Multiple sequence alignment - TraesCS4A01G365000

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G365000 chr4A 100.000 3513 0 0 1 3513 638223324 638219812 0.000000e+00 6488.0
1 TraesCS4A01G365000 chr4A 80.537 149 16 6 3333 3468 395039389 395039537 6.200000e-18 102.0
2 TraesCS4A01G365000 chr5D 87.381 2948 185 90 422 3279 533630152 533633002 0.000000e+00 3210.0
3 TraesCS4A01G365000 chr5D 88.577 499 40 12 422 904 533575569 533576066 1.090000e-164 590.0
4 TraesCS4A01G365000 chr5D 87.755 490 48 6 422 904 533629639 533630123 2.370000e-156 562.0
5 TraesCS4A01G365000 chr5D 92.636 258 13 4 1 253 500951248 500950992 1.990000e-97 366.0
6 TraesCS4A01G365000 chr5D 95.595 227 10 0 27 253 465016663 465016889 7.170000e-97 364.0
7 TraesCS4A01G365000 chr5D 92.771 249 18 0 4 252 484639101 484638853 9.270000e-96 361.0
8 TraesCS4A01G365000 chr5D 92.531 241 10 3 3281 3513 533633098 533633338 4.340000e-89 339.0
9 TraesCS4A01G365000 chr5D 81.882 425 33 20 1008 1427 533576128 533576513 5.660000e-83 318.0
10 TraesCS4A01G365000 chr5D 77.661 573 82 26 263 798 533589833 533590396 1.220000e-79 307.0
11 TraesCS4A01G365000 chr5D 93.878 49 2 1 1218 1266 533545489 533545536 4.860000e-09 73.1
12 TraesCS4A01G365000 chr5B 86.177 1823 125 69 1528 3279 673680521 673682287 0.000000e+00 1853.0
13 TraesCS4A01G365000 chr5B 81.616 990 103 36 257 1207 673669495 673670444 0.000000e+00 747.0
14 TraesCS4A01G365000 chr5B 88.707 611 40 16 872 1464 673679865 673680464 0.000000e+00 719.0
15 TraesCS4A01G365000 chr5B 77.973 1253 144 72 255 1464 673635561 673636724 0.000000e+00 664.0
16 TraesCS4A01G365000 chr5B 93.191 235 15 1 3278 3511 673682376 673682610 9.340000e-91 344.0
17 TraesCS4A01G365000 chr5B 76.773 564 85 29 267 793 673631678 673632232 1.240000e-69 274.0
18 TraesCS4A01G365000 chr5B 75.980 587 66 39 255 797 673624913 673625468 2.110000e-57 233.0
19 TraesCS4A01G365000 chr5B 90.511 137 12 1 1208 1344 673670682 673670817 2.790000e-41 180.0
20 TraesCS4A01G365000 chr6A 93.625 251 15 1 4 253 99059093 99059343 1.190000e-99 374.0
21 TraesCS4A01G365000 chr6A 92.400 250 16 1 2 251 457319824 457319578 1.550000e-93 353.0
22 TraesCS4A01G365000 chr6A 86.239 109 15 0 3281 3389 5117239 5117347 6.160000e-23 119.0
23 TraesCS4A01G365000 chr1D 93.227 251 14 3 4 252 466423640 466423889 1.990000e-97 366.0
24 TraesCS4A01G365000 chr7A 92.490 253 13 3 3 252 79550467 79550716 1.200000e-94 357.0
25 TraesCS4A01G365000 chr6D 91.860 258 16 3 1 254 464750333 464750077 4.310000e-94 355.0
26 TraesCS4A01G365000 chr1A 92.095 253 15 2 1 253 517754157 517753910 5.580000e-93 351.0
27 TraesCS4A01G365000 chr6B 79.675 246 33 13 3281 3510 392492375 392492131 1.010000e-35 161.0
28 TraesCS4A01G365000 chr2B 82.609 138 13 6 3129 3266 713677036 713676910 1.030000e-20 111.0
29 TraesCS4A01G365000 chr4D 76.735 245 25 14 3284 3511 215447011 215446782 1.330000e-19 108.0
30 TraesCS4A01G365000 chr7D 94.737 38 2 0 2438 2475 32644811 32644848 3.790000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G365000 chr4A 638219812 638223324 3512 True 6488.000000 6488 100.000000 1 3513 1 chr4A.!!$R1 3512
1 TraesCS4A01G365000 chr5D 533629639 533633338 3699 False 1370.333333 3210 89.222333 422 3513 3 chr5D.!!$F5 3091
2 TraesCS4A01G365000 chr5D 533575569 533576513 944 False 454.000000 590 85.229500 422 1427 2 chr5D.!!$F4 1005
3 TraesCS4A01G365000 chr5D 533589833 533590396 563 False 307.000000 307 77.661000 263 798 1 chr5D.!!$F3 535
4 TraesCS4A01G365000 chr5B 673679865 673682610 2745 False 972.000000 1853 89.358333 872 3511 3 chr5B.!!$F4 2639
5 TraesCS4A01G365000 chr5B 673631678 673636724 5046 False 469.000000 664 77.373000 255 1464 2 chr5B.!!$F2 1209
6 TraesCS4A01G365000 chr5B 673669495 673670817 1322 False 463.500000 747 86.063500 257 1344 2 chr5B.!!$F3 1087
7 TraesCS4A01G365000 chr5B 673624913 673625468 555 False 233.000000 233 75.980000 255 797 1 chr5B.!!$F1 542

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
116 117 0.036875 GCAAGTGGTAGAGCAACCCT 59.963 55.0 0.99 0.0 38.90 4.34 F
1160 5405 0.042188 CAATACCTACGCATGCACGC 60.042 55.0 19.57 0.0 36.19 5.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1761 6303 0.035439 AATTCGAAGGTGGCCACGAT 60.035 50.0 29.08 20.17 35.52 3.73 R
2529 7125 0.320247 GTCTGCTGTGACCTGTGAGG 60.320 60.0 0.00 0.00 42.49 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 4.735132 CTTCGGCTCGTTCCCGCA 62.735 66.667 6.34 0.00 45.19 5.69
19 20 4.302509 TTCGGCTCGTTCCCGCAA 62.303 61.111 6.34 1.15 45.19 4.85
69 70 4.057428 GAGGAGGAGCACGCGTGT 62.057 66.667 36.80 24.72 0.00 4.49
72 73 2.506438 GAGGAGCACGCGTGTACC 60.506 66.667 36.80 34.52 0.00 3.34
75 76 2.049433 GAGCACGCGTGTACCACT 60.049 61.111 36.80 25.78 31.34 4.00
77 78 3.110178 GCACGCGTGTACCACTCC 61.110 66.667 36.80 16.46 31.34 3.85
78 79 2.649034 CACGCGTGTACCACTCCT 59.351 61.111 30.50 0.00 31.34 3.69
79 80 1.443872 CACGCGTGTACCACTCCTC 60.444 63.158 30.50 0.00 31.34 3.71
80 81 1.602888 ACGCGTGTACCACTCCTCT 60.603 57.895 12.93 0.00 31.34 3.69
82 83 0.456312 CGCGTGTACCACTCCTCTTC 60.456 60.000 0.00 0.00 31.34 2.87
83 84 0.108756 GCGTGTACCACTCCTCTTCC 60.109 60.000 0.00 0.00 31.34 3.46
84 85 0.531200 CGTGTACCACTCCTCTTCCC 59.469 60.000 0.00 0.00 31.34 3.97
87 88 2.028020 GTGTACCACTCCTCTTCCCAAG 60.028 54.545 0.00 0.00 0.00 3.61
88 89 1.066071 GTACCACTCCTCTTCCCAAGC 60.066 57.143 0.00 0.00 0.00 4.01
89 90 0.474660 ACCACTCCTCTTCCCAAGCT 60.475 55.000 0.00 0.00 0.00 3.74
