 0.00 0.00 42.08 2.90
385 386 1.743958 CAGGAGTTCCGACGATACACT 59.256 52.381 0.00 0.00 42.08 3.55
386 387 2.163815 CAGGAGTTCCGACGATACACTT 59.836 50.000 0.00 0.00 42.08 3.16
387 388 2.824341 AGGAGTTCCGACGATACACTTT 59.176 45.455 0.00 0.00 42.08 2.66
388 389 3.119566 AGGAGTTCCGACGATACACTTTC 60.120 47.826 0.00 0.00 42.08 2.62
389 390 3.366679 GGAGTTCCGACGATACACTTTCA 60.367 47.826 0.00 0.00 0.00 2.69
390 391 3.834610 AGTTCCGACGATACACTTTCAG 58.165 45.455 0.00 0.00 0.00 3.02
391 392 3.255149 AGTTCCGACGATACACTTTCAGT 59.745 43.478 0.00 0.00 0.00 3.41
401 402 2.464157 CACTTTCAGTGGGAGGAGAC 57.536 55.000 0.00 0.00 42.35 3.36
402 403 0.969894 ACTTTCAGTGGGAGGAGACG 59.030 55.000 0.00 0.00 0.00 4.18
403 404 0.969894 CTTTCAGTGGGAGGAGACGT 59.030 55.000 0.00 0.00 0.00 4.34
404 405 1.344763 CTTTCAGTGGGAGGAGACGTT 59.655 52.381 0.00 0.00 0.00 3.99
405 406 1.420430 TTCAGTGGGAGGAGACGTTT 58.580 50.000 0.00 0.00 0.00 3.60
406 407 0.966920 TCAGTGGGAGGAGACGTTTC 59.033 55.000 0.00 0.00 0.00 2.78
407 408 0.037232 CAGTGGGAGGAGACGTTTCC 60.037 60.000 17.16 17.16 37.52 3.13
408 409 1.080025 GTGGGAGGAGACGTTTCCG 60.080 63.158 18.59 0.00 42.29 4.30
417 418 4.141883 ACGTTTCCGTCGACGATG 57.858 55.556 37.65 24.66 46.28 3.84
418 419 1.575922 ACGTTTCCGTCGACGATGA 59.424 52.632 37.65 24.38 46.28 2.92
419 420 0.453950 ACGTTTCCGTCGACGATGAG 60.454 55.000 37.65 24.52 46.28 2.90
420 421 1.132199 CGTTTCCGTCGACGATGAGG 61.132 60.000 37.65 20.96 41.53 3.86
421 422 1.153901 TTTCCGTCGACGATGAGGC 60.154 57.895 37.65 0.00 43.02 4.70
428 429 2.353607 GACGATGAGGCGCCTACG 60.354 66.667 32.91 32.91 44.07 3.51
429 430 3.825833 GACGATGAGGCGCCTACGG 62.826 68.421 35.27 25.72 40.57 4.02
430 431 3.900892 CGATGAGGCGCCTACGGT 61.901 66.667 32.97 15.82 40.57 4.83
431 432 2.279517 GATGAGGCGCCTACGGTG 60.280 66.667 32.97 0.00 40.57 4.94
432 433 2.758327 ATGAGGCGCCTACGGTGA 60.758 61.111 32.97 9.65 40.57 4.02
433 434 2.955751 GATGAGGCGCCTACGGTGAC 62.956 65.000 32.97 16.10 42.50 3.67
436 437 2.508663 GGCGCCTACGGTGACTTC 60.509 66.667 22.15 0.00 38.38 3.01
437 438 2.879462 GCGCCTACGGTGACTTCG 60.879 66.667 0.00 0.00 40.57 3.79
438 439 2.564975 CGCCTACGGTGACTTCGT 59.435 61.111 0.00 0.00 43.64 3.85
439 440 1.796151 CGCCTACGGTGACTTCGTA 59.204 57.895 0.00 0.00 41.38 3.43
440 441 0.168788 CGCCTACGGTGACTTCGTAA 59.831 55.000 0.00 0.00 41.62 3.18
441 442 1.401409 CGCCTACGGTGACTTCGTAAA 60.401 52.381 0.00 0.00 41.62 2.01
442 443 2.733227 CGCCTACGGTGACTTCGTAAAT 60.733 50.000 0.00 0.00 41.62 1.40
443 444 2.856557 GCCTACGGTGACTTCGTAAATC 59.143 50.000 0.00 0.00 41.62 2.17
444 445 3.428589 GCCTACGGTGACTTCGTAAATCT 60.429 47.826 0.00 0.00 41.62 2.40
445 446 4.741342 CCTACGGTGACTTCGTAAATCTT 58.259 43.478 0.00 0.00 41.62 2.40
446 447 5.677091 GCCTACGGTGACTTCGTAAATCTTA 60.677 44.000 0.00 0.00 41.62 2.10
447 448 6.324819 CCTACGGTGACTTCGTAAATCTTAA 58.675 40.000 0.00 0.00 41.62 1.85
448 449 6.252228 CCTACGGTGACTTCGTAAATCTTAAC 59.748 42.308 0.00 0.00 41.62 2.01
449 450 5.531634 ACGGTGACTTCGTAAATCTTAACA 58.468 37.500 0.00 0.00 39.22 2.41
450 451 6.161381 ACGGTGACTTCGTAAATCTTAACAT 58.839 36.000 0.00 0.00 39.22 2.71
451 452 6.090358 ACGGTGACTTCGTAAATCTTAACATG 59.910 38.462 0.00 0.00 39.22 3.21
452 453 6.309494 CGGTGACTTCGTAAATCTTAACATGA 59.691 38.462 0.00 0.00 0.00 3.07
453 454 7.010183 CGGTGACTTCGTAAATCTTAACATGAT 59.990 37.037 0.00 0.00 0.00 2.45
454 455 9.309516 GGTGACTTCGTAAATCTTAACATGATA 57.690 33.333 0.00 0.00 0.00 2.15
457 458 9.798885 GACTTCGTAAATCTTAACATGATATGC 57.201 33.333 0.00 0.00 0.00 3.14
458 459 9.325198 ACTTCGTAAATCTTAACATGATATGCA 57.675 29.630 0.00 0.00 0.00 3.96
459 460 9.803130 CTTCGTAAATCTTAACATGATATGCAG 57.197 33.333 0.00 0.00 0.00 4.41
460 461 7.796838 TCGTAAATCTTAACATGATATGCAGC 58.203 34.615 0.00 0.00 0.00 5.25
461 462 7.657354 TCGTAAATCTTAACATGATATGCAGCT 59.343 33.333 0.00 0.00 0.00 4.24
462 463 7.954248 CGTAAATCTTAACATGATATGCAGCTC 59.046 37.037 0.00 0.00 0.00 4.09
463 464 7.812690 AAATCTTAACATGATATGCAGCTCA 57.187 32.000 0.00 3.70 0.00 4.26
464 465 7.436430 AATCTTAACATGATATGCAGCTCAG 57.564 36.000 0.00 2.97 0.00 3.35
465 466 5.922053 TCTTAACATGATATGCAGCTCAGT 58.078 37.500 0.00 3.47 0.00 3.41
466 467 5.987953 TCTTAACATGATATGCAGCTCAGTC 59.012 40.000 0.00 0.00 0.00 3.51
467 468 4.418973 AACATGATATGCAGCTCAGTCT 57.581 40.909 0.00 0.00 0.00 3.24
468 469 3.992643 ACATGATATGCAGCTCAGTCTC 58.007 45.455 0.00 0.00 0.00 3.36
469 470 2.789491 TGATATGCAGCTCAGTCTCG 57.211 50.000 0.00 0.00 0.00 4.04
470 471 1.339291 TGATATGCAGCTCAGTCTCGG 59.661 52.381 0.00 0.00 0.00 4.63
471 472 1.611006 GATATGCAGCTCAGTCTCGGA 59.389 52.381 0.00 0.00 0.00 4.55
472 473 1.028130 TATGCAGCTCAGTCTCGGAG 58.972 55.000 0.00 0.00 35.47 4.63
473 474 1.674764 ATGCAGCTCAGTCTCGGAGG 61.675 60.000 4.96 0.00 32.96 4.30
474 475 2.493973 CAGCTCAGTCTCGGAGGC 59.506 66.667 0.18 0.18 32.96 4.70
475 476 3.137459 AGCTCAGTCTCGGAGGCG 61.137 66.667 3.61 0.00 32.96 5.52
476 477 3.444805 GCTCAGTCTCGGAGGCGT 61.445 66.667 3.61 0.00 32.96 5.68
477 478 2.995872 GCTCAGTCTCGGAGGCGTT 61.996 63.158 3.61 0.00 32.96 4.84
478 479 1.137825 CTCAGTCTCGGAGGCGTTC 59.862 63.158 3.61 0.00 0.00 3.95
479 480 1.587043 CTCAGTCTCGGAGGCGTTCA 61.587 60.000 3.61 0.00 0.00 3.18
480 481 0.965866 TCAGTCTCGGAGGCGTTCAT 60.966 55.000 3.61 0.00 0.00 2.57
481 482 0.738975 CAGTCTCGGAGGCGTTCATA 59.261 55.000 3.61 0.00 0.00 2.15
482 483 1.025812 AGTCTCGGAGGCGTTCATAG 58.974 55.000 3.61 0.00 0.00 2.23
483 484 1.022735 GTCTCGGAGGCGTTCATAGA 58.977 55.000 4.96 0.00 0.00 1.98
484 485 1.002251 GTCTCGGAGGCGTTCATAGAG 60.002 57.143 4.96 0.00 0.00 2.43
485 486 1.025812 CTCGGAGGCGTTCATAGAGT 58.974 55.000 0.00 0.00 0.00 3.24
486 487 1.405821 CTCGGAGGCGTTCATAGAGTT 59.594 52.381 0.00 0.00 0.00 3.01
487 488 2.617308 CTCGGAGGCGTTCATAGAGTTA 59.383 50.000 0.00 0.00 0.00 2.24
488 489 2.617308 TCGGAGGCGTTCATAGAGTTAG 59.383 50.000 0.00 0.00 0.00 2.34
