Multiple sequence alignment - TraesCS4A01G371200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G371200 chr4A 100.000 3469 0 0 1 3469 644773416 644769948 0.000000e+00 6407
1 TraesCS4A01G371200 chr4A 96.866 734 21 2 1 732 644849393 644848660 0.000000e+00 1227
2 TraesCS4A01G371200 chr4A 95.777 734 27 4 1 732 645070593 645069862 0.000000e+00 1181
3 TraesCS4A01G371200 chr4A 84.699 366 42 5 1 358 644532213 644531854 1.530000e-93 353
4 TraesCS4A01G371200 chr4A 80.761 473 49 20 260 697 644686144 644685679 7.180000e-87 331
5 TraesCS4A01G371200 chr4A 80.761 473 49 20 260 697 644734578 644734113 7.180000e-87 331
6 TraesCS4A01G371200 chr4A 86.449 214 23 1 11 218 645127238 645127025 2.690000e-56 230
7 TraesCS4A01G371200 chr4A 85.514 214 25 1 11 218 645162424 645162211 5.830000e-53 219
8 TraesCS4A01G371200 chr4A 86.290 124 15 1 576 697 645105690 645105567 2.170000e-27 134
9 TraesCS4A01G371200 chr3A 99.235 2744 15 1 732 3469 23447067 23449810 0.000000e+00 4946
10 TraesCS4A01G371200 chr3A 98.539 2738 25 1 732 3469 57277797 57275075 0.000000e+00 4820
11 TraesCS4A01G371200 chr5A 99.233 2738 21 0 732 3469 69232548 69229811 0.000000e+00 4940
12 TraesCS4A01G371200 chr1A 98.874 2753 15 2 732 3469 521287689 521284938 0.000000e+00 4898
13 TraesCS4A01G371200 chr1A 98.693 2755 19 3 731 3469 500074431 500071678 0.000000e+00 4872
14 TraesCS4A01G371200 chr7B 98.685 2738 21 1 732 3469 122624256 122626978 0.000000e+00 4843
15 TraesCS4A01G371200 chr7B 98.654 2452 18 1 732 3183 476795152 476792716 0.000000e+00 4331
16 TraesCS4A01G371200 chr5B 98.503 2739 26 5 731 3469 339081372 339084095 0.000000e+00 4817
17 TraesCS4A01G371200 chr2B 98.503 2739 22 6 731 3469 165276628 165279347 0.000000e+00 4813
18 TraesCS4A01G371200 chr6B 97.891 2750 23 5 732 3469 536839746 536837020 0.000000e+00 4724
19 TraesCS4A01G371200 chr6A 99.289 2392 17 0 732 3123 97398564 97396173 0.000000e+00 4324
20 TraesCS4A01G371200 chr4B 97.604 2003 15 2 1485 3469 451450953 451448966 0.000000e+00 3402
21 TraesCS4A01G371200 chr7D 89.398 349 32 4 178 526 39419118 39418775 5.320000e-118 435
22 TraesCS4A01G371200 chr7D 89.398 349 32 4 178 526 39460736 39460393 5.320000e-118 435
23 TraesCS4A01G371200 chr7D 88.825 349 34 4 178 526 39385056 39384713 1.150000e-114 424
24 TraesCS4A01G371200 chr7D 88.530 279 19 6 258 528 39503049 39502776 3.340000e-85 326
25 TraesCS4A01G371200 chr7D 84.983 293 24 7 244 528 39462191 39461911 2.640000e-71 279
26 TraesCS4A01G371200 chr7D 84.642 293 25 7 244 528 39386494 39386214 1.230000e-69 274
27 TraesCS4A01G371200 chr7D 84.642 293 25 7 244 528 39420573 39420293 1.230000e-69 274


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G371200 chr4A 644769948 644773416 3468 True 6407.0 6407 100.0000 1 3469 1 chr4A.!!$R4 3468
1 TraesCS4A01G371200 chr4A 644848660 644849393 733 True 1227.0 1227 96.8660 1 732 1 chr4A.!!$R5 731
2 TraesCS4A01G371200 chr4A 645069862 645070593 731 True 1181.0 1181 95.7770 1 732 1 chr4A.!!$R6 731
3 TraesCS4A01G371200 chr3A 23447067 23449810 2743 False 4946.0 4946 99.2350 732 3469 1 chr3A.!!$F1 2737
4 TraesCS4A01G371200 chr3A 57275075 57277797 2722 True 4820.0 4820 98.5390 732 3469 1 chr3A.!!$R1 2737
5 TraesCS4A01G371200 chr5A 69229811 69232548 2737 True 4940.0 4940 99.2330 732 3469 1 chr5A.!!$R1 2737
6 TraesCS4A01G371200 chr1A 521284938 521287689 2751 True 4898.0 4898 98.8740 732 3469 1 chr1A.!!$R2 2737
7 TraesCS4A01G371200 chr1A 500071678 500074431 2753 True 4872.0 4872 98.6930 731 3469 1 chr1A.!!$R1 2738
8 TraesCS4A01G371200 chr7B 122624256 122626978 2722 False 4843.0 4843 98.6850 732 3469 1 chr7B.!!$F1 2737
9 TraesCS4A01G371200 chr7B 476792716 476795152 2436 True 4331.0 4331 98.6540 732 3183 1 chr7B.!!$R1 2451
10 TraesCS4A01G371200 chr5B 339081372 339084095 2723 False 4817.0 4817 98.5030 731 3469 1 chr5B.!!$F1 2738
11 TraesCS4A01G371200 chr2B 165276628 165279347 2719 False 4813.0 4813 98.5030 731 3469 1 chr2B.!!$F1 2738
12 TraesCS4A01G371200 chr6B 536837020 536839746 2726 True 4724.0 4724 97.8910 732 3469 1 chr6B.!!$R1 2737
13 TraesCS4A01G371200 chr6A 97396173 97398564 2391 True 4324.0 4324 99.2890 732 3123 1 chr6A.!!$R1 2391
14 TraesCS4A01G371200 chr4B 451448966 451450953 1987 True 3402.0 3402 97.6040 1485 3469 1 chr4B.!!$R1 1984
15 TraesCS4A01G371200 chr7D 39460393 39462191 1798 True 357.0 435 87.1905 178 528 2 chr7D.!!$R4 350
16 TraesCS4A01G371200 chr7D 39418775 39420573 1798 True 354.5 435 87.0200 178 528 2 chr7D.!!$R3 350
17 TraesCS4A01G371200 chr7D 39384713 39386494 1781 True 349.0 424 86.7335 178 528 2 chr7D.!!$R2 350

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
492 494 0.030504 CATGGTGCGCAAAGTTCACA 59.969 50.0 14.0 3.08 32.69 3.58 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2674 2836 8.037166 TCTACATAATCAGCATAACCATAGCAG 58.963 37.037 0.0 0.0 0.0 4.24 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
79 81 6.348478 TGGATAATCCAACCCCAATCTTAA 57.652 37.500 0.00 0.00 45.00 1.85
96 98 7.419057 CCAATCTTAATAGGACCTAGAAGCACA 60.419 40.741 16.33 5.29 0.00 4.57
103 105 2.290960 GGACCTAGAAGCACATTGGGTT 60.291 50.000 0.00 0.00 0.00 4.11
111 113 3.788227 AGCACATTGGGTTAGAAGTCA 57.212 42.857 0.00 0.00 0.00 3.41
119 121 4.098914 TGGGTTAGAAGTCATTGCAACT 57.901 40.909 0.00 0.00 0.00 3.16
120 122 3.820467 TGGGTTAGAAGTCATTGCAACTG 59.180 43.478 0.00 1.67 0.00 3.16
121 123 3.191371 GGGTTAGAAGTCATTGCAACTGG 59.809 47.826 0.00 0.00 0.00 4.00
122 124 3.191371 GGTTAGAAGTCATTGCAACTGGG 59.809 47.826 0.00 0.00 0.00 4.45
123 125 1.251251 AGAAGTCATTGCAACTGGGC 58.749 50.000 0.00 0.00 0.00 5.36
124 126 1.202976 AGAAGTCATTGCAACTGGGCT 60.203 47.619 0.00 0.00 34.04 5.19
125 127 2.040278 AGAAGTCATTGCAACTGGGCTA 59.960 45.455 0.00 0.00 34.04 3.93
126 128 2.814805 AGTCATTGCAACTGGGCTAT 57.185 45.000 0.00 0.00 34.04 2.97
127 129 2.648059 AGTCATTGCAACTGGGCTATC 58.352 47.619 0.00 0.00 34.04 2.08
128 130 1.331756 GTCATTGCAACTGGGCTATCG 59.668 52.381 0.00 0.00 34.04 2.92
129 131 1.209261 TCATTGCAACTGGGCTATCGA 59.791 47.619 0.00 0.00 34.04 3.59
130 132 1.331756 CATTGCAACTGGGCTATCGAC 59.668 52.381 0.00 0.00 34.04 4.20
131 133 0.392461 TTGCAACTGGGCTATCGACC 60.392 55.000 0.00 0.00 39.55 4.79
136 138 4.392220 TGGGCTATCGACCATGGT 57.608 55.556 19.89 19.89 45.79 3.55
137 139 1.829456 TGGGCTATCGACCATGGTG 59.171 57.895 25.52 14.83 45.79 4.17
138 140 1.598130 GGGCTATCGACCATGGTGC 60.598 63.158 25.52 18.88 38.64 5.01
139 141 1.598130 GGCTATCGACCATGGTGCC 60.598 63.158 25.52 24.09 0.00 5.01
140 142 1.146041 GCTATCGACCATGGTGCCA 59.854 57.895 25.52 5.71 0.00 4.92
141 143 0.882042 GCTATCGACCATGGTGCCAG 60.882 60.000 25.52 14.41 0.00 4.85
142 144 0.752658 CTATCGACCATGGTGCCAGA 59.247 55.000 25.52 16.06 0.00 3.86
143 145 1.138859 CTATCGACCATGGTGCCAGAA 59.861 52.381 25.52 1.43 0.00 3.02
144 146 0.392998 ATCGACCATGGTGCCAGAAC 60.393 55.000 25.52 4.57 0.00 3.01
145 147 1.302431 CGACCATGGTGCCAGAACA 60.302 57.895 25.52 0.00 0.00 3.18
146 148 1.300971 CGACCATGGTGCCAGAACAG 61.301 60.000 25.52 0.00 0.00 3.16
147 149 0.036732 GACCATGGTGCCAGAACAGA 59.963 55.000 25.52 0.00 0.00 3.41
148 150 0.700564 ACCATGGTGCCAGAACAGAT 59.299 50.000 18.99 0.00 0.00 2.90
149 151 1.915489 ACCATGGTGCCAGAACAGATA 59.085 47.619 18.99 0.00 0.00 1.98
150 152 2.511218 ACCATGGTGCCAGAACAGATAT 59.489 45.455 18.99 0.00 0.00 1.63
151 153 2.882761 CCATGGTGCCAGAACAGATATG 59.117 50.000 2.57 0.00 0.00 1.78
152 154 3.434024 CCATGGTGCCAGAACAGATATGA 60.434 47.826 2.57 0.00 0.00 2.15
153 155 4.395625 CATGGTGCCAGAACAGATATGAT 58.604 43.478 0.00 0.00 0.00 2.45
154 156 4.508551 TGGTGCCAGAACAGATATGATT 57.491 40.909 0.00 0.00 0.00 2.57
155 157 4.201657 TGGTGCCAGAACAGATATGATTG 58.798 43.478 0.00 0.00 0.00 2.67
156 158 4.080413 TGGTGCCAGAACAGATATGATTGA 60.080 41.667 0.00 0.00 0.00 2.57
157 159 4.883585 GGTGCCAGAACAGATATGATTGAA 59.116 41.667 0.00 0.00 0.00 2.69
158 160 5.533903 GGTGCCAGAACAGATATGATTGAAT 59.466 40.000 0.00 0.00 0.00 2.57
159 161 6.040166 GGTGCCAGAACAGATATGATTGAATT 59.960 38.462 0.00 0.00 0.00 2.17
160 162 7.229306 GGTGCCAGAACAGATATGATTGAATTA 59.771 37.037 0.00 0.00 0.00 1.40
161 163 8.288208 GTGCCAGAACAGATATGATTGAATTAG 58.712 37.037 0.00 0.00 0.00 1.73
162 164 7.040892 TGCCAGAACAGATATGATTGAATTAGC 60.041 37.037 0.00 0.00 0.00 3.09
163 165 7.516481 CCAGAACAGATATGATTGAATTAGCG 58.484 38.462 0.00 0.00 0.00 4.26
164 166 7.014115 CAGAACAGATATGATTGAATTAGCGC 58.986 38.462 0.00 0.00 0.00 5.92
165 167 6.707608 AGAACAGATATGATTGAATTAGCGCA 59.292 34.615 11.47 0.00 0.00 6.09
166 168 6.477669 ACAGATATGATTGAATTAGCGCAG 57.522 37.500 11.47 0.00 0.00 5.18
167 169 6.226052 ACAGATATGATTGAATTAGCGCAGA 58.774 36.000 11.47 0.00 0.00 4.26
168 170 6.707608 ACAGATATGATTGAATTAGCGCAGAA 59.292 34.615 11.47 3.12 0.00 3.02
169 171 7.095313 ACAGATATGATTGAATTAGCGCAGAAG 60.095 37.037 11.47 0.00 0.00 2.85
170 172 3.680642 TGATTGAATTAGCGCAGAAGC 57.319 42.857 11.47 0.55 37.42 3.86
171 173 3.009026 TGATTGAATTAGCGCAGAAGCA 58.991 40.909 11.47 3.32 42.27 3.91
