Multiple sequence alignment - TraesCS4A01G358000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G358000 chr4A 100.000 3556 0 0 1 3556 631493247 631496802 0.000000e+00 6567
1 TraesCS4A01G358000 chr4A 83.384 1974 197 62 893 2792 631475865 631477781 0.000000e+00 1707
2 TraesCS4A01G358000 chr4A 80.932 1159 134 47 1640 2747 631501051 631502173 0.000000e+00 835
3 TraesCS4A01G358000 chr4A 79.779 1266 159 51 1536 2747 630877575 630876353 0.000000e+00 830
4 TraesCS4A01G358000 chr4A 82.334 951 116 22 985 1911 630899241 630898319 0.000000e+00 778
5 TraesCS4A01G358000 chr4A 86.941 559 41 19 943 1485 630878139 630877597 1.830000e-167 599
6 TraesCS4A01G358000 chr4A 84.416 308 30 11 2952 3241 685776569 685776876 1.620000e-73 287
7 TraesCS4A01G358000 chr5D 88.451 2130 143 42 866 2950 538425383 538423312 0.000000e+00 2475
8 TraesCS4A01G358000 chr5D 83.927 1966 180 59 981 2904 538442259 538440388 0.000000e+00 1755
9 TraesCS4A01G358000 chr5D 82.247 1166 132 46 962 2082 538621531 538622666 0.000000e+00 937
10 TraesCS4A01G358000 chr5D 84.283 948 107 21 991 1911 538655479 538656411 0.000000e+00 887
11 TraesCS4A01G358000 chr5D 84.651 873 110 20 1 851 538426305 538425435 0.000000e+00 848
12 TraesCS4A01G358000 chr5D 85.930 796 96 13 1 790 84314122 84314907 0.000000e+00 835
13 TraesCS4A01G358000 chr5D 84.467 882 97 22 977 1830 538417294 538416425 0.000000e+00 833
14 TraesCS4A01G358000 chr5D 85.264 794 109 8 1 790 29876839 29877628 0.000000e+00 811
15 TraesCS4A01G358000 chr5D 85.101 792 103 12 14 795 56808188 56807402 0.000000e+00 795
16 TraesCS4A01G358000 chr5D 85.664 572 55 15 2185 2732 538656448 538657016 8.560000e-161 577
17 TraesCS4A01G358000 chr5D 90.196 408 33 5 2207 2610 538622736 538623140 3.140000e-145 525
18 TraesCS4A01G358000 chr5D 90.909 319 23 4 3241 3556 538423312 538422997 1.180000e-114 424
19 TraesCS4A01G358000 chr5D 83.333 300 31 14 2949 3241 62143441 62143154 3.520000e-65 259
20 TraesCS4A01G358000 chr5B 89.424 1371 85 23 959 2283 679405360 679404004 0.000000e+00 1674
21 TraesCS4A01G358000 chr5B 85.185 1080 105 28 1000 2047 679559834 679558778 0.000000e+00 1057
22 TraesCS4A01G358000 chr5B 85.512 635 49 18 2320 2952 679404005 679403412 1.080000e-174 623
23 TraesCS4A01G358000 chr5B 88.626 422 43 4 2218 2634 679558584 679558163 3.170000e-140 508
24 TraesCS4A01G358000 chr5B 82.862 566 41 25 966 1502 679379454 679378916 1.160000e-124 457
25 TraesCS4A01G358000 chr5B 91.900 321 23 2 3239 3556 679403414 679403094 2.520000e-121 446
26 TraesCS4A01G358000 chr1D 86.633 793 101 5 1 790 228825729 228824939 0.000000e+00 872
27 TraesCS4A01G358000 chr1D 83.552 687 64 25 2232 2904 6386263 6385612 6.570000e-167 597
28 TraesCS4A01G358000 chr1D 87.415 294 24 7 2952 3241 17231832 17232116 3.420000e-85 326
29 TraesCS4A01G358000 chr7B 85.624 793 103 10 1 790 561276273 561275489 0.000000e+00 822
30 TraesCS4A01G358000 chr6D 85.342 805 103 14 1 798 63120166 63120962 0.000000e+00 819
31 TraesCS4A01G358000 chr3D 85.422 782 106 6 1 776 8383042 8383821 0.000000e+00 806
32 TraesCS4A01G358000 chr3D 83.203 256 24 3 2952 3189 593219624 593219370 2.150000e-52 217
33 TraesCS4A01G358000 chr3D 82.273 220 28 8 2952 3161 312257903 312258121 2.820000e-41 180
34 TraesCS4A01G358000 chr7D 84.930 783 112 6 10 789 513205438 513204659 0.000000e+00 787
35 TraesCS4A01G358000 chr7D 84.466 309 25 11 2952 3241 106263073 106262769 2.090000e-72 283
36 TraesCS4A01G358000 chr7D 82.372 312 43 9 2939 3240 632020133 632019824 9.790000e-66 261
37 TraesCS4A01G358000 chrUn 80.678 1092 144 34 976 2020 67363412 67362341 0.000000e+00 785
38 TraesCS4A01G358000 chrUn 83.601 311 26 8 2952 3241 89795088 89794782 5.850000e-68 268
39 TraesCS4A01G358000 chr2D 84.365 307 30 3 2953 3241 54754610 54754916 5.810000e-73 285
40 TraesCS4A01G358000 chr7A 83.232 328 33 11 2942 3250 716345757 716345433 7.520000e-72 281
41 TraesCS4A01G358000 chr7A 83.596 317 31 14 2938 3241 73745572 73745880 9.720000e-71 278
42 TraesCS4A01G358000 chr3A 84.091 308 27 8 2952 3241 19567158 19566855 9.720000e-71 278
43 TraesCS4A01G358000 chr2A 83.819 309 32 12 2943 3245 68506323 68506619 9.720000e-71 278
44 TraesCS4A01G358000 chr2A 82.258 310 37 10 2936 3241 398727453 398727158 5.890000e-63 252
45 TraesCS4A01G358000 chr6A 81.194 335 40 11 2925 3241 2127384 2127055 7.620000e-62 248
46 TraesCS4A01G358000 chr1B 88.421 190 21 1 3052 3241 107382961 107383149 9.930000e-56 228
47 TraesCS4A01G358000 chr1A 82.266 203 26 6 2954 3146 201864657 201864455 2.200000e-37 167


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G358000 chr4A 631493247 631496802 3555 False 6567.000000 6567 100.000000 1 3556 1 chr4A.!!$F2 3555