489 490 2.287668 CGGAGGCGTTCATAGAGTTAGG 60.288 54.545 0.00 0.00 0.00 2.69
490 491 2.957006 GGAGGCGTTCATAGAGTTAGGA 59.043 50.000 0.00 0.00 0.00 2.94
491 492 3.574826 GGAGGCGTTCATAGAGTTAGGAT 59.425 47.826 0.00 0.00 0.00 3.24
492 493 4.551388 GAGGCGTTCATAGAGTTAGGATG 58.449 47.826 0.00 0.00 0.00 3.51
493 494 3.961408 AGGCGTTCATAGAGTTAGGATGT 59.039 43.478 0.00 0.00 0.00 3.06
494 495 4.051922 GGCGTTCATAGAGTTAGGATGTG 58.948 47.826 0.00 0.00 0.00 3.21
495 496 3.491267 GCGTTCATAGAGTTAGGATGTGC 59.509 47.826 0.00 0.00 0.00 4.57
496 497 3.731216 CGTTCATAGAGTTAGGATGTGCG 59.269 47.826 0.00 0.00 0.00 5.34
497 498 4.683832 GTTCATAGAGTTAGGATGTGCGT 58.316 43.478 0.00 0.00 0.00 5.24
498 499 4.307443 TCATAGAGTTAGGATGTGCGTG 57.693 45.455 0.00 0.00 0.00 5.34
499 500 3.699538 TCATAGAGTTAGGATGTGCGTGT 59.300 43.478 0.00 0.00 0.00 4.49
500 501 2.370281 AGAGTTAGGATGTGCGTGTG 57.630 50.000 0.00 0.00 0.00 3.82
501 502 1.618837 AGAGTTAGGATGTGCGTGTGT 59.381 47.619 0.00 0.00 0.00 3.72
502 503 2.037251 AGAGTTAGGATGTGCGTGTGTT 59.963 45.455 0.00 0.00 0.00 3.32
503 504 2.806244 GAGTTAGGATGTGCGTGTGTTT 59.194 45.455 0.00 0.00 0.00 2.83
504 505 3.991773 GAGTTAGGATGTGCGTGTGTTTA 59.008 43.478 0.00 0.00 0.00 2.01
505 506 4.575885 AGTTAGGATGTGCGTGTGTTTAT 58.424 39.130 0.00 0.00 0.00 1.40
506 507 5.726397 AGTTAGGATGTGCGTGTGTTTATA 58.274 37.500 0.00 0.00 0.00 0.98
507 508 5.810587 AGTTAGGATGTGCGTGTGTTTATAG 59.189 40.000 0.00 0.00 0.00 1.31
508 509 3.531538 AGGATGTGCGTGTGTTTATAGG 58.468 45.455 0.00 0.00 0.00 2.57
509 510 3.055385 AGGATGTGCGTGTGTTTATAGGT 60.055 43.478 0.00 0.00 0.00 3.08
510 511 3.063452 GGATGTGCGTGTGTTTATAGGTG 59.937 47.826 0.00 0.00 0.00 4.00
511 512 3.388345 TGTGCGTGTGTTTATAGGTGA 57.612 42.857 0.00 0.00 0.00 4.02
512 513 3.322369 TGTGCGTGTGTTTATAGGTGAG 58.678 45.455 0.00 0.00 0.00 3.51
513 514 3.243941 TGTGCGTGTGTTTATAGGTGAGT 60.244 43.478 0.00 0.00 0.00 3.41
514 515 3.122948 GTGCGTGTGTTTATAGGTGAGTG 59.877 47.826 0.00 0.00 0.00 3.51
515 516 2.671396 GCGTGTGTTTATAGGTGAGTGG 59.329 50.000 0.00 0.00 0.00 4.00
516 517 3.863400 GCGTGTGTTTATAGGTGAGTGGT 60.863 47.826 0.00 0.00 0.00 4.16
517 518 4.312443 CGTGTGTTTATAGGTGAGTGGTT 58.688 43.478 0.00 0.00 0.00 3.67
518 519 4.151689 CGTGTGTTTATAGGTGAGTGGTTG 59.848 45.833 0.00 0.00 0.00 3.77
519 520 4.069304 TGTGTTTATAGGTGAGTGGTTGC 58.931 43.478 0.00 0.00 0.00 4.17
520 521 3.124636 GTGTTTATAGGTGAGTGGTTGCG 59.875 47.826 0.00 0.00 0.00 4.85
521 522 3.244284 TGTTTATAGGTGAGTGGTTGCGT 60.244 43.478 0.00 0.00 0.00 5.24
522 523 2.665649 TATAGGTGAGTGGTTGCGTG 57.334 50.000 0.00 0.00 0.00 5.34
523 524 0.685097 ATAGGTGAGTGGTTGCGTGT 59.315 50.000 0.00 0.00 0.00 4.49
524 525 1.330234 TAGGTGAGTGGTTGCGTGTA 58.670 50.000 0.00 0.00 0.00 2.90
525 526 0.685097 AGGTGAGTGGTTGCGTGTAT 59.315 50.000 0.00 0.00 0.00 2.29
526 527 0.796312 GGTGAGTGGTTGCGTGTATG 59.204 55.000 0.00 0.00 0.00 2.39
527 528 1.508632 GTGAGTGGTTGCGTGTATGT 58.491 50.000 0.00 0.00 0.00 2.29
528 529 2.610976 GGTGAGTGGTTGCGTGTATGTA 60.611 50.000 0.00 0.00 0.00 2.29
529 530 2.410730 GTGAGTGGTTGCGTGTATGTAC 59.589 50.000 0.00 0.00 0.00 2.90
530 531 1.652124 GAGTGGTTGCGTGTATGTACG 59.348 52.381 0.00 0.00 46.28 3.67
531 532 1.270274 AGTGGTTGCGTGTATGTACGA 59.730 47.619 7.62 0.00 46.46 3.43
532 533 1.652124 GTGGTTGCGTGTATGTACGAG 59.348 52.381 7.62 0.00 46.46 4.18
533 534 0.643820 GGTTGCGTGTATGTACGAGC 59.356 55.000 7.62 0.00 46.46 5.03
534 535 0.643820 GTTGCGTGTATGTACGAGCC 59.356 55.000 7.62 0.00 46.46 4.70
535 536 0.458889 TTGCGTGTATGTACGAGCCC 60.459 55.000 7.62 0.00 46.46 5.19
536 537 1.317431 TGCGTGTATGTACGAGCCCT 61.317 55.000 7.62 0.00 46.46 5.19
537 538 0.179119 GCGTGTATGTACGAGCCCTT 60.179 55.000 7.62 0.00 46.46 3.95
538 539 1.556564 CGTGTATGTACGAGCCCTTG 58.443 55.000 0.00 0.00 46.46 3.61
539 540 1.135199 CGTGTATGTACGAGCCCTTGT 60.135 52.381 0.00 0.00 46.46 3.16
540 541 2.537401 GTGTATGTACGAGCCCTTGTC 58.463 52.381 0.00 0.00 0.00 3.18
541 542 2.165845 GTGTATGTACGAGCCCTTGTCT 59.834 50.000 0.00 0.00 0.00 3.41
542 543 2.426024 TGTATGTACGAGCCCTTGTCTC 59.574 50.000 0.00 0.00 0.00 3.36
543 544 1.853963 ATGTACGAGCCCTTGTCTCT 58.146 50.000 0.00 0.00 0.00 3.10
544 545 1.629043 TGTACGAGCCCTTGTCTCTT 58.371 50.000 0.00 0.00 0.00 2.85
545 546 1.968493 TGTACGAGCCCTTGTCTCTTT 59.032 47.619 0.00 0.00 0.00 2.52
546 547 3.159472 TGTACGAGCCCTTGTCTCTTTA 58.841 45.455 0.00 0.00 0.00 1.85
547 548 2.745515 ACGAGCCCTTGTCTCTTTAC 57.254 50.000 0.00 0.00 0.00 2.01
548 549 2.249139 ACGAGCCCTTGTCTCTTTACT 58.751 47.619 0.00 0.00 0.00 2.24
549 550 3.428532 ACGAGCCCTTGTCTCTTTACTA 58.571 45.455 0.00 0.00 0.00 1.82
550 551 3.830755 ACGAGCCCTTGTCTCTTTACTAA 59.169 43.478 0.00 0.00 0.00 2.24
551 552 4.466726 ACGAGCCCTTGTCTCTTTACTAAT 59.533 41.667 0.00 0.00 0.00 1.73
552 553 4.806247 CGAGCCCTTGTCTCTTTACTAATG 59.194 45.833 0.00 0.00 0.00 1.90
553 554 5.624738 CGAGCCCTTGTCTCTTTACTAATGT 60.625 44.000 0.00 0.00 0.00 2.71
554 555 6.128138 AGCCCTTGTCTCTTTACTAATGTT 57.872 37.500 0.00 0.00 0.00 2.71
555 556 6.543735 AGCCCTTGTCTCTTTACTAATGTTT 58.456 36.000 0.00 0.00 0.00 2.83
556 557 7.004691 AGCCCTTGTCTCTTTACTAATGTTTT 58.995 34.615 0.00 0.00 0.00 2.43
557 558 8.161425 AGCCCTTGTCTCTTTACTAATGTTTTA 58.839 33.333 0.00 0.00 0.00 1.52
558 559 8.789762 GCCCTTGTCTCTTTACTAATGTTTTAA 58.210 33.333 0.00 0.00 0.00 1.52
582 583 3.685836 AATATTTTAACCGTGCCGAGC 57.314 42.857 0.00 0.00 0.00 5.03
583 584 2.096220 TATTTTAACCGTGCCGAGCA 57.904 45.000 0.00 0.00 35.60 4.26
592 593 2.280797 TGCCGAGCACAAGTCACC 60.281 61.111 0.00 0.00 31.71 4.02
593 594 2.280797 GCCGAGCACAAGTCACCA 60.281 61.111 0.00 0.00 0.00 4.17
594 595 2.607892 GCCGAGCACAAGTCACCAC 61.608 63.158 0.00 0.00 0.00 4.16
595 596 1.227527 CCGAGCACAAGTCACCACA 60.228 57.895 0.00 0.00 0.00 4.17
596 597 1.224069 CCGAGCACAAGTCACCACAG 61.224 60.000 0.00 0.00 0.00 3.66
