Multiple sequence alignment - TraesCS4A01G366300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G366300 chr4A 100.000 9837 0 0 1 9837 639375010 639384846 0.000000e+00 18166.0
1 TraesCS4A01G366300 chr4A 93.269 2585 136 20 4304 6856 639588647 639591225 0.000000e+00 3775.0
2 TraesCS4A01G366300 chr4A 96.195 2234 55 11 7243 9460 639238846 639241065 0.000000e+00 3627.0
3 TraesCS4A01G366300 chr4A 95.380 1645 56 8 6895 8534 639591229 639592858 0.000000e+00 2599.0
4 TraesCS4A01G366300 chr4A 96.216 1295 46 3 4314 5607 639233328 639234620 0.000000e+00 2117.0
5 TraesCS4A01G366300 chr4A 98.178 988 18 0 6265 7252 639236180 639237167 0.000000e+00 1725.0
6 TraesCS4A01G366300 chr4A 95.138 1049 50 1 8789 9837 639391621 639392668 0.000000e+00 1653.0
7 TraesCS4A01G366300 chr4A 91.234 1175 71 16 8638 9784 639592855 639594025 0.000000e+00 1570.0
8 TraesCS4A01G366300 chr4A 90.669 643 30 10 5656 6270 639234619 639235259 0.000000e+00 828.0
9 TraesCS4A01G366300 chr4A 86.819 698 76 6 6386 7075 3870876 3871565 0.000000e+00 765.0
10 TraesCS4A01G366300 chr4A 88.612 562 52 7 7674 8231 3872297 3872850 0.000000e+00 673.0
11 TraesCS4A01G366300 chr4A 86.070 603 52 11 7071 7660 3871650 3872233 3.900000e-173 619.0
12 TraesCS4A01G366300 chr4A 97.472 356 5 2 3926 4281 639232979 639233330 1.090000e-168 604.0
13 TraesCS4A01G366300 chr4A 75.468 1390 249 52 1047 2372 637171066 637169705 2.370000e-165 593.0
14 TraesCS4A01G366300 chr4A 76.971 1116 195 38 1042 2127 637200939 637199856 1.840000e-161 580.0
15 TraesCS4A01G366300 chr4A 94.444 342 13 2 3620 3960 639588312 639588648 1.130000e-143 521.0
16 TraesCS4A01G366300 chr4A 84.418 507 54 12 4731 5217 3870377 3870878 8.940000e-130 475.0
17 TraesCS4A01G366300 chr4A 90.411 365 21 3 9465 9829 639241113 639241463 1.500000e-127 468.0
18 TraesCS4A01G366300 chr4A 81.048 496 76 10 1048 1528 639956137 639956629 7.210000e-101 379.0
19 TraesCS4A01G366300 chr4A 82.833 233 27 10 8383 8609 639988984 639989209 7.790000e-46 196.0
20 TraesCS4A01G366300 chr5B 90.769 2730 176 28 847 3532 672474861 672472164 0.000000e+00 3576.0
21 TraesCS4A01G366300 chr5B 90.761 2706 172 27 847 3508 672441829 672439158 0.000000e+00 3541.0
22 TraesCS4A01G366300 chr5B 88.200 2000 168 30 3529 5508 672472115 672470164 0.000000e+00 2324.0
23 TraesCS4A01G366300 chr5B 90.683 966 67 12 3529 4483 672439004 672438051 0.000000e+00 1264.0
24 TraesCS4A01G366300 chr5B 89.494 771 58 13 8693 9452 672434131 672433373 0.000000e+00 953.0
25 TraesCS4A01G366300 chr5B 89.105 771 61 12 8693 9452 672467546 672466788 0.000000e+00 937.0
26 TraesCS4A01G366300 chr5B 89.326 712 67 6 6371 7075 672469884 672469175 0.000000e+00 885.0
27 TraesCS4A01G366300 chr5B 90.625 416 34 2 7071 7486 672469097 672468687 1.870000e-151 547.0
28 TraesCS4A01G366300 chr5B 80.326 737 128 9 1041 1764 676094453 676093721 8.690000e-150 542.0
29 TraesCS4A01G366300 chr5B 80.054 737 130 8 1041 1764 676018107 676017375 1.880000e-146 531.0
30 TraesCS4A01G366300 chr5B 75.039 1278 244 49 1079 2308 671298127 671296877 3.150000e-144 523.0
31 TraesCS4A01G366300 chr5B 73.877 1313 262 56 1053 2320 671903053 671901777 5.420000e-122 449.0
32 TraesCS4A01G366300 chr5B 84.468 470 38 16 8227 8675 672434694 672434239 1.960000e-116 431.0
33 TraesCS4A01G366300 chr5B 84.468 470 38 16 8227 8675 672468109 672467654 1.960000e-116 431.0
34 TraesCS4A01G366300 chr5B 81.352 488 85 4 1047 1528 671721247 671720760 9.260000e-105 392.0
35 TraesCS4A01G366300 chr5B 77.286 700 117 21 2611 3278 671835619 671834930 3.350000e-99 374.0
36 TraesCS4A01G366300 chr5B 87.859 313 38 0 1044 1356 671497513 671497825 1.560000e-97 368.0
37 TraesCS4A01G366300 chr5B 76.108 632 114 24 1024 1623 671453850 671454476 7.470000e-76 296.0
38 TraesCS4A01G366300 chr5B 77.582 397 46 23 8692 9078 671717985 671717622 6.030000e-47 200.0
39 TraesCS4A01G366300 chr5B 77.457 173 34 5 8437 8605 69133244 69133073 2.260000e-16 99.0
40 TraesCS4A01G366300 chr5B 74.222 225 45 6 3059 3281 671481118 671481331 2.280000e-11 82.4
41 TraesCS4A01G366300 chrUn 88.200 2000 168 30 3529 5508 67312226 67314177 0.000000e+00 2324.0
42 TraesCS4A01G366300 chrUn 88.200 2000 168 30 3529 5508 315259079 315257128 0.000000e+00 2324.0
43 TraesCS4A01G366300 chrUn 88.150 2000 169 31 3529 5508 248990771 248992722 0.000000e+00 2318.0
44 TraesCS4A01G366300 chrUn 90.179 1619 113 15 1910 3508 67294381 67292789 0.000000e+00 2067.0
45 TraesCS4A01G366300 chrUn 90.683 966 67 12 3529 4483 67291695 67290742 0.000000e+00 1264.0
46 TraesCS4A01G366300 chrUn 89.494 771 58 13 8693 9452 248995935 248996693 0.000000e+00 953.0
47 TraesCS4A01G366300 chrUn 89.494 771 58 13 8693 9452 332781840 332781082 0.000000e+00 953.0
48 TraesCS4A01G366300 chrUn 89.371 715 67 6 6368 7075 248992999 248993711 0.000000e+00 891.0
49 TraesCS4A01G366300 chrUn 89.231 715 68 6 6368 7075 67314454 67315166 0.000000e+00 885.0
50 TraesCS4A01G366300 chrUn 89.326 712 67 6 6371 7075 315256848 315256139 0.000000e+00 885.0
51 TraesCS4A01G366300 chrUn 91.818 550 34 5 7674 8222 67315979 67316518 0.000000e+00 756.0
52 TraesCS4A01G366300 chrUn 91.636 550 35 5 7674 8222 67288824 67288285 0.000000e+00 750.0
53 TraesCS4A01G366300 chrUn 90.799 413 33 2 7071 7483 67315244 67315651 1.870000e-151 547.0
54 TraesCS4A01G366300 chrUn 90.799 413 33 2 7071 7483 248993789 248994196 1.870000e-151 547.0
55 TraesCS4A01G366300 chrUn 90.625 416 34 2 7071 7486 315256061 315255651 1.870000e-151 547.0
56 TraesCS4A01G366300 chrUn 84.468 470 38 16 8227 8675 67287937 67287482 1.960000e-116 431.0
57 TraesCS4A01G366300 chrUn 84.468 470 38 16 8227 8675 67316866 67317321 1.960000e-116 431.0
58 TraesCS4A01G366300 chrUn 84.468 470 38 16 8227 8675 248995372 248995827 1.960000e-116 431.0
59 TraesCS4A01G366300 chrUn 84.468 470 38 16 8227 8675 332782403 332781948 1.960000e-116 431.0
60 TraesCS4A01G366300 chrUn 77.992 518 86 23 5217 5720 314988770 314988267 5.770000e-77 300.0
61 TraesCS4A01G366300 chrUn 93.182 132 9 0 8693 8824 67287374 67287243 2.800000e-45 195.0
62 TraesCS4A01G366300 chrUn 93.182 132 9 0 8693 8824 67317429 67317560 2.800000e-45 195.0
63 TraesCS4A01G366300 chr4B 86.421 1112 121 17 6386 7489 585018554 585017465 0.000000e+00 1190.0
64 TraesCS4A01G366300 chr4B 88.115 488 51 3 4737 5217 585019039 585018552 3.080000e-159 573.0
65 TraesCS4A01G366300 chr4B 89.355 310 25 5 7923 8231 585016804 585016502 5.570000e-102 383.0
66 TraesCS4A01G366300 chr4B 88.938 226 20 3 7674 7896 585017021 585016798 3.500000e-69 274.0
67 TraesCS4A01G366300 chr4B 83.240 179 19 6 4498 4675 585019193 585019025 4.760000e-33 154.0
68 TraesCS4A01G366300 chr4B 88.793 116 12 1 6819 6934 211585336 211585222 3.700000e-29 141.0
69 TraesCS4A01G366300 chr4D 89.146 562 49 7 7675 8231 467219136 467218582 0.000000e+00 689.0
70 TraesCS4A01G366300 chr4D 85.928 668 58 11 7014 7663 467219846 467219197 0.000000e+00 680.0
71 TraesCS4A01G366300 chr4D 84.652 632 81 11 6386 7008 467220512 467219888 5.050000e-172 616.0
72 TraesCS4A01G366300 chr4D 87.045 494 51 5 4737 5217 467221003 467220510 6.720000e-151 545.0
73 TraesCS4A01G366300 chr4D 83.146 178 19 6 4498 4675 467221155 467220989 1.710000e-32 152.0
74 TraesCS4A01G366300 chr5D 77.788 1121 199 30 1041 2127 532271372 532272476 0.000000e+00 645.0
75 TraesCS4A01G366300 chr5D 75.314 1272 252 37 1074 2308 532244146 532242900 4.010000e-153 553.0
76 TraesCS4A01G366300 chr5D 76.528 916 161 26 2403 3278 532335225 532334324 1.510000e-122 451.0
77 TraesCS4A01G366300 chr5D 87.432 366 43 1 9472 9837 532509691 532509329 1.530000e-112 418.0
78 TraesCS4A01G366300 chr5D 79.188 394 44 20 8693 9078 532281307 532280944 1.280000e-58 239.0
79 TraesCS4A01G366300 chr5D 79.343 213 39 4 8383 8591 61472908 61473119 2.860000e-30 145.0
80 TraesCS4A01G366300 chr5D 79.775 178 22 8 8494 8668 532281620 532281454 6.240000e-22 117.0
81 TraesCS4A01G366300 chr6D 77.038 871 159 28 5258 6102 37419923 37420778 6.960000e-126 462.0
82 TraesCS4A01G366300 chr6D 87.193 367 41 4 9472 9837 17112241 17112602 7.110000e-111 412.0
83 TraesCS4A01G366300 chr6D 94.118 85 5 0 6286 6370 368123262 368123178 8.020000e-26 130.0
84 TraesCS4A01G366300 chr2B 85.792 366 42 8 4857 5217 66808311 66808671 7.210000e-101 379.0
85 TraesCS4A01G366300 chr2B 90.798 163 10 5 689 848 37886402 37886562 7.740000e-51 213.0
86 TraesCS4A01G366300 chr1A 79.588 485 87 10 1053 1528 16379781 16379300 4.400000e-88 337.0
87 TraesCS4A01G366300 chr1A 78.558 513 99 7 1024 1528 16301938 16301429 2.650000e-85 327.0
88 TraesCS4A01G366300 chr5A 75.937 694 129 21 2599 3278 31453925 31453256 1.230000e-83 322.0
89 TraesCS4A01G366300 chr5A 90.909 55 5 0 525 579 305978709 305978763 3.810000e-09 75.0
90 TraesCS4A01G366300 chr7D 74.619 721 158 20 5257 5963 162204321 162205030 2.690000e-75 294.0
91 TraesCS4A01G366300 chr7D 91.447 152 8 5 695 843 524912644 524912495 4.660000e-48 204.0
92 TraesCS4A01G366300 chr7D 88.095 168 16 4 689 853 604890299 604890465 7.790000e-46 196.0
93 TraesCS4A01G366300 chr7D 76.039 409 44 21 6004 6367 517347302 517347701 7.910000e-36 163.0
94 TraesCS4A01G366300 chr7D 91.379 58 3 2 520 576 605230513 605230457 2.950000e-10 78.7
95 TraesCS4A01G366300 chr7D 88.525 61 7 0 524 584 65725443 65725503 3.810000e-09 75.0
96 TraesCS4A01G366300 chr3D 75.901 527 75 21 5894 6370 433619533 433619009 1.290000e-53 222.0
97 TraesCS4A01G366300 chr3D 77.163 289 42 13 5895 6162 395814860 395815145 7.960000e-31 147.0
98 TraesCS4A01G366300 chr6B 73.018 782 146 33 5483 6230 626365787 626365037 2.150000e-51 215.0
99 TraesCS4A01G366300 chr6B 90.446 157 11 4 695 848 720912211 720912056 4.660000e-48 204.0
100 TraesCS4A01G366300 chr6B 81.046 153 27 2 5217 5368 651393112 651392961 4.830000e-23 121.0
101 TraesCS4A01G366300 chr6B 88.235 85 10 0 5215 5299 143667245 143667161 1.750000e-17 102.0
102 TraesCS4A01G366300 chr1B 90.184 163 12 4 689 848 24349052 24349213 1.000000e-49 209.0
103 TraesCS4A01G366300 chr2D 90.968 155 11 2 685 838 585383723 585383875 1.300000e-48 206.0
104 TraesCS4A01G366300 chr2D 83.491 212 30 4 6386 6595 175749052 175749260 1.010000e-44 193.0
105 TraesCS4A01G366300 chr2D 90.741 54 5 0 524 577 567597560 567597613 1.370000e-08 73.1
106 TraesCS4A01G366300 chr2D 94.444 36 2 0 3770 3805 383095822 383095787 1.000000e-03 56.5
107 TraesCS4A01G366300 chr7B 88.623 167 13 6 688 848 619430610 619430444 2.170000e-46 198.0
108 TraesCS4A01G366300 chr7A 88.415 164 15 4 688 848 26557096 26557258 2.800000e-45 195.0
109 TraesCS4A01G366300 chr7A 78.889 180 21 12 6202 6367 693089957 693090133 1.350000e-18 106.0
110 TraesCS4A01G366300 chr7A 90.909 55 5 0 525 579 724028846 724028900 3.810000e-09 75.0
111 TraesCS4A01G366300 chr7A 88.136 59 5 2 522 579 115789802 115789859 1.770000e-07 69.4
112 TraesCS4A01G366300 chr3B 87.647 170 16 5 695 860 226081326 226081158 1.010000e-44 193.0
113 TraesCS4A01G366300 chr3B 90.741 54 5 0 524 577 7124885 7124832 1.370000e-08 73.1
114 TraesCS4A01G366300 chr6A 88.136 59 5 2 522 579 21763080 21763137 1.770000e-07 69.4
115 TraesCS4A01G366300 chr6A 88.136 59 5 2 522 579 557570676 557570733 1.770000e-07 69.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G366300 chr4A 639375010 639384846 9836 False 18166.000000 18166 100.000000 1 9837 1 chr4A.!!$F1 9836
1 TraesCS4A01G366300 chr4A 639588312 639594025 5713 False 2116.250000 3775 93.581750 3620 9784 4 chr4A.!!$F7 6164
2 TraesCS4A01G366300 chr4A 639391621 639392668 1047 False 1653.000000 1653 95.138000 8789 9837 1 chr4A.!!$F2 1048
3 TraesCS4A01G366300 chr4A 639232979 639241463 8484 False 1561.500000 3627 94.856833 3926 9829 6 chr4A.!!$F6 5903
4 TraesCS4A01G366300 chr4A 3870377 3872850 2473 False 633.000000 765 86.479750 4731 8231 4 chr4A.!!$F5 3500
5 TraesCS4A01G366300 chr4A 637169705 637171066 1361 True 593.000000 593 75.468000 1047 2372 1 chr4A.!!$R1 1325
6 TraesCS4A01G366300 chr4A 637199856 637200939 1083 True 580.000000 580 76.971000 1042 2127 1 chr4A.!!$R2 1085
7 TraesCS4A01G366300 chr5B 672433373 672441829 8456 True 1547.250000 3541 88.851500 847 9452 4 chr5B.!!$R8 8605
8 TraesCS4A01G366300 chr5B 672466788 672474861 8073 True 1450.000000 3576 88.748833 847 9452 6 chr5B.!!$R9 8605
9 TraesCS4A01G366300 chr5B 676093721 676094453 732 True 542.000000 542 80.326000 1041 1764 1 chr5B.!!$R6 723
10 TraesCS4A01G366300 chr5B 676017375 676018107 732 True 531.000000 531 80.054000 1041 1764 1 chr5B.!!$R5 723
11 TraesCS4A01G366300 chr5B 671296877 671298127 1250 True 523.000000 523 75.039000 1079 2308 1 chr5B.!!$R2 1229
12 TraesCS4A01G366300 chr5B 671901777 671903053 1276 True 449.000000 449 73.877000 1053 2320 1 chr5B.!!$R4 1267
13 TraesCS4A01G366300 chr5B 671834930 671835619 689 True 374.000000 374 77.286000 2611 3278 1 chr5B.!!$R3 667
14 TraesCS4A01G366300 chr5B 671453850 671454476 626 False 296.000000 296 76.108000 1024 1623 1 chr5B.!!$F1 599
15 TraesCS4A01G366300 chr5B 671717622 671721247 3625 True 296.000000 392 79.467000 1047 9078 2 chr5B.!!$R7 8031
16 TraesCS4A01G366300 chrUn 315255651 315259079 3428 True 1252.000000 2324 89.383667 3529 7486 3 chrUn.!!$R3 3957
17 TraesCS4A01G366300 chrUn 248990771 248996693 5922 False 1028.000000 2318 88.456400 3529 9452 5 chrUn.!!$F2 5923
18 TraesCS4A01G366300 chrUn 67287243 67294381 7138 True 941.400000 2067 90.029600 1910 8824 5 chrUn.!!$R2 6914
19 TraesCS4A01G366300 chrUn 67312226 67317560 5334 False 856.333333 2324 89.616333 3529 8824 6 chrUn.!!$F1 5295
20 TraesCS4A01G366300 chrUn 332781082 332782403 1321 True 692.000000 953 86.981000 8227 9452 2 chrUn.!!$R4 1225
21 TraesCS4A01G366300 chrUn 314988267 314988770 503 True 300.000000 300 77.992000 5217 5720 1 chrUn.!!$R1 503