1 TraesCS4A01G358000 chr4A 631475865 631477781 1916 False 1707.000000 1707 83.384000 893 2792 1 chr4A.!!$F1 1899
2 TraesCS4A01G358000 chr4A 631501051 631502173 1122 False 835.000000 835 80.932000 1640 2747 1 chr4A.!!$F3 1107
3 TraesCS4A01G358000 chr4A 630898319 630899241 922 True 778.000000 778 82.334000 985 1911 1 chr4A.!!$R1 926
4 TraesCS4A01G358000 chr4A 630876353 630878139 1786 True 714.500000 830 83.360000 943 2747 2 chr4A.!!$R2 1804
5 TraesCS4A01G358000 chr5D 538440388 538442259 1871 True 1755.000000 1755 83.927000 981 2904 1 chr5D.!!$R4 1923
6 TraesCS4A01G358000 chr5D 538422997 538426305 3308 True 1249.000000 2475 88.003667 1 3556 3 chr5D.!!$R5 3555
7 TraesCS4A01G358000 chr5D 84314122 84314907 785 False 835.000000 835 85.930000 1 790 1 chr5D.!!$F2 789
8 TraesCS4A01G358000 chr5D 538416425 538417294 869 True 833.000000 833 84.467000 977 1830 1 chr5D.!!$R3 853
9 TraesCS4A01G358000 chr5D 29876839 29877628 789 False 811.000000 811 85.264000 1 790 1 chr5D.!!$F1 789
10 TraesCS4A01G358000 chr5D 56807402 56808188 786 True 795.000000 795 85.101000 14 795 1 chr5D.!!$R1 781
11 TraesCS4A01G358000 chr5D 538655479 538657016 1537 False 732.000000 887 84.973500 991 2732 2 chr5D.!!$F4 1741
12 TraesCS4A01G358000 chr5D 538621531 538623140 1609 False 731.000000 937 86.221500 962 2610 2 chr5D.!!$F3 1648
13 TraesCS4A01G358000 chr5B 679403094 679405360 2266 True 914.333333 1674 88.945333 959 3556 3 chr5B.!!$R2 2597
14 TraesCS4A01G358000 chr5B 679558163 679559834 1671 True 782.500000 1057 86.905500 1000 2634 2 chr5B.!!$R3 1634
15 TraesCS4A01G358000 chr5B 679378916 679379454 538 True 457.000000 457 82.862000 966 1502 1 chr5B.!!$R1 536
16 TraesCS4A01G358000 chr1D 228824939 228825729 790 True 872.000000 872 86.633000 1 790 1 chr1D.!!$R2 789
17 TraesCS4A01G358000 chr1D 6385612 6386263 651 True 597.000000 597 83.552000 2232 2904 1 chr1D.!!$R1 672
18 TraesCS4A01G358000 chr7B 561275489 561276273 784 True 822.000000 822 85.624000 1 790 1 chr7B.!!$R1 789
19 TraesCS4A01G358000 chr6D 63120166 63120962 796 False 819.000000 819 85.342000 1 798 1 chr6D.!!$F1 797
20 TraesCS4A01G358000 chr3D 8383042 8383821 779 False 806.000000 806 85.422000 1 776 1 chr3D.!!$F1 775
21 TraesCS4A01G358000 chr7D 513204659 513205438 779 True 787.000000 787 84.930000 10 789 1 chr7D.!!$R2 779
22 TraesCS4A01G358000 chrUn 67362341 67363412 1071 True 785.000000 785 80.678000 976 2020 1 chrUn.!!$R1 1044

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
625 633 0.037605 GTTGTCTAGGTGGTGGTCCG 60.038 60.0 0.0 0.0 36.3 4.79 F
917 976 0.594602 GCCACGTTACTTTTCCCCAC 59.405 55.0 0.0 0.0 0.0 4.61 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1687 1900 0.032952 CTGGCACTGCACAGCATTTT 59.967 50.0 2.82 0.0 38.13 1.82 R
2829 3452 0.323451 GGGAAATGGGAGAAACGGCT 60.323 55.0 0.00 0.0 0.00 5.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
43 44 5.473504 TCTTTTTGCTCTAAGATGGTGTTCC 59.526 40.000 0.00 0.00 0.00 3.62
47 48 0.174845 TCTAAGATGGTGTTCCGCCG 59.825 55.000 0.00 0.00 36.72 6.46
52 53 2.322999 GATGGTGTTCCGCCGATTGC 62.323 60.000 0.00 0.00 36.72 3.56
53 54 3.810896 GGTGTTCCGCCGATTGCC 61.811 66.667 0.00 0.00 36.24 4.52
55 56 4.380781 TGTTCCGCCGATTGCCGA 62.381 61.111 0.00 0.00 41.76 5.54
69 70 1.070445 GCCGACCCTCATGGATCTG 59.930 63.158 0.00 0.00 38.00 2.90
70 71 1.402896 GCCGACCCTCATGGATCTGA 61.403 60.000 0.00 0.00 38.00 3.27
78 79 3.474600 CCTCATGGATCTGACCATTGAC 58.525 50.000 8.45 0.00 47.00 3.18
85 86 2.743636 TCTGACCATTGACGAGTTCC 57.256 50.000 0.00 0.00 0.00 3.62
87 88 0.037697 TGACCATTGACGAGTTCCGG 60.038 55.000 0.00 0.00 43.93 5.14
122 123 4.205587 GAGATCTTCATTGGGTGCTTGAT 58.794 43.478 0.00 0.00 0.00 2.57
125 126 0.896923 TTCATTGGGTGCTTGATGCC 59.103 50.000 0.00 0.00 42.00 4.40
126 127 0.040058 TCATTGGGTGCTTGATGCCT 59.960 50.000 0.00 0.00 42.00 4.75
137 138 2.033049 GCTTGATGCCTGTAGATTGCTG 59.967 50.000 0.00 0.00 35.15 4.41
147 148 3.819337 CTGTAGATTGCTGGATTGGATGG 59.181 47.826 0.00 0.00 0.00 3.51
153 154 1.570024 TGCTGGATTGGATGGGATTCA 59.430 47.619 0.00 0.00 0.00 2.57
154 155 2.024177 TGCTGGATTGGATGGGATTCAA 60.024 45.455 0.00 0.00 0.00 2.69
169 170 0.888736 TTCAATCGTGTGCACCCCTG 60.889 55.000 15.69 4.85 0.00 4.45
173 174 0.467290 ATCGTGTGCACCCCTGTTTT 60.467 50.000 15.69 0.00 0.00 2.43
183 184 0.037734 CCCCTGTTTTAGCCCGAGTT 59.962 55.000 0.00 0.00 0.00 3.01
190 191 1.519408 TTTAGCCCGAGTTGCTTCAC 58.481 50.000 0.00 0.00 40.23 3.18
192 193 1.812686 TAGCCCGAGTTGCTTCACGT 61.813 55.000 0.00 0.00 40.23 4.49
195 196 2.317609 CCGAGTTGCTTCACGTGGG 61.318 63.158 17.00 10.25 0.00 4.61
196 197 1.594293 CGAGTTGCTTCACGTGGGT 60.594 57.895 17.00 0.00 0.00 4.51
208 209 3.041940 GTGGGTGTGACGCGAAGG 61.042 66.667 15.93 0.00 33.25 3.46