597 598 0.249447 CGAGCACAAGTCACCACAGA 60.249 55.000 0.00 0.00 0.00 3.41
598 599 1.506493 GAGCACAAGTCACCACAGAG 58.494 55.000 0.00 0.00 0.00 3.35
599 600 0.107456 AGCACAAGTCACCACAGAGG 59.893 55.000 0.00 0.00 45.67 3.69
600 601 0.106708 GCACAAGTCACCACAGAGGA 59.893 55.000 0.00 0.00 41.22 3.71
601 602 1.475034 GCACAAGTCACCACAGAGGAA 60.475 52.381 0.00 0.00 41.22 3.36
602 603 2.917933 CACAAGTCACCACAGAGGAAA 58.082 47.619 0.00 0.00 41.22 3.13
603 604 2.614057 CACAAGTCACCACAGAGGAAAC 59.386 50.000 0.00 0.00 41.22 2.78
604 605 2.222027 CAAGTCACCACAGAGGAAACC 58.778 52.381 0.00 0.00 41.22 3.27
605 606 1.507140 AGTCACCACAGAGGAAACCA 58.493 50.000 0.00 0.00 41.22 3.67
606 607 1.141053 AGTCACCACAGAGGAAACCAC 59.859 52.381 0.00 0.00 41.22 4.16
607 608 1.134220 GTCACCACAGAGGAAACCACA 60.134 52.381 0.00 0.00 41.22 4.17
608 609 1.134220 TCACCACAGAGGAAACCACAC 60.134 52.381 0.00 0.00 41.22 3.82
609 610 0.179056 ACCACAGAGGAAACCACACG 60.179 55.000 0.00 0.00 41.22 4.49
610 611 0.105964 CCACAGAGGAAACCACACGA 59.894 55.000 0.00 0.00 41.22 4.35
611 612 1.217882 CACAGAGGAAACCACACGAC 58.782 55.000 0.00 0.00 0.00 4.34
612 613 0.828022 ACAGAGGAAACCACACGACA 59.172 50.000 0.00 0.00 0.00 4.35
613 614 1.217882 CAGAGGAAACCACACGACAC 58.782 55.000 0.00 0.00 0.00 3.67
614 615 0.106149 AGAGGAAACCACACGACACC 59.894 55.000 0.00 0.00 0.00 4.16
615 616 0.883370 GAGGAAACCACACGACACCC 60.883 60.000 0.00 0.00 0.00 4.61
616 617 1.895231 GGAAACCACACGACACCCC 60.895 63.158 0.00 0.00 0.00 4.95
617 618 1.147600 GAAACCACACGACACCCCT 59.852 57.895 0.00 0.00 0.00 4.79
618 619 0.883370 GAAACCACACGACACCCCTC 60.883 60.000 0.00 0.00 0.00 4.30
619 620 2.653953 AAACCACACGACACCCCTCG 62.654 60.000 0.00 0.00 39.68 4.63
621 622 2.049433 CACACGACACCCCTCGTC 60.049 66.667 0.00 0.00 45.09 4.20
622 623 2.203451 ACACGACACCCCTCGTCT 60.203 61.111 0.00 0.00 45.09 4.18
623 624 1.073722 ACACGACACCCCTCGTCTA 59.926 57.895 0.00 0.00 45.09 2.59
624 625 1.239968 ACACGACACCCCTCGTCTAC 61.240 60.000 0.00 0.00 45.09 2.59
625 626 1.073722 ACGACACCCCTCGTCTACA 59.926 57.895 0.00 0.00 43.43 2.74
626 627 1.239968 ACGACACCCCTCGTCTACAC 61.240 60.000 0.00 0.00 43.43 2.90
627 628 1.239296 CGACACCCCTCGTCTACACA 61.239 60.000 0.00 0.00 0.00 3.72
628 629 1.183549 GACACCCCTCGTCTACACAT 58.816 55.000 0.00 0.00 0.00 3.21
629 630 1.134560 GACACCCCTCGTCTACACATC 59.865 57.143 0.00 0.00 0.00 3.06
630 631 1.272536 ACACCCCTCGTCTACACATCT 60.273 52.381 0.00 0.00 0.00 2.90
631 632 1.405821 CACCCCTCGTCTACACATCTC 59.594 57.143 0.00 0.00 0.00 2.75
716 718 9.485591 GATTGGTAATTTTTACATGTCAGTACG 57.514 33.333 0.00 0.00 0.00 3.67
724 726 6.403333 TTTACATGTCAGTACGAAGATTGC 57.597 37.500 0.00 0.00 0.00 3.56
853 855 2.343758 GCGCTGACTGGGACAAGA 59.656 61.111 0.00 0.00 38.70 3.02
1135 1139 5.046591 AGGGCTAGGTTTAGGAAAATTTTGC 60.047 40.000 14.01 14.01 0.00 3.68
1412 1416 6.772360 TCTTGCCTTATTGATTATGCACAA 57.228 33.333 0.00 0.00 0.00 3.33
2111 2426 5.893897 ATGAAAGAGAAGCAATTGAGGAC 57.106 39.130 10.34 0.00 0.00 3.85
2250 2565 6.777580 AGGAAAACCATAAAGAAGAGAAGCAA 59.222 34.615 0.00 0.00 0.00 3.91
2349 2664 5.296151 TCTTGGAGAACTGAACAAGATGT 57.704 39.130 0.00 0.00 42.95 3.06
2374 2689 3.589951 AGATTAGTGGGCATTGCAGAT 57.410 42.857 11.39 0.00 0.00 2.90
2406 2721 0.105862 ATGGCTGTGCAATGGCCTAT 60.106 50.000 21.14 12.89 45.45 2.57
2552 2867 7.615582 ACTCCACTATGTAATGTGAACAATG 57.384 36.000 0.00 0.00 36.38 2.82
2553 2868 6.599244 ACTCCACTATGTAATGTGAACAATGG 59.401 38.462 0.00 0.00 36.38 3.16
2554 2869 6.480763 TCCACTATGTAATGTGAACAATGGT 58.519 36.000 0.00 0.00 36.38 3.55
2555 2870 6.945435 TCCACTATGTAATGTGAACAATGGTT 59.055 34.615 0.00 0.00 40.76 3.67
2556 2871 7.028962 CCACTATGTAATGTGAACAATGGTTG 58.971 38.462 0.00 0.00 37.36 3.77
2558 2873 7.538334 CACTATGTAATGTGAACAATGGTTGTG 59.462 37.037 0.00 0.00 44.59 3.33
2559 2874 5.843673 TGTAATGTGAACAATGGTTGTGT 57.156 34.783 0.00 0.00 44.59 3.72
2560 2875 6.944234 TGTAATGTGAACAATGGTTGTGTA 57.056 33.333 0.00 0.00 44.59 2.90
2561 2876 7.517614 TGTAATGTGAACAATGGTTGTGTAT 57.482 32.000 0.00 0.00 44.59 2.29
2562 2877 7.946207 TGTAATGTGAACAATGGTTGTGTATT 58.054 30.769 0.00 0.00 44.59 1.89
2563 2878 8.079203 TGTAATGTGAACAATGGTTGTGTATTC 58.921 33.333 0.00 0.00 44.59 1.75
2564 2879 5.446143 TGTGAACAATGGTTGTGTATTCC 57.554 39.130 0.00 0.00 44.59 3.01
2565 2880 5.136828 TGTGAACAATGGTTGTGTATTCCT 58.863 37.500 0.00 0.00 44.59 3.36
2566 2881 6.299922 TGTGAACAATGGTTGTGTATTCCTA 58.700 36.000 0.00 0.00 44.59 2.94
3064 4151 1.620259 CTCTCCCAGCTCCTCTCCT 59.380 63.158 0.00 0.00 0.00 3.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 9.852091 GAAATAAATTTCAGAAGATGCTGACTT 57.148 29.630 9.95 0.00 44.08 3.01
19 20 9.771534 AGGAAATCGTTGGAAAATTGAAATAAA 57.228 25.926 0.00 0.00 0.00 1.40
20 21 9.771534 AAGGAAATCGTTGGAAAATTGAAATAA 57.228 25.926 0.00 0.00 0.00 1.40
21 22 9.771534 AAAGGAAATCGTTGGAAAATTGAAATA 57.228 25.926 0.00 0.00 0.00 1.40
22 23 8.675705 AAAGGAAATCGTTGGAAAATTGAAAT 57.324 26.923 0.00 0.00 0.00 2.17
23 24 7.766278 TGAAAGGAAATCGTTGGAAAATTGAAA 59.234 29.630 0.00 0.00 0.00 2.69
24 25 7.268586 TGAAAGGAAATCGTTGGAAAATTGAA 58.731 30.769 0.00 0.00 0.00 2.69
25 26 6.810911 TGAAAGGAAATCGTTGGAAAATTGA 58.189 32.000 0.00 0.00 0.00 2.57
26 27 7.656707 ATGAAAGGAAATCGTTGGAAAATTG 57.343 32.000 0.00 0.00 0.00 2.32
27 28 8.802267 TCTATGAAAGGAAATCGTTGGAAAATT 58.198 29.630 0.00 0.00 0.00 1.82
28 29 8.348285 TCTATGAAAGGAAATCGTTGGAAAAT 57.652 30.769 0.00 0.00 0.00 1.82
29 30 7.753309 TCTATGAAAGGAAATCGTTGGAAAA 57.247 32.000 0.00 0.00 0.00 2.29
30 31 7.663905 TCTTCTATGAAAGGAAATCGTTGGAAA 59.336 33.333 0.00 0.00 0.00 3.13
31 32 7.165485 TCTTCTATGAAAGGAAATCGTTGGAA 58.835 34.615 0.00 0.00 0.00 3.53
32 33 6.707290 TCTTCTATGAAAGGAAATCGTTGGA 58.293 36.000 0.00 0.00 0.00 3.53
33 34 6.985188 TCTTCTATGAAAGGAAATCGTTGG 57.015 37.500 0.00 0.00 0.00 3.77
34 35 8.256611 TCTTCTTCTATGAAAGGAAATCGTTG 57.743 34.615 0.00 0.00 0.00 4.10