22 TraesCS4A01G366300 chr4B 585016502 585019193 2691 True 514.800000 1190 87.213800 4498 8231 5 chr4B.!!$R2 3733
23 TraesCS4A01G366300 chr4D 467218582 467221155 2573 True 536.400000 689 85.983400 4498 8231 5 chr4D.!!$R1 3733
24 TraesCS4A01G366300 chr5D 532271372 532272476 1104 False 645.000000 645 77.788000 1041 2127 1 chr5D.!!$F2 1086
25 TraesCS4A01G366300 chr5D 532242900 532244146 1246 True 553.000000 553 75.314000 1074 2308 1 chr5D.!!$R1 1234
26 TraesCS4A01G366300 chr5D 532334324 532335225 901 True 451.000000 451 76.528000 2403 3278 1 chr5D.!!$R2 875
27 TraesCS4A01G366300 chr6D 37419923 37420778 855 False 462.000000 462 77.038000 5258 6102 1 chr6D.!!$F2 844
28 TraesCS4A01G366300 chr1A 16301429 16301938 509 True 327.000000 327 78.558000 1024 1528 1 chr1A.!!$R1 504
29 TraesCS4A01G366300 chr5A 31453256 31453925 669 True 322.000000 322 75.937000 2599 3278 1 chr5A.!!$R1 679
30 TraesCS4A01G366300 chr7D 162204321 162205030 709 False 294.000000 294 74.619000 5257 5963 1 chr7D.!!$F2 706
31 TraesCS4A01G366300 chr3D 433619009 433619533 524 True 222.000000 222 75.901000 5894 6370 1 chr3D.!!$R1 476
32 TraesCS4A01G366300 chr6B 626365037 626365787 750 True 215.000000 215 73.018000 5483 6230 1 chr6B.!!$R2 747

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
187 188 0.036858 GTGTGCTCAGGGAAGAGACC 60.037 60.000 0.00 0.0 37.87 3.85 F
195 196 0.037877 AGGGAAGAGACCGAACGAGA 59.962 55.000 0.00 0.0 0.00 4.04 F
491 492 0.038526 CGAACCACACTAGCGAACCT 60.039 55.000 0.00 0.0 0.00 3.50 F
1558 1651 0.097150 CGAAGATGCTGACGACGAGA 59.903 55.000 0.00 0.0 0.00 4.04 F
1885 2018 0.321996 GACAAGGGAGGTGAGTGACC 59.678 60.000 0.00 0.0 46.58 4.02 F
3509 3827 0.036010 GGCTCGCTGGCATGGTATAT 60.036 55.000 0.00 0.0 41.37 0.86 F
3741 5134 0.304705 GCCACTCACAACGTGAACAG 59.695 55.000 0.00 0.0 42.26 3.16 F
4695 6113 1.599797 GTGCCGGGTGTAGTGCTTT 60.600 57.895 2.18 0.0 0.00 3.51 F
6091 7569 1.205893 CAAGGAGGAGAAGGAGTTCGG 59.794 57.143 0.00 0.0 37.79 4.30 F
7949 12736 1.002069 TGGAGGGGCTCATTTCATGT 58.998 50.000 0.00 0.0 31.08 3.21 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1799 1928 0.457851 GTCCTCGGACACCATGAGAG 59.542 60.000 11.12 0.00 44.02 3.20 R
1944 2092 0.537188 CTGCATTCACCCGAGTACCT 59.463 55.000 0.00 0.00 0.00 3.08 R
2259 2422 0.868406 CGACAAAGCACCACTCCTTC 59.132 55.000 0.00 0.00 0.00 3.46 R
3303 3620 0.297230 CAAAACAAACAGGCGCAACG 59.703 50.000 10.83 0.00 0.00 4.10 R
3609 5002 0.653636 TCCAAGCGTTCGTTGTTCAC 59.346 50.000 0.00 0.00 0.00 3.18 R
4678 6096 0.397187 TTAAAGCACTACACCCGGCA 59.603 50.000 0.00 0.00 0.00 5.69 R
5341 6787 1.315690 GAGTAAAAATAGGGGCGGCC 58.684 55.000 22.00 22.00 0.00 6.13 R
6144 7623 0.333312 ATCACCGCCCATTGGGTTTA 59.667 50.000 22.82 5.36 46.51 2.01 R
8064 12851 1.997606 GTTGGATGGAACTAACGGACG 59.002 52.381 0.00 0.00 0.00 4.79 R
9043 14357 1.339610 CATGCAAAACCCTCCGAAACA 59.660 47.619 0.00 0.00 0.00 2.83 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.809601 GCCGTGCTCGTCGATTGT 60.810 61.111 7.47 0.00 35.01 2.71
18 19 3.071459 GCCGTGCTCGTCGATTGTG 62.071 63.158 7.47 0.00 35.01 3.33
19 20 1.443702 CCGTGCTCGTCGATTGTGA 60.444 57.895 7.47 0.00 35.01 3.58
20 21 1.674611 CCGTGCTCGTCGATTGTGAC 61.675 60.000 7.47 0.00 35.49 3.67
21 22 1.674611 CGTGCTCGTCGATTGTGACC 61.675 60.000 0.00 0.00 35.40 4.02
22 23 0.666274 GTGCTCGTCGATTGTGACCA 60.666 55.000 0.00 0.00 35.40 4.02
23 24 0.666274 TGCTCGTCGATTGTGACCAC 60.666 55.000 0.00 0.00 35.40 4.16
24 25 1.674611 GCTCGTCGATTGTGACCACG 61.675 60.000 0.00 0.00 35.40 4.94
25 26 1.674611 CTCGTCGATTGTGACCACGC 61.675 60.000 0.00 0.00 35.40 5.34
26 27 2.726691 CGTCGATTGTGACCACGCC 61.727 63.158 0.00 0.00 35.40 5.68
27 28 2.431771 TCGATTGTGACCACGCCG 60.432 61.111 0.00 0.00 0.00 6.46
28 29 2.431771 CGATTGTGACCACGCCGA 60.432 61.111 0.00 0.00 0.00 5.54
29 30 2.024868 CGATTGTGACCACGCCGAA 61.025 57.895 0.00 0.00 0.00 4.30
30 31 1.495951 GATTGTGACCACGCCGAAC 59.504 57.895 0.00 0.00 0.00 3.95
48 49 4.910585 GGGATACGCCGGCCACTG 62.911 72.222 23.46 9.53 37.63 3.66
49 50 4.910585 GGATACGCCGGCCACTGG 62.911 72.222 23.46 9.08 0.00 4.00
82 83 1.755179 GCCACTGCTTGTATCATGGT 58.245 50.000 0.00 0.00 33.53 3.55
83 84 1.402968 GCCACTGCTTGTATCATGGTG 59.597 52.381 0.00 0.00 33.53 4.17
84 85 1.402968 CCACTGCTTGTATCATGGTGC 59.597 52.381 0.00 0.00 0.00 5.01
85 86 2.086094 CACTGCTTGTATCATGGTGCA 58.914 47.619 0.00 0.00 0.00 4.57
86 87 2.086869 ACTGCTTGTATCATGGTGCAC 58.913 47.619 8.80 8.80 0.00 4.57
87 88 1.063027 CTGCTTGTATCATGGTGCACG 59.937 52.381 11.45 0.00 0.00 5.34
88 89 1.338579 TGCTTGTATCATGGTGCACGA 60.339 47.619 11.45 7.55 0.00 4.35
89 90 1.328680 GCTTGTATCATGGTGCACGAG 59.671 52.381 11.45 2.97 0.00 4.18
90 91 1.328680 CTTGTATCATGGTGCACGAGC 59.671 52.381 11.45 0.00 42.57 5.03
131 132 3.762247 CCCCGCATTGGCACCTTG 61.762 66.667 0.00 0.00 41.24 3.61
132 133 2.676121 CCCGCATTGGCACCTTGA 60.676 61.111 0.00 0.00 41.24 3.02
133 134 2.568090 CCGCATTGGCACCTTGAC 59.432 61.111 0.00 0.00 41.24 3.18
134 135 2.568090 CGCATTGGCACCTTGACC 59.432 61.111 0.00 0.00 41.24 4.02
135 136 2.568090 GCATTGGCACCTTGACCG 59.432 61.111 0.00 0.00 40.72 4.79
136 137 2.568090 CATTGGCACCTTGACCGC 59.432 61.111 0.00 0.00 0.00 5.68
137 138 1.973281 CATTGGCACCTTGACCGCT 60.973 57.895 0.00 0.00 0.00 5.52
138 139 1.228552 ATTGGCACCTTGACCGCTT 60.229 52.632 0.00 0.00 0.00 4.68
139 140 0.037590 ATTGGCACCTTGACCGCTTA 59.962 50.000 0.00 0.00 0.00 3.09
140 141 0.037590 TTGGCACCTTGACCGCTTAT 59.962 50.000 0.00 0.00 0.00 1.73
141 142 0.037590 TGGCACCTTGACCGCTTATT 59.962 50.000 0.00 0.00 0.00 1.40
142 143 0.733150 GGCACCTTGACCGCTTATTC 59.267 55.000 0.00 0.00 0.00 1.75
143 144 0.733150 GCACCTTGACCGCTTATTCC 59.267 55.000 0.00 0.00 0.00 3.01
144 145 1.379527 CACCTTGACCGCTTATTCCC 58.620 55.000 0.00 0.00 0.00 3.97
145 146 0.255033 ACCTTGACCGCTTATTCCCC 59.745 55.000 0.00 0.00 0.00 4.81
146 147 0.546598 CCTTGACCGCTTATTCCCCT 59.453 55.000 0.00 0.00 0.00 4.79
147 148 1.475213 CCTTGACCGCTTATTCCCCTC 60.475 57.143 0.00 0.00 0.00 4.30
148 149 1.209504 CTTGACCGCTTATTCCCCTCA 59.790 52.381 0.00 0.00 0.00 3.86
149 150 1.507140 TGACCGCTTATTCCCCTCAT 58.493 50.000 0.00 0.00 0.00 2.90
150 151 1.416401 TGACCGCTTATTCCCCTCATC 59.584 52.381 0.00 0.00 0.00 2.92
151 152 0.393077 ACCGCTTATTCCCCTCATCG 59.607 55.000 0.00 0.00 0.00 3.84
152 153 0.951040 CCGCTTATTCCCCTCATCGC 60.951 60.000 0.00 0.00 0.00 4.58
153 154 0.951040 CGCTTATTCCCCTCATCGCC 60.951 60.000 0.00 0.00 0.00 5.54
154 155 0.398318 GCTTATTCCCCTCATCGCCT 59.602 55.000 0.00 0.00 0.00 5.52
155 156 1.879796 GCTTATTCCCCTCATCGCCTG 60.880 57.143 0.00 0.00 0.00 4.85
156 157 0.764890 TTATTCCCCTCATCGCCTGG 59.235 55.000 0.00 0.00 0.00 4.45
157 158 1.127567 TATTCCCCTCATCGCCTGGG 61.128 60.000 0.00 0.00 40.59 4.45
162 163 3.160047 CTCATCGCCTGGGGAGCT 61.160 66.667 18.77 0.09 0.00 4.09
163 164 3.157252 TCATCGCCTGGGGAGCTC 61.157 66.667 18.77 4.71 0.00 4.09
164 165 3.160047 CATCGCCTGGGGAGCTCT 61.160 66.667 18.77 0.00 0.00 4.09
165 166 2.841988 ATCGCCTGGGGAGCTCTC 60.842 66.667 18.77 10.01 0.00 3.20
166 167 3.686098 ATCGCCTGGGGAGCTCTCA 62.686 63.158 17.22 12.49 0.00 3.27
167 168 2.961559 ATCGCCTGGGGAGCTCTCAT 62.962 60.000 17.22 0.00 0.00 2.90
168 169 2.509916 GCCTGGGGAGCTCTCATG 59.490 66.667 17.22 11.40 0.00 3.07
169 170 2.373707 GCCTGGGGAGCTCTCATGT 61.374 63.158 17.22 0.00 0.00 3.21
170 171 1.525923 CCTGGGGAGCTCTCATGTG 59.474 63.158 17.22 1.66 0.00 3.21
171 172 1.270414 CCTGGGGAGCTCTCATGTGT 61.270 60.000 17.22 0.00 0.00 3.72
172 173 0.107800 CTGGGGAGCTCTCATGTGTG 60.108 60.000 17.22 0.00 0.00 3.82
173 174 1.451028 GGGGAGCTCTCATGTGTGC 60.451 63.158 17.22 12.61 0.00 4.57
174 175 1.601171 GGGAGCTCTCATGTGTGCT 59.399 57.895 20.70 20.70 38.59 4.40
177 178 3.836762 AGCTCTCATGTGTGCTCAG 57.163 52.632 16.34 0.00 0.00 3.35
178 179 0.249676 AGCTCTCATGTGTGCTCAGG 59.750 55.000 16.34 0.00 0.00 3.86
179 180 0.743701 GCTCTCATGTGTGCTCAGGG 60.744 60.000 13.10 0.00 0.00 4.45
180 181 0.900421 CTCTCATGTGTGCTCAGGGA 59.100 55.000 0.00 0.00 0.00 4.20
181 182 1.277273 CTCTCATGTGTGCTCAGGGAA 59.723 52.381 0.00 0.00 0.00 3.97
182 183 1.277273 TCTCATGTGTGCTCAGGGAAG 59.723 52.381 0.00 0.00 0.00 3.46
183 184 1.277273 CTCATGTGTGCTCAGGGAAGA 59.723 52.381 0.00 0.00 0.00 2.87
184 185 1.277273 TCATGTGTGCTCAGGGAAGAG 59.723 52.381 0.00 0.00 38.68 2.85
185 186 1.277273 CATGTGTGCTCAGGGAAGAGA 59.723 52.381 0.00 0.00 37.87 3.10
186 187 0.681733 TGTGTGCTCAGGGAAGAGAC 59.318 55.000 0.00 0.00 37.87 3.36
187 188 0.036858 GTGTGCTCAGGGAAGAGACC 60.037 60.000 0.00 0.00 37.87 3.85
188 189 1.216710 GTGCTCAGGGAAGAGACCG 59.783 63.158 0.00 0.00 37.87 4.79
189 190 1.076727 TGCTCAGGGAAGAGACCGA 59.923 57.895 0.00 0.00 37.87 4.69
190 191 0.541998 TGCTCAGGGAAGAGACCGAA 60.542 55.000 0.00 0.00 37.87 4.30
191 192 0.108567 GCTCAGGGAAGAGACCGAAC 60.109 60.000 0.00 0.00 37.87 3.95
192 193 0.171455 CTCAGGGAAGAGACCGAACG 59.829 60.000 0.00 0.00 37.87 3.95
193 194 0.251033 TCAGGGAAGAGACCGAACGA 60.251 55.000 0.00 0.00 0.00 3.85
194 195 0.171455 CAGGGAAGAGACCGAACGAG 59.829 60.000 0.00 0.00 0.00 4.18
195 196 0.037877 AGGGAAGAGACCGAACGAGA 59.962 55.000 0.00 0.00 0.00 4.04
196 197 0.886563 GGGAAGAGACCGAACGAGAA 59.113 55.000 0.00 0.00 0.00 2.87
197 198 1.477295 GGGAAGAGACCGAACGAGAAT 59.523 52.381 0.00 0.00 0.00 2.40
198 199 2.686915 GGGAAGAGACCGAACGAGAATA 59.313 50.000 0.00 0.00 0.00 1.75
199 200 3.243134 GGGAAGAGACCGAACGAGAATAG 60.243 52.174 0.00 0.00 0.00 1.73
200 201 3.243134 GGAAGAGACCGAACGAGAATAGG 60.243 52.174 0.00 0.00 0.00 2.57
201 202 2.299521 AGAGACCGAACGAGAATAGGG 58.700 52.381 0.00 0.00 0.00 3.53
202 203 1.337387 GAGACCGAACGAGAATAGGGG 59.663 57.143 0.00 0.00 0.00 4.79
203 204 0.249363 GACCGAACGAGAATAGGGGC 60.249 60.000 0.00 0.00 0.00 5.80
204 205 1.299926 CCGAACGAGAATAGGGGCG 60.300 63.158 0.00 0.00 0.00 6.13
205 206 1.436336 CGAACGAGAATAGGGGCGT 59.564 57.895 0.00 0.00 38.81 5.68
206 207 0.870307 CGAACGAGAATAGGGGCGTG 60.870 60.000 0.00 0.00 37.03 5.34
207 208 0.458669 GAACGAGAATAGGGGCGTGA 59.541 55.000 0.00 0.00 37.03 4.35
208 209 0.175073 AACGAGAATAGGGGCGTGAC 59.825 55.000 0.00 0.00 37.03 3.67
209 210 1.067582 CGAGAATAGGGGCGTGACC 59.932 63.158 0.00 0.00 37.93 4.02
210 211 1.067582 GAGAATAGGGGCGTGACCG 59.932 63.158 0.00 0.00 40.62 4.79
227 228 0.790207 CCGCGATGGTATGGAATTCG 59.210 55.000 8.23 0.00 0.00 3.34
228 229 1.497991 CGCGATGGTATGGAATTCGT 58.502 50.000 0.00 0.00 32.65 3.85
229 230 1.864711 CGCGATGGTATGGAATTCGTT 59.135 47.619 0.00 0.00 32.65 3.85
230 231 2.286833 CGCGATGGTATGGAATTCGTTT 59.713 45.455 0.00 0.00 32.65 3.60
231 232 3.242608 CGCGATGGTATGGAATTCGTTTT 60.243 43.478 0.00 0.00 32.65 2.43
232 233 4.035017 GCGATGGTATGGAATTCGTTTTG 58.965 43.478 0.00 0.00 32.65 2.44
233 234 4.438200 GCGATGGTATGGAATTCGTTTTGT 60.438 41.667 0.00 0.00 32.65 2.83
234 235 5.027737 CGATGGTATGGAATTCGTTTTGTG 58.972 41.667 0.00 0.00 0.00 3.33
235 236 5.163804 CGATGGTATGGAATTCGTTTTGTGA 60.164 40.000 0.00 0.00 0.00 3.58
236 237 6.458206 CGATGGTATGGAATTCGTTTTGTGAT 60.458 38.462 0.00 0.00 0.00 3.06
237 238 6.189677 TGGTATGGAATTCGTTTTGTGATC 57.810 37.500 0.00 0.00 0.00 2.92
238 239 5.707764 TGGTATGGAATTCGTTTTGTGATCA 59.292 36.000 0.00 0.00 0.00 2.92
239 240 6.376864 TGGTATGGAATTCGTTTTGTGATCAT 59.623 34.615 0.00 0.00 0.00 2.45
240 241 6.692681 GGTATGGAATTCGTTTTGTGATCATG 59.307 38.462 0.00 0.00 0.00 3.07
241 242 5.703978 TGGAATTCGTTTTGTGATCATGT 57.296 34.783 0.00 0.00 0.00 3.21
242 243 6.809630 TGGAATTCGTTTTGTGATCATGTA 57.190 33.333 0.00 0.00 0.00 2.29
243 244 6.607689 TGGAATTCGTTTTGTGATCATGTAC 58.392 36.000 0.00 0.00 0.00 2.90
244 245 5.732647 GGAATTCGTTTTGTGATCATGTACG 59.267 40.000 0.00 7.42 0.00 3.67
245 246 6.401688 GGAATTCGTTTTGTGATCATGTACGA 60.402 38.462 16.22 16.22 35.11 3.43
246 247 6.662414 ATTCGTTTTGTGATCATGTACGAT 57.338 33.333 19.01 10.94 36.58 3.73
247 248 5.696260 TCGTTTTGTGATCATGTACGATC 57.304 39.130 16.22 4.34 41.88 3.69
248 249 4.264380 TCGTTTTGTGATCATGTACGATCG 59.736 41.667 14.88 14.88 44.02 3.69
249 250 4.264380 CGTTTTGTGATCATGTACGATCGA 59.736 41.667 24.34 0.00 44.02 3.59
250 251 5.552656 CGTTTTGTGATCATGTACGATCGAG 60.553 44.000 24.34 6.05 44.02 4.04
251 252 3.626028 TGTGATCATGTACGATCGAGG 57.374 47.619 24.34 0.58 44.02 4.63
252 253 3.211045 TGTGATCATGTACGATCGAGGA 58.789 45.455 24.34 7.15 44.02 3.71
253 254 3.821033 TGTGATCATGTACGATCGAGGAT 59.179 43.478 24.34 12.20 44.02 3.24
254 255 4.278419 TGTGATCATGTACGATCGAGGATT 59.722 41.667 24.34 0.39 44.02 3.01
255 256 5.221244 TGTGATCATGTACGATCGAGGATTT 60.221 40.000 24.34 0.00 44.02 2.17
256 257 5.117745 GTGATCATGTACGATCGAGGATTTG 59.882 44.000 24.34 11.07 44.02 2.32
257 258 3.381045 TCATGTACGATCGAGGATTTGC 58.619 45.455 24.34 1.86 0.00 3.68
258 259 2.951457 TGTACGATCGAGGATTTGCA 57.049 45.000 24.34 4.87 0.00 4.08
259 260 2.536365 TGTACGATCGAGGATTTGCAC 58.464 47.619 24.34 5.55 0.00 4.57
260 261 2.094442 TGTACGATCGAGGATTTGCACA 60.094 45.455 24.34 7.92 0.00 4.57
261 262 1.359848 ACGATCGAGGATTTGCACAC 58.640 50.000 24.34 0.00 0.00 3.82
262 263 1.337728 ACGATCGAGGATTTGCACACA 60.338 47.619 24.34 0.00 0.00 3.72
263 264 1.325640 CGATCGAGGATTTGCACACAG 59.674 52.381 10.26 0.00 0.00 3.66
264 265 2.621338 GATCGAGGATTTGCACACAGA 58.379 47.619 0.00 0.00 0.00 3.41
265 266 1.795768 TCGAGGATTTGCACACAGAC 58.204 50.000 0.00 0.00 0.00 3.51
266 267 1.069978 TCGAGGATTTGCACACAGACA 59.930 47.619 0.00 0.00 0.00 3.41
267 268 1.195448 CGAGGATTTGCACACAGACAC 59.805 52.381 0.00 0.00 0.00 3.67
268 269 2.221169 GAGGATTTGCACACAGACACA 58.779 47.619 0.00 0.00 0.00 3.72
269 270 2.618241 GAGGATTTGCACACAGACACAA 59.382 45.455 0.00 0.00 0.00 3.33
270 271 3.023119 AGGATTTGCACACAGACACAAA 58.977 40.909 0.00 0.00 36.53 2.83
