Multiple sequence alignment - TraesCS4A01G366200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G366200 chr4A 100.000 5465 0 0 1 5465 639210134 639204670 0.000000e+00 10093
1 TraesCS4A01G366200 chr4A 81.862 419 56 17 1032 1433 545117384 545116969 8.770000e-88 335
2 TraesCS4A01G366200 chr4A 76.550 516 87 25 3384 3880 545115103 545114603 9.090000e-63 252
3 TraesCS4A01G366200 chr4A 86.275 102 5 5 2823 2918 545115379 545115281 9.680000e-18 102
4 TraesCS4A01G366200 chr5D 91.045 3082 187 42 874 3912 532552688 532555723 0.000000e+00 4080
5 TraesCS4A01G366200 chr5D 93.953 678 33 8 4795 5465 532556212 532556888 0.000000e+00 1018
6 TraesCS4A01G366200 chr5D 89.338 544 53 5 4083 4623 532555722 532556263 0.000000e+00 678
7 TraesCS4A01G366200 chr5B 88.067 1961 163 41 1994 3917 672618047 672619973 0.000000e+00 2259
8 TraesCS4A01G366200 chr5B 85.849 1166 71 33 874 2011 672616859 672617958 0.000000e+00 1153
9 TraesCS4A01G366200 chr5B 93.766 401 20 3 4824 5219 672620506 672620906 1.010000e-166 597
10 TraesCS4A01G366200 chr6B 95.921 809 33 0 1 809 678302661 678303469 0.000000e+00 1312
11 TraesCS4A01G366200 chr6B 90.566 159 15 0 4623 4781 626486448 626486606 1.540000e-50 211
12 TraesCS4A01G366200 chr6B 86.631 187 18 2 3912 4098 431936460 431936281 3.340000e-47 200
13 TraesCS4A01G366200 chr6B 75.479 261 57 7 305 562 334455527 334455271 2.670000e-23 121
14 TraesCS4A01G366200 chr7A 96.676 692 22 1 118 809 730755834 730756524 0.000000e+00 1149
15 TraesCS4A01G366200 chr7A 96.795 156 5 0 4626 4781 576131737 576131892 1.510000e-65 261
16 TraesCS4A01G366200 chr7A 91.160 181 7 5 3907 4084 156115830 156116004 2.540000e-58 237
17 TraesCS4A01G366200 chr7A 95.122 123 6 0 1 123 730753981 730754103 1.550000e-45 195
18 TraesCS4A01G366200 chr1D 81.775 631 115 0 4 634 309561400 309560770 3.750000e-146 529
19 TraesCS4A01G366200 chr1D 91.444 187 9 4 3902 4087 293904588 293904768 3.270000e-62 250
20 TraesCS4A01G366200 chr1D 76.233 223 47 4 405 625 451107786 451108004 4.470000e-21 113
21 TraesCS4A01G366200 chr1B 80.666 631 122 0 4 634 603516878 603516248 1.770000e-134 490
22 TraesCS4A01G366200 chr1B 76.652 227 47 5 334 557 624051846 624051623 2.670000e-23 121
23 TraesCS4A01G366200 chr3B 97.630 211 5 0 1 211 8572418 8572628 4.020000e-96 363
24 TraesCS4A01G366200 chr4D 81.132 424 59 15 1029 1435 51554021 51554440 2.460000e-83 320
25 TraesCS4A01G366200 chr4D 92.571 175 7 1 3914 4088 243613436 243613268 4.230000e-61 246
26 TraesCS4A01G366200 chr4D 75.969 516 91 25 3381 3877 51556006 51556507 9.150000e-58 235
27 TraesCS4A01G366200 chr4D 89.691 97 6 3 2823 2918 51555738 51555831 2.670000e-23 121
28 TraesCS4A01G366200 chr5A 96.815 157 4 1 4626 4781 364361224 364361380 1.510000e-65 261
29 TraesCS4A01G366200 chr5A 96.154 156 6 0 4626 4781 640098867 640098712 7.020000e-64 255
30 TraesCS4A01G366200 chr5A 92.000 175 8 1 3914 4088 505768810 505768642 1.970000e-59 241
31 TraesCS4A01G366200 chr5A 88.957 163 17 1 4622 4783 477787030 477787192 3.340000e-47 200
32 TraesCS4A01G366200 chr2B 92.982 171 11 1 3914 4084 670841015 670841184 1.180000e-61 248
33 TraesCS4A01G366200 chr2B 87.500 200 18 5 3899 4098 594833861 594834053 1.980000e-54 224
34 TraesCS4A01G366200 chr2B 87.634 186 17 1 3914 4099 786251198 786251019 1.540000e-50 211
35 TraesCS4A01G366200 chr3A 94.872 156 7 1 4626 4781 35417848 35417694 5.470000e-60 243
36 TraesCS4A01G366200 chr2D 94.304 158 9 0 4624 4781 498578423 498578266 5.470000e-60 243
37 TraesCS4A01G366200 chr2D 78.661 239 45 6 322 557 75737463 75737698 2.640000e-33 154
38 TraesCS4A01G366200 chr2D 77.130 223 45 4 405 625 14810989 14811207 2.070000e-24 124
39 TraesCS4A01G366200 chr7B 92.398 171 7 1 3914 4084 281384505 281384669 7.070000e-59 239
40 TraesCS4A01G366200 chr6D 91.954 174 8 1 3914 4087 218407210 218407377 7.070000e-59 239
41 TraesCS4A01G366200 chr4B 85.124 242 25 8 1201 1432 75738090 75738330 2.540000e-58 237
42 TraesCS4A01G366200 chr4B 88.660 97 7 3 2823 2918 75739586 75739679 1.240000e-21 115
43 TraesCS4A01G366200 chr1A 89.840 187 11 3 3902 4087 366266110 366266289 3.290000e-57 233
44 TraesCS4A01G366200 chr1A 92.308 156 12 0 4626 4781 544492236 544492081 7.130000e-54 222
45 TraesCS4A01G366200 chr7D 88.770 187 14 2 3912 4098 246603802 246603623 7.130000e-54 222
46 TraesCS4A01G366200 chr7D 88.043 184 15 5 3902 4085 568028586 568028762 1.540000e-50 211
47 TraesCS4A01G366200 chr7D 87.568 185 16 7 3914 4098 448031784 448031607 2.000000e-49 207
48 TraesCS4A01G366200 chr2A 93.333 150 9 1 4633 4782 692233939 692234087 2.560000e-53 220
49 TraesCS4A01G366200 chr3D 87.368 190 16 3 3912 4100 409891842 409892024 1.540000e-50 211
50 TraesCS4A01G366200 chr3D 87.701 187 16 2 3912 4098 474300067 474299888 1.540000e-50 211
51 TraesCS4A01G366200 chr3D 86.842 190 17 3 3909 4098 386293344 386293525 7.180000e-49 206


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G366200 chr4A 639204670 639210134 5464 True 10093.000000 10093 100.000000 1 5465 1 chr4A.!!$R1 5464
1 TraesCS4A01G366200 chr4A 545114603 545117384 2781 True 229.666667 335 81.562333 1032 3880 3 chr4A.!!$R2 2848
2 TraesCS4A01G366200 chr5D 532552688 532556888 4200 False 1925.333333 4080 91.445333 874 5465 3 chr5D.!!$F1 4591
3 TraesCS4A01G366200 chr5B 672616859 672620906 4047 False 1336.333333 2259 89.227333 874 5219 3 chr5B.!!$F1 4345
4 TraesCS4A01G366200 chr6B 678302661 678303469 808 False 1312.000000 1312 95.921000 1 809 1 chr6B.!!$F2 808
5 TraesCS4A01G366200 chr7A 730753981 730756524 2543 False 672.000000 1149 95.899000 1 809 2 chr7A.!!$F3 808
6 TraesCS4A01G366200 chr1D 309560770 309561400 630 True 529.000000 529 81.775000 4 634 1 chr1D.!!$R1 630
7 TraesCS4A01G366200 chr1B 603516248 603516878 630 True 490.000000 490 80.666000 4 634 1 chr1B.!!$R1 630
8 TraesCS4A01G366200 chr4D 51554021 51556507 2486 False 225.333333 320 82.264000 1029 3877 3 chr4D.!!$F1 2848

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
827 2564 0.032952 TGGACCCTTCGTCTCGTTTG 59.967 55.0 0.00 0.00 41.64 2.93 F
828 2565 0.033090 GGACCCTTCGTCTCGTTTGT 59.967 55.0 0.00 0.00 41.64 2.83 F
1448 3222 0.326927 TAACCAGGGGCTGCAGTTAC 59.673 55.0 16.64 6.12 0.00 2.50 F
2717 4980 0.107508 CACAGTCCCCTTCATCGCAT 60.108 55.0 0.00 0.00 0.00 4.73 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2081 4279 0.482446 TGACCCCAACCTGCTCATTT 59.518 50.0 0.0 0.0 0.00 2.32 R
2425 4654 1.094785 AGACAACAGCGTGCAACTTT 58.905 45.0 0.0 0.0 31.75 2.66 R
3134 5406 0.843309 TCACAGGAAAAGTGGCAGGA 59.157 50.0 0.0 0.0 37.58 3.86 R
4684 6993 0.034863 GAAATGGGCCGTGGAGGTAA 60.035 55.0 0.0 0.0 43.70 2.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
130 1867 2.647299 AGTCCCCAATACACAACCATGA 59.353 45.455 0.00 0.00 0.00 3.07
402 2139 2.335316 ACCTTCCACACGCTGTTTTA 57.665 45.000 0.00 0.00 0.00 1.52
479 2216 1.660355 GAGCTCACGGACTGTCACA 59.340 57.895 9.40 0.00 0.00 3.58
698 2435 1.575419 TACTTTCCCTGCCACGGTAT 58.425 50.000 0.00 0.00 0.00 2.73
776 2513 1.703411 CAACCTTTTCCTTGCTCCCA 58.297 50.000 0.00 0.00 0.00 4.37
809 2546 2.002586 CACCGCTTAACCTGACATCTG 58.997 52.381 0.00 0.00 0.00 2.90
810 2547 1.066143 ACCGCTTAACCTGACATCTGG 60.066 52.381 3.41 3.41 40.37 3.86
811 2548 1.207089 CCGCTTAACCTGACATCTGGA 59.793 52.381 11.42 0.00 38.22 3.86
812 2549 2.271800 CGCTTAACCTGACATCTGGAC 58.728 52.381 11.42 0.00 38.22 4.02
813 2550 2.633488 GCTTAACCTGACATCTGGACC 58.367 52.381 11.42 0.00 38.22 4.46
814 2551 2.681097 GCTTAACCTGACATCTGGACCC 60.681 54.545 11.42 0.00 38.22 4.46
815 2552 2.642171 TAACCTGACATCTGGACCCT 57.358 50.000 11.42 0.00 38.22 4.34
816 2553 1.747444 AACCTGACATCTGGACCCTT 58.253 50.000 11.42 0.00 38.22 3.95
817 2554 1.280457 ACCTGACATCTGGACCCTTC 58.720 55.000 11.42 0.00 38.22 3.46
818 2555 0.176680 CCTGACATCTGGACCCTTCG 59.823 60.000 0.00 0.00 37.15 3.79
819 2556 0.898320 CTGACATCTGGACCCTTCGT 59.102 55.000 0.00 0.00 0.00 3.85
820 2557 0.895530 TGACATCTGGACCCTTCGTC 59.104 55.000 0.00 0.00 41.15 4.20
821 2558 1.187087 GACATCTGGACCCTTCGTCT 58.813 55.000 0.00 0.00 41.64 4.18
822 2559 1.135333 GACATCTGGACCCTTCGTCTC 59.865 57.143 0.00 0.00 41.64 3.36
823 2560 0.101399 CATCTGGACCCTTCGTCTCG 59.899 60.000 0.00 0.00 41.64 4.04
824 2561 0.323542 ATCTGGACCCTTCGTCTCGT 60.324 55.000 0.00 0.00 41.64 4.18
825 2562 0.538977 TCTGGACCCTTCGTCTCGTT 60.539 55.000 0.00 0.00 41.64 3.85
826 2563 0.317479 CTGGACCCTTCGTCTCGTTT 59.683 55.000 0.00 0.00 41.64 3.60