35 36 8.887717 CATCTTCTTCTATGAAAGGAAATCGTT 58.112 33.333 0.00 0.00 0.00 3.85
36 37 8.043710 ACATCTTCTTCTATGAAAGGAAATCGT 58.956 33.333 0.00 0.00 0.00 3.73
37 38 8.430801 ACATCTTCTTCTATGAAAGGAAATCG 57.569 34.615 0.00 0.00 0.00 3.34
38 39 8.835439 GGACATCTTCTTCTATGAAAGGAAATC 58.165 37.037 0.00 0.00 0.00 2.17
39 40 7.777440 GGGACATCTTCTTCTATGAAAGGAAAT 59.223 37.037 0.00 0.00 0.00 2.17
40 41 7.112779 GGGACATCTTCTTCTATGAAAGGAAA 58.887 38.462 0.00 0.00 0.00 3.13
41 42 6.353082 GGGGACATCTTCTTCTATGAAAGGAA 60.353 42.308 0.00 0.00 0.00 3.36
42 43 5.131142 GGGGACATCTTCTTCTATGAAAGGA 59.869 44.000 0.00 0.00 0.00 3.36
43 44 5.372373 GGGGACATCTTCTTCTATGAAAGG 58.628 45.833 0.00 0.00 0.00 3.11
44 45 5.053145 CGGGGACATCTTCTTCTATGAAAG 58.947 45.833 0.00 0.00 0.00 2.62
45 46 4.469945 ACGGGGACATCTTCTTCTATGAAA 59.530 41.667 0.00 0.00 0.00 2.69
46 47 4.030913 ACGGGGACATCTTCTTCTATGAA 58.969 43.478 0.00 0.00 0.00 2.57
47 48 3.637229 GACGGGGACATCTTCTTCTATGA 59.363 47.826 0.00 0.00 0.00 2.15
48 49 3.384789 TGACGGGGACATCTTCTTCTATG 59.615 47.826 0.00 0.00 0.00 2.23
49 50 3.643237 TGACGGGGACATCTTCTTCTAT 58.357 45.455 0.00 0.00 0.00 1.98
50 51 3.095912 TGACGGGGACATCTTCTTCTA 57.904 47.619 0.00 0.00 0.00 2.10
51 52 1.938585 TGACGGGGACATCTTCTTCT 58.061 50.000 0.00 0.00 0.00 2.85
52 53 2.028020 AGTTGACGGGGACATCTTCTTC 60.028 50.000 0.00 0.00 0.00 2.87
53 54 1.978580 AGTTGACGGGGACATCTTCTT 59.021 47.619 0.00 0.00 0.00 2.52
54 55 1.645710 AGTTGACGGGGACATCTTCT 58.354 50.000 0.00 0.00 0.00 2.85
55 56 3.132289 TCATAGTTGACGGGGACATCTTC 59.868 47.826 0.00 0.00 0.00 2.87
56 57 3.104512 TCATAGTTGACGGGGACATCTT 58.895 45.455 0.00 0.00 0.00 2.40
57 58 2.747177 TCATAGTTGACGGGGACATCT 58.253 47.619 0.00 0.00 0.00 2.90
58 59 3.458189 CTTCATAGTTGACGGGGACATC 58.542 50.000 0.00 0.00 0.00 3.06
59 60 2.420129 GCTTCATAGTTGACGGGGACAT 60.420 50.000 0.00 0.00 0.00 3.06
60 61 1.066430 GCTTCATAGTTGACGGGGACA 60.066 52.381 0.00 0.00 0.00 4.02
61 62 1.653151 GCTTCATAGTTGACGGGGAC 58.347 55.000 0.00 0.00 0.00 4.46
62 63 0.174845 CGCTTCATAGTTGACGGGGA 59.825 55.000 0.00 0.00 32.46 4.81
63 64 0.108329 ACGCTTCATAGTTGACGGGG 60.108 55.000 0.00 0.00 38.08 5.73
64 65 0.999406 CACGCTTCATAGTTGACGGG 59.001 55.000 0.00 0.00 39.20 5.28
65 66 1.390123 CACACGCTTCATAGTTGACGG 59.610 52.381 0.00 0.00 0.00 4.79
66 67 2.058798 ACACACGCTTCATAGTTGACG 58.941 47.619 0.00 0.00 0.00 4.35
67 68 3.057019 TCACACACGCTTCATAGTTGAC 58.943 45.455 0.00 0.00 0.00 3.18
68 69 3.057019 GTCACACACGCTTCATAGTTGA 58.943 45.455 0.00 0.00 0.00 3.18
69 70 2.159973 CGTCACACACGCTTCATAGTTG 60.160 50.000 0.00 0.00 42.87 3.16
70 71 2.058798 CGTCACACACGCTTCATAGTT 58.941 47.619 0.00 0.00 42.87 2.24
71 72 1.698165 CGTCACACACGCTTCATAGT 58.302 50.000 0.00 0.00 42.87 2.12
80 81 0.659123 TGATGACGTCGTCACACACG 60.659 55.000 31.55 2.77 45.65 4.49
81 82 1.483316 TTGATGACGTCGTCACACAC 58.517 50.000 34.24 19.58 45.65 3.82
82 83 2.030274 AGATTGATGACGTCGTCACACA 60.030 45.455 34.24 25.94 45.65 3.72
83 84 2.594654 GAGATTGATGACGTCGTCACAC 59.405 50.000 34.24 28.35 45.65 3.82
84 85 2.227865 TGAGATTGATGACGTCGTCACA 59.772 45.455 34.24 26.15 45.65 3.58
85 86 2.863739 TGAGATTGATGACGTCGTCAC 58.136 47.619 34.24 24.90 45.65 3.67
86 87 3.190535 TCTTGAGATTGATGACGTCGTCA 59.809 43.478 31.55 31.55 46.90 4.35
87 88 3.759418 TCTTGAGATTGATGACGTCGTC 58.241 45.455 27.30 27.30 0.00 4.20
88 89 3.850122 TCTTGAGATTGATGACGTCGT 57.150 42.857 10.75 10.75 0.00 4.34
89 90 4.354587 TCATCTTGAGATTGATGACGTCG 58.645 43.478 11.62 0.00 42.58 5.12
94 95 5.681639 AGCATGTCATCTTGAGATTGATGA 58.318 37.500 0.00 0.00 44.43 2.92
95 96 6.347806 GCTAGCATGTCATCTTGAGATTGATG 60.348 42.308 10.63 0.00 40.82 3.07
96 97 5.701750 GCTAGCATGTCATCTTGAGATTGAT 59.298 40.000 10.63 0.00 26.66 2.57
97 98 5.055144 GCTAGCATGTCATCTTGAGATTGA 58.945 41.667 10.63 0.00 26.66 2.57
98 99 5.057819 AGCTAGCATGTCATCTTGAGATTG 58.942 41.667 18.83 0.00 26.66 2.67
99 100 5.293319 AGCTAGCATGTCATCTTGAGATT 57.707 39.130 18.83 0.00 26.66 2.40
100 101 4.959560 AGCTAGCATGTCATCTTGAGAT 57.040 40.909 18.83 0.00 29.62 2.75
101 102 4.750021 AAGCTAGCATGTCATCTTGAGA 57.250 40.909 18.83 0.00 0.00 3.27
102 103 8.774890 ATATTAAGCTAGCATGTCATCTTGAG 57.225 34.615 18.83 0.00 0.00 3.02
103 104 9.565090 AAATATTAAGCTAGCATGTCATCTTGA 57.435 29.630 18.83 0.00 0.00 3.02
104 105 9.823098 GAAATATTAAGCTAGCATGTCATCTTG 57.177 33.333 18.83 0.00 0.00 3.02
105 106 9.007901 GGAAATATTAAGCTAGCATGTCATCTT 57.992 33.333 18.83 1.96 0.00 2.40
106 107 8.159447 TGGAAATATTAAGCTAGCATGTCATCT 58.841 33.333 18.83 0.00 0.00 2.90
107 108 8.327941 TGGAAATATTAAGCTAGCATGTCATC 57.672 34.615 18.83 5.29 0.00 2.92
108 109 8.696043 TTGGAAATATTAAGCTAGCATGTCAT 57.304 30.769 18.83 3.95 0.00 3.06
109 110 7.255242 GCTTGGAAATATTAAGCTAGCATGTCA 60.255 37.037 18.83 0.00 42.55 3.58
110 111 7.080724 GCTTGGAAATATTAAGCTAGCATGTC 58.919 38.462 18.83 5.57 42.55 3.06
111 112 6.974965 GCTTGGAAATATTAAGCTAGCATGT 58.025 36.000 18.83 4.05 42.55 3.21
125 126 9.607988 TCTATCGTTATGAAAAGCTTGGAAATA 57.392 29.630 0.00 0.00 0.00 1.40
126 127 8.506168 TCTATCGTTATGAAAAGCTTGGAAAT 57.494 30.769 0.00 0.00 0.00 2.17
127 128 7.606456 ACTCTATCGTTATGAAAAGCTTGGAAA 59.394 33.333 0.00 0.00 0.00 3.13
128 129 7.103641 ACTCTATCGTTATGAAAAGCTTGGAA 58.896 34.615 0.00 0.00 0.00 3.53
129 130 6.640518 ACTCTATCGTTATGAAAAGCTTGGA 58.359 36.000 0.00 0.00 0.00 3.53
130 131 6.910536 ACTCTATCGTTATGAAAAGCTTGG 57.089 37.500 0.00 0.00 0.00 3.61
131 132 8.321716 GTGTACTCTATCGTTATGAAAAGCTTG 58.678 37.037 0.00 0.00 0.00 4.01
132 133 8.033038 TGTGTACTCTATCGTTATGAAAAGCTT 58.967 33.333 0.00 0.00 0.00 3.74
133 134 7.544622 TGTGTACTCTATCGTTATGAAAAGCT 58.455 34.615 0.00 0.00 0.00 3.74
134 135 7.751047 TGTGTACTCTATCGTTATGAAAAGC 57.249 36.000 0.00 0.00 0.00 3.51
138 139 9.893305 CACATATGTGTACTCTATCGTTATGAA 57.107 33.333 24.91 0.00 40.96 2.57