271 272 3.446873 AGGATTTGCACACAGACACAAAA 59.553 39.130 0.00 0.00 35.79 2.44
272 273 4.081752 AGGATTTGCACACAGACACAAAAA 60.082 37.500 0.00 0.00 35.79 1.94
273 274 4.268405 GGATTTGCACACAGACACAAAAAG 59.732 41.667 0.00 0.00 35.79 2.27
274 275 2.937469 TGCACACAGACACAAAAAGG 57.063 45.000 0.00 0.00 0.00 3.11
275 276 1.476085 TGCACACAGACACAAAAAGGG 59.524 47.619 0.00 0.00 0.00 3.95
276 277 1.802508 GCACACAGACACAAAAAGGGC 60.803 52.381 0.00 0.00 0.00 5.19
277 278 1.476085 CACACAGACACAAAAAGGGCA 59.524 47.619 0.00 0.00 0.00 5.36
278 279 1.750778 ACACAGACACAAAAAGGGCAG 59.249 47.619 0.00 0.00 0.00 4.85
279 280 2.023673 CACAGACACAAAAAGGGCAGA 58.976 47.619 0.00 0.00 0.00 4.26
280 281 2.624838 CACAGACACAAAAAGGGCAGAT 59.375 45.455 0.00 0.00 0.00 2.90
281 282 3.820467 CACAGACACAAAAAGGGCAGATA 59.180 43.478 0.00 0.00 0.00 1.98
282 283 4.460382 CACAGACACAAAAAGGGCAGATAT 59.540 41.667 0.00 0.00 0.00 1.63
283 284 5.647658 CACAGACACAAAAAGGGCAGATATA 59.352 40.000 0.00 0.00 0.00 0.86
284 285 6.319658 CACAGACACAAAAAGGGCAGATATAT 59.680 38.462 0.00 0.00 0.00 0.86
285 286 6.319658 ACAGACACAAAAAGGGCAGATATATG 59.680 38.462 0.00 0.00 0.00 1.78
286 287 6.543465 CAGACACAAAAAGGGCAGATATATGA 59.457 38.462 0.39 0.00 0.00 2.15
287 288 7.230108 CAGACACAAAAAGGGCAGATATATGAT 59.770 37.037 0.39 0.00 0.00 2.45
288 289 7.781693 AGACACAAAAAGGGCAGATATATGATT 59.218 33.333 0.39 0.00 0.00 2.57
289 290 8.310122 ACACAAAAAGGGCAGATATATGATTT 57.690 30.769 0.39 0.00 0.00 2.17
290 291 8.761689 ACACAAAAAGGGCAGATATATGATTTT 58.238 29.630 0.39 2.58 0.00 1.82
291 292 9.252962 CACAAAAAGGGCAGATATATGATTTTC 57.747 33.333 0.39 0.00 0.00 2.29
292 293 9.205513 ACAAAAAGGGCAGATATATGATTTTCT 57.794 29.630 0.39 0.00 0.00 2.52
296 297 7.771927 AGGGCAGATATATGATTTTCTTTGG 57.228 36.000 0.39 0.00 0.00 3.28
297 298 7.529555 AGGGCAGATATATGATTTTCTTTGGA 58.470 34.615 0.39 0.00 0.00 3.53
298 299 7.668886 AGGGCAGATATATGATTTTCTTTGGAG 59.331 37.037 0.39 0.00 0.00 3.86
299 300 7.449704 GGGCAGATATATGATTTTCTTTGGAGT 59.550 37.037 0.39 0.00 0.00 3.85
300 301 9.507329 GGCAGATATATGATTTTCTTTGGAGTA 57.493 33.333 0.39 0.00 0.00 2.59
308 309 6.970484 TGATTTTCTTTGGAGTAGAAACAGC 58.030 36.000 0.00 0.00 40.33 4.40
309 310 6.545666 TGATTTTCTTTGGAGTAGAAACAGCA 59.454 34.615 0.00 0.00 40.33 4.41
310 311 6.959639 TTTTCTTTGGAGTAGAAACAGCAT 57.040 33.333 0.00 0.00 40.33 3.79
311 312 5.947228 TTCTTTGGAGTAGAAACAGCATG 57.053 39.130 0.00 0.00 46.00 4.06
325 326 3.604065 CAGCATGTCAGATTTCGATGG 57.396 47.619 0.00 0.00 0.00 3.51
326 327 2.289820 CAGCATGTCAGATTTCGATGGG 59.710 50.000 0.00 0.00 0.00 4.00
327 328 2.092753 AGCATGTCAGATTTCGATGGGT 60.093 45.455 0.00 0.00 0.00 4.51
328 329 2.684881 GCATGTCAGATTTCGATGGGTT 59.315 45.455 0.00 0.00 0.00 4.11
329 330 3.488047 GCATGTCAGATTTCGATGGGTTG 60.488 47.826 0.00 0.00 0.00 3.77
330 331 2.710377 TGTCAGATTTCGATGGGTTGG 58.290 47.619 0.00 0.00 0.00 3.77
331 332 1.401905 GTCAGATTTCGATGGGTTGGC 59.598 52.381 0.00 0.00 0.00 4.52
332 333 1.004161 TCAGATTTCGATGGGTTGGCA 59.996 47.619 0.00 0.00 0.00 4.92
333 334 1.402968 CAGATTTCGATGGGTTGGCAG 59.597 52.381 0.00 0.00 0.00 4.85
334 335 0.740737 GATTTCGATGGGTTGGCAGG 59.259 55.000 0.00 0.00 0.00 4.85
335 336 1.322538 ATTTCGATGGGTTGGCAGGC 61.323 55.000 0.00 0.00 0.00 4.85
336 337 3.936772 TTCGATGGGTTGGCAGGCC 62.937 63.158 2.62 2.62 0.00 5.19
337 338 4.738998 CGATGGGTTGGCAGGCCA 62.739 66.667 9.35 9.35 45.63 5.36
347 348 2.530460 TGGCAGGCCAGAATAATTGT 57.470 45.000 9.35 0.00 41.89 2.71
348 349 3.660970 TGGCAGGCCAGAATAATTGTA 57.339 42.857 9.35 0.00 41.89 2.41
349 350 4.183223 TGGCAGGCCAGAATAATTGTAT 57.817 40.909 9.35 0.00 41.89 2.29
350 351 4.545678 TGGCAGGCCAGAATAATTGTATT 58.454 39.130 9.35 0.00 41.89 1.89
351 352 4.341806 TGGCAGGCCAGAATAATTGTATTG 59.658 41.667 9.35 0.00 41.89 1.90
352 353 4.262164 GGCAGGCCAGAATAATTGTATTGG 60.262 45.833 5.01 0.00 35.81 3.16
353 354 4.262164 GCAGGCCAGAATAATTGTATTGGG 60.262 45.833 5.01 0.00 29.69 4.12
354 355 3.897505 AGGCCAGAATAATTGTATTGGGC 59.102 43.478 17.67 17.67 41.66 5.36
355 356 4.257267 GCCAGAATAATTGTATTGGGCC 57.743 45.455 0.00 0.00 39.09 5.80
356 357 3.897505 GCCAGAATAATTGTATTGGGCCT 59.102 43.478 4.53 0.00 39.09 5.19
357 358 5.076873 GCCAGAATAATTGTATTGGGCCTA 58.923 41.667 4.53 0.00 39.09 3.93
358 359 5.183904 GCCAGAATAATTGTATTGGGCCTAG 59.816 44.000 4.53 0.00 39.09 3.02
359 360 5.183904 CCAGAATAATTGTATTGGGCCTAGC 59.816 44.000 4.53 0.00 29.69 3.42
360 361 6.006449 CAGAATAATTGTATTGGGCCTAGCT 58.994 40.000 4.53 0.00 29.69 3.32
361 362 7.168219 CAGAATAATTGTATTGGGCCTAGCTA 58.832 38.462 4.53 0.00 29.69 3.32
362 363 7.335422 CAGAATAATTGTATTGGGCCTAGCTAG 59.665 40.741 14.20 14.20 29.69 3.42
363 364 6.704056 ATAATTGTATTGGGCCTAGCTAGT 57.296 37.500 19.31 2.36 0.00 2.57
364 365 3.838244 TTGTATTGGGCCTAGCTAGTG 57.162 47.619 19.31 11.69 0.00 2.74
365 366 2.047061 TGTATTGGGCCTAGCTAGTGG 58.953 52.381 19.31 7.32 0.00 4.00
366 367 2.047830 GTATTGGGCCTAGCTAGTGGT 58.952 52.381 19.31 2.43 0.00 4.16
367 368 1.132500 ATTGGGCCTAGCTAGTGGTC 58.868 55.000 19.31 7.53 0.00 4.02
368 369 0.042731 TTGGGCCTAGCTAGTGGTCT 59.957 55.000 19.31 0.00 0.00 3.85
369 370 0.397254 TGGGCCTAGCTAGTGGTCTC 60.397 60.000 19.31 6.29 0.00 3.36
370 371 1.116536 GGGCCTAGCTAGTGGTCTCC 61.117 65.000 19.31 9.65 0.00 3.71
371 372 0.397254 GGCCTAGCTAGTGGTCTCCA 60.397 60.000 19.31 0.00 0.00 3.86
385 386 1.410004 TCTCCACCAGACTTCGTTGT 58.590 50.000 0.00 0.00 0.00 3.32
386 387 1.068588 TCTCCACCAGACTTCGTTGTG 59.931 52.381 0.00 0.00 0.00 3.33
387 388 0.531974 TCCACCAGACTTCGTTGTGC 60.532 55.000 0.00 0.00 0.00 4.57
388 389 1.507141 CCACCAGACTTCGTTGTGCC 61.507 60.000 0.00 0.00 0.00 5.01
389 390 0.532862 CACCAGACTTCGTTGTGCCT 60.533 55.000 0.00 0.00 0.00 4.75
390 391 0.532862 ACCAGACTTCGTTGTGCCTG 60.533 55.000 0.00 0.00 0.00 4.85
391 392 1.571460 CAGACTTCGTTGTGCCTGC 59.429 57.895 0.00 0.00 0.00 4.85
392 393 1.598130 AGACTTCGTTGTGCCTGCC 60.598 57.895 0.00 0.00 0.00 4.85
393 394 2.954753 GACTTCGTTGTGCCTGCCG 61.955 63.158 0.00 0.00 0.00 5.69
394 395 2.664851 CTTCGTTGTGCCTGCCGA 60.665 61.111 0.00 0.00 0.00 5.54
395 396 2.664851 TTCGTTGTGCCTGCCGAG 60.665 61.111 0.00 0.00 0.00 4.63
396 397 3.158537 TTCGTTGTGCCTGCCGAGA 62.159 57.895 0.00 0.00 0.00 4.04
397 398 3.114616 CGTTGTGCCTGCCGAGAG 61.115 66.667 0.00 0.00 0.00 3.20
412 413 2.408050 CGAGAGGCCTGAATAATTCGG 58.592 52.381 12.00 0.00 35.78 4.30
413 414 2.224066 CGAGAGGCCTGAATAATTCGGT 60.224 50.000 12.00 0.00 34.15 4.69
414 415 3.394719 GAGAGGCCTGAATAATTCGGTC 58.605 50.000 12.00 0.00 34.15 4.79
415 416 2.104963 AGAGGCCTGAATAATTCGGTCC 59.895 50.000 12.00 0.00 34.15 4.46
416 417 1.202651 AGGCCTGAATAATTCGGTCCG 60.203 52.381 3.11 4.39 34.15 4.79
417 418 1.226746 GCCTGAATAATTCGGTCCGG 58.773 55.000 12.29 0.00 34.15 5.14
418 419 1.226746 CCTGAATAATTCGGTCCGGC 58.773 55.000 12.29 0.00 34.15 6.13
419 420 1.226746 CTGAATAATTCGGTCCGGCC 58.773 55.000 12.29 0.00 0.00 6.13
420 421 0.834612 TGAATAATTCGGTCCGGCCT 59.165 50.000 12.29 0.00 34.25 5.19
421 422 2.036733 CTGAATAATTCGGTCCGGCCTA 59.963 50.000 12.29 0.50 34.25 3.93
422 423 2.435069 TGAATAATTCGGTCCGGCCTAA 59.565 45.455 12.29 8.46 34.25 2.69
423 424 2.538512 ATAATTCGGTCCGGCCTAAC 57.461 50.000 12.29 0.00 34.25 2.34
424 425 1.193323 TAATTCGGTCCGGCCTAACA 58.807 50.000 12.29 0.00 34.25 2.41
425 426 0.325602 AATTCGGTCCGGCCTAACAA 59.674 50.000 12.29 0.00 34.25 2.83
426 427 0.325602 ATTCGGTCCGGCCTAACAAA 59.674 50.000 12.29 0.00 34.25 2.83
427 428 0.603439 TTCGGTCCGGCCTAACAAAC 60.603 55.000 12.29 0.00 34.25 2.93
428 429 1.301874 CGGTCCGGCCTAACAAACA 60.302 57.895 2.34 0.00 34.25 2.83
429 430 1.296056 CGGTCCGGCCTAACAAACAG 61.296 60.000 2.34 0.00 34.25 3.16
430 431 0.250597 GGTCCGGCCTAACAAACAGT 60.251 55.000 0.00 0.00 0.00 3.55
431 432 1.002315 GGTCCGGCCTAACAAACAGTA 59.998 52.381 0.00 0.00 0.00 2.74
432 433 2.344025 GTCCGGCCTAACAAACAGTAG 58.656 52.381 0.00 0.00 0.00 2.57
433 434 1.276989 TCCGGCCTAACAAACAGTAGG 59.723 52.381 0.00 0.00 0.00 3.18
436 437 2.088950 GCCTAACAAACAGTAGGCGA 57.911 50.000 5.99 0.00 44.52 5.54
437 438 2.419667 GCCTAACAAACAGTAGGCGAA 58.580 47.619 5.99 0.00 44.52 4.70
438 439 2.809696 GCCTAACAAACAGTAGGCGAAA 59.190 45.455 5.99 0.00 44.52 3.46
439 440 3.364664 GCCTAACAAACAGTAGGCGAAAC 60.365 47.826 5.99 0.00 44.52 2.78
440 441 3.187842 CCTAACAAACAGTAGGCGAAACC 59.812 47.826 0.00 0.00 39.61 3.27
451 452 1.499049 GGCGAAACCTAATCCTAGCG 58.501 55.000 0.00 0.00 34.51 4.26
452 453 1.499049 GCGAAACCTAATCCTAGCGG 58.501 55.000 0.00 0.00 0.00 5.52
453 454 1.068127 GCGAAACCTAATCCTAGCGGA 59.932 52.381 0.00 0.00 45.16 5.54
454 455 2.740452 CGAAACCTAATCCTAGCGGAC 58.260 52.381 0.00 0.00 43.51 4.79
455 456 2.361438 CGAAACCTAATCCTAGCGGACT 59.639 50.000 0.00 0.00 43.51 3.85
456 457 3.567164 CGAAACCTAATCCTAGCGGACTA 59.433 47.826 0.00 0.00 43.51 2.59
457 458 4.556302 CGAAACCTAATCCTAGCGGACTAC 60.556 50.000 0.00 0.00 43.51 2.73
458 459 2.502295 ACCTAATCCTAGCGGACTACG 58.498 52.381 0.00 0.00 43.51 3.51
459 460 1.811359 CCTAATCCTAGCGGACTACGG 59.189 57.143 0.00 0.00 43.51 4.02
460 461 2.551721 CCTAATCCTAGCGGACTACGGA 60.552 54.545 0.00 0.00 43.51 4.69
461 462 2.289592 AATCCTAGCGGACTACGGAT 57.710 50.000 0.00 0.00 43.51 4.18
462 463 1.535833 ATCCTAGCGGACTACGGATG 58.464 55.000 0.00 0.00 43.51 3.51
463 464 0.471191 TCCTAGCGGACTACGGATGA 59.529 55.000 0.00 0.00 44.51 2.92
464 465 1.134007 TCCTAGCGGACTACGGATGAA 60.134 52.381 0.00 0.00 44.51 2.57
465 466 1.679680 CCTAGCGGACTACGGATGAAA 59.320 52.381 0.00 0.00 44.51 2.69
466 467 2.543238 CCTAGCGGACTACGGATGAAAC 60.543 54.545 0.00 0.00 44.51 2.78
467 468 0.892755 AGCGGACTACGGATGAAACA 59.107 50.000 0.00 0.00 44.51 2.83
468 469 1.274167 AGCGGACTACGGATGAAACAA 59.726 47.619 0.00 0.00 44.51 2.83
469 470 2.070783 GCGGACTACGGATGAAACAAA 58.929 47.619 0.00 0.00 44.51 2.83
470 471 2.159747 GCGGACTACGGATGAAACAAAC 60.160 50.000 0.00 0.00 44.51 2.93
471 472 2.091588 CGGACTACGGATGAAACAAACG 59.908 50.000 0.00 0.00 39.42 3.60
472 473 2.159747 GGACTACGGATGAAACAAACGC 60.160 50.000 0.00 0.00 0.00 4.84
473 474 1.458064 ACTACGGATGAAACAAACGCG 59.542 47.619 3.53 3.53 0.00 6.01
474 475 1.722464 CTACGGATGAAACAAACGCGA 59.278 47.619 15.93 0.00 0.00 5.87
475 476 0.938713 ACGGATGAAACAAACGCGAA 59.061 45.000 15.93 0.00 0.00 4.70
476 477 1.314581 CGGATGAAACAAACGCGAAC 58.685 50.000 15.93 0.00 0.00 3.95
477 478 1.681825 GGATGAAACAAACGCGAACC 58.318 50.000 15.93 0.00 0.00 3.62
478 479 1.002251 GGATGAAACAAACGCGAACCA 60.002 47.619 15.93 0.53 0.00 3.67
479 480 2.041244 GATGAAACAAACGCGAACCAC 58.959 47.619 15.93 0.00 0.00 4.16
480 481 0.803117 TGAAACAAACGCGAACCACA 59.197 45.000 15.93 0.81 0.00 4.17
481 482 1.185189 GAAACAAACGCGAACCACAC 58.815 50.000 15.93 0.00 0.00 3.82
482 483 0.806241 AAACAAACGCGAACCACACT 59.194 45.000 15.93 0.00 0.00 3.55
483 484 1.654317 AACAAACGCGAACCACACTA 58.346 45.000 15.93 0.00 0.00 2.74
484 485 1.214367 ACAAACGCGAACCACACTAG 58.786 50.000 15.93 0.00 0.00 2.57
485 486 0.110823 CAAACGCGAACCACACTAGC 60.111 55.000 15.93 0.00 0.00 3.42
488 489 4.255126 GCGAACCACACTAGCGAA 57.745 55.556 0.00 0.00 0.00 4.70
489 490 1.779683 GCGAACCACACTAGCGAAC 59.220 57.895 0.00 0.00 0.00 3.95
490 491 1.623973 GCGAACCACACTAGCGAACC 61.624 60.000 0.00 0.00 0.00 3.62
491 492 0.038526 CGAACCACACTAGCGAACCT 60.039 55.000 0.00 0.00 0.00 3.50
492 493 1.200716 CGAACCACACTAGCGAACCTA 59.799 52.381 0.00 0.00 0.00 3.08
493 494 2.159282 CGAACCACACTAGCGAACCTAT 60.159 50.000 0.00 0.00 0.00 2.57
494 495 3.675228 CGAACCACACTAGCGAACCTATT 60.675 47.826 0.00 0.00 0.00 1.73
495 496 4.439153 CGAACCACACTAGCGAACCTATTA 60.439 45.833 0.00 0.00 0.00 0.98
496 497 5.410355 AACCACACTAGCGAACCTATTAA 57.590 39.130 0.00 0.00 0.00 1.40
497 498 5.007385 ACCACACTAGCGAACCTATTAAG 57.993 43.478 0.00 0.00 0.00 1.85
498 499 4.708421 ACCACACTAGCGAACCTATTAAGA 59.292 41.667 0.00 0.00 0.00 2.10
499 500 5.186409 ACCACACTAGCGAACCTATTAAGAA 59.814 40.000 0.00 0.00 0.00 2.52
500 501 6.103997 CCACACTAGCGAACCTATTAAGAAA 58.896 40.000 0.00 0.00 0.00 2.52
501 502 6.592607 CCACACTAGCGAACCTATTAAGAAAA 59.407 38.462 0.00 0.00 0.00 2.29
502 503 7.118680 CCACACTAGCGAACCTATTAAGAAAAA 59.881 37.037 0.00 0.00 0.00 1.94
526 527 9.838339 AAAAAGATCGATCCAGACTAAATGTAT 57.162 29.630 21.66 0.00 0.00 2.29
527 528 8.824159 AAAGATCGATCCAGACTAAATGTATG 57.176 34.615 21.66 0.00 37.61 2.39
528 529 6.393990 AGATCGATCCAGACTAAATGTATGC 58.606 40.000 21.66 0.00 36.63 3.14
529 530 5.529581 TCGATCCAGACTAAATGTATGCA 57.470 39.130 0.00 0.00 36.63 3.96
530 531 5.532557 TCGATCCAGACTAAATGTATGCAG 58.467 41.667 0.00 0.00 36.63 4.41
531 532 5.301805 TCGATCCAGACTAAATGTATGCAGA 59.698 40.000 0.00 0.00 36.63 4.26
532 533 6.015095 TCGATCCAGACTAAATGTATGCAGAT 60.015 38.462 0.00 0.00 36.63 2.90
533 534 6.309980 CGATCCAGACTAAATGTATGCAGATC 59.690 42.308 0.00 0.00 36.63 2.75
534 535 6.737720 TCCAGACTAAATGTATGCAGATCT 57.262 37.500 0.00 0.00 36.63 2.75
535 536 7.839680 TCCAGACTAAATGTATGCAGATCTA 57.160 36.000 0.00 0.00 36.63 1.98
536 537 8.250143 TCCAGACTAAATGTATGCAGATCTAA 57.750 34.615 0.00 0.00 36.63 2.10
537 538 8.704668 TCCAGACTAAATGTATGCAGATCTAAA 58.295 33.333 0.00 0.00 36.63 1.85
538 539 9.330063 CCAGACTAAATGTATGCAGATCTAAAA 57.670 33.333 0.00 0.00 36.63 1.52
563 564 9.955102 AAAAGTCTTCGTCCTTTAATATTAGGT 57.045 29.630 4.52 0.00 30.95 3.08
613 614 9.197306 ACTTGGTTTAGTATTTTTCCTTCTTGT 57.803 29.630 0.00 0.00 0.00 3.16
621 622 7.602753 AGTATTTTTCCTTCTTGTATTGTGGC 58.397 34.615 0.00 0.00 0.00 5.01
622 623 5.860941 TTTTTCCTTCTTGTATTGTGGCA 57.139 34.783 0.00 0.00 0.00 4.92
623 624 5.860941 TTTTCCTTCTTGTATTGTGGCAA 57.139 34.783 0.00 0.00 0.00 4.52
624 625 5.860941 TTTCCTTCTTGTATTGTGGCAAA 57.139 34.783 0.00 0.00 0.00 3.68
625 626 5.860941 TTCCTTCTTGTATTGTGGCAAAA 57.139 34.783 0.00 0.00 0.00 2.44