827 2564 0.032952 TGGACCCTTCGTCTCGTTTG 59.967 55.000 0.00 0.00 41.64 2.93
828 2565 0.033090 GGACCCTTCGTCTCGTTTGT 59.967 55.000 0.00 0.00 41.64 2.83
829 2566 1.416373 GACCCTTCGTCTCGTTTGTC 58.584 55.000 0.00 0.00 38.57 3.18
830 2567 0.748450 ACCCTTCGTCTCGTTTGTCA 59.252 50.000 0.00 0.00 0.00 3.58
831 2568 1.137513 CCCTTCGTCTCGTTTGTCAC 58.862 55.000 0.00 0.00 0.00 3.67
839 2576 4.364817 CGTTTGTCACGGCCCTTA 57.635 55.556 0.00 0.00 45.89 2.69
840 2577 2.619362 CGTTTGTCACGGCCCTTAA 58.381 52.632 0.00 0.00 45.89 1.85
841 2578 1.161843 CGTTTGTCACGGCCCTTAAT 58.838 50.000 0.00 0.00 45.89 1.40
842 2579 1.538075 CGTTTGTCACGGCCCTTAATT 59.462 47.619 0.00 0.00 45.89 1.40
843 2580 2.743126 CGTTTGTCACGGCCCTTAATTA 59.257 45.455 0.00 0.00 45.89 1.40
844 2581 3.181514 CGTTTGTCACGGCCCTTAATTAG 60.182 47.826 0.00 0.00 45.89 1.73
845 2582 3.706600 TTGTCACGGCCCTTAATTAGT 57.293 42.857 0.00 0.00 0.00 2.24
846 2583 2.980568 TGTCACGGCCCTTAATTAGTG 58.019 47.619 0.00 0.00 0.00 2.74
847 2584 2.285977 GTCACGGCCCTTAATTAGTGG 58.714 52.381 0.00 0.58 0.00 4.00
848 2585 1.910671 TCACGGCCCTTAATTAGTGGT 59.089 47.619 0.00 0.00 0.00 4.16
849 2586 2.306512 TCACGGCCCTTAATTAGTGGTT 59.693 45.455 0.00 0.00 0.00 3.67
850 2587 3.086282 CACGGCCCTTAATTAGTGGTTT 58.914 45.455 0.00 0.00 0.00 3.27
851 2588 3.128068 CACGGCCCTTAATTAGTGGTTTC 59.872 47.826 0.00 0.00 0.00 2.78
852 2589 2.353579 CGGCCCTTAATTAGTGGTTTCG 59.646 50.000 0.00 3.76 0.00 3.46
853 2590 3.349927 GGCCCTTAATTAGTGGTTTCGT 58.650 45.455 0.00 0.00 0.00 3.85
854 2591 3.376234 GGCCCTTAATTAGTGGTTTCGTC 59.624 47.826 0.00 0.00 0.00 4.20
855 2592 3.063045 GCCCTTAATTAGTGGTTTCGTCG 59.937 47.826 4.76 0.00 0.00 5.12
856 2593 4.248058 CCCTTAATTAGTGGTTTCGTCGT 58.752 43.478 0.00 0.00 0.00 4.34
857 2594 4.692155 CCCTTAATTAGTGGTTTCGTCGTT 59.308 41.667 0.00 0.00 0.00 3.85
858 2595 5.179929 CCCTTAATTAGTGGTTTCGTCGTTT 59.820 40.000 0.00 0.00 0.00 3.60
859 2596 6.293571 CCCTTAATTAGTGGTTTCGTCGTTTT 60.294 38.462 0.00 0.00 0.00 2.43
860 2597 6.575942 CCTTAATTAGTGGTTTCGTCGTTTTG 59.424 38.462 0.00 0.00 0.00 2.44
861 2598 5.738118 AATTAGTGGTTTCGTCGTTTTGA 57.262 34.783 0.00 0.00 0.00 2.69
862 2599 4.782252 TTAGTGGTTTCGTCGTTTTGAG 57.218 40.909 0.00 0.00 0.00 3.02
863 2600 2.896168 AGTGGTTTCGTCGTTTTGAGA 58.104 42.857 0.00 0.00 0.00 3.27
864 2601 3.463944 AGTGGTTTCGTCGTTTTGAGAT 58.536 40.909 0.00 0.00 0.00 2.75
865 2602 3.247648 AGTGGTTTCGTCGTTTTGAGATG 59.752 43.478 0.00 0.00 0.00 2.90
866 2603 3.001939 GTGGTTTCGTCGTTTTGAGATGT 59.998 43.478 0.00 0.00 0.00 3.06
867 2604 4.209703 GTGGTTTCGTCGTTTTGAGATGTA 59.790 41.667 0.00 0.00 0.00 2.29
868 2605 4.992319 TGGTTTCGTCGTTTTGAGATGTAT 59.008 37.500 0.00 0.00 0.00 2.29
869 2606 5.107259 TGGTTTCGTCGTTTTGAGATGTATG 60.107 40.000 0.00 0.00 0.00 2.39
870 2607 5.107220 GGTTTCGTCGTTTTGAGATGTATGT 60.107 40.000 0.00 0.00 0.00 2.29
871 2608 6.089820 GGTTTCGTCGTTTTGAGATGTATGTA 59.910 38.462 0.00 0.00 0.00 2.29
872 2609 6.864560 TTCGTCGTTTTGAGATGTATGTAG 57.135 37.500 0.00 0.00 0.00 2.74
1448 3222 0.326927 TAACCAGGGGCTGCAGTTAC 59.673 55.000 16.64 6.12 0.00 2.50
1449 3223 2.044946 CCAGGGGCTGCAGTTACC 60.045 66.667 16.64 14.89 0.00 2.85
1560 3339 1.306226 AGGGCAGTAGGTCAGGGAC 60.306 63.158 0.00 0.00 0.00 4.46
1664 3443 7.214381 CAGAATTTGGTGGCAATTGATATCAT 58.786 34.615 10.34 0.00 0.00 2.45
1791 3570 4.530875 AGGCAATGACTTAGGAATTCCAG 58.469 43.478 26.22 17.49 38.89 3.86
2010 4166 9.605275 CTGGATGTATTCTCTTTCTGAAATACA 57.395 33.333 13.04 13.04 0.00 2.29
2051 4244 5.176592 GGATAGTCTTGTTTGGTGTAGTCC 58.823 45.833 0.00 0.00 0.00 3.85
2073 4266 4.562552 CCTGAGTGAGTTTCTCCTCTTTCC 60.563 50.000 12.60 0.00 32.76 3.13
2074 4267 3.967326 TGAGTGAGTTTCTCCTCTTTCCA 59.033 43.478 12.60 0.00 32.76 3.53
2081 4279 6.183361 TGAGTTTCTCCTCTTTCCATCTGAAA 60.183 38.462 0.00 0.00 40.64 2.69
2137 4336 6.148315 TGTTTCTTGTCAATGTAGAGAGCATG 59.852 38.462 0.00 0.00 0.00 4.06
2215 4425 9.768662 GACATAATTGCTTCCATATCCATTTTT 57.231 29.630 0.00 0.00 0.00 1.94
2226 4436 7.068702 TCCATATCCATTTTTCAGGTTATGCT 58.931 34.615 0.00 0.00 36.73 3.79
2344 4562 1.073025 TTGGTTCGTGCCATCTGCT 59.927 52.632 1.93 0.00 42.00 4.24
2394 4612 9.339492 CAAAAGATAGAAAGAGCATTCAAACTC 57.661 33.333 0.00 0.00 0.00 3.01
2402 4620 5.847670 AGAGCATTCAAACTCGAACTTAC 57.152 39.130 0.00 0.00 37.99 2.34
2450 4687 1.202592 TGCACGCTGTTGTCTTAGGAA 60.203 47.619 0.00 0.00 0.00 3.36
2472 4709 6.805760 GGAATTTCTTCTTTTGACTGATCAGC 59.194 38.462 22.83 15.26 35.83 4.26
2487 4740 0.949397 TCAGCTCAGCTTTGTGCAAG 59.051 50.000 0.00 0.00 45.94 4.01
2498 4751 3.779759 CTTTGTGCAAGTAAAACCAGCA 58.220 40.909 0.00 0.00 0.00 4.41
2501 4754 4.193826 TGTGCAAGTAAAACCAGCAAAA 57.806 36.364 0.00 0.00 36.91 2.44
2576 4837 5.874261 AGCACAAACCATATTTTATGTTGGC 59.126 36.000 0.00 0.00 32.26 4.52
2692 4955 6.916360 AATTGACCAACATGACCTTGTAAT 57.084 33.333 0.00 0.00 0.00 1.89
2713 4976 0.698818 AACCCACAGTCCCCTTCATC 59.301 55.000 0.00 0.00 0.00 2.92
2717 4980 0.107508 CACAGTCCCCTTCATCGCAT 60.108 55.000 0.00 0.00 0.00 4.73
2724 4987 2.771943 TCCCCTTCATCGCATAAAGAGT 59.228 45.455 0.00 0.00 0.00 3.24
2725 4988 3.964688 TCCCCTTCATCGCATAAAGAGTA 59.035 43.478 0.00 0.00 0.00 2.59
2727 4990 4.511826 CCCCTTCATCGCATAAAGAGTAAC 59.488 45.833 0.00 0.00 0.00 2.50
2740 5003 7.958025 GCATAAAGAGTAACGAAAGAAAGAAGG 59.042 37.037 0.00 0.00 0.00 3.46
2758 5021 8.664669 AAAGAAGGACAAACAATATAACCCAT 57.335 30.769 0.00 0.00 0.00 4.00
2810 5073 6.485984 TGTCAAATGTTTTGGCATTGCTTAAT 59.514 30.769 8.82 0.00 38.87 1.40
2954 5226 3.968724 GCTTGTGAGCTGTTACTTTTTCG 59.031 43.478 0.00 0.00 45.65 3.46
3030 5302 7.021998 AGTTAGAATGAAACTAAGGGAGCTT 57.978 36.000 0.00 0.00 35.44 3.74
3059 5331 4.216257 CGGTTTGAGATCAACTGTGGAAAT 59.784 41.667 0.00 0.00 35.28 2.17
3061 5333 6.072728 CGGTTTGAGATCAACTGTGGAAATTA 60.073 38.462 0.00 0.00 35.28 1.40
3095 5367 8.462143 TTTTCTTCATACTAGCTTAAGTCACG 57.538 34.615 4.02 0.00 0.00 4.35
3103 5375 2.561569 AGCTTAAGTCACGCAGTTTGT 58.438 42.857 4.02 0.00 41.61 2.83
3106 5378 4.211374 AGCTTAAGTCACGCAGTTTGTAAG 59.789 41.667 4.02 0.00 41.61 2.34
3107 5379 4.210537 GCTTAAGTCACGCAGTTTGTAAGA 59.789 41.667 4.02 0.00 41.61 2.10
3111 5383 3.936453 AGTCACGCAGTTTGTAAGAAACA 59.064 39.130 0.00 0.00 41.61 2.83
3118 5390 5.904080 CGCAGTTTGTAAGAAACAGAAGAAG 59.096 40.000 0.00 0.00 39.87 2.85
3132 5404 3.929610 CAGAAGAAGTTGCACTAGCCTAC 59.070 47.826 0.00 0.00 41.13 3.18
3133 5405 3.835395 AGAAGAAGTTGCACTAGCCTACT 59.165 43.478 0.00 0.00 41.13 2.57
3134 5406 4.284746 AGAAGAAGTTGCACTAGCCTACTT 59.715 41.667 9.44 9.44 43.17 2.24
3136 5408 3.263261 GAAGTTGCACTAGCCTACTTCC 58.737 50.000 18.74 8.32 45.70 3.46
3137 5409 2.541466 AGTTGCACTAGCCTACTTCCT 58.459 47.619 0.00 0.00 41.13 3.36
3138 5410 2.234908 AGTTGCACTAGCCTACTTCCTG 59.765 50.000 0.00 0.00 41.13 3.86
3139 5411 0.537188 TGCACTAGCCTACTTCCTGC 59.463 55.000 0.00 0.00 41.13 4.85
3140 5412 0.179070 GCACTAGCCTACTTCCTGCC 60.179 60.000 0.00 0.00 33.58 4.85
3141 5413 1.195115 CACTAGCCTACTTCCTGCCA 58.805 55.000 0.00 0.00 0.00 4.92
3142 5414 1.134670 CACTAGCCTACTTCCTGCCAC 60.135 57.143 0.00 0.00 0.00 5.01
3143 5415 1.273324 ACTAGCCTACTTCCTGCCACT 60.273 52.381 0.00 0.00 0.00 4.00
3148 5420 2.437413 CCTACTTCCTGCCACTTTTCC 58.563 52.381 0.00 0.00 0.00 3.13
3153 5425 0.843309 TCCTGCCACTTTTCCTGTGA 59.157 50.000 0.00 0.00 37.60 3.58
3167 5439 1.001974 CCTGTGATCACTCCAAACCGA 59.998 52.381 25.55 2.12 0.00 4.69
3179 5451 5.008217 CACTCCAAACCGATTTTGAACACTA 59.992 40.000 10.14 0.00 46.76 2.74
3190 5465 6.513393 CGATTTTGAACACTAAGTGAAAGCCT 60.513 38.462 0.00 0.00 36.96 4.58
3197 5472 5.491982 ACACTAAGTGAAAGCCTATGGAAG 58.508 41.667 0.00 0.00 36.96 3.46
3208 5483 5.736951 AGCCTATGGAAGATGTACTGATC 57.263 43.478 0.00 0.00 0.00 2.92
3210 5485 5.843421 AGCCTATGGAAGATGTACTGATCTT 59.157 40.000 7.90 7.90 43.92 2.40
3211 5486 5.931146 GCCTATGGAAGATGTACTGATCTTG 59.069 44.000 11.96 0.64 41.78 3.02
3214 5489 7.989741 CCTATGGAAGATGTACTGATCTTGTTT 59.010 37.037 11.96 1.68 41.78 2.83
3215 5490 7.856145 ATGGAAGATGTACTGATCTTGTTTC 57.144 36.000 11.96 0.31 41.78 2.78
3216 5491 7.009179 TGGAAGATGTACTGATCTTGTTTCT 57.991 36.000 11.96 0.00 41.78 2.52
3217 5492 6.875726 TGGAAGATGTACTGATCTTGTTTCTG 59.124 38.462 11.96 0.00 41.78 3.02
3218 5493 7.099764 GGAAGATGTACTGATCTTGTTTCTGA 58.900 38.462 11.96 0.00 41.78 3.27
3219 5494 7.768120 GGAAGATGTACTGATCTTGTTTCTGAT 59.232 37.037 11.96 0.00 41.78 2.90