156 157 3.181466 TGCTCCTACGAATGCACATATGT 60.181 43.478 1.41 1.41 0.00 2.29
157 158 3.392882 TGCTCCTACGAATGCACATATG 58.607 45.455 0.00 0.00 0.00 1.78
158 159 3.751479 TGCTCCTACGAATGCACATAT 57.249 42.857 0.00 0.00 0.00 1.78
159 160 3.118775 ACTTGCTCCTACGAATGCACATA 60.119 43.478 0.00 0.00 35.01 2.29
160 161 2.283298 CTTGCTCCTACGAATGCACAT 58.717 47.619 0.00 0.00 35.01 3.21
161 162 1.001974 ACTTGCTCCTACGAATGCACA 59.998 47.619 0.00 0.00 35.01 4.57
162 163 1.394917 CACTTGCTCCTACGAATGCAC 59.605 52.381 0.00 0.00 35.01 4.57
163 164 1.001974 ACACTTGCTCCTACGAATGCA 59.998 47.619 0.00 0.00 0.00 3.96
164 165 1.726853 ACACTTGCTCCTACGAATGC 58.273 50.000 0.00 0.00 0.00 3.56
165 166 2.852413 CGTACACTTGCTCCTACGAATG 59.148 50.000 0.00 0.00 35.12 2.67
166 167 2.490903 ACGTACACTTGCTCCTACGAAT 59.509 45.455 3.27 0.00 36.36 3.34
167 168 1.881973 ACGTACACTTGCTCCTACGAA 59.118 47.619 3.27 0.00 36.36 3.85
168 169 1.198408 CACGTACACTTGCTCCTACGA 59.802 52.381 3.27 0.00 36.36 3.43
169 170 1.614385 CACGTACACTTGCTCCTACG 58.386 55.000 0.00 0.00 38.33 3.51
170 171 1.347320 GCACGTACACTTGCTCCTAC 58.653 55.000 3.78 0.00 38.01 3.18
171 172 0.109458 CGCACGTACACTTGCTCCTA 60.109 55.000 8.88 0.00 38.76 2.94
172 173 1.372997 CGCACGTACACTTGCTCCT 60.373 57.895 8.88 0.00 38.76 3.69
173 174 3.011760 GCGCACGTACACTTGCTCC 62.012 63.158 0.30 0.00 38.76 4.70
174 175 2.307309 TGCGCACGTACACTTGCTC 61.307 57.895 5.66 2.11 38.76 4.26
175 176 2.279851 TGCGCACGTACACTTGCT 60.280 55.556 5.66 0.00 38.76 3.91
176 177 2.127758 GTGCGCACGTACACTTGC 60.128 61.111 26.77 0.00 37.71 4.01
186 187 4.326278 ACATATGCTTATATACGTGCGCAC 59.674 41.667 30.42 30.42 0.00 5.34
187 188 4.490743 ACATATGCTTATATACGTGCGCA 58.509 39.130 5.66 5.66 0.00 6.09
188 189 5.742453 AGTACATATGCTTATATACGTGCGC 59.258 40.000 0.00 0.00 0.00 6.09
189 190 6.745907 ACAGTACATATGCTTATATACGTGCG 59.254 38.462 1.58 0.00 0.00 5.34
190 191 8.462143 AACAGTACATATGCTTATATACGTGC 57.538 34.615 1.58 0.00 0.00 5.34
225 226 9.145442 GGTCTTATGTTAGTTTATAGAGGGAGT 57.855 37.037 0.00 0.00 0.00 3.85
226 227 8.298140 CGGTCTTATGTTAGTTTATAGAGGGAG 58.702 40.741 0.00 0.00 0.00 4.30
227 228 7.781693 ACGGTCTTATGTTAGTTTATAGAGGGA 59.218 37.037 0.00 0.00 0.00 4.20
228 229 7.949434 ACGGTCTTATGTTAGTTTATAGAGGG 58.051 38.462 0.00 0.00 0.00 4.30
229 230 9.813446 AAACGGTCTTATGTTAGTTTATAGAGG 57.187 33.333 0.00 0.00 31.14 3.69
246 247 9.832445 ATGTTCACATCTAATATAAACGGTCTT 57.168 29.630 0.00 0.00 28.78 3.01
247 248 9.832445 AATGTTCACATCTAATATAAACGGTCT 57.168 29.630 0.00 0.00 35.10 3.85
261 262 9.574516 ACTCCTTTTAAACTAATGTTCACATCT 57.425 29.630 0.00 0.00 35.10 2.90
264 265 9.841295 AGTACTCCTTTTAAACTAATGTTCACA 57.159 29.630 0.00 0.00 34.96 3.58
266 267 9.498176 GGAGTACTCCTTTTAAACTAATGTTCA 57.502 33.333 31.12 0.00 46.16 3.18
284 285 5.359292 ACGGTTAGAATACTTGGGAGTACTC 59.641 44.000 14.87 14.87 40.98 2.59
285 286 5.267587 ACGGTTAGAATACTTGGGAGTACT 58.732 41.667 0.00 0.00 40.98 2.73
286 287 5.588958 ACGGTTAGAATACTTGGGAGTAC 57.411 43.478 0.00 0.00 40.98 2.73
287 288 5.127682 GGAACGGTTAGAATACTTGGGAGTA 59.872 44.000 0.00 0.00 42.30 2.59
288 289 4.081254 GGAACGGTTAGAATACTTGGGAGT 60.081 45.833 0.00 0.00 39.97 3.85
289 290 4.439968 GGAACGGTTAGAATACTTGGGAG 58.560 47.826 0.00 0.00 0.00 4.30
290 291 3.198417 GGGAACGGTTAGAATACTTGGGA 59.802 47.826 0.00 0.00 0.00 4.37
291 292 3.054948 TGGGAACGGTTAGAATACTTGGG 60.055 47.826 0.00 0.00 0.00 4.12
292 293 4.210724 TGGGAACGGTTAGAATACTTGG 57.789 45.455 0.00 0.00 0.00 3.61
293 294 5.293569 GTGATGGGAACGGTTAGAATACTTG 59.706 44.000 0.00 0.00 0.00 3.16
294 295 5.425630 GTGATGGGAACGGTTAGAATACTT 58.574 41.667 0.00 0.00 0.00 2.24
295 296 4.141779 GGTGATGGGAACGGTTAGAATACT 60.142 45.833 0.00 0.00 0.00 2.12
296 297 4.124970 GGTGATGGGAACGGTTAGAATAC 58.875 47.826 0.00 0.00 0.00 1.89
297 298 3.135167 GGGTGATGGGAACGGTTAGAATA 59.865 47.826 0.00 0.00 0.00 1.75
298 299 2.092592 GGGTGATGGGAACGGTTAGAAT 60.093 50.000 0.00 0.00 0.00 2.40
299 300 1.279846 GGGTGATGGGAACGGTTAGAA 59.720 52.381 0.00 0.00 0.00 2.10
300 301 0.906775 GGGTGATGGGAACGGTTAGA 59.093 55.000 0.00 0.00 0.00 2.10
301 302 0.616371 TGGGTGATGGGAACGGTTAG 59.384 55.000 0.00 0.00 0.00 2.34
302 303 1.210967 GATGGGTGATGGGAACGGTTA 59.789 52.381 0.00 0.00 0.00 2.85
303 304 0.034477 GATGGGTGATGGGAACGGTT 60.034 55.000 0.00 0.00 0.00 4.44
304 305 1.204786 TGATGGGTGATGGGAACGGT 61.205 55.000 0.00 0.00 0.00 4.83
305 306 0.464373 CTGATGGGTGATGGGAACGG 60.464 60.000 0.00 0.00 0.00 4.44
306 307 0.464373 CCTGATGGGTGATGGGAACG 60.464 60.000 0.00 0.00 0.00 3.95
307 308 3.502164 CCTGATGGGTGATGGGAAC 57.498 57.895 0.00 0.00 0.00 3.62
318 319 1.392589 CGGGATTTGAACCCTGATGG 58.607 55.000 0.00 0.00 44.72 3.51
319 320 1.340991 ACCGGGATTTGAACCCTGATG 60.341 52.381 6.32 0.00 44.72 3.07
320 321 0.999712 ACCGGGATTTGAACCCTGAT 59.000 50.000 6.32 0.00 44.72 2.90
321 322 0.037590 CACCGGGATTTGAACCCTGA 59.962 55.000 6.32 0.00 44.72 3.86
322 323 1.595093 GCACCGGGATTTGAACCCTG 61.595 60.000 6.32 0.00 44.72 4.45
323 324 1.304134 GCACCGGGATTTGAACCCT 60.304 57.895 6.32 0.00 44.72 4.34
324 325 1.304134 AGCACCGGGATTTGAACCC 60.304 57.895 6.32 0.00 43.57 4.11
325 326 1.644786 CGAGCACCGGGATTTGAACC 61.645 60.000 6.32 0.00 33.91 3.62
326 327 1.794222 CGAGCACCGGGATTTGAAC 59.206 57.895 6.32 0.00 33.91 3.18
327 328 2.038269 GCGAGCACCGGGATTTGAA 61.038 57.895 6.32 0.00 39.04 2.69
328 329 2.435938 GCGAGCACCGGGATTTGA 60.436 61.111 6.32 0.00 39.04 2.69
329 330 1.656818 AATGCGAGCACCGGGATTTG 61.657 55.000 6.32 0.00 39.04 2.32
330 331 0.965363 AAATGCGAGCACCGGGATTT 60.965 50.000 6.32 0.00 39.04 2.17
331 332 0.107410 TAAATGCGAGCACCGGGATT 60.107 50.000 6.32 0.00 39.04 3.01
332 333 0.108585 ATAAATGCGAGCACCGGGAT 59.891 50.000 6.32 0.00 39.04 3.85
333 334 0.531974 GATAAATGCGAGCACCGGGA 60.532 55.000 6.32 0.00 39.04 5.14
334 335 0.532862 AGATAAATGCGAGCACCGGG 60.533 55.000 6.32 0.00 39.04 5.73