626 627 6.418057 TTCCTTCTTGTATTGTGGCAAAAT 57.582 33.333 8.20 8.20 0.00 1.82
627 628 7.531857 TTCCTTCTTGTATTGTGGCAAAATA 57.468 32.000 6.00 6.00 0.00 1.40
628 629 7.531857 TCCTTCTTGTATTGTGGCAAAATAA 57.468 32.000 11.63 0.00 0.00 1.40
629 630 7.601856 TCCTTCTTGTATTGTGGCAAAATAAG 58.398 34.615 11.63 8.80 0.00 1.73
630 631 7.232534 TCCTTCTTGTATTGTGGCAAAATAAGT 59.767 33.333 11.63 0.00 0.00 2.24
631 632 8.519526 CCTTCTTGTATTGTGGCAAAATAAGTA 58.480 33.333 11.63 2.57 0.00 2.24
632 633 9.906660 CTTCTTGTATTGTGGCAAAATAAGTAA 57.093 29.630 11.63 7.12 0.00 2.24
641 642 9.810545 TTGTGGCAAAATAAGTAATAATAAGGC 57.189 29.630 0.00 0.00 0.00 4.35
642 643 8.972127 TGTGGCAAAATAAGTAATAATAAGGCA 58.028 29.630 0.00 0.00 0.00 4.75
643 644 9.463443 GTGGCAAAATAAGTAATAATAAGGCAG 57.537 33.333 0.00 0.00 0.00 4.85
644 645 8.637986 TGGCAAAATAAGTAATAATAAGGCAGG 58.362 33.333 0.00 0.00 0.00 4.85
645 646 8.638873 GGCAAAATAAGTAATAATAAGGCAGGT 58.361 33.333 0.00 0.00 0.00 4.00
646 647 9.463443 GCAAAATAAGTAATAATAAGGCAGGTG 57.537 33.333 0.00 0.00 0.00 4.00
651 652 7.640597 AAGTAATAATAAGGCAGGTGTTTCC 57.359 36.000 0.00 0.00 0.00 3.13
653 654 7.410991 AGTAATAATAAGGCAGGTGTTTCCTT 58.589 34.615 0.00 0.00 45.67 3.36
654 655 7.893833 AGTAATAATAAGGCAGGTGTTTCCTTT 59.106 33.333 0.00 0.00 45.67 3.11
655 656 4.871933 AATAAGGCAGGTGTTTCCTTTG 57.128 40.909 0.00 0.00 45.67 2.77
656 657 2.159179 AAGGCAGGTGTTTCCTTTGT 57.841 45.000 0.00 0.00 45.67 2.83
657 658 1.692411 AGGCAGGTGTTTCCTTTGTC 58.308 50.000 0.00 0.00 45.67 3.18
658 659 1.064017 AGGCAGGTGTTTCCTTTGTCA 60.064 47.619 0.00 0.00 45.67 3.58
659 660 1.754226 GGCAGGTGTTTCCTTTGTCAA 59.246 47.619 0.00 0.00 45.67 3.18
660 661 2.223805 GGCAGGTGTTTCCTTTGTCAAG 60.224 50.000 0.00 0.00 45.67 3.02
661 662 2.687935 GCAGGTGTTTCCTTTGTCAAGA 59.312 45.455 0.00 0.00 45.67 3.02
662 663 3.130340 GCAGGTGTTTCCTTTGTCAAGAA 59.870 43.478 0.00 0.00 45.67 2.52
663 664 4.381505 GCAGGTGTTTCCTTTGTCAAGAAA 60.382 41.667 0.00 0.00 45.67 2.52
664 665 5.719173 CAGGTGTTTCCTTTGTCAAGAAAA 58.281 37.500 2.51 0.00 45.67 2.29
665 666 5.807011 CAGGTGTTTCCTTTGTCAAGAAAAG 59.193 40.000 2.51 0.00 45.67 2.27
666 667 5.714806 AGGTGTTTCCTTTGTCAAGAAAAGA 59.285 36.000 2.51 0.00 45.67 2.52
667 668 6.210584 AGGTGTTTCCTTTGTCAAGAAAAGAA 59.789 34.615 2.51 0.00 45.67 2.52
668 669 6.531594 GGTGTTTCCTTTGTCAAGAAAAGAAG 59.468 38.462 2.51 0.00 36.88 2.85
669 670 7.312899 GTGTTTCCTTTGTCAAGAAAAGAAGA 58.687 34.615 2.51 0.00 36.88 2.87
670 671 7.812669 GTGTTTCCTTTGTCAAGAAAAGAAGAA 59.187 33.333 2.51 0.00 36.88 2.52
671 672 8.028938 TGTTTCCTTTGTCAAGAAAAGAAGAAG 58.971 33.333 2.51 0.00 36.88 2.85
672 673 6.136541 TCCTTTGTCAAGAAAAGAAGAAGC 57.863 37.500 0.00 0.00 36.88 3.86
673 674 4.972440 CCTTTGTCAAGAAAAGAAGAAGCG 59.028 41.667 0.00 0.00 36.88 4.68
674 675 5.220854 CCTTTGTCAAGAAAAGAAGAAGCGA 60.221 40.000 0.00 0.00 36.88 4.93
675 676 5.811399 TTGTCAAGAAAAGAAGAAGCGAA 57.189 34.783 0.00 0.00 0.00 4.70
676 677 6.377327 TTGTCAAGAAAAGAAGAAGCGAAT 57.623 33.333 0.00 0.00 0.00 3.34
677 678 6.377327 TGTCAAGAAAAGAAGAAGCGAATT 57.623 33.333 0.00 0.00 0.00 2.17
678 679 6.795399 TGTCAAGAAAAGAAGAAGCGAATTT 58.205 32.000 0.00 0.00 0.00 1.82
679 680 7.257722 TGTCAAGAAAAGAAGAAGCGAATTTT 58.742 30.769 0.00 0.00 0.00 1.82
680 681 7.220683 TGTCAAGAAAAGAAGAAGCGAATTTTG 59.779 33.333 0.00 0.00 0.00 2.44
681 682 7.220875 GTCAAGAAAAGAAGAAGCGAATTTTGT 59.779 33.333 0.00 0.00 0.00 2.83
682 683 7.220683 TCAAGAAAAGAAGAAGCGAATTTTGTG 59.779 33.333 0.00 0.00 0.00 3.33
683 684 5.460091 AGAAAAGAAGAAGCGAATTTTGTGC 59.540 36.000 0.00 0.00 0.00 4.57
684 685 3.988379 AGAAGAAGCGAATTTTGTGCA 57.012 38.095 0.00 0.00 0.00 4.57
685 686 4.305989 AGAAGAAGCGAATTTTGTGCAA 57.694 36.364 0.00 0.00 0.00 4.08
686 687 4.681744 AGAAGAAGCGAATTTTGTGCAAA 58.318 34.783 0.00 0.00 0.00 3.68
687 688 5.108517 AGAAGAAGCGAATTTTGTGCAAAA 58.891 33.333 11.77 11.77 43.48 2.44
688 689 5.754890 AGAAGAAGCGAATTTTGTGCAAAAT 59.245 32.000 14.88 14.88 43.38 1.82
689 690 6.922957 AGAAGAAGCGAATTTTGTGCAAAATA 59.077 30.769 19.28 0.00 43.38 1.40
690 691 6.695292 AGAAGCGAATTTTGTGCAAAATAG 57.305 33.333 19.28 16.95 43.38 1.73
691 692 6.215845 AGAAGCGAATTTTGTGCAAAATAGT 58.784 32.000 19.28 8.32 43.38 2.12
692 693 6.363357 AGAAGCGAATTTTGTGCAAAATAGTC 59.637 34.615 19.28 14.22 43.38 2.59
693 694 5.772521 AGCGAATTTTGTGCAAAATAGTCT 58.227 33.333 19.28 13.95 43.38 3.24
694 695 5.858581 AGCGAATTTTGTGCAAAATAGTCTC 59.141 36.000 19.28 13.42 43.38 3.36
695 696 5.858581 GCGAATTTTGTGCAAAATAGTCTCT 59.141 36.000 19.28 6.53 43.38 3.10
696 697 6.032880 GCGAATTTTGTGCAAAATAGTCTCTC 59.967 38.462 19.28 12.61 43.38 3.20
697 698 6.524586 CGAATTTTGTGCAAAATAGTCTCTCC 59.475 38.462 19.28 5.32 43.38 3.71
698 699 5.356882 TTTTGTGCAAAATAGTCTCTCCG 57.643 39.130 6.04 0.00 35.57 4.63
699 700 3.678056 TGTGCAAAATAGTCTCTCCGT 57.322 42.857 0.00 0.00 0.00 4.69
700 701 4.002906 TGTGCAAAATAGTCTCTCCGTT 57.997 40.909 0.00 0.00 0.00 4.44
701 702 4.385825 TGTGCAAAATAGTCTCTCCGTTT 58.614 39.130 0.00 0.00 0.00 3.60
702 703 4.451096 TGTGCAAAATAGTCTCTCCGTTTC 59.549 41.667 0.00 0.00 0.00 2.78
703 704 4.691216 GTGCAAAATAGTCTCTCCGTTTCT 59.309 41.667 0.00 0.00 0.00 2.52
704 705 5.867716 GTGCAAAATAGTCTCTCCGTTTCTA 59.132 40.000 0.00 0.00 0.00 2.10
705 706 6.367969 GTGCAAAATAGTCTCTCCGTTTCTAA 59.632 38.462 0.00 0.00 0.00 2.10
706 707 6.932400 TGCAAAATAGTCTCTCCGTTTCTAAA 59.068 34.615 0.00 0.00 0.00 1.85
707 708 7.606456 TGCAAAATAGTCTCTCCGTTTCTAAAT 59.394 33.333 0.00 0.00 0.00 1.40
708 709 9.095065 GCAAAATAGTCTCTCCGTTTCTAAATA 57.905 33.333 0.00 0.00 0.00 1.40
747 748 8.353684 AGAGATTTCACTATGAACTACATACGG 58.646 37.037 0.00 0.00 35.89 4.02
748 749 8.234136 AGATTTCACTATGAACTACATACGGA 57.766 34.615 0.00 0.00 35.89 4.69
749 750 8.353684 AGATTTCACTATGAACTACATACGGAG 58.646 37.037 0.00 0.00 35.89 4.63
750 751 5.434352 TCACTATGAACTACATACGGAGC 57.566 43.478 0.00 0.00 40.07 4.70
751 752 4.885325 TCACTATGAACTACATACGGAGCA 59.115 41.667 0.00 0.00 40.07 4.26
752 753 5.358725 TCACTATGAACTACATACGGAGCAA 59.641 40.000 0.00 0.00 40.07 3.91
753 754 6.040247 CACTATGAACTACATACGGAGCAAA 58.960 40.000 0.00 0.00 40.07 3.68
754 755 6.533723 CACTATGAACTACATACGGAGCAAAA 59.466 38.462 0.00 0.00 40.07 2.44
755 756 7.224753 CACTATGAACTACATACGGAGCAAAAT 59.775 37.037 0.00 0.00 40.07 1.82
756 757 8.418662 ACTATGAACTACATACGGAGCAAAATA 58.581 33.333 0.00 0.00 40.07 1.40
757 758 9.256477 CTATGAACTACATACGGAGCAAAATAA 57.744 33.333 0.00 0.00 40.07 1.40
758 759 7.534085 TGAACTACATACGGAGCAAAATAAG 57.466 36.000 0.00 0.00 0.00 1.73
759 760 7.101054 TGAACTACATACGGAGCAAAATAAGT 58.899 34.615 0.00 0.00 0.00 2.24
760 761 6.903883 ACTACATACGGAGCAAAATAAGTG 57.096 37.500 0.00 0.00 0.00 3.16
761 762 6.636705 ACTACATACGGAGCAAAATAAGTGA 58.363 36.000 0.00 0.00 0.00 3.41
762 763 7.101054 ACTACATACGGAGCAAAATAAGTGAA 58.899 34.615 0.00 0.00 0.00 3.18
763 764 7.769044 ACTACATACGGAGCAAAATAAGTGAAT 59.231 33.333 0.00 0.00 0.00 2.57
764 765 7.016361 ACATACGGAGCAAAATAAGTGAATC 57.984 36.000 0.00 0.00 0.00 2.52
765 766 6.823689 ACATACGGAGCAAAATAAGTGAATCT 59.176 34.615 0.00 0.00 0.00 2.40
766 767 7.985184 ACATACGGAGCAAAATAAGTGAATCTA 59.015 33.333 0.00 0.00 0.00 1.98
767 768 6.663944 ACGGAGCAAAATAAGTGAATCTAC 57.336 37.500 0.00 0.00 0.00 2.59
768 769 6.170506 ACGGAGCAAAATAAGTGAATCTACA 58.829 36.000 0.00 0.00 0.00 2.74
769 770 6.092259 ACGGAGCAAAATAAGTGAATCTACAC 59.908 38.462 0.00 0.00 40.60 2.90
802 803 8.783833 ATGTCTATATACGTCCGTATGTAGTT 57.216 34.615 27.64 17.97 45.13 2.24
803 804 8.607441 TGTCTATATACGTCCGTATGTAGTTT 57.393 34.615 27.64 7.48 45.13 2.66
804 805 8.498358 TGTCTATATACGTCCGTATGTAGTTTG 58.502 37.037 27.64 14.16 45.13 2.93
805 806 8.499162 GTCTATATACGTCCGTATGTAGTTTGT 58.501 37.037 27.64 6.37 45.13 2.83
806 807 9.705290 TCTATATACGTCCGTATGTAGTTTGTA 57.295 33.333 27.64 15.18 45.13 2.41
807 808 9.964253 CTATATACGTCCGTATGTAGTTTGTAG 57.036 37.037 23.96 9.30 42.56 2.74
808 809 6.683974 ATACGTCCGTATGTAGTTTGTAGT 57.316 37.500 11.25 0.00 39.56 2.73
809 810 4.726416 ACGTCCGTATGTAGTTTGTAGTG 58.274 43.478 0.00 0.00 0.00 2.74
810 811 4.100529 CGTCCGTATGTAGTTTGTAGTGG 58.899 47.826 0.00 0.00 0.00 4.00
811 812 4.142622 CGTCCGTATGTAGTTTGTAGTGGA 60.143 45.833 0.00 0.00 0.00 4.02
812 813 5.619757 CGTCCGTATGTAGTTTGTAGTGGAA 60.620 44.000 0.00 0.00 0.00 3.53
813 814 6.335777 GTCCGTATGTAGTTTGTAGTGGAAT 58.664 40.000 0.00 0.00 0.00 3.01
814 815 6.255020 GTCCGTATGTAGTTTGTAGTGGAATG 59.745 42.308 0.00 0.00 0.00 2.67
815 816 6.071221 TCCGTATGTAGTTTGTAGTGGAATGT 60.071 38.462 0.00 0.00 0.00 2.71
816 817 6.255020 CCGTATGTAGTTTGTAGTGGAATGTC 59.745 42.308 0.00 0.00 0.00 3.06
817 818 7.033791 CGTATGTAGTTTGTAGTGGAATGTCT 58.966 38.462 0.00 0.00 0.00 3.41
818 819 8.186163 CGTATGTAGTTTGTAGTGGAATGTCTA 58.814 37.037 0.00 0.00 0.00 2.59
819 820 9.865321 GTATGTAGTTTGTAGTGGAATGTCTAA 57.135 33.333 0.00 0.00 0.00 2.10
821 822 9.787435 ATGTAGTTTGTAGTGGAATGTCTAAAA 57.213 29.630 0.00 0.00 0.00 1.52
822 823 9.616156 TGTAGTTTGTAGTGGAATGTCTAAAAA 57.384 29.630 0.00 0.00 0.00 1.94
824 825 8.974060 AGTTTGTAGTGGAATGTCTAAAAAGA 57.026 30.769 0.00 0.00 28.10 2.52
825 826 8.837389 AGTTTGTAGTGGAATGTCTAAAAAGAC 58.163 33.333 0.00 0.00 39.15 3.01
826 827 8.837389 GTTTGTAGTGGAATGTCTAAAAAGACT 58.163 33.333 7.04 0.00 39.41 3.24
827 828 8.974060 TTGTAGTGGAATGTCTAAAAAGACTT 57.026 30.769 7.04 0.00 39.41 3.01
845 846 9.907229 AAAAGACTTATATTTAGGACAAGGGAG 57.093 33.333 0.00 0.00 0.00 4.30
915 916 2.769893 AGTAACGGCAATTTACGGTGT 58.230 42.857 0.00 0.00 35.05 4.16
916 917 2.481185 AGTAACGGCAATTTACGGTGTG 59.519 45.455 0.00 0.00 35.05 3.82
928 929 2.879103 ACGGTGTGGATCCAAAATCT 57.121 45.000 18.20 0.00 0.00 2.40
956 957 0.254747 GTCGATTCCACCATTCCCCA 59.745 55.000 0.00 0.00 0.00 4.96
960 961 2.102578 GATTCCACCATTCCCCACAAG 58.897 52.381 0.00 0.00 0.00 3.16
1442 1486 1.281899 CCGGCGTTTGAGATCTTCTC 58.718 55.000 6.01 0.00 43.65 2.87
1531 1606 1.301716 GTGGCCTTCGTCTTCTGCA 60.302 57.895 3.32 0.00 0.00 4.41
1558 1651 0.097150 CGAAGATGCTGACGACGAGA 59.903 55.000 0.00 0.00 0.00 4.04
1574 1667 1.129998 CGAGAAGTATGTCACGTCGGT 59.870 52.381 0.00 0.00 40.22 4.69
1666 1765 1.909700 TGAAAATTCTTCCAGCGGCT 58.090 45.000 0.00 0.00 0.00 5.52
1724 1835 1.517832 GTGGGTCGATCCTGGAGTG 59.482 63.158 17.40 0.00 36.25 3.51
1755 1866 1.202976 AGGCATGGCTTGACTGAGTTT 60.203 47.619 17.44 0.00 44.27 2.66
1781 1892 1.343465 ACCAAACCACGAGTCTGGTAG 59.657 52.381 12.78 9.51 44.32 3.18
1799 1928 5.118990 TGGTAGCAATGCAGAGAGATTTAC 58.881 41.667 8.35 0.00 0.00 2.01
1885 2018 0.321996 GACAAGGGAGGTGAGTGACC 59.678 60.000 0.00 0.00 46.58 4.02
1973 2121 3.010420 GGGTGAATGCAGAAACTAGACC 58.990 50.000 0.00 0.00 0.00 3.85
2031 2179 1.504359 TCGCTAACACGTTTTCTGGG 58.496 50.000 0.00 0.00 0.00 4.45
2086 2240 5.062308 GTGAAGAAGGTGTGTCATAATCGTC 59.938 44.000 0.00 0.00 0.00 4.20
2189 2343 2.930109 AGTCAGGAGGTAGGTGATGT 57.070 50.000 0.00 0.00 0.00 3.06
2216 2379 1.978580 GGGAGAGGAGGTGAAAACAGA 59.021 52.381 0.00 0.00 0.00 3.41
2259 2422 4.771114 TGACAAGGGGTCCAATACTATG 57.229 45.455 0.00 0.00 46.38 2.23
2334 2497 2.618241 CAGGTGAGCTAGCTCTACTCTG 59.382 54.545 37.42 30.75 43.12 3.35
2378 2541 5.530171 AGCTATGCTCACACATTTCTATTGG 59.470 40.000 0.00 0.00 30.62 3.16
2381 2544 4.650734 TGCTCACACATTTCTATTGGTGA 58.349 39.130 0.00 0.00 35.33 4.02
2394 2557 7.581213 TTCTATTGGTGACATTGTTGAAAGT 57.419 32.000 0.00 0.00 42.32 2.66
2396 2559 8.862325 TCTATTGGTGACATTGTTGAAAGTAT 57.138 30.769 0.00 0.00 42.32 2.12
2397 2560 9.295825 TCTATTGGTGACATTGTTGAAAGTATT 57.704 29.630 0.00 0.00 42.32 1.89
2518 2702 3.365265 CGAGGTGGTTGGCAAGCC 61.365 66.667 25.02 17.26 0.00 4.35
2541 2731 4.259930 CGTGTTTACCTTTCTTTCGTTCGT 60.260 41.667 0.00 0.00 0.00 3.85
2595 2808 3.780294 AGGGGTTCAGTGATAGCAATACA 59.220 43.478 0.00 0.00 0.00 2.29
2629 2844 4.858850 ACCTGGCATCTTTTGTCATGATA 58.141 39.130 0.00 0.00 39.74 2.15
2631 2846 5.301045 ACCTGGCATCTTTTGTCATGATATG 59.699 40.000 0.00 0.00 39.74 1.78
2632 2847 5.190992 TGGCATCTTTTGTCATGATATGC 57.809 39.130 0.00 2.37 34.22 3.14
2658 2875 8.736742 CGTATTGTGATGAGCATTTAATCAAAC 58.263 33.333 0.00 0.00 32.38 2.93
2678 2897 5.897377 AACTGCAATTATTGGACTGGTAC 57.103 39.130 7.08 0.00 0.00 3.34
2679 2898 3.938963 ACTGCAATTATTGGACTGGTACG 59.061 43.478 7.08 0.00 0.00 3.67
2743 3017 6.421501 TCGACGTGTTGTTTATTTGTATGTCT 59.578 34.615 0.00 0.00 0.00 3.41
2748 3027 7.332430 CGTGTTGTTTATTTGTATGTCTCCCTA 59.668 37.037 0.00 0.00 0.00 3.53
2787 3067 2.688364 GTGCAAACACTAGCTGGTTC 57.312 50.000 0.00 0.00 43.85 3.62
2823 3108 5.705905 ACTCAACAGAAAATAGTTAGCACCC 59.294 40.000 0.00 0.00 0.00 4.61
2871 3156 7.220108 GGGATAATTTTAGTTGCGCTACAAAAG 59.780 37.037 23.41 0.00 40.82 2.27
2878 3163 4.932146 AGTTGCGCTACAAAAGTTTCATT 58.068 34.783 23.41 0.00 40.82 2.57
2939 3225 7.625553 TGAAAAATTATGCCTTTGTTTTCACG 58.374 30.769 9.38 0.00 39.04 4.35
2940 3226 7.492669 TGAAAAATTATGCCTTTGTTTTCACGA 59.507 29.630 9.38 0.00 39.04 4.35
2955 3241 1.418264 TCACGAAGGGTTCCATGTCAA 59.582 47.619 0.00 0.00 0.00 3.18
2993 3279 0.790814 GGTTCTAGCGCACTCAACAC 59.209 55.000 11.47 0.00 0.00 3.32
3026 3312 5.018809 TGCCTTGCTATCCAAAGATTCTTT 58.981 37.500 5.82 5.82 33.67 2.52
3080 3393 3.603965 ATTGGTGAAGGGTACAACCAA 57.396 42.857 14.62 14.62 41.02 3.67
3113 3426 5.958955 TGATGGTAGCTCGATGATCTTATG 58.041 41.667 0.00 0.00 0.00 1.90
3129 3442 1.105457 TATGCAGCAATGTTGAGGGC 58.895 50.000 0.00 0.00 0.00 5.19
3169 3482 7.885399 AGAAAGGTGAGTCTAAATAATGCACTT 59.115 33.333 0.00 0.00 0.00 3.16
3186 3499 6.061022 TGCACTTTATCTCATTGTCCCTTA 57.939 37.500 0.00 0.00 0.00 2.69
3187 3500 6.480763 TGCACTTTATCTCATTGTCCCTTAA 58.519 36.000 0.00 0.00 0.00 1.85
3188 3501 6.945435 TGCACTTTATCTCATTGTCCCTTAAA 59.055 34.615 0.00 0.00 0.00 1.52
