Multiple sequence alignment - TraesCS4A01G358700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G358700 chr4A 100.000 5346 0 0 1 5346 631920291 631925636 0.000000e+00 9873.0
1 TraesCS4A01G358700 chr5D 94.777 2355 79 21 2436 4751 537673311 537675660 0.000000e+00 3627.0
2 TraesCS4A01G358700 chr5D 86.171 1938 141 70 519 2390 537671427 537673303 0.000000e+00 1977.0
3 TraesCS4A01G358700 chr5D 88.832 394 19 13 4959 5346 537675745 537676119 1.360000e-125 460.0
4 TraesCS4A01G358700 chr5D 100.000 37 0 0 4746 4782 537675673 537675709 9.610000e-08 69.4
5 TraesCS4A01G358700 chr5B 87.867 2893 188 79 469 3258 678335596 678338428 0.000000e+00 3247.0
6 TraesCS4A01G358700 chr5B 91.753 1734 68 22 3676 5346 678338482 678340203 0.000000e+00 2340.0
7 TraesCS4A01G358700 chr5B 98.333 300 5 0 94 393 393991884 393992183 1.320000e-145 527.0
8 TraesCS4A01G358700 chr5B 86.561 253 29 4 5097 5346 678439456 678439706 1.900000e-69 274.0
9 TraesCS4A01G358700 chr7A 98.333 300 5 0 94 393 671709416 671709117 1.320000e-145 527.0
10 TraesCS4A01G358700 chr3D 94.558 294 16 0 100 393 524489067 524488774 6.310000e-124 455.0
11 TraesCS4A01G358700 chr2D 93.069 303 20 1 91 393 153271154 153270853 4.910000e-120 442.0
12 TraesCS4A01G358700 chr2D 93.023 301 20 1 93 393 44000898 44001197 6.360000e-119 438.0
13 TraesCS4A01G358700 chr6B 92.333 300 22 1 94 393 83252167 83251869 4.950000e-115 425.0
14 TraesCS4A01G358700 chr1D 90.728 302 26 2 93 393 455642430 455642730 8.340000e-108 401.0
15 TraesCS4A01G358700 chr7B 90.610 213 19 1 94 306 697134032 697134243 1.130000e-71 281.0
16 TraesCS4A01G358700 chr7B 93.684 95 6 0 299 393 697160953 697161047 5.580000e-30 143.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G358700 chr4A 631920291 631925636 5345 False 9873.00 9873 100.000 1 5346 1 chr4A.!!$F1 5345
1 TraesCS4A01G358700 chr5D 537671427 537676119 4692 False 1533.35 3627 92.445 519 5346 4 chr5D.!!$F1 4827
2 TraesCS4A01G358700 chr5B 678335596 678340203 4607 False 2793.50 3247 89.810 469 5346 2 chr5B.!!$F3 4877

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
501 504 0.043637 TTAGGGTGGAGTGGGTAGGG 59.956 60.000 0.00 0.0 0.00 3.53 F
615 624 0.247736 CGACCTTTGACTCCTCCTGG 59.752 60.000 0.00 0.0 0.00 4.45 F
1356 1455 0.320073 CCACACCAAATGCCTGCTTG 60.320 55.000 0.00 0.0 0.00 4.01 F
1357 1456 0.390124 CACACCAAATGCCTGCTTGT 59.610 50.000 0.00 0.0 0.00 3.16 F
1536 1658 0.463474 GCTGGAGGGTTCTGATGCTC 60.463 60.000 0.00 0.0 0.00 4.26 F
1646 1768 0.749091 TAGCATGTGCCTGATGCCAC 60.749 55.000 0.57 0.0 46.24 5.01 F
1920 2047 0.753867 TTACCTTGCGTGTCTGTGGA 59.246 50.000 0.00 0.0 0.00 4.02 F
2161 2289 1.078214 ATCGACCGTCTACCGACCA 60.078 57.895 0.00 0.0 39.56 4.02 F
3853 4008 1.229336 CACAGGAGAGACTGGGGGT 60.229 63.158 0.00 0.0 42.75 4.95 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1693 1815 0.031857 TGAACCCACAAAATGCGCAG 59.968 50.000 18.32 4.18 0.00 5.18 R
1793 1916 0.673985 GAACACCTCCAACAAAGCCC 59.326 55.000 0.00 0.00 0.00 5.19 R
2790 2921 2.029649 AGCACTTGCAAAACCAGCATAG 60.030 45.455 0.00 0.00 45.16 2.23 R
3261 3392 2.031012 TGCTCCCAAGACACAGCG 59.969 61.111 0.00 0.00 34.39 5.18 R
3500 3632 2.159043 ACAGGTGCATCTCATCGTAAGG 60.159 50.000 0.00 0.00 38.47 2.69 R
3616 3755 1.282875 GGCCTCGAAACTGTTGTGC 59.717 57.895 0.00 0.00 0.00 4.57 R
3847 4002 2.477893 AATTCCTGCACCACCCCCA 61.478 57.895 0.00 0.00 0.00 4.96 R
4006 4161 2.334971 TCGAAACATTGTGCATGCTG 57.665 45.000 20.33 11.24 36.14 4.41 R
5300 5527 0.179062 ACATGGAGATCAAGCGAGCC 60.179 55.000 0.00 0.00 0.00 4.70 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 7.950236 CGTACCCATTCGATAAATCAGATTAC 58.050 38.462 0.00 0.00 0.00 1.89
26 27 7.597369 CGTACCCATTCGATAAATCAGATTACA 59.403 37.037 0.00 0.00 0.00 2.41
27 28 9.436957 GTACCCATTCGATAAATCAGATTACAT 57.563 33.333 0.00 0.00 0.00 2.29
28 29 8.924511 ACCCATTCGATAAATCAGATTACATT 57.075 30.769 0.00 0.00 0.00 2.71
29 30 9.354673 ACCCATTCGATAAATCAGATTACATTT 57.645 29.630 0.00 0.00 0.00 2.32
34 35 9.929722 TTCGATAAATCAGATTACATTTTTCGG 57.070 29.630 13.52 1.67 40.68 4.30
35 36 9.320352 TCGATAAATCAGATTACATTTTTCGGA 57.680 29.630 13.52 3.29 40.68 4.55
36 37 9.586150 CGATAAATCAGATTACATTTTTCGGAG 57.414 33.333 0.00 0.00 38.60 4.63
73 74 7.529880 AAAAAGATGCTGCACATTTATAAGC 57.470 32.000 3.57 0.00 39.84 3.09
74 75 5.840243 AAGATGCTGCACATTTATAAGCA 57.160 34.783 3.57 0.00 46.95 3.91
77 78 4.310357 TGCTGCACATTTATAAGCATGG 57.690 40.909 0.00 0.00 38.88 3.66
78 79 3.700539 TGCTGCACATTTATAAGCATGGT 59.299 39.130 0.00 0.00 38.88 3.55
79 80 4.046462 GCTGCACATTTATAAGCATGGTG 58.954 43.478 0.00 0.00 36.28 4.17
80 81 4.613944 CTGCACATTTATAAGCATGGTGG 58.386 43.478 0.00 0.00 36.28 4.61
81 82 3.384146 TGCACATTTATAAGCATGGTGGG 59.616 43.478 0.00 0.00 31.05 4.61
82 83 3.384467 GCACATTTATAAGCATGGTGGGT 59.616 43.478 0.00 0.00 0.00 4.51
83 84 4.582656 GCACATTTATAAGCATGGTGGGTA 59.417 41.667 0.00 0.00 0.00 3.69
84 85 5.243730 GCACATTTATAAGCATGGTGGGTAT 59.756 40.000 0.00 0.00 0.00 2.73
85 86 6.432783 GCACATTTATAAGCATGGTGGGTATA 59.567 38.462 0.00 0.00 0.00 1.47
86 87 7.122650 GCACATTTATAAGCATGGTGGGTATAT 59.877 37.037 0.00 0.00 0.00 0.86
87 88 9.679661 CACATTTATAAGCATGGTGGGTATATA 57.320 33.333 0.00 0.00 0.00 0.86
88 89 9.905713 ACATTTATAAGCATGGTGGGTATATAG 57.094 33.333 0.00 0.00 0.00 1.31
89 90 9.905713 CATTTATAAGCATGGTGGGTATATAGT 57.094 33.333 0.00 0.00 0.00 2.12
93 94 5.359194 AGCATGGTGGGTATATAGTATGC 57.641 43.478 0.00 0.00 39.79 3.14
94 95 4.119862 GCATGGTGGGTATATAGTATGCG 58.880 47.826 0.00 0.00 31.71 4.73
95 96 4.142026 GCATGGTGGGTATATAGTATGCGA 60.142 45.833 0.00 0.00 31.71 5.10
96 97 5.625886 GCATGGTGGGTATATAGTATGCGAA 60.626 44.000 0.00 0.00 31.71 4.70
97 98 6.403049 CATGGTGGGTATATAGTATGCGAAA 58.597 40.000 0.00 0.00 0.00 3.46
98 99 5.786311 TGGTGGGTATATAGTATGCGAAAC 58.214 41.667 0.00 0.00 0.00 2.78
99 100 4.860907 GGTGGGTATATAGTATGCGAAACG 59.139 45.833 0.00 0.00 0.00 3.60
100 101 5.335897 GGTGGGTATATAGTATGCGAAACGA 60.336 44.000 0.00 0.00 0.00 3.85
101 102 5.570589 GTGGGTATATAGTATGCGAAACGAC 59.429 44.000 0.00 0.00 0.00 4.34
102 103 5.474532 TGGGTATATAGTATGCGAAACGACT 59.525 40.000 0.00 0.00 0.00 4.18
103 104 6.026513 GGGTATATAGTATGCGAAACGACTC 58.973 44.000 0.00 0.00 0.00 3.36
104 105 6.128063 GGGTATATAGTATGCGAAACGACTCT 60.128 42.308 0.00 0.00 0.00 3.24
105 106 7.303998 GGTATATAGTATGCGAAACGACTCTT 58.696 38.462 0.00 0.00 0.00 2.85
106 107 7.806960 GGTATATAGTATGCGAAACGACTCTTT 59.193 37.037 0.00 0.00 0.00 2.52
107 108 7.854934 ATATAGTATGCGAAACGACTCTTTC 57.145 36.000 0.00 0.00 0.00 2.62
116 117 4.787999 GACTCTTTCGCGGTCGAT 57.212 55.556 6.13 0.00 45.04 3.59
117 118 2.568127 GACTCTTTCGCGGTCGATC 58.432 57.895 6.13 0.00 45.04 3.69
118 119 1.194896 GACTCTTTCGCGGTCGATCG 61.195 60.000 15.15 15.15 45.04 3.69
139 140 3.210973 GCAGCGAGCGAATCTTTTC 57.789 52.632 0.00 0.00 0.00 2.29
140 141 0.723981 GCAGCGAGCGAATCTTTTCT 59.276 50.000 0.00 0.00 0.00 2.52
141 142 1.129437 GCAGCGAGCGAATCTTTTCTT 59.871 47.619 0.00 0.00 0.00 2.52
142 143 2.348666 GCAGCGAGCGAATCTTTTCTTA 59.651 45.455 0.00 0.00 0.00 2.10
143 144 3.782574 GCAGCGAGCGAATCTTTTCTTAC 60.783 47.826 0.00 0.00 0.00 2.34
144 145 2.599082 AGCGAGCGAATCTTTTCTTACG 59.401 45.455 0.00 0.00 0.00 3.18
145 146 2.285084 GCGAGCGAATCTTTTCTTACGG 60.285 50.000 0.00 0.00 0.00 4.02
146 147 2.285084 CGAGCGAATCTTTTCTTACGGC 60.285 50.000 0.00 0.00 0.00 5.68
147 148 2.671396 GAGCGAATCTTTTCTTACGGCA 59.329 45.455 0.00 0.00 0.00 5.69
148 149 3.071479 AGCGAATCTTTTCTTACGGCAA 58.929 40.909 0.00 0.00 0.00 4.52
149 150 3.120304 AGCGAATCTTTTCTTACGGCAAC 60.120 43.478 0.00 0.00 0.00 4.17
150 151 3.364565 GCGAATCTTTTCTTACGGCAACA 60.365 43.478 0.00 0.00 0.00 3.33
151 152 4.671766 GCGAATCTTTTCTTACGGCAACAT 60.672 41.667 0.00 0.00 0.00 2.71
152 153 5.022021 CGAATCTTTTCTTACGGCAACATC 58.978 41.667 0.00 0.00 0.00 3.06
153 154 5.390461 CGAATCTTTTCTTACGGCAACATCA 60.390 40.000 0.00 0.00 0.00 3.07
154 155 5.551760 ATCTTTTCTTACGGCAACATCAG 57.448 39.130 0.00 0.00 0.00 2.90
155 156 3.188460 TCTTTTCTTACGGCAACATCAGC 59.812 43.478 0.00 0.00 0.00 4.26
156 157 1.075542 TTCTTACGGCAACATCAGCG 58.924 50.000 0.00 0.00 0.00 5.18
157 158 0.245266 TCTTACGGCAACATCAGCGA 59.755 50.000 0.00 0.00 0.00 4.93
158 159 1.075542 CTTACGGCAACATCAGCGAA 58.924 50.000 0.00 0.00 0.00 4.70
159 160 1.061131 CTTACGGCAACATCAGCGAAG 59.939 52.381 0.00 0.00 0.00 3.79
160 161 0.739462 TACGGCAACATCAGCGAAGG 60.739 55.000 0.00 0.00 0.00 3.46
161 162 1.741401 CGGCAACATCAGCGAAGGA 60.741 57.895 0.00 0.00 0.00 3.36
162 163 1.298157 CGGCAACATCAGCGAAGGAA 61.298 55.000 0.00 0.00 0.00 3.36
163 164 0.449388 GGCAACATCAGCGAAGGAAG 59.551 55.000 0.00 0.00 0.00 3.46
164 165 1.160137 GCAACATCAGCGAAGGAAGT 58.840 50.000 0.00 0.00 0.00 3.01
165 166 2.346803 GCAACATCAGCGAAGGAAGTA 58.653 47.619 0.00 0.00 0.00 2.24
166 167 2.349886 GCAACATCAGCGAAGGAAGTAG 59.650 50.000 0.00 0.00 0.00 2.57
167 168 2.932614 CAACATCAGCGAAGGAAGTAGG 59.067 50.000 0.00 0.00 0.00 3.18
168 169 2.457598 ACATCAGCGAAGGAAGTAGGA 58.542 47.619 0.00 0.00 0.00 2.94
169 170 2.166664 ACATCAGCGAAGGAAGTAGGAC 59.833 50.000 0.00 0.00 0.00 3.85
170 171 1.183549 TCAGCGAAGGAAGTAGGACC 58.816 55.000 0.00 0.00 0.00 4.46
171 172 0.175989 CAGCGAAGGAAGTAGGACCC 59.824 60.000 0.00 0.00 0.00 4.46
172 173 0.252103 AGCGAAGGAAGTAGGACCCA 60.252 55.000 0.00 0.00 0.00 4.51
173 174 0.108281 GCGAAGGAAGTAGGACCCAC 60.108 60.000 0.00 0.00 0.00 4.61
174 175 0.535797 CGAAGGAAGTAGGACCCACC 59.464 60.000 0.00 0.00 39.35 4.61
175 176 1.652947 GAAGGAAGTAGGACCCACCA 58.347 55.000 0.00 0.00 42.04 4.17
176 177 1.555533 GAAGGAAGTAGGACCCACCAG 59.444 57.143 0.00 0.00 42.04 4.00
177 178 0.252742 AGGAAGTAGGACCCACCAGG 60.253 60.000 0.00 0.00 42.04 4.45
190 191 2.512692 CACCAGGTGGGATTGATGAA 57.487 50.000 12.40 0.00 41.15 2.57
191 192 2.094675 CACCAGGTGGGATTGATGAAC 58.905 52.381 12.40 0.00 41.15 3.18