231 232 1.401552 CGGTGCCTGTTGACATTATGG 59.598 52.381 0.00 0.00 0.00 2.74
265 266 5.567138 ATTTCGATTTCCATGGTGAAGAC 57.433 39.130 12.58 6.18 0.00 3.01
268 269 3.007940 TCGATTTCCATGGTGAAGACAGT 59.992 43.478 12.58 0.00 0.00 3.55
291 292 1.021390 GGAGAACGTCATGGTGGCTG 61.021 60.000 0.00 0.00 0.00 4.85
294 295 1.003355 AACGTCATGGTGGCTGAGG 60.003 57.895 0.00 0.00 35.27 3.86
313 314 2.729028 GCCTAAGGCCTTGTAATGGA 57.271 50.000 28.77 4.85 44.06 3.41
326 327 5.395768 CCTTGTAATGGAGGATCGAGTCTTT 60.396 44.000 0.00 0.00 34.91 2.52
331 332 1.550976 GGAGGATCGAGTCTTTGTGGT 59.449 52.381 0.00 0.00 34.37 4.16
332 333 2.028020 GGAGGATCGAGTCTTTGTGGTT 60.028 50.000 0.00 0.00 34.37 3.67
338 339 4.866508 TCGAGTCTTTGTGGTTATGAGT 57.133 40.909 0.00 0.00 0.00 3.41
344 345 7.359264 CGAGTCTTTGTGGTTATGAGTACTTTG 60.359 40.741 0.00 0.00 0.00 2.77
363 364 0.716108 GCTTGGTGATTCGTGACTCG 59.284 55.000 0.00 0.00 41.41 4.18
372 373 0.312729 TTCGTGACTCGTAGCAGCAA 59.687 50.000 0.00 0.00 40.80 3.91
381 382 1.717937 GTAGCAGCAACATCGGCAG 59.282 57.895 0.00 0.00 0.00 4.85
382 383 1.450134 TAGCAGCAACATCGGCAGG 60.450 57.895 0.00 0.00 0.00 4.85
383 384 2.184020 TAGCAGCAACATCGGCAGGT 62.184 55.000 0.00 0.00 33.11 4.00
384 385 2.872557 CAGCAACATCGGCAGGTG 59.127 61.111 0.00 0.00 0.00 4.00
385 386 2.360350 AGCAACATCGGCAGGTGG 60.360 61.111 1.23 0.00 0.00 4.61
408 409 2.949177 TGGCAACACAAGTGGAGTAT 57.051 45.000 5.08 0.00 46.17 2.12
418 419 8.470805 CAACACAAGTGGAGTATAGAGTCTTAT 58.529 37.037 0.00 0.00 34.19 1.73
425 426 9.349713 AGTGGAGTATAGAGTCTTATCTTTCAG 57.650 37.037 0.00 0.00 0.00 3.02
434 436 6.271159 AGAGTCTTATCTTTCAGGGTGAAACT 59.729 38.462 0.00 0.00 41.02 2.66
438 440 7.391833 GTCTTATCTTTCAGGGTGAAACTCAAT 59.608 37.037 0.00 0.00 42.69 2.57
460 462 1.892474 TCTGGCCTTAATTGGTTGTGC 59.108 47.619 3.32 0.00 0.00 4.57
495 497 4.998671 TGTTGAAGGCATTGTTTTGAGA 57.001 36.364 0.00 0.00 0.00 3.27
497 499 3.648339 TGAAGGCATTGTTTTGAGAGC 57.352 42.857 0.00 0.00 0.00 4.09
499 501 1.609208 AGGCATTGTTTTGAGAGCGT 58.391 45.000 0.00 0.00 0.00 5.07
503 505 2.095059 GCATTGTTTTGAGAGCGTGGAT 60.095 45.455 0.00 0.00 0.00 3.41
505 507 2.839486 TGTTTTGAGAGCGTGGATCT 57.161 45.000 0.00 0.00 0.00 2.75
506 508 3.126001 TGTTTTGAGAGCGTGGATCTT 57.874 42.857 0.00 0.00 0.00 2.40
507 509 3.067106 TGTTTTGAGAGCGTGGATCTTC 58.933 45.455 0.00 0.00 0.00 2.87
512 520 2.020720 GAGAGCGTGGATCTTCTCAGA 58.979 52.381 0.00 0.00 0.00 3.27
515 523 2.946329 GAGCGTGGATCTTCTCAGAGTA 59.054 50.000 0.00 0.00 30.36 2.59
517 525 3.764434 AGCGTGGATCTTCTCAGAGTAAA 59.236 43.478 0.00 0.00 30.36 2.01
525 533 8.314751 TGGATCTTCTCAGAGTAAAAACCTAAG 58.685 37.037 0.00 0.00 30.36 2.18
546 554 2.438868 TCTATGATTGGGCGATGACG 57.561 50.000 0.00 0.00 42.93 4.35
547 555 1.960689 TCTATGATTGGGCGATGACGA 59.039 47.619 0.00 0.00 42.66 4.20
568 576 0.039708 GCTTGTGCACTGCTTCCTTC 60.040 55.000 19.41 0.00 39.41 3.46
585 593 1.721926 CTTCTTGGAGACGTCGCTTTC 59.278 52.381 18.88 6.62 0.00 2.62
607 615 3.676093 GAAGAATTTGGACTTCGGGAGT 58.324 45.455 0.00 0.00 42.70 3.85
623 631 1.275573 GGAGTTGTCTAGGTGGTGGTC 59.724 57.143 0.00 0.00 0.00 4.02
624 632 1.275573 GAGTTGTCTAGGTGGTGGTCC 59.724 57.143 0.00 0.00 0.00 4.46
625 633 0.037605 GTTGTCTAGGTGGTGGTCCG 60.038 60.000 0.00 0.00 36.30 4.79
637 645 2.815647 GGTCCGTGCTGCAGCTAC 60.816 66.667 36.61 28.99 42.66 3.58
651 659 5.741040 GCTGCAGCTACAAGAAATTGATTAC 59.259 40.000 31.33 0.00 38.21 1.89
652 660 6.404074 GCTGCAGCTACAAGAAATTGATTACT 60.404 38.462 31.33 0.00 38.21 2.24
654 662 5.741040 GCAGCTACAAGAAATTGATTACTGC 59.259 40.000 0.00 0.00 38.85 4.40
658 666 4.726416 ACAAGAAATTGATTACTGCAGCG 58.274 39.130 15.27 0.00 0.00 5.18
660 673 4.346734 AGAAATTGATTACTGCAGCGTG 57.653 40.909 15.27 0.00 0.00 5.34
661 674 4.002982 AGAAATTGATTACTGCAGCGTGA 58.997 39.130 15.27 0.00 0.00 4.35
666 679 3.599343 TGATTACTGCAGCGTGATCTTT 58.401 40.909 15.27 0.00 32.80 2.52
667 680 4.754322 TGATTACTGCAGCGTGATCTTTA 58.246 39.130 15.27 0.00 32.80 1.85
669 682 5.817296 TGATTACTGCAGCGTGATCTTTATT 59.183 36.000 15.27 0.00 32.80 1.40
671 684 6.494893 TTACTGCAGCGTGATCTTTATTTT 57.505 33.333 15.27 0.00 0.00 1.82
672 685 5.376854 ACTGCAGCGTGATCTTTATTTTT 57.623 34.783 15.27 0.00 0.00 1.94
711 731 3.252944 TGGTTGTGTGCATCTGTAATGTG 59.747 43.478 0.00 0.00 0.00 3.21
718 738 4.991687 TGTGCATCTGTAATGTGTTTACGA 59.008 37.500 0.00 0.00 42.68 3.43
719 739 5.107259 TGTGCATCTGTAATGTGTTTACGAC 60.107 40.000 0.00 0.00 42.68 4.34
725 745 4.703424 TGTAATGTGTTTACGACATTGCG 58.297 39.130 9.08 0.00 44.66 4.85
739 759 3.731136 TGCGTTGTTGCAGAGACC 58.269 55.556 0.00 0.00 40.62 3.85
741 761 1.954146 GCGTTGTTGCAGAGACCGA 60.954 57.895 0.00 0.00 34.15 4.69
745 765 0.874390 TTGTTGCAGAGACCGAATGC 59.126 50.000 0.00 0.00 40.40 3.56