172 174 3.439825 TGATTGAATTAGCGCAGAAGCAA 59.560 39.130 11.47 12.05 42.27 3.91
173 175 4.096833 TGATTGAATTAGCGCAGAAGCAAT 59.903 37.500 11.47 15.89 42.27 3.56
174 176 4.439305 TTGAATTAGCGCAGAAGCAATT 57.561 36.364 11.47 5.05 42.27 2.32
175 177 4.019919 TGAATTAGCGCAGAAGCAATTC 57.980 40.909 11.47 13.86 42.27 2.17
176 178 3.181497 TGAATTAGCGCAGAAGCAATTCC 60.181 43.478 11.47 1.51 40.13 3.01
177 179 1.819928 TTAGCGCAGAAGCAATTCCA 58.180 45.000 11.47 0.00 42.27 3.53
178 180 1.819928 TAGCGCAGAAGCAATTCCAA 58.180 45.000 11.47 0.00 42.27 3.53
179 181 1.180029 AGCGCAGAAGCAATTCCAAT 58.820 45.000 11.47 0.00 42.27 3.16
180 182 1.135199 AGCGCAGAAGCAATTCCAATG 60.135 47.619 11.47 0.00 42.27 2.82
181 183 1.403249 GCGCAGAAGCAATTCCAATGT 60.403 47.619 0.30 0.00 42.27 2.71
182 184 2.256174 CGCAGAAGCAATTCCAATGTG 58.744 47.619 0.00 0.00 42.27 3.21
183 185 2.095110 CGCAGAAGCAATTCCAATGTGA 60.095 45.455 0.00 0.00 42.27 3.58
184 186 3.508762 GCAGAAGCAATTCCAATGTGAG 58.491 45.455 0.00 0.00 41.58 3.51
185 187 3.508762 CAGAAGCAATTCCAATGTGAGC 58.491 45.455 0.00 0.00 0.00 4.26
186 188 2.494870 AGAAGCAATTCCAATGTGAGCC 59.505 45.455 0.00 0.00 0.00 4.70
187 189 2.226962 AGCAATTCCAATGTGAGCCT 57.773 45.000 0.00 0.00 0.00 4.58
188 190 1.822990 AGCAATTCCAATGTGAGCCTG 59.177 47.619 0.00 0.00 0.00 4.85
189 191 1.820519 GCAATTCCAATGTGAGCCTGA 59.179 47.619 0.00 0.00 0.00 3.86
190 192 2.231964 GCAATTCCAATGTGAGCCTGAA 59.768 45.455 0.00 0.00 0.00 3.02
191 193 3.118884 GCAATTCCAATGTGAGCCTGAAT 60.119 43.478 0.00 0.00 0.00 2.57
192 194 4.430007 CAATTCCAATGTGAGCCTGAATG 58.570 43.478 0.00 0.00 0.00 2.67
193 195 1.466856 TCCAATGTGAGCCTGAATGC 58.533 50.000 0.00 0.00 0.00 3.56
194 196 1.005097 TCCAATGTGAGCCTGAATGCT 59.995 47.619 0.00 0.00 46.37 3.79
195 197 2.239402 TCCAATGTGAGCCTGAATGCTA 59.761 45.455 0.00 0.00 42.95 3.49
196 198 3.117776 TCCAATGTGAGCCTGAATGCTAT 60.118 43.478 0.00 0.00 42.95 2.97
197 199 3.635373 CCAATGTGAGCCTGAATGCTATT 59.365 43.478 0.00 0.00 42.95 1.73
198 200 4.261489 CCAATGTGAGCCTGAATGCTATTC 60.261 45.833 0.00 0.00 42.95 1.75
199 201 3.632643 TGTGAGCCTGAATGCTATTCA 57.367 42.857 10.01 10.01 42.95 2.57
200 202 4.160642 TGTGAGCCTGAATGCTATTCAT 57.839 40.909 10.62 0.00 42.95 2.57
202 204 5.683681 TGTGAGCCTGAATGCTATTCATTA 58.316 37.500 10.62 0.00 44.95 1.90
203 205 6.121590 TGTGAGCCTGAATGCTATTCATTAA 58.878 36.000 10.62 0.00 44.95 1.40
204 206 6.261603 TGTGAGCCTGAATGCTATTCATTAAG 59.738 38.462 10.62 0.00 44.95 1.85
205 207 6.484643 GTGAGCCTGAATGCTATTCATTAAGA 59.515 38.462 10.62 0.00 43.55 2.10
206 208 7.012704 GTGAGCCTGAATGCTATTCATTAAGAA 59.987 37.037 10.62 0.00 43.55 2.52
207 209 7.228108 TGAGCCTGAATGCTATTCATTAAGAAG 59.772 37.037 10.62 0.96 43.55 2.85
208 210 6.489361 AGCCTGAATGCTATTCATTAAGAAGG 59.511 38.462 10.62 8.42 43.55 3.46
209 211 6.294397 GCCTGAATGCTATTCATTAAGAAGGG 60.294 42.308 10.62 7.91 43.55 3.95
210 212 6.208204 CCTGAATGCTATTCATTAAGAAGGGG 59.792 42.308 10.62 4.03 43.55 4.79
211 213 6.672593 TGAATGCTATTCATTAAGAAGGGGT 58.327 36.000 7.27 0.00 44.95 4.95
212 214 6.547141 TGAATGCTATTCATTAAGAAGGGGTG 59.453 38.462 7.27 0.00 44.95 4.61
213 215 4.207165 TGCTATTCATTAAGAAGGGGTGC 58.793 43.478 0.00 0.00 40.15 5.01
214 216 4.079787 TGCTATTCATTAAGAAGGGGTGCT 60.080 41.667 0.00 0.00 40.15 4.40
215 217 5.131977 TGCTATTCATTAAGAAGGGGTGCTA 59.868 40.000 0.00 0.00 40.15 3.49
216 218 6.183361 TGCTATTCATTAAGAAGGGGTGCTAT 60.183 38.462 0.00 0.00 40.15 2.97
217 219 7.017155 TGCTATTCATTAAGAAGGGGTGCTATA 59.983 37.037 0.00 0.00 40.15 1.31
218 220 8.049721 GCTATTCATTAAGAAGGGGTGCTATAT 58.950 37.037 0.00 0.00 40.15 0.86
219 221 9.965902 CTATTCATTAAGAAGGGGTGCTATATT 57.034 33.333 0.00 0.00 40.15 1.28
226 228 6.875972 AGAAGGGGTGCTATATTATACAGG 57.124 41.667 0.00 0.00 0.00 4.00
227 229 5.189934 AGAAGGGGTGCTATATTATACAGGC 59.810 44.000 0.00 0.00 0.00 4.85
228 230 3.451178 AGGGGTGCTATATTATACAGGCG 59.549 47.826 0.00 0.00 0.00 5.52
229 231 3.449737 GGGGTGCTATATTATACAGGCGA 59.550 47.826 0.00 0.00 0.00 5.54
230 232 4.101119 GGGGTGCTATATTATACAGGCGAT 59.899 45.833 0.00 0.00 0.00 4.58
231 233 5.396436 GGGGTGCTATATTATACAGGCGATT 60.396 44.000 0.00 0.00 0.00 3.34
232 234 5.523916 GGGTGCTATATTATACAGGCGATTG 59.476 44.000 0.00 0.00 0.00 2.67
233 235 6.106673 GGTGCTATATTATACAGGCGATTGT 58.893 40.000 0.00 0.00 35.09 2.71
234 236 6.255887 GGTGCTATATTATACAGGCGATTGTC 59.744 42.308 0.00 0.00 32.56 3.18
235 237 7.036220 GTGCTATATTATACAGGCGATTGTCT 58.964 38.462 0.00 0.00 32.56 3.41
236 238 7.221067 GTGCTATATTATACAGGCGATTGTCTC 59.779 40.741 0.00 0.00 32.56 3.36
244 246 4.732106 CGATTGTCTCGCCTACCC 57.268 61.111 0.00 0.00 41.14 3.69
245 247 2.116383 CGATTGTCTCGCCTACCCT 58.884 57.895 0.00 0.00 41.14 4.34
246 248 0.460311 CGATTGTCTCGCCTACCCTT 59.540 55.000 0.00 0.00 41.14 3.95
247 249 1.134788 CGATTGTCTCGCCTACCCTTT 60.135 52.381 0.00 0.00 41.14 3.11
248 250 2.280628 GATTGTCTCGCCTACCCTTTG 58.719 52.381 0.00 0.00 0.00 2.77
249 251 1.344065 TTGTCTCGCCTACCCTTTGA 58.656 50.000 0.00 0.00 0.00 2.69
250 252 1.344065 TGTCTCGCCTACCCTTTGAA 58.656 50.000 0.00 0.00 0.00 2.69
251 253 1.001633 TGTCTCGCCTACCCTTTGAAC 59.998 52.381 0.00 0.00 0.00 3.18
252 254 1.275573 GTCTCGCCTACCCTTTGAACT 59.724 52.381 0.00 0.00 0.00 3.01
253 255 2.494870 GTCTCGCCTACCCTTTGAACTA 59.505 50.000 0.00 0.00 0.00 2.24
254 256 3.056322 GTCTCGCCTACCCTTTGAACTAA 60.056 47.826 0.00 0.00 0.00 2.24
255 257 3.579586 TCTCGCCTACCCTTTGAACTAAA 59.420 43.478 0.00 0.00 0.00 1.85
256 258 4.224370 TCTCGCCTACCCTTTGAACTAAAT 59.776 41.667 0.00 0.00 0.00 1.40
257 259 4.913784 TCGCCTACCCTTTGAACTAAATT 58.086 39.130 0.00 0.00 0.00 1.82
258 260 4.698304 TCGCCTACCCTTTGAACTAAATTG 59.302 41.667 0.00 0.00 0.00 2.32
259 261 4.142469 CGCCTACCCTTTGAACTAAATTGG 60.142 45.833 0.00 0.00 0.00 3.16
260 262 4.770531 GCCTACCCTTTGAACTAAATTGGT 59.229 41.667 0.00 0.00 37.21 3.67
261 263 5.105877 GCCTACCCTTTGAACTAAATTGGTC 60.106 44.000 0.00 0.00 35.83 4.02
262 264 5.417894 CCTACCCTTTGAACTAAATTGGTCC 59.582 44.000 0.00 0.00 35.83 4.46
263 265 4.810345 ACCCTTTGAACTAAATTGGTCCA 58.190 39.130 0.00 0.00 31.34 4.02
264 266 5.212745 ACCCTTTGAACTAAATTGGTCCAA 58.787 37.500 6.80 6.80 31.34 3.53
265 267 5.663556 ACCCTTTGAACTAAATTGGTCCAAA 59.336 36.000 8.75 0.00 31.34 3.28
266 268 6.157123 ACCCTTTGAACTAAATTGGTCCAAAA 59.843 34.615 8.75 0.00 31.34 2.44
267 269 6.481976 CCCTTTGAACTAAATTGGTCCAAAAC 59.518 38.462 8.75 0.00 0.00 2.43
268 270 7.044798 CCTTTGAACTAAATTGGTCCAAAACA 58.955 34.615 8.75 0.00 0.00 2.83
269 271 7.714813 CCTTTGAACTAAATTGGTCCAAAACAT 59.285 33.333 8.75 0.00 0.00 2.71
270 272 8.655651 TTTGAACTAAATTGGTCCAAAACATC 57.344 30.769 8.75 3.81 0.00 3.06
271 273 6.754193 TGAACTAAATTGGTCCAAAACATCC 58.246 36.000 8.75 0.00 0.00 3.51
272 274 6.325028 TGAACTAAATTGGTCCAAAACATCCA 59.675 34.615 8.75 0.00 0.00 3.41
273 275 6.933514 ACTAAATTGGTCCAAAACATCCAT 57.066 33.333 8.75 0.00 0.00 3.41
274 276 7.315066 ACTAAATTGGTCCAAAACATCCATT 57.685 32.000 8.75 0.00 0.00 3.16
275 277 7.160726 ACTAAATTGGTCCAAAACATCCATTG 58.839 34.615 8.75 0.00 0.00 2.82
276 278 5.565455 AATTGGTCCAAAACATCCATTGT 57.435 34.783 8.75 0.00 41.53 2.71
277 279 6.678568 AATTGGTCCAAAACATCCATTGTA 57.321 33.333 8.75 0.00 37.68 2.41
278 280 6.872585 ATTGGTCCAAAACATCCATTGTAT 57.127 33.333 8.75 0.00 37.68 2.29
279 281 6.678568 TTGGTCCAAAACATCCATTGTATT 57.321 33.333 0.40 0.00 37.68 1.89
280 282 6.035368 TGGTCCAAAACATCCATTGTATTG 57.965 37.500 0.00 0.00 37.68 1.90
281 283 5.777223 TGGTCCAAAACATCCATTGTATTGA 59.223 36.000 0.00 0.00 37.68 2.57
282 284 6.268617 TGGTCCAAAACATCCATTGTATTGAA 59.731 34.615 0.00 0.00 37.68 2.69
283 285 7.158021 GGTCCAAAACATCCATTGTATTGAAA 58.842 34.615 0.00 0.00 37.68 2.69
284 286 7.823799 GGTCCAAAACATCCATTGTATTGAAAT 59.176 33.333 0.00 0.00 37.68 2.17
285 287 9.218440 GTCCAAAACATCCATTGTATTGAAATT 57.782 29.630 0.00 0.00 37.68 1.82
286 288 9.434420 TCCAAAACATCCATTGTATTGAAATTC 57.566 29.630 0.00 0.00 37.68 2.17
287 289 9.439500 CCAAAACATCCATTGTATTGAAATTCT 57.561 29.630 0.00 0.00 37.68 2.40
305 307 9.295825 TGAAATTCTTTTCAACTTATAGAGGCA 57.704 29.630 0.00 0.00 46.26 4.75
309 311 9.914131 ATTCTTTTCAACTTATAGAGGCAAAAC 57.086 29.630 0.00 0.00 0.00 2.43
310 312 7.882179 TCTTTTCAACTTATAGAGGCAAAACC 58.118 34.615 0.00 0.00 39.61 3.27
311 313 6.584185 TTTCAACTTATAGAGGCAAAACCC 57.416 37.500 0.00 0.00 40.58 4.11
312 314 5.249780 TCAACTTATAGAGGCAAAACCCA 57.750 39.130 0.00 0.00 40.58 4.51
313 315 5.636123 TCAACTTATAGAGGCAAAACCCAA 58.364 37.500 0.00 0.00 40.58 4.12
314 316 6.071984 TCAACTTATAGAGGCAAAACCCAAA 58.928 36.000 0.00 0.00 40.58 3.28
315 317 6.208599 TCAACTTATAGAGGCAAAACCCAAAG 59.791 38.462 0.00 0.00 40.58 2.77
316 318 5.016831 ACTTATAGAGGCAAAACCCAAAGG 58.983 41.667 0.00 0.00 40.58 3.11
317 319 3.825908 ATAGAGGCAAAACCCAAAGGA 57.174 42.857 0.00 0.00 40.58 3.36
318 320 2.702270 AGAGGCAAAACCCAAAGGAT 57.298 45.000 0.00 0.00 40.58 3.24
319 321 2.976440 AGAGGCAAAACCCAAAGGATT 58.024 42.857 0.00 0.00 40.58 3.01
320 322 2.899900 AGAGGCAAAACCCAAAGGATTC 59.100 45.455 0.00 0.00 40.58 2.52