192 193 1.005924 ACCAGGTGGGATTGATGAACC 59.994 52.381 0.04 0.00 41.15 3.62
193 194 1.005805 CCAGGTGGGATTGATGAACCA 59.994 52.381 0.00 0.00 40.01 3.67
194 195 2.557229 CCAGGTGGGATTGATGAACCAA 60.557 50.000 0.00 0.00 40.01 3.67
195 196 2.756760 CAGGTGGGATTGATGAACCAAG 59.243 50.000 0.00 0.00 34.26 3.61
196 197 2.379907 AGGTGGGATTGATGAACCAAGT 59.620 45.455 0.00 0.00 34.26 3.16
197 198 2.755103 GGTGGGATTGATGAACCAAGTC 59.245 50.000 0.00 0.00 34.26 3.01
198 199 3.420893 GTGGGATTGATGAACCAAGTCA 58.579 45.455 0.00 0.00 34.26 3.41
199 200 3.826157 GTGGGATTGATGAACCAAGTCAA 59.174 43.478 0.00 0.00 36.42 3.18
200 201 4.280677 GTGGGATTGATGAACCAAGTCAAA 59.719 41.667 0.00 0.00 35.70 2.69
201 202 4.898265 TGGGATTGATGAACCAAGTCAAAA 59.102 37.500 0.00 0.00 35.70 2.44
202 203 5.010922 TGGGATTGATGAACCAAGTCAAAAG 59.989 40.000 0.00 0.00 35.70 2.27
203 204 5.011023 GGGATTGATGAACCAAGTCAAAAGT 59.989 40.000 0.00 0.00 35.70 2.66
204 205 6.152379 GGATTGATGAACCAAGTCAAAAGTC 58.848 40.000 0.00 0.00 35.70 3.01
205 206 6.015940 GGATTGATGAACCAAGTCAAAAGTCT 60.016 38.462 0.00 0.00 35.70 3.24
206 207 5.756195 TGATGAACCAAGTCAAAAGTCTG 57.244 39.130 0.00 0.00 0.00 3.51
207 208 4.580167 TGATGAACCAAGTCAAAAGTCTGG 59.420 41.667 0.00 0.00 0.00 3.86
208 209 2.687935 TGAACCAAGTCAAAAGTCTGGC 59.312 45.455 0.00 0.00 0.00 4.85
209 210 2.736670 ACCAAGTCAAAAGTCTGGCT 57.263 45.000 0.00 0.00 30.76 4.75
210 211 2.576615 ACCAAGTCAAAAGTCTGGCTC 58.423 47.619 0.00 0.00 28.77 4.70
211 212 1.882623 CCAAGTCAAAAGTCTGGCTCC 59.117 52.381 0.00 0.00 28.77 4.70
212 213 1.532868 CAAGTCAAAAGTCTGGCTCCG 59.467 52.381 0.00 0.00 28.77 4.63
213 214 0.759346 AGTCAAAAGTCTGGCTCCGT 59.241 50.000 0.00 0.00 0.00 4.69
214 215 0.868406 GTCAAAAGTCTGGCTCCGTG 59.132 55.000 0.00 0.00 0.00 4.94
215 216 0.756294 TCAAAAGTCTGGCTCCGTGA 59.244 50.000 0.00 0.00 0.00 4.35
216 217 1.140052 TCAAAAGTCTGGCTCCGTGAA 59.860 47.619 0.00 0.00 0.00 3.18
217 218 1.946768 CAAAAGTCTGGCTCCGTGAAA 59.053 47.619 0.00 0.00 0.00 2.69
218 219 2.554032 CAAAAGTCTGGCTCCGTGAAAT 59.446 45.455 0.00 0.00 0.00 2.17
219 220 2.100605 AAGTCTGGCTCCGTGAAATC 57.899 50.000 0.00 0.00 0.00 2.17
220 221 0.976641 AGTCTGGCTCCGTGAAATCA 59.023 50.000 0.00 0.00 0.00 2.57
221 222 1.066573 AGTCTGGCTCCGTGAAATCAG 60.067 52.381 0.00 0.00 0.00 2.90
222 223 0.976641 TCTGGCTCCGTGAAATCAGT 59.023 50.000 0.00 0.00 0.00 3.41
223 224 1.347707 TCTGGCTCCGTGAAATCAGTT 59.652 47.619 0.00 0.00 0.00 3.16
224 225 1.466167 CTGGCTCCGTGAAATCAGTTG 59.534 52.381 0.00 0.00 0.00 3.16
225 226 1.071542 TGGCTCCGTGAAATCAGTTGA 59.928 47.619 0.00 0.00 0.00 3.18
226 227 2.290260 TGGCTCCGTGAAATCAGTTGAT 60.290 45.455 0.00 0.00 36.07 2.57
227 228 2.096496 GGCTCCGTGAAATCAGTTGATG 59.904 50.000 0.00 0.00 34.49 3.07
228 229 2.096496 GCTCCGTGAAATCAGTTGATGG 59.904 50.000 0.00 0.00 34.49 3.51
229 230 2.679837 CTCCGTGAAATCAGTTGATGGG 59.320 50.000 0.00 0.00 34.49 4.00
230 231 1.745087 CCGTGAAATCAGTTGATGGGG 59.255 52.381 0.00 0.00 34.49 4.96
231 232 1.133025 CGTGAAATCAGTTGATGGGGC 59.867 52.381 0.00 0.00 34.49 5.80
232 233 1.478105 GTGAAATCAGTTGATGGGGCC 59.522 52.381 0.00 0.00 34.49 5.80
233 234 1.114627 GAAATCAGTTGATGGGGCCC 58.885 55.000 18.17 18.17 34.49 5.80
234 235 0.413037 AAATCAGTTGATGGGGCCCA 59.587 50.000 30.97 30.97 38.19 5.36
235 236 0.324645 AATCAGTTGATGGGGCCCAC 60.325 55.000 31.54 21.91 35.80 4.61
236 237 1.217057 ATCAGTTGATGGGGCCCACT 61.217 55.000 31.54 18.36 35.80 4.00
237 238 1.679977 CAGTTGATGGGGCCCACTG 60.680 63.158 31.54 25.89 35.80 3.66
238 239 3.070576 GTTGATGGGGCCCACTGC 61.071 66.667 31.54 20.77 35.80 4.40
247 248 3.009115 GCCCACTGCCTCCTACCA 61.009 66.667 0.00 0.00 0.00 3.25
248 249 2.378634 GCCCACTGCCTCCTACCAT 61.379 63.158 0.00 0.00 0.00 3.55
249 250 1.054406 GCCCACTGCCTCCTACCATA 61.054 60.000 0.00 0.00 0.00 2.74
250 251 1.507140 CCCACTGCCTCCTACCATAA 58.493 55.000 0.00 0.00 0.00 1.90
251 252 1.843851 CCCACTGCCTCCTACCATAAA 59.156 52.381 0.00 0.00 0.00 1.40
252 253 2.443255 CCCACTGCCTCCTACCATAAAT 59.557 50.000 0.00 0.00 0.00 1.40
253 254 3.496870 CCCACTGCCTCCTACCATAAATC 60.497 52.174 0.00 0.00 0.00 2.17
254 255 3.392616 CCACTGCCTCCTACCATAAATCT 59.607 47.826 0.00 0.00 0.00 2.40
255 256 4.503991 CCACTGCCTCCTACCATAAATCTC 60.504 50.000 0.00 0.00 0.00 2.75
256 257 4.346418 CACTGCCTCCTACCATAAATCTCT 59.654 45.833 0.00 0.00 0.00 3.10
257 258 4.591072 ACTGCCTCCTACCATAAATCTCTC 59.409 45.833 0.00 0.00 0.00 3.20
258 259 4.820775 TGCCTCCTACCATAAATCTCTCT 58.179 43.478 0.00 0.00 0.00 3.10
259 260 4.590647 TGCCTCCTACCATAAATCTCTCTG 59.409 45.833 0.00 0.00 0.00 3.35
260 261 4.020662 GCCTCCTACCATAAATCTCTCTGG 60.021 50.000 0.00 0.00 34.84 3.86
261 262 4.020662 CCTCCTACCATAAATCTCTCTGGC 60.021 50.000 0.00 0.00 31.72 4.85
262 263 3.904339 TCCTACCATAAATCTCTCTGGCC 59.096 47.826 0.00 0.00 31.72 5.36
263 264 3.008485 CCTACCATAAATCTCTCTGGCCC 59.992 52.174 0.00 0.00 31.72 5.80
264 265 1.777272 ACCATAAATCTCTCTGGCCCC 59.223 52.381 0.00 0.00 31.72 5.80
265 266 1.271054 CCATAAATCTCTCTGGCCCCG 60.271 57.143 0.00 0.00 0.00 5.73
266 267 1.417890 CATAAATCTCTCTGGCCCCGT 59.582 52.381 0.00 0.00 0.00 5.28
267 268 0.830648 TAAATCTCTCTGGCCCCGTG 59.169 55.000 0.00 0.00 0.00 4.94
268 269 0.909610 AAATCTCTCTGGCCCCGTGA 60.910 55.000 0.00 0.00 0.00 4.35
269 270 0.692419 AATCTCTCTGGCCCCGTGAT 60.692 55.000 0.00 0.00 0.00 3.06
270 271 0.692419 ATCTCTCTGGCCCCGTGATT 60.692 55.000 0.00 0.00 0.00 2.57
271 272 0.909610 TCTCTCTGGCCCCGTGATTT 60.910 55.000 0.00 0.00 0.00 2.17
272 273 0.462759 CTCTCTGGCCCCGTGATTTC 60.463 60.000 0.00 0.00 0.00 2.17
273 274 1.198094 TCTCTGGCCCCGTGATTTCA 61.198 55.000 0.00 0.00 0.00 2.69
274 275 0.322456 CTCTGGCCCCGTGATTTCAA 60.322 55.000 0.00 0.00 0.00 2.69
275 276 0.608035 TCTGGCCCCGTGATTTCAAC 60.608 55.000 0.00 0.00 0.00 3.18
276 277 1.595093 CTGGCCCCGTGATTTCAACC 61.595 60.000 0.00 0.00 0.00 3.77
277 278 2.696759 GGCCCCGTGATTTCAACCG 61.697 63.158 0.00 0.00 0.00 4.44
278 279 1.673009 GCCCCGTGATTTCAACCGA 60.673 57.895 0.00 0.00 0.00 4.69
279 280 1.029947 GCCCCGTGATTTCAACCGAT 61.030 55.000 0.00 0.00 0.00 4.18
280 281 0.732571 CCCCGTGATTTCAACCGATG 59.267 55.000 0.00 0.00 0.00 3.84
281 282 0.732571 CCCGTGATTTCAACCGATGG 59.267 55.000 0.00 0.00 0.00 3.51
282 283 0.732571 CCGTGATTTCAACCGATGGG 59.267 55.000 0.00 0.00 40.11 4.00
283 284 0.732571 CGTGATTTCAACCGATGGGG 59.267 55.000 0.00 0.00 43.62 4.96
284 285 1.102978 GTGATTTCAACCGATGGGGG 58.897 55.000 0.00 0.00 41.60 5.40
301 302 2.822255 GGCCCGCTGCGTCATTTA 60.822 61.111 21.59 0.00 42.61 1.40
302 303 2.403378 GGCCCGCTGCGTCATTTAA 61.403 57.895 21.59 0.00 42.61 1.52
303 304 1.724582 GGCCCGCTGCGTCATTTAAT 61.725 55.000 21.59 0.00 42.61 1.40
304 305 0.100503 GCCCGCTGCGTCATTTAATT 59.899 50.000 21.59 0.00 0.00 1.40
305 306 1.332375 GCCCGCTGCGTCATTTAATTA 59.668 47.619 21.59 0.00 0.00 1.40
306 307 2.223386 GCCCGCTGCGTCATTTAATTAA 60.223 45.455 21.59 0.00 0.00 1.40
307 308 3.359654 CCCGCTGCGTCATTTAATTAAC 58.640 45.455 21.59 0.00 0.00 2.01
308 309 3.359654 CCGCTGCGTCATTTAATTAACC 58.640 45.455 21.59 0.00 0.00 2.85
309 310 3.359654 CGCTGCGTCATTTAATTAACCC 58.640 45.455 14.93 0.00 0.00 4.11
310 311 3.064820 CGCTGCGTCATTTAATTAACCCT 59.935 43.478 14.93 0.00 0.00 4.34
311 312 4.598062 GCTGCGTCATTTAATTAACCCTC 58.402 43.478 0.00 0.00 0.00 4.30
312 313 4.095782 GCTGCGTCATTTAATTAACCCTCA 59.904 41.667 0.00 0.00 0.00 3.86
313 314 5.554822 TGCGTCATTTAATTAACCCTCAC 57.445 39.130 0.00 0.00 0.00 3.51
314 315 4.396790 TGCGTCATTTAATTAACCCTCACC 59.603 41.667 0.00 0.00 0.00 4.02
315 316 4.201980 GCGTCATTTAATTAACCCTCACCC 60.202 45.833 0.00 0.00 0.00 4.61
316 317 4.944930 CGTCATTTAATTAACCCTCACCCA 59.055 41.667 0.00 0.00 0.00 4.51
317 318 5.065988 CGTCATTTAATTAACCCTCACCCAG 59.934 44.000 0.00 0.00 0.00 4.45
318 319 6.184789 GTCATTTAATTAACCCTCACCCAGA 58.815 40.000 0.00 0.00 0.00 3.86
319 320 6.833933 GTCATTTAATTAACCCTCACCCAGAT 59.166 38.462 0.00 0.00 0.00 2.90
320 321 7.342026 GTCATTTAATTAACCCTCACCCAGATT 59.658 37.037 0.00 0.00 0.00 2.40
321 322 7.898636 TCATTTAATTAACCCTCACCCAGATTT 59.101 33.333 0.00 0.00 0.00 2.17
322 323 7.475137 TTTAATTAACCCTCACCCAGATTTG 57.525 36.000 0.00 0.00 0.00 2.32
323 324 4.675063 ATTAACCCTCACCCAGATTTGT 57.325 40.909 0.00 0.00 0.00 2.83
324 325 4.463050 TTAACCCTCACCCAGATTTGTT 57.537 40.909 0.00 0.00 0.00 2.83
325 326 3.328535 AACCCTCACCCAGATTTGTTT 57.671 42.857 0.00 0.00 0.00 2.83
326 327 4.463050 AACCCTCACCCAGATTTGTTTA 57.537 40.909 0.00 0.00 0.00 2.01
327 328 4.463050 ACCCTCACCCAGATTTGTTTAA 57.537 40.909 0.00 0.00 0.00 1.52
328 329 4.407365 ACCCTCACCCAGATTTGTTTAAG 58.593 43.478 0.00 0.00 0.00 1.85
329 330 3.763897 CCCTCACCCAGATTTGTTTAAGG 59.236 47.826 0.00 0.00 0.00 2.69
330 331 4.508405 CCCTCACCCAGATTTGTTTAAGGA 60.508 45.833 0.00 0.00 0.00 3.36
331 332 5.076873 CCTCACCCAGATTTGTTTAAGGAA 58.923 41.667 0.00 0.00 0.00 3.36
332 333 5.538433 CCTCACCCAGATTTGTTTAAGGAAA 59.462 40.000 0.00 0.00 0.00 3.13
333 334 6.399639 TCACCCAGATTTGTTTAAGGAAAC 57.600 37.500 0.00 0.00 44.48 2.78
334 335 6.133356 TCACCCAGATTTGTTTAAGGAAACT 58.867 36.000 2.56 0.00 44.52 2.66
351 352 7.321745 AGGAAACTTGACTTTGTTTAGACTG 57.678 36.000 0.00 0.00 37.44 3.51
352 353 5.971792 GGAAACTTGACTTTGTTTAGACTGC 59.028 40.000 0.00 0.00 36.64 4.40
353 354 6.183360 GGAAACTTGACTTTGTTTAGACTGCT 60.183 38.462 0.00 0.00 36.64 4.24
354 355 5.741388 ACTTGACTTTGTTTAGACTGCTG 57.259 39.130 0.00 0.00 0.00 4.41
355 356 5.186198 ACTTGACTTTGTTTAGACTGCTGT 58.814 37.500 0.00 0.00 0.00 4.40
356 357 5.294552 ACTTGACTTTGTTTAGACTGCTGTC 59.705 40.000 15.36 15.36 43.22 3.51
357 358 4.127171 TGACTTTGTTTAGACTGCTGTCC 58.873 43.478 18.96 5.57 43.91 4.02
358 359 3.131396 ACTTTGTTTAGACTGCTGTCCG 58.869 45.455 18.96 2.34 43.91 4.79
359 360 3.181469 ACTTTGTTTAGACTGCTGTCCGA 60.181 43.478 18.96 6.03 43.91 4.55
360 361 3.462483 TTGTTTAGACTGCTGTCCGAA 57.538 42.857 18.96 11.46 43.91 4.30
361 362 3.462483 TGTTTAGACTGCTGTCCGAAA 57.538 42.857 18.96 16.07 43.91 3.46
