Multiple sequence alignment - TraesCS4A01G367600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G367600 chr4A 100.000 7280 0 0 1 7280 640813287 640806008 0.000000e+00 13444.0
1 TraesCS4A01G367600 chr4A 100.000 2137 0 0 7546 9682 640805742 640803606 0.000000e+00 3947.0
2 TraesCS4A01G367600 chr5D 92.728 5734 260 59 1 5630 531537314 531542994 0.000000e+00 8133.0
3 TraesCS4A01G367600 chr5D 93.376 1555 80 16 5713 7251 531542991 531544538 0.000000e+00 2279.0
4 TraesCS4A01G367600 chr5D 93.919 1332 67 3 7630 8955 531544938 531546261 0.000000e+00 1999.0
5 TraesCS4A01G367600 chr5D 88.034 936 88 17 1782 2707 531806066 531806987 0.000000e+00 1086.0
6 TraesCS4A01G367600 chr5D 88.004 942 84 14 1782 2707 531839128 531840056 0.000000e+00 1086.0
7 TraesCS4A01G367600 chr5D 88.165 921 88 15 1782 2693 531804058 531804966 0.000000e+00 1077.0
8 TraesCS4A01G367600 chr5D 87.927 936 86 17 1782 2707 531827554 531828472 0.000000e+00 1077.0
9 TraesCS4A01G367600 chr5D 87.699 943 80 18 1782 2707 531837170 531838093 0.000000e+00 1066.0
10 TraesCS4A01G367600 chr5D 87.273 935 94 13 1782 2707 531835159 531836077 0.000000e+00 1044.0
11 TraesCS4A01G367600 chr5D 87.986 874 85 13 1782 2648 531807766 531808626 0.000000e+00 1014.0
12 TraesCS4A01G367600 chr5D 87.327 797 84 13 1916 2707 531820102 531820886 0.000000e+00 896.0
13 TraesCS4A01G367600 chr5D 86.856 738 74 15 8953 9682 531546295 531547017 0.000000e+00 804.0
14 TraesCS4A01G367600 chr5D 89.027 483 44 6 378 855 531827006 531827484 3.010000e-164 590.0
15 TraesCS4A01G367600 chr5D 88.090 487 50 6 378 859 531825405 531825888 1.090000e-158 571.0
16 TraesCS4A01G367600 chr5D 88.333 480 48 6 385 859 531821431 531821907 3.920000e-158 569.0
17 TraesCS4A01G367600 chr5D 88.333 480 49 5 385 859 531836627 531837104 3.920000e-158 569.0
18 TraesCS4A01G367600 chr5D 83.481 339 44 10 13 345 315332009 315332341 1.220000e-78 305.0
19 TraesCS4A01G367600 chr5D 83.284 341 44 11 12 345 416196511 416196845 1.580000e-77 302.0
20 TraesCS4A01G367600 chr5D 77.336 503 70 25 7659 8123 491536128 491535632 3.470000e-64 257.0
21 TraesCS4A01G367600 chr5D 100.000 28 0 0 7253 7280 531544562 531544589 1.800000e-02 52.8
22 TraesCS4A01G367600 chr5B 89.780 2632 208 33 1782 4371 670925443 670928055 0.000000e+00 3314.0
23 TraesCS4A01G367600 chr5B 92.003 1238 81 12 4403 5630 670928056 670929285 0.000000e+00 1722.0
24 TraesCS4A01G367600 chr5B 89.678 1337 124 13 385 1712 670923953 670925284 0.000000e+00 1692.0
25 TraesCS4A01G367600 chr5B 87.199 1289 122 15 5736 7012 670929523 670930780 0.000000e+00 1426.0
26 TraesCS4A01G367600 chr5B 90.028 1083 63 21 7884 8957 670931906 670932952 0.000000e+00 1360.0
27 TraesCS4A01G367600 chr5B 86.674 908 90 17 1795 2693 670985974 670986859 0.000000e+00 977.0
28 TraesCS4A01G367600 chr5B 86.263 859 91 18 1782 2635 670989963 670990799 0.000000e+00 907.0
29 TraesCS4A01G367600 chr5B 89.226 594 51 5 1782 2372 670958009 670958592 0.000000e+00 730.0
30 TraesCS4A01G367600 chr5B 89.212 482 45 5 378 854 670989413 670989892 6.470000e-166 595.0
31 TraesCS4A01G367600 chr5B 88.727 479 46 5 388 859 670983455 670983932 6.520000e-161 579.0
32 TraesCS4A01G367600 chr5B 88.565 481 48 5 385 859 670994965 670995444 2.340000e-160 577.0
33 TraesCS4A01G367600 chr5B 88.397 474 49 4 388 856 670964776 670965248 5.080000e-157 566.0
34 TraesCS4A01G367600 chr5B 87.553 474 50 7 388 856 670957384 670957853 3.080000e-149 540.0
35 TraesCS4A01G367600 chr5B 87.339 466 54 3 398 859 670987437 670987901 6.660000e-146 529.0
36 TraesCS4A01G367600 chr5B 91.409 291 22 2 8953 9241 670932984 670933273 7.050000e-106 396.0
37 TraesCS4A01G367600 chr5B 83.962 424 38 16 6820 7242 670930588 670930982 7.100000e-101 379.0
38 TraesCS4A01G367600 chr5B 87.160 257 31 2 9244 9500 670941536 670941790 3.420000e-74 291.0
39 TraesCS4A01G367600 chr5B 85.065 308 17 13 7607 7887 670931531 670931836 4.420000e-73 287.0
40 TraesCS4A01G367600 chr5B 77.976 504 66 22 7658 8123 606467743 606467247 3.440000e-69 274.0
41 TraesCS4A01G367600 chr5B 81.013 158 28 2 7968 8123 606476527 606476370 3.670000e-24 124.0
42 TraesCS4A01G367600 chr5B 84.722 72 10 1 399 470 670999628 670999698 4.850000e-08 71.3
43 TraesCS4A01G367600 chr5B 95.122 41 0 2 346 385 670983396 670983435 8.120000e-06 63.9
44 TraesCS4A01G367600 chr5B 93.023 43 2 1 343 385 670923895 670923936 2.920000e-05 62.1
45 TraesCS4A01G367600 chr7D 85.507 345 45 4 1 344 429882632 429882292 1.200000e-93 355.0
46 TraesCS4A01G367600 chr7D 90.826 109 7 3 5629 5734 45680501 45680393 1.010000e-29 143.0
47 TraesCS4A01G367600 chr2D 84.348 345 38 13 1 336 531016401 531016738 3.370000e-84 324.0
48 TraesCS4A01G367600 chr3D 83.768 345 46 6 14 353 539138603 539138942 1.570000e-82 318.0
49 TraesCS4A01G367600 chr3D 88.696 115 8 5 5602 5713 531044200 531044312 1.700000e-27 135.0
50 TraesCS4A01G367600 chr3B 83.333 336 48 6 14 344 617604413 617604081 4.390000e-78 303.0
51 TraesCS4A01G367600 chr5A 78.842 501 65 23 7658 8123 613747227 613746733 5.680000e-77 300.0
52 TraesCS4A01G367600 chr5A 83.333 156 16 7 7969 8123 613717430 613717284 1.700000e-27 135.0
53 TraesCS4A01G367600 chr1A 83.136 338 47 7 13 345 306687488 306687156 5.680000e-77 300.0
54 TraesCS4A01G367600 chr1A 95.699 93 4 0 5627 5719 486046075 486046167 6.060000e-32 150.0
55 TraesCS4A01G367600 chr1D 82.421 347 55 3 1 344 139262114 139261771 2.040000e-76 298.0
56 TraesCS4A01G367600 chr1D 91.667 108 7 2 5618 5724 291792053 291791947 2.180000e-31 148.0
57 TraesCS4A01G367600 chr4B 95.050 101 5 0 5629 5729 500839968 500840068 1.010000e-34 159.0
58 TraesCS4A01G367600 chr2A 97.778 90 2 0 5628 5717 717944036 717943947 1.300000e-33 156.0
59 TraesCS4A01G367600 chr6A 92.593 108 7 1 5622 5728 297654454 297654347 4.680000e-33 154.0
60 TraesCS4A01G367600 chr1B 94.792 96 5 0 5629 5724 392149785 392149880 6.060000e-32 150.0
61 TraesCS4A01G367600 chr2B 96.471 85 3 0 5629 5713 136179738 136179822 3.650000e-29 141.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G367600 chr4A 640803606 640813287 9681 True 8695.500000 13444 100.000000 1 9682 2 chr4A.!!$R1 9681
1 TraesCS4A01G367600 chr5D 531537314 531547017 9703 False 2653.560000 8133 93.375800 1 9682 5 chr5D.!!$F3 9681
2 TraesCS4A01G367600 chr5D 531804058 531808626 4568 False 1059.000000 1086 88.061667 1782 2707 3 chr5D.!!$F4 925
3 TraesCS4A01G367600 chr5D 531835159 531840056 4897 False 941.250000 1086 87.827250 385 2707 4 chr5D.!!$F6 2322
4 TraesCS4A01G367600 chr5D 531820102 531828472 8370 False 740.600000 1077 88.140800 378 2707 5 chr5D.!!$F5 2329
5 TraesCS4A01G367600 chr5B 670923895 670933273 9378 False 1182.011111 3314 89.127444 343 9241 9 chr5B.!!$F5 8898
6 TraesCS4A01G367600 chr5B 670957384 670958592 1208 False 635.000000 730 88.389500 388 2372 2 chr5B.!!$F6 1984
7 TraesCS4A01G367600 chr5B 670983396 670990799 7403 False 608.483333 977 88.889500 346 2693 6 chr5B.!!$F7 2347

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
92 93 2.005971 AGTTCAATCTCGTTACCGGC 57.994 50.000 0.00 0.0 33.95 6.13 F
1222 2193 0.455410 ATGCACGCAGTTGTTTGTGT 59.545 45.000 0.00 0.0 41.61 3.72 F
1231 2202 3.858877 GCAGTTGTTTGTGTGGTTTGACA 60.859 43.478 0.00 0.0 0.00 3.58 F
2389 9171 0.744281 GAAAGGTGGTTGGTGTGGTG 59.256 55.000 0.00 0.0 0.00 4.17 F
3048 11850 2.282180 CTGGTGGTTTGGGTCGGG 60.282 66.667 0.00 0.0 0.00 5.14 F
4523 13354 2.030363 TGCGCAAGTGGGAAATAACAAG 60.030 45.455 8.16 0.0 41.68 3.16 F
5430 14272 0.401738 ACCCGGGATGCTGGATATTG 59.598 55.000 32.02 0.0 0.00 1.90 F
5714 14558 0.113776 TGTGGGACGGAGGAAGTACT 59.886 55.000 0.00 0.0 0.00 2.73 F
6771 15846 0.460311 CCGCCTTATGGAGTTCTCGT 59.540 55.000 0.00 0.0 34.57 4.18 F
6883 15958 0.108138 GCTTCCACCACTATCGTGCT 60.108 55.000 0.00 0.0 39.86 4.40 F
7969 17336 1.202758 AGTCATTGCCACTTCAACCGA 60.203 47.619 0.00 0.0 0.00 4.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1646 2629 0.818296 ACGACCCTTCTTGATCGAGG 59.182 55.000 10.19 3.97 37.97 4.63 R
2383 9165 0.322456 GAAGGCCACTATGCACCACA 60.322 55.000 5.01 0.00 0.00 4.17 R