90 91 0.251634 CCACTCCTCTTCCCAAGCTC 59.748 60.000 0.00 0.00 0.00 4.09
91 92 0.251634 CACTCCTCTTCCCAAGCTCC 59.748 60.000 0.00 0.00 0.00 4.70
92 93 0.912006 ACTCCTCTTCCCAAGCTCCC 60.912 60.000 0.00 0.00 0.00 4.30
94 95 0.475632 TCCTCTTCCCAAGCTCCCAA 60.476 55.000 0.00 0.00 0.00 4.12
95 96 0.627986 CCTCTTCCCAAGCTCCCAAT 59.372 55.000 0.00 0.00 0.00 3.16
96 97 1.684248 CCTCTTCCCAAGCTCCCAATG 60.684 57.143 0.00 0.00 0.00 2.82
97 98 0.332632 TCTTCCCAAGCTCCCAATGG 59.667 55.000 0.00 0.00 0.00 3.16
98 99 1.305213 TTCCCAAGCTCCCAATGGC 60.305 57.895 0.00 0.00 32.71 4.40
99 100 2.037687 CCCAAGCTCCCAATGGCA 59.962 61.111 0.00 0.00 32.71 4.92
100 101 1.610086 CCCAAGCTCCCAATGGCAA 60.610 57.895 0.00 0.00 32.71 4.52
101 102 1.610554 CCCAAGCTCCCAATGGCAAG 61.611 60.000 0.00 0.00 32.71 4.01
102 103 0.901580 CCAAGCTCCCAATGGCAAGT 60.902 55.000 0.00 0.00 0.00 3.16
105 106 1.607467 GCTCCCAATGGCAAGTGGT 60.607 57.895 16.73 0.00 40.04 4.16
107 108 1.755179 CTCCCAATGGCAAGTGGTAG 58.245 55.000 16.73 8.79 40.04 3.18
108 109 1.281867 CTCCCAATGGCAAGTGGTAGA 59.718 52.381 16.73 8.80 40.04 2.59
109 110 1.281867 TCCCAATGGCAAGTGGTAGAG 59.718 52.381 16.73 4.61 40.04 2.43
110 111 1.098050 CCAATGGCAAGTGGTAGAGC 58.902 55.000 11.45 0.00 36.76 4.09
113 114 1.826385 ATGGCAAGTGGTAGAGCAAC 58.174 50.000 0.00 0.00 0.00 4.17
114 115 0.250727 TGGCAAGTGGTAGAGCAACC 60.251 55.000 0.00 0.00 40.19 3.77
115 116 0.960861 GGCAAGTGGTAGAGCAACCC 60.961 60.000 0.99 0.00 38.90 4.11
116 117 0.036875 GCAAGTGGTAGAGCAACCCT 59.963 55.000 0.99 0.00 38.90 4.34
117 118 1.545651 GCAAGTGGTAGAGCAACCCTT 60.546 52.381 0.99 2.04 38.90 3.95
118 119 2.290071 GCAAGTGGTAGAGCAACCCTTA 60.290 50.000 0.99 0.00 38.90 2.69
119 120 3.622455 GCAAGTGGTAGAGCAACCCTTAT 60.622 47.826 0.99 0.00 38.90 1.73
121 122 5.741011 CAAGTGGTAGAGCAACCCTTATAA 58.259 41.667 0.99 0.00 38.90 0.98
122 123 6.177610 CAAGTGGTAGAGCAACCCTTATAAA 58.822 40.000 0.99 0.00 38.90 1.40
137 138 5.919755 CCTTATAAAGGGGTCTCAACTCTC 58.080 45.833 0.00 0.00 45.27 3.20
138 139 5.163290 CCTTATAAAGGGGTCTCAACTCTCC 60.163 48.000 0.00 0.00 45.27 3.71
140 141 1.945580 AAGGGGTCTCAACTCTCCTC 58.054 55.000 0.00 0.00 0.00 3.71
141 142 0.787084 AGGGGTCTCAACTCTCCTCA 59.213 55.000 0.00 0.00 0.00 3.86
143 144 1.276705 GGGGTCTCAACTCTCCTCAAC 59.723 57.143 0.00 0.00 0.00 3.18
144 145 2.252714 GGGTCTCAACTCTCCTCAACT 58.747 52.381 0.00 0.00 0.00 3.16
147 148 4.083565 GGTCTCAACTCTCCTCAACTAGT 58.916 47.826 0.00 0.00 0.00 2.57
148 149 5.254901 GGTCTCAACTCTCCTCAACTAGTA 58.745 45.833 0.00 0.00 0.00 1.82
151 152 5.946972 TCTCAACTCTCCTCAACTAGTAAGG 59.053 44.000 15.20 15.20 0.00 2.69
152 153 5.642165 TCAACTCTCCTCAACTAGTAAGGT 58.358 41.667 18.90 2.86 0.00 3.50
153 154 5.477291 TCAACTCTCCTCAACTAGTAAGGTG 59.523 44.000 18.90 17.08 42.23 4.00
155 156 3.702045 CTCTCCTCAACTAGTAAGGTGGG 59.298 52.174 18.90 14.59 41.00 4.61
156 157 3.335786 TCTCCTCAACTAGTAAGGTGGGA 59.664 47.826 18.90 14.06 44.47 4.37
158 159 3.077088 TCCTCAACTAGTAAGGTGGGACT 59.923 47.826 18.90 0.00 44.47 3.85
159 160 4.293102 TCCTCAACTAGTAAGGTGGGACTA 59.707 45.833 18.90 1.43 44.47 2.59
160 161 5.021458 CCTCAACTAGTAAGGTGGGACTAA 58.979 45.833 13.71 0.00 44.47 2.24
161 162 5.482878 CCTCAACTAGTAAGGTGGGACTAAA 59.517 44.000 13.71 0.00 44.47 1.85
162 163 6.350629 TCAACTAGTAAGGTGGGACTAAAC 57.649 41.667 0.00 0.00 41.12 2.01
163 164 6.080009 TCAACTAGTAAGGTGGGACTAAACT 58.920 40.000 0.00 0.00 41.12 2.66
164 165 6.556116 TCAACTAGTAAGGTGGGACTAAACTT 59.444 38.462 0.00 0.00 41.12 2.66
165 166 6.602410 ACTAGTAAGGTGGGACTAAACTTC 57.398 41.667 0.00 0.00 0.00 3.01
166 167 4.532314 AGTAAGGTGGGACTAAACTTCG 57.468 45.455 0.00 0.00 0.00 3.79
167 168 2.180432 AAGGTGGGACTAAACTTCGC 57.820 50.000 0.00 0.00 0.00 4.70
168 169 1.053424 AGGTGGGACTAAACTTCGCA 58.947 50.000 0.00 0.00 33.84 5.10
170 171 1.154197 GTGGGACTAAACTTCGCACC 58.846 55.000 8.01 0.00 46.16 5.01
171 172 0.759959 TGGGACTAAACTTCGCACCA 59.240 50.000 0.00 0.00 31.47 4.17
172 173 1.154197 GGGACTAAACTTCGCACCAC 58.846 55.000 0.00 0.00 0.00 4.16
173 174 1.154197 GGACTAAACTTCGCACCACC 58.846 55.000 0.00 0.00 0.00 4.61
174 175 1.270678 GGACTAAACTTCGCACCACCT 60.271 52.381 0.00 0.00 0.00 4.00
175 176 1.798813 GACTAAACTTCGCACCACCTG 59.201 52.381 0.00 0.00 0.00 4.00
176 177 0.517316 CTAAACTTCGCACCACCTGC 59.483 55.000 0.00 0.00 43.21 4.85
177 178 0.887387 TAAACTTCGCACCACCTGCC 60.887 55.000 0.00 0.00 43.84 4.85
178 179 2.902423 AAACTTCGCACCACCTGCCA 62.902 55.000 0.00 0.00 43.84 4.92
179 180 2.360350 CTTCGCACCACCTGCCAT 60.360 61.111 0.00 0.00 43.84 4.40
180 181 2.359850 TTCGCACCACCTGCCATC 60.360 61.111 0.00 0.00 43.84 3.51
181 182 2.809861 CTTCGCACCACCTGCCATCT 62.810 60.000 0.00 0.00 43.84 2.90
182 183 2.803155 TTCGCACCACCTGCCATCTC 62.803 60.000 0.00 0.00 43.84 2.75
183 184 2.352422 GCACCACCTGCCATCTCA 59.648 61.111 0.00 0.00 40.42 3.27
184 185 1.077212 GCACCACCTGCCATCTCAT 60.077 57.895 0.00 0.00 40.42 2.90
185 186 0.181114 GCACCACCTGCCATCTCATA 59.819 55.000 0.00 0.00 40.42 2.15
186 187 1.959042 CACCACCTGCCATCTCATAC 58.041 55.000 0.00 0.00 0.00 2.39
187 188 1.210234 CACCACCTGCCATCTCATACA 59.790 52.381 0.00 0.00 0.00 2.29
188 189 2.130193 ACCACCTGCCATCTCATACAT 58.870 47.619 0.00 0.00 0.00 2.29
189 190 2.158711 ACCACCTGCCATCTCATACATG 60.159 50.000 0.00 0.00 0.00 3.21
190 191 2.501261 CACCTGCCATCTCATACATGG 58.499 52.381 0.00 0.00 43.47 3.66
191 192 1.422781 ACCTGCCATCTCATACATGGG 59.577 52.381 0.00 0.00 41.23 4.00
192 193 1.531423 CTGCCATCTCATACATGGGC 58.469 55.000 0.00 0.00 41.23 5.36