3220 5495 8.715191 AAGATGTACTGATCTTGTTTCTGATC 57.285 34.615 7.46 0.00 40.49 2.92
3221 5496 7.845037 AGATGTACTGATCTTGTTTCTGATCA 58.155 34.615 0.00 0.00 44.43 2.92
3222 5497 8.484575 AGATGTACTGATCTTGTTTCTGATCAT 58.515 33.333 0.00 1.48 45.16 2.45
3223 5498 9.107177 GATGTACTGATCTTGTTTCTGATCATT 57.893 33.333 0.00 4.18 45.16 2.57
3224 5499 8.484641 TGTACTGATCTTGTTTCTGATCATTC 57.515 34.615 0.00 2.37 45.16 2.67
3225 5500 8.096414 TGTACTGATCTTGTTTCTGATCATTCA 58.904 33.333 0.00 4.37 45.16 2.57
3287 5564 6.679327 AATAACACGAAAAGGGCTAGAATC 57.321 37.500 0.00 0.00 0.00 2.52
3288 5565 3.983044 ACACGAAAAGGGCTAGAATCT 57.017 42.857 0.00 0.00 0.00 2.40
3289 5566 4.287766 ACACGAAAAGGGCTAGAATCTT 57.712 40.909 0.00 0.00 0.00 2.40
3290 5567 4.003648 ACACGAAAAGGGCTAGAATCTTG 58.996 43.478 0.00 0.00 0.00 3.02
3303 5580 6.366630 GCTAGAATCTTGTTGTTGTGACTTC 58.633 40.000 0.00 0.00 0.00 3.01
3305 5582 6.369059 AGAATCTTGTTGTTGTGACTTCAG 57.631 37.500 0.00 0.00 0.00 3.02
3307 5584 5.741388 ATCTTGTTGTTGTGACTTCAGAC 57.259 39.130 0.00 0.00 0.00 3.51
3310 5587 2.927477 TGTTGTTGTGACTTCAGACGAC 59.073 45.455 0.00 6.27 32.42 4.34
3312 5589 3.452755 TGTTGTGACTTCAGACGACAT 57.547 42.857 0.00 0.00 32.56 3.06
3332 5610 8.041323 ACGACATAGGGATTCCATTATTATGAC 58.959 37.037 4.80 0.00 33.37 3.06
3333 5611 8.040727 CGACATAGGGATTCCATTATTATGACA 58.959 37.037 4.80 0.00 33.37 3.58
3353 5631 8.743085 ATGACAATATATGCTCTCACTTTTGT 57.257 30.769 0.00 0.00 0.00 2.83
3354 5632 9.836864 ATGACAATATATGCTCTCACTTTTGTA 57.163 29.630 0.00 0.00 0.00 2.41
3390 5668 9.754382 AATGATGATTTGTGCATTTAATAGGTC 57.246 29.630 0.00 0.00 0.00 3.85
3414 5692 4.530875 CAAAATCAGCTGTCCCTAATCCT 58.469 43.478 14.67 0.00 0.00 3.24
3478 5756 8.887036 ACACAATGAATATACTTATTGCGAGA 57.113 30.769 0.00 0.00 34.69 4.04
3623 5904 7.078228 TCAGTTATATCAGTTCGATCATGACG 58.922 38.462 0.00 4.37 35.39 4.35
3739 6031 2.673200 GGGTCCTCTGCATGCAGGA 61.673 63.158 39.72 30.71 43.75 3.86
3799 6094 5.700402 AGATCAAAGCTGGTATAACTGGT 57.300 39.130 0.00 0.00 0.00 4.00
3888 6184 6.620877 AGAAACTGTGGTCTGGTATGAATA 57.379 37.500 0.00 0.00 0.00 1.75
3921 6217 6.241882 AGCTTTCTCCTTTATTACTCCCTC 57.758 41.667 0.00 0.00 0.00 4.30
3923 6219 5.602628 CTTTCTCCTTTATTACTCCCTCCG 58.397 45.833 0.00 0.00 0.00 4.63
3925 6221 4.617593 TCTCCTTTATTACTCCCTCCGTT 58.382 43.478 0.00 0.00 0.00 4.44
3926 6222 4.648307 TCTCCTTTATTACTCCCTCCGTTC 59.352 45.833 0.00 0.00 0.00 3.95
3927 6223 3.708121 TCCTTTATTACTCCCTCCGTTCC 59.292 47.826 0.00 0.00 0.00 3.62
3928 6224 3.181457 CCTTTATTACTCCCTCCGTTCCC 60.181 52.174 0.00 0.00 0.00 3.97
3929 6225 2.852714 TATTACTCCCTCCGTTCCCA 57.147 50.000 0.00 0.00 0.00 4.37
3930 6226 1.961133 ATTACTCCCTCCGTTCCCAA 58.039 50.000 0.00 0.00 0.00 4.12
3931 6227 1.732117 TTACTCCCTCCGTTCCCAAA 58.268 50.000 0.00 0.00 0.00 3.28
3932 6228 1.961133 TACTCCCTCCGTTCCCAAAT 58.039 50.000 0.00 0.00 0.00 2.32
3933 6229 1.961133 ACTCCCTCCGTTCCCAAATA 58.039 50.000 0.00 0.00 0.00 1.40
3934 6230 2.488836 ACTCCCTCCGTTCCCAAATAT 58.511 47.619 0.00 0.00 0.00 1.28
3935 6231 3.660959 ACTCCCTCCGTTCCCAAATATA 58.339 45.455 0.00 0.00 0.00 0.86
3936 6232 4.042174 ACTCCCTCCGTTCCCAAATATAA 58.958 43.478 0.00 0.00 0.00 0.98
3937 6233 4.102681 ACTCCCTCCGTTCCCAAATATAAG 59.897 45.833 0.00 0.00 0.00 1.73
3938 6234 4.042174 TCCCTCCGTTCCCAAATATAAGT 58.958 43.478 0.00 0.00 0.00 2.24
3939 6235 4.102054 TCCCTCCGTTCCCAAATATAAGTC 59.898 45.833 0.00 0.00 0.00 3.01
3940 6236 4.102681 CCCTCCGTTCCCAAATATAAGTCT 59.897 45.833 0.00 0.00 0.00 3.24
3941 6237 5.397559 CCCTCCGTTCCCAAATATAAGTCTT 60.398 44.000 0.00 0.00 0.00 3.01
3942 6238 6.120220 CCTCCGTTCCCAAATATAAGTCTTT 58.880 40.000 0.00 0.00 0.00 2.52
3943 6239 6.602009 CCTCCGTTCCCAAATATAAGTCTTTT 59.398 38.462 0.00 0.00 0.00 2.27
3944 6240 7.122204 CCTCCGTTCCCAAATATAAGTCTTTTT 59.878 37.037 0.00 0.00 0.00 1.94
3945 6241 9.169592 CTCCGTTCCCAAATATAAGTCTTTTTA 57.830 33.333 0.00 0.00 0.00 1.52
3946 6242 9.169592 TCCGTTCCCAAATATAAGTCTTTTTAG 57.830 33.333 0.00 0.00 0.00 1.85
3947 6243 9.169592 CCGTTCCCAAATATAAGTCTTTTTAGA 57.830 33.333 0.00 0.00 0.00 2.10
3960 6256 7.751768 AGTCTTTTTAGAGATTCCAACAAGG 57.248 36.000 0.00 0.00 39.47 3.61
3961 6257 6.717084 AGTCTTTTTAGAGATTCCAACAAGGG 59.283 38.462 0.00 0.00 38.24 3.95
3962 6258 6.715264 GTCTTTTTAGAGATTCCAACAAGGGA 59.285 38.462 0.00 0.00 38.24 4.20
3963 6259 6.715264 TCTTTTTAGAGATTCCAACAAGGGAC 59.285 38.462 0.00 0.00 36.46 4.46
3965 6261 6.945636 TTTAGAGATTCCAACAAGGGACTA 57.054 37.500 0.00 0.00 38.49 2.59
3966 6262 4.828072 AGAGATTCCAACAAGGGACTAC 57.172 45.455 0.00 0.00 38.49 2.73
3967 6263 4.168101 AGAGATTCCAACAAGGGACTACA 58.832 43.478 0.00 0.00 38.49 2.74
3968 6264 4.785376 AGAGATTCCAACAAGGGACTACAT 59.215 41.667 0.00 0.00 38.49 2.29
3969 6265 5.964477 AGAGATTCCAACAAGGGACTACATA 59.036 40.000 0.00 0.00 38.49 2.29
3970 6266 5.990668 AGATTCCAACAAGGGACTACATAC 58.009 41.667 0.00 0.00 38.49 2.39
3971 6267 3.880047 TCCAACAAGGGACTACATACG 57.120 47.619 0.00 0.00 38.49 3.06
3972 6268 2.498481 TCCAACAAGGGACTACATACGG 59.502 50.000 0.00 0.00 38.49 4.02
3973 6269 2.498481 CCAACAAGGGACTACATACGGA 59.502 50.000 0.00 0.00 38.49 4.69
3974 6270 3.430374 CCAACAAGGGACTACATACGGAG 60.430 52.174 0.00 0.00 38.49 4.63
3975 6271 1.755380 ACAAGGGACTACATACGGAGC 59.245 52.381 0.00 0.00 38.49 4.70
3976 6272 1.754803 CAAGGGACTACATACGGAGCA 59.245 52.381 0.00 0.00 38.49 4.26
3977 6273 2.154567 AGGGACTACATACGGAGCAA 57.845 50.000 0.00 0.00 36.02 3.91
3978 6274 2.463752 AGGGACTACATACGGAGCAAA 58.536 47.619 0.00 0.00 36.02 3.68
3979 6275 2.835764 AGGGACTACATACGGAGCAAAA 59.164 45.455 0.00 0.00 36.02 2.44
3980 6276 3.454812 AGGGACTACATACGGAGCAAAAT 59.545 43.478 0.00 0.00 36.02 1.82
3981 6277 3.560068 GGGACTACATACGGAGCAAAATG 59.440 47.826 0.00 0.00 0.00 2.32
3982 6278 4.439057 GGACTACATACGGAGCAAAATGA 58.561 43.478 0.00 0.00 0.00 2.57
3983 6279 4.873827 GGACTACATACGGAGCAAAATGAA 59.126 41.667 0.00 0.00 0.00 2.57
3984 6280 5.527582 GGACTACATACGGAGCAAAATGAAT 59.472 40.000 0.00 0.00 0.00 2.57
3985 6281 6.363577 ACTACATACGGAGCAAAATGAATG 57.636 37.500 0.00 0.00 0.00 2.67
3986 6282 6.112734 ACTACATACGGAGCAAAATGAATGA 58.887 36.000 0.00 0.00 0.00 2.57
3987 6283 5.895636 ACATACGGAGCAAAATGAATGAA 57.104 34.783 0.00 0.00 0.00 2.57
3988 6284 6.455360 ACATACGGAGCAAAATGAATGAAT 57.545 33.333 0.00 0.00 0.00 2.57
3989 6285 6.498304 ACATACGGAGCAAAATGAATGAATC 58.502 36.000 0.00 0.00 0.00 2.52
3990 6286 6.319658 ACATACGGAGCAAAATGAATGAATCT 59.680 34.615 0.00 0.00 0.00 2.40
3991 6287 7.498900 ACATACGGAGCAAAATGAATGAATCTA 59.501 33.333 0.00 0.00 0.00 1.98
3992 6288 6.124088 ACGGAGCAAAATGAATGAATCTAC 57.876 37.500 0.00 0.00 0.00 2.59
3993 6289 5.647658 ACGGAGCAAAATGAATGAATCTACA 59.352 36.000 0.00 0.00 0.00 2.74
3994 6290 5.967674 CGGAGCAAAATGAATGAATCTACAC 59.032 40.000 0.00 0.00 0.00 2.90
3995 6291 6.183360 CGGAGCAAAATGAATGAATCTACACT 60.183 38.462 0.00 0.00 0.00 3.55
3996 6292 7.192232 GGAGCAAAATGAATGAATCTACACTC 58.808 38.462 0.00 0.00 0.00 3.51
3997 6293 7.066766 GGAGCAAAATGAATGAATCTACACTCT 59.933 37.037 0.00 0.00 0.00 3.24
3998 6294 9.102757 GAGCAAAATGAATGAATCTACACTCTA 57.897 33.333 0.00 0.00 0.00 2.43
3999 6295 9.453572 AGCAAAATGAATGAATCTACACTCTAA 57.546 29.630 0.00 0.00 0.00 2.10
4037 6333 9.706691 ATACTTCCGTATATTGTAGTCCATTTG 57.293 33.333 0.00 0.00 34.63 2.32
4038 6334 7.788026 ACTTCCGTATATTGTAGTCCATTTGA 58.212 34.615 0.00 0.00 0.00 2.69
4039 6335 8.262227 ACTTCCGTATATTGTAGTCCATTTGAA 58.738 33.333 0.00 0.00 0.00 2.69
4040 6336 9.104965 CTTCCGTATATTGTAGTCCATTTGAAA 57.895 33.333 0.00 0.00 0.00 2.69
4041 6337 9.621629 TTCCGTATATTGTAGTCCATTTGAAAT 57.378 29.630 0.00 0.00 0.00 2.17
4042 6338 9.268268 TCCGTATATTGTAGTCCATTTGAAATC 57.732 33.333 0.00 0.00 0.00 2.17
4043 6339 9.273016 CCGTATATTGTAGTCCATTTGAAATCT 57.727 33.333 0.00 0.00 0.00 2.40
4048 6344 8.868522 ATTGTAGTCCATTTGAAATCTCTGAA 57.131 30.769 0.00 0.00 0.00 3.02
4049 6345 8.690203 TTGTAGTCCATTTGAAATCTCTGAAA 57.310 30.769 0.00 0.00 0.00 2.69
4050 6346 8.690203 TGTAGTCCATTTGAAATCTCTGAAAA 57.310 30.769 0.00 0.00 0.00 2.29
4051 6347 8.786898 TGTAGTCCATTTGAAATCTCTGAAAAG 58.213 33.333 0.00 0.00 0.00 2.27
4052 6348 9.003658 GTAGTCCATTTGAAATCTCTGAAAAGA 57.996 33.333 0.00 0.00 0.00 2.52
4053 6349 7.880105 AGTCCATTTGAAATCTCTGAAAAGAC 58.120 34.615 0.00 0.00 0.00 3.01
4054 6350 7.723172 AGTCCATTTGAAATCTCTGAAAAGACT 59.277 33.333 0.00 0.00 0.00 3.24
4055 6351 8.355913 GTCCATTTGAAATCTCTGAAAAGACTT 58.644 33.333 0.00 0.00 0.00 3.01