3050 11852 0.535797 GTGGAAAGGACTACCCCTCG 59.464 60.000 0.00 0.00 34.95 4.63 R
4050 12878 0.250597 ACCCCAAGTAAGGCGTCAAC 60.251 55.000 0.00 0.00 0.00 3.18 R
4824 13658 1.824230 AGCCTGCAACTTTTGTGAACA 59.176 42.857 0.00 0.00 0.00 3.18 R
5695 14539 0.113776 AGTACTTCCTCCGTCCCACA 59.886 55.000 0.00 0.00 0.00 4.17 R
6541 15614 0.176680 AGACTACGAGGCAAGCATGG 59.823 55.000 0.00 0.00 0.00 3.66 R
6831 15906 0.248498 CATGTCACGACGCGGTAGAT 60.248 55.000 12.47 0.00 0.00 1.98 R
7621 16889 0.323629 CTGAGGTAGACCCCGCAAAA 59.676 55.000 0.00 0.00 33.69 2.44 R
8172 17539 0.602638 CGCTGCCCTGAAGTACACAA 60.603 55.000 0.00 0.00 0.00 3.33 R
9431 18851 0.171007 CACTATTTGCTTGGGGCGTG 59.829 55.000 0.00 0.00 45.43 5.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
38 39 3.454375 CTTTGTCCGGCGATATGTTACT 58.546 45.455 9.30 0.00 0.00 2.24
51 52 3.627395 ATGTTACTTGCCCGAGATTCA 57.373 42.857 0.00 0.00 0.00 2.57
57 58 2.009774 CTTGCCCGAGATTCAATCGTT 58.990 47.619 0.00 0.00 38.50 3.85
58 59 2.107950 TGCCCGAGATTCAATCGTTT 57.892 45.000 0.00 0.00 38.50 3.60
65 66 5.523916 CCCGAGATTCAATCGTTTGTATCTT 59.476 40.000 21.81 11.16 44.92 2.40
89 90 7.035840 TCATACCTAGTTCAATCTCGTTACC 57.964 40.000 0.00 0.00 0.00 2.85
92 93 2.005971 AGTTCAATCTCGTTACCGGC 57.994 50.000 0.00 0.00 33.95 6.13
107 108 5.658468 GTTACCGGCAAGTCTCTTTATACT 58.342 41.667 0.00 0.00 0.00 2.12
108 109 4.388378 ACCGGCAAGTCTCTTTATACTC 57.612 45.455 0.00 0.00 0.00 2.59
109 110 3.181489 ACCGGCAAGTCTCTTTATACTCG 60.181 47.826 0.00 0.00 0.00 4.18
113 114 4.804665 GGCAAGTCTCTTTATACTCGTTCC 59.195 45.833 0.00 0.00 0.00 3.62
115 116 6.043411 GCAAGTCTCTTTATACTCGTTCCAT 58.957 40.000 0.00 0.00 0.00 3.41
116 117 7.201145 GCAAGTCTCTTTATACTCGTTCCATA 58.799 38.462 0.00 0.00 0.00 2.74
118 119 9.582431 CAAGTCTCTTTATACTCGTTCCATAAA 57.418 33.333 0.00 0.00 0.00 1.40
121 122 9.745880 GTCTCTTTATACTCGTTCCATAAATCA 57.254 33.333 0.00 0.00 0.00 2.57
254 272 5.878406 ATAGACACCTTTGGAGATACCTG 57.122 43.478 0.00 0.00 39.86 4.00
295 313 3.803778 ACCCAGTTACGAAGTTACGTTTG 59.196 43.478 0.00 0.00 45.48 2.93
319 337 5.278858 GGATACACACTAAGTATTCCTCCGG 60.279 48.000 0.00 0.00 32.60 5.14
356 374 6.980978 CACACGATCTCATAAGGTAGAAATGT 59.019 38.462 0.00 0.00 0.00 2.71
618 1586 5.392595 GGCTAAAAGAACACAATATTGCCGA 60.393 40.000 15.48 0.00 0.00 5.54
725 1694 5.389307 GCATTAGTTCAGCAGATCGATTAGC 60.389 44.000 13.29 13.29 0.00 3.09
733 1702 3.691118 AGCAGATCGATTAGCTTTTTGCA 59.309 39.130 16.83 0.00 45.94 4.08
861 1830 6.541111 AGTGACAACTATTTCCTCGTTTTC 57.459 37.500 0.00 0.00 33.79 2.29
911 1882 3.106827 CCATTGCCAAGGACCCTAATTT 58.893 45.455 0.00 0.00 0.00 1.82
972 1943 5.246429 ACCAAAAACTCTTACAAACCAACCA 59.754 36.000 0.00 0.00 0.00 3.67
992 1963 7.602265 CCAACCATAAGTGGGTTTTATTTTCAG 59.398 37.037 0.00 0.00 45.48 3.02
1009 1980 3.421919 TCAGGAACAAGATGCATGTCA 57.578 42.857 2.46 0.00 0.00 3.58
1037 2008 0.749649 ACTATGAGAGGGCAAGAGCG 59.250 55.000 0.00 0.00 43.41 5.03
1073 2044 2.434702 ACAACGAGAACAAGGAAGAGGT 59.565 45.455 0.00 0.00 0.00 3.85
1117 2088 5.665459 AGTTGAGCCAAGTGAGTATATGTC 58.335 41.667 0.00 0.00 0.00 3.06
1144 2115 5.066375 TGTTCATTTGTGTCCTCAAAGAGTG 59.934 40.000 1.69 0.00 40.00 3.51
1178 2149 8.751302 TTCTTTATTTACCGCTTTCAATTTCC 57.249 30.769 0.00 0.00 0.00 3.13
1210 2181 0.921347 CCACTTCGTACTATGCACGC 59.079 55.000 0.00 0.00 39.23 5.34
1222 2193 0.455410 ATGCACGCAGTTGTTTGTGT 59.545 45.000 0.00 0.00 41.61 3.72
1231 2202 3.858877 GCAGTTGTTTGTGTGGTTTGACA 60.859 43.478 0.00 0.00 0.00 3.58
1563 2546 6.820656 TGCAAAAGAATTTGTGTGGTGTTAAT 59.179 30.769 3.55 0.00 46.19 1.40
1627 2610 9.023962 AGGTATGAAGAATCTTTGCAATAACAA 57.976 29.630 0.00 0.00 0.00 2.83
1655 2638 5.789521 TGTGAACTACAATTCCTCGATCAA 58.210 37.500 0.00 0.00 36.06 2.57
1678 2665 6.165700 AGAAGGGTCGTTTGTTAGACTAAA 57.834 37.500 0.00 0.00 37.52 1.85
1762 2749 6.489700 TCTCAATGGCTAACACTTCAATTTCA 59.510 34.615 0.00 0.00 0.00 2.69
1811 2888 4.891756 ACATCCCTTATTCTTCCAAGCATG 59.108 41.667 0.00 0.00 0.00 4.06
1838 7008 3.959495 AGGTCTGCCATTCCACATAAT 57.041 42.857 0.00 0.00 37.19 1.28
1840 7010 5.589367 AGGTCTGCCATTCCACATAATAT 57.411 39.130 0.00 0.00 37.19 1.28
2007 7180 5.611374 ACATACACCAAATAGATTAGCGCT 58.389 37.500 17.26 17.26 0.00 5.92
2025 7202 9.722056 ATTAGCGCTTATTAATGTTCTTTCAAG 57.278 29.630 18.68 0.00 0.00 3.02
2059 7236 7.535489 ACGGTCAAAGTTTGTCTAATATAGC 57.465 36.000 15.08 2.68 0.00 2.97
2101 7279 5.410355 AAAAATGTGCAGGCATGTTAGAT 57.590 34.783 0.00 0.00 0.00 1.98
2383 9165 1.077357 TGCGTGAAAGGTGGTTGGT 60.077 52.632 0.00 0.00 0.00 3.67
2389 9171 0.744281 GAAAGGTGGTTGGTGTGGTG 59.256 55.000 0.00 0.00 0.00 4.17
2444 9226 7.345691 TGAGCATAAATTATGAACCTCCTTGA 58.654 34.615 16.45 0.00 38.45 3.02
2529 9312 7.716998 ACATAGACATGTGGGACAATAGATTTC 59.283 37.037 1.15 0.00 43.89 2.17
2530 9313 5.118990 AGACATGTGGGACAATAGATTTCG 58.881 41.667 1.15 0.00 44.16 3.46
2546 9333 5.547465 AGATTTCGTCAGTTATTGTCCACA 58.453 37.500 0.00 0.00 0.00 4.17
2555 9342 6.313905 GTCAGTTATTGTCCACATGACCTTAG 59.686 42.308 0.00 0.00 43.78 2.18
2561 9348 3.118408 TGTCCACATGACCTTAGTATGGC 60.118 47.826 0.00 0.00 43.78 4.40
2592 11381 8.607713 TGTAAATAGTCTCCAAAAATAGACCCA 58.392 33.333 0.00 0.00 42.56 4.51
2715 11507 6.929625 TGATTCAAAGTAAGTGAGAGAGAGG 58.070 40.000 0.00 0.00 0.00 3.69
2718 11520 4.767928 TCAAAGTAAGTGAGAGAGAGGGAC 59.232 45.833 0.00 0.00 0.00 4.46
2779 11581 8.989653 AGTGTAAGCTTCTCTAACTATGAAAC 57.010 34.615 0.00 0.00 0.00 2.78
2807 11609 8.982723 GGCATCAAGATATCCCTTTAGTCTATA 58.017 37.037 0.00 0.00 0.00 1.31
2963 11765 9.121658 TCAAGGTACAAACATACATAAAACACA 57.878 29.630 0.00 0.00 0.00 3.72
3025 11827 3.897239 TCTTGAAGTCCTTTTTGCCTCA 58.103 40.909 0.00 0.00 0.00 3.86
3046 11848 2.983592 GCCTGGTGGTTTGGGTCG 60.984 66.667 0.00 0.00 35.27 4.79
3048 11850 2.282180 CTGGTGGTTTGGGTCGGG 60.282 66.667 0.00 0.00 0.00 5.14
3117 11920 7.950045 TCCTAGTCCAATGAGTGGGAAAATGT 61.950 42.308 0.00 0.00 45.59 2.71
3124 11927 2.955660 TGAGTGGGAAAATGTGGTTCAC 59.044 45.455 0.00 0.00 34.56 3.18
3333 12138 6.756542 AGTTCCTGTACTTTTGCAAAAATCAC 59.243 34.615 23.92 19.95 0.00 3.06
3686 12501 9.698309 CACCAAGACTAACATATAGTCCTATTG 57.302 37.037 11.03 9.41 43.61 1.90
3872 12687 8.545229 TCAAATTGCAATGTCGGAAATAAAAT 57.455 26.923 13.82 0.00 0.00 1.82
3882 12710 7.776933 TGTCGGAAATAAAATCAGAGATGAG 57.223 36.000 0.00 0.00 0.00 2.90
3917 12745 5.253330 TGGGTTAAATGCTCAACTTCTAGG 58.747 41.667 0.00 0.00 0.00 3.02
3929 12757 2.339769 ACTTCTAGGGCAAGGTCAGTT 58.660 47.619 0.00 0.00 0.00 3.16
3978 12806 5.224888 CACATATGAAGGCAAATACATGGC 58.775 41.667 10.38 0.00 45.57 4.40
4050 12878 6.401394 TCTTCAGTGGACATGATTCTTACAG 58.599 40.000 0.00 0.00 0.00 2.74
4115 12943 5.463154 CCATTGGGAATTAATGGGGTCTTA 58.537 41.667 9.72 0.00 46.91 2.10
4281 13109 6.918067 TCTGAGTCAGAACAGAAATCCTAA 57.082 37.500 20.65 0.00 37.57 2.69
4308 13136 9.739276 AGTAAGATCACAAATCTTTGGATAACA 57.261 29.630 5.67 0.00 42.34 2.41
4314 13142 8.006298 TCACAAATCTTTGGATAACAACAACT 57.994 30.769 7.51 0.00 42.34 3.16
4443 13272 8.943594 ACCTTGTTTGTGGGAAAGTAAATATA 57.056 30.769 0.00 0.00 0.00 0.86
4523 13354 2.030363 TGCGCAAGTGGGAAATAACAAG 60.030 45.455 8.16 0.00 41.68 3.16
4632 13466 4.023291 ACCACAACAGTCAAATGAAGGTT 58.977 39.130 0.00 0.00 0.00 3.50
4703 13537 5.183522 TGGGCCATTAGGTTTAAAGTTAACG 59.816 40.000 0.00 0.00 37.19 3.18
4712 13546 7.395190 AGGTTTAAAGTTAACGAAAACACCT 57.605 32.000 23.00 17.51 32.89 4.00
4775 13609 4.223923 TCCAAAGGAAAAGGAAAGCAAACA 59.776 37.500 0.00 0.00 0.00 2.83
4784 13618 4.045636 AGGAAAGCAAACAACATGTGAC 57.954 40.909 0.00 0.00 0.00 3.67
4841 13675 2.813061 CCCTGTTCACAAAAGTTGCAG 58.187 47.619 0.00 0.00 0.00 4.41
4894 13728 2.364190 TGGGGACTGGGAGGTAATTTT 58.636 47.619 0.00 0.00 0.00 1.82
5033 13873 1.884579 AGCCGTCGACTTCTACTTCAA 59.115 47.619 14.70 0.00 0.00 2.69
5150 13992 6.322201 AGGCAATATCGTCTTTGAATTGGATT 59.678 34.615 0.00 0.00 0.00 3.01
5230 14072 7.516198 AATATGTCCTTGAATATTGGCTGAC 57.484 36.000 0.00 0.00 29.78 3.51