362 363 4.002906 TGTTTAGACTGCTGTCCGAAAT 57.997 40.909 18.96 4.12 43.91 2.17
363 364 4.385825 TGTTTAGACTGCTGTCCGAAATT 58.614 39.130 18.96 3.44 43.91 1.82
364 365 4.213270 TGTTTAGACTGCTGTCCGAAATTG 59.787 41.667 18.96 0.00 43.91 2.32
365 366 1.813513 AGACTGCTGTCCGAAATTGG 58.186 50.000 18.96 0.00 43.91 3.16
366 367 0.804989 GACTGCTGTCCGAAATTGGG 59.195 55.000 12.42 0.00 37.24 4.12
367 368 1.244019 ACTGCTGTCCGAAATTGGGC 61.244 55.000 0.00 0.00 0.00 5.36
368 369 2.257286 CTGCTGTCCGAAATTGGGCG 62.257 60.000 0.00 0.00 35.99 6.13
369 370 2.332654 GCTGTCCGAAATTGGGCGT 61.333 57.895 0.00 0.00 35.99 5.68
370 371 1.862602 GCTGTCCGAAATTGGGCGTT 61.863 55.000 0.00 0.00 35.99 4.84
371 372 0.109781 CTGTCCGAAATTGGGCGTTG 60.110 55.000 0.00 0.00 35.99 4.10
372 373 1.211709 GTCCGAAATTGGGCGTTGG 59.788 57.895 0.00 0.00 0.00 3.77
373 374 1.073373 TCCGAAATTGGGCGTTGGA 59.927 52.632 0.00 0.00 0.00 3.53
374 375 0.537600 TCCGAAATTGGGCGTTGGAA 60.538 50.000 0.00 0.00 0.00 3.53
375 376 0.388006 CCGAAATTGGGCGTTGGAAC 60.388 55.000 0.00 0.00 0.00 3.62
376 377 0.312416 CGAAATTGGGCGTTGGAACA 59.688 50.000 0.00 0.00 0.00 3.18
396 397 3.363875 CGCGCGCGGAATAGATAG 58.636 61.111 43.28 13.53 35.56 2.08
397 398 1.442184 CGCGCGCGGAATAGATAGT 60.442 57.895 43.28 0.00 35.56 2.12
398 399 0.179207 CGCGCGCGGAATAGATAGTA 60.179 55.000 43.28 0.00 35.56 1.82
399 400 1.531264 CGCGCGCGGAATAGATAGTAT 60.531 52.381 43.28 0.00 35.56 2.12
400 401 1.846782 GCGCGCGGAATAGATAGTATG 59.153 52.381 33.06 0.00 0.00 2.39
401 402 2.477357 GCGCGCGGAATAGATAGTATGA 60.477 50.000 33.06 0.00 0.00 2.15
402 403 3.754955 CGCGCGGAATAGATAGTATGAA 58.245 45.455 24.84 0.00 0.00 2.57
403 404 4.163552 CGCGCGGAATAGATAGTATGAAA 58.836 43.478 24.84 0.00 0.00 2.69
404 405 4.619760 CGCGCGGAATAGATAGTATGAAAA 59.380 41.667 24.84 0.00 0.00 2.29
405 406 5.118050 CGCGCGGAATAGATAGTATGAAAAA 59.882 40.000 24.84 0.00 0.00 1.94
406 407 6.297353 GCGCGGAATAGATAGTATGAAAAAC 58.703 40.000 8.83 0.00 0.00 2.43
407 408 6.617953 GCGCGGAATAGATAGTATGAAAAACC 60.618 42.308 8.83 0.00 0.00 3.27
408 409 6.422701 CGCGGAATAGATAGTATGAAAAACCA 59.577 38.462 0.00 0.00 0.00 3.67
409 410 7.359264 CGCGGAATAGATAGTATGAAAAACCAG 60.359 40.741 0.00 0.00 0.00 4.00
410 411 7.095187 GCGGAATAGATAGTATGAAAAACCAGG 60.095 40.741 0.00 0.00 0.00 4.45
411 412 7.387948 CGGAATAGATAGTATGAAAAACCAGGG 59.612 40.741 0.00 0.00 0.00 4.45
412 413 7.175119 GGAATAGATAGTATGAAAAACCAGGGC 59.825 40.741 0.00 0.00 0.00 5.19
413 414 4.793201 AGATAGTATGAAAAACCAGGGCC 58.207 43.478 0.00 0.00 0.00 5.80
414 415 2.990740 AGTATGAAAAACCAGGGCCA 57.009 45.000 6.18 0.00 0.00 5.36
415 416 3.252554 AGTATGAAAAACCAGGGCCAA 57.747 42.857 6.18 0.00 0.00 4.52
416 417 3.790126 AGTATGAAAAACCAGGGCCAAT 58.210 40.909 6.18 0.00 0.00 3.16
417 418 4.941713 AGTATGAAAAACCAGGGCCAATA 58.058 39.130 6.18 0.00 0.00 1.90
418 419 5.528337 AGTATGAAAAACCAGGGCCAATAT 58.472 37.500 6.18 0.00 0.00 1.28
419 420 4.758773 ATGAAAAACCAGGGCCAATATG 57.241 40.909 6.18 0.00 0.00 1.78
420 421 2.836981 TGAAAAACCAGGGCCAATATGG 59.163 45.455 6.18 7.22 41.55 2.74
422 423 3.767309 AAAACCAGGGCCAATATGGTA 57.233 42.857 14.90 0.00 46.56 3.25
423 424 3.767309 AAACCAGGGCCAATATGGTAA 57.233 42.857 14.90 0.00 46.56 2.85
424 425 2.748209 ACCAGGGCCAATATGGTAAC 57.252 50.000 13.14 0.00 45.44 2.50
442 443 7.889873 TGGTAACAGAAAAATGAAAGGAGAA 57.110 32.000 0.00 0.00 46.17 2.87
443 444 8.299990 TGGTAACAGAAAAATGAAAGGAGAAA 57.700 30.769 0.00 0.00 46.17 2.52
444 445 8.194769 TGGTAACAGAAAAATGAAAGGAGAAAC 58.805 33.333 0.00 0.00 46.17 2.78
445 446 8.194769 GGTAACAGAAAAATGAAAGGAGAAACA 58.805 33.333 0.00 0.00 0.00 2.83
446 447 9.237846 GTAACAGAAAAATGAAAGGAGAAACAG 57.762 33.333 0.00 0.00 0.00 3.16
447 448 7.645058 ACAGAAAAATGAAAGGAGAAACAGA 57.355 32.000 0.00 0.00 0.00 3.41
448 449 7.710896 ACAGAAAAATGAAAGGAGAAACAGAG 58.289 34.615 0.00 0.00 0.00 3.35
449 450 7.144000 CAGAAAAATGAAAGGAGAAACAGAGG 58.856 38.462 0.00 0.00 0.00 3.69
450 451 6.266330 AGAAAAATGAAAGGAGAAACAGAGGG 59.734 38.462 0.00 0.00 0.00 4.30
451 452 5.324832 AAATGAAAGGAGAAACAGAGGGA 57.675 39.130 0.00 0.00 0.00 4.20
452 453 4.566426 ATGAAAGGAGAAACAGAGGGAG 57.434 45.455 0.00 0.00 0.00 4.30
453 454 2.639839 TGAAAGGAGAAACAGAGGGAGG 59.360 50.000 0.00 0.00 0.00 4.30
454 455 2.723530 AAGGAGAAACAGAGGGAGGA 57.276 50.000 0.00 0.00 0.00 3.71
455 456 2.246091 AGGAGAAACAGAGGGAGGAG 57.754 55.000 0.00 0.00 0.00 3.69
456 457 1.719378 AGGAGAAACAGAGGGAGGAGA 59.281 52.381 0.00 0.00 0.00 3.71
457 458 2.317594 AGGAGAAACAGAGGGAGGAGAT 59.682 50.000 0.00 0.00 0.00 2.75
458 459 3.111484 GGAGAAACAGAGGGAGGAGATT 58.889 50.000 0.00 0.00 0.00 2.40
459 460 3.521531 GGAGAAACAGAGGGAGGAGATTT 59.478 47.826 0.00 0.00 0.00 2.17
460 461 4.512484 GAGAAACAGAGGGAGGAGATTTG 58.488 47.826 0.00 0.00 0.00 2.32
461 462 3.265479 AGAAACAGAGGGAGGAGATTTGG 59.735 47.826 0.00 0.00 0.00 3.28
462 463 0.915364 ACAGAGGGAGGAGATTTGGC 59.085 55.000 0.00 0.00 0.00 4.52
463 464 0.182299 CAGAGGGAGGAGATTTGGCC 59.818 60.000 0.00 0.00 0.00 5.36
464 465 0.253347 AGAGGGAGGAGATTTGGCCA 60.253 55.000 0.00 0.00 0.00 5.36
465 466 0.106967 GAGGGAGGAGATTTGGCCAC 60.107 60.000 3.88 0.00 0.00 5.01
466 467 0.846427 AGGGAGGAGATTTGGCCACA 60.846 55.000 3.88 0.00 0.00 4.17
467 468 0.394899 GGGAGGAGATTTGGCCACAG 60.395 60.000 3.88 0.00 0.00 3.66
472 473 1.815003 GGAGATTTGGCCACAGACTTG 59.185 52.381 3.88 0.00 0.00 3.16
479 480 4.722700 CCACAGACTTGGCCGGGG 62.723 72.222 2.18 0.00 0.00 5.73
480 481 3.953775 CACAGACTTGGCCGGGGT 61.954 66.667 2.18 0.00 0.00 4.95
488 489 2.435120 CTTGGCCGGGGTTTTAGGGT 62.435 60.000 2.18 0.00 0.00 4.34
493 494 1.494716 CCGGGGTTTTAGGGTGGAGT 61.495 60.000 0.00 0.00 0.00 3.85
494 495 0.322187 CGGGGTTTTAGGGTGGAGTG 60.322 60.000 0.00 0.00 0.00 3.51
498 501 1.987368 GGTTTTAGGGTGGAGTGGGTA 59.013 52.381 0.00 0.00 0.00 3.69
501 504 0.043637 TTAGGGTGGAGTGGGTAGGG 59.956 60.000 0.00 0.00 0.00 3.53
506 509 2.040779 GGAGTGGGTAGGGAGGGG 60.041 72.222 0.00 0.00 0.00 4.79
507 510 2.785703 GAGTGGGTAGGGAGGGGT 59.214 66.667 0.00 0.00 0.00 4.95
510 513 4.033251 TGGGTAGGGAGGGGTGGG 62.033 72.222 0.00 0.00 0.00 4.61
514 517 1.770518 GTAGGGAGGGGTGGGGATG 60.771 68.421 0.00 0.00 0.00 3.51
529 532 1.271817 GGGATGCATCTCATTCCCCTC 60.272 57.143 25.28 5.28 43.89 4.30
540 543 1.494716 ATTCCCCTCCCGTTCCGTTT 61.495 55.000 0.00 0.00 0.00 3.60
541 544 2.359478 CCCCTCCCGTTCCGTTTG 60.359 66.667 0.00 0.00 0.00 2.93
542 545 2.359478 CCCTCCCGTTCCGTTTGG 60.359 66.667 0.00 0.00 0.00 3.28
570 579 1.032794 GGCAGGTTATAAAGCCAGGC 58.967 55.000 1.84 1.84 46.26 4.85
590 599 3.459965 CTGCTCCTCCTCTGCGCT 61.460 66.667 9.73 0.00 0.00 5.92
611 620 1.446272 CCGCGACCTTTGACTCCTC 60.446 63.158 8.23 0.00 0.00 3.71
613 622 1.878656 CGCGACCTTTGACTCCTCCT 61.879 60.000 0.00 0.00 0.00 3.69
615 624 0.247736 CGACCTTTGACTCCTCCTGG 59.752 60.000 0.00 0.00 0.00 4.45
616 625 1.353091 GACCTTTGACTCCTCCTGGT 58.647 55.000 0.00 0.00 34.23 4.00
617 626 2.537143 GACCTTTGACTCCTCCTGGTA 58.463 52.381 0.00 0.00 34.23 3.25
618 627 2.234168 GACCTTTGACTCCTCCTGGTAC 59.766 54.545 0.00 0.00 34.23 3.34
619 628 1.555533 CCTTTGACTCCTCCTGGTACC 59.444 57.143 4.43 4.43 34.23 3.34
620 629 2.257207 CTTTGACTCCTCCTGGTACCA 58.743 52.381 15.39 15.39 34.23 3.25
694 728 1.612442 GTCTACCCTCTGCCCACCA 60.612 63.158 0.00 0.00 0.00 4.17
701 735 1.681666 CTCTGCCCACCACATCACT 59.318 57.895 0.00 0.00 0.00 3.41
745 781 1.379176 CCTGACTCGCTCCTCTCCA 60.379 63.158 0.00 0.00 0.00 3.86
753 790 1.760480 GCTCCTCTCCACCCTCCTC 60.760 68.421 0.00 0.00 0.00 3.71
764 801 3.068691 CCTCCTCACCGAGCGGAA 61.069 66.667 16.83 2.36 38.96 4.30
767 804 1.595993 CTCCTCACCGAGCGGAAGAA 61.596 60.000 16.83 0.00 38.96 2.52
777 816 0.899019 AGCGGAAGAAGAGGAGGTTC 59.101 55.000 0.00 0.00 0.00 3.62
794 835 2.043227 GTTCCTCTTCCCGATCCATCT 58.957 52.381 0.00 0.00 0.00 2.90
795 836 2.002505 TCCTCTTCCCGATCCATCTC 57.997 55.000 0.00 0.00 0.00 2.75
796 837 0.972883 CCTCTTCCCGATCCATCTCC 59.027 60.000 0.00 0.00 0.00 3.71
797 838 0.600557 CTCTTCCCGATCCATCTCCG 59.399 60.000 0.00 0.00 0.00 4.63
833 874 3.423154 GGCGCCGGTTTGTCTCTG 61.423 66.667 12.58 0.00 0.00 3.35
839 886 1.947456 GCCGGTTTGTCTCTGTTCTTT 59.053 47.619 1.90 0.00 0.00 2.52
855 902 6.594159 TCTGTTCTTTCGTGTCTTTTTCTCTT 59.406 34.615 0.00 0.00 0.00 2.85
870 917 3.266510 TCTCTTGATTGATGGGGTTCG 57.733 47.619 0.00 0.00 0.00 3.95
874 921 2.107950 TGATTGATGGGGTTCGTGTC 57.892 50.000 0.00 0.00 0.00 3.67
875 922 1.628340 TGATTGATGGGGTTCGTGTCT 59.372 47.619 0.00 0.00 0.00 3.41
891 944 3.300590 CGTGTCTTTTGTTTGCAGTTCAC 59.699 43.478 0.00 0.00 0.00 3.18
892 945 3.300590 GTGTCTTTTGTTTGCAGTTCACG 59.699 43.478 0.00 0.00 0.00 4.35
893 946 2.278875 GTCTTTTGTTTGCAGTTCACGC 59.721 45.455 0.00 0.00 0.00 5.34
1025 1081 1.132643 GAGATCCGCGTCTGTAAGTGT 59.867 52.381 4.92 0.00 33.76 3.55
1054 1130 1.534175 CGATCTCTTTTCTCGGACGGG 60.534 57.143 0.00 0.00 0.00 5.28
1072 1151 2.588201 GGGAGGGGAGATGGATCGC 61.588 68.421 0.00 0.00 0.00 4.58
1083 1162 0.322277 ATGGATCGCAGATGGATGGC 60.322 55.000 0.00 0.00 45.12 4.40
1084 1163 1.374190 GGATCGCAGATGGATGGCT 59.626 57.895 0.00 0.00 45.12 4.75
1086 1165 0.954449 GATCGCAGATGGATGGCTGG 60.954 60.000 0.00 0.00 45.12 4.85
1087 1166 3.285215 CGCAGATGGATGGCTGGC 61.285 66.667 0.00 0.00 32.83 4.85
1152 1231 2.409870 CCATTGCCTTCTCCGTGCC 61.410 63.158 0.00 0.00 0.00 5.01
1159 1238 3.883744 CTTCTCCGTGCCTGCCGTT 62.884 63.158 0.00 0.00 0.00 4.44
1171 1250 0.322098 CTGCCGTTGGTGGATTGGTA 60.322 55.000 0.00 0.00 0.00 3.25
1207 1304 2.027625 CGAGTGGCGTTGGTCCTTC 61.028 63.158 0.00 0.00 34.64 3.46
1215 1312 2.852075 TTGGTCCTTCCTGCGGGT 60.852 61.111 12.43 0.00 37.07 5.28
1256 1355 3.781307 TGATCCGCCCTTCACCCG 61.781 66.667 0.00 0.00 0.00 5.28
1286 1385 2.101415 TCAGAGGTGGATAGAATGTGCG 59.899 50.000 0.00 0.00 0.00 5.34
1294 1393 3.699538 TGGATAGAATGTGCGTACTGAGT 59.300 43.478 4.97 0.00 0.00 3.41
1299 1398 5.073311 AGAATGTGCGTACTGAGTTGTAT 57.927 39.130 4.97 0.00 0.00 2.29