321 323 2.632512 GAGGCAAAACCCAAAGGATTCA 59.367 45.455 0.00 0.00 40.58 2.57
322 324 3.250617 AGGCAAAACCCAAAGGATTCAT 58.749 40.909 0.00 0.00 40.58 2.57
323 325 3.008266 AGGCAAAACCCAAAGGATTCATG 59.992 43.478 0.00 0.00 40.58 3.07
324 326 3.244526 GGCAAAACCCAAAGGATTCATGT 60.245 43.478 0.00 0.00 36.73 3.21
325 327 3.996363 GCAAAACCCAAAGGATTCATGTC 59.004 43.478 0.00 0.00 36.73 3.06
326 328 4.502950 GCAAAACCCAAAGGATTCATGTCA 60.503 41.667 0.00 0.00 36.73 3.58
327 329 5.609423 CAAAACCCAAAGGATTCATGTCAA 58.391 37.500 0.00 0.00 36.73 3.18
328 330 5.473066 AAACCCAAAGGATTCATGTCAAG 57.527 39.130 0.00 0.00 36.73 3.02
329 331 4.118168 ACCCAAAGGATTCATGTCAAGT 57.882 40.909 0.00 0.00 36.73 3.16
330 332 4.082125 ACCCAAAGGATTCATGTCAAGTC 58.918 43.478 0.00 0.00 36.73 3.01
331 333 4.202609 ACCCAAAGGATTCATGTCAAGTCT 60.203 41.667 0.00 0.00 36.73 3.24
332 334 4.768968 CCCAAAGGATTCATGTCAAGTCTT 59.231 41.667 0.00 0.00 33.47 3.01
333 335 5.244626 CCCAAAGGATTCATGTCAAGTCTTT 59.755 40.000 0.00 0.00 33.47 2.52
334 336 6.385033 CCAAAGGATTCATGTCAAGTCTTTC 58.615 40.000 0.00 0.00 0.00 2.62
335 337 6.016024 CCAAAGGATTCATGTCAAGTCTTTCA 60.016 38.462 0.00 0.00 0.00 2.69
336 338 6.814506 AAGGATTCATGTCAAGTCTTTCAG 57.185 37.500 0.00 0.00 0.00 3.02
337 339 5.251764 AGGATTCATGTCAAGTCTTTCAGG 58.748 41.667 0.00 0.00 0.00 3.86
338 340 5.013495 AGGATTCATGTCAAGTCTTTCAGGA 59.987 40.000 0.00 0.00 0.00 3.86
339 341 5.707298 GGATTCATGTCAAGTCTTTCAGGAA 59.293 40.000 13.34 13.34 35.65 3.36
340 342 6.128063 GGATTCATGTCAAGTCTTTCAGGAAG 60.128 42.308 15.11 0.00 34.91 3.46
341 343 4.645535 TCATGTCAAGTCTTTCAGGAAGG 58.354 43.478 0.00 0.00 35.98 3.46
342 344 4.103153 TCATGTCAAGTCTTTCAGGAAGGT 59.897 41.667 0.00 0.00 35.98 3.50
343 345 3.808728 TGTCAAGTCTTTCAGGAAGGTG 58.191 45.455 0.00 0.00 35.98 4.00
344 346 2.550180 GTCAAGTCTTTCAGGAAGGTGC 59.450 50.000 0.00 0.00 35.98 5.01
345 347 2.439507 TCAAGTCTTTCAGGAAGGTGCT 59.560 45.455 0.00 0.00 35.98 4.40
346 348 2.551459 CAAGTCTTTCAGGAAGGTGCTG 59.449 50.000 0.00 0.00 37.15 4.41
347 349 1.771255 AGTCTTTCAGGAAGGTGCTGT 59.229 47.619 0.00 0.00 37.12 4.40
348 350 2.173569 AGTCTTTCAGGAAGGTGCTGTT 59.826 45.455 0.00 0.00 37.12 3.16
349 351 3.391296 AGTCTTTCAGGAAGGTGCTGTTA 59.609 43.478 0.00 0.00 37.12 2.41
350 352 3.748568 GTCTTTCAGGAAGGTGCTGTTAG 59.251 47.826 0.00 0.00 37.12 2.34
351 353 3.391296 TCTTTCAGGAAGGTGCTGTTAGT 59.609 43.478 0.00 0.00 37.12 2.24
352 354 4.591498 TCTTTCAGGAAGGTGCTGTTAGTA 59.409 41.667 0.00 0.00 37.12 1.82
353 355 4.537135 TTCAGGAAGGTGCTGTTAGTAG 57.463 45.455 0.00 0.00 37.12 2.57
354 356 2.832129 TCAGGAAGGTGCTGTTAGTAGG 59.168 50.000 0.00 0.00 37.12 3.18
355 357 2.832129 CAGGAAGGTGCTGTTAGTAGGA 59.168 50.000 0.00 0.00 30.66 2.94
356 358 3.100671 AGGAAGGTGCTGTTAGTAGGAG 58.899 50.000 0.00 0.00 0.00 3.69
357 359 3.097614 GGAAGGTGCTGTTAGTAGGAGA 58.902 50.000 0.00 0.00 0.00 3.71
358 360 3.131400 GGAAGGTGCTGTTAGTAGGAGAG 59.869 52.174 0.00 0.00 0.00 3.20
359 361 3.459710 AGGTGCTGTTAGTAGGAGAGT 57.540 47.619 0.00 0.00 0.00 3.24
360 362 3.093057 AGGTGCTGTTAGTAGGAGAGTG 58.907 50.000 0.00 0.00 0.00 3.51
361 363 2.166664 GGTGCTGTTAGTAGGAGAGTGG 59.833 54.545 0.00 0.00 0.00 4.00
362 364 2.826725 GTGCTGTTAGTAGGAGAGTGGT 59.173 50.000 0.00 0.00 0.00 4.16
363 365 3.258622 GTGCTGTTAGTAGGAGAGTGGTT 59.741 47.826 0.00 0.00 0.00 3.67
364 366 3.258372 TGCTGTTAGTAGGAGAGTGGTTG 59.742 47.826 0.00 0.00 0.00 3.77
365 367 3.258622 GCTGTTAGTAGGAGAGTGGTTGT 59.741 47.826 0.00 0.00 0.00 3.32
366 368 4.262506 GCTGTTAGTAGGAGAGTGGTTGTT 60.263 45.833 0.00 0.00 0.00 2.83
367 369 5.464030 TGTTAGTAGGAGAGTGGTTGTTC 57.536 43.478 0.00 0.00 0.00 3.18
368 370 4.897076 TGTTAGTAGGAGAGTGGTTGTTCA 59.103 41.667 0.00 0.00 0.00 3.18
369 371 5.542635 TGTTAGTAGGAGAGTGGTTGTTCAT 59.457 40.000 0.00 0.00 0.00 2.57
370 372 6.722590 TGTTAGTAGGAGAGTGGTTGTTCATA 59.277 38.462 0.00 0.00 0.00 2.15
371 373 5.923733 AGTAGGAGAGTGGTTGTTCATAG 57.076 43.478 0.00 0.00 0.00 2.23
372 374 5.580998 AGTAGGAGAGTGGTTGTTCATAGA 58.419 41.667 0.00 0.00 0.00 1.98
373 375 5.654650 AGTAGGAGAGTGGTTGTTCATAGAG 59.345 44.000 0.00 0.00 0.00 2.43
374 376 4.421131 AGGAGAGTGGTTGTTCATAGAGT 58.579 43.478 0.00 0.00 0.00 3.24
375 377 4.841246 AGGAGAGTGGTTGTTCATAGAGTT 59.159 41.667 0.00 0.00 0.00 3.01
376 378 5.308237 AGGAGAGTGGTTGTTCATAGAGTTT 59.692 40.000 0.00 0.00 0.00 2.66
377 379 6.497259 AGGAGAGTGGTTGTTCATAGAGTTTA 59.503 38.462 0.00 0.00 0.00 2.01
378 380 7.016268 AGGAGAGTGGTTGTTCATAGAGTTTAA 59.984 37.037 0.00 0.00 0.00 1.52
379 381 7.332182 GGAGAGTGGTTGTTCATAGAGTTTAAG 59.668 40.741 0.00 0.00 0.00 1.85
380 382 7.963532 AGAGTGGTTGTTCATAGAGTTTAAGA 58.036 34.615 0.00 0.00 0.00 2.10
381 383 8.429641 AGAGTGGTTGTTCATAGAGTTTAAGAA 58.570 33.333 0.00 0.00 0.00 2.52
382 384 8.974060 AGTGGTTGTTCATAGAGTTTAAGAAA 57.026 30.769 0.00 0.00 0.00 2.52
383 385 9.057089 AGTGGTTGTTCATAGAGTTTAAGAAAG 57.943 33.333 0.00 0.00 0.00 2.62
384 386 9.052759 GTGGTTGTTCATAGAGTTTAAGAAAGA 57.947 33.333 0.00 0.00 0.00 2.52
385 387 9.793259 TGGTTGTTCATAGAGTTTAAGAAAGAT 57.207 29.630 0.00 0.00 0.00 2.40
389 391 9.582431 TGTTCATAGAGTTTAAGAAAGATACCG 57.418 33.333 0.00 0.00 0.00 4.02
390 392 9.583765 GTTCATAGAGTTTAAGAAAGATACCGT 57.416 33.333 0.00 0.00 0.00 4.83
391 393 9.582431 TTCATAGAGTTTAAGAAAGATACCGTG 57.418 33.333 0.00 0.00 0.00 4.94
392 394 8.746530 TCATAGAGTTTAAGAAAGATACCGTGT 58.253 33.333 0.00 0.00 0.00 4.49
393 395 9.367444 CATAGAGTTTAAGAAAGATACCGTGTT 57.633 33.333 0.00 0.00 0.00 3.32
394 396 7.886405 AGAGTTTAAGAAAGATACCGTGTTC 57.114 36.000 0.00 0.00 0.00 3.18
395 397 7.668492 AGAGTTTAAGAAAGATACCGTGTTCT 58.332 34.615 0.00 0.00 31.69 3.01
396 398 8.800332 AGAGTTTAAGAAAGATACCGTGTTCTA 58.200 33.333 0.00 0.00 30.24 2.10
397 399 9.583765 GAGTTTAAGAAAGATACCGTGTTCTAT 57.416 33.333 0.00 0.00 30.24 1.98
403 405 9.698309 AAGAAAGATACCGTGTTCTATATGATG 57.302 33.333 0.00 0.00 30.24 3.07
404 406 8.861086 AGAAAGATACCGTGTTCTATATGATGT 58.139 33.333 0.00 0.00 0.00 3.06
408 410 9.462606 AGATACCGTGTTCTATATGATGTATCA 57.537 33.333 0.00 0.00 41.70 2.15
409 411 9.723447 GATACCGTGTTCTATATGATGTATCAG 57.277 37.037 0.74 0.00 40.64 2.90
410 412 7.526142 ACCGTGTTCTATATGATGTATCAGT 57.474 36.000 0.74 0.00 40.64 3.41
411 413 7.952671 ACCGTGTTCTATATGATGTATCAGTT 58.047 34.615 0.74 0.00 40.64 3.16
412 414 7.867909 ACCGTGTTCTATATGATGTATCAGTTG 59.132 37.037 0.74 0.00 40.64 3.16
413 415 7.148738 CCGTGTTCTATATGATGTATCAGTTGC 60.149 40.741 0.74 0.00 40.64 4.17
414 416 7.596621 CGTGTTCTATATGATGTATCAGTTGCT 59.403 37.037 0.74 0.00 40.64 3.91
415 417 8.706936 GTGTTCTATATGATGTATCAGTTGCTG 58.293 37.037 0.74 0.00 40.64 4.41
416 418 7.874528 TGTTCTATATGATGTATCAGTTGCTGG 59.125 37.037 0.74 0.00 40.64 4.85
417 419 6.939622 TCTATATGATGTATCAGTTGCTGGG 58.060 40.000 0.74 0.00 40.64 4.45
418 420 3.939740 ATGATGTATCAGTTGCTGGGT 57.060 42.857 0.74 0.00 40.64 4.51
419 421 3.266510 TGATGTATCAGTTGCTGGGTC 57.733 47.619 0.00 0.00 32.11 4.46
420 422 2.840038 TGATGTATCAGTTGCTGGGTCT 59.160 45.455 0.00 0.00 32.11 3.85
421 423 4.030216 TGATGTATCAGTTGCTGGGTCTA 58.970 43.478 0.00 0.00 32.11 2.59
422 424 4.469586 TGATGTATCAGTTGCTGGGTCTAA 59.530 41.667 0.00 0.00 32.11 2.10
423 425 5.130975 TGATGTATCAGTTGCTGGGTCTAAT 59.869 40.000 0.00 0.00 32.11 1.73
424 426 5.435686 TGTATCAGTTGCTGGGTCTAATT 57.564 39.130 0.00 0.00 31.51 1.40
425 427 5.815581 TGTATCAGTTGCTGGGTCTAATTT 58.184 37.500 0.00 0.00 31.51 1.82
426 428 6.245408 TGTATCAGTTGCTGGGTCTAATTTT 58.755 36.000 0.00 0.00 31.51 1.82
427 429 6.719370 TGTATCAGTTGCTGGGTCTAATTTTT 59.281 34.615 0.00 0.00 31.51 1.94
460 462 9.823647 ACTACCTTCACTTCTATATGTGATTTG 57.176 33.333 0.00 0.00 41.93 2.32
461 463 9.823647 CTACCTTCACTTCTATATGTGATTTGT 57.176 33.333 0.00 0.00 41.93 2.83
462 464 8.723942 ACCTTCACTTCTATATGTGATTTGTC 57.276 34.615 0.00 0.00 41.93 3.18
463 465 8.321353 ACCTTCACTTCTATATGTGATTTGTCA 58.679 33.333 0.00 0.00 41.93 3.58
464 466 9.166173 CCTTCACTTCTATATGTGATTTGTCAA 57.834 33.333 0.00 0.00 41.93 3.18
466 468 9.942850 TTCACTTCTATATGTGATTTGTCAAGA 57.057 29.630 0.00 0.00 41.93 3.02
467 469 9.942850 TCACTTCTATATGTGATTTGTCAAGAA 57.057 29.630 0.00 0.00 38.15 2.52
477 479 9.811995 ATGTGATTTGTCAAGAATAAATCATGG 57.188 29.630 18.47 0.00 46.36 3.66
478 480 8.805175 TGTGATTTGTCAAGAATAAATCATGGT 58.195 29.630 18.47 0.00 46.36 3.55
479 481 9.079833 GTGATTTGTCAAGAATAAATCATGGTG 57.920 33.333 18.47 0.00 46.36 4.17
480 482 7.760794 TGATTTGTCAAGAATAAATCATGGTGC 59.239 33.333 14.56 0.00 42.57 5.01
481 483 5.233957 TGTCAAGAATAAATCATGGTGCG 57.766 39.130 0.00 0.00 0.00 5.34
482 484 4.037690 GTCAAGAATAAATCATGGTGCGC 58.962 43.478 0.00 0.00 0.00 6.09
483 485 3.693578 TCAAGAATAAATCATGGTGCGCA 59.306 39.130 5.66 5.66 0.00 6.09
484 486 4.157472 TCAAGAATAAATCATGGTGCGCAA 59.843 37.500 14.00 0.00 0.00 4.85
485 487 4.717233 AGAATAAATCATGGTGCGCAAA 57.283 36.364 14.00 3.42 0.00 3.68
486 488 4.675510 AGAATAAATCATGGTGCGCAAAG 58.324 39.130 14.00 1.90 0.00 2.77
487 489 4.158394 AGAATAAATCATGGTGCGCAAAGT 59.842 37.500 14.00 0.00 0.00 2.66