193 194 0.111061 TGCCATCTCATACATGGGCC 59.889 55.000 0.00 0.00 41.23 5.80
194 195 0.403271 GCCATCTCATACATGGGCCT 59.597 55.000 4.53 0.00 41.23 5.19
195 196 1.612726 GCCATCTCATACATGGGCCTC 60.613 57.143 4.53 0.00 41.23 4.70
196 197 1.701292 CCATCTCATACATGGGCCTCA 59.299 52.381 4.53 0.00 37.71 3.86
197 198 2.107031 CCATCTCATACATGGGCCTCAA 59.893 50.000 4.53 0.00 37.71 3.02
198 199 3.409570 CATCTCATACATGGGCCTCAAG 58.590 50.000 4.53 0.00 0.00 3.02
199 200 2.763039 TCTCATACATGGGCCTCAAGA 58.237 47.619 4.53 0.00 0.00 3.02
200 201 3.321039 TCTCATACATGGGCCTCAAGAT 58.679 45.455 4.53 0.00 0.00 2.40
201 202 3.718434 TCTCATACATGGGCCTCAAGATT 59.282 43.478 4.53 0.00 0.00 2.40
202 203 4.907269 TCTCATACATGGGCCTCAAGATTA 59.093 41.667 4.53 0.00 0.00 1.75
203 204 5.369404 TCTCATACATGGGCCTCAAGATTAA 59.631 40.000 4.53 0.00 0.00 1.40
204 205 6.044754 TCTCATACATGGGCCTCAAGATTAAT 59.955 38.462 4.53 0.00 0.00 1.40
206 207 4.524802 ACATGGGCCTCAAGATTAATCA 57.475 40.909 17.56 0.00 0.00 2.57
207 208 4.467769 ACATGGGCCTCAAGATTAATCAG 58.532 43.478 17.56 9.51 0.00 2.90
208 209 3.582998 TGGGCCTCAAGATTAATCAGG 57.417 47.619 17.56 15.32 0.00 3.86
209 210 2.175499 TGGGCCTCAAGATTAATCAGGG 59.825 50.000 17.56 13.06 0.00 4.45
210 211 2.443255 GGGCCTCAAGATTAATCAGGGA 59.557 50.000 17.56 10.12 0.00 4.20
211 212 3.075134 GGGCCTCAAGATTAATCAGGGAT 59.925 47.826 17.56 0.00 0.00 3.85
212 213 4.448347 GGGCCTCAAGATTAATCAGGGATT 60.448 45.833 17.56 0.00 36.20 3.01
213 214 5.222130 GGGCCTCAAGATTAATCAGGGATTA 60.222 44.000 17.56 0.00 33.95 1.75
214 215 5.942826 GGCCTCAAGATTAATCAGGGATTAG 59.057 44.000 17.56 5.01 36.15 1.73
215 216 6.466470 GGCCTCAAGATTAATCAGGGATTAGT 60.466 42.308 17.56 0.00 36.15 2.24
217 218 7.512992 CCTCAAGATTAATCAGGGATTAGTGT 58.487 38.462 17.56 0.00 36.15 3.55
218 219 7.659390 CCTCAAGATTAATCAGGGATTAGTGTC 59.341 40.741 17.56 1.34 36.15 3.67
241 242 8.431910 GTCTTATATAGACCTAAACCCATCCA 57.568 38.462 0.00 0.00 46.30 3.41
242 243 9.047947 GTCTTATATAGACCTAAACCCATCCAT 57.952 37.037 0.00 0.00 46.30 3.41
247 248 5.584551 AGACCTAAACCCATCCATAATCC 57.415 43.478 0.00 0.00 0.00 3.01
248 249 4.981647 AGACCTAAACCCATCCATAATCCA 59.018 41.667 0.00 0.00 0.00 3.41
250 251 5.454966 ACCTAAACCCATCCATAATCCAAC 58.545 41.667 0.00 0.00 0.00 3.77
251 252 5.043732 ACCTAAACCCATCCATAATCCAACA 60.044 40.000 0.00 0.00 0.00 3.33
252 253 5.896678 CCTAAACCCATCCATAATCCAACAA 59.103 40.000 0.00 0.00 0.00 2.83
278 3908 6.238593 GCACTCCTAAGCAAAAGATGAATAGG 60.239 42.308 0.00 0.00 38.92 2.57
286 3916 4.022503 GCAAAAGATGAATAGGATGCTCCC 60.023 45.833 0.00 0.00 37.19 4.30
287 3917 5.135383 CAAAAGATGAATAGGATGCTCCCA 58.865 41.667 0.00 0.00 37.19 4.37
300 3935 3.402628 TGCTCCCAGTGTACTTCTTTC 57.597 47.619 0.00 0.00 0.00 2.62
340 3987 6.120378 TCTTACATTTTGTACGCAACACAA 57.880 33.333 0.00 0.00 38.00 3.33
341 3988 5.966503 TCTTACATTTTGTACGCAACACAAC 59.033 36.000 0.00 0.00 38.00 3.32
356 4003 6.033341 GCAACACAACTTTGAATCAGTGTAA 58.967 36.000 5.79 0.00 39.07 2.41
358 4005 7.250569 CAACACAACTTTGAATCAGTGTAAGT 58.749 34.615 5.79 0.00 39.07 2.24
391 4038 4.215109 CCGGAAATTACCCATGAATCCTT 58.785 43.478 0.00 0.00 0.00 3.36
397 4044 1.686236 ACCCATGAATCCTTGAGGGT 58.314 50.000 0.00 0.00 44.40 4.34
415 4062 1.982395 TGTGAGTAGGAGGCACCGG 60.982 63.158 0.00 0.00 44.74 5.28
416 4063 1.681327 GTGAGTAGGAGGCACCGGA 60.681 63.158 9.46 0.00 44.74 5.14
417 4064 1.077805 TGAGTAGGAGGCACCGGAA 59.922 57.895 9.46 0.00 44.74 4.30
418 4065 0.543410 TGAGTAGGAGGCACCGGAAA 60.543 55.000 9.46 0.00 44.74 3.13
420 4067 1.209747 GAGTAGGAGGCACCGGAAATT 59.790 52.381 9.46 0.00 44.74 1.82
479 4147 6.166279 CAGGTTTCTAGTGCTACAATCAGAA 58.834 40.000 0.00 0.00 0.00 3.02
483 4151 7.148557 GGTTTCTAGTGCTACAATCAGAAAGTC 60.149 40.741 0.00 0.00 33.88 3.01
484 4152 6.590234 TCTAGTGCTACAATCAGAAAGTCA 57.410 37.500 0.00 0.00 0.00 3.41
544 4212 2.437359 ACCTGCATCTTCCAGCGC 60.437 61.111 0.00 0.00 0.00 5.92
563 4231 2.359850 GAGTGCCACAATGCCGGA 60.360 61.111 5.05 0.00 0.00 5.14
576 4244 1.285950 GCCGGAAAAAGCAGGACAC 59.714 57.895 5.05 0.00 0.00 3.67
581 4249 0.944386 GAAAAAGCAGGACACGCAGA 59.056 50.000 0.00 0.00 0.00 4.26
588 4256 1.013005 CAGGACACGCAGAAGCTCAG 61.013 60.000 0.00 0.00 39.10 3.35
624 4814 1.572085 CGCTGTGCAAGTCCCTGAAG 61.572 60.000 0.00 0.00 0.00 3.02
645 4835 0.889186 TTTGTTCCGAGGGAAGCAGC 60.889 55.000 0.00 0.00 42.88 5.25
681 4871 3.945921 TGGTCGTGTAGATCTCGATTTCT 59.054 43.478 0.00 3.15 42.49 2.52
683 4873 4.035324 GGTCGTGTAGATCTCGATTTCTGA 59.965 45.833 0.00 0.00 42.49 3.27
689 4879 5.750547 TGTAGATCTCGATTTCTGATGCAAC 59.249 40.000 0.00 0.00 0.00 4.17
701 4893 2.637715 GATGCAACAGACGCGATGCC 62.638 60.000 15.93 4.25 38.00 4.40
725 4922 4.658435 AGGGCTTTTTGTTCCTGGTAATTT 59.342 37.500 0.00 0.00 0.00 1.82
726 4923 4.994852 GGGCTTTTTGTTCCTGGTAATTTC 59.005 41.667 0.00 0.00 0.00 2.17
727 4924 4.684242 GGCTTTTTGTTCCTGGTAATTTCG 59.316 41.667 0.00 0.00 0.00 3.46
893 5103 2.600731 CACAAGTCACGCCAACAAAAA 58.399 42.857 0.00 0.00 0.00 1.94
933 5164 1.277557 ACTGCTTGACCAGAGATCACC 59.722 52.381 0.00 0.00 36.67 4.02
935 5166 0.615331 GCTTGACCAGAGATCACCCA 59.385 55.000 0.00 0.00 0.00 4.51
936 5167 1.677217 GCTTGACCAGAGATCACCCAC 60.677 57.143 0.00 0.00 0.00 4.61
941 5172 0.390340 CCAGAGATCACCCACACACG 60.390 60.000 0.00 0.00 0.00 4.49
975 5211 2.330393 CGCCGTACGTCGATCCAT 59.670 61.111 14.26 0.00 42.86 3.41
976 5212 1.724929 CGCCGTACGTCGATCCATC 60.725 63.158 14.26 0.00 42.86 3.51