1300 1399 5.479306 AGAATGTGCGTACTGAGTTGTATT 58.521 37.500 4.97 0.00 0.00 1.89
1301 1400 5.577164 AGAATGTGCGTACTGAGTTGTATTC 59.423 40.000 4.97 3.37 0.00 1.75
1302 1401 4.514781 TGTGCGTACTGAGTTGTATTCT 57.485 40.909 4.97 0.00 0.00 2.40
1303 1402 4.234574 TGTGCGTACTGAGTTGTATTCTG 58.765 43.478 4.97 0.00 0.00 3.02
1314 1413 5.036117 AGTTGTATTCTGTTGTGTCCTGT 57.964 39.130 0.00 0.00 0.00 4.00
1332 1431 1.004560 TCTGTCCTCTTGCCTTGCG 60.005 57.895 0.00 0.00 0.00 4.85
1333 1432 1.302033 CTGTCCTCTTGCCTTGCGT 60.302 57.895 0.00 0.00 0.00 5.24
1334 1433 1.572085 CTGTCCTCTTGCCTTGCGTG 61.572 60.000 0.00 0.00 0.00 5.34
1335 1434 1.598130 GTCCTCTTGCCTTGCGTGT 60.598 57.895 0.00 0.00 0.00 4.49
1338 1437 3.259425 CTCTTGCCTTGCGTGTGCC 62.259 63.158 0.00 0.00 41.78 5.01
1339 1438 3.594775 CTTGCCTTGCGTGTGCCA 61.595 61.111 0.00 0.00 41.78 4.92
1340 1439 3.829272 CTTGCCTTGCGTGTGCCAC 62.829 63.158 0.00 0.00 41.78 5.01
1342 1441 4.629115 GCCTTGCGTGTGCCACAC 62.629 66.667 17.99 17.99 45.26 3.82
1344 1443 3.208383 CTTGCGTGTGCCACACCA 61.208 61.111 21.57 16.83 45.93 4.17
1345 1444 2.751837 TTGCGTGTGCCACACCAA 60.752 55.556 21.57 21.03 45.93 3.67
1346 1445 2.276863 CTTGCGTGTGCCACACCAAA 62.277 55.000 21.57 14.56 45.93 3.28
1347 1446 1.670949 TTGCGTGTGCCACACCAAAT 61.671 50.000 21.57 0.00 45.93 2.32
1348 1447 1.661197 GCGTGTGCCACACCAAATG 60.661 57.895 21.57 8.75 45.93 2.32
1349 1448 1.661197 CGTGTGCCACACCAAATGC 60.661 57.895 21.57 0.00 45.93 3.56
1351 1450 1.457267 TGTGCCACACCAAATGCCT 60.457 52.632 0.00 0.00 32.73 4.75
1352 1451 1.005867 GTGCCACACCAAATGCCTG 60.006 57.895 0.00 0.00 0.00 4.85
1353 1452 2.047939 GCCACACCAAATGCCTGC 60.048 61.111 0.00 0.00 0.00 4.85
1354 1453 2.576832 GCCACACCAAATGCCTGCT 61.577 57.895 0.00 0.00 0.00 4.24
1355 1454 2.051941 CCACACCAAATGCCTGCTT 58.948 52.632 0.00 0.00 0.00 3.91
1356 1455 0.320073 CCACACCAAATGCCTGCTTG 60.320 55.000 0.00 0.00 0.00 4.01
1357 1456 0.390124 CACACCAAATGCCTGCTTGT 59.610 50.000 0.00 0.00 0.00 3.16
1358 1457 0.390124 ACACCAAATGCCTGCTTGTG 59.610 50.000 0.00 0.00 0.00 3.33
1374 1494 1.153429 GTGTCCACCCACGATAGCC 60.153 63.158 0.00 0.00 42.67 3.93
1387 1508 3.499918 CACGATAGCCAATTCAGGAATCC 59.500 47.826 0.00 0.00 42.67 3.01
1389 1510 2.638480 TAGCCAATTCAGGAATCCGG 57.362 50.000 0.00 0.00 0.00 5.14
1417 1538 1.928503 GATGTTGCGCATTTGGGAATG 59.071 47.619 12.75 0.00 44.42 2.67
1457 1579 4.381505 GGTTTATACATGTGTTTGCAGGGG 60.382 45.833 9.11 0.00 0.00 4.79
1529 1651 1.075659 GGCTTTGCTGGAGGGTTCT 59.924 57.895 0.00 0.00 0.00 3.01
1533 1655 2.089980 CTTTGCTGGAGGGTTCTGATG 58.910 52.381 0.00 0.00 0.00 3.07
1536 1658 0.463474 GCTGGAGGGTTCTGATGCTC 60.463 60.000 0.00 0.00 0.00 4.26
1551 1673 3.184379 TGATGCTCGTGAGAAAAAGTTCG 59.816 43.478 0.00 0.00 41.32 3.95
1646 1768 0.749091 TAGCATGTGCCTGATGCCAC 60.749 55.000 0.57 0.00 46.24 5.01
1700 1822 2.874701 GGAGTGAAATGATACTGCGCAT 59.125 45.455 12.24 3.79 0.00 4.73
1779 1902 4.138487 ACAGGGGACATAAACGAAGATC 57.862 45.455 0.00 0.00 0.00 2.75
1815 1938 2.552743 GGCTTTGTTGGAGGTGTTCTAC 59.447 50.000 0.00 0.00 0.00 2.59
1822 1949 2.585330 TGGAGGTGTTCTACGTGTACA 58.415 47.619 0.00 0.00 0.00 2.90
1826 1953 4.413087 GAGGTGTTCTACGTGTACAGATG 58.587 47.826 0.00 0.00 0.00 2.90
1833 1960 2.812358 ACGTGTACAGATGCTTGTGA 57.188 45.000 0.00 0.00 32.56 3.58
1842 1969 5.179045 ACAGATGCTTGTGAGAAAAAGTG 57.821 39.130 3.58 0.00 0.00 3.16
1881 2008 3.819368 TGATTTTGTTCTCTGTGAGGCA 58.181 40.909 0.00 0.00 0.00 4.75
1887 2014 3.554934 TGTTCTCTGTGAGGCATTGTTT 58.445 40.909 0.00 0.00 0.00 2.83
1893 2020 1.340889 TGTGAGGCATTGTTTTGCTCC 59.659 47.619 0.00 0.00 42.38 4.70
1915 2042 2.319136 TTGTGTTACCTTGCGTGTCT 57.681 45.000 0.00 0.00 0.00 3.41
1920 2047 0.753867 TTACCTTGCGTGTCTGTGGA 59.246 50.000 0.00 0.00 0.00 4.02
1956 2083 1.871772 CCTGCTTGCAACTCTTCGG 59.128 57.895 0.00 0.00 0.00 4.30
1975 2102 2.293122 CGGTTCACATGTTCCATGTTGT 59.707 45.455 7.11 0.00 0.00 3.32
2025 2152 5.829233 AATATGCGAATACACGATGACTG 57.171 39.130 0.00 0.00 35.09 3.51
2026 2153 2.647529 TGCGAATACACGATGACTGT 57.352 45.000 0.00 0.00 35.09 3.55
2031 2158 3.002051 CGAATACACGATGACTGTTGACG 60.002 47.826 0.00 0.00 35.09 4.35
2084 2212 4.290942 TCAAGCCCTTTTGGTTTTCCTAA 58.709 39.130 0.00 0.00 34.97 2.69
2085 2213 4.904853 TCAAGCCCTTTTGGTTTTCCTAAT 59.095 37.500 0.00 0.00 34.97 1.73
2086 2214 6.078664 TCAAGCCCTTTTGGTTTTCCTAATA 58.921 36.000 0.00 0.00 34.97 0.98
2158 2286 2.475466 GGCATCGACCGTCTACCGA 61.475 63.158 0.00 0.00 39.56 4.69
2161 2289 1.078214 ATCGACCGTCTACCGACCA 60.078 57.895 0.00 0.00 39.56 4.02
2269 2397 1.923356 ATTCATTTGCGGACAAGGGT 58.077 45.000 0.00 0.00 37.04 4.34
2457 2585 4.996062 TGTATGCTTATGACATGATGCG 57.004 40.909 0.00 0.00 0.00 4.73
2672 2803 4.704833 CCATCCTATGGGCGCGGG 62.705 72.222 8.83 0.00 46.86 6.13
2790 2921 4.875544 TGCATCAGCGACCTTTTATTAC 57.124 40.909 0.00 0.00 46.23 1.89
2810 2941 2.288395 ACTATGCTGGTTTTGCAAGTGC 60.288 45.455 0.00 0.00 44.01 4.40
2912 3043 4.350245 ACACACTGAACTATACTAGGCCA 58.650 43.478 5.01 0.00 0.00 5.36
3018 3149 4.069304 TGTATACTGCAGGTTGGTGTTTC 58.931 43.478 19.93 0.00 0.00 2.78
3122 3253 2.478894 CCAAGTTATTGTCGAGCACGTT 59.521 45.455 2.86 0.00 35.90 3.99
3189 3320 6.949117 ATCCAGGTAATATGAAGCTCTGAT 57.051 37.500 0.00 0.00 0.00 2.90
3259 3390 5.952526 ACCTGTTTATGTCCCTTTTTACG 57.047 39.130 0.00 0.00 0.00 3.18
3261 3392 4.380128 CCTGTTTATGTCCCTTTTTACGCC 60.380 45.833 0.00 0.00 0.00 5.68
3280 3411 1.968540 GCTGTGTCTTGGGAGCACC 60.969 63.158 0.00 0.00 40.81 5.01
3456 3588 5.812642 ACACTATGTTAGTACAGATTGCAGC 59.187 40.000 0.00 0.00 37.77 5.25
3469 3601 4.022935 CAGATTGCAGCTAACCAGTTGAAA 60.023 41.667 0.00 0.00 35.24 2.69
3470 3602 4.768968 AGATTGCAGCTAACCAGTTGAAAT 59.231 37.500 0.00 0.00 42.32 2.17
3487 3619 9.736023 CAGTTGAAATAATTTACTATCTTGGGC 57.264 33.333 0.00 0.00 0.00 5.36
3496 3628 8.879427 AATTTACTATCTTGGGCAAAGTTACT 57.121 30.769 0.67 0.00 37.18 2.24
3497 3629 8.879427 ATTTACTATCTTGGGCAAAGTTACTT 57.121 30.769 0.67 0.00 37.18 2.24
3517 3656 1.939974 TGCCTTACGATGAGATGCAC 58.060 50.000 0.00 0.00 0.00 4.57
3565 3704 7.890515 TGTGTTAATTCAGAATATTGCCAACA 58.109 30.769 0.00 0.00 0.00 3.33
3576 3715 9.970395 CAGAATATTGCCAACATTATGTATTGT 57.030 29.630 0.00 0.00 0.00 2.71
3584 3723 8.933807 TGCCAACATTATGTATTGTTTGAAATG 58.066 29.630 0.00 0.00 33.93 2.32
3585 3724 9.149225 GCCAACATTATGTATTGTTTGAAATGA 57.851 29.630 0.00 0.00 33.93 2.57
3628 3767 5.411361 TGGATGTACTATGCACAACAGTTTC 59.589 40.000 0.00 0.00 0.00 2.78
3674 3813 7.175104 TCATAAAAGGCTTAAATCTGTCCTGT 58.825 34.615 0.00 0.00 0.00 4.00
3745 3900 7.121611 TGCATCAGTCATTGTTATGTCAGAAAT 59.878 33.333 0.00 0.00 33.34 2.17
3847 4002 2.028294 CAGCAACATCACAGGAGAGACT 60.028 50.000 0.00 0.00 0.00 3.24
3853 4008 1.229336 CACAGGAGAGACTGGGGGT 60.229 63.158 0.00 0.00 42.75 4.95
4006 4161 6.074544 AGGAACGTCTACATAGCTAATGTC 57.925 41.667 10.76 0.25 46.15 3.06
4115 4270 6.925165 CCCCATTATAAGCAACATCACAATTC 59.075 38.462 0.00 0.00 0.00 2.17
4218 4373 1.204704 CAATGTCTCCCTCAGCGTACA 59.795 52.381 0.00 0.00 0.00 2.90
4249 4404 3.340034 TCCGTGGAATTGTTCGCTTATT 58.660 40.909 0.00 0.00 0.00 1.40
4252 4407 4.378978 CCGTGGAATTGTTCGCTTATTCAA 60.379 41.667 0.00 0.00 31.47 2.69
4255 4410 5.007034 TGGAATTGTTCGCTTATTCAAGGA 58.993 37.500 0.00 0.00 31.47 3.36
4300 4455 0.941463 CGTGCGAGCAACTCAGAACT 60.941 55.000 0.00 0.00 0.00 3.01
4479 4637 1.508088 CAAAGGGGCTTGCGTCATC 59.492 57.895 0.00 0.00 0.00 2.92
4720 4887 9.282247 CAATTAGATATGTTCAGTTTTGTGAGC 57.718 33.333 0.00 0.00 0.00 4.26
4744 4911 3.572584 GCTTCCTTCATTGCAAGTTGAG 58.427 45.455 7.16 0.20 0.00 3.02
4792 4976 7.773690 AGGAAACTCACTTTTAGCAAGTAAAGA 59.226 33.333 0.00 0.00 32.90 2.52
4793 4977 8.568794 GGAAACTCACTTTTAGCAAGTAAAGAT 58.431 33.333 0.00 0.00 35.75 2.40
4841 5025 6.387465 ACATATTCAATGATTGCTGCTATGC 58.613 36.000 0.32 0.00 0.00 3.14
4887 5071 3.905784 CTGAAATGCAGGAGGAAACAAC 58.094 45.455 0.00 0.00 41.07 3.32
4888 5072 2.627699 TGAAATGCAGGAGGAAACAACC 59.372 45.455 0.00 0.00 0.00 3.77
4889 5073 2.380064 AATGCAGGAGGAAACAACCA 57.620 45.000 0.00 0.00 0.00 3.67
4890 5074 2.380064 ATGCAGGAGGAAACAACCAA 57.620 45.000 0.00 0.00 0.00 3.67
4891 5075 2.151502 TGCAGGAGGAAACAACCAAA 57.848 45.000 0.00 0.00 0.00 3.28
4892 5076 2.461695 TGCAGGAGGAAACAACCAAAA 58.538 42.857 0.00 0.00 0.00 2.44
4893 5077 2.834549 TGCAGGAGGAAACAACCAAAAA 59.165 40.909 0.00 0.00 0.00 1.94
4894 5078 3.194861 GCAGGAGGAAACAACCAAAAAC 58.805 45.455 0.00 0.00 0.00 2.43
4895 5079 3.368948 GCAGGAGGAAACAACCAAAAACA 60.369 43.478 0.00 0.00 0.00 2.83
4896 5080 4.683129 GCAGGAGGAAACAACCAAAAACAT 60.683 41.667 0.00 0.00 0.00 2.71
4897 5081 4.810491 CAGGAGGAAACAACCAAAAACATG 59.190 41.667 0.00 0.00 0.00 3.21
4898 5082 4.126437 GGAGGAAACAACCAAAAACATGG 58.874 43.478 0.00 0.00 46.38 3.66
4914 5098 4.046286 ACATGGGATGGCTAGAAAAACA 57.954 40.909 0.00 0.00 33.60 2.83
4919 5103 5.826643 TGGGATGGCTAGAAAAACAGTATT 58.173 37.500 0.00 0.00 0.00 1.89
4925 5109 9.162764 GATGGCTAGAAAAACAGTATTCAGTTA 57.837 33.333 0.00 0.00 0.00 2.24
4937 5121 9.672673 AACAGTATTCAGTTATTTCTGCTATGT 57.327 29.630 0.00 0.00 35.63 2.29
5001 5211 4.437682 TGAAGGCCTTATTATCACCAGG 57.562 45.455 20.54 0.00 0.00 4.45
5008 5218 5.705905 GGCCTTATTATCACCAGGAATGTAC 59.294 44.000 0.00 0.00 0.00 2.90
5044 5268 5.435291 AGATCAAATGAAGGAGCAAGGTAG 58.565 41.667 0.00 0.00 0.00 3.18
5049 5273 4.744795 ATGAAGGAGCAAGGTAGTACTG 57.255 45.455 5.39 0.00 0.00 2.74
5053 5277 3.301274 AGGAGCAAGGTAGTACTGATCC 58.699 50.000 15.56 15.56 0.00 3.36
5300 5527 0.883814 GCAGAGCTCCATTCCCATCG 60.884 60.000 10.93 0.00 0.00 3.84
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.597369 TGTAATCTGATTTATCGAATGGGTACG 59.403 37.037 8.38 0.00 0.00 3.67
1 2 8.827177 TGTAATCTGATTTATCGAATGGGTAC 57.173 34.615 8.38 0.00 0.00 3.34
3 4 8.924511 AATGTAATCTGATTTATCGAATGGGT 57.075 30.769 8.38 0.00 0.00 4.51