488 490 2.818130 AAATCATGGTGCGCAAAGTT 57.182 40.000 14.00 0.00 0.00 2.66
489 491 2.352503 AATCATGGTGCGCAAAGTTC 57.647 45.000 14.00 0.00 0.00 3.01
490 492 1.246649 ATCATGGTGCGCAAAGTTCA 58.753 45.000 14.00 6.38 0.00 3.18
491 493 0.310543 TCATGGTGCGCAAAGTTCAC 59.689 50.000 14.00 0.00 0.00 3.18
492 494 0.030504 CATGGTGCGCAAAGTTCACA 59.969 50.000 14.00 3.08 32.69 3.58
493 495 0.030638 ATGGTGCGCAAAGTTCACAC 59.969 50.000 14.00 0.00 32.69 3.82
494 496 1.029408 TGGTGCGCAAAGTTCACACT 61.029 50.000 14.00 0.00 32.69 3.55
495 497 0.317020 GGTGCGCAAAGTTCACACTC 60.317 55.000 14.00 0.00 30.45 3.51
496 498 0.376852 GTGCGCAAAGTTCACACTCA 59.623 50.000 14.00 0.00 30.45 3.41
497 499 1.002468 GTGCGCAAAGTTCACACTCAT 60.002 47.619 14.00 0.00 30.45 2.90
498 500 2.223144 GTGCGCAAAGTTCACACTCATA 59.777 45.455 14.00 0.00 30.45 2.15
499 501 3.073678 TGCGCAAAGTTCACACTCATAT 58.926 40.909 8.16 0.00 30.45 1.78
500 502 3.501828 TGCGCAAAGTTCACACTCATATT 59.498 39.130 8.16 0.00 30.45 1.28
501 503 4.693095 TGCGCAAAGTTCACACTCATATTA 59.307 37.500 8.16 0.00 30.45 0.98
502 504 5.163864 TGCGCAAAGTTCACACTCATATTAG 60.164 40.000 8.16 0.00 30.45 1.73
503 505 5.163854 GCGCAAAGTTCACACTCATATTAGT 60.164 40.000 0.30 0.00 30.45 2.24
504 506 6.620733 GCGCAAAGTTCACACTCATATTAGTT 60.621 38.462 0.30 0.00 30.45 2.24
505 507 7.412563 GCGCAAAGTTCACACTCATATTAGTTA 60.413 37.037 0.30 0.00 30.45 2.24
506 508 7.898309 CGCAAAGTTCACACTCATATTAGTTAC 59.102 37.037 0.00 0.00 30.45 2.50
507 509 8.175716 GCAAAGTTCACACTCATATTAGTTACC 58.824 37.037 0.00 0.00 30.45 2.85
508 510 8.665685 CAAAGTTCACACTCATATTAGTTACCC 58.334 37.037 0.00 0.00 30.45 3.69
509 511 7.735326 AGTTCACACTCATATTAGTTACCCT 57.265 36.000 0.00 0.00 0.00 4.34
510 512 8.834004 AGTTCACACTCATATTAGTTACCCTA 57.166 34.615 0.00 0.00 0.00 3.53
511 513 9.435570 AGTTCACACTCATATTAGTTACCCTAT 57.564 33.333 0.00 0.00 0.00 2.57
523 525 8.959705 ATTAGTTACCCTATTTACAGCTTGTC 57.040 34.615 0.00 0.00 0.00 3.18
524 526 6.368779 AGTTACCCTATTTACAGCTTGTCA 57.631 37.500 0.00 0.00 0.00 3.58
525 527 6.171213 AGTTACCCTATTTACAGCTTGTCAC 58.829 40.000 0.00 0.00 0.00 3.67
526 528 4.910458 ACCCTATTTACAGCTTGTCACT 57.090 40.909 0.00 0.00 0.00 3.41
527 529 5.242795 ACCCTATTTACAGCTTGTCACTT 57.757 39.130 0.00 0.00 0.00 3.16
528 530 5.631119 ACCCTATTTACAGCTTGTCACTTT 58.369 37.500 0.00 0.00 0.00 2.66
529 531 6.068670 ACCCTATTTACAGCTTGTCACTTTT 58.931 36.000 0.00 0.00 0.00 2.27
530 532 6.549736 ACCCTATTTACAGCTTGTCACTTTTT 59.450 34.615 0.00 0.00 0.00 1.94
557 559 9.844790 TTAATAGTGAAAACAGATGCTTCAATG 57.155 29.630 2.07 0.00 30.73 2.82
558 560 5.779529 AGTGAAAACAGATGCTTCAATGT 57.220 34.783 2.07 0.00 31.21 2.71
559 561 5.766222 AGTGAAAACAGATGCTTCAATGTC 58.234 37.500 2.07 0.00 31.21 3.06
560 562 5.533903 AGTGAAAACAGATGCTTCAATGTCT 59.466 36.000 2.07 0.00 31.21 3.41
561 563 6.040166 AGTGAAAACAGATGCTTCAATGTCTT 59.960 34.615 2.07 0.00 31.21 3.01
562 564 7.229306 AGTGAAAACAGATGCTTCAATGTCTTA 59.771 33.333 2.07 0.00 31.21 2.10
563 565 8.025445 GTGAAAACAGATGCTTCAATGTCTTAT 58.975 33.333 2.07 0.00 31.21 1.73
564 566 8.239314 TGAAAACAGATGCTTCAATGTCTTATC 58.761 33.333 2.07 0.00 0.00 1.75
565 567 7.692460 AAACAGATGCTTCAATGTCTTATCA 57.308 32.000 2.07 0.00 0.00 2.15
566 568 7.876936 AACAGATGCTTCAATGTCTTATCAT 57.123 32.000 2.07 0.00 0.00 2.45
567 569 7.493743 ACAGATGCTTCAATGTCTTATCATC 57.506 36.000 2.07 0.00 0.00 2.92
568 570 7.281098 ACAGATGCTTCAATGTCTTATCATCT 58.719 34.615 2.07 0.00 39.71 2.90
569 571 8.427276 ACAGATGCTTCAATGTCTTATCATCTA 58.573 33.333 2.07 0.00 37.79 1.98
570 572 9.438228 CAGATGCTTCAATGTCTTATCATCTAT 57.562 33.333 2.07 0.00 37.79 1.98
571 573 9.438228 AGATGCTTCAATGTCTTATCATCTATG 57.562 33.333 2.07 0.00 38.01 2.23
572 574 9.433153 GATGCTTCAATGTCTTATCATCTATGA 57.567 33.333 0.00 0.00 41.70 2.15
594 596 7.312657 TGATATTCTTGTGAGAAAGTCATGC 57.687 36.000 0.00 0.00 44.61 4.06
595 597 6.880529 TGATATTCTTGTGAGAAAGTCATGCA 59.119 34.615 0.00 0.00 44.61 3.96
596 598 5.624344 ATTCTTGTGAGAAAGTCATGCAG 57.376 39.130 0.00 0.00 44.61 4.41
597 599 4.341366 TCTTGTGAGAAAGTCATGCAGA 57.659 40.909 0.00 0.00 37.56 4.26
598 600 4.707105 TCTTGTGAGAAAGTCATGCAGAA 58.293 39.130 0.00 0.00 37.56 3.02
599 601 5.125356 TCTTGTGAGAAAGTCATGCAGAAA 58.875 37.500 0.00 0.00 37.56 2.52
600 602 5.237996 TCTTGTGAGAAAGTCATGCAGAAAG 59.762 40.000 0.00 0.00 37.56 2.62
601 603 4.454678 TGTGAGAAAGTCATGCAGAAAGT 58.545 39.130 0.00 0.00 37.56 2.66
602 604 4.512944 TGTGAGAAAGTCATGCAGAAAGTC 59.487 41.667 0.00 0.00 37.56 3.01
603 605 3.742882 TGAGAAAGTCATGCAGAAAGTCG 59.257 43.478 0.00 0.00 0.00 4.18
604 606 2.481952 AGAAAGTCATGCAGAAAGTCGC 59.518 45.455 0.00 0.00 0.00 5.19
605 607 0.792640 AAGTCATGCAGAAAGTCGCG 59.207 50.000 0.00 0.00 0.00 5.87
606 608 0.319900 AGTCATGCAGAAAGTCGCGT 60.320 50.000 5.77 0.00 0.00 6.01
607 609 0.512952 GTCATGCAGAAAGTCGCGTT 59.487 50.000 5.77 0.00 0.00 4.84
608 610 0.790207 TCATGCAGAAAGTCGCGTTC 59.210 50.000 5.77 2.38 0.00 3.95
609 611 0.512518 CATGCAGAAAGTCGCGTTCA 59.487 50.000 5.77 0.00 0.00 3.18
610 612 0.792640 ATGCAGAAAGTCGCGTTCAG 59.207 50.000 5.77 0.56 0.00 3.02
611 613 0.249280 TGCAGAAAGTCGCGTTCAGA 60.249 50.000 5.77 0.00 0.00 3.27
612 614 0.436531 GCAGAAAGTCGCGTTCAGAG 59.563 55.000 5.77 0.00 0.00 3.35
613 615 1.930817 GCAGAAAGTCGCGTTCAGAGA 60.931 52.381 5.77 0.00 0.00 3.10
614 616 2.600731 CAGAAAGTCGCGTTCAGAGAT 58.399 47.619 5.77 0.00 0.00 2.75
615 617 3.759418 CAGAAAGTCGCGTTCAGAGATA 58.241 45.455 5.77 0.00 0.00 1.98
616 618 4.166523 CAGAAAGTCGCGTTCAGAGATAA 58.833 43.478 5.77 0.00 0.00 1.75
617 619 4.264145 CAGAAAGTCGCGTTCAGAGATAAG 59.736 45.833 5.77 0.00 0.00 1.73
618 620 3.851976 AAGTCGCGTTCAGAGATAAGT 57.148 42.857 5.77 0.00 0.00 2.24
619 621 3.851976 AGTCGCGTTCAGAGATAAGTT 57.148 42.857 5.77 0.00 0.00 2.66
620 622 4.959596 AGTCGCGTTCAGAGATAAGTTA 57.040 40.909 5.77 0.00 0.00 2.24
621 623 5.306532 AGTCGCGTTCAGAGATAAGTTAA 57.693 39.130 5.77 0.00 0.00 2.01
622 624 5.892568 AGTCGCGTTCAGAGATAAGTTAAT 58.107 37.500 5.77 0.00 0.00 1.40
623 625 5.972382 AGTCGCGTTCAGAGATAAGTTAATC 59.028 40.000 5.77 0.00 0.00 1.75
624 626 4.968181 TCGCGTTCAGAGATAAGTTAATCG 59.032 41.667 5.77 0.00 0.00 3.34
625 627 4.733887 CGCGTTCAGAGATAAGTTAATCGT 59.266 41.667 0.00 0.00 0.00 3.73
626 628 5.905733 CGCGTTCAGAGATAAGTTAATCGTA 59.094 40.000 0.00 0.00 0.00 3.43
627 629 6.577800 CGCGTTCAGAGATAAGTTAATCGTAT 59.422 38.462 0.00 0.00 0.00 3.06
628 630 7.201165 CGCGTTCAGAGATAAGTTAATCGTATC 60.201 40.741 0.00 0.00 37.63 2.24
629 631 7.804129 GCGTTCAGAGATAAGTTAATCGTATCT 59.196 37.037 10.73 10.73 45.52 1.98
630 632 9.666626 CGTTCAGAGATAAGTTAATCGTATCTT 57.333 33.333 11.60 0.00 43.89 2.40
661 663 9.189156 ACTCTAGCTTAATTATCCAAAATTGCA 57.811 29.630 0.00 0.00 31.63 4.08
662 664 9.455847 CTCTAGCTTAATTATCCAAAATTGCAC 57.544 33.333 0.00 0.00 31.63 4.57
663 665 9.189156 TCTAGCTTAATTATCCAAAATTGCACT 57.811 29.630 0.00 0.00 31.63 4.40
664 666 9.241317 CTAGCTTAATTATCCAAAATTGCACTG 57.759 33.333 0.00 0.00 31.63 3.66
665 667 7.614494 AGCTTAATTATCCAAAATTGCACTGT 58.386 30.769 0.00 0.00 31.63 3.55
666 668 8.748412 AGCTTAATTATCCAAAATTGCACTGTA 58.252 29.630 0.00 0.00 31.63 2.74
667 669 8.807581 GCTTAATTATCCAAAATTGCACTGTAC 58.192 33.333 0.00 0.00 31.63 2.90
668 670 9.301153 CTTAATTATCCAAAATTGCACTGTACC 57.699 33.333 0.00 0.00 31.63 3.34
669 671 6.849085 ATTATCCAAAATTGCACTGTACCA 57.151 33.333 0.00 0.00 0.00 3.25
670 672 6.656632 TTATCCAAAATTGCACTGTACCAA 57.343 33.333 0.00 0.00 0.00 3.67
671 673 5.543507 ATCCAAAATTGCACTGTACCAAA 57.456 34.783 0.00 0.00 0.00 3.28
672 674 5.344743 TCCAAAATTGCACTGTACCAAAA 57.655 34.783 0.00 0.00 0.00 2.44
673 675 5.112686 TCCAAAATTGCACTGTACCAAAAC 58.887 37.500 0.00 0.00 0.00 2.43
674 676 4.872691 CCAAAATTGCACTGTACCAAAACA 59.127 37.500 0.00 0.00 0.00 2.83
675 677 5.352569 CCAAAATTGCACTGTACCAAAACAA 59.647 36.000 0.00 0.00 0.00 2.83
676 678 6.038050 CCAAAATTGCACTGTACCAAAACAAT 59.962 34.615 0.00 0.00 0.00 2.71
677 679 7.225538 CCAAAATTGCACTGTACCAAAACAATA 59.774 33.333 0.00 0.00 0.00 1.90
678 680 7.945033 AAATTGCACTGTACCAAAACAATAG 57.055 32.000 0.00 0.00 0.00 1.73
679 681 6.648879 ATTGCACTGTACCAAAACAATAGT 57.351 33.333 0.00 0.00 0.00 2.12
680 682 7.753309 ATTGCACTGTACCAAAACAATAGTA 57.247 32.000 0.00 0.00 0.00 1.82
681 683 6.548441 TGCACTGTACCAAAACAATAGTAC 57.452 37.500 0.00 0.00 36.47 2.73
682 684 6.056236 TGCACTGTACCAAAACAATAGTACA 58.944 36.000 0.00 0.00 41.96 2.90
683 685 6.542735 TGCACTGTACCAAAACAATAGTACAA 59.457 34.615 0.00 0.00 43.14 2.41
684 686 6.854381 GCACTGTACCAAAACAATAGTACAAC 59.146 38.462 0.00 0.00 43.14 3.32
685 687 7.255001 GCACTGTACCAAAACAATAGTACAACT 60.255 37.037 0.00 0.00 43.14 3.16
686 688 8.617809 CACTGTACCAAAACAATAGTACAACTT 58.382 33.333 0.00 0.00 43.14 2.66
687 689 8.617809 ACTGTACCAAAACAATAGTACAACTTG 58.382 33.333 0.00 0.00 43.14 3.16
688 690 8.734218 TGTACCAAAACAATAGTACAACTTGA 57.266 30.769 8.51 0.00 41.43 3.02
689 691 9.344772 TGTACCAAAACAATAGTACAACTTGAT 57.655 29.630 8.51 0.00 41.43 2.57