5250 14092 7.435784 GGCTGACTGCTAAGACTACTTTTATAC 59.564 40.741 4.20 0.00 42.39 1.47
5430 14272 0.401738 ACCCGGGATGCTGGATATTG 59.598 55.000 32.02 0.00 0.00 1.90
5473 14315 9.382244 GTGTGTCGCATATTCTTAAAATTATCC 57.618 33.333 0.00 0.00 0.00 2.59
5497 14339 7.331440 TCCTGTTAATATGTGCAAATTGCTTTG 59.669 33.333 19.34 1.38 45.31 2.77
5511 14355 6.926630 AATTGCTTTGGTCCCATAAAGTAA 57.073 33.333 6.27 6.27 40.79 2.24
5512 14356 5.975693 TTGCTTTGGTCCCATAAAGTAAG 57.024 39.130 0.00 0.00 34.89 2.34
5513 14357 4.993028 TGCTTTGGTCCCATAAAGTAAGT 58.007 39.130 0.00 0.00 36.52 2.24
5514 14358 5.390387 TGCTTTGGTCCCATAAAGTAAGTT 58.610 37.500 0.00 0.00 36.52 2.66
5515 14359 5.242838 TGCTTTGGTCCCATAAAGTAAGTTG 59.757 40.000 0.00 0.00 36.52 3.16
5516 14360 5.475564 GCTTTGGTCCCATAAAGTAAGTTGA 59.524 40.000 0.00 0.00 36.52 3.18
5517 14361 6.015772 GCTTTGGTCCCATAAAGTAAGTTGAA 60.016 38.462 0.00 0.00 36.52 2.69
5518 14362 7.519032 TTTGGTCCCATAAAGTAAGTTGAAG 57.481 36.000 0.00 0.00 0.00 3.02
5519 14363 5.007682 TGGTCCCATAAAGTAAGTTGAAGC 58.992 41.667 0.00 0.00 0.00 3.86
5520 14364 5.007682 GGTCCCATAAAGTAAGTTGAAGCA 58.992 41.667 0.00 0.00 0.00 3.91
5521 14365 5.652452 GGTCCCATAAAGTAAGTTGAAGCAT 59.348 40.000 0.00 0.00 0.00 3.79
5522 14366 6.404734 GGTCCCATAAAGTAAGTTGAAGCATG 60.405 42.308 0.00 0.00 0.00 4.06
5630 14474 4.822036 TTGTTGTACCATTGCACACTAC 57.178 40.909 0.00 0.00 0.00 2.73
5631 14475 4.079980 TGTTGTACCATTGCACACTACT 57.920 40.909 0.00 0.00 0.00 2.57
5632 14476 4.062293 TGTTGTACCATTGCACACTACTC 58.938 43.478 0.00 0.00 0.00 2.59
5633 14477 3.328382 TGTACCATTGCACACTACTCC 57.672 47.619 0.00 0.00 0.00 3.85
5634 14478 2.027561 TGTACCATTGCACACTACTCCC 60.028 50.000 0.00 0.00 0.00 4.30
5635 14479 1.362224 ACCATTGCACACTACTCCCT 58.638 50.000 0.00 0.00 0.00 4.20
5636 14480 1.279271 ACCATTGCACACTACTCCCTC 59.721 52.381 0.00 0.00 0.00 4.30
5637 14481 1.556911 CCATTGCACACTACTCCCTCT 59.443 52.381 0.00 0.00 0.00 3.69
5638 14482 2.625737 CATTGCACACTACTCCCTCTG 58.374 52.381 0.00 0.00 0.00 3.35
5639 14483 1.717032 TTGCACACTACTCCCTCTGT 58.283 50.000 0.00 0.00 0.00 3.41
5640 14484 1.257743 TGCACACTACTCCCTCTGTC 58.742 55.000 0.00 0.00 0.00 3.51
5641 14485 0.533032 GCACACTACTCCCTCTGTCC 59.467 60.000 0.00 0.00 0.00 4.02
5642 14486 1.187087 CACACTACTCCCTCTGTCCC 58.813 60.000 0.00 0.00 0.00 4.46
5643 14487 0.784495 ACACTACTCCCTCTGTCCCA 59.216 55.000 0.00 0.00 0.00 4.37
5644 14488 1.149288 ACACTACTCCCTCTGTCCCAA 59.851 52.381 0.00 0.00 0.00 4.12
5645 14489 2.257207 CACTACTCCCTCTGTCCCAAA 58.743 52.381 0.00 0.00 0.00 3.28
5646 14490 2.637872 CACTACTCCCTCTGTCCCAAAA 59.362 50.000 0.00 0.00 0.00 2.44
5647 14491 3.264450 CACTACTCCCTCTGTCCCAAAAT 59.736 47.826 0.00 0.00 0.00 1.82
5648 14492 4.469945 CACTACTCCCTCTGTCCCAAAATA 59.530 45.833 0.00 0.00 0.00 1.40
5649 14493 5.131142 CACTACTCCCTCTGTCCCAAAATAT 59.869 44.000 0.00 0.00 0.00 1.28
5650 14494 6.326583 CACTACTCCCTCTGTCCCAAAATATA 59.673 42.308 0.00 0.00 0.00 0.86
5651 14495 6.906901 ACTACTCCCTCTGTCCCAAAATATAA 59.093 38.462 0.00 0.00 0.00 0.98
5652 14496 6.253946 ACTCCCTCTGTCCCAAAATATAAG 57.746 41.667 0.00 0.00 0.00 1.73
5653 14497 5.970640 ACTCCCTCTGTCCCAAAATATAAGA 59.029 40.000 0.00 0.00 0.00 2.10
5654 14498 6.447084 ACTCCCTCTGTCCCAAAATATAAGAA 59.553 38.462 0.00 0.00 0.00 2.52
5655 14499 6.659824 TCCCTCTGTCCCAAAATATAAGAAC 58.340 40.000 0.00 0.00 0.00 3.01
5656 14500 5.527582 CCCTCTGTCCCAAAATATAAGAACG 59.472 44.000 0.00 0.00 0.00 3.95
5657 14501 6.113411 CCTCTGTCCCAAAATATAAGAACGT 58.887 40.000 0.00 0.00 0.00 3.99
5658 14502 6.598064 CCTCTGTCCCAAAATATAAGAACGTT 59.402 38.462 0.00 0.00 0.00 3.99
5659 14503 7.120726 CCTCTGTCCCAAAATATAAGAACGTTT 59.879 37.037 0.46 0.00 0.00 3.60
5660 14504 8.398878 TCTGTCCCAAAATATAAGAACGTTTT 57.601 30.769 0.46 0.00 0.00 2.43
5661 14505 8.852135 TCTGTCCCAAAATATAAGAACGTTTTT 58.148 29.630 9.22 9.22 0.00 1.94
5662 14506 8.804688 TGTCCCAAAATATAAGAACGTTTTTG 57.195 30.769 13.87 12.16 37.14 2.44
5663 14507 8.630917 TGTCCCAAAATATAAGAACGTTTTTGA 58.369 29.630 13.87 2.81 38.79 2.69
5664 14508 8.908678 GTCCCAAAATATAAGAACGTTTTTGAC 58.091 33.333 13.87 5.89 38.79 3.18
5665 14509 8.630917 TCCCAAAATATAAGAACGTTTTTGACA 58.369 29.630 13.87 0.01 38.79 3.58
5666 14510 8.696175 CCCAAAATATAAGAACGTTTTTGACAC 58.304 33.333 13.87 0.00 38.79 3.67
5667 14511 9.458374 CCAAAATATAAGAACGTTTTTGACACT 57.542 29.630 13.87 0.00 38.79 3.55
5672 14516 7.781548 ATAAGAACGTTTTTGACACTACACT 57.218 32.000 13.87 0.00 0.00 3.55
5673 14517 8.876275 ATAAGAACGTTTTTGACACTACACTA 57.124 30.769 13.87 0.00 0.00 2.74
5674 14518 6.823678 AGAACGTTTTTGACACTACACTAG 57.176 37.500 0.46 0.00 0.00 2.57
5675 14519 6.335777 AGAACGTTTTTGACACTACACTAGT 58.664 36.000 0.46 0.00 40.28 2.57
5688 14532 6.579491 ACTACACTAGTGTCAAAAACGTTC 57.421 37.500 31.11 0.00 43.74 3.95
5689 14533 6.335777 ACTACACTAGTGTCAAAAACGTTCT 58.664 36.000 31.11 5.44 43.74 3.01
5690 14534 6.815142 ACTACACTAGTGTCAAAAACGTTCTT 59.185 34.615 31.11 4.99 43.74 2.52
5691 14535 7.975616 ACTACACTAGTGTCAAAAACGTTCTTA 59.024 33.333 31.11 8.36 43.74 2.10
5692 14536 7.781548 ACACTAGTGTCAAAAACGTTCTTAT 57.218 32.000 22.95 0.00 40.24 1.73
5693 14537 8.876275 ACACTAGTGTCAAAAACGTTCTTATA 57.124 30.769 22.95 0.00 40.24 0.98
5694 14538 9.485206 ACACTAGTGTCAAAAACGTTCTTATAT 57.515 29.630 22.95 0.00 40.24 0.86
5699 14543 8.073768 AGTGTCAAAAACGTTCTTATATTGTGG 58.926 33.333 0.00 0.00 0.00 4.17
5700 14544 7.325097 GTGTCAAAAACGTTCTTATATTGTGGG 59.675 37.037 0.00 0.00 0.00 4.61
5701 14545 7.228906 TGTCAAAAACGTTCTTATATTGTGGGA 59.771 33.333 0.00 0.00 0.00 4.37
5702 14546 7.536281 GTCAAAAACGTTCTTATATTGTGGGAC 59.464 37.037 0.00 0.00 0.00 4.46
5703 14547 5.789710 AAACGTTCTTATATTGTGGGACG 57.210 39.130 0.00 0.00 0.00 4.79
5704 14548 3.788937 ACGTTCTTATATTGTGGGACGG 58.211 45.455 0.00 0.00 0.00 4.79
5705 14549 3.448301 ACGTTCTTATATTGTGGGACGGA 59.552 43.478 0.00 0.00 0.00 4.69
5706 14550 4.049186 CGTTCTTATATTGTGGGACGGAG 58.951 47.826 0.00 0.00 0.00 4.63
5707 14551 4.377897 GTTCTTATATTGTGGGACGGAGG 58.622 47.826 0.00 0.00 0.00 4.30
5708 14552 3.918566 TCTTATATTGTGGGACGGAGGA 58.081 45.455 0.00 0.00 0.00 3.71
5709 14553 4.291792 TCTTATATTGTGGGACGGAGGAA 58.708 43.478 0.00 0.00 0.00 3.36
5710 14554 4.344102 TCTTATATTGTGGGACGGAGGAAG 59.656 45.833 0.00 0.00 0.00 3.46
5711 14555 1.946984 TATTGTGGGACGGAGGAAGT 58.053 50.000 0.00 0.00 0.00 3.01
5712 14556 1.946984 ATTGTGGGACGGAGGAAGTA 58.053 50.000 0.00 0.00 0.00 2.24
5713 14557 0.971386 TTGTGGGACGGAGGAAGTAC 59.029 55.000 0.00 0.00 0.00 2.73
5714 14558 0.113776 TGTGGGACGGAGGAAGTACT 59.886 55.000 0.00 0.00 0.00 2.73
5715 14559 1.355381 TGTGGGACGGAGGAAGTACTA 59.645 52.381 0.00 0.00 0.00 1.82
5718 14562 3.450096 GTGGGACGGAGGAAGTACTATTT 59.550 47.826 0.00 0.00 0.00 1.40
5720 14564 5.127682 GTGGGACGGAGGAAGTACTATTTAA 59.872 44.000 0.00 0.00 0.00 1.52
5728 14572 9.032420 CGGAGGAAGTACTATTTAATTCTCAAC 57.968 37.037 0.00 0.00 0.00 3.18
6017 15079 2.618241 TCAGTGGAAGCATTGTGTGTTC 59.382 45.455 0.00 0.00 0.00 3.18
6077 15141 6.292150 ACCAGGCTAAAGCTAGATACAAATC 58.708 40.000 1.39 0.00 41.70 2.17
6081 15145 7.443575 CAGGCTAAAGCTAGATACAAATCACAT 59.556 37.037 1.39 0.00 41.70 3.21
6085 15149 9.464714 CTAAAGCTAGATACAAATCACATACGT 57.535 33.333 0.00 0.00 34.28 3.57
6096 15160 2.338015 ACATACGTCCACCGCTCGT 61.338 57.895 0.00 0.00 41.42 4.18
6135 15199 2.864343 GACACACTAATGTATGCCGACC 59.136 50.000 0.00 0.00 36.72 4.79
6172 15237 2.124612 CATGCCATCCTCGCACCA 60.125 61.111 0.00 0.00 39.49 4.17
6252 15319 1.202710 TGCCTTTAGGAAGCACGAACA 60.203 47.619 0.00 0.00 37.39 3.18
6352 15419 3.307550 GGGAGAAGTGGGTTTAGGACTTC 60.308 52.174 0.00 0.00 43.95 3.01
6410 15477 2.932614 GCGTAGAACCTCGTACACTCTA 59.067 50.000 0.00 0.00 0.00 2.43
6412 15479 4.142816 GCGTAGAACCTCGTACACTCTAAA 60.143 45.833 0.00 0.00 0.00 1.85
6427 15494 3.519913 ACTCTAAAGACCAACTCATCCCC 59.480 47.826 0.00 0.00 0.00 4.81
6461 15528 5.864628 TCATCTCGATACCTACTCAATCG 57.135 43.478 0.00 0.00 42.90 3.34
6498 15565 3.969976 CCTATCCTTCAACTCCATCTGGA 59.030 47.826 0.00 0.00 43.08 3.86