8 9 9.929722 CCGAAAAATGTAATCTGATTTATCGAA 57.070 29.630 8.38 0.00 0.00 3.71
9 10 9.320352 TCCGAAAAATGTAATCTGATTTATCGA 57.680 29.630 8.38 0.00 0.00 3.59
10 11 9.586150 CTCCGAAAAATGTAATCTGATTTATCG 57.414 33.333 8.38 8.17 0.00 2.92
13 14 8.600625 CGTCTCCGAAAAATGTAATCTGATTTA 58.399 33.333 8.38 0.00 35.63 1.40
14 15 7.464358 CGTCTCCGAAAAATGTAATCTGATTT 58.536 34.615 8.38 0.00 35.63 2.17
15 16 6.456988 GCGTCTCCGAAAAATGTAATCTGATT 60.457 38.462 8.14 8.14 35.63 2.57
16 17 5.006746 GCGTCTCCGAAAAATGTAATCTGAT 59.993 40.000 0.00 0.00 35.63 2.90
17 18 4.328983 GCGTCTCCGAAAAATGTAATCTGA 59.671 41.667 0.00 0.00 35.63 3.27
18 19 4.494199 GGCGTCTCCGAAAAATGTAATCTG 60.494 45.833 0.00 0.00 35.63 2.90
19 20 3.621715 GGCGTCTCCGAAAAATGTAATCT 59.378 43.478 0.00 0.00 35.63 2.40
20 21 3.242641 GGGCGTCTCCGAAAAATGTAATC 60.243 47.826 0.00 0.00 35.63 1.75
21 22 2.681344 GGGCGTCTCCGAAAAATGTAAT 59.319 45.455 0.00 0.00 35.63 1.89
22 23 2.078392 GGGCGTCTCCGAAAAATGTAA 58.922 47.619 0.00 0.00 35.63 2.41
23 24 1.729284 GGGCGTCTCCGAAAAATGTA 58.271 50.000 0.00 0.00 35.63 2.29
24 25 2.551644 GGGCGTCTCCGAAAAATGT 58.448 52.632 0.00 0.00 35.63 2.71
49 50 7.098477 TGCTTATAAATGTGCAGCATCTTTTT 58.902 30.769 0.00 0.00 35.56 1.94
50 51 6.632909 TGCTTATAAATGTGCAGCATCTTTT 58.367 32.000 0.00 6.28 35.56 2.27
51 52 6.211587 TGCTTATAAATGTGCAGCATCTTT 57.788 33.333 0.00 4.38 35.56 2.52
52 53 5.840243 TGCTTATAAATGTGCAGCATCTT 57.160 34.783 0.00 0.00 35.56 2.40
53 54 5.278808 CCATGCTTATAAATGTGCAGCATCT 60.279 40.000 0.00 0.00 46.00 2.90
54 55 4.921515 CCATGCTTATAAATGTGCAGCATC 59.078 41.667 0.00 0.00 46.00 3.91
56 57 3.700539 ACCATGCTTATAAATGTGCAGCA 59.299 39.130 0.00 0.00 44.32 4.41
57 58 4.046462 CACCATGCTTATAAATGTGCAGC 58.954 43.478 3.84 0.00 38.87 5.25
58 59 4.500205 CCCACCATGCTTATAAATGTGCAG 60.500 45.833 3.84 0.00 38.87 4.41
59 60 3.384146 CCCACCATGCTTATAAATGTGCA 59.616 43.478 0.20 0.20 39.83 4.57
60 61 3.384467 ACCCACCATGCTTATAAATGTGC 59.616 43.478 0.00 0.00 0.00 4.57
61 62 6.899393 ATACCCACCATGCTTATAAATGTG 57.101 37.500 0.00 0.00 0.00 3.21
62 63 9.905713 CTATATACCCACCATGCTTATAAATGT 57.094 33.333 0.00 0.00 0.00 2.71
63 64 9.905713 ACTATATACCCACCATGCTTATAAATG 57.094 33.333 0.00 0.00 0.00 2.32
67 68 8.647796 GCATACTATATACCCACCATGCTTATA 58.352 37.037 0.00 0.00 35.73 0.98
68 69 7.509546 GCATACTATATACCCACCATGCTTAT 58.490 38.462 0.00 0.00 35.73 1.73
69 70 6.406512 CGCATACTATATACCCACCATGCTTA 60.407 42.308 0.00 0.00 36.31 3.09
70 71 5.626809 CGCATACTATATACCCACCATGCTT 60.627 44.000 0.00 0.00 36.31 3.91
71 72 4.141937 CGCATACTATATACCCACCATGCT 60.142 45.833 0.00 0.00 36.31 3.79
72 73 4.119862 CGCATACTATATACCCACCATGC 58.880 47.826 0.00 0.00 35.37 4.06
73 74 5.592104 TCGCATACTATATACCCACCATG 57.408 43.478 0.00 0.00 0.00 3.66
74 75 6.403878 GTTTCGCATACTATATACCCACCAT 58.596 40.000 0.00 0.00 0.00 3.55
75 76 5.565242 CGTTTCGCATACTATATACCCACCA 60.565 44.000 0.00 0.00 0.00 4.17
76 77 4.860907 CGTTTCGCATACTATATACCCACC 59.139 45.833 0.00 0.00 0.00 4.61
77 78 5.570589 GTCGTTTCGCATACTATATACCCAC 59.429 44.000 0.00 0.00 0.00 4.61
78 79 5.474532 AGTCGTTTCGCATACTATATACCCA 59.525 40.000 0.00 0.00 0.00 4.51
79 80 5.947443 AGTCGTTTCGCATACTATATACCC 58.053 41.667 0.00 0.00 0.00 3.69
80 81 6.840075 AGAGTCGTTTCGCATACTATATACC 58.160 40.000 0.00 0.00 0.00 2.73
81 82 8.725212 AAAGAGTCGTTTCGCATACTATATAC 57.275 34.615 0.00 0.00 0.00 1.47
82 83 8.945758 GAAAGAGTCGTTTCGCATACTATATA 57.054 34.615 0.00 0.00 0.00 0.86
83 84 7.854934 GAAAGAGTCGTTTCGCATACTATAT 57.145 36.000 0.00 0.00 0.00 0.86
118 119 1.975363 AAAGATTCGCTCGCTGCAGC 61.975 55.000 29.12 29.12 43.06 5.25
119 120 0.445436 AAAAGATTCGCTCGCTGCAG 59.555 50.000 10.11 10.11 43.06 4.41
120 121 0.443869 GAAAAGATTCGCTCGCTGCA 59.556 50.000 0.00 0.00 43.06 4.41
121 122 0.723981 AGAAAAGATTCGCTCGCTGC 59.276 50.000 0.00 0.00 40.63 5.25
122 123 3.540359 CGTAAGAAAAGATTCGCTCGCTG 60.540 47.826 0.00 0.00 40.63 5.18
123 124 2.599082 CGTAAGAAAAGATTCGCTCGCT 59.401 45.455 0.00 0.00 40.63 4.93
124 125 2.285084 CCGTAAGAAAAGATTCGCTCGC 60.285 50.000 0.00 0.00 40.63 5.03
125 126 2.285084 GCCGTAAGAAAAGATTCGCTCG 60.285 50.000 0.00 0.00 40.63 5.03
126 127 2.671396 TGCCGTAAGAAAAGATTCGCTC 59.329 45.455 0.00 0.00 40.63 5.03
127 128 2.695359 TGCCGTAAGAAAAGATTCGCT 58.305 42.857 0.00 0.00 40.63 4.93
128 129 3.161306 GTTGCCGTAAGAAAAGATTCGC 58.839 45.455 0.00 0.00 40.63 4.70
129 130 4.398549 TGTTGCCGTAAGAAAAGATTCG 57.601 40.909 0.00 0.00 40.63 3.34
130 131 5.938322 TGATGTTGCCGTAAGAAAAGATTC 58.062 37.500 0.00 0.00 43.02 2.52
131 132 5.619981 GCTGATGTTGCCGTAAGAAAAGATT 60.620 40.000 0.00 0.00 43.02 2.40
132 133 4.142600 GCTGATGTTGCCGTAAGAAAAGAT 60.143 41.667 0.00 0.00 43.02 2.40
133 134 3.188460 GCTGATGTTGCCGTAAGAAAAGA 59.812 43.478 0.00 0.00 43.02 2.52
134 135 3.492313 GCTGATGTTGCCGTAAGAAAAG 58.508 45.455 0.00 0.00 43.02 2.27
135 136 2.095969 CGCTGATGTTGCCGTAAGAAAA 60.096 45.455 0.00 0.00 43.02 2.29
136 137 1.463056 CGCTGATGTTGCCGTAAGAAA 59.537 47.619 0.00 0.00 43.02 2.52
137 138 1.075542 CGCTGATGTTGCCGTAAGAA 58.924 50.000 0.00 0.00 43.02 2.52
138 139 0.245266 TCGCTGATGTTGCCGTAAGA 59.755 50.000 0.00 0.00 43.02 2.10
139 140 1.061131 CTTCGCTGATGTTGCCGTAAG 59.939 52.381 0.00 0.00 0.00 2.34
140 141 1.075542 CTTCGCTGATGTTGCCGTAA 58.924 50.000 0.00 0.00 0.00 3.18
141 142 0.739462 CCTTCGCTGATGTTGCCGTA 60.739 55.000 0.00 0.00 0.00 4.02
142 143 2.034879 CCTTCGCTGATGTTGCCGT 61.035 57.895 0.00 0.00 0.00 5.68
143 144 1.298157 TTCCTTCGCTGATGTTGCCG 61.298 55.000 0.00 0.00 0.00 5.69
144 145 0.449388 CTTCCTTCGCTGATGTTGCC 59.551 55.000 0.00 0.00 0.00 4.52
145 146 1.160137 ACTTCCTTCGCTGATGTTGC 58.840 50.000 0.00 0.00 0.00 4.17
146 147 2.932614 CCTACTTCCTTCGCTGATGTTG 59.067 50.000 0.00 0.00 0.00 3.33
147 148 2.832129 TCCTACTTCCTTCGCTGATGTT 59.168 45.455 0.00 0.00 0.00 2.71
148 149 2.166664 GTCCTACTTCCTTCGCTGATGT 59.833 50.000 0.00 0.00 0.00 3.06
149 150 2.482142 GGTCCTACTTCCTTCGCTGATG 60.482 54.545 0.00 0.00 0.00 3.07
150 151 1.757699 GGTCCTACTTCCTTCGCTGAT 59.242 52.381 0.00 0.00 0.00 2.90
151 152 1.183549 GGTCCTACTTCCTTCGCTGA 58.816 55.000 0.00 0.00 0.00 4.26
152 153 0.175989 GGGTCCTACTTCCTTCGCTG 59.824 60.000 0.00 0.00 0.00 5.18
153 154 0.252103 TGGGTCCTACTTCCTTCGCT 60.252 55.000 0.00 0.00 0.00 4.93
154 155 0.108281 GTGGGTCCTACTTCCTTCGC 60.108 60.000 0.00 0.00 0.00 4.70
155 156 0.535797 GGTGGGTCCTACTTCCTTCG 59.464 60.000 5.23 0.00 0.00 3.79
156 157 1.555533 CTGGTGGGTCCTACTTCCTTC 59.444 57.143 5.23 0.00 37.07 3.46
157 158 1.657804 CTGGTGGGTCCTACTTCCTT 58.342 55.000 5.23 0.00 37.07 3.36
158 159 0.252742 CCTGGTGGGTCCTACTTCCT 60.253 60.000 5.23 0.00 37.07 3.36
159 160 2.297937 CCTGGTGGGTCCTACTTCC 58.702 63.158 5.23 0.00 37.07 3.46
171 172 2.094675 GTTCATCAATCCCACCTGGTG 58.905 52.381 20.01 20.01 34.77 4.17
172 173 1.005924 GGTTCATCAATCCCACCTGGT 59.994 52.381 0.00 0.00 34.77 4.00
173 174 1.005805 TGGTTCATCAATCCCACCTGG 59.994 52.381 0.00 0.00 0.00 4.45
174 175 2.512692 TGGTTCATCAATCCCACCTG 57.487 50.000 0.00 0.00 0.00 4.00
175 176 2.379907 ACTTGGTTCATCAATCCCACCT 59.620 45.455 0.00 0.00 0.00 4.00
176 177 2.755103 GACTTGGTTCATCAATCCCACC 59.245 50.000 0.00 0.00 0.00 4.61
177 178 3.420893 TGACTTGGTTCATCAATCCCAC 58.579 45.455 0.00 0.00 0.00 4.61
178 179 3.805066 TGACTTGGTTCATCAATCCCA 57.195 42.857 0.00 0.00 0.00 4.37
179 180 5.011023 ACTTTTGACTTGGTTCATCAATCCC 59.989 40.000 0.00 0.00 32.61 3.85
180 181 6.015940 AGACTTTTGACTTGGTTCATCAATCC 60.016 38.462 0.00 0.00 32.61 3.01
181 182 6.860023 CAGACTTTTGACTTGGTTCATCAATC 59.140 38.462 0.00 0.00 32.61 2.67
182 183 6.239120 CCAGACTTTTGACTTGGTTCATCAAT 60.239 38.462 0.00 0.00 32.61 2.57
183 184 5.067674 CCAGACTTTTGACTTGGTTCATCAA 59.932 40.000 0.00 0.00 0.00 2.57
184 185 4.580167 CCAGACTTTTGACTTGGTTCATCA 59.420 41.667 0.00 0.00 0.00 3.07
185 186 4.557496 GCCAGACTTTTGACTTGGTTCATC 60.557 45.833 0.00 0.00 0.00 2.92
186 187 3.319122 GCCAGACTTTTGACTTGGTTCAT 59.681 43.478 0.00 0.00 0.00 2.57
187 188 2.687935 GCCAGACTTTTGACTTGGTTCA 59.312 45.455 0.00 0.00 0.00 3.18
188 189 2.952310 AGCCAGACTTTTGACTTGGTTC 59.048 45.455 0.00 0.00 0.00 3.62
189 190 2.952310 GAGCCAGACTTTTGACTTGGTT 59.048 45.455 0.00 0.00 0.00 3.67
190 191 2.576615 GAGCCAGACTTTTGACTTGGT 58.423 47.619 0.00 0.00 0.00 3.67
191 192 1.882623 GGAGCCAGACTTTTGACTTGG 59.117 52.381 0.00 0.00 0.00 3.61
192 193 1.532868 CGGAGCCAGACTTTTGACTTG 59.467 52.381 0.00 0.00 0.00 3.16
193 194 1.141053 ACGGAGCCAGACTTTTGACTT 59.859 47.619 0.00 0.00 0.00 3.01
194 195 0.759346 ACGGAGCCAGACTTTTGACT 59.241 50.000 0.00 0.00 0.00 3.41
195 196 0.868406 CACGGAGCCAGACTTTTGAC 59.132 55.000 0.00 0.00 0.00 3.18
196 197 0.756294 TCACGGAGCCAGACTTTTGA 59.244 50.000 0.00 0.00 0.00 2.69
197 198 1.593196 TTCACGGAGCCAGACTTTTG 58.407 50.000 0.00 0.00 0.00 2.44
198 199 2.341846 TTTCACGGAGCCAGACTTTT 57.658 45.000 0.00 0.00 0.00 2.27
199 200 2.224523 TGATTTCACGGAGCCAGACTTT 60.225 45.455 0.00 0.00 0.00 2.66
200 201 1.347707 TGATTTCACGGAGCCAGACTT 59.652 47.619 0.00 0.00 0.00 3.01
201 202 0.976641 TGATTTCACGGAGCCAGACT 59.023 50.000 0.00 0.00 0.00 3.24
202 203 1.338200 ACTGATTTCACGGAGCCAGAC 60.338 52.381 0.00 0.00 0.00 3.51
203 204 0.976641 ACTGATTTCACGGAGCCAGA 59.023 50.000 0.00 0.00 0.00 3.86
204 205 1.466167 CAACTGATTTCACGGAGCCAG 59.534 52.381 0.00 0.00 0.00 4.85
205 206 1.071542 TCAACTGATTTCACGGAGCCA 59.928 47.619 0.00 0.00 0.00 4.75
206 207 1.808411 TCAACTGATTTCACGGAGCC 58.192 50.000 0.00 0.00 0.00 4.70
207 208 2.096496 CCATCAACTGATTTCACGGAGC 59.904 50.000 0.00 0.00 31.21 4.70
208 209 2.679837 CCCATCAACTGATTTCACGGAG 59.320 50.000 0.00 0.00 31.21 4.63
209 210 2.617788 CCCCATCAACTGATTTCACGGA 60.618 50.000 0.00 0.00 31.21 4.69
210 211 1.745087 CCCCATCAACTGATTTCACGG 59.255 52.381 0.00 0.00 31.21 4.94
211 212 1.133025 GCCCCATCAACTGATTTCACG 59.867 52.381 0.00 0.00 31.21 4.35
212 213 1.478105 GGCCCCATCAACTGATTTCAC 59.522 52.381 0.00 0.00 31.21 3.18