692 694 9.528018 ACCAAAACAATAGTACAACTTGATTTG 57.472 29.630 19.42 19.42 39.93 2.32
693 695 9.528018 CCAAAACAATAGTACAACTTGATTTGT 57.472 29.630 21.82 8.94 39.24 2.83
698 700 9.569122 ACAATAGTACAACTTGATTTGTTAGGT 57.431 29.630 8.51 0.00 40.29 3.08
699 701 9.825972 CAATAGTACAACTTGATTTGTTAGGTG 57.174 33.333 0.00 0.00 40.29 4.00
700 702 6.877611 AGTACAACTTGATTTGTTAGGTGG 57.122 37.500 0.00 0.00 40.29 4.61
701 703 4.584327 ACAACTTGATTTGTTAGGTGGC 57.416 40.909 0.00 0.00 36.22 5.01
702 704 3.320826 ACAACTTGATTTGTTAGGTGGCC 59.679 43.478 0.00 0.00 36.22 5.36
703 705 3.525800 ACTTGATTTGTTAGGTGGCCT 57.474 42.857 3.32 0.00 37.71 5.19
704 706 3.844640 ACTTGATTTGTTAGGTGGCCTT 58.155 40.909 3.32 0.00 34.61 4.35
705 707 4.223144 ACTTGATTTGTTAGGTGGCCTTT 58.777 39.130 3.32 0.00 34.61 3.11
706 708 4.039124 ACTTGATTTGTTAGGTGGCCTTTG 59.961 41.667 3.32 0.00 34.61 2.77
707 709 3.571590 TGATTTGTTAGGTGGCCTTTGT 58.428 40.909 3.32 0.00 34.61 2.83
708 710 3.964031 TGATTTGTTAGGTGGCCTTTGTT 59.036 39.130 3.32 0.00 34.61 2.83
709 711 4.407296 TGATTTGTTAGGTGGCCTTTGTTT 59.593 37.500 3.32 0.00 34.61 2.83
710 712 5.598830 TGATTTGTTAGGTGGCCTTTGTTTA 59.401 36.000 3.32 0.00 34.61 2.01
711 713 5.523438 TTTGTTAGGTGGCCTTTGTTTAG 57.477 39.130 3.32 0.00 34.61 1.85
712 714 3.492337 TGTTAGGTGGCCTTTGTTTAGG 58.508 45.455 3.32 0.00 38.40 2.69
719 721 3.800628 CCTTTGTTTAGGCTGCAGC 57.199 52.632 30.88 30.88 41.14 5.25
720 722 1.251251 CCTTTGTTTAGGCTGCAGCT 58.749 50.000 35.82 23.99 41.70 4.24
721 723 2.436417 CCTTTGTTTAGGCTGCAGCTA 58.564 47.619 35.82 22.98 41.70 3.32
722 724 2.162408 CCTTTGTTTAGGCTGCAGCTAC 59.838 50.000 35.82 26.27 41.70 3.58
723 725 2.859165 TTGTTTAGGCTGCAGCTACT 57.141 45.000 35.82 27.06 41.70 2.57
724 726 2.859165 TGTTTAGGCTGCAGCTACTT 57.141 45.000 35.82 21.35 41.70 2.24
725 727 3.973206 TGTTTAGGCTGCAGCTACTTA 57.027 42.857 35.82 17.90 41.70 2.24
726 728 4.487714 TGTTTAGGCTGCAGCTACTTAT 57.512 40.909 35.82 17.86 41.70 1.73
727 729 4.843728 TGTTTAGGCTGCAGCTACTTATT 58.156 39.130 35.82 15.89 41.70 1.40
728 730 5.253330 TGTTTAGGCTGCAGCTACTTATTT 58.747 37.500 35.82 14.64 41.70 1.40
729 731 5.710099 TGTTTAGGCTGCAGCTACTTATTTT 59.290 36.000 35.82 13.70 41.70 1.82
2301 2340 2.867624 TGAAGCTTCAGGTTGCTGATT 58.132 42.857 25.16 0.00 39.71 2.57
2948 3288 5.484998 ACATTGTGAAATTTGGCCCTAATCT 59.515 36.000 0.00 0.00 0.00 2.40
3273 4201 2.034104 ACAGCACTCACCATAGCATG 57.966 50.000 0.00 0.00 0.00 4.06
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
72 74 7.676683 TGTGCTTCTAGGTCCTATTAAGATT 57.323 36.000 18.83 0.00 0.00 2.40
79 81 3.392616 CCCAATGTGCTTCTAGGTCCTAT 59.607 47.826 0.00 0.00 0.00 2.57
96 98 5.047802 CAGTTGCAATGACTTCTAACCCAAT 60.048 40.000 0.59 0.00 0.00 3.16
103 105 2.040278 AGCCCAGTTGCAATGACTTCTA 59.960 45.455 0.59 0.00 0.00 2.10
111 113 1.668419 GTCGATAGCCCAGTTGCAAT 58.332 50.000 0.59 0.00 0.00 3.56
119 121 1.829456 CACCATGGTCGATAGCCCA 59.171 57.895 16.53 0.00 34.66 5.36
120 122 1.598130 GCACCATGGTCGATAGCCC 60.598 63.158 16.53 0.00 0.00 5.19
121 123 1.598130 GGCACCATGGTCGATAGCC 60.598 63.158 23.15 23.15 0.00 3.93
122 124 0.882042 CTGGCACCATGGTCGATAGC 60.882 60.000 16.53 15.16 0.00 2.97
123 125 0.752658 TCTGGCACCATGGTCGATAG 59.247 55.000 16.53 11.20 0.00 2.08
124 126 1.134521 GTTCTGGCACCATGGTCGATA 60.135 52.381 16.53 0.68 0.00 2.92
125 127 0.392998 GTTCTGGCACCATGGTCGAT 60.393 55.000 16.53 0.00 0.00 3.59
126 128 1.003839 GTTCTGGCACCATGGTCGA 60.004 57.895 16.53 6.51 0.00 4.20
127 129 1.300971 CTGTTCTGGCACCATGGTCG 61.301 60.000 16.53 12.06 0.00 4.79
128 130 0.036732 TCTGTTCTGGCACCATGGTC 59.963 55.000 16.53 10.07 0.00 4.02
129 131 0.700564 ATCTGTTCTGGCACCATGGT 59.299 50.000 13.00 13.00 0.00 3.55
130 132 2.715749 TATCTGTTCTGGCACCATGG 57.284 50.000 11.19 11.19 0.00 3.66
131 133 3.812262 TCATATCTGTTCTGGCACCATG 58.188 45.455 0.00 0.00 0.00 3.66
132 134 4.719026 ATCATATCTGTTCTGGCACCAT 57.281 40.909 0.00 0.00 0.00 3.55
133 135 4.080413 TCAATCATATCTGTTCTGGCACCA 60.080 41.667 0.00 0.00 0.00 4.17
134 136 4.454678 TCAATCATATCTGTTCTGGCACC 58.545 43.478 0.00 0.00 0.00 5.01
135 137 6.630444 ATTCAATCATATCTGTTCTGGCAC 57.370 37.500 0.00 0.00 0.00 5.01
136 138 7.040892 GCTAATTCAATCATATCTGTTCTGGCA 60.041 37.037 0.00 0.00 0.00 4.92
137 139 7.303998 GCTAATTCAATCATATCTGTTCTGGC 58.696 38.462 0.00 0.00 0.00 4.85
138 140 7.516481 CGCTAATTCAATCATATCTGTTCTGG 58.484 38.462 0.00 0.00 0.00 3.86
139 141 7.014115 GCGCTAATTCAATCATATCTGTTCTG 58.986 38.462 0.00 0.00 0.00 3.02
140 142 6.707608 TGCGCTAATTCAATCATATCTGTTCT 59.292 34.615 9.73 0.00 0.00 3.01
141 143 6.891624 TGCGCTAATTCAATCATATCTGTTC 58.108 36.000 9.73 0.00 0.00 3.18
142 144 6.707608 TCTGCGCTAATTCAATCATATCTGTT 59.292 34.615 9.73 0.00 0.00 3.16
143 145 6.226052 TCTGCGCTAATTCAATCATATCTGT 58.774 36.000 9.73 0.00 0.00 3.41
144 146 6.716898 TCTGCGCTAATTCAATCATATCTG 57.283 37.500 9.73 0.00 0.00 2.90
145 147 6.128336 GCTTCTGCGCTAATTCAATCATATCT 60.128 38.462 9.73 0.00 0.00 1.98
146 148 6.020372 GCTTCTGCGCTAATTCAATCATATC 58.980 40.000 9.73 0.00 0.00 1.63
147 149 5.471116 TGCTTCTGCGCTAATTCAATCATAT 59.529 36.000 9.73 0.00 43.34 1.78
148 150 4.815846 TGCTTCTGCGCTAATTCAATCATA 59.184 37.500 9.73 0.00 43.34 2.15
149 151 3.628942 TGCTTCTGCGCTAATTCAATCAT 59.371 39.130 9.73 0.00 43.34 2.45
150 152 3.009026 TGCTTCTGCGCTAATTCAATCA 58.991 40.909 9.73 0.00 43.34 2.57
151 153 3.680642 TGCTTCTGCGCTAATTCAATC 57.319 42.857 9.73 0.00 43.34 2.67
152 154 4.644103 ATTGCTTCTGCGCTAATTCAAT 57.356 36.364 9.73 10.15 43.34 2.57
153 155 4.414852 GAATTGCTTCTGCGCTAATTCAA 58.585 39.130 9.73 8.15 43.34 2.69
154 156 3.181497 GGAATTGCTTCTGCGCTAATTCA 60.181 43.478 9.73 0.00 43.34 2.57
155 157 3.181497 TGGAATTGCTTCTGCGCTAATTC 60.181 43.478 9.73 13.76 43.34 2.17
156 158 2.754552 TGGAATTGCTTCTGCGCTAATT 59.245 40.909 9.73 6.04 43.34 1.40
157 159 2.368439 TGGAATTGCTTCTGCGCTAAT 58.632 42.857 9.73 0.00 43.34 1.73
158 160 1.819928 TGGAATTGCTTCTGCGCTAA 58.180 45.000 9.73 1.80 43.34 3.09
159 161 1.819928 TTGGAATTGCTTCTGCGCTA 58.180 45.000 9.73 0.00 43.34 4.26
160 162 1.135199 CATTGGAATTGCTTCTGCGCT 60.135 47.619 9.73 0.00 43.34 5.92
161 163 1.274596 CATTGGAATTGCTTCTGCGC 58.725 50.000 0.00 0.00 43.34 6.09
162 164 2.095110 TCACATTGGAATTGCTTCTGCG 60.095 45.455 0.00 0.00 43.34 5.18
163 165 3.508762 CTCACATTGGAATTGCTTCTGC 58.491 45.455 0.00 0.00 40.20 4.26
164 166 3.508762 GCTCACATTGGAATTGCTTCTG 58.491 45.455 0.00 0.00 0.00 3.02
165 167 2.494870 GGCTCACATTGGAATTGCTTCT 59.505 45.455 0.00 0.00 0.00 2.85
166 168 2.494870 AGGCTCACATTGGAATTGCTTC 59.505 45.455 0.00 0.00 0.00 3.86
167 169 2.232941 CAGGCTCACATTGGAATTGCTT 59.767 45.455 0.00 0.00 0.00 3.91
168 170 1.822990 CAGGCTCACATTGGAATTGCT 59.177 47.619 0.00 0.00 0.00 3.91
169 171 1.820519 TCAGGCTCACATTGGAATTGC 59.179 47.619 0.00 0.00 0.00 3.56
170 172 4.430007 CATTCAGGCTCACATTGGAATTG 58.570 43.478 0.00 0.00 0.00 2.32
171 173 3.118884 GCATTCAGGCTCACATTGGAATT 60.119 43.478 0.00 0.00 0.00 2.17
172 174 2.429610 GCATTCAGGCTCACATTGGAAT 59.570 45.455 0.00 0.00 0.00 3.01
173 175 1.820519 GCATTCAGGCTCACATTGGAA 59.179 47.619 0.00 0.00 0.00 3.53
174 176 1.005097 AGCATTCAGGCTCACATTGGA 59.995 47.619 0.00 0.00 41.05 3.53
175 177 1.471119 AGCATTCAGGCTCACATTGG 58.529 50.000 0.00 0.00 41.05 3.16
176 178 4.337274 TGAATAGCATTCAGGCTCACATTG 59.663 41.667 7.27 0.00 44.54 2.82
177 179 4.529897 TGAATAGCATTCAGGCTCACATT 58.470 39.130 7.27 0.00 44.54 2.71
178 180 4.160642 TGAATAGCATTCAGGCTCACAT 57.839 40.909 7.27 0.00 44.54 3.21
179 181 3.632643 TGAATAGCATTCAGGCTCACA 57.367 42.857 7.27 0.00 44.54 3.58
180 182 6.484643 TCTTAATGAATAGCATTCAGGCTCAC 59.515 38.462 14.16 0.00 43.64 3.51
181 183 6.594744 TCTTAATGAATAGCATTCAGGCTCA 58.405 36.000 14.16 0.00 43.64 4.26
182 184 7.308469 CCTTCTTAATGAATAGCATTCAGGCTC 60.308 40.741 14.16 0.00 43.64 4.70
183 185 6.489361 CCTTCTTAATGAATAGCATTCAGGCT 59.511 38.462 14.16 0.00 43.64 4.58
184 186 6.294397 CCCTTCTTAATGAATAGCATTCAGGC 60.294 42.308 14.16 0.00 43.64 4.85
185 187 6.208204 CCCCTTCTTAATGAATAGCATTCAGG 59.792 42.308 14.16 9.33 43.64 3.86
186 188 6.774656 ACCCCTTCTTAATGAATAGCATTCAG 59.225 38.462 14.16 0.00 43.64 3.02
187 189 6.547141 CACCCCTTCTTAATGAATAGCATTCA 59.453 38.462 12.06 12.06 43.64 2.57
188 190 6.515696 GCACCCCTTCTTAATGAATAGCATTC 60.516 42.308 0.00 0.00 43.64 2.67
190 192 4.829492 GCACCCCTTCTTAATGAATAGCAT 59.171 41.667 0.00 0.00 39.43 3.79
191 193 4.079787 AGCACCCCTTCTTAATGAATAGCA 60.080 41.667 0.00 0.00 33.71 3.49
192 194 4.464947 AGCACCCCTTCTTAATGAATAGC 58.535 43.478 0.00 0.00 33.71 2.97
193 195 9.965902 AATATAGCACCCCTTCTTAATGAATAG 57.034 33.333 0.00 0.00 33.71 1.73
200 202 8.822805 CCTGTATAATATAGCACCCCTTCTTAA 58.177 37.037 0.00 0.00 0.00 1.85
201 203 7.093024 GCCTGTATAATATAGCACCCCTTCTTA 60.093 40.741 0.00 0.00 0.00 2.10
202 204 6.296489 GCCTGTATAATATAGCACCCCTTCTT 60.296 42.308 0.00 0.00 0.00 2.52
203 205 5.189934 GCCTGTATAATATAGCACCCCTTCT 59.810 44.000 0.00 0.00 0.00 2.85
204 206 5.429130 GCCTGTATAATATAGCACCCCTTC 58.571 45.833 0.00 0.00 0.00 3.46