751 771 1.202222 GCAGAGACCGAATGCAATTGG 60.202 52.381 6.49 6.49 36.07 3.16
755 775 4.024556 CAGAGACCGAATGCAATTGGTATC 60.025 45.833 23.15 23.15 41.61 2.24
760 780 3.304257 CCGAATGCAATTGGTATCTCTGC 60.304 47.826 7.72 0.00 36.07 4.26
765 785 6.619446 GAATGCAATTGGTATCTCTGCGATAC 60.619 42.308 7.72 8.86 44.31 2.24
824 844 5.845391 AAACAAGAGGAACGGATTTTCAA 57.155 34.783 0.00 0.00 0.00 2.69
826 846 5.376854 ACAAGAGGAACGGATTTTCAATG 57.623 39.130 0.00 0.00 0.00 2.82
830 850 2.493278 AGGAACGGATTTTCAATGGCAG 59.507 45.455 0.00 0.00 0.00 4.85
835 855 3.181497 ACGGATTTTCAATGGCAGAATCG 60.181 43.478 0.00 0.00 0.00 3.34
839 859 1.462616 TTCAATGGCAGAATCGTGGG 58.537 50.000 0.00 0.00 0.00 4.61
840 860 1.031571 TCAATGGCAGAATCGTGGGC 61.032 55.000 0.00 0.00 0.00 5.36
841 861 1.033746 CAATGGCAGAATCGTGGGCT 61.034 55.000 0.00 0.00 0.00 5.19
843 863 2.514824 GGCAGAATCGTGGGCTCC 60.515 66.667 0.00 0.00 0.00 4.70
854 881 2.632996 TCGTGGGCTCCTAGAATAATGG 59.367 50.000 0.00 0.00 0.00 3.16
856 883 2.373502 GTGGGCTCCTAGAATAATGGCT 59.626 50.000 0.00 0.00 0.00 4.75
885 944 1.082104 CGCGGTGGTTGAAGAAAGC 60.082 57.895 0.00 0.00 36.78 3.51
917 976 0.594602 GCCACGTTACTTTTCCCCAC 59.405 55.000 0.00 0.00 0.00 4.61
940 999 4.284550 GCCCAGCCCAGTTCACCA 62.285 66.667 0.00 0.00 0.00 4.17
979 1062 1.280421 CACCCAAGAAGAGGAAGAGGG 59.720 57.143 0.00 0.00 40.66 4.30
1068 1151 3.682292 GAACCGCCGGAAGCTGGAT 62.682 63.158 11.71 0.00 40.39 3.41
1616 1828 2.271800 GTTGTGACAGATGATCCCGAC 58.728 52.381 0.00 0.00 0.00 4.79
1666 1879 2.915659 AGGCGGTCGTCTTGGTGA 60.916 61.111 0.00 0.00 0.00 4.02
1687 1900 1.248101 TGAGGCGGATGTCGAGTTCA 61.248 55.000 0.00 0.00 42.43 3.18
1689 1902 0.320374 AGGCGGATGTCGAGTTCAAA 59.680 50.000 0.00 0.00 42.43 2.69
1700 1913 2.031769 TCGAGTTCAAAATGCTGTGCAG 60.032 45.455 0.00 0.00 43.65 4.41
1723 1945 3.994853 GCAAACAGGGCAGGCACC 61.995 66.667 0.00 0.00 0.00 5.01
1797 2019 1.066929 GGCGATTGCTTGGTTTTCCAT 60.067 47.619 4.59 0.00 43.58 3.41
1900 2128 6.071624 TAGGAACTCCACATTCAGTGCGAA 62.072 45.833 0.00 0.00 43.44 4.70
2082 2387 9.878737 ACCTGTTATGTCTACATAATACCTAGT 57.121 33.333 16.34 7.88 46.63 2.57
2107 2412 9.118300 GTTACCTACTAGAGTCATTGCTTAGTA 57.882 37.037 0.00 0.00 0.00 1.82
2108 2413 7.571080 ACCTACTAGAGTCATTGCTTAGTAC 57.429 40.000 0.00 0.00 0.00 2.73
2109 2414 7.348033 ACCTACTAGAGTCATTGCTTAGTACT 58.652 38.462 0.00 0.00 0.00 2.73
2216 2583 8.243961 AGCTGTGTCTACTTATTCATAGATGT 57.756 34.615 0.00 0.00 30.35 3.06
2239 2619 3.577805 AACTAGGCTTGTTTGGACTGT 57.422 42.857 8.55 0.00 0.00 3.55
2268 2648 2.407268 TGCACACAGTTTGCAGGAG 58.593 52.632 10.44 0.00 45.06 3.69
2270 2650 1.024271 GCACACAGTTTGCAGGAGAA 58.976 50.000 6.82 0.00 39.93 2.87
2315 2702 8.871125 CCTACTGTATATACCTTCATTCCAACT 58.129 37.037 10.38 0.00 0.00 3.16
2585 3109 1.680735 GTGCTTCCCACACAATGTTCA 59.319 47.619 0.00 0.00 44.06 3.18
2623 3182 7.225734 GGTACATTGTTTTTACCATTGTTTGCT 59.774 33.333 0.00 0.00 36.12 3.91
2634 3227 6.173427 ACCATTGTTTGCTTAGGTTGAATT 57.827 33.333 0.00 0.00 0.00 2.17
2635 3228 6.223120 ACCATTGTTTGCTTAGGTTGAATTC 58.777 36.000 0.00 0.00 0.00 2.17
2636 3229 5.639082 CCATTGTTTGCTTAGGTTGAATTCC 59.361 40.000 2.27 0.00 0.00 3.01
2637 3230 5.860941 TTGTTTGCTTAGGTTGAATTCCA 57.139 34.783 2.27 0.00 0.00 3.53
2638 3231 6.418057 TTGTTTGCTTAGGTTGAATTCCAT 57.582 33.333 2.27 0.00 0.00 3.41
2639 3232 7.531857 TTGTTTGCTTAGGTTGAATTCCATA 57.468 32.000 2.27 0.00 0.00 2.74
2640 3233 6.919721 TGTTTGCTTAGGTTGAATTCCATAC 58.080 36.000 2.27 0.00 0.00 2.39
2641 3234 6.071616 TGTTTGCTTAGGTTGAATTCCATACC 60.072 38.462 2.27 8.04 0.00 2.73
2642 3235 5.186256 TGCTTAGGTTGAATTCCATACCA 57.814 39.130 18.29 6.80 32.16 3.25
2643 3236 5.765510 TGCTTAGGTTGAATTCCATACCAT 58.234 37.500 18.29 9.65 32.16 3.55
2644 3237 5.827797 TGCTTAGGTTGAATTCCATACCATC 59.172 40.000 18.29 8.57 32.16 3.51
2645 3238 5.827797 GCTTAGGTTGAATTCCATACCATCA 59.172 40.000 18.29 5.75 32.16 3.07
2646 3239 6.491403 GCTTAGGTTGAATTCCATACCATCAT 59.509 38.462 18.29 5.68 32.16 2.45
2647 3240 7.014615 GCTTAGGTTGAATTCCATACCATCATT 59.985 37.037 18.29 5.41 32.16 2.57
2648 3241 8.837099 TTAGGTTGAATTCCATACCATCATTT 57.163 30.769 18.29 4.90 32.16 2.32
2649 3242 7.116075 AGGTTGAATTCCATACCATCATTTG 57.884 36.000 18.29 0.00 32.16 2.32
2650 3243 5.754890 GGTTGAATTCCATACCATCATTTGC 59.245 40.000 13.62 0.00 0.00 3.68
2651 3244 5.534207 TGAATTCCATACCATCATTTGCC 57.466 39.130 2.27 0.00 0.00 4.52
2652 3245 5.210430 TGAATTCCATACCATCATTTGCCT 58.790 37.500 2.27 0.00 0.00 4.75
2653 3246 6.372104 TGAATTCCATACCATCATTTGCCTA 58.628 36.000 2.27 0.00 0.00 3.93
2654 3247 6.491062 TGAATTCCATACCATCATTTGCCTAG 59.509 38.462 2.27 0.00 0.00 3.02
2655 3248 4.371624 TCCATACCATCATTTGCCTAGG 57.628 45.455 3.67 3.67 0.00 3.02