213 214 1.619432 GGGCCCCATCAACTGATTTCA 60.619 52.381 12.23 0.00 31.21 2.69
214 215 1.114627 GGGCCCCATCAACTGATTTC 58.885 55.000 12.23 0.00 31.21 2.17
215 216 0.413037 TGGGCCCCATCAACTGATTT 59.587 50.000 22.27 0.00 31.21 2.17
216 217 0.324645 GTGGGCCCCATCAACTGATT 60.325 55.000 22.27 0.00 35.28 2.57
217 218 1.217057 AGTGGGCCCCATCAACTGAT 61.217 55.000 22.27 0.00 35.28 2.90
218 219 1.852157 AGTGGGCCCCATCAACTGA 60.852 57.895 22.27 0.00 35.28 3.41
219 220 1.679977 CAGTGGGCCCCATCAACTG 60.680 63.158 22.27 21.63 35.28 3.16
220 221 2.765969 CAGTGGGCCCCATCAACT 59.234 61.111 22.27 13.27 35.28 3.16
221 222 3.070576 GCAGTGGGCCCCATCAAC 61.071 66.667 22.27 10.69 35.28 3.18
230 231 1.054406 TATGGTAGGAGGCAGTGGGC 61.054 60.000 0.00 0.00 43.74 5.36
231 232 1.507140 TTATGGTAGGAGGCAGTGGG 58.493 55.000 0.00 0.00 0.00 4.61
232 233 3.392616 AGATTTATGGTAGGAGGCAGTGG 59.607 47.826 0.00 0.00 0.00 4.00
233 234 4.346418 AGAGATTTATGGTAGGAGGCAGTG 59.654 45.833 0.00 0.00 0.00 3.66
234 235 4.561752 AGAGATTTATGGTAGGAGGCAGT 58.438 43.478 0.00 0.00 0.00 4.40
235 236 4.837860 AGAGAGATTTATGGTAGGAGGCAG 59.162 45.833 0.00 0.00 0.00 4.85
236 237 4.590647 CAGAGAGATTTATGGTAGGAGGCA 59.409 45.833 0.00 0.00 0.00 4.75
237 238 4.020662 CCAGAGAGATTTATGGTAGGAGGC 60.021 50.000 0.00 0.00 0.00 4.70
238 239 4.020662 GCCAGAGAGATTTATGGTAGGAGG 60.021 50.000 0.00 0.00 35.17 4.30
239 240 4.020662 GGCCAGAGAGATTTATGGTAGGAG 60.021 50.000 0.00 0.00 35.17 3.69
240 241 3.904339 GGCCAGAGAGATTTATGGTAGGA 59.096 47.826 0.00 0.00 35.17 2.94
241 242 3.008485 GGGCCAGAGAGATTTATGGTAGG 59.992 52.174 4.39 0.00 35.17 3.18
242 243 3.008485 GGGGCCAGAGAGATTTATGGTAG 59.992 52.174 4.39 0.00 35.17 3.18
243 244 2.979678 GGGGCCAGAGAGATTTATGGTA 59.020 50.000 4.39 0.00 35.17 3.25
244 245 1.777272 GGGGCCAGAGAGATTTATGGT 59.223 52.381 4.39 0.00 35.17 3.55
245 246 1.271054 CGGGGCCAGAGAGATTTATGG 60.271 57.143 4.39 0.00 35.84 2.74
246 247 1.417890 ACGGGGCCAGAGAGATTTATG 59.582 52.381 11.67 0.00 0.00 1.90
247 248 1.417890 CACGGGGCCAGAGAGATTTAT 59.582 52.381 11.67 0.00 0.00 1.40
248 249 0.830648 CACGGGGCCAGAGAGATTTA 59.169 55.000 11.67 0.00 0.00 1.40
249 250 0.909610 TCACGGGGCCAGAGAGATTT 60.910 55.000 11.67 0.00 0.00 2.17
250 251 0.692419 ATCACGGGGCCAGAGAGATT 60.692 55.000 11.67 0.00 0.00 2.40
251 252 0.692419 AATCACGGGGCCAGAGAGAT 60.692 55.000 11.67 7.85 0.00 2.75
252 253 0.909610 AAATCACGGGGCCAGAGAGA 60.910 55.000 11.67 5.70 0.00 3.10
253 254 0.462759 GAAATCACGGGGCCAGAGAG 60.463 60.000 11.67 0.00 0.00 3.20
254 255 1.198094 TGAAATCACGGGGCCAGAGA 61.198 55.000 11.67 8.74 0.00 3.10
255 256 0.322456 TTGAAATCACGGGGCCAGAG 60.322 55.000 11.67 1.89 0.00 3.35
256 257 0.608035 GTTGAAATCACGGGGCCAGA 60.608 55.000 11.67 2.40 0.00 3.86
257 258 1.595093 GGTTGAAATCACGGGGCCAG 61.595 60.000 4.39 3.10 0.00 4.85
258 259 1.605165 GGTTGAAATCACGGGGCCA 60.605 57.895 4.39 0.00 0.00 5.36
259 260 2.696759 CGGTTGAAATCACGGGGCC 61.697 63.158 0.00 0.00 0.00 5.80
260 261 1.029947 ATCGGTTGAAATCACGGGGC 61.030 55.000 0.00 0.00 0.00 5.80
261 262 0.732571 CATCGGTTGAAATCACGGGG 59.267 55.000 0.00 0.00 0.00 5.73
262 263 0.732571 CCATCGGTTGAAATCACGGG 59.267 55.000 0.00 0.00 0.00 5.28
263 264 0.732571 CCCATCGGTTGAAATCACGG 59.267 55.000 0.00 0.00 0.00 4.94
264 265 0.732571 CCCCATCGGTTGAAATCACG 59.267 55.000 0.00 0.00 0.00 4.35
265 266 1.102978 CCCCCATCGGTTGAAATCAC 58.897 55.000 0.00 0.00 0.00 3.06
266 267 3.586843 CCCCCATCGGTTGAAATCA 57.413 52.632 0.00 0.00 0.00 2.57
284 285 1.724582 ATTAAATGACGCAGCGGGCC 61.725 55.000 21.15 8.44 40.31 5.80
285 286 0.100503 AATTAAATGACGCAGCGGGC 59.899 50.000 21.15 11.42 39.90 6.13
286 287 3.359654 GTTAATTAAATGACGCAGCGGG 58.640 45.455 21.15 0.00 0.00 6.13
287 288 3.359654 GGTTAATTAAATGACGCAGCGG 58.640 45.455 21.15 0.70 0.00 5.52
288 289 3.064820 AGGGTTAATTAAATGACGCAGCG 59.935 43.478 14.82 14.82 0.00 5.18
289 290 4.095782 TGAGGGTTAATTAAATGACGCAGC 59.904 41.667 0.00 0.00 0.00 5.25
290 291 5.448632 GGTGAGGGTTAATTAAATGACGCAG 60.449 44.000 0.00 0.00 0.00 5.18
291 292 4.396790 GGTGAGGGTTAATTAAATGACGCA 59.603 41.667 0.00 0.00 0.00 5.24
292 293 4.201980 GGGTGAGGGTTAATTAAATGACGC 60.202 45.833 0.00 0.00 0.00 5.19
293 294 4.944930 TGGGTGAGGGTTAATTAAATGACG 59.055 41.667 0.00 0.00 0.00 4.35
294 295 6.184789 TCTGGGTGAGGGTTAATTAAATGAC 58.815 40.000 0.00 0.00 0.00 3.06
295 296 6.395780 TCTGGGTGAGGGTTAATTAAATGA 57.604 37.500 0.00 0.00 0.00 2.57
296 297 7.660030 AATCTGGGTGAGGGTTAATTAAATG 57.340 36.000 0.00 0.00 0.00 2.32
297 298 7.678171 ACAAATCTGGGTGAGGGTTAATTAAAT 59.322 33.333 0.00 0.00 0.00 1.40
298 299 7.013834 ACAAATCTGGGTGAGGGTTAATTAAA 58.986 34.615 0.00 0.00 0.00 1.52
299 300 6.557568 ACAAATCTGGGTGAGGGTTAATTAA 58.442 36.000 0.00 0.00 0.00 1.40
300 301 6.147437 ACAAATCTGGGTGAGGGTTAATTA 57.853 37.500 0.00 0.00 0.00 1.40
301 302 5.010708 ACAAATCTGGGTGAGGGTTAATT 57.989 39.130 0.00 0.00 0.00 1.40
302 303 4.675063 ACAAATCTGGGTGAGGGTTAAT 57.325 40.909 0.00 0.00 0.00 1.40
303 304 4.463050 AACAAATCTGGGTGAGGGTTAA 57.537 40.909 0.00 0.00 0.00 2.01
304 305 4.463050 AAACAAATCTGGGTGAGGGTTA 57.537 40.909 0.00 0.00 0.00 2.85
305 306 3.328535 AAACAAATCTGGGTGAGGGTT 57.671 42.857 0.00 0.00 0.00 4.11
306 307 4.407365 CTTAAACAAATCTGGGTGAGGGT 58.593 43.478 0.00 0.00 0.00 4.34
307 308 3.763897 CCTTAAACAAATCTGGGTGAGGG 59.236 47.826 0.00 0.00 0.00 4.30
308 309 4.662278 TCCTTAAACAAATCTGGGTGAGG 58.338 43.478 0.00 0.00 0.00 3.86
309 310 6.265422 AGTTTCCTTAAACAAATCTGGGTGAG 59.735 38.462 4.04 0.00 46.18 3.51
310 311 6.133356 AGTTTCCTTAAACAAATCTGGGTGA 58.867 36.000 4.04 0.00 46.18 4.02
311 312 6.405278 AGTTTCCTTAAACAAATCTGGGTG 57.595 37.500 4.04 0.00 46.18 4.61
312 313 6.609616 TCAAGTTTCCTTAAACAAATCTGGGT 59.390 34.615 4.04 0.00 46.18 4.51
313 314 6.923508 GTCAAGTTTCCTTAAACAAATCTGGG 59.076 38.462 4.04 0.00 46.18 4.45
314 315 7.716612 AGTCAAGTTTCCTTAAACAAATCTGG 58.283 34.615 4.04 0.00 46.18 3.86
315 316 9.586435 AAAGTCAAGTTTCCTTAAACAAATCTG 57.414 29.630 4.04 0.00 46.18 2.90
316 317 9.586435 CAAAGTCAAGTTTCCTTAAACAAATCT 57.414 29.630 4.04 0.00 46.18 2.40
317 318 9.366216 ACAAAGTCAAGTTTCCTTAAACAAATC 57.634 29.630 4.04 0.00 46.18 2.17
318 319 9.719355 AACAAAGTCAAGTTTCCTTAAACAAAT 57.281 25.926 4.04 0.00 46.18 2.32
319 320 9.549078 AAACAAAGTCAAGTTTCCTTAAACAAA 57.451 25.926 4.04 0.00 46.18 2.83
321 322 9.849166 CTAAACAAAGTCAAGTTTCCTTAAACA 57.151 29.630 4.04 0.00 46.18 2.83
324 325 9.457436 AGTCTAAACAAAGTCAAGTTTCCTTAA 57.543 29.630 0.00 0.00 38.71 1.85
325 326 8.889717 CAGTCTAAACAAAGTCAAGTTTCCTTA 58.110 33.333 0.00 0.00 38.71 2.69
326 327 7.628580 GCAGTCTAAACAAAGTCAAGTTTCCTT 60.629 37.037 0.00 0.00 38.71 3.36
327 328 6.183360 GCAGTCTAAACAAAGTCAAGTTTCCT 60.183 38.462 0.00 0.00 38.71 3.36
328 329 5.971792 GCAGTCTAAACAAAGTCAAGTTTCC 59.028 40.000 0.00 0.00 38.71 3.13
329 330 6.688813 CAGCAGTCTAAACAAAGTCAAGTTTC 59.311 38.462 0.00 0.00 38.71 2.78
330 331 6.151144 ACAGCAGTCTAAACAAAGTCAAGTTT 59.849 34.615 0.00 0.00 40.68 2.66
331 332 5.648092 ACAGCAGTCTAAACAAAGTCAAGTT 59.352 36.000 0.00 0.00 0.00 2.66
332 333 5.186198 ACAGCAGTCTAAACAAAGTCAAGT 58.814 37.500 0.00 0.00 0.00 3.16
333 334 5.277538 GGACAGCAGTCTAAACAAAGTCAAG 60.278 44.000 9.29 0.00 44.36 3.02
334 335 4.574828 GGACAGCAGTCTAAACAAAGTCAA 59.425 41.667 9.29 0.00 44.36 3.18
335 336 4.127171 GGACAGCAGTCTAAACAAAGTCA 58.873 43.478 9.29 0.00 44.36 3.41
336 337 3.184581 CGGACAGCAGTCTAAACAAAGTC 59.815 47.826 9.29 0.00 44.36 3.01
337 338 3.131396 CGGACAGCAGTCTAAACAAAGT 58.869 45.455 9.29 0.00 44.36 2.66
338 339 3.390135 TCGGACAGCAGTCTAAACAAAG 58.610 45.455 9.29 0.00 44.36 2.77
339 340 3.462483 TCGGACAGCAGTCTAAACAAA 57.538 42.857 9.29 0.00 44.36 2.83
340 341 3.462483 TTCGGACAGCAGTCTAAACAA 57.538 42.857 9.29 0.00 44.36 2.83
341 342 3.462483 TTTCGGACAGCAGTCTAAACA 57.538 42.857 9.29 0.00 44.36 2.83
342 343 4.378459 CCAATTTCGGACAGCAGTCTAAAC 60.378 45.833 9.29 0.00 44.36 2.01
343 344 3.751175 CCAATTTCGGACAGCAGTCTAAA 59.249 43.478 9.29 10.22 44.36 1.85
344 345 3.334691 CCAATTTCGGACAGCAGTCTAA 58.665 45.455 9.29 1.75 44.36 2.10
345 346 2.354704 CCCAATTTCGGACAGCAGTCTA 60.355 50.000 9.29 0.00 44.36 2.59
346 347 1.611673 CCCAATTTCGGACAGCAGTCT 60.612 52.381 9.29 0.00 44.36 3.24
347 348 0.804989 CCCAATTTCGGACAGCAGTC 59.195 55.000 0.00 0.00 44.21 3.51
348 349 1.244019 GCCCAATTTCGGACAGCAGT 61.244 55.000 0.00 0.00 0.00 4.40
349 350 1.508088 GCCCAATTTCGGACAGCAG 59.492 57.895 0.00 0.00 0.00 4.24
350 351 2.331893 CGCCCAATTTCGGACAGCA 61.332 57.895 0.00 0.00 0.00 4.41
351 352 1.862602 AACGCCCAATTTCGGACAGC 61.863 55.000 0.00 0.00 0.00 4.40
352 353 0.109781 CAACGCCCAATTTCGGACAG 60.110 55.000 0.00 0.00 0.00 3.51
353 354 1.519751 CCAACGCCCAATTTCGGACA 61.520 55.000 0.00 0.00 0.00 4.02
354 355 1.211709 CCAACGCCCAATTTCGGAC 59.788 57.895 0.00 0.00 0.00 4.79
355 356 0.537600 TTCCAACGCCCAATTTCGGA 60.538 50.000 0.00 0.00 0.00 4.55
356 357 0.388006 GTTCCAACGCCCAATTTCGG 60.388 55.000 0.00 0.00 0.00 4.30
357 358 0.312416 TGTTCCAACGCCCAATTTCG 59.688 50.000 0.00 0.00 0.00 3.46
358 359 2.403259 CTTGTTCCAACGCCCAATTTC 58.597 47.619 0.00 0.00 0.00 2.17
359 360 1.540146 GCTTGTTCCAACGCCCAATTT 60.540 47.619 0.00 0.00 0.00 1.82
360 361 0.033366 GCTTGTTCCAACGCCCAATT 59.967 50.000 0.00 0.00 0.00 2.32
361 362 1.665442 GCTTGTTCCAACGCCCAAT 59.335 52.632 0.00 0.00 0.00 3.16
362 363 2.840066 CGCTTGTTCCAACGCCCAA 61.840 57.895 0.00 0.00 0.00 4.12
363 364 3.283684 CGCTTGTTCCAACGCCCA 61.284 61.111 0.00 0.00 0.00 5.36
364 365 4.700365 GCGCTTGTTCCAACGCCC 62.700 66.667 0.00 0.00 45.35 6.13
375 376 4.633596 CTATTCCGCGCGCGCTTG 62.634 66.667 45.97 36.65 39.32 4.01
376 377 2.742710 TATCTATTCCGCGCGCGCTT 62.743 55.000 45.97 31.80 39.32 4.68
377 378 3.263503 TATCTATTCCGCGCGCGCT 62.264 57.895 45.97 32.63 39.32 5.92
378 379 2.778997 CTATCTATTCCGCGCGCGC 61.779 63.158 45.06 42.65 38.24 6.86
379 380 0.179207 TACTATCTATTCCGCGCGCG 60.179 55.000 43.73 43.73 39.44 6.86