3189 3502 7.450014 TGCACTTTATCTCATTGTCCCTTAAAA 59.550 33.333 0.00 0.00 0.00 1.52
3190 3503 8.303876 GCACTTTATCTCATTGTCCCTTAAAAA 58.696 33.333 0.00 0.00 0.00 1.94
3217 3530 1.377987 GTTCATGCCGGGGCTACAA 60.378 57.895 11.55 0.00 42.51 2.41
3226 3539 2.650322 CCGGGGCTACAACATTATGTT 58.350 47.619 4.56 4.56 42.08 2.71
3281 3598 7.910683 GCATTGTTCTCTAGGCTTTGTATAAAC 59.089 37.037 0.00 0.00 0.00 2.01
3313 3630 3.793144 GAGCCTTCGTTGCGCCTG 61.793 66.667 4.18 0.00 0.00 4.85
3327 3644 2.881513 TGCGCCTGTTTGTTTTGATAGA 59.118 40.909 4.18 0.00 0.00 1.98
3330 3647 4.558860 GCGCCTGTTTGTTTTGATAGAATC 59.441 41.667 0.00 0.00 0.00 2.52
3380 3698 9.949174 CTTTTCCTTTTTGGTTGAAATTATTGG 57.051 29.630 0.00 0.00 37.07 3.16
3382 3700 6.000840 TCCTTTTTGGTTGAAATTATTGGCC 58.999 36.000 0.00 0.00 37.07 5.36
3397 3715 2.715749 TGGCCGATCTGATTGAATGT 57.284 45.000 6.46 0.00 0.00 2.71
3412 3730 3.706183 TGAATGTGGTTATTGATGGGCA 58.294 40.909 0.00 0.00 0.00 5.36
3455 3773 1.077644 AGGCATGCAGGAGCTGAAG 60.078 57.895 21.36 0.00 42.74 3.02
3468 3786 6.376864 GCAGGAGCTGAAGATATGTATCTCTA 59.623 42.308 0.00 0.00 38.77 2.43
3469 3787 7.628366 GCAGGAGCTGAAGATATGTATCTCTAC 60.628 44.444 0.00 0.00 38.77 2.59
3472 3790 8.802267 GGAGCTGAAGATATGTATCTCTACTTT 58.198 37.037 0.00 0.00 41.96 2.66
3508 3826 1.371183 GGCTCGCTGGCATGGTATA 59.629 57.895 0.00 0.00 41.37 1.47
3509 3827 0.036010 GGCTCGCTGGCATGGTATAT 60.036 55.000 0.00 0.00 41.37 0.86
3512 3830 1.002430 CTCGCTGGCATGGTATATGGT 59.998 52.381 0.00 0.00 0.00 3.55
3534 4927 5.882557 GGTCAACTAAGAACCATCACATCAT 59.117 40.000 0.00 0.00 0.00 2.45
3535 4928 6.183360 GGTCAACTAAGAACCATCACATCATG 60.183 42.308 0.00 0.00 0.00 3.07
3554 4947 2.032620 TGAGCTCTAATCCCCGAGAAC 58.967 52.381 16.19 0.00 0.00 3.01
3616 5009 1.658686 GCCACCCACAACGTGAACAA 61.659 55.000 0.00 0.00 35.23 2.83
3643 5036 1.833630 CTTGGACTGCCACAGATAGGA 59.166 52.381 0.78 0.00 45.94 2.94
3644 5037 1.951209 TGGACTGCCACAGATAGGAA 58.049 50.000 0.78 0.00 39.92 3.36
3645 5038 2.265367 TGGACTGCCACAGATAGGAAA 58.735 47.619 0.78 0.00 39.92 3.13
3646 5039 2.846206 TGGACTGCCACAGATAGGAAAT 59.154 45.455 0.78 0.00 39.92 2.17
3647 5040 3.266772 TGGACTGCCACAGATAGGAAATT 59.733 43.478 0.78 0.00 39.92 1.82
3693 5086 4.255301 CAAAGCATTTTGCCATGTGGTAT 58.745 39.130 0.35 0.00 46.52 2.73
3702 5095 3.760738 TGCCATGTGGTATGAGAAAACA 58.239 40.909 0.35 0.00 37.57 2.83
3741 5134 0.304705 GCCACTCACAACGTGAACAG 59.695 55.000 0.00 0.00 42.26 3.16
3833 5227 2.134789 TGGTCGTCCTACCTCTTACC 57.865 55.000 0.00 0.00 40.44 2.85
3842 5236 4.340381 GTCCTACCTCTTACCGAATAAGCA 59.660 45.833 2.47 0.00 40.29 3.91
3843 5237 4.957954 TCCTACCTCTTACCGAATAAGCAA 59.042 41.667 2.47 0.00 40.29 3.91
3897 5293 3.121030 CAGGAAACTCAGGCCGCG 61.121 66.667 0.00 0.00 40.21 6.46
4001 5406 2.099921 ACACTTTTAACGTGGCATTGCA 59.900 40.909 11.39 0.00 36.71 4.08
4104 5509 9.426534 TGGAACTCAATAGAATCTATCTCTTGA 57.573 33.333 2.90 3.90 44.45 3.02
4281 5687 4.142513 GCCTTATGTCAGCTTCTTTCCTTG 60.143 45.833 0.00 0.00 0.00 3.61
4292 5698 9.959721 TCAGCTTCTTTCCTTGTAATTATAAGT 57.040 29.630 17.58 0.00 0.00 2.24
4357 5763 3.896888 TCTTGCCATTGGTCACTTCATTT 59.103 39.130 4.26 0.00 0.00 2.32
4601 6019 4.069304 GCAGTTGTATTGTTGTAGGGACA 58.931 43.478 0.00 0.00 0.00 4.02
4695 6113 1.599797 GTGCCGGGTGTAGTGCTTT 60.600 57.895 2.18 0.00 0.00 3.51
4812 6231 8.792830 AGCTAATTGTGTACAGAATATGTTGT 57.207 30.769 17.71 4.87 39.96 3.32
4883 6309 6.598753 TCCAGTTTCTTCACTTAAAGTTCG 57.401 37.500 0.00 0.00 0.00 3.95
5341 6787 3.996150 AAATTATCATGAGCCGCCTTG 57.004 42.857 0.09 0.00 0.00 3.61
5435 6885 1.306482 CTGCCTCTTCTCCTCCCCA 60.306 63.158 0.00 0.00 0.00 4.96
5759 7216 2.621998 GAGGAAGTCGATCGGGTCATTA 59.378 50.000 16.41 0.00 0.00 1.90
5912 7369 2.122167 GGCGACGTCTCAGGAGGAT 61.122 63.158 14.70 0.00 0.00 3.24
5993 7450 3.376935 CTGCCAGTACCCCGAGCTG 62.377 68.421 0.00 0.00 0.00 4.24
5994 7451 3.391382 GCCAGTACCCCGAGCTGT 61.391 66.667 0.00 0.00 0.00 4.40
5995 7452 2.056223 GCCAGTACCCCGAGCTGTA 61.056 63.158 0.00 0.00 0.00 2.74
6091 7569 1.205893 CAAGGAGGAGAAGGAGTTCGG 59.794 57.143 0.00 0.00 37.79 4.30
6167 7661 4.335214 CAATGGGCGGTGATTGGA 57.665 55.556 0.00 0.00 0.00 3.53
6320 8763 8.729805 ACTTTGCAAATTTGATTTTTACTCCA 57.270 26.923 22.31 3.24 0.00 3.86
6369 8863 4.618460 CGAGCAAAGCTTAGTGGAGTAGAA 60.618 45.833 0.00 0.00 39.88 2.10
7371 11794 3.571401 AGCAGCTAATCCATATGCAAACC 59.429 43.478 0.00 0.00 39.34 3.27
7514 12010 2.306512 GGTAACACCCCATTGTCCACTA 59.693 50.000 0.00 0.00 30.04 2.74
7704 12485 3.328931 TCCCTGCCAATCATCTCTTATCC 59.671 47.826 0.00 0.00 0.00 2.59
7919 12706 9.737844 ATGGCCAAACATTAAGAAAATATTGTT 57.262 25.926 10.96 0.00 33.24 2.83
7949 12736 1.002069 TGGAGGGGCTCATTTCATGT 58.998 50.000 0.00 0.00 31.08 3.21
7951 12738 2.580322 TGGAGGGGCTCATTTCATGTAA 59.420 45.455 0.00 0.00 31.08 2.41
7956 12743 5.765510 AGGGGCTCATTTCATGTAATTGTA 58.234 37.500 0.00 0.00 0.00 2.41
7966 12753 9.605955 CATTTCATGTAATTGTAAAGTCGAACA 57.394 29.630 0.00 0.00 0.00 3.18
8064 12851 7.928167 TGATGTAGTTATCTCACAATGGATGAC 59.072 37.037 0.00 0.00 0.00 3.06
8300 13433 7.223582 AGTCTTGAGATCTGCAAATACATAACG 59.776 37.037 0.00 0.00 0.00 3.18
8339 13472 4.081087 ACTTACACGTGATTTCTGGCCTAT 60.081 41.667 25.01 0.00 0.00 2.57
8448 13606 9.743057 CTCTTTATGTAGACCTAACAATCTGAG 57.257 37.037 0.00 0.00 0.00 3.35
8555 13716 5.076182 CCTAGCTGAGAGATCAAGGTGATA 58.924 45.833 0.00 0.00 37.20 2.15
8645 13812 5.801947 GCAACTTGATTGTGTATTCCATGTC 59.198 40.000 0.00 0.00 40.77 3.06
8662 13829 6.881570 TCCATGTCCATACATAGCTATGATG 58.118 40.000 34.86 28.67 44.70 3.07
8891 14199 3.127030 GCCTGCGCTTACTATCAGTTTTT 59.873 43.478 9.73 0.00 0.00 1.94
9008 14318 0.908198 GGCCAGAGTGAACCTGAGAT 59.092 55.000 0.00 0.00 33.65 2.75
9015 14325 5.485620 CAGAGTGAACCTGAGATCATTGAA 58.514 41.667 0.00 0.00 33.65 2.69
9024 14334 5.191426 CCTGAGATCATTGAACCTGATGTT 58.809 41.667 0.00 0.00 40.81 2.71
9025 14335 5.066117 CCTGAGATCATTGAACCTGATGTTG 59.934 44.000 0.00 0.00 37.29 3.33
9026 14336 4.397103 TGAGATCATTGAACCTGATGTTGC 59.603 41.667 0.00 0.00 37.29 4.17
9027 14337 4.338012 AGATCATTGAACCTGATGTTGCA 58.662 39.130 0.00 0.00 37.29 4.08
9043 14357 2.557056 GTTGCATGCTGCCATATGATCT 59.443 45.455 20.33 0.00 44.23 2.75
9130 14451 5.011738 ACTTTATCTTTCTGTCCTTCGTCCA 59.988 40.000 0.00 0.00 0.00 4.02
9140 14461 0.448990 CCTTCGTCCACGTGTATCGA 59.551 55.000 15.65 17.08 42.86 3.59
9274 14595 3.005050 GGTTACCTTGTTGTAAGTTGGCC 59.995 47.826 0.00 0.00 31.66 5.36
9395 14731 8.500753 TTCTACTCTTGCTGTTTGAAAGTAAA 57.499 30.769 0.00 0.00 33.01 2.01
9396 14732 8.677148 TCTACTCTTGCTGTTTGAAAGTAAAT 57.323 30.769 0.00 0.00 33.01 1.40
9397 14733 8.774586 TCTACTCTTGCTGTTTGAAAGTAAATC 58.225 33.333 0.00 0.00 33.01 2.17
9398 14734 7.333528 ACTCTTGCTGTTTGAAAGTAAATCA 57.666 32.000 0.00 0.00 33.01 2.57
9399 14735 7.945134 ACTCTTGCTGTTTGAAAGTAAATCAT 58.055 30.769 0.00 0.00 33.01 2.45
9400 14736 8.416329 ACTCTTGCTGTTTGAAAGTAAATCATT 58.584 29.630 0.00 0.00 33.01 2.57
9401 14737 9.252962 CTCTTGCTGTTTGAAAGTAAATCATTT 57.747 29.630 0.00 0.00 33.01 2.32
9402 14738 9.598517 TCTTGCTGTTTGAAAGTAAATCATTTT 57.401 25.926 0.00 0.00 33.01 1.82
9403 14739 9.640974 CTTGCTGTTTGAAAGTAAATCATTTTG 57.359 29.630 0.00 0.00 0.00 2.44
9404 14740 8.715191 TGCTGTTTGAAAGTAAATCATTTTGT 57.285 26.923 0.00 0.00 0.00 2.83
9405 14741 9.160496 TGCTGTTTGAAAGTAAATCATTTTGTT 57.840 25.926 0.00 0.00 0.00 2.83
9619 15000 2.257371 CGCGACGAGGTCCTCAAA 59.743 61.111 19.15 0.00 0.00 2.69
9800 15181 3.691342 CAGCGAACCCGGACTCCA 61.691 66.667 0.73 0.00 36.06 3.86
9829 15210 2.184167 CGACAACAACAACCGCCCT 61.184 57.895 0.00 0.00 0.00 5.19
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.809601 ACAATCGACGAGCACGGC 60.810 61.111 8.74 3.26 45.02 5.68
1 2 1.443702 TCACAATCGACGAGCACGG 60.444 57.895 8.74 0.00 44.46 4.94
3 4 0.666274 TGGTCACAATCGACGAGCAC 60.666 55.000 3.01 0.00 36.73 4.40
5 6 1.674611 CGTGGTCACAATCGACGAGC 61.675 60.000 3.01 0.00 38.81 5.03
6 7 1.674611 GCGTGGTCACAATCGACGAG 61.675 60.000 3.01 0.00 38.81 4.18
9 10 2.726691 CGGCGTGGTCACAATCGAC 61.727 63.158 0.00 0.00 35.03 4.20
10 11 2.423290 TTCGGCGTGGTCACAATCGA 62.423 55.000 6.85 0.00 0.00 3.59
12 13 1.495951 GTTCGGCGTGGTCACAATC 59.504 57.895 6.85 0.00 0.00 2.67
13 14 2.314647 CGTTCGGCGTGGTCACAAT 61.315 57.895 6.85 0.00 35.54 2.71
14 15 2.962786 CGTTCGGCGTGGTCACAA 60.963 61.111 6.85 0.00 35.54 3.33
15 16 4.953868 CCGTTCGGCGTGGTCACA 62.954 66.667 6.85 0.00 39.32 3.58
18 19 3.067480 TATCCCGTTCGGCGTGGTC 62.067 63.158 6.85 0.00 39.32 4.02
19 20 3.069946 TATCCCGTTCGGCGTGGT 61.070 61.111 6.85 0.00 39.32 4.16
20 21 2.584143 GTATCCCGTTCGGCGTGG 60.584 66.667 6.85 7.72 39.32 4.94
21 22 2.952783 CGTATCCCGTTCGGCGTG 60.953 66.667 6.85 0.00 39.32 5.34
22 23 4.860261 GCGTATCCCGTTCGGCGT 62.860 66.667 6.85 0.00 39.32 5.68
25 26 4.936823 CCGGCGTATCCCGTTCGG 62.937 72.222 6.01 4.08 46.71 4.30
31 32 4.910585 CAGTGGCCGGCGTATCCC 62.911 72.222 22.54 5.65 0.00 3.85
32 33 4.910585 CCAGTGGCCGGCGTATCC 62.911 72.222 22.54 6.51 0.00 2.59
63 64 1.402968 CACCATGATACAAGCAGTGGC 59.597 52.381 0.00 0.00 41.61 5.01
64 65 1.402968 GCACCATGATACAAGCAGTGG 59.597 52.381 0.00 0.00 0.00 4.00
65 66 2.086094 TGCACCATGATACAAGCAGTG 58.914 47.619 0.00 0.00 0.00 3.66
66 67 2.086869 GTGCACCATGATACAAGCAGT 58.913 47.619 5.22 0.00 32.03 4.40
67 68 1.063027 CGTGCACCATGATACAAGCAG 59.937 52.381 12.15 0.00 32.03 4.24
68 69 1.085893 CGTGCACCATGATACAAGCA 58.914 50.000 12.15 0.00 0.00 3.91
69 70 1.328680 CTCGTGCACCATGATACAAGC 59.671 52.381 12.15 0.00 0.00 4.01
70 71 1.328680 GCTCGTGCACCATGATACAAG 59.671 52.381 12.15 0.00 39.41 3.16
71 72 1.338579 TGCTCGTGCACCATGATACAA 60.339 47.619 12.15 0.00 45.31 2.41
72 73 0.248843 TGCTCGTGCACCATGATACA 59.751 50.000 12.15 1.99 45.31 2.29
73 74 3.064079 TGCTCGTGCACCATGATAC 57.936 52.632 12.15 0.00 45.31 2.24
114 115 3.762247 CAAGGTGCCAATGCGGGG 61.762 66.667 0.00 0.00 41.78 5.73
115 116 2.676121 TCAAGGTGCCAATGCGGG 60.676 61.111 0.00 0.00 41.78 6.13
116 117 2.568090 GTCAAGGTGCCAATGCGG 59.432 61.111 0.00 0.00 41.78 5.69
117 118 2.568090 GGTCAAGGTGCCAATGCG 59.432 61.111 0.00 0.00 41.78 4.73
118 119 2.568090 CGGTCAAGGTGCCAATGC 59.432 61.111 0.00 0.00 38.26 3.56
119 120 1.526575 AAGCGGTCAAGGTGCCAATG 61.527 55.000 0.00 0.00 0.00 2.82
120 121 0.037590 TAAGCGGTCAAGGTGCCAAT 59.962 50.000 0.00 0.00 0.00 3.16
121 122 0.037590 ATAAGCGGTCAAGGTGCCAA 59.962 50.000 0.00 0.00 0.00 4.52
122 123 0.037590 AATAAGCGGTCAAGGTGCCA 59.962 50.000 0.00 0.00 0.00 4.92
123 124 0.733150 GAATAAGCGGTCAAGGTGCC 59.267 55.000 0.00 0.00 0.00 5.01
124 125 0.733150 GGAATAAGCGGTCAAGGTGC 59.267 55.000 0.00 0.00 0.00 5.01
125 126 1.379527 GGGAATAAGCGGTCAAGGTG 58.620 55.000 0.00 0.00 0.00 4.00
126 127 0.255033 GGGGAATAAGCGGTCAAGGT 59.745 55.000 0.00 0.00 0.00 3.50
127 128 0.546598 AGGGGAATAAGCGGTCAAGG 59.453 55.000 0.00 0.00 0.00 3.61
128 129 1.209504 TGAGGGGAATAAGCGGTCAAG 59.790 52.381 0.00 0.00 0.00 3.02
129 130 1.281419 TGAGGGGAATAAGCGGTCAA 58.719 50.000 0.00 0.00 0.00 3.18
130 131 1.416401 GATGAGGGGAATAAGCGGTCA 59.584 52.381 0.00 0.00 0.00 4.02
131 132 1.605712 CGATGAGGGGAATAAGCGGTC 60.606 57.143 0.00 0.00 0.00 4.79
132 133 0.393077 CGATGAGGGGAATAAGCGGT 59.607 55.000 0.00 0.00 0.00 5.68
133 134 0.951040 GCGATGAGGGGAATAAGCGG 60.951 60.000 0.00 0.00 0.00 5.52
134 135 0.951040 GGCGATGAGGGGAATAAGCG 60.951 60.000 0.00 0.00 0.00 4.68
135 136 0.398318 AGGCGATGAGGGGAATAAGC 59.602 55.000 0.00 0.00 0.00 3.09
136 137 1.271054 CCAGGCGATGAGGGGAATAAG 60.271 57.143 0.00 0.00 0.00 1.73
137 138 0.764890 CCAGGCGATGAGGGGAATAA 59.235 55.000 0.00 0.00 0.00 1.40
138 139 1.127567 CCCAGGCGATGAGGGGAATA 61.128 60.000 0.00 0.00 43.57 1.75
139 140 2.455565 CCCAGGCGATGAGGGGAAT 61.456 63.158 0.00 0.00 43.57 3.01
140 141 3.089874 CCCAGGCGATGAGGGGAA 61.090 66.667 0.00 0.00 43.57 3.97
143 144 3.554342 CTCCCCAGGCGATGAGGG 61.554 72.222 0.00 0.00 42.44 4.30
144 145 4.247380 GCTCCCCAGGCGATGAGG 62.247 72.222 0.00 0.00 0.00 3.86
145 146 3.160047 AGCTCCCCAGGCGATGAG 61.160 66.667 0.00 0.00 34.52 2.90
146 147 3.157252 GAGCTCCCCAGGCGATGA 61.157 66.667 0.87 0.00 34.52 2.92
147 148 3.160047 AGAGCTCCCCAGGCGATG 61.160 66.667 10.93 0.00 34.52 3.84
148 149 2.841988 GAGAGCTCCCCAGGCGAT 60.842 66.667 10.93 0.00 34.52 4.58
149 150 3.686098 ATGAGAGCTCCCCAGGCGA 62.686 63.158 10.93 0.00 34.52 5.54
150 151 3.160047 ATGAGAGCTCCCCAGGCG 61.160 66.667 10.93 0.00 34.52 5.52
151 152 2.373707 ACATGAGAGCTCCCCAGGC 61.374 63.158 10.93 0.00 0.00 4.85
152 153 1.270414 ACACATGAGAGCTCCCCAGG 61.270 60.000 10.93 13.06 0.00 4.45
153 154 0.107800 CACACATGAGAGCTCCCCAG 60.108 60.000 10.93 0.89 0.00 4.45
154 155 1.985614 CACACATGAGAGCTCCCCA 59.014 57.895 10.93 9.57 0.00 4.96
155 156 1.451028 GCACACATGAGAGCTCCCC 60.451 63.158 10.93 3.19 0.00 4.81
156 157 0.461693 GAGCACACATGAGAGCTCCC 60.462 60.000 24.69 0.00 45.79 4.30
157 158 3.062585 GAGCACACATGAGAGCTCC 57.937 57.895 24.69 11.77 45.79 4.70
159 160 0.249676 CCTGAGCACACATGAGAGCT 59.750 55.000 14.29 14.29 40.60 4.09
160 161 0.743701 CCCTGAGCACACATGAGAGC 60.744 60.000 0.00 1.13 0.00 4.09
161 162 0.900421 TCCCTGAGCACACATGAGAG 59.100 55.000 0.00 0.00 0.00 3.20
162 163 1.277273 CTTCCCTGAGCACACATGAGA 59.723 52.381 0.00 0.00 0.00 3.27
163 164 1.277273 TCTTCCCTGAGCACACATGAG 59.723 52.381 0.00 0.00 0.00 2.90
164 165 1.277273 CTCTTCCCTGAGCACACATGA 59.723 52.381 0.00 0.00 0.00 3.07
165 166 1.277273 TCTCTTCCCTGAGCACACATG 59.723 52.381 0.00 0.00 34.29 3.21
166 167 1.277557 GTCTCTTCCCTGAGCACACAT 59.722 52.381 0.00 0.00 34.29 3.21
167 168 0.681733 GTCTCTTCCCTGAGCACACA 59.318 55.000 0.00 0.00 34.29 3.72
168 169 0.036858 GGTCTCTTCCCTGAGCACAC 60.037 60.000 0.00 0.00 34.29 3.82