2656 3249 3.721575 TCCATACCATCATTTGCCTAGGT 59.278 43.478 11.31 0.00 0.00 3.08
2657 3250 4.074970 CCATACCATCATTTGCCTAGGTC 58.925 47.826 11.31 3.32 0.00 3.85
2658 3251 2.332063 ACCATCATTTGCCTAGGTCG 57.668 50.000 11.31 0.00 0.00 4.79
2659 3252 1.837439 ACCATCATTTGCCTAGGTCGA 59.163 47.619 11.31 0.00 0.00 4.20
2660 3253 2.238646 ACCATCATTTGCCTAGGTCGAA 59.761 45.455 11.31 9.28 0.00 3.71
2661 3254 3.117888 ACCATCATTTGCCTAGGTCGAAT 60.118 43.478 11.31 11.13 0.00 3.34
2662 3255 3.251729 CCATCATTTGCCTAGGTCGAATG 59.748 47.826 25.46 25.46 0.00 2.67
2678 3298 3.853103 TCGAATGCTTGAATTCAATTGCG 59.147 39.130 20.76 17.43 36.52 4.85
2684 3304 2.532723 CTTGAATTCAATTGCGGATGCG 59.467 45.455 20.76 0.65 38.51 4.73
2747 3370 6.518208 AAAATACAAACCCGCTTGCTTATA 57.482 33.333 0.00 0.00 0.00 0.98
2756 3379 3.673809 CCCGCTTGCTTATATACGAGTTC 59.326 47.826 0.00 0.00 0.00 3.01
2761 3384 6.129326 CGCTTGCTTATATACGAGTTCTGAAG 60.129 42.308 0.00 0.00 0.00 3.02
2767 3390 9.084164 GCTTATATACGAGTTCTGAAGAAACAA 57.916 33.333 0.00 0.00 35.58 2.83
2787 3410 1.696063 AACTGCATTTCCAGCACTGT 58.304 45.000 0.00 0.00 37.02 3.55
2788 3411 2.566833 ACTGCATTTCCAGCACTGTA 57.433 45.000 0.00 0.00 37.02 2.74
2789 3412 2.430465 ACTGCATTTCCAGCACTGTAG 58.570 47.619 0.00 0.00 37.02 2.74
2790 3413 2.224621 ACTGCATTTCCAGCACTGTAGT 60.225 45.455 0.00 0.00 37.02 2.73
2791 3414 2.816087 CTGCATTTCCAGCACTGTAGTT 59.184 45.455 0.00 0.00 37.02 2.24
2792 3415 3.221771 TGCATTTCCAGCACTGTAGTTT 58.778 40.909 0.00 0.00 37.02 2.66
2793 3416 3.636300 TGCATTTCCAGCACTGTAGTTTT 59.364 39.130 0.00 0.00 37.02 2.43
2794 3417 4.229876 GCATTTCCAGCACTGTAGTTTTC 58.770 43.478 0.00 0.00 0.00 2.29
2795 3418 4.798574 CATTTCCAGCACTGTAGTTTTCC 58.201 43.478 0.00 0.00 0.00 3.13
2796 3419 3.569194 TTCCAGCACTGTAGTTTTCCA 57.431 42.857 0.00 0.00 0.00 3.53
2797 3420 3.126001 TCCAGCACTGTAGTTTTCCAG 57.874 47.619 0.00 0.00 34.82 3.86
2798 3421 1.537202 CCAGCACTGTAGTTTTCCAGC 59.463 52.381 0.00 0.00 31.76 4.85
2799 3422 1.537202 CAGCACTGTAGTTTTCCAGCC 59.463 52.381 0.00 0.00 31.76 4.85
2800 3423 1.421646 AGCACTGTAGTTTTCCAGCCT 59.578 47.619 0.00 0.00 31.76 4.58
2801 3424 1.537202 GCACTGTAGTTTTCCAGCCTG 59.463 52.381 0.00 0.00 31.76 4.85
2802 3425 2.851195 CACTGTAGTTTTCCAGCCTGT 58.149 47.619 0.00 0.00 31.76 4.00
2818 3441 6.156949 TCCAGCCTGTAGTTAGATCTTTTCAT 59.843 38.462 0.00 0.00 0.00 2.57
2828 3451 3.411446 AGATCTTTTCATGGAACGCACA 58.589 40.909 0.00 0.00 0.00 4.57
2829 3452 3.820467 AGATCTTTTCATGGAACGCACAA 59.180 39.130 0.00 0.00 0.00 3.33
2853 3477 3.883489 CCGTTTCTCCCATTTCCCTATTC 59.117 47.826 0.00 0.00 0.00 1.75
2936 3562 5.685954 AGAATACACACAAGCATACGTATCG 59.314 40.000 4.74 3.03 0.00 2.92
2965 3593 7.625828 TTTATAGAAGACTAGCAAAAAGGCC 57.374 36.000 0.00 0.00 31.78 5.19
2966 3594 2.796557 AGAAGACTAGCAAAAAGGCCC 58.203 47.619 0.00 0.00 0.00 5.80
2967 3595 1.468914 GAAGACTAGCAAAAAGGCCCG 59.531 52.381 0.00 0.00 0.00 6.13
2968 3596 0.400594 AGACTAGCAAAAAGGCCCGT 59.599 50.000 0.00 0.00 0.00 5.28
2969 3597 0.521735 GACTAGCAAAAAGGCCCGTG 59.478 55.000 0.00 0.00 0.00 4.94
2970 3598 1.212751 CTAGCAAAAAGGCCCGTGC 59.787 57.895 0.00 4.01 37.26 5.34
2971 3599 2.527547 CTAGCAAAAAGGCCCGTGCG 62.528 60.000 0.00 0.00 41.90 5.34
2972 3600 4.279043 GCAAAAAGGCCCGTGCGT 62.279 61.111 0.00 0.00 38.85 5.24
2973 3601 2.415426 CAAAAAGGCCCGTGCGTT 59.585 55.556 0.00 0.00 46.85 4.84
2974 3602 1.948635 CAAAAAGGCCCGTGCGTTG 60.949 57.895 0.00 0.00 44.30 4.10
2975 3603 3.783478 AAAAAGGCCCGTGCGTTGC 62.783 57.895 0.00 0.00 44.30 4.17
2991 3619 3.430333 GTTGCAACGGGAGAAGAAAAA 57.570 42.857 14.90 0.00 0.00 1.94
2992 3620 3.977427 GTTGCAACGGGAGAAGAAAAAT 58.023 40.909 14.90 0.00 0.00 1.82
2993 3621 3.915437 TGCAACGGGAGAAGAAAAATC 57.085 42.857 0.00 0.00 0.00 2.17
2994 3622 2.556622 TGCAACGGGAGAAGAAAAATCC 59.443 45.455 0.00 0.00 0.00 3.01
2995 3623 2.820197 GCAACGGGAGAAGAAAAATCCT 59.180 45.455 0.00 0.00 33.40 3.24
2996 3624 3.119814 GCAACGGGAGAAGAAAAATCCTC 60.120 47.826 0.00 0.00 33.40 3.71
2997 3625 4.327680 CAACGGGAGAAGAAAAATCCTCT 58.672 43.478 0.00 0.00 33.40 3.69
2998 3626 4.209307 ACGGGAGAAGAAAAATCCTCTC 57.791 45.455 0.00 0.00 33.40 3.20
2999 3627 3.583086 ACGGGAGAAGAAAAATCCTCTCA 59.417 43.478 6.75 0.00 33.40 3.27
3000 3628 4.226168 ACGGGAGAAGAAAAATCCTCTCAT 59.774 41.667 6.75 0.00 33.40 2.90
3001 3629 5.425539 ACGGGAGAAGAAAAATCCTCTCATA 59.574 40.000 6.75 0.00 33.40 2.15
3002 3630 6.100424 ACGGGAGAAGAAAAATCCTCTCATAT 59.900 38.462 6.75 0.00 33.40 1.78
3003 3631 6.648725 CGGGAGAAGAAAAATCCTCTCATATC 59.351 42.308 6.75 0.00 33.40 1.63
3004 3632 7.472663 CGGGAGAAGAAAAATCCTCTCATATCT 60.473 40.741 6.75 0.00 33.40 1.98
3005 3633 7.877612 GGGAGAAGAAAAATCCTCTCATATCTC 59.122 40.741 6.75 0.00 33.40 2.75