380 381 1.846782 CATACTATCTATTCCGCGCGC 59.153 52.381 27.36 23.91 0.00 6.86
381 382 3.400505 TCATACTATCTATTCCGCGCG 57.599 47.619 25.67 25.67 0.00 6.86
382 383 6.297353 GTTTTTCATACTATCTATTCCGCGC 58.703 40.000 0.00 0.00 0.00 6.86
383 384 6.422701 TGGTTTTTCATACTATCTATTCCGCG 59.577 38.462 0.00 0.00 0.00 6.46
384 385 7.095187 CCTGGTTTTTCATACTATCTATTCCGC 60.095 40.741 0.00 0.00 0.00 5.54
385 386 7.387948 CCCTGGTTTTTCATACTATCTATTCCG 59.612 40.741 0.00 0.00 0.00 4.30
386 387 7.175119 GCCCTGGTTTTTCATACTATCTATTCC 59.825 40.741 0.00 0.00 0.00 3.01
387 388 7.175119 GGCCCTGGTTTTTCATACTATCTATTC 59.825 40.741 0.00 0.00 0.00 1.75
388 389 7.004691 GGCCCTGGTTTTTCATACTATCTATT 58.995 38.462 0.00 0.00 0.00 1.73
389 390 6.102615 TGGCCCTGGTTTTTCATACTATCTAT 59.897 38.462 0.00 0.00 0.00 1.98
390 391 5.430417 TGGCCCTGGTTTTTCATACTATCTA 59.570 40.000 0.00 0.00 0.00 1.98
391 392 4.229582 TGGCCCTGGTTTTTCATACTATCT 59.770 41.667 0.00 0.00 0.00 1.98
392 393 4.532834 TGGCCCTGGTTTTTCATACTATC 58.467 43.478 0.00 0.00 0.00 2.08
393 394 4.601406 TGGCCCTGGTTTTTCATACTAT 57.399 40.909 0.00 0.00 0.00 2.12
394 395 4.390129 TTGGCCCTGGTTTTTCATACTA 57.610 40.909 0.00 0.00 0.00 1.82
395 396 2.990740 TGGCCCTGGTTTTTCATACT 57.009 45.000 0.00 0.00 0.00 2.12
396 397 5.453198 CCATATTGGCCCTGGTTTTTCATAC 60.453 44.000 0.00 0.00 0.00 2.39
397 398 4.653341 CCATATTGGCCCTGGTTTTTCATA 59.347 41.667 0.00 0.00 0.00 2.15
398 399 3.455543 CCATATTGGCCCTGGTTTTTCAT 59.544 43.478 0.00 0.00 0.00 2.57
399 400 2.836981 CCATATTGGCCCTGGTTTTTCA 59.163 45.455 0.00 0.00 0.00 2.69
400 401 2.837591 ACCATATTGGCCCTGGTTTTTC 59.162 45.455 0.00 0.00 42.67 2.29
401 402 2.914536 ACCATATTGGCCCTGGTTTTT 58.085 42.857 0.00 0.00 42.67 1.94
402 403 2.640284 ACCATATTGGCCCTGGTTTT 57.360 45.000 0.00 0.00 42.67 2.43
403 404 3.245803 TGTTACCATATTGGCCCTGGTTT 60.246 43.478 18.14 1.72 42.67 3.27
404 405 2.313342 TGTTACCATATTGGCCCTGGTT 59.687 45.455 18.14 6.45 42.67 3.67
405 406 1.926665 TGTTACCATATTGGCCCTGGT 59.073 47.619 17.36 17.36 42.67 4.00
406 407 2.174639 TCTGTTACCATATTGGCCCTGG 59.825 50.000 0.00 4.62 42.67 4.45
407 408 3.576078 TCTGTTACCATATTGGCCCTG 57.424 47.619 0.00 0.00 42.67 4.45
408 409 4.601406 TTTCTGTTACCATATTGGCCCT 57.399 40.909 0.00 0.00 42.67 5.19
409 410 5.669164 TTTTTCTGTTACCATATTGGCCC 57.331 39.130 0.00 0.00 42.67 5.80
410 411 6.872920 TCATTTTTCTGTTACCATATTGGCC 58.127 36.000 0.00 0.00 42.67 5.36
411 412 8.770438 TTTCATTTTTCTGTTACCATATTGGC 57.230 30.769 0.00 0.00 42.67 4.52
412 413 9.369904 CCTTTCATTTTTCTGTTACCATATTGG 57.630 33.333 0.00 0.00 45.02 3.16
415 416 9.753674 TCTCCTTTCATTTTTCTGTTACCATAT 57.246 29.630 0.00 0.00 0.00 1.78
416 417 9.581289 TTCTCCTTTCATTTTTCTGTTACCATA 57.419 29.630 0.00 0.00 0.00 2.74
417 418 8.477419 TTCTCCTTTCATTTTTCTGTTACCAT 57.523 30.769 0.00 0.00 0.00 3.55
418 419 7.889873 TTCTCCTTTCATTTTTCTGTTACCA 57.110 32.000 0.00 0.00 0.00 3.25
419 420 8.194769 TGTTTCTCCTTTCATTTTTCTGTTACC 58.805 33.333 0.00 0.00 0.00 2.85
420 421 9.237846 CTGTTTCTCCTTTCATTTTTCTGTTAC 57.762 33.333 0.00 0.00 0.00 2.50
421 422 9.184523 TCTGTTTCTCCTTTCATTTTTCTGTTA 57.815 29.630 0.00 0.00 0.00 2.41
422 423 8.066612 TCTGTTTCTCCTTTCATTTTTCTGTT 57.933 30.769 0.00 0.00 0.00 3.16
423 424 7.201857 CCTCTGTTTCTCCTTTCATTTTTCTGT 60.202 37.037 0.00 0.00 0.00 3.41
424 425 7.144000 CCTCTGTTTCTCCTTTCATTTTTCTG 58.856 38.462 0.00 0.00 0.00 3.02
425 426 6.266330 CCCTCTGTTTCTCCTTTCATTTTTCT 59.734 38.462 0.00 0.00 0.00 2.52
426 427 6.265422 TCCCTCTGTTTCTCCTTTCATTTTTC 59.735 38.462 0.00 0.00 0.00 2.29
427 428 6.136155 TCCCTCTGTTTCTCCTTTCATTTTT 58.864 36.000 0.00 0.00 0.00 1.94
428 429 5.705400 TCCCTCTGTTTCTCCTTTCATTTT 58.295 37.500 0.00 0.00 0.00 1.82
429 430 5.320277 CTCCCTCTGTTTCTCCTTTCATTT 58.680 41.667 0.00 0.00 0.00 2.32
430 431 4.263683 CCTCCCTCTGTTTCTCCTTTCATT 60.264 45.833 0.00 0.00 0.00 2.57
431 432 3.265479 CCTCCCTCTGTTTCTCCTTTCAT 59.735 47.826 0.00 0.00 0.00 2.57
432 433 2.639839 CCTCCCTCTGTTTCTCCTTTCA 59.360 50.000 0.00 0.00 0.00 2.69
433 434 2.907042 TCCTCCCTCTGTTTCTCCTTTC 59.093 50.000 0.00 0.00 0.00 2.62
434 435 2.909662 CTCCTCCCTCTGTTTCTCCTTT 59.090 50.000 0.00 0.00 0.00 3.11
435 436 2.112691 TCTCCTCCCTCTGTTTCTCCTT 59.887 50.000 0.00 0.00 0.00 3.36
436 437 1.719378 TCTCCTCCCTCTGTTTCTCCT 59.281 52.381 0.00 0.00 0.00 3.69
437 438 2.239681 TCTCCTCCCTCTGTTTCTCC 57.760 55.000 0.00 0.00 0.00 3.71
438 439 4.512484 CAAATCTCCTCCCTCTGTTTCTC 58.488 47.826 0.00 0.00 0.00 2.87
439 440 3.265479 CCAAATCTCCTCCCTCTGTTTCT 59.735 47.826 0.00 0.00 0.00 2.52
440 441 3.615155 CCAAATCTCCTCCCTCTGTTTC 58.385 50.000 0.00 0.00 0.00 2.78
441 442 2.291217 GCCAAATCTCCTCCCTCTGTTT 60.291 50.000 0.00 0.00 0.00 2.83
442 443 1.283321 GCCAAATCTCCTCCCTCTGTT 59.717 52.381 0.00 0.00 0.00 3.16
443 444 0.915364 GCCAAATCTCCTCCCTCTGT 59.085 55.000 0.00 0.00 0.00 3.41
444 445 0.182299 GGCCAAATCTCCTCCCTCTG 59.818 60.000 0.00 0.00 0.00 3.35
445 446 0.253347 TGGCCAAATCTCCTCCCTCT 60.253 55.000 0.61 0.00 0.00 3.69
446 447 0.106967 GTGGCCAAATCTCCTCCCTC 60.107 60.000 7.24 0.00 0.00 4.30
447 448 0.846427 TGTGGCCAAATCTCCTCCCT 60.846 55.000 7.24 0.00 0.00 4.20
448 449 0.394899 CTGTGGCCAAATCTCCTCCC 60.395 60.000 7.24 0.00 0.00 4.30
449 450 0.620556 TCTGTGGCCAAATCTCCTCC 59.379 55.000 7.24 0.00 0.00 4.30
450 451 1.280421 AGTCTGTGGCCAAATCTCCTC 59.720 52.381 7.24 0.00 0.00 3.71
451 452 1.366319 AGTCTGTGGCCAAATCTCCT 58.634 50.000 7.24 0.00 0.00 3.69
452 453 1.815003 CAAGTCTGTGGCCAAATCTCC 59.185 52.381 7.24 0.00 0.00 3.71
453 454 1.815003 CCAAGTCTGTGGCCAAATCTC 59.185 52.381 7.24 0.00 0.00 2.75
454 455 1.915141 CCAAGTCTGTGGCCAAATCT 58.085 50.000 7.24 0.03 0.00 2.40
462 463 4.722700 CCCCGGCCAAGTCTGTGG 62.723 72.222 2.24 0.00 42.05 4.17
463 464 2.976494 AAACCCCGGCCAAGTCTGTG 62.976 60.000 2.24 0.00 0.00 3.66
464 465 2.292785 AAAACCCCGGCCAAGTCTGT 62.293 55.000 2.24 0.00 0.00 3.41
465 466 0.250989 TAAAACCCCGGCCAAGTCTG 60.251 55.000 2.24 0.00 0.00 3.51
466 467 0.037734 CTAAAACCCCGGCCAAGTCT 59.962 55.000 2.24 0.00 0.00 3.24
467 468 0.963856 CCTAAAACCCCGGCCAAGTC 60.964 60.000 2.24 0.00 0.00 3.01
472 473 2.361992 CACCCTAAAACCCCGGCC 60.362 66.667 0.00 0.00 0.00 6.13
476 477 0.039180 CCACTCCACCCTAAAACCCC 59.961 60.000 0.00 0.00 0.00 4.95
479 480 2.026542 CCTACCCACTCCACCCTAAAAC 60.027 54.545 0.00 0.00 0.00 2.43
480 481 2.271777 CCTACCCACTCCACCCTAAAA 58.728 52.381 0.00 0.00 0.00 1.52
488 489 2.784984 CCCTCCCTACCCACTCCA 59.215 66.667 0.00 0.00 0.00 3.86
493 494 4.033251 CCCACCCCTCCCTACCCA 62.033 72.222 0.00 0.00 0.00 4.51
494 495 4.837421 CCCCACCCCTCCCTACCC 62.837 77.778 0.00 0.00 0.00 3.69
501 504 2.061790 GAGATGCATCCCCACCCCTC 62.062 65.000 23.06 7.76 0.00 4.30
506 509 1.613836 GGAATGAGATGCATCCCCAC 58.386 55.000 23.06 12.43 35.78 4.61
510 513 1.271817 GGAGGGGAATGAGATGCATCC 60.272 57.143 23.06 14.63 35.78 3.51
514 517 1.072159 CGGGAGGGGAATGAGATGC 59.928 63.158 0.00 0.00 0.00 3.91
542 545 2.602746 TATAACCTGCCAGCCGCCAC 62.603 60.000 0.00 0.00 36.24 5.01
554 563 2.173569 CAGAGGCCTGGCTTTATAACCT 59.826 50.000 12.00 3.91 36.77 3.50
555 564 2.576615 CAGAGGCCTGGCTTTATAACC 58.423 52.381 12.00 0.00 36.77 2.85
556 565 1.950216 GCAGAGGCCTGGCTTTATAAC 59.050 52.381 12.00 0.00 40.72 1.89
557 566 1.846439 AGCAGAGGCCTGGCTTTATAA 59.154 47.619 20.19 0.00 42.56 0.98
570 579 2.784356 CGCAGAGGAGGAGCAGAGG 61.784 68.421 0.00 0.00 0.00 3.69
590 599 1.959226 GAGTCAAAGGTCGCGGCAA 60.959 57.895 14.93 0.00 0.00 4.52
611 620 2.505982 CCATCCGCTGGTACCAGG 59.494 66.667 36.91 27.10 43.77 4.45
661 676 3.406764 GGTAGACAGGATCCAATCATGC 58.593 50.000 15.82 5.12 44.34 4.06
671 686 0.399233 GGGCAGAGGGTAGACAGGAT 60.399 60.000 0.00 0.00 0.00 3.24
753 790 1.153745 CCTCTTCTTCCGCTCGGTG 60.154 63.158 8.28 3.35 36.47 4.94
777 816 0.972883 GGAGATGGATCGGGAAGAGG 59.027 60.000 0.00 0.00 0.00 3.69
782 823 1.530891 GGACGGAGATGGATCGGGA 60.531 63.158 0.00 0.00 0.00 5.14
783 824 2.920645 CGGACGGAGATGGATCGGG 61.921 68.421 0.00 0.00 0.00 5.14
832 873 6.370442 TCAAGAGAAAAAGACACGAAAGAACA 59.630 34.615 0.00 0.00 0.00 3.18
833 874 6.772078 TCAAGAGAAAAAGACACGAAAGAAC 58.228 36.000 0.00 0.00 0.00 3.01
839 886 6.073058 CCATCAATCAAGAGAAAAAGACACGA 60.073 38.462 0.00 0.00 0.00 4.35
855 902 1.628340 AGACACGAACCCCATCAATCA 59.372 47.619 0.00 0.00 0.00 2.57
870 917 3.300590 CGTGAACTGCAAACAAAAGACAC 59.699 43.478 0.00 0.00 0.00 3.67
874 921 1.587946 GGCGTGAACTGCAAACAAAAG 59.412 47.619 0.00 0.00 0.00 2.27
875 922 1.634702 GGCGTGAACTGCAAACAAAA 58.365 45.000 0.00 0.00 0.00 2.44
919 972 0.180878 AACTCGGGTCCGGTCAAAAA 59.819 50.000 9.68 0.00 40.25 1.94
920 973 1.047002 TAACTCGGGTCCGGTCAAAA 58.953 50.000 9.68 0.00 40.25 2.44
962 1015 1.747444 TCTTCTTCCCCTTCCTTGCT 58.253 50.000 0.00 0.00 0.00 3.91
963 1016 2.240921 AGATCTTCTTCCCCTTCCTTGC 59.759 50.000 0.00 0.00 0.00 4.01
964 1017 3.265479 ACAGATCTTCTTCCCCTTCCTTG 59.735 47.826 0.00 0.00 0.00 3.61
965 1018 3.521531 GACAGATCTTCTTCCCCTTCCTT 59.478 47.826 0.00 0.00 0.00 3.36
1015 1071 3.493334 TCGAGGAAGGAACACTTACAGA 58.507 45.455 0.00 0.00 42.91 3.41
1025 1081 4.142359 CGAGAAAAGAGATCGAGGAAGGAA 60.142 45.833 0.00 0.00 38.72 3.36
1054 1130 2.588201 GCGATCCATCTCCCCTCCC 61.588 68.421 0.00 0.00 0.00 4.30
1072 1151 3.285215 GCGCCAGCCATCCATCTG 61.285 66.667 0.00 0.00 37.42 2.90
1083 1162 2.026945 AAACCAAAACCAGGCGCCAG 62.027 55.000 31.54 22.32 0.00 4.85
1084 1163 1.617947 AAAACCAAAACCAGGCGCCA 61.618 50.000 31.54 0.00 0.00 5.69
1086 1165 1.157257 CCAAAACCAAAACCAGGCGC 61.157 55.000 0.00 0.00 0.00 6.53
1087 1166 0.176910 ACCAAAACCAAAACCAGGCG 59.823 50.000 0.00 0.00 0.00 5.52
1091 1170 0.108138 CGCCACCAAAACCAAAACCA 60.108 50.000 0.00 0.00 0.00 3.67
1092 1171 0.812014 CCGCCACCAAAACCAAAACC 60.812 55.000 0.00 0.00 0.00 3.27
1093 1172 1.433053 GCCGCCACCAAAACCAAAAC 61.433 55.000 0.00 0.00 0.00 2.43
1095 1174 2.501610 GCCGCCACCAAAACCAAA 59.498 55.556 0.00 0.00 0.00 3.28
1096 1175 3.905678 CGCCGCCACCAAAACCAA 61.906 61.111 0.00 0.00 0.00 3.67