4056 6352 9.573166 TCCATTTGAAATCTCTGAAAAGACTTA 57.427 29.630 0.00 0.00 0.00 2.24
4078 6374 9.294614 ACTTATACTACTATTTAGGAACGGAGG 57.705 37.037 0.00 0.00 0.00 4.30
4079 6375 8.641498 TTATACTACTATTTAGGAACGGAGGG 57.359 38.462 0.00 0.00 0.00 4.30
4080 6376 5.134725 ACTACTATTTAGGAACGGAGGGA 57.865 43.478 0.00 0.00 0.00 4.20
4081 6377 5.139001 ACTACTATTTAGGAACGGAGGGAG 58.861 45.833 0.00 0.00 0.00 4.30
4082 6378 3.991683 ACTATTTAGGAACGGAGGGAGT 58.008 45.455 0.00 0.00 0.00 3.85
4097 6393 1.089920 GGAGTACTTGGCACTGCATG 58.910 55.000 2.82 0.00 34.75 4.06
4101 6397 0.692476 TACTTGGCACTGCATGGACT 59.308 50.000 2.82 0.00 0.00 3.85
4169 6465 2.710377 TGCACTTTCCGCAGAATGTAT 58.290 42.857 1.25 0.00 38.07 2.29
4188 6484 2.787473 TCGTTGGATTTGATCTGCCT 57.213 45.000 0.00 0.00 0.00 4.75
4200 6496 0.681733 ATCTGCCTGTCGACTTGTGT 59.318 50.000 17.92 0.00 0.00 3.72
4205 6501 1.217882 CCTGTCGACTTGTGTTGTCC 58.782 55.000 17.92 0.00 0.00 4.02
4223 6519 0.040067 CCGCAAGTGAAACAAGAGCC 60.040 55.000 0.00 0.00 41.43 4.70
4266 6562 1.007848 TGCAATTCCGCGCACAATTG 61.008 50.000 25.94 25.94 41.20 2.32
4307 6603 7.446769 TGTGTACTATTCTTGTAAGCTGGAAA 58.553 34.615 0.00 0.00 0.00 3.13
4396 6692 9.151471 GTGTTTCTGTCAGATAAAGCTGTAATA 57.849 33.333 2.68 0.00 37.20 0.98
4406 6702 9.566432 CAGATAAAGCTGTAATATCCCTCTTTT 57.434 33.333 0.00 0.00 0.00 2.27
4427 6723 2.429971 TCTGCAACATGTGGCTGAAAAA 59.570 40.909 27.14 9.27 35.46 1.94
4428 6724 2.540931 CTGCAACATGTGGCTGAAAAAC 59.459 45.455 25.30 0.00 0.00 2.43
4429 6725 2.093816 TGCAACATGTGGCTGAAAAACA 60.094 40.909 25.30 0.00 0.00 2.83
4430 6726 2.284952 GCAACATGTGGCTGAAAAACAC 59.715 45.455 18.41 0.00 35.75 3.32
4460 6757 9.537848 AGTTTATGTTGAATAATCGTCGTTTTC 57.462 29.630 0.00 0.00 0.00 2.29
4473 6780 0.107848 CGTTTTCCCCCAGCTACGAT 60.108 55.000 0.00 0.00 0.00 3.73
4481 6788 1.066143 CCCCAGCTACGATGAAACTGT 60.066 52.381 0.00 0.00 0.00 3.55
4483 6790 3.187700 CCCAGCTACGATGAAACTGTAC 58.812 50.000 0.00 0.00 0.00 2.90
4498 6805 4.073293 ACTGTACCACTGGTGAAGAAAG 57.927 45.455 11.32 0.00 36.19 2.62
4503 6810 3.016736 ACCACTGGTGAAGAAAGTTGTG 58.983 45.455 0.00 0.00 32.98 3.33
4507 6814 5.163519 CCACTGGTGAAGAAAGTTGTGAATT 60.164 40.000 1.93 0.00 0.00 2.17
4510 6818 6.378280 ACTGGTGAAGAAAGTTGTGAATTCTT 59.622 34.615 7.05 0.00 43.93 2.52
4512 6820 8.287439 TGGTGAAGAAAGTTGTGAATTCTTTA 57.713 30.769 7.05 0.00 41.96 1.85
4540 6848 9.547753 TCTTAATCAAAGAACATATCTACAGGC 57.452 33.333 0.00 0.00 41.35 4.85
4544 6852 6.270815 TCAAAGAACATATCTACAGGCGTAC 58.729 40.000 0.00 0.00 37.42 3.67
4550 6858 2.667473 ATCTACAGGCGTACAACCAC 57.333 50.000 4.83 0.00 0.00 4.16
4583 6891 2.146342 CCACGTGAGATTTTCAGTGCT 58.854 47.619 19.30 0.00 36.21 4.40
4589 6897 4.214437 GTGAGATTTTCAGTGCTTGAACG 58.786 43.478 4.08 0.00 45.22 3.95
4606 6915 3.181501 TGAACGAACAGGCTTTGAAGTTG 60.182 43.478 0.00 0.00 0.00 3.16
4626 6935 7.421530 AGTTGTACAAGTTGCATACAAGTAG 57.578 36.000 18.30 0.00 39.53 2.57
4627 6936 6.990349 AGTTGTACAAGTTGCATACAAGTAGT 59.010 34.615 18.30 3.18 39.53 2.73
4628 6937 8.145767 AGTTGTACAAGTTGCATACAAGTAGTA 58.854 33.333 18.30 0.00 39.53 1.82
4629 6938 8.433126 GTTGTACAAGTTGCATACAAGTAGTAG 58.567 37.037 8.98 0.00 38.98 2.57
4630 6939 6.588756 TGTACAAGTTGCATACAAGTAGTAGC 59.411 38.462 1.81 0.00 38.53 3.58
4631 6940 5.547465 ACAAGTTGCATACAAGTAGTAGCA 58.453 37.500 1.81 0.00 38.53 3.49
4632 6941 5.639506 ACAAGTTGCATACAAGTAGTAGCAG 59.360 40.000 1.81 0.00 38.53 4.24
4633 6942 5.661056 AGTTGCATACAAGTAGTAGCAGA 57.339 39.130 0.00 0.00 37.68 4.26
4634 6943 5.655488 AGTTGCATACAAGTAGTAGCAGAG 58.345 41.667 0.00 0.00 37.68 3.35
4635 6944 4.046938 TGCATACAAGTAGTAGCAGAGC 57.953 45.455 0.00 0.00 35.85 4.09
4636 6945 3.701542 TGCATACAAGTAGTAGCAGAGCT 59.298 43.478 0.00 0.00 43.41 4.09
4637 6946 4.887655 TGCATACAAGTAGTAGCAGAGCTA 59.112 41.667 0.00 0.00 40.44 3.32
4650 6959 4.841422 AGCAGAGCTACATCAAAATGACT 58.159 39.130 0.00 0.00 36.99 3.41
4651 6960 4.634883 AGCAGAGCTACATCAAAATGACTG 59.365 41.667 0.00 0.00 36.99 3.51
4652 6961 4.201891 GCAGAGCTACATCAAAATGACTGG 60.202 45.833 0.00 0.00 36.67 4.00
4653 6962 4.334759 CAGAGCTACATCAAAATGACTGGG 59.665 45.833 0.00 0.00 36.67 4.45
4654 6963 3.019564 AGCTACATCAAAATGACTGGGC 58.980 45.455 0.00 0.00 36.67 5.36
4655 6964 2.223340 GCTACATCAAAATGACTGGGCG 60.223 50.000 0.00 0.00 36.67 6.13
4656 6965 1.176527 ACATCAAAATGACTGGGCGG 58.823 50.000 0.00 0.00 36.67 6.13
4657 6966 0.457035 CATCAAAATGACTGGGCGGG 59.543 55.000 0.00 0.00 34.61 6.13
4658 6967 1.322538 ATCAAAATGACTGGGCGGGC 61.323 55.000 0.00 0.00 0.00 6.13
4659 6968 2.679996 AAAATGACTGGGCGGGCC 60.680 61.111 14.65 14.65 0.00 5.80
4660 6969 3.521765 AAAATGACTGGGCGGGCCA 62.522 57.895 22.99 22.99 37.98 5.36
4661 6970 3.944250 AAATGACTGGGCGGGCCAG 62.944 63.158 39.67 39.67 40.72 4.85
4669 6978 4.722700 GGCGGGCCAGCTTGAAGA 62.723 66.667 27.28 0.00 37.29 2.87
4670 6979 2.672996 GCGGGCCAGCTTGAAGAA 60.673 61.111 21.61 0.00 0.00 2.52
4671 6980 2.268076 GCGGGCCAGCTTGAAGAAA 61.268 57.895 21.61 0.00 0.00 2.52
4672 6981 1.878775 CGGGCCAGCTTGAAGAAAG 59.121 57.895 4.39 0.00 39.07 2.62
4682 6991 3.436700 CTTGAAGAAAGCCCAACGTTT 57.563 42.857 0.00 0.00 0.00 3.60
4683 6992 3.780902 CTTGAAGAAAGCCCAACGTTTT 58.219 40.909 0.00 0.00 0.00 2.43
4684 6993 3.878160 TGAAGAAAGCCCAACGTTTTT 57.122 38.095 0.00 0.00 0.00 1.94
4698 7007 4.826248 TTTTTACCTCCACGGCCC 57.174 55.556 0.00 0.00 35.61 5.80
4699 7008 1.844839 TTTTTACCTCCACGGCCCA 59.155 52.632 0.00 0.00 35.61 5.36
4700 7009 0.406361 TTTTTACCTCCACGGCCCAT 59.594 50.000 0.00 0.00 35.61 4.00
4701 7010 0.406361 TTTTACCTCCACGGCCCATT 59.594 50.000 0.00 0.00 35.61 3.16
4702 7011 0.406361 TTTACCTCCACGGCCCATTT 59.594 50.000 0.00 0.00 35.61 2.32
4703 7012 0.034863 TTACCTCCACGGCCCATTTC 60.035 55.000 0.00 0.00 35.61 2.17
4704 7013 0.912487 TACCTCCACGGCCCATTTCT 60.912 55.000 0.00 0.00 35.61 2.52
4705 7014 1.750399 CCTCCACGGCCCATTTCTG 60.750 63.158 0.00 0.00 0.00 3.02
4706 7015 2.361104 TCCACGGCCCATTTCTGC 60.361 61.111 0.00 0.00 0.00 4.26
4707 7016 3.451894 CCACGGCCCATTTCTGCC 61.452 66.667 0.00 0.00 44.41 4.85
4708 7017 2.361610 CACGGCCCATTTCTGCCT 60.362 61.111 0.00 0.00 45.71 4.75
4709 7018 1.077787 CACGGCCCATTTCTGCCTA 60.078 57.895 0.00 0.00 45.71 3.93
4710 7019 0.679640 CACGGCCCATTTCTGCCTAA 60.680 55.000 0.00 0.00 45.71 2.69
4711 7020 0.039035 ACGGCCCATTTCTGCCTAAA 59.961 50.000 0.00 0.00 45.71 1.85
4712 7021 0.740737 CGGCCCATTTCTGCCTAAAG 59.259 55.000 0.00 0.00 45.71 1.85
4713 7022 1.114627 GGCCCATTTCTGCCTAAAGG 58.885 55.000 0.00 0.00 44.46 3.11
4726 7035 1.066215 CCTAAAGGCCCATTGGTTTGC 60.066 52.381 0.00 0.00 0.00 3.68
4727 7036 1.622811 CTAAAGGCCCATTGGTTTGCA 59.377 47.619 0.00 0.00 0.00 4.08
4728 7037 0.397564 AAAGGCCCATTGGTTTGCAG 59.602 50.000 0.00 0.00 0.00 4.41
4729 7038 2.046988 GGCCCATTGGTTTGCAGC 60.047 61.111 1.20 0.00 0.00 5.25
4730 7039 2.742403 GCCCATTGGTTTGCAGCA 59.258 55.556 1.20 0.00 0.00 4.41
4731 7040 1.071128 GCCCATTGGTTTGCAGCAA 59.929 52.632 2.83 2.83 44.40 3.91
4732 7041 0.534652 GCCCATTGGTTTGCAGCAAA 60.535 50.000 16.93 16.93 43.52 3.68
4733 7042 1.964552 CCCATTGGTTTGCAGCAAAA 58.035 45.000 22.26 7.68 43.52 2.44
4734 7043 1.603326 CCCATTGGTTTGCAGCAAAAC 59.397 47.619 26.42 26.42 43.52 2.43
4735 7044 2.563702 CCATTGGTTTGCAGCAAAACT 58.436 42.857 31.18 13.81 43.52 2.66
4743 7052 4.362476 CAGCAAAACTGGGCGGGC 62.362 66.667 0.00 0.00 43.19 6.13
4746 7055 3.989787 CAAAACTGGGCGGGCCAC 61.990 66.667 20.63 0.00 37.98 5.01
4747 7056 4.531426 AAAACTGGGCGGGCCACA 62.531 61.111 20.63 5.72 37.98 4.17
4748 7057 4.974721 AAACTGGGCGGGCCACAG 62.975 66.667 20.63 19.91 39.04 3.66
4759 7068 2.029518 GCCACAGCCCAGTTTTGC 59.970 61.111 0.00 0.00 0.00 3.68
4760 7069 2.501602 GCCACAGCCCAGTTTTGCT 61.502 57.895 0.00 0.00 38.67 3.91
4761 7070 2.031674 GCCACAGCCCAGTTTTGCTT 62.032 55.000 0.00 0.00 35.12 3.91
4762 7071 0.249573 CCACAGCCCAGTTTTGCTTG 60.250 55.000 0.00 0.00 35.12 4.01
4763 7072 0.877213 CACAGCCCAGTTTTGCTTGC 60.877 55.000 0.00 0.00 35.12 4.01
4764 7073 1.329171 ACAGCCCAGTTTTGCTTGCA 61.329 50.000 0.00 0.00 35.12 4.08
4765 7074 0.877213 CAGCCCAGTTTTGCTTGCAC 60.877 55.000 0.00 0.00 35.12 4.57
4766 7075 1.044790 AGCCCAGTTTTGCTTGCACT 61.045 50.000 0.00 0.00 32.94 4.40
4767 7076 0.673437 GCCCAGTTTTGCTTGCACTA 59.327 50.000 0.00 0.00 0.00 2.74
4768 7077 1.068434 GCCCAGTTTTGCTTGCACTAA 59.932 47.619 0.00 0.00 0.00 2.24
4769 7078 2.863704 GCCCAGTTTTGCTTGCACTAAG 60.864 50.000 0.00 0.00 39.49 2.18