3006 3634 8.650490 GGAGAAGAAAAATCCTCTCATATCTCT 58.350 37.037 6.75 0.00 31.50 3.10
3012 3640 9.874205 GAAAAATCCTCTCATATCTCTATCTGG 57.126 37.037 0.00 0.00 0.00 3.86
3013 3641 7.976414 AAATCCTCTCATATCTCTATCTGGG 57.024 40.000 0.00 0.00 0.00 4.45
3014 3642 6.672946 ATCCTCTCATATCTCTATCTGGGT 57.327 41.667 0.00 0.00 0.00 4.51
3015 3643 6.073447 TCCTCTCATATCTCTATCTGGGTC 57.927 45.833 0.00 0.00 0.00 4.46
3016 3644 5.553557 TCCTCTCATATCTCTATCTGGGTCA 59.446 44.000 0.00 0.00 0.00 4.02
3017 3645 5.887598 CCTCTCATATCTCTATCTGGGTCAG 59.112 48.000 0.00 0.00 0.00 3.51
3018 3646 6.461577 TCTCATATCTCTATCTGGGTCAGT 57.538 41.667 0.00 0.00 32.61 3.41
3019 3647 6.857848 TCTCATATCTCTATCTGGGTCAGTT 58.142 40.000 0.00 0.00 32.61 3.16
3020 3648 6.718912 TCTCATATCTCTATCTGGGTCAGTTG 59.281 42.308 0.00 0.00 32.61 3.16
3021 3649 5.777223 TCATATCTCTATCTGGGTCAGTTGG 59.223 44.000 0.00 0.00 32.61 3.77
3022 3650 3.757947 TCTCTATCTGGGTCAGTTGGA 57.242 47.619 0.00 0.00 32.61 3.53
3023 3651 3.366396 TCTCTATCTGGGTCAGTTGGAC 58.634 50.000 0.00 0.00 46.20 4.02
3036 3664 2.611974 GTTGGACAAACTATGCGTGG 57.388 50.000 0.00 0.00 35.75 4.94
3037 3665 0.878416 TTGGACAAACTATGCGTGGC 59.122 50.000 0.00 0.00 0.00 5.01
3038 3666 0.958382 TGGACAAACTATGCGTGGCC 60.958 55.000 0.00 0.00 41.23 5.36
3039 3667 1.423845 GACAAACTATGCGTGGCCG 59.576 57.895 0.00 0.00 37.07 6.13
3040 3668 1.977594 GACAAACTATGCGTGGCCGG 61.978 60.000 0.00 0.00 33.68 6.13
3041 3669 2.038269 CAAACTATGCGTGGCCGGT 61.038 57.895 1.90 0.00 33.68 5.28
3042 3670 1.302993 AAACTATGCGTGGCCGGTT 60.303 52.632 1.90 0.00 33.68 4.44
3043 3671 1.582610 AAACTATGCGTGGCCGGTTG 61.583 55.000 1.90 0.00 33.68 3.77
3044 3672 3.202001 CTATGCGTGGCCGGTTGG 61.202 66.667 1.90 0.00 38.77 3.77
3054 3682 3.808036 CCGGTTGGCAGGTTATCG 58.192 61.111 0.00 0.00 0.00 2.92
3055 3683 1.219664 CCGGTTGGCAGGTTATCGA 59.780 57.895 0.00 0.00 0.00 3.59
3056 3684 1.087771 CCGGTTGGCAGGTTATCGAC 61.088 60.000 0.00 0.00 0.00 4.20
3057 3685 0.390603 CGGTTGGCAGGTTATCGACA 60.391 55.000 0.00 0.00 0.00 4.35
3058 3686 1.816074 GGTTGGCAGGTTATCGACAA 58.184 50.000 0.00 0.00 0.00 3.18
3059 3687 2.365582 GGTTGGCAGGTTATCGACAAT 58.634 47.619 0.00 0.00 0.00 2.71
3060 3688 2.752903 GGTTGGCAGGTTATCGACAATT 59.247 45.455 0.00 0.00 0.00 2.32
3061 3689 3.192633 GGTTGGCAGGTTATCGACAATTT 59.807 43.478 0.00 0.00 0.00 1.82
3062 3690 4.321675 GGTTGGCAGGTTATCGACAATTTT 60.322 41.667 0.00 0.00 0.00 1.82
3063 3691 5.106078 GGTTGGCAGGTTATCGACAATTTTA 60.106 40.000 0.00 0.00 0.00 1.52
3064 3692 6.405397 GGTTGGCAGGTTATCGACAATTTTAT 60.405 38.462 0.00 0.00 0.00 1.40
3065 3693 6.767524 TGGCAGGTTATCGACAATTTTATT 57.232 33.333 0.00 0.00 0.00 1.40
3066 3694 7.164230 TGGCAGGTTATCGACAATTTTATTT 57.836 32.000 0.00 0.00 0.00 1.40
3067 3695 7.607250 TGGCAGGTTATCGACAATTTTATTTT 58.393 30.769 0.00 0.00 0.00 1.82
3068 3696 7.543868 TGGCAGGTTATCGACAATTTTATTTTG 59.456 33.333 0.00 0.00 0.00 2.44
3069 3697 7.544217 GGCAGGTTATCGACAATTTTATTTTGT 59.456 33.333 0.00 0.00 39.91 2.83
3070 3698 8.372521 GCAGGTTATCGACAATTTTATTTTGTG 58.627 33.333 0.00 0.00 37.43 3.33
3071 3699 8.372521 CAGGTTATCGACAATTTTATTTTGTGC 58.627 33.333 0.00 0.00 37.43 4.57
3072 3700 8.303876 AGGTTATCGACAATTTTATTTTGTGCT 58.696 29.630 0.00 0.00 37.43 4.40
3073 3701 9.562583 GGTTATCGACAATTTTATTTTGTGCTA 57.437 29.630 0.00 0.00 37.43 3.49
3075 3703 7.740519 ATCGACAATTTTATTTTGTGCTAGC 57.259 32.000 8.10 8.10 37.43 3.42
3076 3704 6.908825 TCGACAATTTTATTTTGTGCTAGCT 58.091 32.000 17.23 0.00 37.43 3.32
3077 3705 7.021196 TCGACAATTTTATTTTGTGCTAGCTC 58.979 34.615 17.23 13.38 37.43 4.09
3078 3706 7.023575 CGACAATTTTATTTTGTGCTAGCTCT 58.976 34.615 17.23 0.00 37.43 4.09
3079 3707 7.217070 CGACAATTTTATTTTGTGCTAGCTCTC 59.783 37.037 17.23 7.19 37.43 3.20
3080 3708 7.315890 ACAATTTTATTTTGTGCTAGCTCTCC 58.684 34.615 17.23 1.90 36.02 3.71
3081 3709 5.545658 TTTTATTTTGTGCTAGCTCTCCG 57.454 39.130 17.23 0.00 0.00 4.63
3082 3710 2.029838 ATTTTGTGCTAGCTCTCCGG 57.970 50.000 17.23 0.00 0.00 5.14
3083 3711 0.973632 TTTTGTGCTAGCTCTCCGGA 59.026 50.000 17.23 2.93 0.00 5.14
3084 3712 0.246635 TTTGTGCTAGCTCTCCGGAC 59.753 55.000 17.23 4.14 0.00 4.79
3085 3713 1.605058 TTGTGCTAGCTCTCCGGACC 61.605 60.000 17.23 0.00 0.00 4.46
3086 3714 1.755008 GTGCTAGCTCTCCGGACCT 60.755 63.158 17.23 0.00 0.00 3.85
3087 3715 0.465824 GTGCTAGCTCTCCGGACCTA 60.466 60.000 17.23 0.52 0.00 3.08
3088 3716 0.179015 TGCTAGCTCTCCGGACCTAG 60.179 60.000 17.23 18.28 33.25 3.02
3089 3717 0.891904 GCTAGCTCTCCGGACCTAGG 60.892 65.000 21.56 7.41 31.66 3.02
3090 3718 0.891904 CTAGCTCTCCGGACCTAGGC 60.892 65.000 9.30 1.17 28.90 3.93
3091 3719 2.354755 TAGCTCTCCGGACCTAGGCC 62.355 65.000 9.30 10.43 0.00 5.19