1123 1202 2.203351 GCAATGGGGGACGGATCC 60.203 66.667 0.00 0.00 45.42 3.36
1152 1231 0.322098 TACCAATCCACCAACGGCAG 60.322 55.000 0.00 0.00 0.00 4.85
1159 1238 1.555477 GGACCGGTACCAATCCACCA 61.555 60.000 21.56 0.00 34.25 4.17
1256 1355 2.358737 CACCTCTGAACACGGGCC 60.359 66.667 0.00 0.00 0.00 5.80
1260 1359 3.868757 TTCTATCCACCTCTGAACACG 57.131 47.619 0.00 0.00 0.00 4.49
1286 1385 6.145696 GGACACAACAGAATACAACTCAGTAC 59.854 42.308 0.00 0.00 0.00 2.73
1294 1393 5.056480 CAGACAGGACACAACAGAATACAA 58.944 41.667 0.00 0.00 0.00 2.41
1299 1398 2.158957 GGACAGACAGGACACAACAGAA 60.159 50.000 0.00 0.00 0.00 3.02
1300 1399 1.412710 GGACAGACAGGACACAACAGA 59.587 52.381 0.00 0.00 0.00 3.41
1301 1400 1.414181 AGGACAGACAGGACACAACAG 59.586 52.381 0.00 0.00 0.00 3.16
1302 1401 1.412710 GAGGACAGACAGGACACAACA 59.587 52.381 0.00 0.00 0.00 3.33
1303 1402 1.689273 AGAGGACAGACAGGACACAAC 59.311 52.381 0.00 0.00 0.00 3.32
1314 1413 1.004560 CGCAAGGCAAGAGGACAGA 60.005 57.895 0.00 0.00 0.00 3.41
1333 1432 1.457267 AGGCATTTGGTGTGGCACA 60.457 52.632 17.96 17.96 43.86 4.57
1334 1433 1.005867 CAGGCATTTGGTGTGGCAC 60.006 57.895 11.55 11.55 43.86 5.01
1335 1434 2.870119 GCAGGCATTTGGTGTGGCA 61.870 57.895 2.57 0.00 43.86 4.92
1338 1437 0.390124 ACAAGCAGGCATTTGGTGTG 59.610 50.000 0.00 0.00 0.00 3.82
1339 1438 0.390124 CACAAGCAGGCATTTGGTGT 59.610 50.000 0.00 0.00 0.00 4.16
1340 1439 0.390124 ACACAAGCAGGCATTTGGTG 59.610 50.000 0.00 0.00 0.00 4.17
1341 1440 0.675633 GACACAAGCAGGCATTTGGT 59.324 50.000 0.00 0.00 0.00 3.67
1342 1441 0.037975 GGACACAAGCAGGCATTTGG 60.038 55.000 0.00 0.00 0.00 3.28
1344 1443 0.675633 GTGGACACAAGCAGGCATTT 59.324 50.000 0.00 0.00 0.00 2.32
1345 1444 1.181098 GGTGGACACAAGCAGGCATT 61.181 55.000 4.69 0.00 0.00 3.56
1346 1445 1.604593 GGTGGACACAAGCAGGCAT 60.605 57.895 4.69 0.00 0.00 4.40
1347 1446 2.203337 GGTGGACACAAGCAGGCA 60.203 61.111 4.69 0.00 0.00 4.75
1348 1447 2.985847 GGGTGGACACAAGCAGGC 60.986 66.667 4.69 0.00 0.00 4.85
1349 1448 1.898574 GTGGGTGGACACAAGCAGG 60.899 63.158 4.69 0.00 40.99 4.85
1351 1450 2.050836 ATCGTGGGTGGACACAAGCA 62.051 55.000 4.69 0.00 41.38 3.91
1352 1451 0.036765 TATCGTGGGTGGACACAAGC 60.037 55.000 4.69 0.00 41.38 4.01
1353 1452 2.007049 GCTATCGTGGGTGGACACAAG 61.007 57.143 4.69 0.00 41.38 3.16
1354 1453 0.036765 GCTATCGTGGGTGGACACAA 60.037 55.000 4.69 0.00 41.38 3.33
1355 1454 1.594833 GCTATCGTGGGTGGACACA 59.405 57.895 4.69 0.00 41.38 3.72
1356 1455 1.153429 GGCTATCGTGGGTGGACAC 60.153 63.158 0.00 0.00 37.99 3.67
1357 1456 1.195442 TTGGCTATCGTGGGTGGACA 61.195 55.000 0.00 0.00 0.00 4.02
1358 1457 0.180406 ATTGGCTATCGTGGGTGGAC 59.820 55.000 0.00 0.00 0.00 4.02
1374 1494 0.463654 TCCGCCGGATTCCTGAATTG 60.464 55.000 5.05 0.00 0.00 2.32
1387 1508 2.480555 GCAACATCACTTCCGCCG 59.519 61.111 0.00 0.00 0.00 6.46
1389 1510 2.202349 GCGCAACATCACTTCCGC 60.202 61.111 0.30 0.00 34.50 5.54
1457 1579 1.211949 TGCTCCCCACTAACTAATGGC 59.788 52.381 0.00 0.00 34.37 4.40
1529 1651 3.184379 CGAACTTTTTCTCACGAGCATCA 59.816 43.478 0.00 0.00 33.17 3.07
1533 1655 3.000925 TGAACGAACTTTTTCTCACGAGC 59.999 43.478 0.00 0.00 0.00 5.03
1536 1658 5.083389 TGTTTGAACGAACTTTTTCTCACG 58.917 37.500 6.50 0.00 0.00 4.35
1619 1741 1.815421 GGCACATGCTACGACAGGG 60.815 63.158 3.48 0.00 41.70 4.45
1646 1768 0.370273 GCTATCGACAACCAAGCGTG 59.630 55.000 0.00 0.00 0.00 5.34
1693 1815 0.031857 TGAACCCACAAAATGCGCAG 59.968 50.000 18.32 4.18 0.00 5.18
1700 1822 1.133199 AGGCATCCTGAACCCACAAAA 60.133 47.619 0.00 0.00 29.57 2.44
1779 1902 5.200368 ACAAAGCCCAACAAACTAATCTG 57.800 39.130 0.00 0.00 0.00 2.90
1793 1916 0.673985 GAACACCTCCAACAAAGCCC 59.326 55.000 0.00 0.00 0.00 5.19
1815 1938 2.946564 TCTCACAAGCATCTGTACACG 58.053 47.619 0.00 0.00 0.00 4.49
1822 1949 3.633525 TGCACTTTTTCTCACAAGCATCT 59.366 39.130 0.00 0.00 0.00 2.90
1826 1953 4.362279 TGAATGCACTTTTTCTCACAAGC 58.638 39.130 0.00 0.00 0.00 4.01
1833 1960 8.169977 TCTTTATGTCTGAATGCACTTTTTCT 57.830 30.769 0.00 0.00 0.00 2.52
1842 1969 9.362539 ACAAAATCATTCTTTATGTCTGAATGC 57.637 29.630 9.30 0.00 43.74 3.56
1881 2008 5.757808 GGTAACACAAATGGAGCAAAACAAT 59.242 36.000 0.00 0.00 0.00 2.71
1887 2014 3.243704 GCAAGGTAACACAAATGGAGCAA 60.244 43.478 0.00 0.00 41.41 3.91
1893 2020 3.003275 AGACACGCAAGGTAACACAAATG 59.997 43.478 0.00 0.00 46.39 2.32
1915 2042 4.997395 GCTTCATTCTACTCTGTTTCCACA 59.003 41.667 0.00 0.00 0.00 4.17
1920 2047 4.006319 GCAGGCTTCATTCTACTCTGTTT 58.994 43.478 0.00 0.00 0.00 2.83
1975 2102 9.418045 GAAATAACCAAAGCAAAATACTAGCAA 57.582 29.630 0.00 0.00 0.00 3.91
2006 2133 3.165058 ACAGTCATCGTGTATTCGCAT 57.835 42.857 0.00 0.00 0.00 4.73
2016 2143 3.252701 AGAGTAACGTCAACAGTCATCGT 59.747 43.478 0.00 0.00 36.31 3.73
2025 2152 6.541111 AAATCCAAAGAGAGTAACGTCAAC 57.459 37.500 0.00 0.00 0.00 3.18
2026 2153 7.562454 AAAAATCCAAAGAGAGTAACGTCAA 57.438 32.000 0.00 0.00 0.00 3.18
2158 2286 6.663953 ACTCAGTTATAGTGACACTATGTGGT 59.336 38.462 30.20 20.71 41.23 4.16
2161 2289 8.035394 CCAAACTCAGTTATAGTGACACTATGT 58.965 37.037 30.20 18.82 41.23 2.29
2457 2585 4.568359 CAGTATAAGATATCACGGGCATGC 59.432 45.833 9.90 9.90 0.00 4.06
2535 2663 8.816144 TCAAGAAAACATCATTTTGTAAAGCAC 58.184 29.630 0.00 0.00 0.00 4.40
2672 2803 2.520741 CCTCCGGGGAGCTCTCTC 60.521 72.222 14.63 2.57 40.69 3.20
2790 2921 2.029649 AGCACTTGCAAAACCAGCATAG 60.030 45.455 0.00 0.00 45.16 2.23
2810 2941 4.396166 CCTACCAAGAGTGCCACATTTAAG 59.604 45.833 0.00 0.00 0.00 1.85
3122 3253 5.584649 CGAATTCAAAGGTGCTAGGATTGTA 59.415 40.000 6.22 0.00 0.00 2.41
3189 3320 4.855340 AGACCTCAAGTGGAAGAAACAAA 58.145 39.130 0.00 0.00 0.00 2.83
3259 3390 2.743928 CTCCCAAGACACAGCGGC 60.744 66.667 0.00 0.00 0.00 6.53
3261 3392 2.031012 TGCTCCCAAGACACAGCG 59.969 61.111 0.00 0.00 34.39 5.18
3470 3602 9.969001 AGTAACTTTGCCCAAGATAGTAAATTA 57.031 29.630 0.00 0.00 36.21 1.40
3490 3622 5.401531 TCTCATCGTAAGGCAAAGTAACT 57.598 39.130 0.00 0.00 38.47 2.24
3491 3623 5.502544 GCATCTCATCGTAAGGCAAAGTAAC 60.503 44.000 0.00 0.00 38.47 2.50
3493 3625 4.119862 GCATCTCATCGTAAGGCAAAGTA 58.880 43.478 0.00 0.00 38.47 2.24
3496 3628 2.677836 GTGCATCTCATCGTAAGGCAAA 59.322 45.455 0.00 0.00 38.47 3.68
3497 3629 2.279741 GTGCATCTCATCGTAAGGCAA 58.720 47.619 0.00 0.00 38.47 4.52
3500 3632 2.159043 ACAGGTGCATCTCATCGTAAGG 60.159 50.000 0.00 0.00 38.47 2.69
3593 3732 7.931948 GTGCATAGTACATCCAAATAACTAGGT 59.068 37.037 0.00 0.00 29.62 3.08
3613 3752 1.804151 GCCTCGAAACTGTTGTGCATA 59.196 47.619 0.00 0.00 0.00 3.14
3616 3755 1.282875 GGCCTCGAAACTGTTGTGC 59.717 57.895 0.00 0.00 0.00 4.57
3628 3767 4.696877 TGATTGCATAATAAGATGGCCTCG 59.303 41.667 3.32 0.00 0.00 4.63
3745 3900 5.337578 TGATGACAATAACATCGTCTCCA 57.662 39.130 0.00 0.00 44.64 3.86
3847 4002 2.477893 AATTCCTGCACCACCCCCA 61.478 57.895 0.00 0.00 0.00 4.96
4006 4161 2.334971 TCGAAACATTGTGCATGCTG 57.665 45.000 20.33 11.24 36.14 4.41
4218 4373 0.552848 ATTCCACGGATGCCTGGATT 59.447 50.000 5.81 0.47 36.42 3.01
4249 4404 7.009179 AGTCACAGAGTTTGAATATCCTTGA 57.991 36.000 0.00 0.00 0.00 3.02
4252 4407 5.485353 TGGAGTCACAGAGTTTGAATATCCT 59.515 40.000 0.00 0.00 0.00 3.24
4255 4410 6.611613 TCTGGAGTCACAGAGTTTGAATAT 57.388 37.500 7.10 0.00 42.26 1.28
4300 4455 4.735873 GCAGATCGATGTCTCTCACAATCA 60.736 45.833 0.54 0.00 38.97 2.57
4479 4637 0.809636 TGGCTAACACGATGCATCCG 60.810 55.000 20.87 17.15 0.00 4.18
4486 4644 9.944376 AAATAAGATATACATGGCTAACACGAT 57.056 29.630 0.00 0.00 0.00 3.73
4571 4729 2.478134 CAGAACAAGCTAGCACTGACAC 59.522 50.000 18.83 10.05 0.00 3.67
4696 4857 8.565896 TGCTCACAAAACTGAACATATCTAAT 57.434 30.769 0.00 0.00 0.00 1.73
4697 4858 7.119699 CCTGCTCACAAAACTGAACATATCTAA 59.880 37.037 0.00 0.00 0.00 2.10
4698 4859 6.595326 CCTGCTCACAAAACTGAACATATCTA 59.405 38.462 0.00 0.00 0.00 1.98
4699 4860 5.413833 CCTGCTCACAAAACTGAACATATCT 59.586 40.000 0.00 0.00 0.00 1.98
4707 4874 1.949525 GAAGCCTGCTCACAAAACTGA 59.050 47.619 0.00 0.00 0.00 3.41
4710 4877 1.322442 AGGAAGCCTGCTCACAAAAC 58.678 50.000 0.00 0.00 29.57 2.43
4720 4887 1.891150 ACTTGCAATGAAGGAAGCCTG 59.109 47.619 0.00 0.00 40.18 4.85
4819 5003 6.584185 TGCATAGCAGCAATCATTGAATAT 57.416 33.333 0.00 0.00 42.46 1.28
4832 5016 4.847633 TGATTCGTTATTTGCATAGCAGC 58.152 39.130 0.00 0.00 40.61 5.25
4863 5047 3.318839 TGTTTCCTCCTGCATTTCAGTTG 59.681 43.478 0.00 0.00 41.25 3.16
4886 5070 2.028561 AGCCATCCCATGTTTTTGGT 57.971 45.000 0.00 0.00 34.77 3.67
4887 5071 3.364549 TCTAGCCATCCCATGTTTTTGG 58.635 45.455 0.00 0.00 36.46 3.28
4888 5072 5.404466 TTTCTAGCCATCCCATGTTTTTG 57.596 39.130 0.00 0.00 0.00 2.44
4889 5073 6.183361 TGTTTTTCTAGCCATCCCATGTTTTT 60.183 34.615 0.00 0.00 0.00 1.94
4890 5074 5.306678 TGTTTTTCTAGCCATCCCATGTTTT 59.693 36.000 0.00 0.00 0.00 2.43
4891 5075 4.837860 TGTTTTTCTAGCCATCCCATGTTT 59.162 37.500 0.00 0.00 0.00 2.83
4892 5076 4.415596 TGTTTTTCTAGCCATCCCATGTT 58.584 39.130 0.00 0.00 0.00 2.71
4893 5077 4.019174 CTGTTTTTCTAGCCATCCCATGT 58.981 43.478 0.00 0.00 0.00 3.21
4894 5078 4.019174 ACTGTTTTTCTAGCCATCCCATG 58.981 43.478 0.00 0.00 0.00 3.66
4895 5079 4.322057 ACTGTTTTTCTAGCCATCCCAT 57.678 40.909 0.00 0.00 0.00 4.00
4896 5080 3.806949 ACTGTTTTTCTAGCCATCCCA 57.193 42.857 0.00 0.00 0.00 4.37
4897 5081 5.885912 TGAATACTGTTTTTCTAGCCATCCC 59.114 40.000 0.00 0.00 0.00 3.85
4898 5082 6.599638 ACTGAATACTGTTTTTCTAGCCATCC 59.400 38.462 0.00 0.00 0.00 3.51
4964 5171 3.497405 GCCTTCATCATCAGCCCATCTTA 60.497 47.826 0.00 0.00 0.00 2.10
5008 5218 9.374838 CCTTCATTTGATCTTTCTTAATTTGGG 57.625 33.333 0.00 0.00 0.00 4.12
5044 5268 4.657436 ATTGTTCGAGGAGGATCAGTAC 57.343 45.455 0.00 0.00 36.25 2.73
5049 5273 6.750148 AGTATGTTATTGTTCGAGGAGGATC 58.250 40.000 0.00 0.00 0.00 3.36
5118 5342 6.808212 GTGATGGACCACAAACTATGAATTTG 59.192 38.462 0.00 0.00 41.81 2.32
5300 5527 0.179062 ACATGGAGATCAAGCGAGCC 60.179 55.000 0.00 0.00 0.00 4.70


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.