4776 7085 3.490890 CTTGCACTAAGCTCCGCC 58.509 61.111 0.00 0.00 45.94 6.13
4777 7086 1.375908 CTTGCACTAAGCTCCGCCA 60.376 57.895 0.00 0.00 45.94 5.69
4778 7087 1.364626 CTTGCACTAAGCTCCGCCAG 61.365 60.000 0.00 0.00 45.94 4.85
4779 7088 2.111999 TTGCACTAAGCTCCGCCAGT 62.112 55.000 0.00 0.00 45.94 4.00
4780 7089 2.103042 GCACTAAGCTCCGCCAGTG 61.103 63.158 11.62 11.62 41.78 3.66
4781 7090 2.103042 CACTAAGCTCCGCCAGTGC 61.103 63.158 0.00 0.00 36.07 4.40
4782 7091 2.265739 CTAAGCTCCGCCAGTGCA 59.734 61.111 0.00 0.00 37.44 4.57
4783 7092 1.153289 CTAAGCTCCGCCAGTGCAT 60.153 57.895 0.00 0.00 37.44 3.96
4784 7093 0.104855 CTAAGCTCCGCCAGTGCATA 59.895 55.000 0.00 0.00 37.44 3.14
4785 7094 0.179084 TAAGCTCCGCCAGTGCATAC 60.179 55.000 0.00 0.00 37.44 2.39
4786 7095 2.125147 GCTCCGCCAGTGCATACA 60.125 61.111 0.00 0.00 37.32 2.29
4787 7096 1.745115 GCTCCGCCAGTGCATACAA 60.745 57.895 0.00 0.00 37.32 2.41
4788 7097 1.709147 GCTCCGCCAGTGCATACAAG 61.709 60.000 0.00 0.00 37.32 3.16
4789 7098 0.391661 CTCCGCCAGTGCATACAAGT 60.392 55.000 0.00 0.00 37.32 3.16
4790 7099 0.899019 TCCGCCAGTGCATACAAGTA 59.101 50.000 0.00 0.00 37.32 2.24
4791 7100 1.006832 CCGCCAGTGCATACAAGTAC 58.993 55.000 0.00 0.00 37.32 2.73
4792 7101 1.006832 CGCCAGTGCATACAAGTACC 58.993 55.000 0.00 0.00 37.32 3.34
4793 7102 1.405526 CGCCAGTGCATACAAGTACCT 60.406 52.381 0.00 0.00 37.32 3.08
4794 7103 2.280628 GCCAGTGCATACAAGTACCTC 58.719 52.381 0.00 0.00 37.47 3.85
4795 7104 2.354704 GCCAGTGCATACAAGTACCTCA 60.355 50.000 0.00 0.00 37.47 3.86
4796 7105 3.682718 GCCAGTGCATACAAGTACCTCAT 60.683 47.826 0.00 0.00 37.47 2.90
4797 7106 4.517285 CCAGTGCATACAAGTACCTCATT 58.483 43.478 0.00 0.00 0.00 2.57
4798 7107 4.943705 CCAGTGCATACAAGTACCTCATTT 59.056 41.667 0.00 0.00 0.00 2.32
4799 7108 5.065218 CCAGTGCATACAAGTACCTCATTTC 59.935 44.000 0.00 0.00 0.00 2.17
4800 7109 5.643348 CAGTGCATACAAGTACCTCATTTCA 59.357 40.000 0.00 0.00 0.00 2.69
4801 7110 5.877012 AGTGCATACAAGTACCTCATTTCAG 59.123 40.000 0.00 0.00 0.00 3.02
4802 7111 5.643777 GTGCATACAAGTACCTCATTTCAGT 59.356 40.000 0.00 0.00 0.00 3.41
4803 7112 5.643348 TGCATACAAGTACCTCATTTCAGTG 59.357 40.000 0.00 0.00 0.00 3.66
4804 7113 5.447818 GCATACAAGTACCTCATTTCAGTGC 60.448 44.000 0.00 0.00 0.00 4.40
4805 7114 4.085357 ACAAGTACCTCATTTCAGTGCA 57.915 40.909 0.00 0.00 0.00 4.57
4806 7115 4.655963 ACAAGTACCTCATTTCAGTGCAT 58.344 39.130 0.00 0.00 0.00 3.96
4807 7116 4.456911 ACAAGTACCTCATTTCAGTGCATG 59.543 41.667 0.00 0.00 0.00 4.06
4808 7117 4.558226 AGTACCTCATTTCAGTGCATGA 57.442 40.909 0.00 5.12 35.62 3.07
4809 7118 4.910195 AGTACCTCATTTCAGTGCATGAA 58.090 39.130 0.00 7.27 46.31 2.57
4817 7126 1.608055 TCAGTGCATGAACCAACAGG 58.392 50.000 0.00 0.00 34.02 4.00
4818 7127 0.038892 CAGTGCATGAACCAACAGGC 60.039 55.000 0.00 0.00 45.77 4.85
4819 7128 0.178981 AGTGCATGAACCAACAGGCT 60.179 50.000 0.00 0.00 45.76 4.58
4820 7129 0.675633 GTGCATGAACCAACAGGCTT 59.324 50.000 0.00 0.00 45.76 4.35
4821 7130 1.069049 GTGCATGAACCAACAGGCTTT 59.931 47.619 0.00 0.00 45.76 3.51
4822 7131 1.068895 TGCATGAACCAACAGGCTTTG 59.931 47.619 0.00 0.00 45.76 2.77
4823 7132 1.340889 GCATGAACCAACAGGCTTTGA 59.659 47.619 0.00 0.00 42.93 2.69
4824 7133 2.224018 GCATGAACCAACAGGCTTTGAA 60.224 45.455 0.00 0.00 42.93 2.69
4825 7134 3.645884 CATGAACCAACAGGCTTTGAAG 58.354 45.455 9.90 0.00 0.00 3.02
4826 7135 2.733956 TGAACCAACAGGCTTTGAAGT 58.266 42.857 9.90 0.00 0.00 3.01
4827 7136 3.096092 TGAACCAACAGGCTTTGAAGTT 58.904 40.909 9.90 7.13 0.00 2.66
4828 7137 3.119173 TGAACCAACAGGCTTTGAAGTTG 60.119 43.478 7.48 7.48 40.63 3.16
4834 7143 4.632538 ACAGGCTTTGAAGTTGTACAAC 57.367 40.909 27.72 27.72 41.45 3.32
4847 7156 1.133598 TGTACAACTATCTCACGGCCG 59.866 52.381 26.86 26.86 0.00 6.13
4856 7165 1.153647 CTCACGGCCGCATACTCAA 60.154 57.895 28.58 0.29 0.00 3.02
4862 7171 1.526887 CGGCCGCATACTCAAATACAG 59.473 52.381 14.67 0.00 0.00 2.74
4865 7174 3.493699 GGCCGCATACTCAAATACAGGTA 60.494 47.826 0.00 0.00 0.00 3.08
4867 7176 4.755123 GCCGCATACTCAAATACAGGTATT 59.245 41.667 0.00 0.00 37.36 1.89
4964 7273 8.579682 TCTTGATGTATTCATAGATGTGTTCG 57.420 34.615 0.00 0.00 33.34 3.95
5000 7309 1.554160 CTCTCCTGCTGGATGAAGTGT 59.446 52.381 13.33 0.00 42.29 3.55
5007 7316 0.107508 CTGGATGAAGTGTCCGGCAT 60.108 55.000 0.00 0.00 38.64 4.40
5214 7526 3.423539 TCAGAGGTCACAATTTCCTGG 57.576 47.619 0.00 0.00 0.00 4.45
5318 7630 6.351371 CCAGTGCCACCGATATATCTAGAATT 60.351 42.308 10.93 0.00 0.00 2.17
5388 7700 3.571401 GGAGGGTTTATGAATCATGGCAG 59.429 47.826 5.91 0.00 0.00 4.85
5438 7750 9.197694 GTGAGATCATTATTATGGTATATCGCC 57.802 37.037 0.00 0.00 32.40 5.54
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
130 1867 3.866449 GCTTCGAGGTGAATCCACTCTTT 60.866 47.826 0.00 0.00 42.77 2.52
698 2435 0.686441 AGTGTGCCTATACAGCCGGA 60.686 55.000 5.05 0.00 0.00 5.14
776 2513 4.082523 CGGTGAGGTGGTGCCGAT 62.083 66.667 0.00 0.00 46.33 4.18
810 2547 1.269413 TGACAAACGAGACGAAGGGTC 60.269 52.381 0.00 0.00 46.45 4.46
811 2548 0.748450 TGACAAACGAGACGAAGGGT 59.252 50.000 0.00 0.00 0.00 4.34
812 2549 1.137513 GTGACAAACGAGACGAAGGG 58.862 55.000 0.00 0.00 0.00 3.95
823 2560 3.754850 ACTAATTAAGGGCCGTGACAAAC 59.245 43.478 0.90 0.00 0.00 2.93
824 2561 3.754323 CACTAATTAAGGGCCGTGACAAA 59.246 43.478 0.90 0.00 0.00 2.83
825 2562 3.340034 CACTAATTAAGGGCCGTGACAA 58.660 45.455 0.90 0.00 0.00 3.18
826 2563 2.355310 CCACTAATTAAGGGCCGTGACA 60.355 50.000 0.90 0.00 0.00 3.58
827 2564 2.285977 CCACTAATTAAGGGCCGTGAC 58.714 52.381 0.90 0.00 0.00 3.67
828 2565 1.910671 ACCACTAATTAAGGGCCGTGA 59.089 47.619 0.90 0.00 0.00 4.35
829 2566 2.413310 ACCACTAATTAAGGGCCGTG 57.587 50.000 0.90 0.00 0.00 4.94
830 2567 3.349927 GAAACCACTAATTAAGGGCCGT 58.650 45.455 0.00 0.00 0.00 5.68
831 2568 2.353579 CGAAACCACTAATTAAGGGCCG 59.646 50.000 0.00 5.07 0.00 6.13
832 2569 3.349927 ACGAAACCACTAATTAAGGGCC 58.650 45.455 0.00 0.00 0.00 5.80
833 2570 3.063045 CGACGAAACCACTAATTAAGGGC 59.937 47.826 8.13 0.00 0.00 5.19
834 2571 4.248058 ACGACGAAACCACTAATTAAGGG 58.752 43.478 0.00 4.94 0.00 3.95
835 2572 5.851047 AACGACGAAACCACTAATTAAGG 57.149 39.130 0.00 2.80 0.00 2.69
836 2573 7.346695 TCAAAACGACGAAACCACTAATTAAG 58.653 34.615 0.00 0.00 0.00 1.85
837 2574 7.224362 TCTCAAAACGACGAAACCACTAATTAA 59.776 33.333 0.00 0.00 0.00 1.40
838 2575 6.700960 TCTCAAAACGACGAAACCACTAATTA 59.299 34.615 0.00 0.00 0.00 1.40
839 2576 5.524646 TCTCAAAACGACGAAACCACTAATT 59.475 36.000 0.00 0.00 0.00 1.40
840 2577 5.051816 TCTCAAAACGACGAAACCACTAAT 58.948 37.500 0.00 0.00 0.00 1.73
841 2578 4.431809 TCTCAAAACGACGAAACCACTAA 58.568 39.130 0.00 0.00 0.00 2.24
842 2579 4.044336 TCTCAAAACGACGAAACCACTA 57.956 40.909 0.00 0.00 0.00 2.74
843 2580 2.896168 TCTCAAAACGACGAAACCACT 58.104 42.857 0.00 0.00 0.00 4.00
844 2581 3.001939 ACATCTCAAAACGACGAAACCAC 59.998 43.478 0.00 0.00 0.00 4.16
845 2582 3.199677 ACATCTCAAAACGACGAAACCA 58.800 40.909 0.00 0.00 0.00 3.67
846 2583 3.872560 ACATCTCAAAACGACGAAACC 57.127 42.857 0.00 0.00 0.00 3.27
847 2584 5.912528 ACATACATCTCAAAACGACGAAAC 58.087 37.500 0.00 0.00 0.00 2.78
848 2585 7.085746 TCTACATACATCTCAAAACGACGAAA 58.914 34.615 0.00 0.00 0.00 3.46
849 2586 6.614160 TCTACATACATCTCAAAACGACGAA 58.386 36.000 0.00 0.00 0.00 3.85
850 2587 6.185852 TCTACATACATCTCAAAACGACGA 57.814 37.500 0.00 0.00 0.00 4.20
851 2588 6.020599 CCTTCTACATACATCTCAAAACGACG 60.021 42.308 0.00 0.00 0.00 5.12
852 2589 6.255887 CCCTTCTACATACATCTCAAAACGAC 59.744 42.308 0.00 0.00 0.00 4.34
853 2590 6.338146 CCCTTCTACATACATCTCAAAACGA 58.662 40.000 0.00 0.00 0.00 3.85
854 2591 5.006746 GCCCTTCTACATACATCTCAAAACG 59.993 44.000 0.00 0.00 0.00 3.60
855 2592 5.297029 GGCCCTTCTACATACATCTCAAAAC 59.703 44.000 0.00 0.00 0.00 2.43
856 2593 5.437060 GGCCCTTCTACATACATCTCAAAA 58.563 41.667 0.00 0.00 0.00 2.44
857 2594 4.442893 CGGCCCTTCTACATACATCTCAAA 60.443 45.833 0.00 0.00 0.00 2.69
858 2595 3.069586 CGGCCCTTCTACATACATCTCAA 59.930 47.826 0.00 0.00 0.00 3.02
859 2596 2.628178 CGGCCCTTCTACATACATCTCA 59.372 50.000 0.00 0.00 0.00 3.27
860 2597 2.891580 TCGGCCCTTCTACATACATCTC 59.108 50.000 0.00 0.00 0.00 2.75
861 2598 2.894126 CTCGGCCCTTCTACATACATCT 59.106 50.000 0.00 0.00 0.00 2.90
862 2599 2.028930 CCTCGGCCCTTCTACATACATC 60.029 54.545 0.00 0.00 0.00 3.06
863 2600 1.971357 CCTCGGCCCTTCTACATACAT 59.029 52.381 0.00 0.00 0.00 2.29
864 2601 1.410004 CCTCGGCCCTTCTACATACA 58.590 55.000 0.00 0.00 0.00 2.29