1077 5322 3.376935 CTTCTCGTCCTGCCCGCAT 62.377 63.158 0.00 0.00 0.00 4.73
1140 5385 1.368493 CGTCCTCGCCGTACGTATG 60.368 63.158 15.21 7.87 44.19 2.39
1160 5405 0.042188 CAATACCTACGCATGCACGC 60.042 55.000 19.57 0.00 36.19 5.34
1162 5407 2.028125 ATACCTACGCATGCACGCCT 62.028 55.000 19.57 0.00 36.19 5.52
1166 5411 2.309764 CTACGCATGCACGCCTTTCC 62.310 60.000 19.57 0.00 36.19 3.13
1194 5439 1.667830 CTGCGCCTCTGTTTTCGGA 60.668 57.895 4.18 0.00 0.00 4.55
1471 5997 5.523916 GTCTCCGAGGTACAGTACGTAATTA 59.476 44.000 5.90 0.00 0.00 1.40
1472 5998 5.523916 TCTCCGAGGTACAGTACGTAATTAC 59.476 44.000 5.90 5.47 0.00 1.89
1518 6045 4.814294 GGTCGGGCGGTGCTACTG 62.814 72.222 0.00 0.00 0.00 2.74
1519 6046 4.814294 GTCGGGCGGTGCTACTGG 62.814 72.222 0.00 0.00 0.00 4.00
1524 6051 4.697756 GCGGTGCTACTGGTGCCA 62.698 66.667 0.00 0.00 0.00 4.92
1525 6052 2.268920 CGGTGCTACTGGTGCCAT 59.731 61.111 0.00 0.00 0.00 4.40
1526 6053 1.815421 CGGTGCTACTGGTGCCATC 60.815 63.158 0.00 0.00 0.00 3.51
1527 6054 1.452108 GGTGCTACTGGTGCCATCC 60.452 63.158 0.00 0.00 0.00 3.51
1547 6074 3.628942 TCCCTTTTCATGATGATCTTGCG 59.371 43.478 0.00 0.00 0.00 4.85
1576 6103 4.853924 TCACTTGGAATCTTTGCCTTTC 57.146 40.909 0.00 0.00 0.00 2.62
1604 6131 0.251033 TGCTGCTGCCTTTCTGTCAT 60.251 50.000 13.47 0.00 38.71 3.06
1606 6133 1.271656 GCTGCTGCCTTTCTGTCATTT 59.728 47.619 3.85 0.00 0.00 2.32
1610 6137 2.163211 GCTGCCTTTCTGTCATTTCTCC 59.837 50.000 0.00 0.00 0.00 3.71
1611 6138 3.683802 CTGCCTTTCTGTCATTTCTCCT 58.316 45.455 0.00 0.00 0.00 3.69
1612 6139 4.836825 CTGCCTTTCTGTCATTTCTCCTA 58.163 43.478 0.00 0.00 0.00 2.94
1613 6140 4.579869 TGCCTTTCTGTCATTTCTCCTAC 58.420 43.478 0.00 0.00 0.00 3.18
1614 6141 4.287067 TGCCTTTCTGTCATTTCTCCTACT 59.713 41.667 0.00 0.00 0.00 2.57
1616 6143 6.045955 GCCTTTCTGTCATTTCTCCTACTAG 58.954 44.000 0.00 0.00 0.00 2.57
1617 6144 6.351456 GCCTTTCTGTCATTTCTCCTACTAGT 60.351 42.308 0.00 0.00 0.00 2.57
1618 6145 7.616313 CCTTTCTGTCATTTCTCCTACTAGTT 58.384 38.462 0.00 0.00 0.00 2.24
1620 6147 9.495572 CTTTCTGTCATTTCTCCTACTAGTTTT 57.504 33.333 0.00 0.00 0.00 2.43
1666 6207 1.702491 GGTAGGTTGTTGCGATCGCC 61.702 60.000 35.12 21.99 41.09 5.54
1691 6233 2.464459 CGCACGGGAAGAGATTGGC 61.464 63.158 0.00 0.00 0.00 4.52
1700 6242 3.057245 GGGAAGAGATTGGCAGTTTGTTC 60.057 47.826 2.52 2.52 0.00 3.18
1701 6243 3.365364 GGAAGAGATTGGCAGTTTGTTCG 60.365 47.826 4.78 0.00 0.00 3.95
1702 6244 2.851195 AGAGATTGGCAGTTTGTTCGT 58.149 42.857 0.00 0.00 0.00 3.85
1703 6245 3.214328 AGAGATTGGCAGTTTGTTCGTT 58.786 40.909 0.00 0.00 0.00 3.85
1704 6246 3.251004 AGAGATTGGCAGTTTGTTCGTTC 59.749 43.478 0.00 0.00 0.00 3.95
1737 6279 4.616592 CGATCCGTCGTCCATGAG 57.383 61.111 0.00 0.00 42.78 2.90
1738 6280 1.008424 CGATCCGTCGTCCATGAGG 60.008 63.158 0.00 0.00 42.78 3.86
1739 6281 1.444917 CGATCCGTCGTCCATGAGGA 61.445 60.000 0.00 0.00 42.78 3.71
1748 6290 3.615597 TCCATGAGGATCCGTCAGT 57.384 52.632 15.97 0.00 39.61 3.41
1749 6291 1.866015 TCCATGAGGATCCGTCAGTT 58.134 50.000 15.97 0.00 39.61 3.16
1750 6292 3.026707 TCCATGAGGATCCGTCAGTTA 57.973 47.619 15.97 4.86 39.61 2.24
1751 6293 2.693591 TCCATGAGGATCCGTCAGTTAC 59.306 50.000 15.97 1.11 39.61 2.50
1752 6294 2.543861 CCATGAGGATCCGTCAGTTACG 60.544 54.545 15.97 0.00 44.38 3.18
1753 6295 5.045753 CCATGAGGATCCGTCAGTTACGT 62.046 52.174 15.97 0.00 43.67 3.57
1754 6296 6.792311 CCATGAGGATCCGTCAGTTACGTC 62.792 54.167 15.97 2.60 43.67 4.34
1821 6364 1.599518 AACTCCGGTTGAATGCGCA 60.600 52.632 14.96 14.96 33.96 6.09
1840 6383 9.919348 AATGCGCAATTCAATTTGATTAATTAC 57.081 25.926 17.11 0.00 34.69 1.89
1843 6386 9.919348 GCGCAATTCAATTTGATTAATTACAAT 57.081 25.926 0.30 0.00 34.69 2.71
1878 6434 3.565902 TCAAACGTGATGGTAATGTTGCA 59.434 39.130 0.00 0.00 0.00 4.08
1885 6441 3.128415 TGATGGTAATGTTGCATCAACGG 59.872 43.478 0.75 0.00 46.13 4.44
1886 6442 2.509569 TGGTAATGTTGCATCAACGGT 58.490 42.857 0.75 0.00 46.13 4.83
1887 6443 2.887783 TGGTAATGTTGCATCAACGGTT 59.112 40.909 0.75 5.61 46.13 4.44
1889 6445 4.519350 TGGTAATGTTGCATCAACGGTTAA 59.481 37.500 0.75 0.00 46.13 2.01
1890 6446 5.009710 TGGTAATGTTGCATCAACGGTTAAA 59.990 36.000 0.75 0.00 46.13 1.52
1891 6447 6.096695 GGTAATGTTGCATCAACGGTTAAAT 58.903 36.000 0.75 0.00 46.13 1.40
1892 6448 7.094334 TGGTAATGTTGCATCAACGGTTAAATA 60.094 33.333 0.75 0.00 46.13 1.40
1893 6449 7.755822 GGTAATGTTGCATCAACGGTTAAATAA 59.244 33.333 0.75 0.00 46.13 1.40
1894 6450 7.810766 AATGTTGCATCAACGGTTAAATAAG 57.189 32.000 0.75 0.00 46.13 1.73
1895 6451 6.320494 TGTTGCATCAACGGTTAAATAAGT 57.680 33.333 0.00 0.00 46.13 2.24
1896 6452 6.375377 TGTTGCATCAACGGTTAAATAAGTC 58.625 36.000 0.00 0.00 46.13 3.01
1897 6453 6.205853 TGTTGCATCAACGGTTAAATAAGTCT 59.794 34.615 0.00 0.00 46.13 3.24
1898 6454 6.811253 TGCATCAACGGTTAAATAAGTCTT 57.189 33.333 0.00 0.00 0.00 3.01
1907 6481 8.080083 ACGGTTAAATAAGTCTTTGTACTGTG 57.920 34.615 0.00 0.00 29.74 3.66
1940 6519 2.074353 CGTGGCGTGCATTTCGTTG 61.074 57.895 0.00 0.00 0.00 4.10
2321 6912 2.281692 TCTTCGACCCGTCCGACA 60.282 61.111 0.00 0.00 35.61 4.35
2529 7125 4.572909 TGGTGATATGATATGCTCACAGC 58.427 43.478 6.92 0.00 39.77 4.40
2531 7127 4.323333 GGTGATATGATATGCTCACAGCCT 60.323 45.833 6.92 0.00 41.51 4.58
2532 7128 4.869297 GTGATATGATATGCTCACAGCCTC 59.131 45.833 0.00 0.00 41.51 4.70
2533 7129 4.529377 TGATATGATATGCTCACAGCCTCA 59.471 41.667 0.00 0.00 41.51 3.86
2534 7130 2.609427 TGATATGCTCACAGCCTCAC 57.391 50.000 0.00 0.00 41.51 3.51