205 207 4.081087 CGCCTGTATAATATAGCACCCCTT 60.081 45.833 0.00 0.00 0.00 3.95
206 208 3.451178 CGCCTGTATAATATAGCACCCCT 59.549 47.826 0.00 0.00 0.00 4.79
207 209 3.449737 TCGCCTGTATAATATAGCACCCC 59.550 47.826 0.00 0.00 0.00 4.95
208 210 4.730949 TCGCCTGTATAATATAGCACCC 57.269 45.455 0.00 0.00 0.00 4.61
209 211 6.106673 ACAATCGCCTGTATAATATAGCACC 58.893 40.000 0.00 0.00 0.00 5.01
210 212 7.036220 AGACAATCGCCTGTATAATATAGCAC 58.964 38.462 0.00 0.00 0.00 4.40
211 213 7.170393 AGACAATCGCCTGTATAATATAGCA 57.830 36.000 0.00 0.00 0.00 3.49
212 214 6.415280 CGAGACAATCGCCTGTATAATATAGC 59.585 42.308 0.00 0.00 45.98 2.97
213 215 7.900299 CGAGACAATCGCCTGTATAATATAG 57.100 40.000 0.00 0.00 45.98 1.31
228 230 2.093658 TCAAAGGGTAGGCGAGACAATC 60.094 50.000 0.00 0.00 0.00 2.67
229 231 1.906574 TCAAAGGGTAGGCGAGACAAT 59.093 47.619 0.00 0.00 0.00 2.71
230 232 1.344065 TCAAAGGGTAGGCGAGACAA 58.656 50.000 0.00 0.00 0.00 3.18
231 233 1.001633 GTTCAAAGGGTAGGCGAGACA 59.998 52.381 0.00 0.00 0.00 3.41
232 234 1.275573 AGTTCAAAGGGTAGGCGAGAC 59.724 52.381 0.00 0.00 0.00 3.36
233 235 1.640917 AGTTCAAAGGGTAGGCGAGA 58.359 50.000 0.00 0.00 0.00 4.04
234 236 3.604875 TTAGTTCAAAGGGTAGGCGAG 57.395 47.619 0.00 0.00 0.00 5.03
235 237 4.563140 ATTTAGTTCAAAGGGTAGGCGA 57.437 40.909 0.00 0.00 0.00 5.54
236 238 4.142469 CCAATTTAGTTCAAAGGGTAGGCG 60.142 45.833 0.00 0.00 0.00 5.52
237 239 4.770531 ACCAATTTAGTTCAAAGGGTAGGC 59.229 41.667 0.00 0.00 36.49 3.93
238 240 5.417894 GGACCAATTTAGTTCAAAGGGTAGG 59.582 44.000 0.00 0.00 37.68 3.18
239 241 6.007703 TGGACCAATTTAGTTCAAAGGGTAG 58.992 40.000 0.00 0.00 37.68 3.18
240 242 5.954757 TGGACCAATTTAGTTCAAAGGGTA 58.045 37.500 0.00 0.00 37.68 3.69
241 243 4.810345 TGGACCAATTTAGTTCAAAGGGT 58.190 39.130 0.00 0.00 39.30 4.34
242 244 5.799827 TTGGACCAATTTAGTTCAAAGGG 57.200 39.130 1.69 0.00 29.64 3.95
243 245 7.044798 TGTTTTGGACCAATTTAGTTCAAAGG 58.955 34.615 7.99 0.00 42.25 3.11
244 246 8.661352 ATGTTTTGGACCAATTTAGTTCAAAG 57.339 30.769 7.99 0.00 42.25 2.77
245 247 7.713073 GGATGTTTTGGACCAATTTAGTTCAAA 59.287 33.333 7.99 7.47 40.22 2.69
246 248 7.147655 TGGATGTTTTGGACCAATTTAGTTCAA 60.148 33.333 7.99 0.00 30.72 2.69
247 249 6.325028 TGGATGTTTTGGACCAATTTAGTTCA 59.675 34.615 7.99 0.00 0.00 3.18
248 250 6.754193 TGGATGTTTTGGACCAATTTAGTTC 58.246 36.000 7.99 1.35 0.00 3.01
249 251 6.739331 TGGATGTTTTGGACCAATTTAGTT 57.261 33.333 7.99 0.00 0.00 2.24
250 252 6.933514 ATGGATGTTTTGGACCAATTTAGT 57.066 33.333 7.99 0.00 36.00 2.24
251 253 7.160726 ACAATGGATGTTTTGGACCAATTTAG 58.839 34.615 7.99 0.00 40.06 1.85
252 254 7.072263 ACAATGGATGTTTTGGACCAATTTA 57.928 32.000 7.99 0.00 40.06 1.40
253 255 5.939447 ACAATGGATGTTTTGGACCAATTT 58.061 33.333 7.99 0.00 40.06 1.82
254 256 5.565455 ACAATGGATGTTTTGGACCAATT 57.435 34.783 7.99 0.00 40.06 2.32
255 257 6.872585 ATACAATGGATGTTTTGGACCAAT 57.127 33.333 7.99 0.00 43.63 3.16
256 258 6.268617 TCAATACAATGGATGTTTTGGACCAA 59.731 34.615 1.69 1.69 45.49 3.67
257 259 5.777223 TCAATACAATGGATGTTTTGGACCA 59.223 36.000 10.42 0.00 45.49 4.02
258 260 6.279513 TCAATACAATGGATGTTTTGGACC 57.720 37.500 10.42 0.00 45.49 4.46
259 261 8.776376 ATTTCAATACAATGGATGTTTTGGAC 57.224 30.769 10.42 0.00 45.49 4.02
260 262 9.434420 GAATTTCAATACAATGGATGTTTTGGA 57.566 29.630 10.42 1.57 45.49 3.53
261 263 9.439500 AGAATTTCAATACAATGGATGTTTTGG 57.561 29.630 10.42 0.00 45.49 3.28
283 285 9.914131 GTTTTGCCTCTATAAGTTGAAAAGAAT 57.086 29.630 0.00 0.00 0.00 2.40
284 286 8.357402 GGTTTTGCCTCTATAAGTTGAAAAGAA 58.643 33.333 0.00 0.00 0.00 2.52
285 287 7.039993 GGGTTTTGCCTCTATAAGTTGAAAAGA 60.040 37.037 0.00 0.00 37.43 2.52
286 288 7.090808 GGGTTTTGCCTCTATAAGTTGAAAAG 58.909 38.462 0.00 0.00 37.43 2.27
287 289 6.551601 TGGGTTTTGCCTCTATAAGTTGAAAA 59.448 34.615 0.00 0.00 37.43 2.29
288 290 6.071984 TGGGTTTTGCCTCTATAAGTTGAAA 58.928 36.000 0.00 0.00 37.43 2.69
289 291 5.636123 TGGGTTTTGCCTCTATAAGTTGAA 58.364 37.500 0.00 0.00 37.43 2.69
290 292 5.249780 TGGGTTTTGCCTCTATAAGTTGA 57.750 39.130 0.00 0.00 37.43 3.18
291 293 5.975693 TTGGGTTTTGCCTCTATAAGTTG 57.024 39.130 0.00 0.00 37.43 3.16
292 294 5.480422 CCTTTGGGTTTTGCCTCTATAAGTT 59.520 40.000 0.00 0.00 37.43 2.66
293 295 5.016831 CCTTTGGGTTTTGCCTCTATAAGT 58.983 41.667 0.00 0.00 37.43 2.24
294 296 5.261216 TCCTTTGGGTTTTGCCTCTATAAG 58.739 41.667 0.00 0.00 37.43 1.73
295 297 5.263872 TCCTTTGGGTTTTGCCTCTATAA 57.736 39.130 0.00 0.00 37.43 0.98
296 298 4.938575 TCCTTTGGGTTTTGCCTCTATA 57.061 40.909 0.00 0.00 37.43 1.31
297 299 3.825908 TCCTTTGGGTTTTGCCTCTAT 57.174 42.857 0.00 0.00 37.43 1.98
298 300 3.825908 ATCCTTTGGGTTTTGCCTCTA 57.174 42.857 0.00 0.00 37.43 2.43
299 301 2.702270 ATCCTTTGGGTTTTGCCTCT 57.298 45.000 0.00 0.00 37.43 3.69
300 302 2.632512 TGAATCCTTTGGGTTTTGCCTC 59.367 45.455 0.00 0.00 37.43 4.70
301 303 2.688477 TGAATCCTTTGGGTTTTGCCT 58.312 42.857 0.00 0.00 37.43 4.75
302 304 3.244526 ACATGAATCCTTTGGGTTTTGCC 60.245 43.478 0.00 0.00 0.00 4.52
303 305 3.996363 GACATGAATCCTTTGGGTTTTGC 59.004 43.478 0.00 0.00 0.00 3.68
304 306 5.212532 TGACATGAATCCTTTGGGTTTTG 57.787 39.130 0.00 0.00 0.00 2.44
305 307 5.366477 ACTTGACATGAATCCTTTGGGTTTT 59.634 36.000 0.00 0.00 0.00 2.43
306 308 4.901250 ACTTGACATGAATCCTTTGGGTTT 59.099 37.500 0.00 0.00 0.00 3.27
307 309 4.482990 ACTTGACATGAATCCTTTGGGTT 58.517 39.130 0.00 0.00 0.00 4.11
308 310 4.082125 GACTTGACATGAATCCTTTGGGT 58.918 43.478 0.00 0.00 0.00 4.51
309 311 4.338879 AGACTTGACATGAATCCTTTGGG 58.661 43.478 0.00 0.00 0.00 4.12
310 312 5.972107 AAGACTTGACATGAATCCTTTGG 57.028 39.130 0.00 0.00 0.00 3.28
311 313 6.973843 TGAAAGACTTGACATGAATCCTTTG 58.026 36.000 0.00 0.00 0.00 2.77
312 314 6.208204 CCTGAAAGACTTGACATGAATCCTTT 59.792 38.462 0.00 1.25 34.07 3.11
313 315 5.709164 CCTGAAAGACTTGACATGAATCCTT 59.291 40.000 0.00 0.00 34.07 3.36
314 316 5.013495 TCCTGAAAGACTTGACATGAATCCT 59.987 40.000 0.00 0.00 34.07 3.24
315 317 5.248640 TCCTGAAAGACTTGACATGAATCC 58.751 41.667 0.00 0.00 34.07 3.01
316 318 6.128063 CCTTCCTGAAAGACTTGACATGAATC 60.128 42.308 0.00 0.00 37.12 2.52
317 319 5.709164 CCTTCCTGAAAGACTTGACATGAAT 59.291 40.000 0.00 0.00 37.12 2.57
318 320 5.065914 CCTTCCTGAAAGACTTGACATGAA 58.934 41.667 0.00 10.45 37.12 2.57
319 321 4.103153 ACCTTCCTGAAAGACTTGACATGA 59.897 41.667 0.00 0.00 37.12 3.07
320 322 4.214971 CACCTTCCTGAAAGACTTGACATG 59.785 45.833 0.00 0.00 37.12 3.21
321 323 4.392940 CACCTTCCTGAAAGACTTGACAT 58.607 43.478 0.00 0.00 37.12 3.06
322 324 3.808728 CACCTTCCTGAAAGACTTGACA 58.191 45.455 0.00 0.00 37.12 3.58
323 325 2.550180 GCACCTTCCTGAAAGACTTGAC 59.450 50.000 0.00 0.00 37.12 3.18
324 326 2.439507 AGCACCTTCCTGAAAGACTTGA 59.560 45.455 0.00 0.00 37.12 3.02
325 327 2.551459 CAGCACCTTCCTGAAAGACTTG 59.449 50.000 0.00 0.00 37.12 3.16
326 328 2.173569 ACAGCACCTTCCTGAAAGACTT 59.826 45.455 0.00 0.00 37.12 3.01
327 329 1.771255 ACAGCACCTTCCTGAAAGACT 59.229 47.619 0.00 0.00 37.12 3.24
328 330 2.262423 ACAGCACCTTCCTGAAAGAC 57.738 50.000 0.00 0.00 37.12 3.01
329 331 3.391296 ACTAACAGCACCTTCCTGAAAGA 59.609 43.478 0.00 0.00 37.12 2.52
330 332 3.744660 ACTAACAGCACCTTCCTGAAAG 58.255 45.455 0.00 0.00 34.47 2.62
331 333 3.857157 ACTAACAGCACCTTCCTGAAA 57.143 42.857 0.00 0.00 34.47 2.69
332 334 3.260884 CCTACTAACAGCACCTTCCTGAA 59.739 47.826 0.00 0.00 34.47 3.02
333 335 2.832129 CCTACTAACAGCACCTTCCTGA 59.168 50.000 0.00 0.00 34.47 3.86
334 336 2.832129 TCCTACTAACAGCACCTTCCTG 59.168 50.000 0.00 0.00 36.41 3.86
335 337 3.100671 CTCCTACTAACAGCACCTTCCT 58.899 50.000 0.00 0.00 0.00 3.36
336 338 3.097614 TCTCCTACTAACAGCACCTTCC 58.902 50.000 0.00 0.00 0.00 3.46
337 339 3.764972 ACTCTCCTACTAACAGCACCTTC 59.235 47.826 0.00 0.00 0.00 3.46
338 340 3.511934 CACTCTCCTACTAACAGCACCTT 59.488 47.826 0.00 0.00 0.00 3.50
339 341 3.093057 CACTCTCCTACTAACAGCACCT 58.907 50.000 0.00 0.00 0.00 4.00
340 342 2.166664 CCACTCTCCTACTAACAGCACC 59.833 54.545 0.00 0.00 0.00 5.01
341 343 2.826725 ACCACTCTCCTACTAACAGCAC 59.173 50.000 0.00 0.00 0.00 4.40
342 344 3.170991 ACCACTCTCCTACTAACAGCA 57.829 47.619 0.00 0.00 0.00 4.41
343 345 3.258622 ACAACCACTCTCCTACTAACAGC 59.741 47.826 0.00 0.00 0.00 4.40
344 346 5.010719 TGAACAACCACTCTCCTACTAACAG 59.989 44.000 0.00 0.00 0.00 3.16
345 347 4.897076 TGAACAACCACTCTCCTACTAACA 59.103 41.667 0.00 0.00 0.00 2.41
346 348 5.464030 TGAACAACCACTCTCCTACTAAC 57.536 43.478 0.00 0.00 0.00 2.34
347 349 7.179966 TCTATGAACAACCACTCTCCTACTAA 58.820 38.462 0.00 0.00 0.00 2.24
348 350 6.728411 TCTATGAACAACCACTCTCCTACTA 58.272 40.000 0.00 0.00 0.00 1.82
349 351 5.580998 TCTATGAACAACCACTCTCCTACT 58.419 41.667 0.00 0.00 0.00 2.57
350 352 5.419471 ACTCTATGAACAACCACTCTCCTAC 59.581 44.000 0.00 0.00 0.00 3.18
351 353 5.580998 ACTCTATGAACAACCACTCTCCTA 58.419 41.667 0.00 0.00 0.00 2.94
352 354 4.421131 ACTCTATGAACAACCACTCTCCT 58.579 43.478 0.00 0.00 0.00 3.69
353 355 4.810191 ACTCTATGAACAACCACTCTCC 57.190 45.455 0.00 0.00 0.00 3.71
354 356 8.088981 TCTTAAACTCTATGAACAACCACTCTC 58.911 37.037 0.00 0.00 0.00 3.20