865 2602 0.033642 GCCTCGGCCCTTCTACATAC 59.966 60.000 0.00 0.00 34.56 2.39
866 2603 2.437625 GCCTCGGCCCTTCTACATA 58.562 57.895 0.00 0.00 34.56 2.29
867 2604 3.231298 GCCTCGGCCCTTCTACAT 58.769 61.111 0.00 0.00 34.56 2.29
1136 2876 4.029809 GACCTTGGGGACGGGGTG 62.030 72.222 0.00 0.00 37.81 4.61
1696 3475 3.119065 CCAACATACATTTGCAGCATGGA 60.119 43.478 11.52 4.45 35.86 3.41
1958 4001 6.057533 ACATGAAAATGCGATTAGATCAGGA 58.942 36.000 0.00 0.00 0.00 3.86
1961 4004 6.017687 CAGGACATGAAAATGCGATTAGATCA 60.018 38.462 0.00 0.00 0.00 2.92
1962 4005 6.369005 CAGGACATGAAAATGCGATTAGATC 58.631 40.000 0.00 0.00 0.00 2.75
1963 4006 5.240183 CCAGGACATGAAAATGCGATTAGAT 59.760 40.000 0.00 0.00 0.00 1.98
1964 4007 4.576053 CCAGGACATGAAAATGCGATTAGA 59.424 41.667 0.00 0.00 0.00 2.10
2051 4244 4.039730 TGGAAAGAGGAGAAACTCACTCAG 59.960 45.833 14.53 0.00 39.97 3.35
2073 4266 4.491676 CCAACCTGCTCATTTTTCAGATG 58.508 43.478 0.00 0.00 0.00 2.90
2074 4267 3.512724 CCCAACCTGCTCATTTTTCAGAT 59.487 43.478 0.00 0.00 0.00 2.90
2081 4279 0.482446 TGACCCCAACCTGCTCATTT 59.518 50.000 0.00 0.00 0.00 2.32
2137 4336 7.973944 ACCTAAATTTATCGCCTCAAACATTTC 59.026 33.333 0.00 0.00 0.00 2.17
2206 4414 6.628844 GCAAGAGCATAACCTGAAAAATGGAT 60.629 38.462 0.00 0.00 41.58 3.41
2215 4425 3.084039 CCAAAGCAAGAGCATAACCTGA 58.916 45.455 0.00 0.00 45.49 3.86
2226 4436 1.881973 GCTGTCATGTCCAAAGCAAGA 59.118 47.619 0.00 0.00 34.01 3.02
2344 4562 3.517296 TTCAACTGCCACCAGGAAATA 57.483 42.857 0.00 0.00 43.53 1.40
2394 4612 5.675970 TGCTGAATTTCTTTCGTAAGTTCG 58.324 37.500 1.51 0.00 37.13 3.95
2422 4651 3.315191 AGACAACAGCGTGCAACTTTATT 59.685 39.130 0.00 0.00 31.75 1.40
2423 4652 2.878406 AGACAACAGCGTGCAACTTTAT 59.122 40.909 0.00 0.00 31.75 1.40
2424 4653 2.285083 AGACAACAGCGTGCAACTTTA 58.715 42.857 0.00 0.00 31.75 1.85
2425 4654 1.094785 AGACAACAGCGTGCAACTTT 58.905 45.000 0.00 0.00 31.75 2.66
2427 4656 1.867233 CTAAGACAACAGCGTGCAACT 59.133 47.619 0.00 0.00 31.75 3.16
2450 4687 6.713903 TGAGCTGATCAGTCAAAAGAAGAAAT 59.286 34.615 23.38 0.00 33.05 2.17
2472 4709 4.044426 GGTTTTACTTGCACAAAGCTGAG 58.956 43.478 0.00 0.00 45.94 3.35
2479 4716 3.876274 TTGCTGGTTTTACTTGCACAA 57.124 38.095 0.00 0.00 33.13 3.33
2501 4754 5.376625 TCTGAGACTACAATGCCAAGTTTT 58.623 37.500 0.00 0.00 0.00 2.43
2576 4837 5.591643 AGATGTAACACAAACAACTAGCG 57.408 39.130 0.00 0.00 29.27 4.26
2675 4938 5.478679 TGGGTTAATTACAAGGTCATGTTGG 59.521 40.000 0.00 0.00 34.75 3.77
2692 4955 1.822425 TGAAGGGGACTGTGGGTTAA 58.178 50.000 0.00 0.00 42.68 2.01
2713 4976 7.045725 TCTTTCTTTCGTTACTCTTTATGCG 57.954 36.000 0.00 0.00 0.00 4.73
2717 4980 8.199449 TGTCCTTCTTTCTTTCGTTACTCTTTA 58.801 33.333 0.00 0.00 0.00 1.85
2724 4987 6.988622 TGTTTGTCCTTCTTTCTTTCGTTA 57.011 33.333 0.00 0.00 0.00 3.18
2725 4988 5.890424 TGTTTGTCCTTCTTTCTTTCGTT 57.110 34.783 0.00 0.00 0.00 3.85
2810 5073 4.284490 ACCTGCAGACTAAGAGTTCATTGA 59.716 41.667 17.39 0.00 0.00 2.57
3013 5285 6.072119 CCGTTTTTAAGCTCCCTTAGTTTCAT 60.072 38.462 0.00 0.00 35.13 2.57
3030 5302 6.459024 CCACAGTTGATCTCAAACCGTTTTTA 60.459 38.462 0.00 0.00 37.63 1.52
3095 5367 6.786207 ACTTCTTCTGTTTCTTACAAACTGC 58.214 36.000 0.00 0.00 36.02 4.40
3118 5390 2.622436 CAGGAAGTAGGCTAGTGCAAC 58.378 52.381 9.58 0.00 41.91 4.17
3132 5404 1.610522 CACAGGAAAAGTGGCAGGAAG 59.389 52.381 0.00 0.00 33.43 3.46
3133 5405 1.214175 TCACAGGAAAAGTGGCAGGAA 59.786 47.619 0.00 0.00 37.58 3.36
3134 5406 0.843309 TCACAGGAAAAGTGGCAGGA 59.157 50.000 0.00 0.00 37.58 3.86
3135 5407 1.815003 GATCACAGGAAAAGTGGCAGG 59.185 52.381 0.00 0.00 37.58 4.85
3136 5408 2.227388 GTGATCACAGGAAAAGTGGCAG 59.773 50.000 21.07 0.00 37.58 4.85
3137 5409 2.158623 AGTGATCACAGGAAAAGTGGCA 60.159 45.455 27.02 0.00 37.58 4.92
3138 5410 2.485814 GAGTGATCACAGGAAAAGTGGC 59.514 50.000 27.02 0.00 37.58 5.01
3139 5411 3.077359 GGAGTGATCACAGGAAAAGTGG 58.923 50.000 27.02 0.00 37.58 4.00
3140 5412 3.743521 TGGAGTGATCACAGGAAAAGTG 58.256 45.455 27.02 0.00 38.32 3.16
3141 5413 4.437682 TTGGAGTGATCACAGGAAAAGT 57.562 40.909 27.02 4.07 0.00 2.66
3142 5414 4.022849 GGTTTGGAGTGATCACAGGAAAAG 60.023 45.833 27.02 0.00 0.00 2.27
3143 5415 3.888930 GGTTTGGAGTGATCACAGGAAAA 59.111 43.478 27.02 17.36 0.00 2.29
3148 5420 2.455674 TCGGTTTGGAGTGATCACAG 57.544 50.000 27.02 8.11 0.00 3.66
3153 5425 4.582656 TGTTCAAAATCGGTTTGGAGTGAT 59.417 37.500 0.00 0.00 45.73 3.06
3167 5439 6.715347 AGGCTTTCACTTAGTGTTCAAAAT 57.285 33.333 12.41 0.00 34.79 1.82
3179 5451 5.184892 ACATCTTCCATAGGCTTTCACTT 57.815 39.130 0.00 0.00 0.00 3.16
3190 5465 8.762645 AGAAACAAGATCAGTACATCTTCCATA 58.237 33.333 5.66 0.00 40.52 2.74
3255 5530 8.456471 AGCCCTTTTCGTGTTATTTACTTATTC 58.544 33.333 0.00 0.00 0.00 1.75
3263 5540 6.884836 AGATTCTAGCCCTTTTCGTGTTATTT 59.115 34.615 0.00 0.00 0.00 1.40
3267 5544 4.287766 AGATTCTAGCCCTTTTCGTGTT 57.712 40.909 0.00 0.00 0.00 3.32
3271 5548 4.455877 ACAACAAGATTCTAGCCCTTTTCG 59.544 41.667 0.00 0.00 0.00 3.46
3287 5564 3.616821 TCGTCTGAAGTCACAACAACAAG 59.383 43.478 0.00 0.00 0.00 3.16
3288 5565 3.369756 GTCGTCTGAAGTCACAACAACAA 59.630 43.478 0.00 0.00 0.00 2.83
3289 5566 2.927477 GTCGTCTGAAGTCACAACAACA 59.073 45.455 0.00 0.00 0.00 3.33
3290 5567 2.927477 TGTCGTCTGAAGTCACAACAAC 59.073 45.455 0.00 0.00 0.00 3.32
3303 5580 4.342862 AATGGAATCCCTATGTCGTCTG 57.657 45.455 0.00 0.00 0.00 3.51
3305 5582 8.258007 TCATAATAATGGAATCCCTATGTCGTC 58.742 37.037 0.00 0.00 33.61 4.20
3307 5584 8.040727 TGTCATAATAATGGAATCCCTATGTCG 58.959 37.037 0.00 0.00 33.61 4.35
3371 5649 6.865834 TTGGGACCTATTAAATGCACAAAT 57.134 33.333 0.00 0.00 0.00 2.32
3375 5653 6.872920 TGATTTTGGGACCTATTAAATGCAC 58.127 36.000 0.00 0.00 0.00 4.57
3376 5654 6.406849 GCTGATTTTGGGACCTATTAAATGCA 60.407 38.462 0.00 0.00 0.00 3.96
3390 5668 2.806945 TAGGGACAGCTGATTTTGGG 57.193 50.000 23.35 0.00 0.00 4.12
3414 5692 6.041409 CCTTTAGCCAGAGTTCTAGATCATCA 59.959 42.308 3.70 0.00 0.00 3.07
3504 5785 4.671831 TGGTTGCCCAATTCTCATTAAGA 58.328 39.130 0.00 0.00 37.98 2.10
3510 5791 4.608269 TGAATATGGTTGCCCAATTCTCA 58.392 39.130 13.00 2.69 46.04 3.27
3530 5811 2.496070 CCTAAGTTCATCGTCCACCTGA 59.504 50.000 0.00 0.00 0.00 3.86
3623 5904 2.787473 TCACATCACCCTCCATCAAC 57.213 50.000 0.00 0.00 0.00 3.18
3739 6031 0.910088 GGCCTACACCCTCAGGAGTT 60.910 60.000 0.00 0.00 38.09 3.01
3799 6094 0.173481 CAAACTCGGCCTCGATGAGA 59.827 55.000 11.11 0.00 45.04 3.27
3897 6193 6.241882 AGGGAGTAATAAAGGAGAAAGCTC 57.758 41.667 0.00 0.00 40.54 4.09
3914 6210 1.961133 TATTTGGGAACGGAGGGAGT 58.039 50.000 0.00 0.00 0.00 3.85
3915 6211 4.102681 ACTTATATTTGGGAACGGAGGGAG 59.897 45.833 0.00 0.00 0.00 4.30
3916 6212 4.042174 ACTTATATTTGGGAACGGAGGGA 58.958 43.478 0.00 0.00 0.00 4.20
3917 6213 4.102681 AGACTTATATTTGGGAACGGAGGG 59.897 45.833 0.00 0.00 0.00 4.30
3918 6214 5.291905 AGACTTATATTTGGGAACGGAGG 57.708 43.478 0.00 0.00 0.00 4.30
3921 6217 9.169592 TCTAAAAAGACTTATATTTGGGAACGG 57.830 33.333 0.00 0.00 0.00 4.44
3934 6230 9.284968 CCTTGTTGGAATCTCTAAAAAGACTTA 57.715 33.333 4.69 0.00 35.06 2.24
3935 6231 7.231519 CCCTTGTTGGAATCTCTAAAAAGACTT 59.768 37.037 4.69 0.00 35.06 3.01
3936 6232 6.717084 CCCTTGTTGGAATCTCTAAAAAGACT 59.283 38.462 4.69 0.00 35.06 3.24
3937 6233 6.715264 TCCCTTGTTGGAATCTCTAAAAAGAC 59.285 38.462 4.69 0.00 35.06 3.01
3938 6234 6.715264 GTCCCTTGTTGGAATCTCTAAAAAGA 59.285 38.462 4.69 0.00 35.06 2.52
3939 6235 6.717084 AGTCCCTTGTTGGAATCTCTAAAAAG 59.283 38.462 0.00 0.00 33.49 2.27
3940 6236 6.610830 AGTCCCTTGTTGGAATCTCTAAAAA 58.389 36.000 0.00 0.00 35.80 1.94
3941 6237 6.200878 AGTCCCTTGTTGGAATCTCTAAAA 57.799 37.500 0.00 0.00 35.80 1.52
3942 6238 5.843019 AGTCCCTTGTTGGAATCTCTAAA 57.157 39.130 0.00 0.00 35.80 1.85
3943 6239 5.783360 TGTAGTCCCTTGTTGGAATCTCTAA 59.217 40.000 0.00 0.00 35.80 2.10
3944 6240 5.338632 TGTAGTCCCTTGTTGGAATCTCTA 58.661 41.667 0.00 0.00 35.80 2.43
3945 6241 4.168101 TGTAGTCCCTTGTTGGAATCTCT 58.832 43.478 0.00 0.00 35.80 3.10
3946 6242 4.553330 TGTAGTCCCTTGTTGGAATCTC 57.447 45.455 0.00 0.00 35.80 2.75
3947 6243 5.395324 CGTATGTAGTCCCTTGTTGGAATCT 60.395 44.000 0.00 0.00 35.80 2.40
3948 6244 4.809426 CGTATGTAGTCCCTTGTTGGAATC 59.191 45.833 0.00 0.00 35.80 2.52
3949 6245 4.383770 CCGTATGTAGTCCCTTGTTGGAAT 60.384 45.833 0.00 0.00 35.80 3.01
3950 6246 3.055675 CCGTATGTAGTCCCTTGTTGGAA 60.056 47.826 0.00 0.00 35.80 3.53
3951 6247 2.498481 CCGTATGTAGTCCCTTGTTGGA 59.502 50.000 0.00 0.00 38.35 3.53
3952 6248 2.498481 TCCGTATGTAGTCCCTTGTTGG 59.502 50.000 0.00 0.00 0.00 3.77