6541 15614 3.183323 GCACCACATTGCGCATGC 61.183 61.111 12.75 14.02 43.20 4.06
6543 15616 2.990395 ACCACATTGCGCATGCCA 60.990 55.556 12.75 8.49 41.78 4.92
6544 15617 2.352821 ACCACATTGCGCATGCCAT 61.353 52.632 12.75 0.00 41.78 4.40
6545 15618 1.880796 CCACATTGCGCATGCCATG 60.881 57.895 12.75 14.98 46.70 3.66
6557 15631 0.816825 ATGCCATGCTTGCCTCGTAG 60.817 55.000 0.00 0.00 0.00 3.51
6563 15637 3.493350 CCATGCTTGCCTCGTAGTCTAAT 60.493 47.826 0.00 0.00 0.00 1.73
6581 15655 7.281098 AGTCTAATCTATCTGTCACCGACTAA 58.719 38.462 0.00 0.00 33.15 2.24
6616 15691 3.197790 CACCGCGATCCAAGCCAG 61.198 66.667 8.23 0.00 0.00 4.85
6619 15694 3.869272 CGCGATCCAAGCCAGCAC 61.869 66.667 0.00 0.00 0.00 4.40
6657 15732 7.221452 CCATGCAAATCTAACTAAAAGCATCAC 59.779 37.037 0.00 0.00 39.22 3.06
6685 15760 2.973694 AGCCGGCGACTTTAATTCTA 57.026 45.000 23.20 0.00 0.00 2.10
6698 15773 8.592155 CGACTTTAATTCTATTTCATCACGTGA 58.408 33.333 22.48 22.48 34.25 4.35
6715 15790 4.509970 CACGTGAAACACTCCAACAATAGA 59.490 41.667 10.90 0.00 35.74 1.98
6720 15795 7.647715 CGTGAAACACTCCAACAATAGAAAAAT 59.352 33.333 0.00 0.00 35.74 1.82
6771 15846 0.460311 CCGCCTTATGGAGTTCTCGT 59.540 55.000 0.00 0.00 34.57 4.18
6775 15850 2.810650 CCTTATGGAGTTCTCGTTCCG 58.189 52.381 0.00 0.00 36.22 4.30
6777 15852 3.119245 CCTTATGGAGTTCTCGTTCCGAA 60.119 47.826 0.00 0.00 36.22 4.30
6831 15906 0.911769 AGAATTGTCGCCCTCCATCA 59.088 50.000 0.00 0.00 0.00 3.07
6841 15916 1.464376 CCCTCCATCATCTACCGCGT 61.464 60.000 4.92 0.00 0.00 6.01
6880 15955 0.456221 CTCGCTTCCACCACTATCGT 59.544 55.000 0.00 0.00 0.00 3.73
6883 15958 0.108138 GCTTCCACCACTATCGTGCT 60.108 55.000 0.00 0.00 39.86 4.40
7089 16164 8.514594 CACACACAAACAATTAGTATCCTCAAT 58.485 33.333 0.00 0.00 0.00 2.57
7190 16265 8.208718 TGACATAACTAATGCGCTAAGAAAAT 57.791 30.769 9.73 0.00 39.39 1.82
7245 16344 8.880878 AACAAACTAAATGTTATTGTCCCAAC 57.119 30.769 0.00 0.00 39.14 3.77
7568 16667 3.792515 GGGGGCTTATATACTCTCAGGT 58.207 50.000 0.00 0.00 0.00 4.00
7569 16668 3.770388 GGGGGCTTATATACTCTCAGGTC 59.230 52.174 0.00 0.00 0.00 3.85
7570 16669 4.511294 GGGGGCTTATATACTCTCAGGTCT 60.511 50.000 0.00 0.00 0.00 3.85
7571 16670 5.281611 GGGGGCTTATATACTCTCAGGTCTA 60.282 48.000 0.00 0.00 0.00 2.59
7572 16671 5.653330 GGGGCTTATATACTCTCAGGTCTAC 59.347 48.000 0.00 0.00 0.00 2.59
7573 16672 5.354792 GGGCTTATATACTCTCAGGTCTACG 59.645 48.000 0.00 0.00 0.00 3.51
7574 16673 5.354792 GGCTTATATACTCTCAGGTCTACGG 59.645 48.000 0.00 0.00 0.00 4.02
7575 16674 5.163733 GCTTATATACTCTCAGGTCTACGGC 60.164 48.000 0.00 0.00 0.00 5.68
7576 16675 4.644163 ATATACTCTCAGGTCTACGGCT 57.356 45.455 0.00 0.00 0.00 5.52
7577 16676 5.758790 ATATACTCTCAGGTCTACGGCTA 57.241 43.478 0.00 0.00 0.00 3.93
7578 16677 2.803030 ACTCTCAGGTCTACGGCTAA 57.197 50.000 0.00 0.00 0.00 3.09
7579 16678 3.083122 ACTCTCAGGTCTACGGCTAAA 57.917 47.619 0.00 0.00 0.00 1.85
7580 16679 3.428532 ACTCTCAGGTCTACGGCTAAAA 58.571 45.455 0.00 0.00 0.00 1.52
7581 16680 4.024670 ACTCTCAGGTCTACGGCTAAAAT 58.975 43.478 0.00 0.00 0.00 1.82
7582 16681 4.142138 ACTCTCAGGTCTACGGCTAAAATG 60.142 45.833 0.00 0.00 0.00 2.32
7583 16682 3.767673 TCTCAGGTCTACGGCTAAAATGT 59.232 43.478 0.00 0.00 0.00 2.71
7584 16683 4.951715 TCTCAGGTCTACGGCTAAAATGTA 59.048 41.667 0.00 0.00 0.00 2.29
7585 16684 5.067413 TCTCAGGTCTACGGCTAAAATGTAG 59.933 44.000 0.00 0.00 37.51 2.74
7586 16685 4.708421 TCAGGTCTACGGCTAAAATGTAGT 59.292 41.667 0.00 0.00 37.45 2.73
7587 16686 4.804139 CAGGTCTACGGCTAAAATGTAGTG 59.196 45.833 0.00 0.00 37.45 2.74
7588 16687 4.708421 AGGTCTACGGCTAAAATGTAGTGA 59.292 41.667 0.00 0.00 37.45 3.41
7589 16688 5.363005 AGGTCTACGGCTAAAATGTAGTGAT 59.637 40.000 0.00 0.00 37.45 3.06
7590 16689 6.548622 AGGTCTACGGCTAAAATGTAGTGATA 59.451 38.462 0.00 0.00 37.45 2.15
7591 16690 7.069085 AGGTCTACGGCTAAAATGTAGTGATAA 59.931 37.037 0.00 0.00 37.45 1.75
7592 16691 7.871463 GGTCTACGGCTAAAATGTAGTGATAAT 59.129 37.037 0.00 0.00 37.45 1.28
7593 16692 9.257651 GTCTACGGCTAAAATGTAGTGATAATT 57.742 33.333 0.00 0.00 37.45 1.40
7594 16693 9.472361 TCTACGGCTAAAATGTAGTGATAATTC 57.528 33.333 0.00 0.00 37.45 2.17
7595 16694 7.492352 ACGGCTAAAATGTAGTGATAATTCC 57.508 36.000 0.00 0.00 0.00 3.01
7596 16695 7.051623 ACGGCTAAAATGTAGTGATAATTCCA 58.948 34.615 0.00 0.00 0.00 3.53
7597 16696 7.554835 ACGGCTAAAATGTAGTGATAATTCCAA 59.445 33.333 0.00 0.00 0.00 3.53
7598 16697 8.567948 CGGCTAAAATGTAGTGATAATTCCAAT 58.432 33.333 0.00 0.00 0.00 3.16
7636 16904 4.994907 ATTTTATTTTGCGGGGTCTACC 57.005 40.909 0.00 0.00 39.11 3.18
7809 17104 4.507710 CTGCTTTCAGTAGGCATGTTCTA 58.492 43.478 0.00 0.00 35.61 2.10
7855 17150 3.557228 AGCACATTGAGAATCTCCTCC 57.443 47.619 7.91 0.00 34.92 4.30
7894 17261 9.982651 GTCTATATTTATTAAGTCAGAGCACCA 57.017 33.333 0.00 0.00 0.00 4.17
7969 17336 1.202758 AGTCATTGCCACTTCAACCGA 60.203 47.619 0.00 0.00 0.00 4.69
8059 17426 6.459923 AGCTCAGGTAAACTTCAGAAGTAAG 58.540 40.000 16.46 6.84 41.91 2.34
8172 17539 3.961408 AGCGGATAACTAATCTGACCAGT 59.039 43.478 0.00 0.00 42.81 4.00
8188 17555 1.202758 CCAGTTGTGTACTTCAGGGCA 60.203 52.381 0.00 0.00 33.85 5.36
8214 17581 0.615331 TCCACTGAAGGAGGACATGC 59.385 55.000 0.00 0.00 32.77 4.06
8246 17619 1.172812 ACTTTTTGGGCACGCCTCTC 61.173 55.000 8.20 0.00 36.10 3.20
8282 17655 3.209410 CTCCATGTCCAACTCTAATGCC 58.791 50.000 0.00 0.00 0.00 4.40
8302 17675 6.659745 TGCCGGTATCATGTATAGTAACTT 57.340 37.500 1.90 0.00 0.00 2.66
8311 17684 7.837202 TCATGTATAGTAACTTTGGAAACCG 57.163 36.000 0.00 0.00 0.00 4.44
8324 17697 1.136057 GGAAACCGCTTCGACAATCAC 60.136 52.381 0.00 0.00 34.56 3.06
8329 17702 1.325640 CCGCTTCGACAATCACATCAG 59.674 52.381 0.00 0.00 0.00 2.90
8424 17797 3.698250 TTGCCGAGTAACAGCAACT 57.302 47.368 0.00 0.00 41.35 3.16
8442 17815 4.811024 GCAACTTATCATCGGAGACAATGA 59.189 41.667 0.00 0.00 42.51 2.57
8459 17832 0.958822 TGACACTTGAGCAGCTACGA 59.041 50.000 0.00 0.00 0.00 3.43
8468 17841 4.514781 TGAGCAGCTACGAGAAAACTTA 57.485 40.909 0.00 0.00 0.00 2.24
8484 17857 3.570926 ACTTATTGAGCGACAACGAGA 57.429 42.857 13.47 0.00 41.52 4.04
8534 17908 1.067295 TGAGCATGGTGAACTCCCTT 58.933 50.000 0.00 0.00 0.00 3.95
8540 17914 1.518367 TGGTGAACTCCCTTTCCTGT 58.482 50.000 0.00 0.00 0.00 4.00
8550 17924 2.448961 TCCCTTTCCTGTTTGATTGGGA 59.551 45.455 0.00 0.00 39.87 4.37
8572 17946 1.152830 GTTCCCACTCCCAGGCAAA 59.847 57.895 0.00 0.00 0.00 3.68
8578 17952 2.524306 CCACTCCCAGGCAAACAATAA 58.476 47.619 0.00 0.00 0.00 1.40
8630 18004 1.953686 CCAACCCAAGTCATCAACGTT 59.046 47.619 0.00 0.00 0.00 3.99
8659 18033 1.452833 GAAGCAGCCCTCCATGGAC 60.453 63.158 11.44 0.73 38.35 4.02
8703 18077 0.309922 GCAATCGATGGAGGCACATG 59.690 55.000 3.24 0.00 0.00 3.21
8757 18131 7.805700 GCTTGTGGCATAAAACATAAAATTGT 58.194 30.769 0.00 0.00 41.35 2.71
8763 18137 7.389053 TGGCATAAAACATAAAATTGTTGGACC 59.611 33.333 0.00 0.00 39.68 4.46
8780 18162 5.105567 TGGACCGATGGTTATTGTAATGT 57.894 39.130 0.00 0.00 35.25 2.71
8810 18192 9.100895 CATGTTGTTTTACTTTGTGTTTTGTTG 57.899 29.630 0.00 0.00 0.00 3.33
8822 18204 6.371809 TGTGTTTTGTTGTGATAGACTTCC 57.628 37.500 0.00 0.00 0.00 3.46
8834 18216 2.233305 AGACTTCCGTGTGGACCTAT 57.767 50.000 0.00 0.00 46.45 2.57
8837 18219 3.700038 AGACTTCCGTGTGGACCTATAAG 59.300 47.826 0.00 0.00 46.45 1.73
8838 18220 3.698040 GACTTCCGTGTGGACCTATAAGA 59.302 47.826 0.00 0.00 46.45 2.10
8839 18221 3.700038 ACTTCCGTGTGGACCTATAAGAG 59.300 47.826 0.00 0.00 46.45 2.85
8840 18222 3.377253 TCCGTGTGGACCTATAAGAGT 57.623 47.619 0.00 0.00 40.17 3.24
8841 18223 3.021695 TCCGTGTGGACCTATAAGAGTG 58.978 50.000 0.00 0.00 40.17 3.51
8890 18272 8.424918 TGAAAGCCCAAACTTATGTTTTAATCA 58.575 29.630 4.09 2.37 43.13 2.57
8957 18375 9.466497 AAATCATAGTGTTGACATAAACCTGAT 57.534 29.630 0.00 0.00 0.00 2.90
9047 18467 2.507339 AGGTGCATTTTGTTTGGACG 57.493 45.000 0.00 0.00 36.41 4.79
9085 18505 6.435164 ACTACATCTTATCTTTTGGGCCAAT 58.565 36.000 21.65 7.64 0.00 3.16
9102 18522 3.044986 CCAATCAAAGTTTGACACTGCG 58.955 45.455 20.26 8.63 43.48 5.18