355 357 7.963532 TCTTAAACTCTATGAACAACCACTCT 58.036 34.615 0.00 0.00 0.00 3.24
356 358 8.603242 TTCTTAAACTCTATGAACAACCACTC 57.397 34.615 0.00 0.00 0.00 3.51
357 359 8.974060 TTTCTTAAACTCTATGAACAACCACT 57.026 30.769 0.00 0.00 0.00 4.00
358 360 9.052759 TCTTTCTTAAACTCTATGAACAACCAC 57.947 33.333 0.00 0.00 0.00 4.16
359 361 9.793259 ATCTTTCTTAAACTCTATGAACAACCA 57.207 29.630 0.00 0.00 0.00 3.67
363 365 9.582431 CGGTATCTTTCTTAAACTCTATGAACA 57.418 33.333 0.00 0.00 0.00 3.18
364 366 9.583765 ACGGTATCTTTCTTAAACTCTATGAAC 57.416 33.333 0.00 0.00 0.00 3.18
365 367 9.582431 CACGGTATCTTTCTTAAACTCTATGAA 57.418 33.333 0.00 0.00 0.00 2.57
366 368 8.746530 ACACGGTATCTTTCTTAAACTCTATGA 58.253 33.333 0.00 0.00 0.00 2.15
367 369 8.928270 ACACGGTATCTTTCTTAAACTCTATG 57.072 34.615 0.00 0.00 0.00 2.23
368 370 9.583765 GAACACGGTATCTTTCTTAAACTCTAT 57.416 33.333 0.00 0.00 0.00 1.98
369 371 8.800332 AGAACACGGTATCTTTCTTAAACTCTA 58.200 33.333 0.00 0.00 0.00 2.43
370 372 7.668492 AGAACACGGTATCTTTCTTAAACTCT 58.332 34.615 0.00 0.00 0.00 3.24
371 373 7.886405 AGAACACGGTATCTTTCTTAAACTC 57.114 36.000 0.00 0.00 0.00 3.01
377 379 9.698309 CATCATATAGAACACGGTATCTTTCTT 57.302 33.333 1.56 0.00 30.89 2.52
378 380 8.861086 ACATCATATAGAACACGGTATCTTTCT 58.139 33.333 1.56 1.21 32.99 2.52
382 384 9.462606 TGATACATCATATAGAACACGGTATCT 57.537 33.333 0.00 1.86 36.91 1.98
383 385 9.723447 CTGATACATCATATAGAACACGGTATC 57.277 37.037 0.00 0.00 36.02 2.24
384 386 9.244292 ACTGATACATCATATAGAACACGGTAT 57.756 33.333 0.00 0.00 36.02 2.73
385 387 8.631480 ACTGATACATCATATAGAACACGGTA 57.369 34.615 0.00 0.00 36.02 4.02
386 388 7.526142 ACTGATACATCATATAGAACACGGT 57.474 36.000 0.00 0.00 36.02 4.83
387 389 7.148738 GCAACTGATACATCATATAGAACACGG 60.149 40.741 0.00 0.00 36.02 4.94
388 390 7.596621 AGCAACTGATACATCATATAGAACACG 59.403 37.037 0.00 0.00 36.02 4.49
389 391 8.706936 CAGCAACTGATACATCATATAGAACAC 58.293 37.037 0.00 0.00 36.02 3.32
390 392 7.874528 CCAGCAACTGATACATCATATAGAACA 59.125 37.037 0.00 0.00 36.02 3.18
391 393 7.332926 CCCAGCAACTGATACATCATATAGAAC 59.667 40.741 0.00 0.00 36.02 3.01
392 394 7.016563 ACCCAGCAACTGATACATCATATAGAA 59.983 37.037 0.00 0.00 36.02 2.10
393 395 6.498303 ACCCAGCAACTGATACATCATATAGA 59.502 38.462 0.00 0.00 36.02 1.98
394 396 6.705302 ACCCAGCAACTGATACATCATATAG 58.295 40.000 0.00 0.00 36.02 1.31
395 397 6.498303 AGACCCAGCAACTGATACATCATATA 59.502 38.462 0.00 0.00 36.02 0.86
396 398 5.309020 AGACCCAGCAACTGATACATCATAT 59.691 40.000 0.00 0.00 36.02 1.78
397 399 4.655649 AGACCCAGCAACTGATACATCATA 59.344 41.667 0.00 0.00 36.02 2.15
398 400 3.457380 AGACCCAGCAACTGATACATCAT 59.543 43.478 0.00 0.00 36.02 2.45
399 401 2.840038 AGACCCAGCAACTGATACATCA 59.160 45.455 0.00 0.00 32.44 3.07
400 402 3.550437 AGACCCAGCAACTGATACATC 57.450 47.619 0.00 0.00 32.44 3.06
401 403 5.636903 ATTAGACCCAGCAACTGATACAT 57.363 39.130 0.00 0.00 32.44 2.29
402 404 5.435686 AATTAGACCCAGCAACTGATACA 57.564 39.130 0.00 0.00 32.44 2.29
403 405 6.759497 AAAATTAGACCCAGCAACTGATAC 57.241 37.500 0.00 0.00 32.44 2.24
434 436 9.823647 CAAATCACATATAGAAGTGAAGGTAGT 57.176 33.333 0.00 0.00 46.62 2.73
435 437 9.823647 ACAAATCACATATAGAAGTGAAGGTAG 57.176 33.333 0.00 0.00 46.62 3.18
436 438 9.817809 GACAAATCACATATAGAAGTGAAGGTA 57.182 33.333 0.00 0.00 46.62 3.08
437 439 8.321353 TGACAAATCACATATAGAAGTGAAGGT 58.679 33.333 0.00 0.00 46.62 3.50
438 440 8.722480 TGACAAATCACATATAGAAGTGAAGG 57.278 34.615 0.00 0.00 46.62 3.46
440 442 9.942850 TCTTGACAAATCACATATAGAAGTGAA 57.057 29.630 0.00 0.00 46.62 3.18
451 453 9.811995 CCATGATTTATTCTTGACAAATCACAT 57.188 29.630 15.69 5.28 46.04 3.21
452 454 8.805175 ACCATGATTTATTCTTGACAAATCACA 58.195 29.630 15.69 0.00 46.04 3.58
453 455 9.079833 CACCATGATTTATTCTTGACAAATCAC 57.920 33.333 15.69 0.00 46.04 3.06
454 456 7.760794 GCACCATGATTTATTCTTGACAAATCA 59.239 33.333 15.70 15.70 46.79 2.57
455 457 7.043854 CGCACCATGATTTATTCTTGACAAATC 60.044 37.037 0.00 0.00 38.55 2.17
456 458 6.753279 CGCACCATGATTTATTCTTGACAAAT 59.247 34.615 0.00 0.00 32.55 2.32
457 459 6.092092 CGCACCATGATTTATTCTTGACAAA 58.908 36.000 0.00 0.00 32.55 2.83
458 460 5.639757 CGCACCATGATTTATTCTTGACAA 58.360 37.500 0.00 0.00 32.55 3.18
459 461 4.438608 GCGCACCATGATTTATTCTTGACA 60.439 41.667 0.30 0.00 32.55 3.58
460 462 4.037690 GCGCACCATGATTTATTCTTGAC 58.962 43.478 0.30 0.00 32.55 3.18
461 463 3.693578 TGCGCACCATGATTTATTCTTGA 59.306 39.130 5.66 0.00 32.55 3.02
462 464 4.031418 TGCGCACCATGATTTATTCTTG 57.969 40.909 5.66 0.00 0.00 3.02
463 465 4.717233 TTGCGCACCATGATTTATTCTT 57.283 36.364 11.12 0.00 0.00 2.52
464 466 4.158394 ACTTTGCGCACCATGATTTATTCT 59.842 37.500 11.12 0.00 0.00 2.40
465 467 4.423732 ACTTTGCGCACCATGATTTATTC 58.576 39.130 11.12 0.00 0.00 1.75
466 468 4.454728 ACTTTGCGCACCATGATTTATT 57.545 36.364 11.12 0.00 0.00 1.40
467 469 4.082300 TGAACTTTGCGCACCATGATTTAT 60.082 37.500 11.12 0.00 0.00 1.40
468 470 3.254411 TGAACTTTGCGCACCATGATTTA 59.746 39.130 11.12 0.00 0.00 1.40
469 471 2.035704 TGAACTTTGCGCACCATGATTT 59.964 40.909 11.12 0.00 0.00 2.17
470 472 1.612950 TGAACTTTGCGCACCATGATT 59.387 42.857 11.12 0.00 0.00 2.57
471 473 1.068333 GTGAACTTTGCGCACCATGAT 60.068 47.619 11.12 0.00 0.00 2.45
472 474 0.310543 GTGAACTTTGCGCACCATGA 59.689 50.000 11.12 0.00 0.00 3.07
473 475 0.030504 TGTGAACTTTGCGCACCATG 59.969 50.000 11.12 0.65 0.00 3.66
474 476 0.030638 GTGTGAACTTTGCGCACCAT 59.969 50.000 11.12 0.00 40.03 3.55
475 477 1.029408 AGTGTGAACTTTGCGCACCA 61.029 50.000 11.12 0.00 45.32 4.17
476 478 0.317020 GAGTGTGAACTTTGCGCACC 60.317 55.000 11.12 0.00 45.32 5.01
477 479 0.376852 TGAGTGTGAACTTTGCGCAC 59.623 50.000 11.12 0.00 44.73 5.34
478 480 1.308047 ATGAGTGTGAACTTTGCGCA 58.692 45.000 5.66 5.66 0.00 6.09
479 481 3.747099 ATATGAGTGTGAACTTTGCGC 57.253 42.857 0.00 0.00 0.00 6.09
480 482 6.408858 ACTAATATGAGTGTGAACTTTGCG 57.591 37.500 0.00 0.00 0.00 4.85
481 483 8.175716 GGTAACTAATATGAGTGTGAACTTTGC 58.824 37.037 0.00 0.00 0.00 3.68
482 484 8.665685 GGGTAACTAATATGAGTGTGAACTTTG 58.334 37.037 0.00 0.00 0.00 2.77
483 485 8.603304 AGGGTAACTAATATGAGTGTGAACTTT 58.397 33.333 0.00 0.00 0.00 2.66
484 486 8.147244 AGGGTAACTAATATGAGTGTGAACTT 57.853 34.615 0.00 0.00 0.00 2.66
485 487 7.735326 AGGGTAACTAATATGAGTGTGAACT 57.265 36.000 0.00 0.00 0.00 3.01
498 500 8.545472 TGACAAGCTGTAAATAGGGTAACTAAT 58.455 33.333 0.00 0.00 34.79 1.73
499 501 7.820872 GTGACAAGCTGTAAATAGGGTAACTAA 59.179 37.037 0.00 0.00 34.79 2.24
500 502 7.179694 AGTGACAAGCTGTAAATAGGGTAACTA 59.820 37.037 0.00 0.00 35.80 2.24
501 503 6.013639 AGTGACAAGCTGTAAATAGGGTAACT 60.014 38.462 0.00 0.00 0.00 2.24
502 504 6.171213 AGTGACAAGCTGTAAATAGGGTAAC 58.829 40.000 0.00 0.00 0.00 2.50
503 505 6.368779 AGTGACAAGCTGTAAATAGGGTAA 57.631 37.500 0.00 0.00 0.00 2.85
504 506 6.368779 AAGTGACAAGCTGTAAATAGGGTA 57.631 37.500 0.00 0.00 0.00 3.69
505 507 4.910458 AGTGACAAGCTGTAAATAGGGT 57.090 40.909 0.00 0.00 0.00 4.34
506 508 6.575162 AAAAGTGACAAGCTGTAAATAGGG 57.425 37.500 0.00 0.00 0.00 3.53
531 533 9.844790 CATTGAAGCATCTGTTTTCACTATTAA 57.155 29.630 0.00 0.00 31.11 1.40
532 534 9.013229 ACATTGAAGCATCTGTTTTCACTATTA 57.987 29.630 0.00 0.00 31.11 0.98
533 535 7.889469 ACATTGAAGCATCTGTTTTCACTATT 58.111 30.769 0.00 0.00 31.11 1.73
534 536 7.392673 AGACATTGAAGCATCTGTTTTCACTAT 59.607 33.333 0.00 0.00 31.11 2.12
535 537 6.712095 AGACATTGAAGCATCTGTTTTCACTA 59.288 34.615 0.00 0.00 31.11 2.74
536 538 5.533903 AGACATTGAAGCATCTGTTTTCACT 59.466 36.000 0.00 0.00 31.11 3.41
537 539 5.766222 AGACATTGAAGCATCTGTTTTCAC 58.234 37.500 0.00 0.00 31.11 3.18
538 540 6.395426 AAGACATTGAAGCATCTGTTTTCA 57.605 33.333 0.00 0.00 0.00 2.69
539 541 8.239314 TGATAAGACATTGAAGCATCTGTTTTC 58.761 33.333 0.00 0.00 0.00 2.29
540 542 8.114331 TGATAAGACATTGAAGCATCTGTTTT 57.886 30.769 0.00 0.00 0.00 2.43
541 543 7.692460 TGATAAGACATTGAAGCATCTGTTT 57.308 32.000 0.00 0.00 0.00 2.83
542 544 7.774157 AGATGATAAGACATTGAAGCATCTGTT 59.226 33.333 0.00 0.00 39.56 3.16
543 545 7.281098 AGATGATAAGACATTGAAGCATCTGT 58.719 34.615 0.00 0.00 39.56 3.41
544 546 7.731882 AGATGATAAGACATTGAAGCATCTG 57.268 36.000 0.00 0.00 39.56 2.90
545 547 9.438228 CATAGATGATAAGACATTGAAGCATCT 57.562 33.333 0.00 0.00 42.51 2.90
546 548 9.433153 TCATAGATGATAAGACATTGAAGCATC 57.567 33.333 0.00 0.00 33.08 3.91
547 549 9.961264 ATCATAGATGATAAGACATTGAAGCAT 57.039 29.630 3.10 0.00 45.17 3.79
568 570 9.049523 GCATGACTTTCTCACAAGAATATCATA 57.950 33.333 0.00 0.00 40.75 2.15
569 571 7.555195 TGCATGACTTTCTCACAAGAATATCAT 59.445 33.333 0.00 8.03 42.02 2.45
570 572 6.880529 TGCATGACTTTCTCACAAGAATATCA 59.119 34.615 0.00 5.06 41.12 2.15
571 573 7.279536 TCTGCATGACTTTCTCACAAGAATATC 59.720 37.037 0.00 0.00 41.12 1.63
572 574 7.108194 TCTGCATGACTTTCTCACAAGAATAT 58.892 34.615 0.00 0.00 41.12 1.28
573 575 6.466812 TCTGCATGACTTTCTCACAAGAATA 58.533 36.000 0.00 0.00 41.12 1.75
574 576 5.311265 TCTGCATGACTTTCTCACAAGAAT 58.689 37.500 0.00 0.00 41.12 2.40
575 577 4.707105 TCTGCATGACTTTCTCACAAGAA 58.293 39.130 0.00 0.00 39.78 2.52