3953 6249 3.782046 CTCCGTATGTAGTCCCTTGTTG 58.218 50.000 0.00 0.00 0.00 3.33
3954 6250 2.167900 GCTCCGTATGTAGTCCCTTGTT 59.832 50.000 0.00 0.00 0.00 2.83
3955 6251 1.755380 GCTCCGTATGTAGTCCCTTGT 59.245 52.381 0.00 0.00 0.00 3.16
3956 6252 1.754803 TGCTCCGTATGTAGTCCCTTG 59.245 52.381 0.00 0.00 0.00 3.61
3957 6253 2.154567 TGCTCCGTATGTAGTCCCTT 57.845 50.000 0.00 0.00 0.00 3.95
3958 6254 2.154567 TTGCTCCGTATGTAGTCCCT 57.845 50.000 0.00 0.00 0.00 4.20
3959 6255 2.973694 TTTGCTCCGTATGTAGTCCC 57.026 50.000 0.00 0.00 0.00 4.46
3960 6256 4.439057 TCATTTTGCTCCGTATGTAGTCC 58.561 43.478 0.00 0.00 0.00 3.85
3961 6257 6.257849 TCATTCATTTTGCTCCGTATGTAGTC 59.742 38.462 0.00 0.00 0.00 2.59
3962 6258 6.112734 TCATTCATTTTGCTCCGTATGTAGT 58.887 36.000 0.00 0.00 0.00 2.73
3963 6259 6.603237 TCATTCATTTTGCTCCGTATGTAG 57.397 37.500 0.00 0.00 0.00 2.74
3964 6260 6.993786 TTCATTCATTTTGCTCCGTATGTA 57.006 33.333 0.00 0.00 0.00 2.29
3965 6261 5.895636 TTCATTCATTTTGCTCCGTATGT 57.104 34.783 0.00 0.00 0.00 2.29
3966 6262 6.732154 AGATTCATTCATTTTGCTCCGTATG 58.268 36.000 0.00 0.00 0.00 2.39
3967 6263 6.949352 AGATTCATTCATTTTGCTCCGTAT 57.051 33.333 0.00 0.00 0.00 3.06
3968 6264 6.821160 TGTAGATTCATTCATTTTGCTCCGTA 59.179 34.615 0.00 0.00 0.00 4.02
3969 6265 5.647658 TGTAGATTCATTCATTTTGCTCCGT 59.352 36.000 0.00 0.00 0.00 4.69
3970 6266 5.967674 GTGTAGATTCATTCATTTTGCTCCG 59.032 40.000 0.00 0.00 0.00 4.63
3971 6267 7.066766 AGAGTGTAGATTCATTCATTTTGCTCC 59.933 37.037 0.00 0.00 0.00 4.70
3972 6268 7.983307 AGAGTGTAGATTCATTCATTTTGCTC 58.017 34.615 0.00 0.00 0.00 4.26
3973 6269 7.934855 AGAGTGTAGATTCATTCATTTTGCT 57.065 32.000 0.00 0.00 0.00 3.91
4014 6310 8.657074 TTCAAATGGACTACAATATACGGAAG 57.343 34.615 0.00 0.00 0.00 3.46
4015 6311 9.621629 ATTTCAAATGGACTACAATATACGGAA 57.378 29.630 0.00 0.00 0.00 4.30
4016 6312 9.268268 GATTTCAAATGGACTACAATATACGGA 57.732 33.333 0.00 0.00 0.00 4.69
4017 6313 9.273016 AGATTTCAAATGGACTACAATATACGG 57.727 33.333 0.00 0.00 0.00 4.02
4022 6318 9.958180 TTCAGAGATTTCAAATGGACTACAATA 57.042 29.630 0.00 0.00 0.00 1.90
4023 6319 8.868522 TTCAGAGATTTCAAATGGACTACAAT 57.131 30.769 0.00 0.00 0.00 2.71
4024 6320 8.690203 TTTCAGAGATTTCAAATGGACTACAA 57.310 30.769 0.00 0.00 0.00 2.41
4025 6321 8.690203 TTTTCAGAGATTTCAAATGGACTACA 57.310 30.769 0.00 0.00 0.00 2.74
4026 6322 9.003658 TCTTTTCAGAGATTTCAAATGGACTAC 57.996 33.333 0.00 0.00 0.00 2.73
4027 6323 9.003658 GTCTTTTCAGAGATTTCAAATGGACTA 57.996 33.333 0.00 0.00 0.00 2.59
4028 6324 7.723172 AGTCTTTTCAGAGATTTCAAATGGACT 59.277 33.333 0.00 0.00 0.00 3.85
4029 6325 7.880105 AGTCTTTTCAGAGATTTCAAATGGAC 58.120 34.615 0.00 0.00 0.00 4.02
4030 6326 8.469309 AAGTCTTTTCAGAGATTTCAAATGGA 57.531 30.769 0.00 0.00 0.00 3.41
4052 6348 9.294614 CCTCCGTTCCTAAATAGTAGTATAAGT 57.705 37.037 0.00 0.00 0.00 2.24
4053 6349 8.738106 CCCTCCGTTCCTAAATAGTAGTATAAG 58.262 40.741 0.00 0.00 0.00 1.73
4054 6350 8.448008 TCCCTCCGTTCCTAAATAGTAGTATAA 58.552 37.037 0.00 0.00 0.00 0.98
4055 6351 7.988937 TCCCTCCGTTCCTAAATAGTAGTATA 58.011 38.462 0.00 0.00 0.00 1.47
4056 6352 6.856757 TCCCTCCGTTCCTAAATAGTAGTAT 58.143 40.000 0.00 0.00 0.00 2.12
4057 6353 6.126361 ACTCCCTCCGTTCCTAAATAGTAGTA 60.126 42.308 0.00 0.00 0.00 1.82
4058 6354 5.134725 TCCCTCCGTTCCTAAATAGTAGT 57.865 43.478 0.00 0.00 0.00 2.73
4059 6355 5.139001 ACTCCCTCCGTTCCTAAATAGTAG 58.861 45.833 0.00 0.00 0.00 2.57
4060 6356 5.134725 ACTCCCTCCGTTCCTAAATAGTA 57.865 43.478 0.00 0.00 0.00 1.82
4061 6357 3.991683 ACTCCCTCCGTTCCTAAATAGT 58.008 45.455 0.00 0.00 0.00 2.12
4062 6358 5.139001 AGTACTCCCTCCGTTCCTAAATAG 58.861 45.833 0.00 0.00 0.00 1.73
4063 6359 5.134725 AGTACTCCCTCCGTTCCTAAATA 57.865 43.478 0.00 0.00 0.00 1.40
4064 6360 3.991683 AGTACTCCCTCCGTTCCTAAAT 58.008 45.455 0.00 0.00 0.00 1.40
4065 6361 3.463048 AGTACTCCCTCCGTTCCTAAA 57.537 47.619 0.00 0.00 0.00 1.85
4066 6362 3.094572 CAAGTACTCCCTCCGTTCCTAA 58.905 50.000 0.00 0.00 0.00 2.69
4067 6363 2.622452 CCAAGTACTCCCTCCGTTCCTA 60.622 54.545 0.00 0.00 0.00 2.94
4068 6364 1.558233 CAAGTACTCCCTCCGTTCCT 58.442 55.000 0.00 0.00 0.00 3.36
4069 6365 0.535797 CCAAGTACTCCCTCCGTTCC 59.464 60.000 0.00 0.00 0.00 3.62
4070 6366 0.108281 GCCAAGTACTCCCTCCGTTC 60.108 60.000 0.00 0.00 0.00 3.95
4071 6367 0.834687 TGCCAAGTACTCCCTCCGTT 60.835 55.000 0.00 0.00 0.00 4.44
4072 6368 1.229082 TGCCAAGTACTCCCTCCGT 60.229 57.895 0.00 0.00 0.00 4.69
4073 6369 1.218316 GTGCCAAGTACTCCCTCCG 59.782 63.158 0.00 0.00 0.00 4.63
4074 6370 0.250513 CAGTGCCAAGTACTCCCTCC 59.749 60.000 0.00 0.00 0.00 4.30
4075 6371 0.391793 GCAGTGCCAAGTACTCCCTC 60.392 60.000 2.85 0.00 0.00 4.30
4076 6372 1.127567 TGCAGTGCCAAGTACTCCCT 61.128 55.000 13.72 0.00 0.00 4.20
4077 6373 0.035056 ATGCAGTGCCAAGTACTCCC 60.035 55.000 13.72 0.00 0.00 4.30
4078 6374 1.089920 CATGCAGTGCCAAGTACTCC 58.910 55.000 13.72 0.00 0.00 3.85
4079 6375 1.089920 CCATGCAGTGCCAAGTACTC 58.910 55.000 13.72 0.00 0.00 2.59
4080 6376 0.692476 TCCATGCAGTGCCAAGTACT 59.308 50.000 13.72 0.00 0.00 2.73
4081 6377 0.804989 GTCCATGCAGTGCCAAGTAC 59.195 55.000 13.72 0.77 0.00 2.73
4082 6378 0.692476 AGTCCATGCAGTGCCAAGTA 59.308 50.000 13.72 0.00 0.00 2.24
4124 6420 9.717892 CAGATTGTTCATTGTTATTCTCTGATG 57.282 33.333 0.00 0.00 30.49 3.07
4169 6465 2.290260 ACAGGCAGATCAAATCCAACGA 60.290 45.455 0.00 0.00 0.00 3.85
4188 6484 1.149361 GCGGACAACACAAGTCGACA 61.149 55.000 19.50 0.00 36.87 4.35
4200 6496 2.354510 CTCTTGTTTCACTTGCGGACAA 59.645 45.455 0.00 0.00 0.00 3.18
4205 6501 0.040067 GGGCTCTTGTTTCACTTGCG 60.040 55.000 0.00 0.00 0.00 4.85
4223 6519 0.458543 CGGACAATCGTGAGGACTGG 60.459 60.000 0.00 0.00 0.00 4.00
4262 6558 7.200434 ACACATAATAGGAGACTCCACAATT 57.800 36.000 23.60 19.31 43.67 2.32
4266 6562 6.963083 AGTACACATAATAGGAGACTCCAC 57.037 41.667 23.60 8.53 43.67 4.02
4396 6692 3.508793 CACATGTTGCAGAAAAGAGGGAT 59.491 43.478 0.00 0.00 0.00 3.85
4406 6702 1.689984 TTTCAGCCACATGTTGCAGA 58.310 45.000 22.53 17.41 0.00 4.26
4427 6723 8.946085 ACGATTATTCAACATAAACTGATGTGT 58.054 29.630 0.00 0.00 39.99 3.72
4428 6724 9.425893 GACGATTATTCAACATAAACTGATGTG 57.574 33.333 0.00 0.00 39.99 3.21
4429 6725 8.328146 CGACGATTATTCAACATAAACTGATGT 58.672 33.333 0.00 0.00 41.92 3.06
4430 6726 8.328146 ACGACGATTATTCAACATAAACTGATG 58.672 33.333 0.00 0.00 0.00 3.07
4431 6727 8.420374 ACGACGATTATTCAACATAAACTGAT 57.580 30.769 0.00 0.00 0.00 2.90
4460 6757 0.541863 AGTTTCATCGTAGCTGGGGG 59.458 55.000 0.00 0.00 0.00 5.40
4473 6780 3.452990 TCTTCACCAGTGGTACAGTTTCA 59.547 43.478 16.22 0.00 40.27 2.69
4481 6788 4.080807 TCACAACTTTCTTCACCAGTGGTA 60.081 41.667 16.22 0.00 32.11 3.25
4483 6790 3.278574 TCACAACTTTCTTCACCAGTGG 58.721 45.455 7.91 7.91 0.00 4.00
4540 6848 0.669318 ACATGAGCCGTGGTTGTACG 60.669 55.000 0.00 0.00 43.35 3.67
4544 6852 1.670811 GGATAACATGAGCCGTGGTTG 59.329 52.381 0.00 0.00 0.00 3.77
4550 6858 0.930310 CACGTGGATAACATGAGCCG 59.070 55.000 7.95 0.00 39.46 5.52
4572 6880 4.498009 CCTGTTCGTTCAAGCACTGAAAAT 60.498 41.667 3.08 0.00 45.67 1.82
4573 6881 3.181501 CCTGTTCGTTCAAGCACTGAAAA 60.182 43.478 3.08 0.00 45.67 2.29
4583 6891 3.013921 ACTTCAAAGCCTGTTCGTTCAA 58.986 40.909 0.00 0.00 0.00 2.69
4589 6897 4.893424 TGTACAACTTCAAAGCCTGTTC 57.107 40.909 0.00 1.29 30.68 3.18
4606 6915 6.588756 TGCTACTACTTGTATGCAACTTGTAC 59.411 38.462 0.00 0.00 34.68 2.90
4627 6936 5.814188 CAGTCATTTTGATGTAGCTCTGCTA 59.186 40.000 0.00 0.00 40.44 3.49
4628 6937 4.634883 CAGTCATTTTGATGTAGCTCTGCT 59.365 41.667 0.00 0.00 43.41 4.24
4629 6938 4.201891 CCAGTCATTTTGATGTAGCTCTGC 60.202 45.833 0.00 0.00 0.00 4.26
4630 6939 4.334759 CCCAGTCATTTTGATGTAGCTCTG 59.665 45.833 0.00 0.00 0.00 3.35
4631 6940 4.521146 CCCAGTCATTTTGATGTAGCTCT 58.479 43.478 0.00 0.00 0.00 4.09
4632 6941 3.065925 GCCCAGTCATTTTGATGTAGCTC 59.934 47.826 0.00 0.00 0.00 4.09
4633 6942 3.019564 GCCCAGTCATTTTGATGTAGCT 58.980 45.455 0.00 0.00 0.00 3.32
4634 6943 2.223340 CGCCCAGTCATTTTGATGTAGC 60.223 50.000 0.00 0.00 0.00 3.58
4635 6944 2.355756 CCGCCCAGTCATTTTGATGTAG 59.644 50.000 0.00 0.00 0.00 2.74
4636 6945 2.364632 CCGCCCAGTCATTTTGATGTA 58.635 47.619 0.00 0.00 0.00 2.29
4637 6946 1.176527 CCGCCCAGTCATTTTGATGT 58.823 50.000 0.00 0.00 0.00 3.06
4638 6947 0.457035 CCCGCCCAGTCATTTTGATG 59.543 55.000 0.00 0.00 0.00 3.07
4639 6948 1.322538 GCCCGCCCAGTCATTTTGAT 61.323 55.000 0.00 0.00 0.00 2.57
4640 6949 1.976474 GCCCGCCCAGTCATTTTGA 60.976 57.895 0.00 0.00 0.00 2.69