2535 7131 1.832998 TGATATGCTCACAGCCTCACA 59.167 47.619 0.00 0.00 41.51 3.58
2536 7132 2.159000 TGATATGCTCACAGCCTCACAG 60.159 50.000 0.00 0.00 41.51 3.66
2537 7133 0.538584 TATGCTCACAGCCTCACAGG 59.461 55.000 0.00 0.00 41.51 4.00
2623 7219 3.853712 GCAGACAGCAGACAGTCG 58.146 61.111 0.00 0.00 44.79 4.18
2639 7236 5.409826 AGACAGTCGGATTCTCATTTTGAAC 59.590 40.000 0.00 0.00 0.00 3.18
2666 7263 5.510674 CCTCACGTTTTACTACACGATACAG 59.489 44.000 0.00 0.00 39.76 2.74
2700 7297 6.826668 TCTTTATTCATATTTCTCCCGCTCA 58.173 36.000 0.00 0.00 0.00 4.26
2705 7302 3.450817 TCATATTTCTCCCGCTCACTGAA 59.549 43.478 0.00 0.00 0.00 3.02
2706 7303 2.859165 ATTTCTCCCGCTCACTGAAA 57.141 45.000 0.00 0.00 0.00 2.69
2707 7304 2.169832 TTTCTCCCGCTCACTGAAAG 57.830 50.000 0.00 0.00 42.29 2.62
2708 7305 0.321671 TTCTCCCGCTCACTGAAAGG 59.678 55.000 0.00 0.00 39.30 3.11
2709 7306 1.743252 CTCCCGCTCACTGAAAGGC 60.743 63.158 0.00 0.00 39.30 4.35
2710 7307 2.177594 CTCCCGCTCACTGAAAGGCT 62.178 60.000 0.00 0.00 39.30 4.58
2787 7384 6.920569 AATTTACCGTCTGTAATGGATGAC 57.079 37.500 0.00 0.00 39.14 3.06
2935 7532 4.622260 AAATAAAGCCACACAGCCAAAT 57.378 36.364 0.00 0.00 0.00 2.32
3003 7600 6.382869 AAATCAGACAGTCCTCACAAAAAG 57.617 37.500 0.00 0.00 0.00 2.27
3086 7686 3.074390 TGAAGAAACCATGGGATGTCACT 59.926 43.478 18.09 2.57 0.00 3.41
3095 7695 0.729116 GGGATGTCACTGCAATGTCG 59.271 55.000 0.00 0.00 0.00 4.35
3119 7719 1.529226 CCCACTTCAACACGGCAATA 58.471 50.000 0.00 0.00 0.00 1.90
3136 7736 3.033184 CAATAGGTACCCACGAACCCTA 58.967 50.000 8.74 0.00 36.34 3.53
3238 7845 0.106149 CATCGGGTAAGGCCTGTACC 59.894 60.000 24.80 24.80 44.16 3.34
3252 7859 0.325860 TGTACCGGTATGGGAAGGCT 60.326 55.000 19.19 0.00 44.64 4.58
3257 7864 2.158204 ACCGGTATGGGAAGGCTATACT 60.158 50.000 4.49 0.00 44.64 2.12
3279 7886 1.849977 TACCCGTGTACCTGCATACA 58.150 50.000 0.00 0.00 32.57 2.29
3318 8019 0.107017 CTCCCCTTACCCATGTGCAG 60.107 60.000 0.00 0.00 0.00 4.41
3334 8035 3.894427 TGTGCAGGGTCATGTTTAAATGT 59.106 39.130 0.00 0.00 0.00 2.71
3429 8138 7.554476 ACTTTATCATTTAGAGGTTCCAGAAGC 59.446 37.037 1.33 1.33 38.96 3.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
51 52 4.803426 CACGCGTGCTCCTCCTCC 62.803 72.222 28.16 0.00 0.00 4.30
52 53 2.697761 TACACGCGTGCTCCTCCTC 61.698 63.158 37.35 0.00 0.00 3.71
53 54 2.675423 TACACGCGTGCTCCTCCT 60.675 61.111 37.35 19.49 0.00 3.69
54 55 2.506438 GTACACGCGTGCTCCTCC 60.506 66.667 37.35 15.69 0.00 4.30
55 56 2.506438 GGTACACGCGTGCTCCTC 60.506 66.667 37.35 21.70 0.00 3.71
56 57 3.299977 TGGTACACGCGTGCTCCT 61.300 61.111 35.41 23.79 0.00 3.69
69 70 1.203313 AGCTTGGGAAGAGGAGTGGTA 60.203 52.381 0.00 0.00 0.00 3.25
72 73 0.251634 GGAGCTTGGGAAGAGGAGTG 59.748 60.000 0.00 0.00 0.00 3.51
75 76 0.475632 TTGGGAGCTTGGGAAGAGGA 60.476 55.000 0.00 0.00 0.00 3.71
77 78 1.684248 CCATTGGGAGCTTGGGAAGAG 60.684 57.143 0.00 0.00 35.59 2.85
78 79 0.332632 CCATTGGGAGCTTGGGAAGA 59.667 55.000 0.00 0.00 35.59 2.87
79 80 1.325476 GCCATTGGGAGCTTGGGAAG 61.325 60.000 4.53 0.00 35.59 3.46
80 81 1.305213 GCCATTGGGAGCTTGGGAA 60.305 57.895 4.53 0.00 35.59 3.97
82 83 1.610086 TTGCCATTGGGAGCTTGGG 60.610 57.895 4.53 0.00 35.59 4.12
83 84 0.901580 ACTTGCCATTGGGAGCTTGG 60.902 55.000 4.53 0.00 35.59 3.61
84 85 0.245539 CACTTGCCATTGGGAGCTTG 59.754 55.000 4.53 0.00 35.59 4.01
87 88 0.323360 TACCACTTGCCATTGGGAGC 60.323 55.000 4.53 0.00 37.18 4.70
88 89 1.281867 TCTACCACTTGCCATTGGGAG 59.718 52.381 4.53 0.06 44.47 4.30
89 90 1.281867 CTCTACCACTTGCCATTGGGA 59.718 52.381 4.53 0.00 37.18 4.37
90 91 1.755179 CTCTACCACTTGCCATTGGG 58.245 55.000 4.53 0.00 37.18 4.12
91 92 1.098050 GCTCTACCACTTGCCATTGG 58.902 55.000 0.00 0.00 39.00 3.16
92 93 1.825090 TGCTCTACCACTTGCCATTG 58.175 50.000 0.00 0.00 0.00 2.82
94 95 1.614317 GGTTGCTCTACCACTTGCCAT 60.614 52.381 0.00 0.00 38.12 4.40
95 96 0.250727 GGTTGCTCTACCACTTGCCA 60.251 55.000 0.00 0.00 38.12 4.92
96 97 0.960861 GGGTTGCTCTACCACTTGCC 60.961 60.000 3.17 0.00 40.09 4.52
97 98 0.036875 AGGGTTGCTCTACCACTTGC 59.963 55.000 3.17 0.00 40.09 4.01
98 99 2.568623 AAGGGTTGCTCTACCACTTG 57.431 50.000 3.17 0.00 40.09 3.16
99 100 6.382919 TTTATAAGGGTTGCTCTACCACTT 57.617 37.500 3.17 6.27 40.09 3.16
100 101 5.104485 CCTTTATAAGGGTTGCTCTACCACT 60.104 44.000 5.46 0.00 45.27 4.00
101 102 5.123936 CCTTTATAAGGGTTGCTCTACCAC 58.876 45.833 5.46 0.00 45.27 4.16
102 103 5.367945 CCTTTATAAGGGTTGCTCTACCA 57.632 43.478 5.46 0.00 45.27 3.25
115 116 5.663556 AGGAGAGTTGAGACCCCTTTATAAG 59.336 44.000 0.00 0.00 0.00 1.73
116 117 5.600749 AGGAGAGTTGAGACCCCTTTATAA 58.399 41.667 0.00 0.00 0.00 0.98
117 118 5.209659 GAGGAGAGTTGAGACCCCTTTATA 58.790 45.833 0.00 0.00 0.00 0.98
118 119 4.034410 GAGGAGAGTTGAGACCCCTTTAT 58.966 47.826 0.00 0.00 0.00 1.40
119 120 3.181410 TGAGGAGAGTTGAGACCCCTTTA 60.181 47.826 0.00 0.00 0.00 1.85
121 122 1.150135 TGAGGAGAGTTGAGACCCCTT 59.850 52.381 0.00 0.00 0.00 3.95
122 123 0.787084 TGAGGAGAGTTGAGACCCCT 59.213 55.000 0.00 0.00 0.00 4.79
124 125 2.252714 AGTTGAGGAGAGTTGAGACCC 58.747 52.381 0.00 0.00 0.00 4.46
125 126 4.083565 ACTAGTTGAGGAGAGTTGAGACC 58.916 47.826 0.00 0.00 0.00 3.85
126 127 6.127842 CCTTACTAGTTGAGGAGAGTTGAGAC 60.128 46.154 16.25 0.00 32.11 3.36
127 128 5.946972 CCTTACTAGTTGAGGAGAGTTGAGA 59.053 44.000 16.25 0.00 32.11 3.27
128 129 5.712917 ACCTTACTAGTTGAGGAGAGTTGAG 59.287 44.000 24.18 3.14 34.61 3.02
129 130 5.477291 CACCTTACTAGTTGAGGAGAGTTGA 59.523 44.000 24.18 0.00 34.61 3.18
130 131 5.336849 CCACCTTACTAGTTGAGGAGAGTTG 60.337 48.000 24.18 14.58 34.61 3.16