3092 3720 2.279073 CTCTCCGGACCTAGGCCA 59.721 66.667 9.30 0.00 0.00 5.36
3093 3721 2.043248 TCTCCGGACCTAGGCCAC 60.043 66.667 9.30 0.25 0.00 5.01
3094 3722 2.363795 CTCCGGACCTAGGCCACA 60.364 66.667 9.30 0.00 0.00 4.17
3095 3723 2.363795 TCCGGACCTAGGCCACAG 60.364 66.667 9.30 0.45 0.00 3.66
3096 3724 2.683933 CCGGACCTAGGCCACAGT 60.684 66.667 9.30 0.00 0.00 3.55
3097 3725 2.579201 CGGACCTAGGCCACAGTG 59.421 66.667 9.30 0.00 0.00 3.66
3098 3726 2.269241 GGACCTAGGCCACAGTGC 59.731 66.667 9.30 0.00 0.00 4.40
3099 3727 2.125512 GACCTAGGCCACAGTGCG 60.126 66.667 9.30 0.00 0.00 5.34
3100 3728 4.394712 ACCTAGGCCACAGTGCGC 62.395 66.667 9.30 0.00 0.00 6.09
3101 3729 4.087892 CCTAGGCCACAGTGCGCT 62.088 66.667 9.73 0.00 0.00 5.92
3117 3745 3.710722 CTGCGAGGTGGGCTTCCT 61.711 66.667 1.10 1.10 38.09 3.36
3118 3746 3.249189 TGCGAGGTGGGCTTCCTT 61.249 61.111 2.97 0.00 35.20 3.36
3119 3747 2.436824 GCGAGGTGGGCTTCCTTC 60.437 66.667 2.97 0.00 35.20 3.46
3120 3748 3.068881 CGAGGTGGGCTTCCTTCA 58.931 61.111 2.97 0.00 35.20 3.02
3121 3749 1.078848 CGAGGTGGGCTTCCTTCAG 60.079 63.158 2.97 0.00 35.20 3.02
3122 3750 1.831652 CGAGGTGGGCTTCCTTCAGT 61.832 60.000 2.97 0.00 35.20 3.41
3123 3751 0.322008 GAGGTGGGCTTCCTTCAGTG 60.322 60.000 2.97 0.00 35.20 3.66
3124 3752 1.303643 GGTGGGCTTCCTTCAGTGG 60.304 63.158 0.00 0.00 0.00 4.00
3125 3753 1.303643 GTGGGCTTCCTTCAGTGGG 60.304 63.158 0.00 0.00 0.00 4.61
3126 3754 2.361737 GGGCTTCCTTCAGTGGGC 60.362 66.667 0.00 0.00 0.00 5.36
3127 3755 2.361737 GGCTTCCTTCAGTGGGCC 60.362 66.667 0.00 0.00 0.00 5.80
3128 3756 2.436109 GCTTCCTTCAGTGGGCCA 59.564 61.111 0.00 0.00 0.00 5.36
3129 3757 1.228552 GCTTCCTTCAGTGGGCCAA 60.229 57.895 8.40 0.00 0.00 4.52
3130 3758 0.827507 GCTTCCTTCAGTGGGCCAAA 60.828 55.000 8.40 0.00 0.00 3.28
3131 3759 1.703411 CTTCCTTCAGTGGGCCAAAA 58.297 50.000 8.40 2.01 0.00 2.44
3132 3760 1.341209 CTTCCTTCAGTGGGCCAAAAC 59.659 52.381 8.40 0.00 0.00 2.43
3133 3761 0.821711 TCCTTCAGTGGGCCAAAACG 60.822 55.000 8.40 0.00 0.00 3.60
3134 3762 1.659794 CTTCAGTGGGCCAAAACGG 59.340 57.895 8.40 0.00 38.11 4.44
3135 3763 1.805428 CTTCAGTGGGCCAAAACGGG 61.805 60.000 8.40 0.00 34.06 5.28
3136 3764 2.520741 CAGTGGGCCAAAACGGGT 60.521 61.111 8.40 0.00 34.06 5.28
3137 3765 2.520741 AGTGGGCCAAAACGGGTG 60.521 61.111 8.40 0.00 34.06 4.61
3138 3766 3.611674 GTGGGCCAAAACGGGTGG 61.612 66.667 8.40 0.00 39.33 4.61
3143 3771 3.532501 CCAAAACGGGTGGCAAGT 58.467 55.556 0.00 0.00 0.00 3.16
3144 3772 2.721945 CCAAAACGGGTGGCAAGTA 58.278 52.632 0.00 0.00 0.00 2.24
3145 3773 1.033574 CCAAAACGGGTGGCAAGTAA 58.966 50.000 0.00 0.00 0.00 2.24
3146 3774 1.269361 CCAAAACGGGTGGCAAGTAAC 60.269 52.381 0.00 0.00 0.00 2.50
3147 3775 1.405821 CAAAACGGGTGGCAAGTAACA 59.594 47.619 0.00 0.00 0.00 2.41
3148 3776 1.765230 AAACGGGTGGCAAGTAACAA 58.235 45.000 0.00 0.00 0.00 2.83
3149 3777 1.765230 AACGGGTGGCAAGTAACAAA 58.235 45.000 0.00 0.00 0.00 2.83
3150 3778 1.765230 ACGGGTGGCAAGTAACAAAA 58.235 45.000 0.00 0.00 0.00 2.44
3151 3779 1.406180 ACGGGTGGCAAGTAACAAAAC 59.594 47.619 0.00 0.00 0.00 2.43
3152 3780 1.269361 CGGGTGGCAAGTAACAAAACC 60.269 52.381 0.00 0.00 0.00 3.27
3153 3781 1.757699 GGGTGGCAAGTAACAAAACCA 59.242 47.619 0.00 0.00 0.00 3.67
3154 3782 2.223947 GGGTGGCAAGTAACAAAACCAG 60.224 50.000 0.00 0.00 0.00 4.00
3155 3783 2.691011 GGTGGCAAGTAACAAAACCAGA 59.309 45.455 0.00 0.00 0.00 3.86
3156 3784 3.320826 GGTGGCAAGTAACAAAACCAGAT 59.679 43.478 0.00 0.00 0.00 2.90
3157 3785 4.521256 GGTGGCAAGTAACAAAACCAGATA 59.479 41.667 0.00 0.00 0.00 1.98
3158 3786 5.335661 GGTGGCAAGTAACAAAACCAGATAG 60.336 44.000 0.00 0.00 0.00 2.08
3159 3787 4.217550 TGGCAAGTAACAAAACCAGATAGC 59.782 41.667 0.00 0.00 0.00 2.97
3160 3788 4.403453 GCAAGTAACAAAACCAGATAGCG 58.597 43.478 0.00 0.00 0.00 4.26
3161 3789 4.083484 GCAAGTAACAAAACCAGATAGCGT 60.083 41.667 0.00 0.00 0.00 5.07
3162 3790 5.121142 GCAAGTAACAAAACCAGATAGCGTA 59.879 40.000 0.00 0.00 0.00 4.42
3163 3791 6.531439 CAAGTAACAAAACCAGATAGCGTAC 58.469 40.000 0.00 0.00 0.00 3.67
3164 3792 4.860907 AGTAACAAAACCAGATAGCGTACG 59.139 41.667 11.84 11.84 0.00 3.67
3165 3793 3.308438 ACAAAACCAGATAGCGTACGT 57.692 42.857 17.90 6.37 0.00 3.57
3166 3794 3.656559 ACAAAACCAGATAGCGTACGTT 58.343 40.909 17.90 14.06 0.00 3.99
3167 3795 4.808558 ACAAAACCAGATAGCGTACGTTA 58.191 39.130 17.90 16.05 0.00 3.18
3168 3796 5.229423 ACAAAACCAGATAGCGTACGTTAA 58.771 37.500 15.87 2.42 0.00 2.01
3169 3797 5.695816 ACAAAACCAGATAGCGTACGTTAAA 59.304 36.000 15.87 0.00 0.00 1.52
3170 3798 6.369615 ACAAAACCAGATAGCGTACGTTAAAT 59.630 34.615 15.87 1.27 0.00 1.40
3171 3799 6.973229 AAACCAGATAGCGTACGTTAAATT 57.027 33.333 15.87 0.00 0.00 1.82
3172 3800 8.382130 CAAAACCAGATAGCGTACGTTAAATTA 58.618 33.333 15.87 0.00 0.00 1.40