169 170 1.536073 CGGTCTCTTCCCTGAGCACA 61.536 60.000 0.00 0.00 34.29 4.57
170 171 1.216710 CGGTCTCTTCCCTGAGCAC 59.783 63.158 0.00 0.00 34.29 4.40
171 172 0.541998 TTCGGTCTCTTCCCTGAGCA 60.542 55.000 0.00 0.00 34.29 4.26
172 173 0.108567 GTTCGGTCTCTTCCCTGAGC 60.109 60.000 0.00 0.00 34.29 4.26
173 174 0.171455 CGTTCGGTCTCTTCCCTGAG 59.829 60.000 0.00 0.00 35.52 3.35
174 175 0.251033 TCGTTCGGTCTCTTCCCTGA 60.251 55.000 0.00 0.00 0.00 3.86
175 176 0.171455 CTCGTTCGGTCTCTTCCCTG 59.829 60.000 0.00 0.00 0.00 4.45
176 177 0.037877 TCTCGTTCGGTCTCTTCCCT 59.962 55.000 0.00 0.00 0.00 4.20
177 178 0.886563 TTCTCGTTCGGTCTCTTCCC 59.113 55.000 0.00 0.00 0.00 3.97
178 179 2.943449 ATTCTCGTTCGGTCTCTTCC 57.057 50.000 0.00 0.00 0.00 3.46
179 180 3.243134 CCCTATTCTCGTTCGGTCTCTTC 60.243 52.174 0.00 0.00 0.00 2.87
180 181 2.688958 CCCTATTCTCGTTCGGTCTCTT 59.311 50.000 0.00 0.00 0.00 2.85
181 182 2.299521 CCCTATTCTCGTTCGGTCTCT 58.700 52.381 0.00 0.00 0.00 3.10
182 183 1.337387 CCCCTATTCTCGTTCGGTCTC 59.663 57.143 0.00 0.00 0.00 3.36
183 184 1.400737 CCCCTATTCTCGTTCGGTCT 58.599 55.000 0.00 0.00 0.00 3.85
184 185 0.249363 GCCCCTATTCTCGTTCGGTC 60.249 60.000 0.00 0.00 0.00 4.79
185 186 1.821258 GCCCCTATTCTCGTTCGGT 59.179 57.895 0.00 0.00 0.00 4.69
186 187 1.299926 CGCCCCTATTCTCGTTCGG 60.300 63.158 0.00 0.00 0.00 4.30
187 188 0.870307 CACGCCCCTATTCTCGTTCG 60.870 60.000 0.00 0.00 32.38 3.95
188 189 0.458669 TCACGCCCCTATTCTCGTTC 59.541 55.000 0.00 0.00 32.38 3.95
189 190 0.175073 GTCACGCCCCTATTCTCGTT 59.825 55.000 0.00 0.00 32.38 3.85
190 191 1.673808 GGTCACGCCCCTATTCTCGT 61.674 60.000 0.00 0.00 35.35 4.18
191 192 1.067582 GGTCACGCCCCTATTCTCG 59.932 63.158 0.00 0.00 0.00 4.04
192 193 1.067582 CGGTCACGCCCCTATTCTC 59.932 63.158 0.00 0.00 0.00 2.87
193 194 3.217231 CGGTCACGCCCCTATTCT 58.783 61.111 0.00 0.00 0.00 2.40
208 209 0.790207 CGAATTCCATACCATCGCGG 59.210 55.000 6.13 0.00 42.50 6.46
209 210 1.497991 ACGAATTCCATACCATCGCG 58.502 50.000 0.00 0.00 37.03 5.87
210 211 3.963383 AAACGAATTCCATACCATCGC 57.037 42.857 0.00 0.00 37.03 4.58
211 212 5.027737 CACAAAACGAATTCCATACCATCG 58.972 41.667 0.00 0.00 39.30 3.84
212 213 6.189677 TCACAAAACGAATTCCATACCATC 57.810 37.500 0.00 0.00 0.00 3.51
213 214 6.376864 TGATCACAAAACGAATTCCATACCAT 59.623 34.615 0.00 0.00 0.00 3.55
214 215 5.707764 TGATCACAAAACGAATTCCATACCA 59.292 36.000 0.00 0.00 0.00 3.25
215 216 6.189677 TGATCACAAAACGAATTCCATACC 57.810 37.500 0.00 0.00 0.00 2.73
216 217 7.250569 ACATGATCACAAAACGAATTCCATAC 58.749 34.615 0.00 0.00 0.00 2.39
217 218 7.389803 ACATGATCACAAAACGAATTCCATA 57.610 32.000 0.00 0.00 0.00 2.74
218 219 6.271488 ACATGATCACAAAACGAATTCCAT 57.729 33.333 0.00 0.00 0.00 3.41
219 220 5.703978 ACATGATCACAAAACGAATTCCA 57.296 34.783 0.00 0.00 0.00 3.53
220 221 5.732647 CGTACATGATCACAAAACGAATTCC 59.267 40.000 13.48 0.00 34.10 3.01
221 222 6.530567 TCGTACATGATCACAAAACGAATTC 58.469 36.000 17.12 0.00 36.41 2.17
222 223 6.474819 TCGTACATGATCACAAAACGAATT 57.525 33.333 17.12 0.00 36.41 2.17
223 224 6.507929 CGATCGTACATGATCACAAAACGAAT 60.508 38.462 20.98 13.22 44.02 3.34
224 225 5.220135 CGATCGTACATGATCACAAAACGAA 60.220 40.000 20.98 10.30 44.02 3.85
225 226 4.264380 CGATCGTACATGATCACAAAACGA 59.736 41.667 19.99 19.99 44.02 3.85
226 227 4.264380 TCGATCGTACATGATCACAAAACG 59.736 41.667 15.94 6.47 44.02 3.60
227 228 5.276395 CCTCGATCGTACATGATCACAAAAC 60.276 44.000 15.94 0.00 44.02 2.43
228 229 4.803613 CCTCGATCGTACATGATCACAAAA 59.196 41.667 15.94 0.00 44.02 2.44
229 230 4.097286 TCCTCGATCGTACATGATCACAAA 59.903 41.667 15.94 0.00 44.02 2.83
230 231 3.630312 TCCTCGATCGTACATGATCACAA 59.370 43.478 15.94 0.00 44.02 3.33
231 232 3.211045 TCCTCGATCGTACATGATCACA 58.789 45.455 15.94 0.00 44.02 3.58
232 233 3.898517 TCCTCGATCGTACATGATCAC 57.101 47.619 15.94 0.00 44.02 3.06
233 234 5.222631 CAAATCCTCGATCGTACATGATCA 58.777 41.667 15.94 0.00 44.02 2.92
234 235 4.090642 GCAAATCCTCGATCGTACATGATC 59.909 45.833 15.94 1.93 41.10 2.92
235 236 3.990469 GCAAATCCTCGATCGTACATGAT 59.010 43.478 15.94 8.15 0.00 2.45
236 237 3.181480 TGCAAATCCTCGATCGTACATGA 60.181 43.478 15.94 6.18 0.00 3.07
237 238 3.060272 GTGCAAATCCTCGATCGTACATG 60.060 47.826 15.94 9.12 0.00 3.21
238 239 3.123804 GTGCAAATCCTCGATCGTACAT 58.876 45.455 15.94 2.38 0.00 2.29
239 240 2.094442 TGTGCAAATCCTCGATCGTACA 60.094 45.455 15.94 0.00 0.00 2.90
240 241 2.281762 GTGTGCAAATCCTCGATCGTAC 59.718 50.000 15.94 2.86 0.00 3.67
241 242 2.094442 TGTGTGCAAATCCTCGATCGTA 60.094 45.455 15.94 2.42 0.00 3.43
242 243 1.337728 TGTGTGCAAATCCTCGATCGT 60.338 47.619 15.94 0.00 0.00 3.73
243 244 1.325640 CTGTGTGCAAATCCTCGATCG 59.674 52.381 9.36 9.36 0.00 3.69
244 245 2.349886 GTCTGTGTGCAAATCCTCGATC 59.650 50.000 0.00 0.00 0.00 3.69
245 246 2.289631 TGTCTGTGTGCAAATCCTCGAT 60.290 45.455 0.00 0.00 0.00 3.59
246 247 1.069978 TGTCTGTGTGCAAATCCTCGA 59.930 47.619 0.00 0.00 0.00 4.04
247 248 1.195448 GTGTCTGTGTGCAAATCCTCG 59.805 52.381 0.00 0.00 0.00 4.63
248 249 2.221169 TGTGTCTGTGTGCAAATCCTC 58.779 47.619 0.00 0.00 0.00 3.71
249 250 2.346766 TGTGTCTGTGTGCAAATCCT 57.653 45.000 0.00 0.00 0.00 3.24
250 251 3.435105 TTTGTGTCTGTGTGCAAATCC 57.565 42.857 0.00 0.00 0.00 3.01
251 252 4.268405 CCTTTTTGTGTCTGTGTGCAAATC 59.732 41.667 0.00 0.00 31.99 2.17
252 253 4.183101 CCTTTTTGTGTCTGTGTGCAAAT 58.817 39.130 0.00 0.00 31.99 2.32
253 254 3.583806 CCTTTTTGTGTCTGTGTGCAAA 58.416 40.909 0.00 0.00 0.00 3.68
254 255 2.094286 CCCTTTTTGTGTCTGTGTGCAA 60.094 45.455 0.00 0.00 0.00 4.08
255 256 1.476085 CCCTTTTTGTGTCTGTGTGCA 59.524 47.619 0.00 0.00 0.00 4.57
256 257 1.802508 GCCCTTTTTGTGTCTGTGTGC 60.803 52.381 0.00 0.00 0.00 4.57
257 258 1.476085 TGCCCTTTTTGTGTCTGTGTG 59.524 47.619 0.00 0.00 0.00 3.82
258 259 1.750778 CTGCCCTTTTTGTGTCTGTGT 59.249 47.619 0.00 0.00 0.00 3.72
259 260 2.023673 TCTGCCCTTTTTGTGTCTGTG 58.976 47.619 0.00 0.00 0.00 3.66
260 261 2.435372 TCTGCCCTTTTTGTGTCTGT 57.565 45.000 0.00 0.00 0.00 3.41
261 262 6.543465 TCATATATCTGCCCTTTTTGTGTCTG 59.457 38.462 0.00 0.00 0.00 3.51
262 263 6.662755 TCATATATCTGCCCTTTTTGTGTCT 58.337 36.000 0.00 0.00 0.00 3.41
263 264 6.942532 TCATATATCTGCCCTTTTTGTGTC 57.057 37.500 0.00 0.00 0.00 3.67
264 265 7.902920 AATCATATATCTGCCCTTTTTGTGT 57.097 32.000 0.00 0.00 0.00 3.72
265 266 9.252962 GAAAATCATATATCTGCCCTTTTTGTG 57.747 33.333 0.00 0.00 0.00 3.33
266 267 9.205513 AGAAAATCATATATCTGCCCTTTTTGT 57.794 29.630 0.00 0.00 0.00 2.83
270 271 8.645110 CCAAAGAAAATCATATATCTGCCCTTT 58.355 33.333 0.00 0.00 0.00 3.11
271 272 8.006564 TCCAAAGAAAATCATATATCTGCCCTT 58.993 33.333 0.00 0.00 0.00 3.95
272 273 7.529555 TCCAAAGAAAATCATATATCTGCCCT 58.470 34.615 0.00 0.00 0.00 5.19
273 274 7.449704 ACTCCAAAGAAAATCATATATCTGCCC 59.550 37.037 0.00 0.00 0.00 5.36
274 275 8.401490 ACTCCAAAGAAAATCATATATCTGCC 57.599 34.615 0.00 0.00 0.00 4.85
282 283 8.730680 GCTGTTTCTACTCCAAAGAAAATCATA 58.269 33.333 0.17 0.00 42.83 2.15
283 284 7.231317 TGCTGTTTCTACTCCAAAGAAAATCAT 59.769 33.333 0.17 0.00 42.83 2.45
284 285 6.545666 TGCTGTTTCTACTCCAAAGAAAATCA 59.454 34.615 0.17 0.00 42.83 2.57
285 286 6.970484 TGCTGTTTCTACTCCAAAGAAAATC 58.030 36.000 0.17 0.00 42.83 2.17
286 287 6.959639 TGCTGTTTCTACTCCAAAGAAAAT 57.040 33.333 0.17 0.00 42.83 1.82
287 288 6.321181 ACATGCTGTTTCTACTCCAAAGAAAA 59.679 34.615 0.00 0.00 42.83 2.29
288 289 5.827797 ACATGCTGTTTCTACTCCAAAGAAA 59.172 36.000 0.00 0.00 39.91 2.52
289 290 5.376625 ACATGCTGTTTCTACTCCAAAGAA 58.623 37.500 0.00 0.00 0.00 2.52
290 291 4.973168 ACATGCTGTTTCTACTCCAAAGA 58.027 39.130 0.00 0.00 0.00 2.52
291 292 4.756642 TGACATGCTGTTTCTACTCCAAAG 59.243 41.667 0.00 0.00 0.00 2.77
292 293 4.713553 TGACATGCTGTTTCTACTCCAAA 58.286 39.130 0.00 0.00 0.00 3.28
293 294 4.040339 TCTGACATGCTGTTTCTACTCCAA 59.960 41.667 0.00 0.00 0.00 3.53
294 295 3.578282 TCTGACATGCTGTTTCTACTCCA 59.422 43.478 0.00 0.00 0.00 3.86
295 296 4.193826 TCTGACATGCTGTTTCTACTCC 57.806 45.455 0.00 0.00 0.00 3.85
296 297 6.454848 CGAAATCTGACATGCTGTTTCTACTC 60.455 42.308 0.00 0.00 0.00 2.59
297 298 5.349817 CGAAATCTGACATGCTGTTTCTACT 59.650 40.000 0.00 0.00 0.00 2.57
298 299 5.348724 TCGAAATCTGACATGCTGTTTCTAC 59.651 40.000 0.00 0.00 0.00 2.59
299 300 5.478407 TCGAAATCTGACATGCTGTTTCTA 58.522 37.500 0.00 0.00 0.00 2.10
300 301 4.318332 TCGAAATCTGACATGCTGTTTCT 58.682 39.130 0.00 0.00 0.00 2.52
301 302 4.668576 TCGAAATCTGACATGCTGTTTC 57.331 40.909 0.00 0.00 0.00 2.78
302 303 4.142534 CCATCGAAATCTGACATGCTGTTT 60.143 41.667 0.00 0.00 0.00 2.83
303 304 3.376234 CCATCGAAATCTGACATGCTGTT 59.624 43.478 0.00 0.00 0.00 3.16
304 305 2.941064 CCATCGAAATCTGACATGCTGT 59.059 45.455 0.00 0.00 0.00 4.40
305 306 2.289820 CCCATCGAAATCTGACATGCTG 59.710 50.000 0.00 0.00 0.00 4.41
306 307 2.092753 ACCCATCGAAATCTGACATGCT 60.093 45.455 0.00 0.00 0.00 3.79
307 308 2.292267 ACCCATCGAAATCTGACATGC 58.708 47.619 0.00 0.00 0.00 4.06
308 309 3.065786 CCAACCCATCGAAATCTGACATG 59.934 47.826 0.00 0.00 0.00 3.21
309 310 3.282021 CCAACCCATCGAAATCTGACAT 58.718 45.455 0.00 0.00 0.00 3.06
310 311 2.710377 CCAACCCATCGAAATCTGACA 58.290 47.619 0.00 0.00 0.00 3.58
311 312 1.401905 GCCAACCCATCGAAATCTGAC 59.598 52.381 0.00 0.00 0.00 3.51
312 313 1.004161 TGCCAACCCATCGAAATCTGA 59.996 47.619 0.00 0.00 0.00 3.27
313 314 1.402968 CTGCCAACCCATCGAAATCTG 59.597 52.381 0.00 0.00 0.00 2.90
314 315 1.683011 CCTGCCAACCCATCGAAATCT 60.683 52.381 0.00 0.00 0.00 2.40
315 316 0.740737 CCTGCCAACCCATCGAAATC 59.259 55.000 0.00 0.00 0.00 2.17
316 317 1.322538 GCCTGCCAACCCATCGAAAT 61.323 55.000 0.00 0.00 0.00 2.17
317 318 1.976474 GCCTGCCAACCCATCGAAA 60.976 57.895 0.00 0.00 0.00 3.46
318 319 2.361104 GCCTGCCAACCCATCGAA 60.361 61.111 0.00 0.00 0.00 3.71
319 320 4.424711 GGCCTGCCAACCCATCGA 62.425 66.667 2.58 0.00 35.81 3.59
320 321 4.738998 TGGCCTGCCAACCCATCG 62.739 66.667 8.75 0.00 44.12 3.84
321 322 2.757099 CTGGCCTGCCAACCCATC 60.757 66.667 12.66 0.00 46.63 3.51
322 323 2.172229 ATTCTGGCCTGCCAACCCAT 62.172 55.000 12.66 0.00 46.63 4.00
323 324 1.505151 TATTCTGGCCTGCCAACCCA 61.505 55.000 12.66 0.00 46.63 4.51
324 325 0.324275 TTATTCTGGCCTGCCAACCC 60.324 55.000 12.66 0.00 46.63 4.11
325 326 1.780503 ATTATTCTGGCCTGCCAACC 58.219 50.000 12.66 0.00 46.63 3.77
326 327 2.497273 ACAATTATTCTGGCCTGCCAAC 59.503 45.455 12.66 0.00 46.63 3.77
327 328 2.818921 ACAATTATTCTGGCCTGCCAA 58.181 42.857 12.66 0.00 46.63 4.52
328 329 2.530460 ACAATTATTCTGGCCTGCCA 57.470 45.000 10.98 10.98 45.02 4.92
329 330 4.262164 CCAATACAATTATTCTGGCCTGCC 60.262 45.833 3.32 0.00 0.00 4.85
330 331 4.262164 CCCAATACAATTATTCTGGCCTGC 60.262 45.833 3.32 0.00 0.00 4.85
331 332 4.262164 GCCCAATACAATTATTCTGGCCTG 60.262 45.833 3.32 2.92 37.00 4.85
332 333 3.897505 GCCCAATACAATTATTCTGGCCT 59.102 43.478 3.32 0.00 37.00 5.19
333 334 3.006859 GGCCCAATACAATTATTCTGGCC 59.993 47.826 13.75 13.75 46.20 5.36
334 335 3.897505 AGGCCCAATACAATTATTCTGGC 59.102 43.478 0.00 0.00 39.70 4.85
335 336 5.183904 GCTAGGCCCAATACAATTATTCTGG 59.816 44.000 0.00 0.00 0.00 3.86
336 337 6.006449 AGCTAGGCCCAATACAATTATTCTG 58.994 40.000 0.00 0.00 0.00 3.02
337 338 6.206180 AGCTAGGCCCAATACAATTATTCT 57.794 37.500 0.00 0.00 0.00 2.40
338 339 7.119846 CACTAGCTAGGCCCAATACAATTATTC 59.880 40.741 24.35 0.00 0.00 1.75
339 340 6.942576 CACTAGCTAGGCCCAATACAATTATT 59.057 38.462 24.35 0.00 0.00 1.40
340 341 6.476378 CACTAGCTAGGCCCAATACAATTAT 58.524 40.000 24.35 0.00 0.00 1.28
341 342 5.221843 CCACTAGCTAGGCCCAATACAATTA 60.222 44.000 24.35 0.00 0.00 1.40
342 343 4.446311 CCACTAGCTAGGCCCAATACAATT 60.446 45.833 24.35 0.00 0.00 2.32
343 344 3.073062 CCACTAGCTAGGCCCAATACAAT 59.927 47.826 24.35 0.00 0.00 2.71
344 345 2.438021 CCACTAGCTAGGCCCAATACAA 59.562 50.000 24.35 0.00 0.00 2.41
345 346 2.047061 CCACTAGCTAGGCCCAATACA 58.953 52.381 24.35 0.00 0.00 2.29
346 347 2.037381 GACCACTAGCTAGGCCCAATAC 59.963 54.545 24.35 4.41 0.00 1.89
347 348 2.090719 AGACCACTAGCTAGGCCCAATA 60.091 50.000 24.35 0.00 0.00 1.90
348 349 1.132500 GACCACTAGCTAGGCCCAAT 58.868 55.000 24.35 4.02 0.00 3.16
349 350 0.042731 AGACCACTAGCTAGGCCCAA 59.957 55.000 24.35 0.00 0.00 4.12
350 351 0.397254 GAGACCACTAGCTAGGCCCA 60.397 60.000 24.35 0.00 0.00 5.36
351 352 1.116536 GGAGACCACTAGCTAGGCCC 61.117 65.000 24.35 11.49 0.00 5.80
352 353 0.397254 TGGAGACCACTAGCTAGGCC 60.397 60.000 24.35 14.62 0.00 5.19
353 354 3.209091 TGGAGACCACTAGCTAGGC 57.791 57.895 24.35 10.71 0.00 3.93
366 367 1.068588 CACAACGAAGTCTGGTGGAGA 59.931 52.381 0.00 0.00 45.00 3.71
367 368 1.502231 CACAACGAAGTCTGGTGGAG 58.498 55.000 0.00 0.00 45.00 3.86
368 369 0.531974 GCACAACGAAGTCTGGTGGA 60.532 55.000 0.00 0.00 45.00 4.02
369 370 1.507141 GGCACAACGAAGTCTGGTGG 61.507 60.000 0.00 0.00 45.00 4.61
370 371 0.532862 AGGCACAACGAAGTCTGGTG 60.533 55.000 0.00 0.00 45.00 4.17
371 372 0.532862 CAGGCACAACGAAGTCTGGT 60.533 55.000 0.00 0.00 45.00 4.00
372 373 1.845809 GCAGGCACAACGAAGTCTGG 61.846 60.000 0.00 0.00 45.00 3.86
373 374 1.571460 GCAGGCACAACGAAGTCTG 59.429 57.895 0.00 0.00 45.00 3.51
374 375 1.598130 GGCAGGCACAACGAAGTCT 60.598 57.895 0.00 0.00 45.00 3.24
375 376 2.946762 GGCAGGCACAACGAAGTC 59.053 61.111 0.00 0.00 45.00 3.01
377 378 2.664851 TCGGCAGGCACAACGAAG 60.665 61.111 0.00 0.00 31.79 3.79
378 379 2.664851 CTCGGCAGGCACAACGAA 60.665 61.111 0.00 0.00 34.70 3.85
379 380 3.573772 CTCTCGGCAGGCACAACGA 62.574 63.158 0.00 0.00 0.00 3.85
380 381 3.114616 CTCTCGGCAGGCACAACG 61.115 66.667 0.00 0.00 0.00 4.10
381 382 2.743928 CCTCTCGGCAGGCACAAC 60.744 66.667 0.00 0.00 0.00 3.32
391 392 2.408050 CGAATTATTCAGGCCTCTCGG 58.592 52.381 0.00 0.00 0.00 4.63
392 393 2.224066 ACCGAATTATTCAGGCCTCTCG 60.224 50.000 0.00 2.70 0.00 4.04
393 394 3.394719 GACCGAATTATTCAGGCCTCTC 58.605 50.000 0.00 0.00 0.00 3.20