132 133 4.345854 CCACCTTACTAGTTGAGGAGAGT 58.654 47.826 24.18 6.16 34.61 3.24
133 134 3.702045 CCCACCTTACTAGTTGAGGAGAG 59.298 52.174 24.18 15.50 34.61 3.20
134 135 3.335786 TCCCACCTTACTAGTTGAGGAGA 59.664 47.826 24.18 16.52 34.61 3.71
137 138 3.442076 AGTCCCACCTTACTAGTTGAGG 58.558 50.000 18.53 18.53 36.62 3.86
138 139 6.210984 AGTTTAGTCCCACCTTACTAGTTGAG 59.789 42.308 0.00 0.00 30.27 3.02
140 141 6.356186 AGTTTAGTCCCACCTTACTAGTTG 57.644 41.667 0.00 0.00 30.27 3.16
141 142 6.294955 CGAAGTTTAGTCCCACCTTACTAGTT 60.295 42.308 0.00 0.00 30.27 2.24
143 144 5.648572 CGAAGTTTAGTCCCACCTTACTAG 58.351 45.833 0.00 0.00 30.27 2.57
144 145 4.082026 GCGAAGTTTAGTCCCACCTTACTA 60.082 45.833 0.00 0.00 0.00 1.82
147 148 2.633967 TGCGAAGTTTAGTCCCACCTTA 59.366 45.455 0.00 0.00 0.00 2.69
148 149 1.418637 TGCGAAGTTTAGTCCCACCTT 59.581 47.619 0.00 0.00 0.00 3.50
151 152 1.154197 GGTGCGAAGTTTAGTCCCAC 58.846 55.000 0.00 0.00 0.00 4.61
152 153 0.759959 TGGTGCGAAGTTTAGTCCCA 59.240 50.000 0.00 0.00 0.00 4.37
153 154 1.154197 GTGGTGCGAAGTTTAGTCCC 58.846 55.000 0.00 0.00 0.00 4.46
155 156 1.798813 CAGGTGGTGCGAAGTTTAGTC 59.201 52.381 0.00 0.00 0.00 2.59
156 157 1.878953 CAGGTGGTGCGAAGTTTAGT 58.121 50.000 0.00 0.00 0.00 2.24
158 159 2.624169 GCAGGTGGTGCGAAGTTTA 58.376 52.632 0.00 0.00 43.99 2.01
159 160 3.432186 GCAGGTGGTGCGAAGTTT 58.568 55.556 0.00 0.00 43.99 2.66
167 168 1.210234 TGTATGAGATGGCAGGTGGTG 59.790 52.381 0.00 0.00 0.00 4.17
168 169 1.583556 TGTATGAGATGGCAGGTGGT 58.416 50.000 0.00 0.00 0.00 4.16
170 171 2.501261 CCATGTATGAGATGGCAGGTG 58.499 52.381 0.00 0.00 34.21 4.00
171 172 1.422781 CCCATGTATGAGATGGCAGGT 59.577 52.381 0.00 0.00 39.36 4.00
172 173 1.885359 GCCCATGTATGAGATGGCAGG 60.885 57.143 0.00 0.00 39.36 4.85
173 174 1.531423 GCCCATGTATGAGATGGCAG 58.469 55.000 0.00 0.00 39.36 4.85
174 175 0.111061 GGCCCATGTATGAGATGGCA 59.889 55.000 7.51 0.00 39.36 4.92
175 176 0.403271 AGGCCCATGTATGAGATGGC 59.597 55.000 0.00 0.00 39.36 4.40
176 177 1.701292 TGAGGCCCATGTATGAGATGG 59.299 52.381 0.00 0.00 40.25 3.51
177 178 3.072038 TCTTGAGGCCCATGTATGAGATG 59.928 47.826 0.00 0.00 0.00 2.90
178 179 3.321039 TCTTGAGGCCCATGTATGAGAT 58.679 45.455 0.00 0.00 0.00 2.75
179 180 2.763039 TCTTGAGGCCCATGTATGAGA 58.237 47.619 0.00 0.00 0.00 3.27
180 181 3.784511 ATCTTGAGGCCCATGTATGAG 57.215 47.619 0.00 0.00 0.00 2.90
181 182 5.645056 TTAATCTTGAGGCCCATGTATGA 57.355 39.130 0.00 0.00 0.00 2.15
182 183 6.005823 TGATTAATCTTGAGGCCCATGTATG 58.994 40.000 16.24 0.00 0.00 2.39
183 184 6.204852 TGATTAATCTTGAGGCCCATGTAT 57.795 37.500 16.24 0.00 0.00 2.29
184 185 5.456619 CCTGATTAATCTTGAGGCCCATGTA 60.457 44.000 16.24 0.00 0.00 2.29
185 186 4.467769 CTGATTAATCTTGAGGCCCATGT 58.532 43.478 16.24 0.00 0.00 3.21
186 187 3.825014 CCTGATTAATCTTGAGGCCCATG 59.175 47.826 16.24 0.00 0.00 3.66
187 188 3.181425 CCCTGATTAATCTTGAGGCCCAT 60.181 47.826 16.24 0.00 0.00 4.00
188 189 2.175499 CCCTGATTAATCTTGAGGCCCA 59.825 50.000 16.24 0.00 0.00 5.36
189 190 2.443255 TCCCTGATTAATCTTGAGGCCC 59.557 50.000 16.24 0.00 0.00 5.80
190 191 3.864789 TCCCTGATTAATCTTGAGGCC 57.135 47.619 16.24 0.00 0.00 5.19
191 192 6.429385 CACTAATCCCTGATTAATCTTGAGGC 59.571 42.308 16.24 0.00 34.64 4.70
192 193 7.512992 ACACTAATCCCTGATTAATCTTGAGG 58.487 38.462 16.24 13.71 34.64 3.86
193 194 8.428063 AGACACTAATCCCTGATTAATCTTGAG 58.572 37.037 16.24 5.76 34.64 3.02
194 195 8.324191 AGACACTAATCCCTGATTAATCTTGA 57.676 34.615 16.24 10.03 34.64 3.02
195 196 8.970859 AAGACACTAATCCCTGATTAATCTTG 57.029 34.615 16.24 9.04 34.64 3.02
221 222 9.004231 GGATTATGGATGGGTTTAGGTCTATAT 57.996 37.037 0.00 0.00 0.00 0.86
223 224 6.797540 TGGATTATGGATGGGTTTAGGTCTAT 59.202 38.462 0.00 0.00 0.00 1.98
224 225 6.154645 TGGATTATGGATGGGTTTAGGTCTA 58.845 40.000 0.00 0.00 0.00 2.59
225 226 4.981647 TGGATTATGGATGGGTTTAGGTCT 59.018 41.667 0.00 0.00 0.00 3.85
227 228 5.043732 TGTTGGATTATGGATGGGTTTAGGT 60.044 40.000 0.00 0.00 0.00 3.08
228 229 5.454062 TGTTGGATTATGGATGGGTTTAGG 58.546 41.667 0.00 0.00 0.00 2.69
229 230 6.461509 GCTTGTTGGATTATGGATGGGTTTAG 60.462 42.308 0.00 0.00 0.00 1.85
230 231 5.362430 GCTTGTTGGATTATGGATGGGTTTA 59.638 40.000 0.00 0.00 0.00 2.01
233 234 3.299503 GCTTGTTGGATTATGGATGGGT 58.700 45.455 0.00 0.00 0.00 4.51
234 235 3.068590 GTGCTTGTTGGATTATGGATGGG 59.931 47.826 0.00 0.00 0.00 4.00
237 238 4.079558 AGGAGTGCTTGTTGGATTATGGAT 60.080 41.667 0.00 0.00 0.00 3.41
238 239 3.266772 AGGAGTGCTTGTTGGATTATGGA 59.733 43.478 0.00 0.00 0.00 3.41
239 240 3.624777 AGGAGTGCTTGTTGGATTATGG 58.375 45.455 0.00 0.00 0.00 2.74
240 241 5.220931 GCTTAGGAGTGCTTGTTGGATTATG 60.221 44.000 0.00 0.00 0.00 1.90
241 242 4.884164 GCTTAGGAGTGCTTGTTGGATTAT 59.116 41.667 0.00 0.00 0.00 1.28
242 243 4.261801 GCTTAGGAGTGCTTGTTGGATTA 58.738 43.478 0.00 0.00 0.00 1.75
243 244 3.084786 GCTTAGGAGTGCTTGTTGGATT 58.915 45.455 0.00 0.00 0.00 3.01
244 245 2.040278 TGCTTAGGAGTGCTTGTTGGAT 59.960 45.455 0.00 0.00 0.00 3.41
245 246 1.419762 TGCTTAGGAGTGCTTGTTGGA 59.580 47.619 0.00 0.00 0.00 3.53
246 247 1.896220 TGCTTAGGAGTGCTTGTTGG 58.104 50.000 0.00 0.00 0.00 3.77
247 248 3.988379 TTTGCTTAGGAGTGCTTGTTG 57.012 42.857 0.00 0.00 0.00 3.33
248 249 4.207165 TCTTTTGCTTAGGAGTGCTTGTT 58.793 39.130 0.00 0.00 0.00 2.83
250 251 4.456911 TCATCTTTTGCTTAGGAGTGCTTG 59.543 41.667 0.00 0.00 0.00 4.01
251 252 4.655963 TCATCTTTTGCTTAGGAGTGCTT 58.344 39.130 0.00 0.00 0.00 3.91
252 253 4.292186 TCATCTTTTGCTTAGGAGTGCT 57.708 40.909 0.00 0.00 0.00 4.40