9136 18556 5.122239 CGAAAAGAATGTTGGCAGTATGAGA 59.878 40.000 0.00 0.00 39.69 3.27
9138 18558 5.886960 AAGAATGTTGGCAGTATGAGAAC 57.113 39.130 0.00 0.00 39.69 3.01
9146 18566 4.922206 TGGCAGTATGAGAACCTTGATTT 58.078 39.130 0.00 0.00 39.69 2.17
9170 18590 3.008049 GGTCCAAGGAAAAGCTAGACTCA 59.992 47.826 0.00 0.00 0.00 3.41
9197 18617 3.452627 TGAGAAATAGAGACCAAGGAGGC 59.547 47.826 0.00 0.00 43.14 4.70
9241 18661 1.532505 CGCAATTGAAAGATGGAGGCG 60.533 52.381 10.34 0.00 35.87 5.52
9242 18662 1.202336 GCAATTGAAAGATGGAGGCGG 60.202 52.381 10.34 0.00 0.00 6.13
9266 18686 2.879756 GCAAGGGAGAAACATGTAGGCA 60.880 50.000 0.00 0.00 0.00 4.75
9307 18727 2.417239 GACGGTTCGGTAATTGCATCAA 59.583 45.455 0.00 0.00 0.00 2.57
9352 18772 9.844790 TTATTGACTAAAATGAAGCATCAGTTG 57.155 29.630 5.30 0.00 42.60 3.16
9353 18773 6.258230 TGACTAAAATGAAGCATCAGTTGG 57.742 37.500 5.30 4.88 42.60 3.77
9377 18797 4.829064 ACAAACACAATGAATACACGCT 57.171 36.364 0.00 0.00 0.00 5.07
9379 18799 3.722555 AACACAATGAATACACGCTCG 57.277 42.857 0.00 0.00 0.00 5.03
9380 18800 1.999735 ACACAATGAATACACGCTCGG 59.000 47.619 0.00 0.00 0.00 4.63
9383 18803 0.107897 AATGAATACACGCTCGGCCA 60.108 50.000 2.24 0.00 0.00 5.36
9385 18805 0.529773 TGAATACACGCTCGGCCATC 60.530 55.000 2.24 0.00 0.00 3.51
9393 18813 2.740055 CTCGGCCATCGCATAGCC 60.740 66.667 2.24 0.00 43.53 3.93
9407 18827 3.728864 CGCATAGCCAGAATGAACACAAC 60.729 47.826 0.00 0.00 39.69 3.32
9408 18828 3.191162 GCATAGCCAGAATGAACACAACA 59.809 43.478 0.00 0.00 39.69 3.33
9409 18829 4.321156 GCATAGCCAGAATGAACACAACAA 60.321 41.667 0.00 0.00 39.69 2.83
9410 18830 3.996150 AGCCAGAATGAACACAACAAG 57.004 42.857 0.00 0.00 39.69 3.16
9413 18833 4.887071 AGCCAGAATGAACACAACAAGTAA 59.113 37.500 0.00 0.00 39.69 2.24
9421 18841 1.524165 ACAACAAGTAACGGCGCCA 60.524 52.632 28.98 3.37 0.00 5.69
9440 18860 2.517402 GTTGGTGTCACGCCCCAA 60.517 61.111 4.51 0.00 35.93 4.12
9445 18865 2.124109 TGTCACGCCCCAAGCAAA 60.124 55.556 0.00 0.00 44.04 3.68
9446 18866 1.530419 TGTCACGCCCCAAGCAAAT 60.530 52.632 0.00 0.00 44.04 2.32
9455 18875 2.223805 GCCCCAAGCAAATAGTGTATGC 60.224 50.000 0.00 0.00 42.97 3.14
9457 18877 3.638160 CCCCAAGCAAATAGTGTATGCAT 59.362 43.478 3.79 3.79 42.45 3.96
9460 18880 5.455392 CCAAGCAAATAGTGTATGCATAGC 58.545 41.667 6.67 4.44 42.45 2.97
9473 18894 0.861837 GCATAGCGCCATACACAGTC 59.138 55.000 2.29 0.00 32.94 3.51
9475 18896 0.744874 ATAGCGCCATACACAGTCGT 59.255 50.000 2.29 0.00 0.00 4.34
9496 18917 6.257193 GTCGTTGTACCTATAACCAATGAAGG 59.743 42.308 0.00 0.00 35.33 3.46
9499 18920 6.243216 TGTACCTATAACCAATGAAGGGTC 57.757 41.667 0.00 0.00 37.77 4.46
9534 18955 3.570212 GACTGTGTGGGGCCTGGT 61.570 66.667 0.84 0.00 0.00 4.00
9536 18957 2.282462 CTGTGTGGGGCCTGGTTC 60.282 66.667 0.84 0.00 0.00 3.62
9538 18959 3.897122 GTGTGGGGCCTGGTTCCA 61.897 66.667 0.84 0.00 0.00 3.53
9550 18971 4.012895 GTTCCACGCCTGCACACG 62.013 66.667 2.21 2.21 0.00 4.49
9585 19006 2.679934 CGGACACACGCATGCACAT 61.680 57.895 19.57 0.00 0.00 3.21
9590 19011 0.518969 CACACGCATGCACATACACG 60.519 55.000 19.57 0.50 0.00 4.49
9593 19014 1.297085 CGCATGCACATACACGCAG 60.297 57.895 19.57 0.00 42.37 5.18
9597 19018 1.464219 CATGCACATACACGCAGACAA 59.536 47.619 0.00 0.00 42.37 3.18
9599 19020 2.150390 TGCACATACACGCAGACAAAT 58.850 42.857 0.00 0.00 33.34 2.32
9601 19022 3.748568 TGCACATACACGCAGACAAATAA 59.251 39.130 0.00 0.00 33.34 1.40
9603 19024 4.553429 GCACATACACGCAGACAAATAAAC 59.447 41.667 0.00 0.00 0.00 2.01
9606 19027 3.247563 ACACGCAGACAAATAAACACG 57.752 42.857 0.00 0.00 0.00 4.49
9607 19028 2.610374 ACACGCAGACAAATAAACACGT 59.390 40.909 0.00 0.00 0.00 4.49
9608 19029 3.215244 CACGCAGACAAATAAACACGTC 58.785 45.455 0.00 0.00 0.00 4.34
9609 19030 2.097104 ACGCAGACAAATAAACACGTCG 60.097 45.455 0.00 0.00 33.56 5.12
9610 19031 2.720590 CGCAGACAAATAAACACGTCGG 60.721 50.000 0.00 0.00 33.56 4.79
9611 19032 2.834689 CAGACAAATAAACACGTCGGC 58.165 47.619 0.00 0.00 33.56 5.54
9612 19033 2.222213 CAGACAAATAAACACGTCGGCA 59.778 45.455 0.00 0.00 33.56 5.69
9613 19034 3.071479 AGACAAATAAACACGTCGGCAT 58.929 40.909 0.00 0.00 33.56 4.40
9617 19040 6.200286 AGACAAATAAACACGTCGGCATATAG 59.800 38.462 0.00 0.00 33.56 1.31
9632 19055 5.551233 GGCATATAGCAAAGTCATAGGACA 58.449 41.667 10.58 0.00 45.82 4.02
9633 19056 5.641209 GGCATATAGCAAAGTCATAGGACAG 59.359 44.000 10.58 0.45 45.82 3.51
9638 19061 2.349886 GCAAAGTCATAGGACAGAAGCG 59.650 50.000 10.58 0.00 46.80 4.68
9649 19072 0.807667 ACAGAAGCGATGCCTAAGCG 60.808 55.000 0.00 0.00 44.31 4.68
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
38 39 2.107950 AACGATTGAATCTCGGGCAA 57.892 45.000 3.43 0.00 40.37 4.52
51 52 9.530633 GAACTAGGTATGAAGATACAAACGATT 57.469 33.333 0.00 0.00 36.85 3.34
58 59 8.568794 CGAGATTGAACTAGGTATGAAGATACA 58.431 37.037 0.00 0.00 36.85 2.29
65 66 7.035840 GGTAACGAGATTGAACTAGGTATGA 57.964 40.000 0.00 0.00 0.00 2.15
89 90 4.030134 ACGAGTATAAAGAGACTTGCCG 57.970 45.455 0.00 0.00 32.29 5.69
92 93 9.582431 TTTATGGAACGAGTATAAAGAGACTTG 57.418 33.333 0.00 0.00 34.85 3.16
107 108 5.729510 TGTGACTGATGATTTATGGAACGA 58.270 37.500 0.00 0.00 0.00 3.85
108 109 6.609237 ATGTGACTGATGATTTATGGAACG 57.391 37.500 0.00 0.00 0.00 3.95
109 110 6.694411 GCAATGTGACTGATGATTTATGGAAC 59.306 38.462 0.00 0.00 0.00 3.62
113 114 8.400186 TGTAAGCAATGTGACTGATGATTTATG 58.600 33.333 0.00 0.00 0.00 1.90
115 116 7.920160 TGTAAGCAATGTGACTGATGATTTA 57.080 32.000 0.00 0.00 0.00 1.40
116 117 6.822667 TGTAAGCAATGTGACTGATGATTT 57.177 33.333 0.00 0.00 0.00 2.17
118 119 6.432607 CTTGTAAGCAATGTGACTGATGAT 57.567 37.500 0.00 0.00 33.65 2.45
119 120 5.868043 CTTGTAAGCAATGTGACTGATGA 57.132 39.130 0.00 0.00 33.65 2.92
203 221 2.763933 CATGGATCGAGACTGGGATTG 58.236 52.381 0.00 0.00 0.00 2.67
208 226 0.178767 TTGGCATGGATCGAGACTGG 59.821 55.000 0.00 0.00 0.00 4.00
254 272 4.141711 TGGGTGATCATAAAGGTGCTCTAC 60.142 45.833 0.00 0.00 0.00 2.59
295 313 5.770417 CGGAGGAATACTTAGTGTGTATCC 58.230 45.833 0.00 0.00 31.08 2.59
319 337 0.603569 ATCGTGTGACTCCCTGACAC 59.396 55.000 0.00 0.00 40.71 3.67
356 374 6.261435 TCCACTTCTAAACCTCCTTATGAGA 58.739 40.000 0.00 0.00 44.42 3.27
530 1498 9.165035 CAAGCATCCCAAAATATTGTAAACATT 57.835 29.630 0.00 0.00 34.60 2.71
581 1549 4.207165 TCTTTTAGCCTCACCCATTATGC 58.793 43.478 0.00 0.00 0.00 3.14
618 1586 6.200475 GCGCCGAAAGAACTTTTATATCTAGT 59.800 38.462 0.00 0.00 32.11 2.57
725 1694 4.213906 GGAAATTGTGGGATGTGCAAAAAG 59.786 41.667 0.00 0.00 0.00 2.27
733 1702 6.074648 TGAAACTAAGGAAATTGTGGGATGT 58.925 36.000 0.00 0.00 0.00 3.06
861 1830 5.449553 AGGCAACCCAGATTTTATAAGAGG 58.550 41.667 0.00 0.00 37.17 3.69
911 1882 2.567862 TCACAAGGGGATATGGTGGAA 58.432 47.619 0.00 0.00 0.00 3.53
972 1943 8.485578 TGTTCCTGAAAATAAAACCCACTTAT 57.514 30.769 0.00 0.00 0.00 1.73
992 1963 6.436261 CAATCTATGACATGCATCTTGTTCC 58.564 40.000 0.00 0.00 38.44 3.62
1009 1980 4.756564 TGCCCTCTCATAGTCCAATCTAT 58.243 43.478 0.00 0.00 0.00 1.98
1073 2044 5.624159 ACTTCTTGAATTGTGACATCTCCA 58.376 37.500 0.00 0.00 0.00 3.86
1117 2088 2.217750 TGAGGACACAAATGAACACCG 58.782 47.619 0.00 0.00 0.00 4.94
1178 2149 3.512680 ACGAAGTGGCTAGAAAGAATCG 58.487 45.455 0.00 0.00 42.51 3.34
1210 2181 3.906998 TGTCAAACCACACAAACAACTG 58.093 40.909 0.00 0.00 0.00 3.16
1222 2193 5.913137 AAAACAAGATGTCTGTCAAACCA 57.087 34.783 0.00 0.00 0.00 3.67
1231 2202 7.156876 TGAAGAACACAAAAACAAGATGTCT 57.843 32.000 0.00 0.00 0.00 3.41
1430 2413 8.448615 GCACATAATTTAAACTCGTACTTCCTT 58.551 33.333 0.00 0.00 0.00 3.36
1439 2422 8.963130 TGTGAAAAAGCACATAATTTAAACTCG 58.037 29.630 0.00 0.00 43.35 4.18
1531 2514 6.925165 CCACACAAATTCTTTTGCACTAGATT 59.075 34.615 0.00 0.00 45.01 2.40
1535 2518 5.105554 ACACCACACAAATTCTTTTGCACTA 60.106 36.000 0.00 0.00 45.01 2.74
1537 2520 3.932089 ACACCACACAAATTCTTTTGCAC 59.068 39.130 0.00 0.00 45.01 4.57
1643 2626 2.101582 CGACCCTTCTTGATCGAGGAAT 59.898 50.000 10.19 0.00 36.70 3.01
1644 2627 1.476891 CGACCCTTCTTGATCGAGGAA 59.523 52.381 10.19 2.84 36.70 3.36
1645 2628 1.103803 CGACCCTTCTTGATCGAGGA 58.896 55.000 10.19 0.00 36.70 3.71