394 395 2.104963 GGACCGAATTATTCAGGCCTCT 59.895 50.000 0.00 0.00 0.00 3.69
395 396 2.495084 GGACCGAATTATTCAGGCCTC 58.505 52.381 0.00 2.97 0.00 4.70
396 397 1.202651 CGGACCGAATTATTCAGGCCT 60.203 52.381 8.64 0.00 0.00 5.19
397 398 1.226746 CGGACCGAATTATTCAGGCC 58.773 55.000 8.64 2.99 0.00 5.19
398 399 1.226746 CCGGACCGAATTATTCAGGC 58.773 55.000 17.49 1.25 0.00 4.85
399 400 1.226746 GCCGGACCGAATTATTCAGG 58.773 55.000 17.49 9.42 0.00 3.86
400 401 1.202651 AGGCCGGACCGAATTATTCAG 60.203 52.381 17.49 0.00 46.52 3.02
401 402 0.834612 AGGCCGGACCGAATTATTCA 59.165 50.000 17.49 0.00 46.52 2.57
402 403 2.804527 GTTAGGCCGGACCGAATTATTC 59.195 50.000 17.49 0.00 46.52 1.75
403 404 2.171027 TGTTAGGCCGGACCGAATTATT 59.829 45.455 17.49 0.00 46.52 1.40
404 405 1.764134 TGTTAGGCCGGACCGAATTAT 59.236 47.619 17.49 0.00 46.52 1.28
405 406 1.193323 TGTTAGGCCGGACCGAATTA 58.807 50.000 17.49 1.09 46.52 1.40
406 407 0.325602 TTGTTAGGCCGGACCGAATT 59.674 50.000 17.49 2.15 46.52 2.17
407 408 0.325602 TTTGTTAGGCCGGACCGAAT 59.674 50.000 17.49 2.87 46.52 3.34
408 409 0.603439 GTTTGTTAGGCCGGACCGAA 60.603 55.000 17.49 4.86 46.52 4.30
409 410 1.004679 GTTTGTTAGGCCGGACCGA 60.005 57.895 17.49 0.00 46.52 4.69
410 411 1.296056 CTGTTTGTTAGGCCGGACCG 61.296 60.000 1.76 6.99 46.52 4.79
411 412 0.250597 ACTGTTTGTTAGGCCGGACC 60.251 55.000 1.76 4.96 39.61 4.46
412 413 2.344025 CTACTGTTTGTTAGGCCGGAC 58.656 52.381 5.05 0.00 0.00 4.79
413 414 1.276989 CCTACTGTTTGTTAGGCCGGA 59.723 52.381 5.05 0.00 0.00 5.14
414 415 1.734163 CCTACTGTTTGTTAGGCCGG 58.266 55.000 0.00 0.00 0.00 6.13
415 416 1.084289 GCCTACTGTTTGTTAGGCCG 58.916 55.000 8.23 0.00 46.92 6.13
418 419 3.187842 GGTTTCGCCTACTGTTTGTTAGG 59.812 47.826 0.00 0.00 0.00 2.69
419 420 4.400036 GGTTTCGCCTACTGTTTGTTAG 57.600 45.455 0.00 0.00 0.00 2.34
429 430 6.861593 CCGCTAGGATTAGGTTTCGCCTAC 62.862 54.167 0.00 0.00 44.33 3.18
430 431 4.866858 CCGCTAGGATTAGGTTTCGCCTA 61.867 52.174 0.00 0.00 43.10 3.93
431 432 4.177120 CCGCTAGGATTAGGTTTCGCCT 62.177 54.545 0.00 0.00 45.64 5.52
432 433 1.499049 CGCTAGGATTAGGTTTCGCC 58.501 55.000 0.00 0.00 37.58 5.54
433 434 1.068127 TCCGCTAGGATTAGGTTTCGC 59.932 52.381 0.00 0.00 42.75 4.70
444 445 0.471191 TCATCCGTAGTCCGCTAGGA 59.529 55.000 0.00 0.00 46.11 2.94
445 446 1.315690 TTCATCCGTAGTCCGCTAGG 58.684 55.000 0.00 0.00 39.46 3.02
446 447 2.098607 TGTTTCATCCGTAGTCCGCTAG 59.901 50.000 0.00 0.00 34.38 3.42
447 448 2.093890 TGTTTCATCCGTAGTCCGCTA 58.906 47.619 0.00 0.00 34.38 4.26
448 449 0.892755 TGTTTCATCCGTAGTCCGCT 59.107 50.000 0.00 0.00 34.38 5.52
449 450 1.717194 TTGTTTCATCCGTAGTCCGC 58.283 50.000 0.00 0.00 34.38 5.54
450 451 2.091588 CGTTTGTTTCATCCGTAGTCCG 59.908 50.000 0.00 0.00 0.00 4.79
451 452 2.159747 GCGTTTGTTTCATCCGTAGTCC 60.160 50.000 0.00 0.00 0.00 3.85
452 453 2.471749 CGCGTTTGTTTCATCCGTAGTC 60.472 50.000 0.00 0.00 0.00 2.59
453 454 1.458064 CGCGTTTGTTTCATCCGTAGT 59.542 47.619 0.00 0.00 0.00 2.73
454 455 1.722464 TCGCGTTTGTTTCATCCGTAG 59.278 47.619 5.77 0.00 0.00 3.51
455 456 1.780806 TCGCGTTTGTTTCATCCGTA 58.219 45.000 5.77 0.00 0.00 4.02
456 457 0.938713 TTCGCGTTTGTTTCATCCGT 59.061 45.000 5.77 0.00 0.00 4.69
457 458 1.314581 GTTCGCGTTTGTTTCATCCG 58.685 50.000 5.77 0.00 0.00 4.18
458 459 1.002251 TGGTTCGCGTTTGTTTCATCC 60.002 47.619 5.77 0.00 0.00 3.51
459 460 2.041244 GTGGTTCGCGTTTGTTTCATC 58.959 47.619 5.77 0.00 0.00 2.92
460 461 1.402259 TGTGGTTCGCGTTTGTTTCAT 59.598 42.857 5.77 0.00 0.00 2.57
461 462 0.803117 TGTGGTTCGCGTTTGTTTCA 59.197 45.000 5.77 0.00 0.00 2.69
462 463 1.185189 GTGTGGTTCGCGTTTGTTTC 58.815 50.000 5.77 0.00 0.00 2.78
463 464 0.806241 AGTGTGGTTCGCGTTTGTTT 59.194 45.000 5.77 0.00 0.00 2.83
464 465 1.595794 CTAGTGTGGTTCGCGTTTGTT 59.404 47.619 5.77 0.00 0.00 2.83
465 466 1.214367 CTAGTGTGGTTCGCGTTTGT 58.786 50.000 5.77 0.00 0.00 2.83
466 467 0.110823 GCTAGTGTGGTTCGCGTTTG 60.111 55.000 5.77 0.00 0.00 2.93
467 468 1.554042 CGCTAGTGTGGTTCGCGTTT 61.554 55.000 5.77 0.00 39.07 3.60
468 469 2.019951 CGCTAGTGTGGTTCGCGTT 61.020 57.895 5.77 0.00 39.07 4.84
469 470 2.410638 TTCGCTAGTGTGGTTCGCGT 62.411 55.000 5.77 0.00 43.78 6.01
470 471 1.731613 TTCGCTAGTGTGGTTCGCG 60.732 57.895 0.00 0.00 44.63 5.87
471 472 1.623973 GGTTCGCTAGTGTGGTTCGC 61.624 60.000 2.66 0.00 0.00 4.70
472 473 0.038526 AGGTTCGCTAGTGTGGTTCG 60.039 55.000 2.66 0.00 0.00 3.95
473 474 3.521947 ATAGGTTCGCTAGTGTGGTTC 57.478 47.619 2.66 0.00 0.00 3.62
474 475 3.975168 AATAGGTTCGCTAGTGTGGTT 57.025 42.857 2.66 0.00 0.00 3.67
475 476 4.708421 TCTTAATAGGTTCGCTAGTGTGGT 59.292 41.667 2.66 0.00 0.00 4.16
476 477 5.258456 TCTTAATAGGTTCGCTAGTGTGG 57.742 43.478 2.66 0.00 0.00 4.17
477 478 7.591006 TTTTCTTAATAGGTTCGCTAGTGTG 57.409 36.000 2.66 0.00 0.00 3.82
500 501 9.838339 ATACATTTAGTCTGGATCGATCTTTTT 57.162 29.630 23.96 9.63 0.00 1.94
501 502 9.265901 CATACATTTAGTCTGGATCGATCTTTT 57.734 33.333 23.96 9.00 0.00 2.27
502 503 7.386299 GCATACATTTAGTCTGGATCGATCTTT 59.614 37.037 23.96 8.68 0.00 2.52
503 504 6.870965 GCATACATTTAGTCTGGATCGATCTT 59.129 38.462 23.96 8.37 0.00 2.40
504 505 6.015095 TGCATACATTTAGTCTGGATCGATCT 60.015 38.462 23.96 7.32 0.00 2.75
505 506 6.159293 TGCATACATTTAGTCTGGATCGATC 58.841 40.000 17.36 17.36 0.00 3.69
506 507 6.015095 TCTGCATACATTTAGTCTGGATCGAT 60.015 38.462 0.00 0.00 0.00 3.59
507 508 5.301805 TCTGCATACATTTAGTCTGGATCGA 59.698 40.000 0.00 0.00 0.00 3.59
508 509 5.532557 TCTGCATACATTTAGTCTGGATCG 58.467 41.667 0.00 0.00 0.00 3.69
509 510 7.385267 AGATCTGCATACATTTAGTCTGGATC 58.615 38.462 0.00 0.00 29.82 3.36
510 511 7.313740 AGATCTGCATACATTTAGTCTGGAT 57.686 36.000 0.00 0.00 0.00 3.41
511 512 6.737720 AGATCTGCATACATTTAGTCTGGA 57.262 37.500 0.00 0.00 0.00 3.86
512 513 8.893219 TTTAGATCTGCATACATTTAGTCTGG 57.107 34.615 5.18 0.00 0.00 3.86
537 538 9.955102 ACCTAATATTAAAGGACGAAGACTTTT 57.045 29.630 10.68 0.00 38.58 2.27
587 588 9.197306 ACAAGAAGGAAAAATACTAAACCAAGT 57.803 29.630 0.00 0.00 0.00 3.16
595 596 8.736244 GCCACAATACAAGAAGGAAAAATACTA 58.264 33.333 0.00 0.00 0.00 1.82
596 597 7.232534 TGCCACAATACAAGAAGGAAAAATACT 59.767 33.333 0.00 0.00 0.00 2.12
597 598 7.375053 TGCCACAATACAAGAAGGAAAAATAC 58.625 34.615 0.00 0.00 0.00 1.89
598 599 7.531857 TGCCACAATACAAGAAGGAAAAATA 57.468 32.000 0.00 0.00 0.00 1.40
599 600 6.418057 TGCCACAATACAAGAAGGAAAAAT 57.582 33.333 0.00 0.00 0.00 1.82
600 601 5.860941 TGCCACAATACAAGAAGGAAAAA 57.139 34.783 0.00 0.00 0.00 1.94
601 602 5.860941 TTGCCACAATACAAGAAGGAAAA 57.139 34.783 0.00 0.00 0.00 2.29
602 603 5.860941 TTTGCCACAATACAAGAAGGAAA 57.139 34.783 0.00 0.00 0.00 3.13
603 604 5.860941 TTTTGCCACAATACAAGAAGGAA 57.139 34.783 0.00 0.00 0.00 3.36
604 605 7.232534 ACTTATTTTGCCACAATACAAGAAGGA 59.767 33.333 0.00 0.00 0.00 3.36
605 606 7.378181 ACTTATTTTGCCACAATACAAGAAGG 58.622 34.615 0.00 0.00 0.00 3.46
606 607 9.906660 TTACTTATTTTGCCACAATACAAGAAG 57.093 29.630 0.00 0.00 0.00 2.85
615 616 9.810545 GCCTTATTATTACTTATTTTGCCACAA 57.189 29.630 0.00 0.00 0.00 3.33
616 617 8.972127 TGCCTTATTATTACTTATTTTGCCACA 58.028 29.630 0.00 0.00 0.00 4.17
617 618 9.463443 CTGCCTTATTATTACTTATTTTGCCAC 57.537 33.333 0.00 0.00 0.00 5.01
618 619 8.637986 CCTGCCTTATTATTACTTATTTTGCCA 58.362 33.333 0.00 0.00 0.00 4.92
619 620 8.638873 ACCTGCCTTATTATTACTTATTTTGCC 58.361 33.333 0.00 0.00 0.00 4.52
620 621 9.463443 CACCTGCCTTATTATTACTTATTTTGC 57.537 33.333 0.00 0.00 0.00 3.68
625 626 9.350951 GGAAACACCTGCCTTATTATTACTTAT 57.649 33.333 0.00 0.00 35.41 1.73
626 627 8.741603 GGAAACACCTGCCTTATTATTACTTA 57.258 34.615 0.00 0.00 35.41 2.24
627 628 7.640597 GGAAACACCTGCCTTATTATTACTT 57.359 36.000 0.00 0.00 35.41 2.24
643 644 5.961272 TCTTTTCTTGACAAAGGAAACACC 58.039 37.500 2.91 0.00 36.20 4.16
644 645 7.312899 TCTTCTTTTCTTGACAAAGGAAACAC 58.687 34.615 2.91 0.00 36.20 3.32
645 646 7.461182 TCTTCTTTTCTTGACAAAGGAAACA 57.539 32.000 2.91 0.00 36.20 2.83
646 647 7.009631 GCTTCTTCTTTTCTTGACAAAGGAAAC 59.990 37.037 2.91 0.00 36.20 2.78
647 648 7.035612 GCTTCTTCTTTTCTTGACAAAGGAAA 58.964 34.615 0.00 0.00 38.36 3.13
648 649 6.564328 GCTTCTTCTTTTCTTGACAAAGGAA 58.436 36.000 0.00 0.00 32.27 3.36
649 650 5.220854 CGCTTCTTCTTTTCTTGACAAAGGA 60.221 40.000 0.00 0.00 33.90 3.36
650 651 4.972440 CGCTTCTTCTTTTCTTGACAAAGG 59.028 41.667 0.00 0.00 33.90 3.11
651 652 5.810525 TCGCTTCTTCTTTTCTTGACAAAG 58.189 37.500 0.00 0.00 33.22 2.77
652 653 5.811399 TCGCTTCTTCTTTTCTTGACAAA 57.189 34.783 0.00 0.00 0.00 2.83
653 654 5.811399 TTCGCTTCTTCTTTTCTTGACAA 57.189 34.783 0.00 0.00 0.00 3.18
654 655 6.377327 AATTCGCTTCTTCTTTTCTTGACA 57.623 33.333 0.00 0.00 0.00 3.58
655 656 7.220875 ACAAAATTCGCTTCTTCTTTTCTTGAC 59.779 33.333 0.00 0.00 0.00 3.18
656 657 7.220683 CACAAAATTCGCTTCTTCTTTTCTTGA 59.779 33.333 0.00 0.00 0.00 3.02
657 658 7.332530 CACAAAATTCGCTTCTTCTTTTCTTG 58.667 34.615 0.00 0.00 0.00 3.02
658 659 6.019559 GCACAAAATTCGCTTCTTCTTTTCTT 60.020 34.615 0.00 0.00 0.00 2.52
659 660 5.460091 GCACAAAATTCGCTTCTTCTTTTCT 59.540 36.000 0.00 0.00 0.00 2.52
660 661 5.231991 TGCACAAAATTCGCTTCTTCTTTTC 59.768 36.000 0.00 0.00 0.00 2.29
661 662 5.108517 TGCACAAAATTCGCTTCTTCTTTT 58.891 33.333 0.00 0.00 0.00 2.27
662 663 4.681744 TGCACAAAATTCGCTTCTTCTTT 58.318 34.783 0.00 0.00 0.00 2.52
663 664 4.305989 TGCACAAAATTCGCTTCTTCTT 57.694 36.364 0.00 0.00 0.00 2.52
664 665 3.988379 TGCACAAAATTCGCTTCTTCT 57.012 38.095 0.00 0.00 0.00 2.85
665 666 5.388225 TTTTGCACAAAATTCGCTTCTTC 57.612 34.783 4.47 0.00 35.57 2.87
666 667 5.989551 ATTTTGCACAAAATTCGCTTCTT 57.010 30.435 14.11 0.00 45.67 2.52
667 668 6.215845 ACTATTTTGCACAAAATTCGCTTCT 58.784 32.000 22.40 3.75 45.67 2.85
668 669 6.363357 AGACTATTTTGCACAAAATTCGCTTC 59.637 34.615 22.40 13.24 45.67 3.86
669 670 6.215845 AGACTATTTTGCACAAAATTCGCTT 58.784 32.000 22.40 4.99 45.67 4.68
670 671 5.772521 AGACTATTTTGCACAAAATTCGCT 58.227 33.333 22.40 15.00 45.67 4.93
671 672 5.858581 AGAGACTATTTTGCACAAAATTCGC 59.141 36.000 22.40 16.85 45.67 4.70
672 673 6.524586 GGAGAGACTATTTTGCACAAAATTCG 59.475 38.462 22.40 16.76 45.67 3.34
673 674 6.524586 CGGAGAGACTATTTTGCACAAAATTC 59.475 38.462 22.40 15.97 45.67 2.17
674 675 6.016276 ACGGAGAGACTATTTTGCACAAAATT 60.016 34.615 22.40 9.14 45.67 1.82
676 677 4.819630 ACGGAGAGACTATTTTGCACAAAA 59.180 37.500 10.70 10.70 43.48 2.44
677 678 4.385825 ACGGAGAGACTATTTTGCACAAA 58.614 39.130 0.00 0.00 0.00 2.83
678 679 4.002906 ACGGAGAGACTATTTTGCACAA 57.997 40.909 0.00 0.00 0.00 3.33
679 680 3.678056 ACGGAGAGACTATTTTGCACA 57.322 42.857 0.00 0.00 0.00 4.57
680 681 4.691216 AGAAACGGAGAGACTATTTTGCAC 59.309 41.667 0.00 0.00 0.00 4.57
681 682 4.894784 AGAAACGGAGAGACTATTTTGCA 58.105 39.130 0.00 0.00 0.00 4.08
682 683 6.963049 TTAGAAACGGAGAGACTATTTTGC 57.037 37.500 0.00 0.00 0.00 3.68
721 722 8.353684 CCGTATGTAGTTCATAGTGAAATCTCT 58.646 37.037 0.00 0.00 38.22 3.10
722 723 8.350722 TCCGTATGTAGTTCATAGTGAAATCTC 58.649 37.037 0.00 0.00 38.22 2.75
723 724 8.234136 TCCGTATGTAGTTCATAGTGAAATCT 57.766 34.615 0.00 0.00 38.22 2.40
724 725 7.115095 GCTCCGTATGTAGTTCATAGTGAAATC 59.885 40.741 0.00 0.00 38.22 2.17
725 726 6.924060 GCTCCGTATGTAGTTCATAGTGAAAT 59.076 38.462 0.00 0.00 38.22 2.17
726 727 6.127563 TGCTCCGTATGTAGTTCATAGTGAAA 60.128 38.462 0.00 0.00 38.22 2.69
727 728 5.358725 TGCTCCGTATGTAGTTCATAGTGAA 59.641 40.000 0.00 0.00 39.36 3.18
728 729 4.885325 TGCTCCGTATGTAGTTCATAGTGA 59.115 41.667 0.00 0.00 39.36 3.41
729 730 5.183014 TGCTCCGTATGTAGTTCATAGTG 57.817 43.478 0.00 0.00 39.36 2.74
730 731 5.847111 TTGCTCCGTATGTAGTTCATAGT 57.153 39.130 0.00 0.00 39.36 2.12
731 732 7.715265 ATTTTGCTCCGTATGTAGTTCATAG 57.285 36.000 0.00 0.00 39.36 2.23
732 733 9.256477 CTTATTTTGCTCCGTATGTAGTTCATA 57.744 33.333 0.00 0.00 37.91 2.15
733 734 7.769044 ACTTATTTTGCTCCGTATGTAGTTCAT 59.231 33.333 0.00 0.00 40.25 2.57
734 735 7.064134 CACTTATTTTGCTCCGTATGTAGTTCA 59.936 37.037 0.00 0.00 0.00 3.18
735 736 7.277098 TCACTTATTTTGCTCCGTATGTAGTTC 59.723 37.037 0.00 0.00 0.00 3.01
736 737 7.101054 TCACTTATTTTGCTCCGTATGTAGTT 58.899 34.615 0.00 0.00 0.00 2.24
737 738 6.636705 TCACTTATTTTGCTCCGTATGTAGT 58.363 36.000 0.00 0.00 0.00 2.73
738 739 7.534085 TTCACTTATTTTGCTCCGTATGTAG 57.466 36.000 0.00 0.00 0.00 2.74
739 740 7.985184 AGATTCACTTATTTTGCTCCGTATGTA 59.015 33.333 0.00 0.00 0.00 2.29
740 741 6.823689 AGATTCACTTATTTTGCTCCGTATGT 59.176 34.615 0.00 0.00 0.00 2.29
741 742 7.251704 AGATTCACTTATTTTGCTCCGTATG 57.748 36.000 0.00 0.00 0.00 2.39
742 743 7.985184 TGTAGATTCACTTATTTTGCTCCGTAT 59.015 33.333 0.00 0.00 0.00 3.06
743 744 7.277098 GTGTAGATTCACTTATTTTGCTCCGTA 59.723 37.037 0.00 0.00 35.68 4.02
744 745 6.092259 GTGTAGATTCACTTATTTTGCTCCGT 59.908 38.462 0.00 0.00 35.68 4.69
745 746 6.313905 AGTGTAGATTCACTTATTTTGCTCCG 59.686 38.462 0.00 0.00 44.92 4.63
746 747 7.617041 AGTGTAGATTCACTTATTTTGCTCC 57.383 36.000 0.00 0.00 44.92 4.70
776 777 9.875691 AACTACATACGGACGTATATAGACATA 57.124 33.333 27.21 9.22 39.26 2.29
777 778 8.783833 AACTACATACGGACGTATATAGACAT 57.216 34.615 27.21 14.98 39.26 3.06
778 779 8.498358 CAAACTACATACGGACGTATATAGACA 58.502 37.037 27.21 1.35 39.26 3.41
779 780 8.499162 ACAAACTACATACGGACGTATATAGAC 58.501 37.037 27.21 0.00 39.26 2.59
780 781 8.607441 ACAAACTACATACGGACGTATATAGA 57.393 34.615 27.21 10.40 39.26 1.98
781 782 9.964253 CTACAAACTACATACGGACGTATATAG 57.036 37.037 21.79 21.79 41.37 1.31
782 783 9.489084 ACTACAAACTACATACGGACGTATATA 57.511 33.333 15.98 9.46 39.07 0.86
783 784 8.285394 CACTACAAACTACATACGGACGTATAT 58.715 37.037 15.98 8.79 39.07 0.86
784 785 7.254761 CCACTACAAACTACATACGGACGTATA 60.255 40.741 15.98 2.61 39.07 1.47
785 786 6.458751 CCACTACAAACTACATACGGACGTAT 60.459 42.308 11.25 11.25 41.49 3.06