278 3908 3.618690 AAGAAGTACACTGGGAGCATC 57.381 47.619 0.00 0.00 0.00 3.91
325 3960 4.421033 TCAAAGTTGTGTTGCGTACAAA 57.579 36.364 2.39 0.00 39.50 2.83
331 3966 3.483196 CACTGATTCAAAGTTGTGTTGCG 59.517 43.478 0.00 0.00 0.00 4.85
332 3967 4.423732 ACACTGATTCAAAGTTGTGTTGC 58.576 39.130 3.52 0.00 35.47 4.17
340 3987 7.607991 CCTTCCATACTTACACTGATTCAAAGT 59.392 37.037 6.68 6.68 34.86 2.66
341 3988 7.414540 GCCTTCCATACTTACACTGATTCAAAG 60.415 40.741 0.00 0.00 0.00 2.77
356 4003 0.988832 TTTCCGGTGCCTTCCATACT 59.011 50.000 0.00 0.00 0.00 2.12
358 4005 2.818751 AATTTCCGGTGCCTTCCATA 57.181 45.000 0.00 0.00 0.00 2.74
391 4038 0.614979 GCCTCCTACTCACACCCTCA 60.615 60.000 0.00 0.00 0.00 3.86
397 4044 1.982395 CCGGTGCCTCCTACTCACA 60.982 63.158 0.00 0.00 32.69 3.58
415 4062 1.632422 TTCCTCGTCGGCGTAATTTC 58.368 50.000 10.18 0.00 39.49 2.17
416 4063 2.083167 TTTCCTCGTCGGCGTAATTT 57.917 45.000 10.18 0.00 39.49 1.82
417 4064 2.199236 GATTTCCTCGTCGGCGTAATT 58.801 47.619 10.18 0.00 39.49 1.40
418 4065 1.849097 GATTTCCTCGTCGGCGTAAT 58.151 50.000 10.18 5.44 39.49 1.89
420 4067 1.063006 CGATTTCCTCGTCGGCGTA 59.937 57.895 10.18 0.00 42.56 4.42
465 4133 4.065088 TGGTGACTTTCTGATTGTAGCAC 58.935 43.478 0.00 0.00 0.00 4.40
479 4147 0.674895 GAAGCAGCCGATGGTGACTT 60.675 55.000 0.00 0.00 42.66 3.01
483 4151 1.493950 GATCGAAGCAGCCGATGGTG 61.494 60.000 10.83 0.00 45.49 4.17
484 4152 1.227380 GATCGAAGCAGCCGATGGT 60.227 57.895 10.83 0.00 45.49 3.55
544 4212 3.803082 CGGCATTGTGGCACTCCG 61.803 66.667 19.83 19.90 43.94 4.63
563 4231 1.334869 CTTCTGCGTGTCCTGCTTTTT 59.665 47.619 0.00 0.00 0.00 1.94
600 4790 3.279116 GACTTGCACAGCGTGGCA 61.279 61.111 10.02 3.32 38.46 4.92
624 4814 1.740025 CTGCTTCCCTCGGAACAAATC 59.260 52.381 0.00 0.00 36.71 2.17
681 4871 1.969809 GCATCGCGTCTGTTGCATCA 61.970 55.000 5.77 0.00 35.22 3.07
683 4873 2.753966 GGCATCGCGTCTGTTGCAT 61.754 57.895 5.77 0.00 36.82 3.96
701 4893 1.413118 ACCAGGAACAAAAAGCCCTG 58.587 50.000 0.00 0.00 44.29 4.45
893 5103 3.452627 AGTTTGTCTGTGTGAAGAGAGGT 59.547 43.478 0.00 0.00 0.00 3.85
1140 5385 0.042188 CGTGCATGCGTAGGTATTGC 60.042 55.000 14.09 0.00 0.00 3.56
1160 5405 2.689034 AGCGAGGAGGGGGAAAGG 60.689 66.667 0.00 0.00 0.00 3.11
1162 5407 3.717294 GCAGCGAGGAGGGGGAAA 61.717 66.667 0.00 0.00 0.00 3.13
1221 5706 0.941463 CTCGCCGATCTGCCATACAC 60.941 60.000 3.31 0.00 0.00 2.90
1508 6035 1.815421 GATGGCACCAGTAGCACCG 60.815 63.158 0.00 0.00 0.00 4.94
1509 6036 1.452108 GGATGGCACCAGTAGCACC 60.452 63.158 0.00 0.00 0.00 5.01
1518 6045 1.851304 TCATGAAAAGGGATGGCACC 58.149 50.000 0.00 0.00 0.00 5.01
1519 6046 3.025978 TCATCATGAAAAGGGATGGCAC 58.974 45.455 0.00 0.00 39.07 5.01
1520 6047 3.385314 TCATCATGAAAAGGGATGGCA 57.615 42.857 0.00 0.00 39.07 4.92
1521 6048 4.150359 AGATCATCATGAAAAGGGATGGC 58.850 43.478 0.00 0.00 39.07 4.40
1522 6049 5.509163 GCAAGATCATCATGAAAAGGGATGG 60.509 44.000 0.00 0.00 39.07 3.51
1523 6050 5.529791 GCAAGATCATCATGAAAAGGGATG 58.470 41.667 0.00 0.00 39.75 3.51
1524 6051 4.277672 CGCAAGATCATCATGAAAAGGGAT 59.722 41.667 0.00 0.00 43.02 3.85
1525 6052 3.628942 CGCAAGATCATCATGAAAAGGGA 59.371 43.478 0.00 0.00 43.02 4.20
1526 6053 3.379372 ACGCAAGATCATCATGAAAAGGG 59.621 43.478 0.00 0.00 43.62 3.95
1527 6054 4.627611 ACGCAAGATCATCATGAAAAGG 57.372 40.909 0.00 0.00 43.62 3.11
1547 6074 1.880027 AGATTCCAAGTGAACCGCAAC 59.120 47.619 0.00 0.00 35.31 4.17
1576 6103 1.171308 AGGCAGCAGCAACAACATAG 58.829 50.000 2.65 0.00 44.61 2.23
1604 6131 8.946085 TCGTCGTTATAAAACTAGTAGGAGAAA 58.054 33.333 0.00 0.00 33.15 2.52
1606 6133 8.554528 CATCGTCGTTATAAAACTAGTAGGAGA 58.445 37.037 0.00 0.00 33.15 3.71
1610 6137 9.874215 TGATCATCGTCGTTATAAAACTAGTAG 57.126 33.333 0.00 0.00 33.15 2.57
1611 6138 9.655769 GTGATCATCGTCGTTATAAAACTAGTA 57.344 33.333 0.00 0.00 33.15 1.82
1612 6139 8.404000 AGTGATCATCGTCGTTATAAAACTAGT 58.596 33.333 0.00 0.00 33.15 2.57
1613 6140 8.783999 AGTGATCATCGTCGTTATAAAACTAG 57.216 34.615 0.00 0.00 33.15 2.57
1614 6141 7.585210 CGAGTGATCATCGTCGTTATAAAACTA 59.415 37.037 15.20 0.00 35.48 2.24
1616 6143 6.412943 TCGAGTGATCATCGTCGTTATAAAAC 59.587 38.462 19.80 0.00 40.95 2.43
1617 6144 6.488817 TCGAGTGATCATCGTCGTTATAAAA 58.511 36.000 19.80 3.31 40.95 1.52
1618 6145 6.051646 TCGAGTGATCATCGTCGTTATAAA 57.948 37.500 19.80 3.83 40.95 1.40
1620 6147 4.748600 ACTCGAGTGATCATCGTCGTTATA 59.251 41.667 19.30 6.02 40.95 0.98
1621 6148 3.560481 ACTCGAGTGATCATCGTCGTTAT 59.440 43.478 19.30 8.79 40.95 1.89
1691 6233 4.492998 GGTAACAAACGAACGAACAAACTG 59.507 41.667 0.14 0.00 0.00 3.16
1700 6242 3.426191 TCGATCAAGGTAACAAACGAACG 59.574 43.478 0.00 0.00 41.41 3.95
1701 6243 4.977741 TCGATCAAGGTAACAAACGAAC 57.022 40.909 0.00 0.00 41.41 3.95
1702 6244 4.628333 GGATCGATCAAGGTAACAAACGAA 59.372 41.667 25.93 0.00 41.41 3.85
1703 6245 4.178540 GGATCGATCAAGGTAACAAACGA 58.821 43.478 25.93 0.00 41.41 3.85
1704 6246 3.000078 CGGATCGATCAAGGTAACAAACG 60.000 47.826 25.93 11.97 41.41 3.60
1757 6299 2.047274 AAGGTGGCCACGATCACG 60.047 61.111 29.08 0.00 45.75 4.35
1758 6300 2.100631 CGAAGGTGGCCACGATCAC 61.101 63.158 29.08 15.11 0.00 3.06
1759 6301 1.822114 TTCGAAGGTGGCCACGATCA 61.822 55.000 29.08 15.99 35.52 2.92
1760 6302 0.462047 ATTCGAAGGTGGCCACGATC 60.462 55.000 29.08 25.57 35.52 3.69
1761 6303 0.035439 AATTCGAAGGTGGCCACGAT 60.035 50.000 29.08 20.17 35.52 3.73
1762 6304 0.672401 GAATTCGAAGGTGGCCACGA 60.672 55.000 29.08 20.30 34.34 4.35