1646 2629 0.818296 ACGACCCTTCTTGATCGAGG 59.182 55.000 10.19 3.97 37.97 4.63
1647 2630 2.656560 AACGACCCTTCTTGATCGAG 57.343 50.000 3.24 3.24 37.97 4.04
1650 2633 5.120363 GTCTAACAAACGACCCTTCTTGATC 59.880 44.000 0.00 0.00 0.00 2.92
1651 2634 4.995487 GTCTAACAAACGACCCTTCTTGAT 59.005 41.667 0.00 0.00 0.00 2.57
1653 2636 4.377897 AGTCTAACAAACGACCCTTCTTG 58.622 43.478 0.00 0.00 0.00 3.02
1655 2638 5.796424 TTAGTCTAACAAACGACCCTTCT 57.204 39.130 0.00 0.00 0.00 2.85
1678 2665 1.949525 GAAGCATGTGACAACTGGTGT 59.050 47.619 0.00 0.00 45.74 4.16
1762 2749 8.097791 TCCCTAAACTTTGTATACTAATGGCT 57.902 34.615 4.17 0.00 0.00 4.75
1811 2888 2.501723 TGGAATGGCAGACCTTCTACTC 59.498 50.000 12.64 0.00 36.63 2.59
1866 7037 8.515414 GTGTTTAGTTTCTAGCCAATCATTTCT 58.485 33.333 0.00 0.00 0.00 2.52
2025 7202 9.962783 AGACAAACTTTGACCGTATAGATATAC 57.037 33.333 8.55 0.69 36.15 1.47
2091 7269 4.651994 CACTTCAACCGAATCTAACATGC 58.348 43.478 0.00 0.00 0.00 4.06
2093 7271 4.323417 TGCACTTCAACCGAATCTAACAT 58.677 39.130 0.00 0.00 0.00 2.71
2101 7279 7.624360 AATAATAGATTGCACTTCAACCGAA 57.376 32.000 0.00 0.00 37.53 4.30
2331 9113 5.593095 ACCACATCTTATCTGCGTAGAGTAA 59.407 40.000 9.62 7.18 36.14 2.24
2383 9165 0.322456 GAAGGCCACTATGCACCACA 60.322 55.000 5.01 0.00 0.00 4.17
2389 9171 3.268023 AGTTGTAGAAGGCCACTATGC 57.732 47.619 5.01 3.41 0.00 3.14
2444 9226 6.863126 GCATGCACTTATCTTTGTTTAGTGTT 59.137 34.615 14.21 0.00 38.70 3.32
2529 9312 4.584029 GTCATGTGGACAATAACTGACG 57.416 45.455 0.00 0.00 46.19 4.35
2555 9342 9.502091 TTGGAGACTATTTACATAATGCCATAC 57.498 33.333 0.00 0.00 0.00 2.39
2602 11391 7.298854 GGCACTTACTTCAGTTTTGATAGAAC 58.701 38.462 0.00 0.00 32.27 3.01
2715 11507 4.487714 TTCTCTCTCTCTCTCTCTGTCC 57.512 50.000 0.00 0.00 0.00 4.02
2718 11520 7.050377 AGTGTAATTCTCTCTCTCTCTCTCTG 58.950 42.308 0.00 0.00 0.00 3.35
2763 11565 6.946340 TGATGCCAGTTTCATAGTTAGAGAA 58.054 36.000 0.00 0.00 0.00 2.87
2779 11581 5.874093 ACTAAAGGGATATCTTGATGCCAG 58.126 41.667 2.05 0.00 39.70 4.85
2963 11765 6.564499 GCATTTGCATTCTTGTCAAATTCGTT 60.564 34.615 0.00 0.00 37.42 3.85
3025 11827 2.201210 CCAAACCACCAGGCCCTT 59.799 61.111 0.00 0.00 39.06 3.95
3046 11848 3.997756 AAGGACTACCCCTCGCCCC 62.998 68.421 0.00 0.00 34.95 5.80
3048 11850 1.521141 GAAAGGACTACCCCTCGCC 59.479 63.158 0.00 0.00 34.95 5.54
3050 11852 0.535797 GTGGAAAGGACTACCCCTCG 59.464 60.000 0.00 0.00 34.95 4.63
3124 11927 7.222872 AGCTTTATAGGAGATTCACCATTCAG 58.777 38.462 2.86 0.00 0.00 3.02
3323 12128 3.490526 AGTTGACAATGCGTGATTTTTGC 59.509 39.130 0.00 0.00 0.00 3.68
3520 12329 8.246180 GTGCTTGCCAAAATATAGTGCATATAT 58.754 33.333 0.00 0.00 38.48 0.86
3605 12414 9.092338 TGTTATATATCCGGTAGGTGTTGTTAT 57.908 33.333 0.00 0.00 39.05 1.89
3686 12501 3.123621 CGTATTGACAAGCTTGTGAGGTC 59.876 47.826 35.67 20.79 42.43 3.85
3929 12757 6.265196 GCATTTACATATGGGGATCAGTTTCA 59.735 38.462 7.80 0.00 0.00 2.69
4050 12878 0.250597 ACCCCAAGTAAGGCGTCAAC 60.251 55.000 0.00 0.00 0.00 3.18
4071 12899 3.304659 GGTTATTCACCACAGCTGTGTTG 60.305 47.826 37.55 34.82 46.42 3.33
4115 12943 6.549364 TCAAAACAATTAGATGGAACCACTGT 59.451 34.615 0.00 0.00 0.00 3.55
4158 12986 4.040952 ACATGCTAGGATGGATGAGTTACC 59.959 45.833 25.75 0.00 38.79 2.85
4167 12995 7.678171 TGGAATAATAGTACATGCTAGGATGGA 59.322 37.037 25.75 16.95 0.00 3.41
4269 13097 9.793259 TTTGTGATCTTACTTTAGGATTTCTGT 57.207 29.630 0.00 0.00 0.00 3.41
4362 13191 6.716173 TGTTCCTTCACAATCTGAATCAATCA 59.284 34.615 0.00 0.00 38.26 2.57
4371 13200 7.482743 CGTGAAATTATGTTCCTTCACAATCTG 59.517 37.037 12.68 0.00 45.09 2.90
4384 13213 6.317642 TCCCAATTCGATCGTGAAATTATGTT 59.682 34.615 15.94 0.00 0.00 2.71
4392 13221 4.137116 AGAATCCCAATTCGATCGTGAA 57.863 40.909 15.94 3.04 45.01 3.18
4556 13390 9.236691 GGCAATACAAATATAATTGTGTCACAG 57.763 33.333 15.09 3.23 43.13 3.66
4632 13466 7.070447 AGAGAAGAGCTCATTTACCACATCATA 59.930 37.037 17.77 0.00 46.45 2.15
4703 13537 3.969899 CTCCAAAAGAGCAGGTGTTTTC 58.030 45.455 4.55 0.00 35.31 2.29
4775 13609 7.667043 AGATATTGTTTGTACGTCACATGTT 57.333 32.000 0.00 0.00 36.90 2.71
4784 13618 8.813282 TGTATTGCAGTAGATATTGTTTGTACG 58.187 33.333 0.00 0.00 0.00 3.67
4824 13658 1.824230 AGCCTGCAACTTTTGTGAACA 59.176 42.857 0.00 0.00 0.00 3.18
4841 13675 3.007290 AGGAAGCTTGAAAATTGGAAGCC 59.993 43.478 2.10 0.00 42.59 4.35
4894 13728 7.715657 AGACAAAAATTACATGAGTCAAAGCA 58.284 30.769 0.00 0.00 0.00 3.91
5014 13854 2.342910 TTGAAGTAGAAGTCGACGGC 57.657 50.000 10.46 6.24 0.00 5.68
5033 13873 4.099266 AGTGTAACAATGGTTGTGTGCATT 59.901 37.500 0.00 0.00 44.59 3.56
5342 14184 9.761504 CATTTTATCTCTATCTTGCTCTTCAGA 57.238 33.333 0.00 0.00 0.00 3.27
5430 14272 2.616842 CACACACCCTTTCACTTACCAC 59.383 50.000 0.00 0.00 0.00 4.16
5497 14339 5.007682 TGCTTCAACTTACTTTATGGGACC 58.992 41.667 0.00 0.00 0.00 4.46
5575 14419 7.107542 GGACATCTACTTTGGTTACCATTACA 58.892 38.462 4.38 0.00 31.53 2.41
5630 14474 6.500589 TCTTATATTTTGGGACAGAGGGAG 57.499 41.667 0.00 0.00 42.39 4.30
5631 14475 6.631766 CGTTCTTATATTTTGGGACAGAGGGA 60.632 42.308 0.00 0.00 42.39 4.20
5632 14476 5.527582 CGTTCTTATATTTTGGGACAGAGGG 59.472 44.000 0.00 0.00 42.39 4.30
5633 14477 6.113411 ACGTTCTTATATTTTGGGACAGAGG 58.887 40.000 0.00 0.00 42.39 3.69
5634 14478 7.611213 AACGTTCTTATATTTTGGGACAGAG 57.389 36.000 0.00 0.00 42.39 3.35
5635 14479 7.989416 AAACGTTCTTATATTTTGGGACAGA 57.011 32.000 0.00 0.00 42.39 3.41
5636 14480 8.911662 CAAAAACGTTCTTATATTTTGGGACAG 58.088 33.333 0.00 0.00 42.39 3.51
5637 14481 8.630917 TCAAAAACGTTCTTATATTTTGGGACA 58.369 29.630 15.53 0.00 39.94 4.02
5638 14482 8.908678 GTCAAAAACGTTCTTATATTTTGGGAC 58.091 33.333 15.53 7.20 39.94 4.46
5639 14483 8.630917 TGTCAAAAACGTTCTTATATTTTGGGA 58.369 29.630 15.53 4.35 39.94 4.37
5640 14484 8.696175 GTGTCAAAAACGTTCTTATATTTTGGG 58.304 33.333 15.53 0.00 39.94 4.12
5641 14485 9.458374 AGTGTCAAAAACGTTCTTATATTTTGG 57.542 29.630 15.53 0.00 39.94 3.28
5646 14490 9.485206 AGTGTAGTGTCAAAAACGTTCTTATAT 57.515 29.630 0.00 0.00 0.00 0.86
5647 14491 8.876275 AGTGTAGTGTCAAAAACGTTCTTATA 57.124 30.769 0.00 0.00 0.00 0.98
5648 14492 7.781548 AGTGTAGTGTCAAAAACGTTCTTAT 57.218 32.000 0.00 0.00 0.00 1.73
5649 14493 7.975616 ACTAGTGTAGTGTCAAAAACGTTCTTA 59.024 33.333 0.00 0.00 37.69 2.10
5650 14494 6.815142 ACTAGTGTAGTGTCAAAAACGTTCTT 59.185 34.615 0.00 0.00 37.69 2.52
5651 14495 6.335777 ACTAGTGTAGTGTCAAAAACGTTCT 58.664 36.000 0.00 0.00 37.69 3.01
5652 14496 6.579491 ACTAGTGTAGTGTCAAAAACGTTC 57.421 37.500 0.00 0.00 37.69 3.95
5665 14509 6.335777 AGAACGTTTTTGACACTAGTGTAGT 58.664 36.000 27.98 15.35 45.05 2.73
5666 14510 6.823678 AGAACGTTTTTGACACTAGTGTAG 57.176 37.500 27.98 14.79 45.05 2.74
5667 14511 8.876275 ATAAGAACGTTTTTGACACTAGTGTA 57.124 30.769 27.98 11.50 45.05 2.90
5673 14517 8.073768 CCACAATATAAGAACGTTTTTGACACT 58.926 33.333 13.87 0.00 0.00 3.55
5674 14518 7.325097 CCCACAATATAAGAACGTTTTTGACAC 59.675 37.037 13.87 0.00 0.00 3.67
5675 14519 7.228906 TCCCACAATATAAGAACGTTTTTGACA 59.771 33.333 13.87 0.01 0.00 3.58
5676 14520 7.536281 GTCCCACAATATAAGAACGTTTTTGAC 59.464 37.037 13.87 5.89 0.00 3.18
5677 14521 7.571613 CGTCCCACAATATAAGAACGTTTTTGA 60.572 37.037 13.87 2.81 0.00 2.69
5678 14522 6.521821 CGTCCCACAATATAAGAACGTTTTTG 59.478 38.462 13.87 8.38 0.00 2.44
5679 14523 6.348704 CCGTCCCACAATATAAGAACGTTTTT 60.349 38.462 9.22 9.22 0.00 1.94
5680 14524 5.122711 CCGTCCCACAATATAAGAACGTTTT 59.877 40.000 0.46 0.00 0.00 2.43
5681 14525 4.632688 CCGTCCCACAATATAAGAACGTTT 59.367 41.667 0.46 0.00 0.00 3.60
5682 14526 4.081531 TCCGTCCCACAATATAAGAACGTT 60.082 41.667 0.00 0.00 0.00 3.99
5683 14527 3.448301 TCCGTCCCACAATATAAGAACGT 59.552 43.478 0.00 0.00 0.00 3.99
5684 14528 4.049186 CTCCGTCCCACAATATAAGAACG 58.951 47.826 0.00 0.00 0.00 3.95
5685 14529 4.100498 TCCTCCGTCCCACAATATAAGAAC 59.900 45.833 0.00 0.00 0.00 3.01
5686 14530 4.291792 TCCTCCGTCCCACAATATAAGAA 58.708 43.478 0.00 0.00 0.00 2.52
5687 14531 3.918566 TCCTCCGTCCCACAATATAAGA 58.081 45.455 0.00 0.00 0.00 2.10