786 787 5.163764 CCACTACAAACTACATACGGACGTA 60.164 44.000 7.05 7.05 34.87 3.57
787 788 4.379813 CCACTACAAACTACATACGGACGT 60.380 45.833 1.98 1.98 0.00 4.34
788 789 4.100529 CCACTACAAACTACATACGGACG 58.899 47.826 0.00 0.00 0.00 4.79
789 790 5.314923 TCCACTACAAACTACATACGGAC 57.685 43.478 0.00 0.00 0.00 4.79
790 791 5.981088 TTCCACTACAAACTACATACGGA 57.019 39.130 0.00 0.00 0.00 4.69
791 792 6.103997 ACATTCCACTACAAACTACATACGG 58.896 40.000 0.00 0.00 0.00 4.02
792 793 7.033791 AGACATTCCACTACAAACTACATACG 58.966 38.462 0.00 0.00 0.00 3.06
793 794 9.865321 TTAGACATTCCACTACAAACTACATAC 57.135 33.333 0.00 0.00 0.00 2.39
795 796 9.787435 TTTTAGACATTCCACTACAAACTACAT 57.213 29.630 0.00 0.00 0.00 2.29
796 797 9.616156 TTTTTAGACATTCCACTACAAACTACA 57.384 29.630 0.00 0.00 0.00 2.74
799 800 8.837389 GTCTTTTTAGACATTCCACTACAAACT 58.163 33.333 0.00 0.00 38.59 2.66
800 801 8.837389 AGTCTTTTTAGACATTCCACTACAAAC 58.163 33.333 7.92 0.00 41.02 2.93
801 802 8.974060 AGTCTTTTTAGACATTCCACTACAAA 57.026 30.769 7.92 0.00 41.02 2.83
802 803 8.974060 AAGTCTTTTTAGACATTCCACTACAA 57.026 30.769 7.92 0.00 41.02 2.41
819 820 9.907229 CTCCCTTGTCCTAAATATAAGTCTTTT 57.093 33.333 0.00 0.00 0.00 2.27
820 821 9.059023 ACTCCCTTGTCCTAAATATAAGTCTTT 57.941 33.333 0.00 0.00 0.00 2.52
821 822 8.625467 ACTCCCTTGTCCTAAATATAAGTCTT 57.375 34.615 0.00 0.00 0.00 3.01
822 823 9.369672 CTACTCCCTTGTCCTAAATATAAGTCT 57.630 37.037 0.00 0.00 0.00 3.24
823 824 9.364653 TCTACTCCCTTGTCCTAAATATAAGTC 57.635 37.037 0.00 0.00 0.00 3.01
824 825 9.725206 TTCTACTCCCTTGTCCTAAATATAAGT 57.275 33.333 0.00 0.00 0.00 2.24
828 829 8.832735 TGTTTTCTACTCCCTTGTCCTAAATAT 58.167 33.333 0.00 0.00 0.00 1.28
829 830 8.209802 TGTTTTCTACTCCCTTGTCCTAAATA 57.790 34.615 0.00 0.00 0.00 1.40
830 831 7.086685 TGTTTTCTACTCCCTTGTCCTAAAT 57.913 36.000 0.00 0.00 0.00 1.40
831 832 6.503560 TGTTTTCTACTCCCTTGTCCTAAA 57.496 37.500 0.00 0.00 0.00 1.85
832 833 6.503560 TTGTTTTCTACTCCCTTGTCCTAA 57.496 37.500 0.00 0.00 0.00 2.69
833 834 6.100714 AGTTTGTTTTCTACTCCCTTGTCCTA 59.899 38.462 0.00 0.00 0.00 2.94
834 835 5.104067 AGTTTGTTTTCTACTCCCTTGTCCT 60.104 40.000 0.00 0.00 0.00 3.85
835 836 5.131067 AGTTTGTTTTCTACTCCCTTGTCC 58.869 41.667 0.00 0.00 0.00 4.02
836 837 6.238676 GGAAGTTTGTTTTCTACTCCCTTGTC 60.239 42.308 0.00 0.00 0.00 3.18
837 838 5.593095 GGAAGTTTGTTTTCTACTCCCTTGT 59.407 40.000 0.00 0.00 0.00 3.16
838 839 5.828328 AGGAAGTTTGTTTTCTACTCCCTTG 59.172 40.000 0.00 0.00 0.00 3.61
839 840 6.014771 AGGAAGTTTGTTTTCTACTCCCTT 57.985 37.500 0.00 0.00 0.00 3.95
840 841 5.648330 AGGAAGTTTGTTTTCTACTCCCT 57.352 39.130 0.00 0.00 0.00 4.20
841 842 6.546403 AGAAAGGAAGTTTGTTTTCTACTCCC 59.454 38.462 7.86 0.00 37.92 4.30
842 843 7.569639 AGAAAGGAAGTTTGTTTTCTACTCC 57.430 36.000 7.86 0.00 37.92 3.85
843 844 9.504710 GAAAGAAAGGAAGTTTGTTTTCTACTC 57.495 33.333 9.30 7.01 40.69 2.59
844 845 8.182227 CGAAAGAAAGGAAGTTTGTTTTCTACT 58.818 33.333 9.30 0.00 40.69 2.57
845 846 7.966753 ACGAAAGAAAGGAAGTTTGTTTTCTAC 59.033 33.333 9.30 7.23 40.69 2.59
915 916 3.947196 CGACATTGGAGATTTTGGATCCA 59.053 43.478 11.44 11.44 41.33 3.41
916 917 3.947834 ACGACATTGGAGATTTTGGATCC 59.052 43.478 4.20 4.20 0.00 3.36
928 929 1.404986 GGTGGAATCGACGACATTGGA 60.405 52.381 0.00 0.00 0.00 3.53
956 957 3.190535 GGTGTTTGAGTGTGTTGTCTTGT 59.809 43.478 0.00 0.00 0.00 3.16
960 961 2.004017 TCGGTGTTTGAGTGTGTTGTC 58.996 47.619 0.00 0.00 0.00 3.18
1276 1299 3.093172 GGCCAGGGAGAAGGAGGG 61.093 72.222 0.00 0.00 0.00 4.30
1531 1606 1.066303 GTCAGCATCTTCGTCCTCGAT 59.934 52.381 0.00 0.00 45.65 3.59
1558 1651 0.731514 CGCACCGACGTGACATACTT 60.732 55.000 0.00 0.00 43.14 2.24
1574 1667 2.097661 CTCCGACGAGTATACGCGCA 62.098 60.000 25.91 9.11 42.87 6.09
1724 1835 0.595825 GCCATGCCTTGCTAAATCGC 60.596 55.000 0.00 0.00 0.00 4.58
1755 1866 1.885388 CTCGTGGTTTGGTGCGTCA 60.885 57.895 0.00 0.00 0.00 4.35
1799 1928 0.457851 GTCCTCGGACACCATGAGAG 59.542 60.000 11.12 0.00 44.02 3.20
1812 1941 3.760035 CCCAGTCCACCGTCCTCG 61.760 72.222 0.00 0.00 0.00 4.63
1944 2092 0.537188 CTGCATTCACCCGAGTACCT 59.463 55.000 0.00 0.00 0.00 3.08
1948 2096 1.072331 AGTTTCTGCATTCACCCGAGT 59.928 47.619 0.00 0.00 0.00 4.18
1973 2121 1.209127 GCAAACCCCAACACGATCG 59.791 57.895 14.88 14.88 0.00 3.69
2086 2240 4.963276 TTGGAATCAAATTACAGGAGCG 57.037 40.909 0.00 0.00 33.93 5.03
2207 2370 3.819368 TGTGCCTCATCTTCTGTTTTCA 58.181 40.909 0.00 0.00 0.00 2.69
2259 2422 0.868406 CGACAAAGCACCACTCCTTC 59.132 55.000 0.00 0.00 0.00 3.46
2334 2497 1.268352 TCAAAATAGGTGTGGCGTTGC 59.732 47.619 0.00 0.00 0.00 4.17
2365 2528 7.369607 TCAACAATGTCACCAATAGAAATGTG 58.630 34.615 0.00 0.00 0.00 3.21
2372 2535 9.912634 AAATACTTTCAACAATGTCACCAATAG 57.087 29.630 0.00 0.00 0.00 1.73
2397 2560 6.381420 TGGAAACCAACAAGTGATCCTAAAAA 59.619 34.615 0.00 0.00 0.00 1.94
2409 2593 2.958355 AGGACACATGGAAACCAACAAG 59.042 45.455 0.00 0.00 36.95 3.16
2518 2702 4.198584 CGAACGAAAGAAAGGTAAACACG 58.801 43.478 0.00 0.00 0.00 4.49
2541 2731 4.988716 ACAGTCGGGGCTCACGGA 62.989 66.667 0.00 0.00 0.00 4.69
2552 2742 3.816091 TCAAACACAAAACACACAGTCG 58.184 40.909 0.00 0.00 0.00 4.18
2595 2808 3.961408 AGATGCCAGGTAATAACTCTCGT 59.039 43.478 0.00 0.00 0.00 4.18
2629 2844 4.906065 AAATGCTCATCACAATACGCAT 57.094 36.364 0.00 0.00 39.53 4.73
2631 2846 6.429624 TGATTAAATGCTCATCACAATACGC 58.570 36.000 0.00 0.00 0.00 4.42
2632 2847 8.736742 GTTTGATTAAATGCTCATCACAATACG 58.263 33.333 0.00 0.00 0.00 3.06
2658 2875 3.938963 ACGTACCAGTCCAATAATTGCAG 59.061 43.478 0.00 0.00 0.00 4.41
2678 2897 9.751542 ATAACTCTTCTCAAATAGGATAACACG 57.248 33.333 0.00 0.00 0.00 4.49
2715 2982 5.412526 ACAAATAAACAACACGTCGATGT 57.587 34.783 3.92 3.92 0.00 3.06
2787 3067 6.598753 TTTCTGTTGAGTTCGGTTTCTAAG 57.401 37.500 0.00 0.00 0.00 2.18
2823 3108 4.024893 CCGTCATCCATTTTAATGACCTCG 60.025 45.833 9.26 3.19 45.79 4.63
2844 3129 3.963383 AGCGCAACTAAAATTATCCCG 57.037 42.857 11.47 0.00 0.00 5.14
2847 3132 8.669394 ACTTTTGTAGCGCAACTAAAATTATC 57.331 30.769 11.47 0.00 36.72 1.75
2939 3225 2.305927 TCTCCTTGACATGGAACCCTTC 59.694 50.000 11.00 0.00 32.61 3.46
2940 3226 2.348472 TCTCCTTGACATGGAACCCTT 58.652 47.619 11.00 0.00 32.61 3.95
2970 3256 0.612174 TGAGTGCGCTAGAACCCTCT 60.612 55.000 9.73 0.00 35.52 3.69
3026 3312 0.400213 ACTCTTGGGAACATCGCCAA 59.600 50.000 0.00 0.00 42.32 4.52
3080 3393 5.012893 TCGAGCTACCATCATCATCTATGT 58.987 41.667 0.00 0.00 36.89 2.29
3096 3409 3.256631 TGCTGCATAAGATCATCGAGCTA 59.743 43.478 0.00 0.00 0.00 3.32
3113 3426 2.180017 CGCCCTCAACATTGCTGC 59.820 61.111 0.00 0.00 0.00 5.25
3187 3500 3.554752 CCGGCATGAACAATGGTCTTTTT 60.555 43.478 0.00 0.00 36.71 1.94
3188 3501 2.029110 CCGGCATGAACAATGGTCTTTT 60.029 45.455 0.00 0.00 36.71 2.27
3189 3502 1.545582 CCGGCATGAACAATGGTCTTT 59.454 47.619 0.00 0.00 36.71 2.52
3190 3503 1.176527 CCGGCATGAACAATGGTCTT 58.823 50.000 0.00 0.00 36.71 3.01
3201 3514 1.920734 ATGTTGTAGCCCCGGCATGA 61.921 55.000 8.74 0.00 44.88 3.07
3202 3515 1.037030 AATGTTGTAGCCCCGGCATG 61.037 55.000 8.74 0.00 44.88 4.06
3203 3516 0.548989 TAATGTTGTAGCCCCGGCAT 59.451 50.000 8.74 0.00 44.88 4.40
3217 3530 9.357652 GAAATAATGCAGTTCACAACATAATGT 57.642 29.630 0.00 0.00 31.48 2.71
3226 3539 4.761227 TCAGCAGAAATAATGCAGTTCACA 59.239 37.500 0.00 0.00 46.31 3.58
3232 3545 4.978083 AACCTCAGCAGAAATAATGCAG 57.022 40.909 0.00 0.00 46.31 4.41
3281 3598 2.114616 AGGCTCATGACACCTTCTAGG 58.885 52.381 6.70 0.00 42.49 3.02
3290 3607 1.291184 CGCAACGAAGGCTCATGACA 61.291 55.000 0.00 0.00 0.00 3.58
3295 3612 4.314440 AGGCGCAACGAAGGCTCA 62.314 61.111 10.83 0.00 39.09 4.26
3303 3620 0.297230 CAAAACAAACAGGCGCAACG 59.703 50.000 10.83 0.00 0.00 4.10
3342 3659 9.382307 ACCAAAAAGGAAAAGTATAAACCCATA 57.618 29.630 0.00 0.00 41.22 2.74
3380 3698 2.292267 ACCACATTCAATCAGATCGGC 58.708 47.619 0.00 0.00 0.00 5.54
3382 3700 7.250445 TCAATAACCACATTCAATCAGATCG 57.750 36.000 0.00 0.00 0.00 3.69
3397 3715 6.805016 ATAACAAATGCCCATCAATAACCA 57.195 33.333 0.00 0.00 0.00 3.67
3412 3730 4.522789 AGGCACAAGGAACGAATAACAAAT 59.477 37.500 0.00 0.00 0.00 2.32
3446 3764 7.938140 AGTAGAGATACATATCTTCAGCTCC 57.062 40.000 2.96 0.00 42.79 4.70
3455 3773 8.410673 TGTCTCCCAAAGTAGAGATACATATC 57.589 38.462 0.00 0.00 41.03 1.63
3468 3786 4.451900 CCGCTTAATATGTCTCCCAAAGT 58.548 43.478 0.00 0.00 0.00 2.66
3469 3787 3.815401 CCCGCTTAATATGTCTCCCAAAG 59.185 47.826 0.00 0.00 0.00 2.77
3472 3790 1.071699 GCCCGCTTAATATGTCTCCCA 59.928 52.381 0.00 0.00 0.00 4.37
3508 3826 5.241403 TGTGATGGTTCTTAGTTGACCAT 57.759 39.130 13.99 13.99 43.15 3.55
3509 3827 4.698201 TGTGATGGTTCTTAGTTGACCA 57.302 40.909 7.16 7.16 34.72 4.02
3512 3830 6.710278 TCATGATGTGATGGTTCTTAGTTGA 58.290 36.000 0.00 0.00 0.00 3.18
3534 4927 2.032620 GTTCTCGGGGATTAGAGCTCA 58.967 52.381 17.77 0.00 34.66 4.26
3535 4928 1.341852 GGTTCTCGGGGATTAGAGCTC 59.658 57.143 5.27 5.27 34.66 4.09
3601 4994 4.987419 CGTTGTTCACGTTGTGGG 57.013 55.556 0.00 0.00 44.49 4.61
3609 5002 0.653636 TCCAAGCGTTCGTTGTTCAC 59.346 50.000 0.00 0.00 0.00 3.18
3616 5009 2.665185 GGCAGTCCAAGCGTTCGT 60.665 61.111 0.00 0.00 0.00 3.85
3643 5036 6.013812 TGGATTTGGCTGCCTAGTTTTAATTT 60.014 34.615 21.03 0.00 0.00 1.82
3644 5037 5.483583 TGGATTTGGCTGCCTAGTTTTAATT 59.516 36.000 21.03 0.10 0.00 1.40
3645 5038 5.022787 TGGATTTGGCTGCCTAGTTTTAAT 58.977 37.500 21.03 1.10 0.00 1.40
3646 5039 4.411927 TGGATTTGGCTGCCTAGTTTTAA 58.588 39.130 21.03 0.20 0.00 1.52
3647 5040 4.016444 CTGGATTTGGCTGCCTAGTTTTA 58.984 43.478 21.03 0.00 0.00 1.52
3693 5086 4.825085 AGCCCGTTCTTAAATGTTTTCTCA 59.175 37.500 0.00 0.00 0.00 3.27
3702 5095 2.218603 CGCCATAGCCCGTTCTTAAAT 58.781 47.619 0.00 0.00 34.57 1.40
3741 5134 1.602323 TGGTTGTCCATGGGTTCGC 60.602 57.895 13.02 0.00 39.03 4.70
3833 5227 5.118664 TGACGACTTTCTCTTTGCTTATTCG 59.881 40.000 0.00 0.00 0.00 3.34
3842 5236 2.546778 TGCGTTGACGACTTTCTCTTT 58.453 42.857 7.85 0.00 43.02 2.52
3843 5237 2.218953 TGCGTTGACGACTTTCTCTT 57.781 45.000 7.85 0.00 43.02 2.85
3897 5293 4.006319 GCTCTATGGGGCTTATGAATGAC 58.994 47.826 0.00 0.00 0.00 3.06
4104 5509 6.544931 CCCTACAGAATGATTGTGTGATTGAT 59.455 38.462 17.04 0.00 39.69 2.57
4105 5510 5.882000 CCCTACAGAATGATTGTGTGATTGA 59.118 40.000 17.04 0.00 39.69 2.57
4106 5511 5.066893 CCCCTACAGAATGATTGTGTGATTG 59.933 44.000 17.04 5.67 39.69 2.67
4322 5728 5.106475 CCAATGGCAAGACAAATGAAAATGG 60.106 40.000 0.00 0.00 0.00 3.16
4527 5945 8.506168 TCACTTCTTGGTCCATGTATTATTTC 57.494 34.615 4.76 0.00 0.00 2.17
4678 6096 0.397187 TTAAAGCACTACACCCGGCA 59.603 50.000 0.00 0.00 0.00 5.69
4751 6170 4.707105 TGCTCTTGACTTCAATCAGACAA 58.293 39.130 0.00 0.00 35.02 3.18
4883 6309 3.676540 CATTACAATAACGGCCGTCAAC 58.323 45.455 34.29 0.00 0.00 3.18
5022 6452 3.340034 ACCAATCGAAAAAGCCGACATA 58.660 40.909 0.00 0.00 38.97 2.29
5146 6587 3.542604 ACCCAATCCTAGGAGTTCCTTT 58.457 45.455 18.34 2.16 46.09 3.11
5341 6787 1.315690 GAGTAAAAATAGGGGCGGCC 58.684 55.000 22.00 22.00 0.00 6.13
5435 6885 2.440796 TCGCCGACGGTAGGGATT 60.441 61.111 16.73 0.00 40.63 3.01
6144 7623 0.333312 ATCACCGCCCATTGGGTTTA 59.667 50.000 22.82 5.36 46.51 2.01
6167 7661 0.467474 TCGCCATGGTAGAGGTCGAT 60.467 55.000 14.67 0.00 0.00 3.59
6320 8763 6.896883 ACCTAGCCGAACTCCTTAATTTAAT 58.103 36.000 0.00 0.00 0.00 1.40
6369 8863 4.961438 TTGTAAGGGAAACTCTAACCGT 57.039 40.909 0.00 0.00 0.00 4.83
6520 9032 3.334691 TGACAAAAGGCCGATAGTTGAG 58.665 45.455 12.01 0.00 0.00 3.02
6596 9109 8.898761 TCTGAAAATGTAAAGCTTGAGTGTTTA 58.101 29.630 0.00 0.00 0.00 2.01
6660 9175 4.228824 ACCAGTAGAGGTTGTTAACAGGA 58.771 43.478 8.56 0.00 39.34 3.86
7291 11714 7.725251 TGAAGAACCTAAAATTGAACAGCATT 58.275 30.769 0.00 0.00 0.00 3.56
7704 12485 2.533266 AGATGTATTACAGCTGGCCG 57.467 50.000 19.93 0.00 44.04 6.13
7919 12706 2.831526 GAGCCCCTCCAGCAAATAAAAA 59.168 45.455 0.00 0.00 0.00 1.94
7966 12753 6.939163 AGAGGCAATTGCTTAAGAATCGATAT 59.061 34.615 28.42 0.00 41.70 1.63
8064 12851 1.997606 GTTGGATGGAACTAACGGACG 59.002 52.381 0.00 0.00 0.00 4.79
8300 13433 5.157067 GTGTAAGTTCTGTACCGTTAGTCC 58.843 45.833 0.00 0.00 0.00 3.85
8339 13472 7.231467 ACTTCAGGAACTTCAAGGCTTTATAA 58.769 34.615 0.00 0.00 34.60 0.98
8448 13606 5.886960 AGATCCACAATTTGTTACTCAGC 57.113 39.130 0.00 0.00 0.00 4.26
8555 13716 4.396166 CACCGAGCAACAAATTAGGAGAAT 59.604 41.667 0.00 0.00 0.00 2.40
8616 13778 5.048083 GGAATACACAATCAAGTTGCCTTCA 60.048 40.000 0.00 0.00 41.69 3.02
8680 13953 4.874396 TCAGTGAGCATTGCTTATGAGAAG 59.126 41.667 13.35 0.00 39.88 2.85
8742 14049 4.134563 TGAAGAACAAGCAAAGGAGGTAC 58.865 43.478 0.00 0.00 0.00 3.34
9008 14318 3.367600 GCATGCAACATCAGGTTCAATGA 60.368 43.478 14.21 0.00 37.72 2.57
9026 14336 4.612939 CGAAACAGATCATATGGCAGCATG 60.613 45.833 2.13 5.70 40.87 4.06
9027 14337 3.501062 CGAAACAGATCATATGGCAGCAT 59.499 43.478 2.13 0.00 0.00 3.79
9043 14357 1.339610 CATGCAAAACCCTCCGAAACA 59.660 47.619 0.00 0.00 0.00 2.83
9130 14451 2.540515 CAGGCAAGATTCGATACACGT 58.459 47.619 0.00 0.00 43.13 4.49
9319 14640 1.601419 GCTGATGCAACATGTGGGCT 61.601 55.000 19.74 8.65 39.41 5.19
9399 14735 9.389755 TGCATATGCTATCTAGTTACAACAAAA 57.610 29.630 27.13 0.00 42.66 2.44
9400 14736 8.956533 TGCATATGCTATCTAGTTACAACAAA 57.043 30.769 27.13 0.00 42.66 2.83
9401 14737 9.559732 AATGCATATGCTATCTAGTTACAACAA 57.440 29.630 27.13 2.17 42.66 2.83
9405 14741 9.860898 CTGTAATGCATATGCTATCTAGTTACA 57.139 33.333 27.13 22.70 42.66 2.41
9413 14749 9.694520 CGAATTAACTGTAATGCATATGCTATC 57.305 33.333 27.13 15.20 42.66 2.08
9608 14989 3.375299 CCGTGAATCATTTTGAGGACCTC 59.625 47.826 15.13 15.13 0.00 3.85
9619 15000 3.200825 AGGGATTGAGACCGTGAATCATT 59.799 43.478 0.00 0.00 0.00 2.57
9754 15135 2.358615 GTGTGCAGGGCGATGTCA 60.359 61.111 0.00 0.00 0.00 3.58


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.