1763 6305 1.794222 GAATTCGAAGGTGGCCACG 59.206 57.895 29.08 18.18 0.00 4.94
1764 6306 0.672401 TCGAATTCGAAGGTGGCCAC 60.672 55.000 28.57 28.57 46.30 5.01
1765 6307 1.674637 TCGAATTCGAAGGTGGCCA 59.325 52.632 27.36 0.00 46.30 5.36
1766 6308 4.609995 TCGAATTCGAAGGTGGCC 57.390 55.556 27.36 0.00 46.30 5.36
1790 6332 0.879090 CGGAGTTGGTTGGCCTAAAC 59.121 55.000 3.32 0.00 35.27 2.01
1843 6386 9.275398 ACCATCACGTTTGAACTAGTAAAATAA 57.725 29.630 0.00 0.00 34.61 1.40
1848 6404 7.874016 ACATTACCATCACGTTTGAACTAGTAA 59.126 33.333 0.00 0.00 34.61 2.24
1850 6406 6.228258 ACATTACCATCACGTTTGAACTAGT 58.772 36.000 0.00 0.00 34.61 2.57
1854 6410 4.381566 GCAACATTACCATCACGTTTGAAC 59.618 41.667 0.00 0.00 34.61 3.18
1857 6413 3.894920 TGCAACATTACCATCACGTTTG 58.105 40.909 0.00 0.00 0.00 2.93
1859 6415 3.755905 TGATGCAACATTACCATCACGTT 59.244 39.130 0.00 0.00 40.09 3.99
1860 6416 3.342719 TGATGCAACATTACCATCACGT 58.657 40.909 0.00 0.00 40.09 4.49
1862 6418 4.097714 CGTTGATGCAACATTACCATCAC 58.902 43.478 10.48 0.00 43.41 3.06
1865 6421 3.088532 ACCGTTGATGCAACATTACCAT 58.911 40.909 10.48 0.00 43.70 3.55
1866 6422 2.509569 ACCGTTGATGCAACATTACCA 58.490 42.857 10.48 0.00 43.70 3.25
1878 6434 9.498176 AGTACAAAGACTTATTTAACCGTTGAT 57.502 29.630 0.00 0.00 0.00 2.57
1890 6446 9.367444 GCACTAATACACAGTACAAAGACTTAT 57.633 33.333 0.00 0.00 0.00 1.73
1891 6447 7.539710 CGCACTAATACACAGTACAAAGACTTA 59.460 37.037 0.00 0.00 0.00 2.24
1892 6448 6.365247 CGCACTAATACACAGTACAAAGACTT 59.635 38.462 0.00 0.00 0.00 3.01
1893 6449 5.862323 CGCACTAATACACAGTACAAAGACT 59.138 40.000 0.00 0.00 0.00 3.24
1894 6450 5.444218 GCGCACTAATACACAGTACAAAGAC 60.444 44.000 0.30 0.00 0.00 3.01
1895 6451 4.624024 GCGCACTAATACACAGTACAAAGA 59.376 41.667 0.30 0.00 0.00 2.52
1896 6452 4.625742 AGCGCACTAATACACAGTACAAAG 59.374 41.667 11.47 0.00 0.00 2.77
1897 6453 4.387559 CAGCGCACTAATACACAGTACAAA 59.612 41.667 11.47 0.00 0.00 2.83
1898 6454 3.924073 CAGCGCACTAATACACAGTACAA 59.076 43.478 11.47 0.00 0.00 2.41
1907 6481 0.921347 CCACGTCAGCGCACTAATAC 59.079 55.000 11.47 0.00 42.83 1.89
2420 7014 1.571460 CGTTTGTGCACCAGCTCTC 59.429 57.895 15.69 0.00 42.74 3.20
2529 7125 0.320247 GTCTGCTGTGACCTGTGAGG 60.320 60.000 0.00 0.00 42.49 3.86
2531 7127 0.390492 CTGTCTGCTGTGACCTGTGA 59.610 55.000 0.00 0.00 36.21 3.58
2532 7128 1.226686 GCTGTCTGCTGTGACCTGTG 61.227 60.000 0.00 0.00 38.95 3.66
2533 7129 1.070445 GCTGTCTGCTGTGACCTGT 59.930 57.895 0.00 0.00 38.95 4.00
2534 7130 1.070275 TGCTGTCTGCTGTGACCTG 59.930 57.895 3.20 0.00 43.37 4.00
2535 7131 1.070445 GTGCTGTCTGCTGTGACCT 59.930 57.895 3.20 0.00 43.37 3.85
2536 7132 1.963338 GGTGCTGTCTGCTGTGACC 60.963 63.158 3.20 0.00 43.37 4.02
2537 7133 0.815213 TTGGTGCTGTCTGCTGTGAC 60.815 55.000 3.20 0.00 43.37 3.67
2621 7217 4.019321 AGGGAGTTCAAAATGAGAATCCGA 60.019 41.667 0.00 0.00 0.00 4.55
2623 7219 5.124617 GTGAGGGAGTTCAAAATGAGAATCC 59.875 44.000 0.00 0.00 0.00 3.01
2639 7236 3.058016 TCGTGTAGTAAAACGTGAGGGAG 60.058 47.826 0.00 0.00 40.61 4.30
2700 7297 1.205055 GGGTAGCCTAGCCTTTCAGT 58.795 55.000 12.74 0.00 42.93 3.41
2705 7302 1.205055 GAAGTGGGTAGCCTAGCCTT 58.795 55.000 20.01 7.76 46.32 4.35
2706 7303 0.340208 AGAAGTGGGTAGCCTAGCCT 59.660 55.000 20.01 0.62 46.32 4.58
2707 7304 0.753867 GAGAAGTGGGTAGCCTAGCC 59.246 60.000 13.11 13.11 46.36 3.93
2708 7305 1.486211 TGAGAAGTGGGTAGCCTAGC 58.514 55.000 13.11 2.69 0.00 3.42
2709 7306 6.042093 TGAATTATGAGAAGTGGGTAGCCTAG 59.958 42.308 13.11 0.00 0.00 3.02
2710 7307 5.903010 TGAATTATGAGAAGTGGGTAGCCTA 59.097 40.000 13.11 0.00 0.00 3.93
2935 7532 7.867909 AGATAATTTCATCGACGCTTTCTATCA 59.132 33.333 0.00 0.00 0.00 2.15
3003 7600 4.584327 TTAGCTTTGCCCTCTTTGTTTC 57.416 40.909 0.00 0.00 0.00 2.78
3029 7629 2.678956 GCTCTGCACTGCACTCTGC 61.679 63.158 0.00 0.00 45.29 4.26
3030 7630 0.883370 TTGCTCTGCACTGCACTCTG 60.883 55.000 8.21 0.00 38.71 3.35
3031 7631 0.603172 CTTGCTCTGCACTGCACTCT 60.603 55.000 8.21 0.00 38.71 3.24
3032 7632 0.602106 TCTTGCTCTGCACTGCACTC 60.602 55.000 8.21 0.00 38.71 3.51
3035 7635 1.146707 TGTCTTGCTCTGCACTGCA 59.853 52.632 3.11 3.11 38.71 4.41
3036 7636 1.573436 GTGTCTTGCTCTGCACTGC 59.427 57.895 0.00 0.00 38.71 4.40
3037 7637 1.563435 CGGTGTCTTGCTCTGCACTG 61.563 60.000 0.00 0.00 38.71 3.66
3086 7686 1.599518 GTGGGGTGACGACATTGCA 60.600 57.895 0.00 0.00 0.00 4.08
3095 7695 1.164041 CCGTGTTGAAGTGGGGTGAC 61.164 60.000 0.00 0.00 0.00 3.67
3151 7751 8.975925 TTTTCCAAACCCTTACCCTAATTAAT 57.024 30.769 0.00 0.00 0.00 1.40
3152 7752 8.794364 TTTTTCCAAACCCTTACCCTAATTAA 57.206 30.769 0.00 0.00 0.00 1.40
3232 7832 0.106149 GCCTTCCCATACCGGTACAG 59.894 60.000 18.55 12.67 0.00 2.74
3233 7833 0.325860 AGCCTTCCCATACCGGTACA 60.326 55.000 18.55 0.00 0.00 2.90
3238 7845 3.162666 TGAGTATAGCCTTCCCATACCG 58.837 50.000 0.00 0.00 0.00 4.02
3252 7859 3.822735 GCAGGTACACGGGTATGAGTATA 59.177 47.826 0.00 0.00 0.00 1.47
3257 7864 1.491668 ATGCAGGTACACGGGTATGA 58.508 50.000 0.00 0.00 0.00 2.15
3279 7886 2.569404 AGGAGATTTTGAGTCGAGGCTT 59.431 45.455 0.00 0.00 0.00 4.35
3318 8019 6.686630 TGATCAACACATTTAAACATGACCC 58.313 36.000 0.00 0.00 0.00 4.46
3334 8035 8.628280 TCATGAGTTTACAAAACATGATCAACA 58.372 29.630 0.00 0.00 38.15 3.33
3404 8105 7.554118 TGCTTCTGGAACCTCTAAATGATAAAG 59.446 37.037 0.00 0.00 0.00 1.85
3407 8116 6.560003 TGCTTCTGGAACCTCTAAATGATA 57.440 37.500 0.00 0.00 0.00 2.15
3422 8131 7.621428 TTTTCTCTATTGAAGATGCTTCTGG 57.379 36.000 2.39 0.00 32.41 3.86


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.