4641 6950 2.573340 GCCCGCCCAGTCATTTTG 59.427 61.111 0.00 0.00 0.00 2.44
4642 6951 2.679996 GGCCCGCCCAGTCATTTT 60.680 61.111 0.00 0.00 0.00 1.82
4643 6952 3.978193 TGGCCCGCCCAGTCATTT 61.978 61.111 0.00 0.00 39.18 2.32
4652 6961 4.722700 TCTTCAAGCTGGCCCGCC 62.723 66.667 16.38 0.00 0.00 6.13
4653 6962 2.205243 CTTTCTTCAAGCTGGCCCGC 62.205 60.000 11.82 11.82 0.00 6.13
4654 6963 1.878775 CTTTCTTCAAGCTGGCCCG 59.121 57.895 0.00 0.00 0.00 6.13
4662 6971 3.436700 AAACGTTGGGCTTTCTTCAAG 57.563 42.857 0.00 0.00 35.29 3.02
4663 6972 3.878160 AAAACGTTGGGCTTTCTTCAA 57.122 38.095 0.00 0.00 0.00 2.69
4664 6973 3.878160 AAAAACGTTGGGCTTTCTTCA 57.122 38.095 0.00 0.00 0.00 3.02
4681 6990 0.406361 ATGGGCCGTGGAGGTAAAAA 59.594 50.000 0.00 0.00 43.70 1.94
4682 6991 0.406361 AATGGGCCGTGGAGGTAAAA 59.594 50.000 0.00 0.00 43.70 1.52
4683 6992 0.406361 AAATGGGCCGTGGAGGTAAA 59.594 50.000 0.00 0.00 43.70 2.01
4684 6993 0.034863 GAAATGGGCCGTGGAGGTAA 60.035 55.000 0.00 0.00 43.70 2.85
4685 6994 0.912487 AGAAATGGGCCGTGGAGGTA 60.912 55.000 0.00 0.00 43.70 3.08
4686 6995 2.231380 AGAAATGGGCCGTGGAGGT 61.231 57.895 0.00 0.00 43.70 3.85
4687 6996 1.750399 CAGAAATGGGCCGTGGAGG 60.750 63.158 0.00 0.00 44.97 4.30
4688 6997 2.409870 GCAGAAATGGGCCGTGGAG 61.410 63.158 0.00 0.00 0.00 3.86
4689 6998 2.361104 GCAGAAATGGGCCGTGGA 60.361 61.111 0.00 0.00 0.00 4.02
4690 6999 3.451894 GGCAGAAATGGGCCGTGG 61.452 66.667 0.00 0.00 40.93 4.94
4706 7015 1.066215 GCAAACCAATGGGCCTTTAGG 60.066 52.381 4.53 11.43 37.90 2.69
4707 7016 1.622811 TGCAAACCAATGGGCCTTTAG 59.377 47.619 4.53 0.00 37.90 1.85
4708 7017 1.622811 CTGCAAACCAATGGGCCTTTA 59.377 47.619 4.53 0.00 37.90 1.85
4709 7018 0.397564 CTGCAAACCAATGGGCCTTT 59.602 50.000 4.53 0.76 37.90 3.11
4710 7019 2.060370 CTGCAAACCAATGGGCCTT 58.940 52.632 4.53 0.00 37.90 4.35
4711 7020 2.586293 GCTGCAAACCAATGGGCCT 61.586 57.895 4.53 0.00 37.90 5.19
4712 7021 2.046988 GCTGCAAACCAATGGGCC 60.047 61.111 3.55 0.00 37.90 5.80
4713 7022 0.534652 TTTGCTGCAAACCAATGGGC 60.535 50.000 22.84 0.00 37.90 5.36
4714 7023 1.603326 GTTTTGCTGCAAACCAATGGG 59.397 47.619 25.99 0.00 41.29 4.00
4715 7024 2.288458 CAGTTTTGCTGCAAACCAATGG 59.712 45.455 25.99 9.92 38.52 3.16
4716 7025 2.288458 CCAGTTTTGCTGCAAACCAATG 59.712 45.455 25.99 20.37 43.71 2.82
4717 7026 2.563702 CCAGTTTTGCTGCAAACCAAT 58.436 42.857 25.99 10.37 43.71 3.16
4718 7027 1.406614 CCCAGTTTTGCTGCAAACCAA 60.407 47.619 25.99 10.42 43.71 3.67
4719 7028 0.177604 CCCAGTTTTGCTGCAAACCA 59.822 50.000 25.99 11.15 43.71 3.67
4720 7029 1.159713 GCCCAGTTTTGCTGCAAACC 61.160 55.000 25.99 19.90 43.71 3.27
4721 7030 1.489881 CGCCCAGTTTTGCTGCAAAC 61.490 55.000 25.99 19.72 43.71 2.93
4722 7031 1.227205 CGCCCAGTTTTGCTGCAAA 60.227 52.632 22.84 22.84 43.71 3.68
4723 7032 2.416678 CGCCCAGTTTTGCTGCAA 59.583 55.556 11.69 11.69 43.71 4.08
4724 7033 3.604667 CCGCCCAGTTTTGCTGCA 61.605 61.111 0.00 0.00 43.71 4.41
4725 7034 4.362476 CCCGCCCAGTTTTGCTGC 62.362 66.667 0.00 0.00 43.71 5.25
4726 7035 4.362476 GCCCGCCCAGTTTTGCTG 62.362 66.667 0.00 0.00 44.63 4.41
4729 7038 3.989787 GTGGCCCGCCCAGTTTTG 61.990 66.667 0.00 0.00 46.54 2.44
4730 7039 4.531426 TGTGGCCCGCCCAGTTTT 62.531 61.111 0.00 0.00 46.54 2.43
4731 7040 4.974721 CTGTGGCCCGCCCAGTTT 62.975 66.667 0.00 0.00 46.54 2.66
4742 7051 2.029518 GCAAAACTGGGCTGTGGC 59.970 61.111 0.00 0.00 37.82 5.01
4743 7052 0.249573 CAAGCAAAACTGGGCTGTGG 60.250 55.000 0.00 0.00 40.93 4.17
4744 7053 0.877213 GCAAGCAAAACTGGGCTGTG 60.877 55.000 0.00 0.00 40.93 3.66
4745 7054 1.329171 TGCAAGCAAAACTGGGCTGT 61.329 50.000 0.00 0.00 40.93 4.40
4746 7055 0.877213 GTGCAAGCAAAACTGGGCTG 60.877 55.000 0.00 0.00 40.93 4.85
4747 7056 1.044790 AGTGCAAGCAAAACTGGGCT 61.045 50.000 0.00 0.00 43.46 5.19
4748 7057 0.673437 TAGTGCAAGCAAAACTGGGC 59.327 50.000 0.00 0.00 0.00 5.36
4749 7058 3.017265 CTTAGTGCAAGCAAAACTGGG 57.983 47.619 0.00 0.00 0.00 4.45
4770 7079 0.391661 ACTTGTATGCACTGGCGGAG 60.392 55.000 0.00 0.00 45.35 4.63
4771 7080 0.899019 TACTTGTATGCACTGGCGGA 59.101 50.000 0.00 0.00 45.35 5.54
4772 7081 1.006832 GTACTTGTATGCACTGGCGG 58.993 55.000 0.00 0.00 45.35 6.13
4773 7082 1.006832 GGTACTTGTATGCACTGGCG 58.993 55.000 0.00 0.00 45.35 5.69
4774 7083 2.280628 GAGGTACTTGTATGCACTGGC 58.719 52.381 0.00 0.00 41.55 4.85
4775 7084 3.610040 TGAGGTACTTGTATGCACTGG 57.390 47.619 0.00 0.00 41.55 4.00
4776 7085 5.643348 TGAAATGAGGTACTTGTATGCACTG 59.357 40.000 0.00 0.00 41.55 3.66
4777 7086 5.804639 TGAAATGAGGTACTTGTATGCACT 58.195 37.500 0.00 0.00 41.55 4.40
4778 7087 5.643777 ACTGAAATGAGGTACTTGTATGCAC 59.356 40.000 0.00 0.00 41.55 4.57
4779 7088 5.643348 CACTGAAATGAGGTACTTGTATGCA 59.357 40.000 0.00 0.00 41.55 3.96
4780 7089 5.447818 GCACTGAAATGAGGTACTTGTATGC 60.448 44.000 0.00 0.00 41.55 3.14
4781 7090 5.643348 TGCACTGAAATGAGGTACTTGTATG 59.357 40.000 0.00 0.00 41.55 2.39
4782 7091 5.804639 TGCACTGAAATGAGGTACTTGTAT 58.195 37.500 0.00 0.00 41.55 2.29
4783 7092 5.222079 TGCACTGAAATGAGGTACTTGTA 57.778 39.130 0.00 0.00 41.55 2.41
4784 7093 4.085357 TGCACTGAAATGAGGTACTTGT 57.915 40.909 0.00 0.00 41.55 3.16
4785 7094 4.696877 TCATGCACTGAAATGAGGTACTTG 59.303 41.667 0.00 0.00 41.55 3.16
4786 7095 4.910195 TCATGCACTGAAATGAGGTACTT 58.090 39.130 0.00 0.00 41.55 2.24
4787 7096 4.697352 GTTCATGCACTGAAATGAGGTACT 59.303 41.667 11.51 0.00 45.27 2.73
4788 7097 4.142600 GGTTCATGCACTGAAATGAGGTAC 60.143 45.833 11.51 0.00 45.27 3.34
4789 7098 4.009675 GGTTCATGCACTGAAATGAGGTA 58.990 43.478 11.51 0.00 45.27 3.08
4790 7099 2.821969 GGTTCATGCACTGAAATGAGGT 59.178 45.455 11.51 0.00 45.27 3.85
4791 7100 2.821378 TGGTTCATGCACTGAAATGAGG 59.179 45.455 11.51 0.00 45.27 3.86
4792 7101 4.232221 GTTGGTTCATGCACTGAAATGAG 58.768 43.478 11.51 0.00 45.27 2.90
4793 7102 3.635836 TGTTGGTTCATGCACTGAAATGA 59.364 39.130 11.51 0.00 45.27 2.57
4794 7103 3.979948 TGTTGGTTCATGCACTGAAATG 58.020 40.909 11.51 0.00 45.27 2.32
4795 7104 3.006110 CCTGTTGGTTCATGCACTGAAAT 59.994 43.478 11.51 0.00 45.27 2.17
4796 7105 2.361757 CCTGTTGGTTCATGCACTGAAA 59.638 45.455 11.51 0.00 45.27 2.69
4797 7106 1.955778 CCTGTTGGTTCATGCACTGAA 59.044 47.619 7.27 7.27 41.61 3.02
4798 7107 1.608055 CCTGTTGGTTCATGCACTGA 58.392 50.000 0.00 0.00 0.00 3.41
4799 7108 0.038892 GCCTGTTGGTTCATGCACTG 60.039 55.000 0.00 0.00 35.27 3.66
4800 7109 0.178981 AGCCTGTTGGTTCATGCACT 60.179 50.000 0.00 0.00 32.82 4.40
4801 7110 0.675633 AAGCCTGTTGGTTCATGCAC 59.324 50.000 0.00 0.00 32.82 4.57
4802 7111 1.068895 CAAAGCCTGTTGGTTCATGCA 59.931 47.619 0.00 0.00 32.32 3.96
4803 7112 1.340889 TCAAAGCCTGTTGGTTCATGC 59.659 47.619 0.00 0.00 32.32 4.06
4804 7113 3.068590 ACTTCAAAGCCTGTTGGTTCATG 59.931 43.478 0.00 0.00 32.32 3.07
4805 7114 3.299503 ACTTCAAAGCCTGTTGGTTCAT 58.700 40.909 0.00 0.00 32.32 2.57
4806 7115 2.733956 ACTTCAAAGCCTGTTGGTTCA 58.266 42.857 0.00 0.00 32.32 3.18
4807 7116 3.119137 ACAACTTCAAAGCCTGTTGGTTC 60.119 43.478 0.00 0.00 42.61 3.62
4808 7117 2.831526 ACAACTTCAAAGCCTGTTGGTT 59.168 40.909 0.00 0.00 42.61 3.67
4809 7118 2.456577 ACAACTTCAAAGCCTGTTGGT 58.543 42.857 0.00 0.00 42.61 3.67
4810 7119 3.380004 TGTACAACTTCAAAGCCTGTTGG 59.620 43.478 0.00 0.00 42.61 3.77
4811 7120 4.630894 TGTACAACTTCAAAGCCTGTTG 57.369 40.909 0.00 0.00 43.55 3.33
4812 7121 4.993905 GTTGTACAACTTCAAAGCCTGTT 58.006 39.130 27.69 0.00 38.25 3.16
4813 7122 4.632538 GTTGTACAACTTCAAAGCCTGT 57.367 40.909 27.69 4.20 38.25 4.00
4825 7134 2.928116 GGCCGTGAGATAGTTGTACAAC 59.072 50.000 27.72 27.72 41.45 3.32
4826 7135 2.416296 CGGCCGTGAGATAGTTGTACAA 60.416 50.000 19.50 3.59 0.00 2.41
4827 7136 1.133598 CGGCCGTGAGATAGTTGTACA 59.866 52.381 19.50 0.00 0.00 2.90
4828 7137 1.836383 CGGCCGTGAGATAGTTGTAC 58.164 55.000 19.50 0.00 0.00 2.90
4834 7143 0.598562 AGTATGCGGCCGTGAGATAG 59.401 55.000 28.70 0.00 0.00 2.08
4836 7145 1.364171 GAGTATGCGGCCGTGAGAT 59.636 57.895 28.70 15.73 0.00 2.75
4907 7216 5.885352 CACAGACCCCACACATAAATTATCA 59.115 40.000 0.00 0.00 0.00 2.15
4964 7273 1.067516 GAGAGAGCACAGGAGATCAGC 59.932 57.143 0.00 0.00 0.00 4.26
5000 7309 0.617935 TGGTGATCAAAGATGCCGGA 59.382 50.000 5.05 0.00 0.00 5.14
5007 7316 1.001974 CGAGGTGGTGGTGATCAAAGA 59.998 52.381 0.00 0.00 0.00 2.52
5264 7576 2.487762 CACAAGTCACGGCCATACATTT 59.512 45.455 2.24 0.00 0.00 2.32
5388 7700 2.206576 AGTCAAGGCCAGGAACAATC 57.793 50.000 5.01 0.00 0.00 2.67
5438 7750 3.899052 AACCTCCATGGAATGCAATTG 57.101 42.857 17.00 0.00 44.97 2.32


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.