5688 14532 4.101119 ACTTCCTCCGTCCCACAATATAAG 59.899 45.833 0.00 0.00 0.00 1.73
5689 14533 4.035112 ACTTCCTCCGTCCCACAATATAA 58.965 43.478 0.00 0.00 0.00 0.98
5690 14534 3.649843 ACTTCCTCCGTCCCACAATATA 58.350 45.455 0.00 0.00 0.00 0.86
5691 14535 2.478292 ACTTCCTCCGTCCCACAATAT 58.522 47.619 0.00 0.00 0.00 1.28
5692 14536 1.946984 ACTTCCTCCGTCCCACAATA 58.053 50.000 0.00 0.00 0.00 1.90
5693 14537 1.553704 GTACTTCCTCCGTCCCACAAT 59.446 52.381 0.00 0.00 0.00 2.71
5694 14538 0.971386 GTACTTCCTCCGTCCCACAA 59.029 55.000 0.00 0.00 0.00 3.33
5695 14539 0.113776 AGTACTTCCTCCGTCCCACA 59.886 55.000 0.00 0.00 0.00 4.17
5696 14540 2.134789 TAGTACTTCCTCCGTCCCAC 57.865 55.000 0.00 0.00 0.00 4.61
5697 14541 3.393426 AATAGTACTTCCTCCGTCCCA 57.607 47.619 0.00 0.00 0.00 4.37
5698 14542 5.859205 TTAAATAGTACTTCCTCCGTCCC 57.141 43.478 0.00 0.00 0.00 4.46
5699 14543 7.724287 AGAATTAAATAGTACTTCCTCCGTCC 58.276 38.462 0.00 0.00 0.00 4.79
5700 14544 8.411683 TGAGAATTAAATAGTACTTCCTCCGTC 58.588 37.037 0.00 0.00 0.00 4.79
5701 14545 8.302515 TGAGAATTAAATAGTACTTCCTCCGT 57.697 34.615 0.00 0.00 0.00 4.69
5702 14546 9.032420 GTTGAGAATTAAATAGTACTTCCTCCG 57.968 37.037 0.00 0.00 0.00 4.63
5917 14978 6.808829 TGCTTTGGTAATGATCATTTCATCC 58.191 36.000 25.26 20.23 44.51 3.51
5925 14986 9.752961 CATTCATTATTGCTTTGGTAATGATCA 57.247 29.630 0.00 0.00 41.68 2.92
5926 14987 9.970395 TCATTCATTATTGCTTTGGTAATGATC 57.030 29.630 7.59 0.00 41.68 2.92
6064 15128 6.144080 GTGGACGTATGTGATTTGTATCTAGC 59.856 42.308 0.00 0.00 0.00 3.42
6077 15141 1.872234 CGAGCGGTGGACGTATGTG 60.872 63.158 0.00 0.00 46.52 3.21
6099 15163 1.317613 GTGTCATTGTGCTTGGTGGA 58.682 50.000 0.00 0.00 0.00 4.02
6112 15176 4.119862 GTCGGCATACATTAGTGTGTCAT 58.880 43.478 0.34 0.00 40.98 3.06
6135 15199 4.399004 TGACATGGTGGGAAACTTTTTG 57.601 40.909 0.00 0.00 0.00 2.44
6172 15237 1.474077 GATTTGGCTCGCTTGTTGGAT 59.526 47.619 0.00 0.00 0.00 3.41
6208 15273 0.621862 GGGGTCTTCATCTCCACCCT 60.622 60.000 5.97 0.00 46.96 4.34
6226 15291 2.808543 GTGCTTCCTAAAGGCATATCGG 59.191 50.000 0.00 0.00 32.79 4.18
6252 15319 1.347378 GGTGGGGCATGATGTTTTGTT 59.653 47.619 0.00 0.00 0.00 2.83
6410 15477 0.328258 CCGGGGATGAGTTGGTCTTT 59.672 55.000 0.00 0.00 0.00 2.52
6412 15479 1.995626 CCCGGGGATGAGTTGGTCT 60.996 63.158 14.71 0.00 0.00 3.85
6427 15494 0.882042 CGAGATGATTGGAAGCCCCG 60.882 60.000 0.00 0.00 37.93 5.73
6461 15528 2.092914 GGATAGGTACATAGGGCATGGC 60.093 54.545 11.56 11.56 39.13 4.40
6541 15614 0.176680 AGACTACGAGGCAAGCATGG 59.823 55.000 0.00 0.00 0.00 3.66
6543 15616 3.639094 AGATTAGACTACGAGGCAAGCAT 59.361 43.478 0.00 0.00 0.00 3.79
6544 15617 3.024547 AGATTAGACTACGAGGCAAGCA 58.975 45.455 0.00 0.00 0.00 3.91
6545 15618 3.719173 AGATTAGACTACGAGGCAAGC 57.281 47.619 0.00 0.00 0.00 4.01
6557 15631 7.493743 TTAGTCGGTGACAGATAGATTAGAC 57.506 40.000 0.00 0.00 34.60 2.59
6563 15637 6.430308 GGATGTATTAGTCGGTGACAGATAGA 59.570 42.308 0.00 0.00 34.60 1.98
6581 15655 2.346803 GTGTGTTGCTCGTGGATGTAT 58.653 47.619 0.00 0.00 0.00 2.29
6616 15691 1.305213 ATGGATGTTGGGGTGGTGC 60.305 57.895 0.00 0.00 0.00 5.01
6617 15692 1.606885 GCATGGATGTTGGGGTGGTG 61.607 60.000 0.00 0.00 0.00 4.17
6618 15693 1.305213 GCATGGATGTTGGGGTGGT 60.305 57.895 0.00 0.00 0.00 4.16
6619 15694 0.903924 TTGCATGGATGTTGGGGTGG 60.904 55.000 0.00 0.00 0.00 4.61
6698 15773 8.695456 ACTGATTTTTCTATTGTTGGAGTGTTT 58.305 29.630 0.00 0.00 0.00 2.83
6715 15790 4.917906 AGAGGTGGAGCTACTGATTTTT 57.082 40.909 0.00 0.00 0.00 1.94
6720 15795 4.017808 GTTCTAAGAGGTGGAGCTACTGA 58.982 47.826 0.00 0.00 0.00 3.41
6751 15826 0.744874 CGAGAACTCCATAAGGCGGA 59.255 55.000 0.00 0.00 33.74 5.54
6771 15846 3.404899 GAATTGTACCCACACTTCGGAA 58.595 45.455 0.00 0.00 35.45 4.30
6775 15850 4.215613 GTGAAGGAATTGTACCCACACTTC 59.784 45.833 8.77 8.77 41.32 3.01
6777 15852 3.497942 GGTGAAGGAATTGTACCCACACT 60.498 47.826 0.00 0.00 35.77 3.55
6831 15906 0.248498 CATGTCACGACGCGGTAGAT 60.248 55.000 12.47 0.00 0.00 1.98
6841 15916 1.819288 GGTCTTCCTCTCATGTCACGA 59.181 52.381 0.00 0.00 0.00 4.35
7251 16350 7.328277 TGGTCATCCAAAGGATATTTTAACG 57.672 36.000 0.00 0.00 40.98 3.18
7547 16646 3.770388 GACCTGAGAGTATATAAGCCCCC 59.230 52.174 0.00 0.00 0.00 5.40
7548 16647 4.679331 AGACCTGAGAGTATATAAGCCCC 58.321 47.826 0.00 0.00 0.00 5.80
7549 16648 5.354792 CGTAGACCTGAGAGTATATAAGCCC 59.645 48.000 0.00 0.00 0.00 5.19
7550 16649 5.354792 CCGTAGACCTGAGAGTATATAAGCC 59.645 48.000 0.00 0.00 0.00 4.35
7551 16650 5.163733 GCCGTAGACCTGAGAGTATATAAGC 60.164 48.000 0.00 0.00 0.00 3.09
7552 16651 6.174760 AGCCGTAGACCTGAGAGTATATAAG 58.825 44.000 0.00 0.00 0.00 1.73
7553 16652 6.124316 AGCCGTAGACCTGAGAGTATATAA 57.876 41.667 0.00 0.00 0.00 0.98
7554 16653 5.758790 AGCCGTAGACCTGAGAGTATATA 57.241 43.478 0.00 0.00 0.00 0.86
7555 16654 4.644163 AGCCGTAGACCTGAGAGTATAT 57.356 45.455 0.00 0.00 0.00 0.86
7556 16655 5.557576 TTAGCCGTAGACCTGAGAGTATA 57.442 43.478 0.00 0.00 0.00 1.47
7557 16656 4.434545 TTAGCCGTAGACCTGAGAGTAT 57.565 45.455 0.00 0.00 0.00 2.12
7558 16657 3.920231 TTAGCCGTAGACCTGAGAGTA 57.080 47.619 0.00 0.00 0.00 2.59
7559 16658 2.803030 TTAGCCGTAGACCTGAGAGT 57.197 50.000 0.00 0.00 0.00 3.24
7560 16659 4.142138 ACATTTTAGCCGTAGACCTGAGAG 60.142 45.833 0.00 0.00 0.00 3.20
7561 16660 3.767673 ACATTTTAGCCGTAGACCTGAGA 59.232 43.478 0.00 0.00 0.00 3.27
7562 16661 4.124851 ACATTTTAGCCGTAGACCTGAG 57.875 45.455 0.00 0.00 0.00 3.35
7563 16662 4.708421 ACTACATTTTAGCCGTAGACCTGA 59.292 41.667 0.00 0.00 36.84 3.86
7564 16663 4.804139 CACTACATTTTAGCCGTAGACCTG 59.196 45.833 0.00 0.00 36.84 4.00
7565 16664 4.708421 TCACTACATTTTAGCCGTAGACCT 59.292 41.667 0.00 0.00 36.84 3.85
7566 16665 5.002464 TCACTACATTTTAGCCGTAGACC 57.998 43.478 0.00 0.00 36.84 3.85
7567 16666 8.813643 ATTATCACTACATTTTAGCCGTAGAC 57.186 34.615 0.00 0.00 36.84 2.59
7568 16667 9.472361 GAATTATCACTACATTTTAGCCGTAGA 57.528 33.333 0.00 0.00 36.84 2.59
7569 16668 8.709646 GGAATTATCACTACATTTTAGCCGTAG 58.290 37.037 0.00 0.00 38.83 3.51
7570 16669 8.205512 TGGAATTATCACTACATTTTAGCCGTA 58.794 33.333 0.00 0.00 0.00 4.02
7571 16670 7.051623 TGGAATTATCACTACATTTTAGCCGT 58.948 34.615 0.00 0.00 0.00 5.68
7572 16671 7.490962 TGGAATTATCACTACATTTTAGCCG 57.509 36.000 0.00 0.00 0.00 5.52
7607 16706 9.143155 AGACCCCGCAAAATAAAATAATCTATT 57.857 29.630 0.00 0.00 0.00 1.73
7608 16707 8.706322 AGACCCCGCAAAATAAAATAATCTAT 57.294 30.769 0.00 0.00 0.00 1.98
7609 16708 9.059260 GTAGACCCCGCAAAATAAAATAATCTA 57.941 33.333 0.00 0.00 0.00 1.98
7610 16709 7.013942 GGTAGACCCCGCAAAATAAAATAATCT 59.986 37.037 0.00 0.00 0.00 2.40
7611 16710 7.013942 AGGTAGACCCCGCAAAATAAAATAATC 59.986 37.037 0.00 0.00 36.42 1.75
7612 16711 6.837048 AGGTAGACCCCGCAAAATAAAATAAT 59.163 34.615 0.00 0.00 36.42 1.28
7613 16712 6.189133 AGGTAGACCCCGCAAAATAAAATAA 58.811 36.000 0.00 0.00 36.42 1.40
7614 16713 5.757988 AGGTAGACCCCGCAAAATAAAATA 58.242 37.500 0.00 0.00 36.42 1.40
7615 16714 4.606210 AGGTAGACCCCGCAAAATAAAAT 58.394 39.130 0.00 0.00 36.42 1.82
7616 16715 4.011698 GAGGTAGACCCCGCAAAATAAAA 58.988 43.478 0.00 0.00 36.42 1.52
7620 16888 0.988832 TGAGGTAGACCCCGCAAAAT 59.011 50.000 0.00 0.00 36.42 1.82
7621 16889 0.323629 CTGAGGTAGACCCCGCAAAA 59.676 55.000 0.00 0.00 33.69 2.44
7626 16894 0.818296 CAACTCTGAGGTAGACCCCG 59.182 60.000 9.85 0.00 36.42 5.73
7628 16896 2.233305 TCCAACTCTGAGGTAGACCC 57.767 55.000 9.85 0.00 36.42 4.46
7636 16904 6.727824 ACATTAATTCGTTCCAACTCTGAG 57.272 37.500 2.45 2.45 0.00 3.35
7809 17104 0.844661 TTATCCCTGGGCCACACTGT 60.845 55.000 8.22 0.00 0.00 3.55
7969 17336 2.596346 TGTCATTGTTCCAGTTGGCAT 58.404 42.857 0.00 0.00 34.44 4.40
8172 17539 0.602638 CGCTGCCCTGAAGTACACAA 60.603 55.000 0.00 0.00 0.00 3.33
8188 17555 1.603236 CTCCTTCAGTGGAGCTCGCT 61.603 60.000 7.83 5.60 45.84 4.93
8214 17581 6.645003 GTGCCCAAAAAGTATTTCCAGTTAAG 59.355 38.462 0.00 0.00 37.28 1.85
8252 17625 2.038863 TGGACATGGAGGTAGGTTGT 57.961 50.000 0.00 0.00 0.00 3.32
8282 17655 9.537192 TTTCCAAAGTTACTATACATGATACCG 57.463 33.333 0.00 0.00 0.00 4.02