335 336 1.003545 CAAGATAAATGCGAGCACCGG 60.004 52.381 0.00 0.00 39.04 5.28
336 337 1.003545 CCAAGATAAATGCGAGCACCG 60.004 52.381 0.00 0.00 42.21 4.94
337 338 2.288666 TCCAAGATAAATGCGAGCACC 58.711 47.619 0.00 0.00 0.00 5.01
338 339 4.558538 AATCCAAGATAAATGCGAGCAC 57.441 40.909 0.00 0.00 0.00 4.40
339 340 6.882610 ATAAATCCAAGATAAATGCGAGCA 57.117 33.333 0.00 0.00 0.00 4.26
340 341 7.862372 TGAAATAAATCCAAGATAAATGCGAGC 59.138 33.333 0.00 0.00 0.00 5.03
341 342 9.390795 CTGAAATAAATCCAAGATAAATGCGAG 57.609 33.333 0.00 0.00 0.00 5.03
342 343 8.352201 CCTGAAATAAATCCAAGATAAATGCGA 58.648 33.333 0.00 0.00 0.00 5.10
343 344 8.352201 TCCTGAAATAAATCCAAGATAAATGCG 58.648 33.333 0.00 0.00 0.00 4.73
344 345 9.688592 CTCCTGAAATAAATCCAAGATAAATGC 57.311 33.333 0.00 0.00 0.00 3.56
348 349 9.408648 GGAACTCCTGAAATAAATCCAAGATAA 57.591 33.333 0.00 0.00 0.00 1.75
349 350 7.715249 CGGAACTCCTGAAATAAATCCAAGATA 59.285 37.037 0.00 0.00 0.00 1.98
350 351 6.543831 CGGAACTCCTGAAATAAATCCAAGAT 59.456 38.462 0.00 0.00 0.00 2.40
351 352 5.880332 CGGAACTCCTGAAATAAATCCAAGA 59.120 40.000 0.00 0.00 0.00 3.02
352 353 5.880332 TCGGAACTCCTGAAATAAATCCAAG 59.120 40.000 0.00 0.00 0.00 3.61
353 354 5.646360 GTCGGAACTCCTGAAATAAATCCAA 59.354 40.000 0.00 0.00 0.00 3.53
354 355 5.183228 GTCGGAACTCCTGAAATAAATCCA 58.817 41.667 0.00 0.00 0.00 3.41
355 356 4.270325 CGTCGGAACTCCTGAAATAAATCC 59.730 45.833 0.00 0.00 0.00 3.01
356 357 5.107133 TCGTCGGAACTCCTGAAATAAATC 58.893 41.667 0.00 0.00 0.00 2.17
357 358 5.080969 TCGTCGGAACTCCTGAAATAAAT 57.919 39.130 0.00 0.00 0.00 1.40
358 359 4.524316 TCGTCGGAACTCCTGAAATAAA 57.476 40.909 0.00 0.00 0.00 1.40
359 360 4.730949 ATCGTCGGAACTCCTGAAATAA 57.269 40.909 0.00 0.00 0.00 1.40
360 361 4.641541 TGTATCGTCGGAACTCCTGAAATA 59.358 41.667 0.00 0.00 0.00 1.40
361 362 3.446161 TGTATCGTCGGAACTCCTGAAAT 59.554 43.478 0.00 0.00 0.00 2.17
362 363 2.821378 TGTATCGTCGGAACTCCTGAAA 59.179 45.455 0.00 0.00 0.00 2.69
363 364 2.163010 GTGTATCGTCGGAACTCCTGAA 59.837 50.000 0.00 0.00 0.00 3.02
364 365 1.741706 GTGTATCGTCGGAACTCCTGA 59.258 52.381 0.00 0.00 0.00 3.86
365 366 1.743958 AGTGTATCGTCGGAACTCCTG 59.256 52.381 0.00 0.00 0.00 3.86
366 367 2.125773 AGTGTATCGTCGGAACTCCT 57.874 50.000 0.00 0.00 0.00 3.69
367 368 2.935481 AAGTGTATCGTCGGAACTCC 57.065 50.000 0.00 0.00 0.00 3.85
368 369 3.829948 TGAAAGTGTATCGTCGGAACTC 58.170 45.455 0.00 0.00 0.00 3.01
369 370 3.834610 CTGAAAGTGTATCGTCGGAACT 58.165 45.455 0.00 0.00 0.00 3.01
384 385 0.969894 ACGTCTCCTCCCACTGAAAG 59.030 55.000 0.00 0.00 42.29 2.62
385 386 1.420430 AACGTCTCCTCCCACTGAAA 58.580 50.000 0.00 0.00 0.00 2.69
386 387 1.343465 GAAACGTCTCCTCCCACTGAA 59.657 52.381 0.00 0.00 0.00 3.02
387 388 0.966920 GAAACGTCTCCTCCCACTGA 59.033 55.000 0.00 0.00 0.00 3.41
388 389 0.037232 GGAAACGTCTCCTCCCACTG 60.037 60.000 0.00 0.00 32.21 3.66
389 390 2.363297 GGAAACGTCTCCTCCCACT 58.637 57.895 0.00 0.00 32.21 4.00
402 403 1.411493 GCCTCATCGTCGACGGAAAC 61.411 60.000 35.05 17.44 40.29 2.78
403 404 1.153901 GCCTCATCGTCGACGGAAA 60.154 57.895 35.05 18.80 40.29 3.13
404 405 2.488355 GCCTCATCGTCGACGGAA 59.512 61.111 35.05 19.57 40.29 4.30
405 406 3.872728 CGCCTCATCGTCGACGGA 61.873 66.667 35.05 24.26 40.29 4.69
408 409 2.831366 TAGGCGCCTCATCGTCGAC 61.831 63.158 36.73 5.18 39.34 4.20
409 410 2.515290 TAGGCGCCTCATCGTCGA 60.515 61.111 36.73 10.36 39.34 4.20
410 411 2.353607 GTAGGCGCCTCATCGTCG 60.354 66.667 36.73 0.00 39.34 5.12
411 412 2.353607 CGTAGGCGCCTCATCGTC 60.354 66.667 36.73 15.88 0.00 4.20
412 413 3.900892 CCGTAGGCGCCTCATCGT 61.901 66.667 36.73 11.27 46.14 3.73
424 425 6.803320 TGTTAAGATTTACGAAGTCACCGTAG 59.197 38.462 0.00 0.00 43.93 3.51
425 426 6.676950 TGTTAAGATTTACGAAGTCACCGTA 58.323 36.000 0.00 0.00 43.93 4.02
426 427 5.531634 TGTTAAGATTTACGAAGTCACCGT 58.468 37.500 0.00 0.00 43.93 4.83
427 428 6.309494 TCATGTTAAGATTTACGAAGTCACCG 59.691 38.462 0.00 0.00 43.93 4.94
428 429 7.591006 TCATGTTAAGATTTACGAAGTCACC 57.409 36.000 0.00 0.00 43.93 4.02
431 432 9.798885 GCATATCATGTTAAGATTTACGAAGTC 57.201 33.333 0.00 0.00 43.93 3.01
433 434 9.803130 CTGCATATCATGTTAAGATTTACGAAG 57.197 33.333 0.00 0.00 0.00 3.79
434 435 8.282592 GCTGCATATCATGTTAAGATTTACGAA 58.717 33.333 0.00 0.00 0.00 3.85
435 436 7.657354 AGCTGCATATCATGTTAAGATTTACGA 59.343 33.333 1.02 0.00 0.00 3.43
436 437 7.800767 AGCTGCATATCATGTTAAGATTTACG 58.199 34.615 1.02 0.00 0.00 3.18
437 438 8.777413 TGAGCTGCATATCATGTTAAGATTTAC 58.223 33.333 1.02 0.00 0.00 2.01
438 439 8.907222 TGAGCTGCATATCATGTTAAGATTTA 57.093 30.769 1.02 0.00 0.00 1.40
439 440 7.501559 ACTGAGCTGCATATCATGTTAAGATTT 59.498 33.333 1.02 0.00 0.00 2.17
440 441 6.996879 ACTGAGCTGCATATCATGTTAAGATT 59.003 34.615 1.02 0.00 0.00 2.40
441 442 6.531923 ACTGAGCTGCATATCATGTTAAGAT 58.468 36.000 1.02 0.00 0.00 2.40
442 443 5.922053 ACTGAGCTGCATATCATGTTAAGA 58.078 37.500 1.02 0.00 0.00 2.10
443 444 5.990386 AGACTGAGCTGCATATCATGTTAAG 59.010 40.000 1.02 0.00 0.00 1.85
444 445 5.922053 AGACTGAGCTGCATATCATGTTAA 58.078 37.500 1.02 0.00 0.00 2.01
445 446 5.536260 GAGACTGAGCTGCATATCATGTTA 58.464 41.667 1.02 0.00 0.00 2.41
446 447 4.378774 GAGACTGAGCTGCATATCATGTT 58.621 43.478 1.02 0.00 0.00 2.71
447 448 3.552478 CGAGACTGAGCTGCATATCATGT 60.552 47.826 1.02 3.27 0.00 3.21
448 449 2.987821 CGAGACTGAGCTGCATATCATG 59.012 50.000 1.02 0.00 0.00 3.07
449 450 2.029200 CCGAGACTGAGCTGCATATCAT 60.029 50.000 1.02 0.00 0.00 2.45
450 451 1.339291 CCGAGACTGAGCTGCATATCA 59.661 52.381 1.02 0.00 0.00 2.15
451 452 1.611006 TCCGAGACTGAGCTGCATATC 59.389 52.381 1.02 0.00 0.00 1.63
452 453 1.612950 CTCCGAGACTGAGCTGCATAT 59.387 52.381 1.02 0.00 0.00 1.78
453 454 1.028130 CTCCGAGACTGAGCTGCATA 58.972 55.000 1.02 0.00 0.00 3.14
454 455 1.674764 CCTCCGAGACTGAGCTGCAT 61.675 60.000 1.02 0.00 0.00 3.96
455 456 2.346541 CCTCCGAGACTGAGCTGCA 61.347 63.158 1.02 0.00 0.00 4.41