576 578 4.341366 TCTGCATGACTTTCTCACAAGA 57.659 40.909 0.00 0.00 0.00 3.02
577 579 5.008415 ACTTTCTGCATGACTTTCTCACAAG 59.992 40.000 0.00 0.00 0.00 3.16
578 580 4.883585 ACTTTCTGCATGACTTTCTCACAA 59.116 37.500 0.00 0.00 0.00 3.33
579 581 4.454678 ACTTTCTGCATGACTTTCTCACA 58.545 39.130 0.00 0.00 0.00 3.58
580 582 4.376819 CGACTTTCTGCATGACTTTCTCAC 60.377 45.833 0.00 0.00 0.00 3.51
581 583 3.742882 CGACTTTCTGCATGACTTTCTCA 59.257 43.478 0.00 0.00 0.00 3.27
582 584 3.424170 GCGACTTTCTGCATGACTTTCTC 60.424 47.826 0.00 0.00 0.00 2.87
583 585 2.481952 GCGACTTTCTGCATGACTTTCT 59.518 45.455 0.00 0.00 0.00 2.52
584 586 2.723010 CGCGACTTTCTGCATGACTTTC 60.723 50.000 0.00 0.00 0.00 2.62
585 587 1.195448 CGCGACTTTCTGCATGACTTT 59.805 47.619 0.00 0.00 0.00 2.66
586 588 0.792640 CGCGACTTTCTGCATGACTT 59.207 50.000 0.00 0.00 0.00 3.01
587 589 0.319900 ACGCGACTTTCTGCATGACT 60.320 50.000 15.93 0.00 0.00 3.41
588 590 0.512952 AACGCGACTTTCTGCATGAC 59.487 50.000 15.93 0.00 0.00 3.06
589 591 0.790207 GAACGCGACTTTCTGCATGA 59.210 50.000 15.93 0.00 0.00 3.07
590 592 0.512518 TGAACGCGACTTTCTGCATG 59.487 50.000 15.93 0.00 0.00 4.06
591 593 0.792640 CTGAACGCGACTTTCTGCAT 59.207 50.000 15.93 0.00 0.00 3.96
592 594 0.249280 TCTGAACGCGACTTTCTGCA 60.249 50.000 15.93 0.00 0.00 4.41
593 595 0.436531 CTCTGAACGCGACTTTCTGC 59.563 55.000 15.93 0.00 0.00 4.26
594 596 2.051879 TCTCTGAACGCGACTTTCTG 57.948 50.000 15.93 10.80 0.00 3.02
595 597 4.082679 ACTTATCTCTGAACGCGACTTTCT 60.083 41.667 15.93 0.00 0.00 2.52
596 598 4.167268 ACTTATCTCTGAACGCGACTTTC 58.833 43.478 15.93 7.12 0.00 2.62
597 599 4.175787 ACTTATCTCTGAACGCGACTTT 57.824 40.909 15.93 0.00 0.00 2.66
598 600 3.851976 ACTTATCTCTGAACGCGACTT 57.148 42.857 15.93 0.00 0.00 3.01
599 601 3.851976 AACTTATCTCTGAACGCGACT 57.148 42.857 15.93 0.00 0.00 4.18
600 602 5.108705 CGATTAACTTATCTCTGAACGCGAC 60.109 44.000 15.93 7.16 0.00 5.19
601 603 4.968181 CGATTAACTTATCTCTGAACGCGA 59.032 41.667 15.93 0.00 0.00 5.87
602 604 4.733887 ACGATTAACTTATCTCTGAACGCG 59.266 41.667 3.53 3.53 0.00 6.01
603 605 7.804129 AGATACGATTAACTTATCTCTGAACGC 59.196 37.037 0.00 0.00 35.95 4.84
604 606 9.666626 AAGATACGATTAACTTATCTCTGAACG 57.333 33.333 0.00 0.00 38.53 3.95
635 637 9.189156 TGCAATTTTGGATAATTAAGCTAGAGT 57.811 29.630 0.00 0.00 0.00 3.24
636 638 9.455847 GTGCAATTTTGGATAATTAAGCTAGAG 57.544 33.333 0.00 0.00 0.00 2.43
637 639 9.189156 AGTGCAATTTTGGATAATTAAGCTAGA 57.811 29.630 0.00 0.00 0.00 2.43
638 640 9.241317 CAGTGCAATTTTGGATAATTAAGCTAG 57.759 33.333 0.00 0.00 0.00 3.42
639 641 8.748412 ACAGTGCAATTTTGGATAATTAAGCTA 58.252 29.630 0.00 0.00 0.00 3.32
640 642 7.614494 ACAGTGCAATTTTGGATAATTAAGCT 58.386 30.769 0.00 0.00 0.00 3.74
641 643 7.832503 ACAGTGCAATTTTGGATAATTAAGC 57.167 32.000 0.00 0.00 0.00 3.09
642 644 9.301153 GGTACAGTGCAATTTTGGATAATTAAG 57.699 33.333 0.00 0.00 0.00 1.85
643 645 8.807118 TGGTACAGTGCAATTTTGGATAATTAA 58.193 29.630 0.00 0.00 0.00 1.40
644 646 8.354711 TGGTACAGTGCAATTTTGGATAATTA 57.645 30.769 0.00 0.00 0.00 1.40
645 647 7.238486 TGGTACAGTGCAATTTTGGATAATT 57.762 32.000 0.00 0.00 0.00 1.40
646 648 6.849085 TGGTACAGTGCAATTTTGGATAAT 57.151 33.333 0.00 0.00 0.00 1.28
647 649 6.656632 TTGGTACAGTGCAATTTTGGATAA 57.343 33.333 0.00 0.00 42.39 1.75
648 650 6.656632 TTTGGTACAGTGCAATTTTGGATA 57.343 33.333 0.00 0.00 42.39 2.59
649 651 5.543507 TTTGGTACAGTGCAATTTTGGAT 57.456 34.783 0.00 0.00 42.39 3.41
650 652 5.112686 GTTTTGGTACAGTGCAATTTTGGA 58.887 37.500 0.00 0.00 42.39 3.53
651 653 4.872691 TGTTTTGGTACAGTGCAATTTTGG 59.127 37.500 0.00 0.00 42.39 3.28
652 654 6.414408 TTGTTTTGGTACAGTGCAATTTTG 57.586 33.333 0.00 0.00 42.39 2.44
653 655 7.984617 ACTATTGTTTTGGTACAGTGCAATTTT 59.015 29.630 0.00 0.00 42.39 1.82
654 656 7.496747 ACTATTGTTTTGGTACAGTGCAATTT 58.503 30.769 0.00 0.00 42.39 1.82
655 657 7.049799 ACTATTGTTTTGGTACAGTGCAATT 57.950 32.000 0.00 0.00 42.39 2.32
656 658 6.648879 ACTATTGTTTTGGTACAGTGCAAT 57.351 33.333 0.00 0.00 42.39 3.56
657 659 6.542735 TGTACTATTGTTTTGGTACAGTGCAA 59.457 34.615 0.00 0.00 42.39 4.08
658 660 6.056236 TGTACTATTGTTTTGGTACAGTGCA 58.944 36.000 0.00 0.00 42.39 4.57
659 661 6.548441 TGTACTATTGTTTTGGTACAGTGC 57.452 37.500 0.00 0.00 42.39 4.40
660 662 8.149973 AGTTGTACTATTGTTTTGGTACAGTG 57.850 34.615 0.00 0.00 43.11 3.66
661 663 8.617809 CAAGTTGTACTATTGTTTTGGTACAGT 58.382 33.333 0.00 0.00 43.11 3.55
662 664 8.832521 TCAAGTTGTACTATTGTTTTGGTACAG 58.167 33.333 2.11 0.00 43.11 2.74
663 665 8.734218 TCAAGTTGTACTATTGTTTTGGTACA 57.266 30.769 2.11 0.00 41.45 2.90
666 668 9.528018 CAAATCAAGTTGTACTATTGTTTTGGT 57.472 29.630 20.11 3.94 38.61 3.67
667 669 9.528018 ACAAATCAAGTTGTACTATTGTTTTGG 57.472 29.630 25.13 16.55 42.43 3.28
672 674 9.569122 ACCTAACAAATCAAGTTGTACTATTGT 57.431 29.630 2.11 5.88 40.86 2.71
673 675 9.825972 CACCTAACAAATCAAGTTGTACTATTG 57.174 33.333 2.11 5.32 40.86 1.90
674 676 9.010029 CCACCTAACAAATCAAGTTGTACTATT 57.990 33.333 2.11 0.00 40.86 1.73
675 677 7.120726 GCCACCTAACAAATCAAGTTGTACTAT 59.879 37.037 2.11 0.00 40.86 2.12
676 678 6.428771 GCCACCTAACAAATCAAGTTGTACTA 59.571 38.462 2.11 0.00 40.86 1.82
677 679 5.240844 GCCACCTAACAAATCAAGTTGTACT 59.759 40.000 2.11 0.00 40.86 2.73
678 680 5.458015 GCCACCTAACAAATCAAGTTGTAC 58.542 41.667 2.11 0.00 40.86 2.90
679 681 4.521256 GGCCACCTAACAAATCAAGTTGTA 59.479 41.667 0.00 0.00 40.86 2.41
680 682 3.320826 GGCCACCTAACAAATCAAGTTGT 59.679 43.478 0.00 0.00 43.58 3.32
681 683 3.573967 AGGCCACCTAACAAATCAAGTTG 59.426 43.478 5.01 0.00 28.47 3.16
682 684 3.844640 AGGCCACCTAACAAATCAAGTT 58.155 40.909 5.01 0.00 28.47 2.66
683 685 3.525800 AGGCCACCTAACAAATCAAGT 57.474 42.857 5.01 0.00 28.47 3.16
684 686 4.039124 ACAAAGGCCACCTAACAAATCAAG 59.961 41.667 5.01 0.00 31.13 3.02
685 687 3.964031 ACAAAGGCCACCTAACAAATCAA 59.036 39.130 5.01 0.00 31.13 2.57
686 688 3.571590 ACAAAGGCCACCTAACAAATCA 58.428 40.909 5.01 0.00 31.13 2.57
687 689 4.600692 AACAAAGGCCACCTAACAAATC 57.399 40.909 5.01 0.00 31.13 2.17
688 690 5.011635 CCTAAACAAAGGCCACCTAACAAAT 59.988 40.000 5.01 0.00 31.13 2.32
689 691 4.342665 CCTAAACAAAGGCCACCTAACAAA 59.657 41.667 5.01 0.00 31.13 2.83
690 692 3.892588 CCTAAACAAAGGCCACCTAACAA 59.107 43.478 5.01 0.00 31.13 2.83
691 693 3.492337 CCTAAACAAAGGCCACCTAACA 58.508 45.455 5.01 0.00 31.13 2.41
701 703 1.251251 AGCTGCAGCCTAAACAAAGG 58.749 50.000 34.39 0.00 43.38 3.11
702 704 3.077359 AGTAGCTGCAGCCTAAACAAAG 58.923 45.455 34.39 0.00 43.38 2.77
703 705 3.140325 AGTAGCTGCAGCCTAAACAAA 57.860 42.857 34.39 7.71 43.38 2.83
704 706 2.859165 AGTAGCTGCAGCCTAAACAA 57.141 45.000 34.39 9.15 43.38 2.83
705 707 2.859165 AAGTAGCTGCAGCCTAAACA 57.141 45.000 34.39 10.62 43.38 2.83
706 708 5.819825 AAATAAGTAGCTGCAGCCTAAAC 57.180 39.130 34.39 25.09 43.38 2.01
707 709 5.064707 CGAAAATAAGTAGCTGCAGCCTAAA 59.935 40.000 34.39 17.11 43.38 1.85
708 710 4.570772 CGAAAATAAGTAGCTGCAGCCTAA 59.429 41.667 34.39 18.10 43.38 2.69
709 711 4.119862 CGAAAATAAGTAGCTGCAGCCTA 58.880 43.478 34.39 21.95 43.38 3.93
710 712 2.939103 CGAAAATAAGTAGCTGCAGCCT 59.061 45.455 34.39 22.47 43.38 4.58
711 713 2.936498 TCGAAAATAAGTAGCTGCAGCC 59.064 45.455 34.39 20.47 43.38 4.85
712 714 3.619038 ACTCGAAAATAAGTAGCTGCAGC 59.381 43.478 31.53 31.53 42.49 5.25
713 715 5.786401 AACTCGAAAATAAGTAGCTGCAG 57.214 39.130 10.11 10.11 0.00 4.41
714 716 7.843490 ATTAACTCGAAAATAAGTAGCTGCA 57.157 32.000 4.12 0.00 0.00 4.41
715 717 7.164335 GCAATTAACTCGAAAATAAGTAGCTGC 59.836 37.037 0.00 0.00 0.00 5.25
716 718 8.175069 TGCAATTAACTCGAAAATAAGTAGCTG 58.825 33.333 0.00 0.00 0.00 4.24
717 719 8.175716 GTGCAATTAACTCGAAAATAAGTAGCT 58.824 33.333 0.00 0.00 0.00 3.32
718 720 7.960738 TGTGCAATTAACTCGAAAATAAGTAGC 59.039 33.333 0.00 0.00 0.00 3.58
719 721 9.478019 CTGTGCAATTAACTCGAAAATAAGTAG 57.522 33.333 0.00 0.00 0.00 2.57
720 722 9.210329 TCTGTGCAATTAACTCGAAAATAAGTA 57.790 29.630 0.00 0.00 0.00 2.24
721 723 8.094798 TCTGTGCAATTAACTCGAAAATAAGT 57.905 30.769 0.00 0.00 0.00 2.24
722 724 8.948853 TTCTGTGCAATTAACTCGAAAATAAG 57.051 30.769 0.00 0.00 0.00 1.73
723 725 8.564574 ACTTCTGTGCAATTAACTCGAAAATAA 58.435 29.630 0.00 0.00 0.00 1.40
724 726 8.094798 ACTTCTGTGCAATTAACTCGAAAATA 57.905 30.769 0.00 0.00 0.00 1.40
725 727 6.970484 ACTTCTGTGCAATTAACTCGAAAAT 58.030 32.000 0.00 0.00 0.00 1.82
726 728 6.371809 ACTTCTGTGCAATTAACTCGAAAA 57.628 33.333 0.00 0.00 0.00 2.29
727 729 6.073440 GGTACTTCTGTGCAATTAACTCGAAA 60.073 38.462 0.00 0.00 0.00 3.46
728 730 5.407387 GGTACTTCTGTGCAATTAACTCGAA 59.593 40.000 0.00 0.00 0.00 3.71
729 731 4.927425 GGTACTTCTGTGCAATTAACTCGA 59.073 41.667 0.00 0.00 0.00 4.04
1143 1146 4.164796 TCTGTGGAGGAAGAATGCATGTAT 59.835 41.667 0.00 0.00 0.00 2.29
2674 2836 8.037166 TCTACATAATCAGCATAACCATAGCAG 58.963 37.037 0.00 0.00 0.00 4.24
3075 3415 5.584649 CGTGATGAAGTATGGAGGCTTAAAA 59.415 40.000 0.00 0.00 0.00 1.52
3273 4201 0.802607 GAGGTACTACAGCTGCGTGC 60.803 60.000 15.27 14.41 41.55 5.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.