8302 17675 1.533731 GATTGTCGAAGCGGTTTCCAA 59.466 47.619 0.00 5.58 31.82 3.53
8311 17684 3.433274 TGAACTGATGTGATTGTCGAAGC 59.567 43.478 0.00 0.00 0.00 3.86
8329 17702 4.878397 CACTGGGAGATAAGTTCCATGAAC 59.122 45.833 0.00 0.00 42.25 3.18
8424 17797 5.598416 AGTGTCATTGTCTCCGATGATAA 57.402 39.130 0.00 0.00 42.22 1.75
8442 17815 1.248486 TCTCGTAGCTGCTCAAGTGT 58.752 50.000 4.91 0.00 0.00 3.55
8459 17832 4.748102 TCGTTGTCGCTCAATAAGTTTTCT 59.252 37.500 0.00 0.00 38.38 2.52
8468 17841 1.550065 CGATCTCGTTGTCGCTCAAT 58.450 50.000 0.00 0.00 38.38 2.57
8484 17857 0.606096 TCGTCCACCACATTCACGAT 59.394 50.000 0.00 0.00 34.68 3.73
8534 17908 4.453480 ACTCTTCCCAATCAAACAGGAA 57.547 40.909 0.00 0.00 36.91 3.36
8550 17924 1.492993 GCCTGGGAGTGGGAACTCTT 61.493 60.000 5.89 0.00 36.97 2.85
8572 17946 2.103263 GGAGGAGCGACCAGATTATTGT 59.897 50.000 5.84 0.00 42.04 2.71
8578 17952 1.456705 GGAGGAGGAGCGACCAGAT 60.457 63.158 5.84 0.00 42.04 2.90
8630 18004 1.992277 GCTGCTTCCAGGAGGAGGA 60.992 63.158 1.81 0.00 46.74 3.71
8659 18033 4.767255 GTGAGCCTGGCCACTCCG 62.767 72.222 24.18 1.91 37.80 4.63
8663 18037 2.753043 CATGGTGAGCCTGGCCAC 60.753 66.667 23.71 23.71 34.84 5.01
8690 18064 5.779529 AATAATGTTCATGTGCCTCCATC 57.220 39.130 0.00 0.00 0.00 3.51
8691 18065 7.844493 AATAATAATGTTCATGTGCCTCCAT 57.156 32.000 0.00 0.00 0.00 3.41
8703 18077 8.682710 ACCCACACACACATAATAATAATGTTC 58.317 33.333 0.00 0.00 35.39 3.18
8757 18131 5.502079 ACATTACAATAACCATCGGTCCAA 58.498 37.500 0.00 0.00 33.12 3.53
8763 18137 5.959652 TGTCGACATTACAATAACCATCG 57.040 39.130 15.76 0.00 0.00 3.84
8780 18162 6.184580 ACACAAAGTAAAACAACATGTCGA 57.815 33.333 0.00 0.00 0.00 4.20
8810 18192 2.416972 GGTCCACACGGAAGTCTATCAC 60.417 54.545 0.00 0.00 45.20 3.06
8816 18198 3.698040 TCTTATAGGTCCACACGGAAGTC 59.302 47.826 0.00 0.00 45.20 3.01
8822 18204 2.758979 ACCACTCTTATAGGTCCACACG 59.241 50.000 0.00 0.00 0.00 4.49
8834 18216 6.543465 CCATGAAAGCATTATCACCACTCTTA 59.457 38.462 0.00 0.00 30.68 2.10
8837 18219 4.037208 CCCATGAAAGCATTATCACCACTC 59.963 45.833 0.00 0.00 30.68 3.51
8838 18220 3.956199 CCCATGAAAGCATTATCACCACT 59.044 43.478 0.00 0.00 30.68 4.00
8839 18221 3.953612 TCCCATGAAAGCATTATCACCAC 59.046 43.478 0.00 0.00 30.68 4.16
8840 18222 3.953612 GTCCCATGAAAGCATTATCACCA 59.046 43.478 0.00 0.00 30.68 4.17
8841 18223 3.319122 GGTCCCATGAAAGCATTATCACC 59.681 47.826 0.00 0.00 30.68 4.02
8869 18251 7.954788 TTGTGATTAAAACATAAGTTTGGGC 57.045 32.000 0.00 0.00 46.79 5.36
8930 18312 9.295825 TCAGGTTTATGTCAACACTATGATTTT 57.704 29.630 0.00 0.00 0.00 1.82
9047 18467 9.760660 GATAAGATGTAGTTGTTGATTGTTGTC 57.239 33.333 0.00 0.00 0.00 3.18
9085 18505 2.096819 GGAACGCAGTGTCAAACTTTGA 59.903 45.455 0.00 0.00 45.00 2.69
9102 18522 5.405269 CCAACATTCTTTTCGATTTGGGAAC 59.595 40.000 0.00 0.00 0.00 3.62
9146 18566 4.426704 AGTCTAGCTTTTCCTTGGACCTA 58.573 43.478 0.00 0.00 0.00 3.08
9170 18590 7.079451 TCCTTGGTCTCTATTTCTCAAGTTT 57.921 36.000 0.00 0.00 32.28 2.66
9179 18599 3.054065 CCTTGCCTCCTTGGTCTCTATTT 60.054 47.826 0.00 0.00 38.35 1.40
9190 18610 0.622665 CCTCATGTCCTTGCCTCCTT 59.377 55.000 0.00 0.00 0.00 3.36
9197 18617 2.486472 ACTTCTGCCTCATGTCCTTG 57.514 50.000 0.00 0.00 0.00 3.61
9241 18661 1.963515 ACATGTTTCTCCCTTGCAACC 59.036 47.619 0.00 0.00 0.00 3.77
9242 18662 3.191371 CCTACATGTTTCTCCCTTGCAAC 59.809 47.826 2.30 0.00 0.00 4.17
9266 18686 4.272504 CGTCTCCGTATGGCAATATGTTTT 59.727 41.667 0.00 0.00 34.14 2.43
9332 18752 7.611467 TGTATCCAACTGATGCTTCATTTTAGT 59.389 33.333 2.33 0.00 37.04 2.24
9346 18766 6.951062 TTCATTGTGTTTGTATCCAACTGA 57.049 33.333 0.00 0.00 0.00 3.41
9347 18767 8.296000 TGTATTCATTGTGTTTGTATCCAACTG 58.704 33.333 0.00 0.00 0.00 3.16
9348 18768 8.296713 GTGTATTCATTGTGTTTGTATCCAACT 58.703 33.333 0.00 0.00 0.00 3.16
9349 18769 7.270365 CGTGTATTCATTGTGTTTGTATCCAAC 59.730 37.037 0.00 0.00 0.00 3.77
9350 18770 7.301789 CGTGTATTCATTGTGTTTGTATCCAA 58.698 34.615 0.00 0.00 0.00 3.53
9351 18771 6.621812 GCGTGTATTCATTGTGTTTGTATCCA 60.622 38.462 0.00 0.00 0.00 3.41
9352 18772 5.737290 GCGTGTATTCATTGTGTTTGTATCC 59.263 40.000 0.00 0.00 0.00 2.59
9353 18773 6.542852 AGCGTGTATTCATTGTGTTTGTATC 58.457 36.000 0.00 0.00 0.00 2.24
9369 18789 2.027605 CGATGGCCGAGCGTGTAT 59.972 61.111 0.00 0.00 41.76 2.29
9380 18800 0.520404 CATTCTGGCTATGCGATGGC 59.480 55.000 0.00 0.00 40.52 4.40
9383 18803 2.874701 GTGTTCATTCTGGCTATGCGAT 59.125 45.455 0.00 0.00 0.00 4.58
9385 18805 2.009051 TGTGTTCATTCTGGCTATGCG 58.991 47.619 0.00 0.00 0.00 4.73
9393 18813 5.204833 CCGTTACTTGTTGTGTTCATTCTG 58.795 41.667 0.00 0.00 0.00 3.02
9407 18827 1.964373 AACCTGGCGCCGTTACTTG 60.964 57.895 23.90 7.00 0.00 3.16
9408 18828 1.964373 CAACCTGGCGCCGTTACTT 60.964 57.895 23.90 5.35 0.00 2.24
9409 18829 2.358247 CAACCTGGCGCCGTTACT 60.358 61.111 23.90 1.39 0.00 2.24
9410 18830 3.428282 CCAACCTGGCGCCGTTAC 61.428 66.667 23.90 0.00 0.00 2.50
9421 18841 4.265056 GGGGCGTGACACCAACCT 62.265 66.667 0.00 0.00 0.00 3.50
9431 18851 0.171007 CACTATTTGCTTGGGGCGTG 59.829 55.000 0.00 0.00 45.43 5.34
9433 18853 1.745232 TACACTATTTGCTTGGGGCG 58.255 50.000 0.00 0.00 45.43 6.13
9440 18860 3.187227 GCGCTATGCATACACTATTTGCT 59.813 43.478 1.16 0.00 45.45 3.91
9455 18875 1.131771 CGACTGTGTATGGCGCTATG 58.868 55.000 17.43 1.15 0.00 2.23
9457 18877 0.528924 AACGACTGTGTATGGCGCTA 59.471 50.000 7.64 0.00 0.00 4.26
9460 18880 1.652124 GTACAACGACTGTGTATGGCG 59.348 52.381 5.36 0.00 39.20 5.69
9473 18894 5.526111 CCCTTCATTGGTTATAGGTACAACG 59.474 44.000 0.00 0.00 0.00 4.10
9475 18896 6.215841 TGACCCTTCATTGGTTATAGGTACAA 59.784 38.462 0.00 0.00 35.85 2.41
9510 18931 2.529136 CCCACACAGTCCTGGGGA 60.529 66.667 1.02 0.00 43.32 4.81
9515 18936 3.252284 CAGGCCCCACACAGTCCT 61.252 66.667 0.00 0.00 0.00 3.85
9563 18984 3.842126 CATGCGTGTGTCCGAGCG 61.842 66.667 0.00 0.00 0.00 5.03
9564 18985 4.152625 GCATGCGTGTGTCCGAGC 62.153 66.667 0.00 0.00 0.00 5.03
9565 18986 2.738139 TGCATGCGTGTGTCCGAG 60.738 61.111 14.09 0.00 0.00 4.63
9566 18987 3.041351 GTGCATGCGTGTGTCCGA 61.041 61.111 14.09 0.00 0.00 4.55
9569 18990 0.795698 TGTATGTGCATGCGTGTGTC 59.204 50.000 14.09 2.59 0.00 3.67
9570 18991 0.516877 GTGTATGTGCATGCGTGTGT 59.483 50.000 14.09 0.00 0.00 3.72
9579 19000 1.587547 TTTGTCTGCGTGTATGTGCA 58.412 45.000 0.00 0.00 39.13 4.57
9585 19006 3.803231 ACGTGTTTATTTGTCTGCGTGTA 59.197 39.130 0.00 0.00 0.00 2.90
9590 19011 2.834689 CCGACGTGTTTATTTGTCTGC 58.165 47.619 0.00 0.00 0.00 4.26
9593 19014 2.953640 TGCCGACGTGTTTATTTGTC 57.046 45.000 0.00 0.00 0.00 3.18
9597 19018 4.373527 TGCTATATGCCGACGTGTTTATT 58.626 39.130 0.00 0.00 42.00 1.40
9599 19020 3.439895 TGCTATATGCCGACGTGTTTA 57.560 42.857 0.00 0.00 42.00 2.01
9601 19022 2.303163 TTGCTATATGCCGACGTGTT 57.697 45.000 0.00 0.00 42.00 3.32
9603 19024 2.201732 ACTTTGCTATATGCCGACGTG 58.798 47.619 0.00 0.00 42.00 4.49
9606 19027 4.627467 CCTATGACTTTGCTATATGCCGAC 59.373 45.833 0.00 0.00 42.00 4.79
9607 19028 4.526650 TCCTATGACTTTGCTATATGCCGA 59.473 41.667 0.00 0.00 42.00 5.54
9608 19029 4.627467 GTCCTATGACTTTGCTATATGCCG 59.373 45.833 0.00 0.00 38.55 5.69
9609 19030 5.551233 TGTCCTATGACTTTGCTATATGCC 58.449 41.667 0.00 0.00 42.28 4.40
9610 19031 6.459066 TCTGTCCTATGACTTTGCTATATGC 58.541 40.000 0.00 0.00 42.28 3.14
9611 19032 7.117523 GCTTCTGTCCTATGACTTTGCTATATG 59.882 40.741 0.00 0.00 42.28 1.78
9612 19033 7.158021 GCTTCTGTCCTATGACTTTGCTATAT 58.842 38.462 0.00 0.00 42.28 0.86
9613 19034 6.516718 GCTTCTGTCCTATGACTTTGCTATA 58.483 40.000 0.00 0.00 42.28 1.31
9617 19040 2.349886 CGCTTCTGTCCTATGACTTTGC 59.650 50.000 0.00 0.00 42.28 3.68
9622 19045 2.131183 GCATCGCTTCTGTCCTATGAC 58.869 52.381 0.00 0.00 42.12 3.06
9628 19051 1.576356 CTTAGGCATCGCTTCTGTCC 58.424 55.000 0.00 0.00 0.00 4.02
9632 19055 1.884926 GCGCTTAGGCATCGCTTCT 60.885 57.895 0.00 0.00 44.79 2.85
9633 19056 2.628657 GCGCTTAGGCATCGCTTC 59.371 61.111 0.00 0.00 44.79 3.86
9638 19061 3.988459 TTTTTCGCGCTTAGGCATC 57.012 47.368 5.56 0.00 38.60 3.91


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.