456 457 2.493973 CCTCCGAGACTGAGCTGC 59.506 66.667 0.00 0.00 0.00 5.25
457 458 2.493973 GCCTCCGAGACTGAGCTG 59.506 66.667 0.00 0.00 0.00 4.24
458 459 3.137459 CGCCTCCGAGACTGAGCT 61.137 66.667 0.00 0.00 36.29 4.09
459 460 2.875684 GAACGCCTCCGAGACTGAGC 62.876 65.000 0.00 0.00 38.29 4.26
460 461 1.137825 GAACGCCTCCGAGACTGAG 59.862 63.158 0.00 0.00 38.29 3.35
461 462 0.965866 ATGAACGCCTCCGAGACTGA 60.966 55.000 0.00 0.00 38.29 3.41
462 463 0.738975 TATGAACGCCTCCGAGACTG 59.261 55.000 0.00 0.00 38.29 3.51
463 464 1.025812 CTATGAACGCCTCCGAGACT 58.974 55.000 0.00 0.00 38.29 3.24
464 465 1.002251 CTCTATGAACGCCTCCGAGAC 60.002 57.143 0.00 0.00 38.29 3.36
465 466 1.309950 CTCTATGAACGCCTCCGAGA 58.690 55.000 0.00 0.00 38.29 4.04
466 467 1.025812 ACTCTATGAACGCCTCCGAG 58.974 55.000 0.00 0.00 38.29 4.63
467 468 1.471119 AACTCTATGAACGCCTCCGA 58.529 50.000 0.00 0.00 38.29 4.55
468 469 2.287668 CCTAACTCTATGAACGCCTCCG 60.288 54.545 0.00 0.00 41.14 4.63
469 470 2.957006 TCCTAACTCTATGAACGCCTCC 59.043 50.000 0.00 0.00 0.00 4.30
470 471 4.038162 ACATCCTAACTCTATGAACGCCTC 59.962 45.833 0.00 0.00 0.00 4.70
471 472 3.961408 ACATCCTAACTCTATGAACGCCT 59.039 43.478 0.00 0.00 0.00 5.52
472 473 4.051922 CACATCCTAACTCTATGAACGCC 58.948 47.826 0.00 0.00 0.00 5.68
473 474 3.491267 GCACATCCTAACTCTATGAACGC 59.509 47.826 0.00 0.00 0.00 4.84
474 475 3.731216 CGCACATCCTAACTCTATGAACG 59.269 47.826 0.00 0.00 0.00 3.95
475 476 4.504461 CACGCACATCCTAACTCTATGAAC 59.496 45.833 0.00 0.00 0.00 3.18
476 477 4.159693 ACACGCACATCCTAACTCTATGAA 59.840 41.667 0.00 0.00 0.00 2.57
477 478 3.699538 ACACGCACATCCTAACTCTATGA 59.300 43.478 0.00 0.00 0.00 2.15
478 479 3.798878 CACACGCACATCCTAACTCTATG 59.201 47.826 0.00 0.00 0.00 2.23
479 480 3.447586 ACACACGCACATCCTAACTCTAT 59.552 43.478 0.00 0.00 0.00 1.98
480 481 2.823747 ACACACGCACATCCTAACTCTA 59.176 45.455 0.00 0.00 0.00 2.43
481 482 1.618837 ACACACGCACATCCTAACTCT 59.381 47.619 0.00 0.00 0.00 3.24
482 483 2.080286 ACACACGCACATCCTAACTC 57.920 50.000 0.00 0.00 0.00 3.01
483 484 2.543777 AACACACGCACATCCTAACT 57.456 45.000 0.00 0.00 0.00 2.24
484 485 4.939509 ATAAACACACGCACATCCTAAC 57.060 40.909 0.00 0.00 0.00 2.34
485 486 5.113383 CCTATAAACACACGCACATCCTAA 58.887 41.667 0.00 0.00 0.00 2.69
486 487 4.160814 ACCTATAAACACACGCACATCCTA 59.839 41.667 0.00 0.00 0.00 2.94
487 488 3.055385 ACCTATAAACACACGCACATCCT 60.055 43.478 0.00 0.00 0.00 3.24
488 489 3.063452 CACCTATAAACACACGCACATCC 59.937 47.826 0.00 0.00 0.00 3.51
489 490 3.930229 TCACCTATAAACACACGCACATC 59.070 43.478 0.00 0.00 0.00 3.06
490 491 3.932710 CTCACCTATAAACACACGCACAT 59.067 43.478 0.00 0.00 0.00 3.21
491 492 3.243941 ACTCACCTATAAACACACGCACA 60.244 43.478 0.00 0.00 0.00 4.57
492 493 3.122948 CACTCACCTATAAACACACGCAC 59.877 47.826 0.00 0.00 0.00 5.34
493 494 3.322369 CACTCACCTATAAACACACGCA 58.678 45.455 0.00 0.00 0.00 5.24
494 495 2.671396 CCACTCACCTATAAACACACGC 59.329 50.000 0.00 0.00 0.00 5.34
495 496 3.921677 ACCACTCACCTATAAACACACG 58.078 45.455 0.00 0.00 0.00 4.49
496 497 4.083484 GCAACCACTCACCTATAAACACAC 60.083 45.833 0.00 0.00 0.00 3.82
497 498 4.069304 GCAACCACTCACCTATAAACACA 58.931 43.478 0.00 0.00 0.00 3.72
498 499 3.124636 CGCAACCACTCACCTATAAACAC 59.875 47.826 0.00 0.00 0.00 3.32
499 500 3.244284 ACGCAACCACTCACCTATAAACA 60.244 43.478 0.00 0.00 0.00 2.83
500 501 3.124636 CACGCAACCACTCACCTATAAAC 59.875 47.826 0.00 0.00 0.00 2.01
501 502 3.244284 ACACGCAACCACTCACCTATAAA 60.244 43.478 0.00 0.00 0.00 1.40
502 503 2.300723 ACACGCAACCACTCACCTATAA 59.699 45.455 0.00 0.00 0.00 0.98
503 504 1.897133 ACACGCAACCACTCACCTATA 59.103 47.619 0.00 0.00 0.00 1.31
504 505 0.685097 ACACGCAACCACTCACCTAT 59.315 50.000 0.00 0.00 0.00 2.57
505 506 1.330234 TACACGCAACCACTCACCTA 58.670 50.000 0.00 0.00 0.00 3.08
506 507 0.685097 ATACACGCAACCACTCACCT 59.315 50.000 0.00 0.00 0.00 4.00
507 508 0.796312 CATACACGCAACCACTCACC 59.204 55.000 0.00 0.00 0.00 4.02
508 509 1.508632 ACATACACGCAACCACTCAC 58.491 50.000 0.00 0.00 0.00 3.51
509 510 2.679450 GTACATACACGCAACCACTCA 58.321 47.619 0.00 0.00 0.00 3.41
510 511 1.652124 CGTACATACACGCAACCACTC 59.348 52.381 0.00 0.00 34.78 3.51
511 512 1.270274 TCGTACATACACGCAACCACT 59.730 47.619 0.00 0.00 41.67 4.00
512 513 1.652124 CTCGTACATACACGCAACCAC 59.348 52.381 0.00 0.00 41.67 4.16
513 514 1.985334 CTCGTACATACACGCAACCA 58.015 50.000 0.00 0.00 41.67 3.67
514 515 0.643820 GCTCGTACATACACGCAACC 59.356 55.000 0.00 0.00 41.67 3.77
515 516 0.643820 GGCTCGTACATACACGCAAC 59.356 55.000 0.00 0.00 41.67 4.17
516 517 0.458889 GGGCTCGTACATACACGCAA 60.459 55.000 0.00 0.00 41.67 4.85
517 518 1.140161 GGGCTCGTACATACACGCA 59.860 57.895 0.00 0.00 41.67 5.24
518 519 0.179119 AAGGGCTCGTACATACACGC 60.179 55.000 0.00 0.00 41.67 5.34
519 520 1.135199 ACAAGGGCTCGTACATACACG 60.135 52.381 0.00 0.00 43.28 4.49
520 521 2.165845 AGACAAGGGCTCGTACATACAC 59.834 50.000 0.00 0.00 0.00 2.90
521 522 2.426024 GAGACAAGGGCTCGTACATACA 59.574 50.000 0.00 0.00 0.00 2.29
522 523 2.688958 AGAGACAAGGGCTCGTACATAC 59.311 50.000 0.00 0.00 37.46 2.39
523 524 3.014304 AGAGACAAGGGCTCGTACATA 57.986 47.619 0.00 0.00 37.46 2.29
524 525 1.853963 AGAGACAAGGGCTCGTACAT 58.146 50.000 0.00 0.00 37.46 2.29
525 526 1.629043 AAGAGACAAGGGCTCGTACA 58.371 50.000 0.00 0.00 37.46 2.90
526 527 2.745515 AAAGAGACAAGGGCTCGTAC 57.254 50.000 0.00 0.00 37.46 3.67
527 528 3.428532 AGTAAAGAGACAAGGGCTCGTA 58.571 45.455 0.00 0.00 37.46 3.43
528 529 2.249139 AGTAAAGAGACAAGGGCTCGT 58.751 47.619 0.00 0.00 37.46 4.18
529 530 4.451629 TTAGTAAAGAGACAAGGGCTCG 57.548 45.455 0.00 0.00 37.46 5.03
530 531 5.735766 ACATTAGTAAAGAGACAAGGGCTC 58.264 41.667 0.00 0.00 0.00 4.70
531 532 5.763876 ACATTAGTAAAGAGACAAGGGCT 57.236 39.130 0.00 0.00 0.00 5.19
532 533 6.819397 AAACATTAGTAAAGAGACAAGGGC 57.181 37.500 0.00 0.00 0.00 5.19
575 576 2.280797 GGTGACTTGTGCTCGGCA 60.281 61.111 0.00 0.00 35.60 5.69
576 577 2.280797 TGGTGACTTGTGCTCGGC 60.281 61.111 0.00 0.00 0.00 5.54
577 578 1.224069 CTGTGGTGACTTGTGCTCGG 61.224 60.000 0.00 0.00 0.00 4.63
578 579 0.249447 TCTGTGGTGACTTGTGCTCG 60.249 55.000 0.00 0.00 0.00 5.03
579 580 1.506493 CTCTGTGGTGACTTGTGCTC 58.494 55.000 0.00 0.00 0.00 4.26
580 581 0.107456 CCTCTGTGGTGACTTGTGCT 59.893 55.000 0.00 0.00 0.00 4.40
581 582 0.106708 TCCTCTGTGGTGACTTGTGC 59.893 55.000 0.00 0.00 37.07 4.57
582 583 2.614057 GTTTCCTCTGTGGTGACTTGTG 59.386 50.000 0.00 0.00 37.07 3.33
583 584 2.421529 GGTTTCCTCTGTGGTGACTTGT 60.422 50.000 0.00 0.00 37.07 3.16
584 585 2.222027 GGTTTCCTCTGTGGTGACTTG 58.778 52.381 0.00 0.00 37.07 3.16
585 586 1.843851 TGGTTTCCTCTGTGGTGACTT 59.156 47.619 0.00 0.00 37.07 3.01
586 587 1.141053 GTGGTTTCCTCTGTGGTGACT 59.859 52.381 0.00 0.00 37.07 3.41
587 588 1.134220 TGTGGTTTCCTCTGTGGTGAC 60.134 52.381 0.00 0.00 37.07 3.67
588 589 1.134220 GTGTGGTTTCCTCTGTGGTGA 60.134 52.381 0.00 0.00 37.07 4.02
589 590 1.308998 GTGTGGTTTCCTCTGTGGTG 58.691 55.000 0.00 0.00 37.07 4.17
590 591 0.179056 CGTGTGGTTTCCTCTGTGGT 60.179 55.000 0.00 0.00 37.07 4.16
591 592 0.105964 TCGTGTGGTTTCCTCTGTGG 59.894 55.000 0.00 0.00 37.10 4.17
592 593 1.217882 GTCGTGTGGTTTCCTCTGTG 58.782 55.000 0.00 0.00 0.00 3.66
593 594 0.828022 TGTCGTGTGGTTTCCTCTGT 59.172 50.000 0.00 0.00 0.00 3.41
594 595 1.217882 GTGTCGTGTGGTTTCCTCTG 58.782 55.000 0.00 0.00 0.00 3.35
595 596 0.106149 GGTGTCGTGTGGTTTCCTCT 59.894 55.000 0.00 0.00 0.00 3.69
596 597 0.883370 GGGTGTCGTGTGGTTTCCTC 60.883 60.000 0.00 0.00 0.00 3.71
597 598 1.147600 GGGTGTCGTGTGGTTTCCT 59.852 57.895 0.00 0.00 0.00 3.36
598 599 1.895231 GGGGTGTCGTGTGGTTTCC 60.895 63.158 0.00 0.00 0.00 3.13
599 600 0.883370 GAGGGGTGTCGTGTGGTTTC 60.883 60.000 0.00 0.00 0.00 2.78
600 601 1.147600 GAGGGGTGTCGTGTGGTTT 59.852 57.895 0.00 0.00 0.00 3.27
601 602 2.826702 GAGGGGTGTCGTGTGGTT 59.173 61.111 0.00 0.00 0.00 3.67
602 603 3.612681 CGAGGGGTGTCGTGTGGT 61.613 66.667 0.00 0.00 35.14 4.16
608 609 1.239296 TGTGTAGACGAGGGGTGTCG 61.239 60.000 0.00 0.00 45.76 4.35
609 610 1.134560 GATGTGTAGACGAGGGGTGTC 59.865 57.143 0.00 0.00 36.60 3.67
610 611 1.183549 GATGTGTAGACGAGGGGTGT 58.816 55.000 0.00 0.00 0.00 4.16
611 612 1.405821 GAGATGTGTAGACGAGGGGTG 59.594 57.143 0.00 0.00 0.00 4.61
612 613 1.685491 GGAGATGTGTAGACGAGGGGT 60.685 57.143 0.00 0.00 0.00 4.95
613 614 1.033574 GGAGATGTGTAGACGAGGGG 58.966 60.000 0.00 0.00 0.00 4.79
614 615 1.405821 GTGGAGATGTGTAGACGAGGG 59.594 57.143 0.00 0.00 0.00 4.30
615 616 1.064208 CGTGGAGATGTGTAGACGAGG 59.936 57.143 0.00 0.00 0.00 4.63
616 617 2.007608 TCGTGGAGATGTGTAGACGAG 58.992 52.381 0.00 0.00 32.47 4.18
617 618 2.007608 CTCGTGGAGATGTGTAGACGA 58.992 52.381 0.00 0.00 34.85 4.20
618 619 1.738350 ACTCGTGGAGATGTGTAGACG 59.262 52.381 0.00 0.00 33.32 4.18
619 620 4.959596 TTACTCGTGGAGATGTGTAGAC 57.040 45.455 0.00 0.00 33.32 2.59
620 621 6.330278 CAATTTACTCGTGGAGATGTGTAGA 58.670 40.000 0.00 0.00 33.32 2.59
621 622 5.005779 GCAATTTACTCGTGGAGATGTGTAG 59.994 44.000 0.00 0.00 33.32 2.74
622 623 4.868171 GCAATTTACTCGTGGAGATGTGTA 59.132 41.667 0.00 0.00 33.32 2.90
623 624 3.684788 GCAATTTACTCGTGGAGATGTGT 59.315 43.478 0.00 0.00 33.32 3.72
624 625 3.684305 TGCAATTTACTCGTGGAGATGTG 59.316 43.478 0.00 0.00 33.32 3.21
625 626 3.684788 GTGCAATTTACTCGTGGAGATGT 59.315 43.478 0.00 0.00 33.32 3.06
626 627 3.684305 TGTGCAATTTACTCGTGGAGATG 59.316 43.478 0.00 0.00 33.32 2.90
627 628 3.935203 CTGTGCAATTTACTCGTGGAGAT 59.065 43.478 0.00 0.00 33.32 2.75
628 629 3.006430 TCTGTGCAATTTACTCGTGGAGA 59.994 43.478 0.00 0.00 33.32 3.71
629 630 3.325870 TCTGTGCAATTTACTCGTGGAG 58.674 45.455 0.00 0.00 35.52 3.86
630 631 3.394674 TCTGTGCAATTTACTCGTGGA 57.605 42.857 0.00 0.00 0.00 4.02
631 632 3.498397 ACTTCTGTGCAATTTACTCGTGG 59.502 43.478 0.00 0.00 0.00 4.94
760 762 6.455646 GGTCAGCTTTTCTGTCAATACGTATG 60.456 42.308 9.24 3.89 43.32 2.39
1135 1139 4.822026 AGACCACCTAGACAGAAAAATCG 58.178 43.478 0.00 0.00 0.00 3.34
1235 1239 3.009143 GGGTCCTAAAGAGAGAAAGGCAA 59.991 47.826 0.00 0.00 0.00 4.52
1250 1254 2.701951 GACCATTGTAATCCGGGTCCTA 59.298 50.000 0.00 0.00 41.67 2.94
1412 1416 8.489489 ACTATGTGACTTCCAATGAACATATCT 58.511 33.333 0.00 0.00 0.00 1.98
1803 2118 8.463930 TCTTATTTTCTTCTGTCAAATGGTGT 57.536 30.769 0.00 0.00 0.00 4.16
2111 2426 3.940221 CTCCAAATTCTCTTGAGCCTCAG 59.060 47.826 0.00 0.00 0.00 3.35
2250 2565 7.609532 AGCTCAGTAATCTTAAACTCTTGCATT 59.390 33.333 0.00 0.00 0.00 3.56
2349 2664 6.600388 TCTGCAATGCCCACTAATCTTAATA 58.400 36.000 1.53 0.00 0.00 0.98
2374 2689 1.428912 ACAGCCATCCTTCCCAAAAGA 59.571 47.619 0.00 0.00 0.00 2.52
2552 2867 8.500753 TGTTCACATTATAGGAATACACAACC 57.499 34.615 0.00 0.00 0.00 3.77
2555 2870 9.119418 CCATTGTTCACATTATAGGAATACACA 57.881 33.333 0.00 0.00 0.00 3.72
2556 2871 9.120538 ACCATTGTTCACATTATAGGAATACAC 57.879 33.333 0.00 0.00 0.00 2.90
2557 2872 9.693739 AACCATTGTTCACATTATAGGAATACA 57.306 29.630 0.00 0.00 0.00 2.29
2558 2873 9.950680 CAACCATTGTTCACATTATAGGAATAC 57.049 33.333 0.00 0.00 30.42 1.89
2559 2874 9.693739 ACAACCATTGTTCACATTATAGGAATA 57.306 29.630 0.00 0.00 42.22 1.75
2560 2875 8.469200 CACAACCATTGTTCACATTATAGGAAT 58.531 33.333 0.00 0.00 43.23 3.01
2561 2876 7.450014 ACACAACCATTGTTCACATTATAGGAA 59.550 33.333 0.00 0.00 43.23 3.36
2562 2877 6.945435 ACACAACCATTGTTCACATTATAGGA 59.055 34.615 0.00 0.00 43.23 2.94
2563 2878 7.156876 ACACAACCATTGTTCACATTATAGG 57.843 36.000 0.00 0.00 43.23 2.57
2566 2881 8.250332 GGAATACACAACCATTGTTCACATTAT 58.750 33.333 0.00 0.00 43.23 1.28
3016 4043 1.381872 GGAGCTGGGAGAGGTGCTA 60.382 63.158 0.00 0.00 37.53 3.49
3064 4151 0.041833 AACAGCTGGGAGAGGAGCTA 59.958 55.000 19.93 0.00 43.88 3.32
3218 4352 9.108111 TCCTCTTATAAGTGGTTTTCCTTCTTA 57.892 33.333 25.55 6.36 39.91 2.10


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.