3173 3801 8.477984 AAACCAGATAGCGTACGTTAAATTAA 57.522 30.769 15.87 0.00 0.00 1.40
3174 3802 8.652810 AACCAGATAGCGTACGTTAAATTAAT 57.347 30.769 15.87 0.00 0.00 1.40
3175 3803 8.652810 ACCAGATAGCGTACGTTAAATTAATT 57.347 30.769 15.87 0.00 0.00 1.40
3176 3804 8.545420 ACCAGATAGCGTACGTTAAATTAATTG 58.455 33.333 15.87 6.83 0.00 2.32
3177 3805 8.757789 CCAGATAGCGTACGTTAAATTAATTGA 58.242 33.333 15.87 0.00 0.00 2.57
3181 3809 7.694791 AGCGTACGTTAAATTAATTGAAACG 57.305 32.000 29.21 29.21 41.63 3.60
3182 3810 6.737750 AGCGTACGTTAAATTAATTGAAACGG 59.262 34.615 31.50 22.55 40.89 4.44
3183 3811 6.022329 GCGTACGTTAAATTAATTGAAACGGG 60.022 38.462 31.50 25.04 40.89 5.28
3184 3812 7.232994 CGTACGTTAAATTAATTGAAACGGGA 58.767 34.615 31.50 23.32 40.89 5.14
3185 3813 7.214263 CGTACGTTAAATTAATTGAAACGGGAC 59.786 37.037 31.50 27.83 40.89 4.46
3186 3814 6.380995 ACGTTAAATTAATTGAAACGGGACC 58.619 36.000 31.50 10.10 40.89 4.46
3187 3815 6.016443 ACGTTAAATTAATTGAAACGGGACCA 60.016 34.615 31.50 0.69 40.89 4.02
3188 3816 6.862090 CGTTAAATTAATTGAAACGGGACCAA 59.138 34.615 26.25 0.00 36.83 3.67
3189 3817 7.061326 CGTTAAATTAATTGAAACGGGACCAAG 59.939 37.037 26.25 8.88 36.83 3.61
3190 3818 6.413783 AAATTAATTGAAACGGGACCAAGT 57.586 33.333 0.39 0.00 0.00 3.16
3191 3819 4.839668 TTAATTGAAACGGGACCAAGTG 57.160 40.909 0.00 0.00 0.00 3.16
3192 3820 2.649531 ATTGAAACGGGACCAAGTGA 57.350 45.000 0.00 0.00 0.00 3.41
3193 3821 2.421751 TTGAAACGGGACCAAGTGAA 57.578 45.000 0.00 0.00 0.00 3.18
3194 3822 1.961793 TGAAACGGGACCAAGTGAAG 58.038 50.000 0.00 0.00 0.00 3.02
3195 3823 0.591659 GAAACGGGACCAAGTGAAGC 59.408 55.000 0.00 0.00 0.00 3.86
3196 3824 1.164041 AAACGGGACCAAGTGAAGCG 61.164 55.000 0.00 0.00 0.00 4.68
3197 3825 2.742372 CGGGACCAAGTGAAGCGG 60.742 66.667 0.00 0.00 0.00 5.52
3198 3826 2.359975 GGGACCAAGTGAAGCGGG 60.360 66.667 0.00 0.00 0.00 6.13
3199 3827 2.747686 GGACCAAGTGAAGCGGGA 59.252 61.111 0.00 0.00 0.00 5.14
3200 3828 1.671379 GGACCAAGTGAAGCGGGAC 60.671 63.158 0.00 0.00 0.00 4.46
3218 3846 5.674933 GGGACGAAACCAAGAATATCATC 57.325 43.478 0.00 0.00 0.00 2.92
3219 3847 5.368989 GGGACGAAACCAAGAATATCATCT 58.631 41.667 0.00 0.00 0.00 2.90
3220 3848 5.467063 GGGACGAAACCAAGAATATCATCTC 59.533 44.000 0.00 0.00 0.00 2.75
3221 3849 5.467063 GGACGAAACCAAGAATATCATCTCC 59.533 44.000 0.00 0.00 0.00 3.71
3222 3850 5.368989 ACGAAACCAAGAATATCATCTCCC 58.631 41.667 0.00 0.00 0.00 4.30
3223 3851 5.131142 ACGAAACCAAGAATATCATCTCCCT 59.869 40.000 0.00 0.00 0.00 4.20
3224 3852 6.058183 CGAAACCAAGAATATCATCTCCCTT 58.942 40.000 0.00 0.00 0.00 3.95
3225 3853 6.543831 CGAAACCAAGAATATCATCTCCCTTT 59.456 38.462 0.00 0.00 0.00 3.11
3226 3854 7.715249 CGAAACCAAGAATATCATCTCCCTTTA 59.285 37.037 0.00 0.00 0.00 1.85
3227 3855 9.408648 GAAACCAAGAATATCATCTCCCTTTAA 57.591 33.333 0.00 0.00 0.00 1.52
3228 3856 9.942526 AAACCAAGAATATCATCTCCCTTTAAT 57.057 29.630 0.00 0.00 0.00 1.40
3346 3976 7.765695 ATGCAACCTATGAAAGAAAGAAGAA 57.234 32.000 0.00 0.00 0.00 2.52
3356 3986 6.055588 TGAAAGAAAGAAGAAATGTCCGACT 58.944 36.000 0.00 0.00 0.00 4.18
3397 4027 1.893801 CAAGTCCTACCCTCTTCGTGT 59.106 52.381 0.00 0.00 0.00 4.49
3401 4031 2.290093 GTCCTACCCTCTTCGTGTATCG 59.710 54.545 0.00 0.00 41.41 2.92
3405 4036 1.278238 CCCTCTTCGTGTATCGTTGC 58.722 55.000 0.00 0.00 40.80 4.17
3429 4060 1.965643 ACGGCCACAGTTGAAGTAGTA 59.034 47.619 2.24 0.00 0.00 1.82
3440 4071 2.958818 TGAAGTAGTAGCCCCATCGAT 58.041 47.619 0.00 0.00 0.00 3.59
3449 4080 2.050144 AGCCCCATCGATCACAATAGT 58.950 47.619 0.00 0.00 0.00 2.12
3472 4103 1.339535 TGCGGTGTTTCCATATCTGCA 60.340 47.619 0.00 0.00 37.94 4.41
3520 4151 4.482386 GAAATCTTTCCGTAAAGTTGCCC 58.518 43.478 0.08 0.00 42.36 5.36
3529 4160 1.787057 TAAAGTTGCCCGTGGTTGCG 61.787 55.000 0.00 0.00 0.00 4.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
47 48 0.109342 ATCCATGAGGGTCGGCAATC 59.891 55.000 0.00 0.00 38.11 2.67
55 56 2.174210 CAATGGTCAGATCCATGAGGGT 59.826 50.000 0.00 0.00 46.14 4.34
69 70 0.245539 TCCGGAACTCGTCAATGGTC 59.754 55.000 0.00 0.00 37.11 4.02
70 71 0.682852 TTCCGGAACTCGTCAATGGT 59.317 50.000 14.35 0.00 37.11 3.55
78 79 4.110493 GGAGCATTCCGGAACTCG 57.890 61.111 21.56 12.36 32.79 4.18
122 123 2.646930 CAATCCAGCAATCTACAGGCA 58.353 47.619 0.00 0.00 0.00 4.75
125 126 3.819337 CCATCCAATCCAGCAATCTACAG 59.181 47.826 0.00 0.00 0.00 2.74
126 127 3.435457 CCCATCCAATCCAGCAATCTACA 60.435 47.826 0.00 0.00 0.00 2.74
137 138 3.254166 CACGATTGAATCCCATCCAATCC 59.746 47.826 0.00 0.00 41.67 3.01
147 148 0.451783 GGGTGCACACGATTGAATCC 59.548 55.000 20.43 2.18 0.00 3.01
153 154 0.467290 AAACAGGGGTGCACACGATT 60.467 50.000 20.43 7.25 0.00 3.34
154 155 0.467290 AAAACAGGGGTGCACACGAT 60.467 50.000 20.43 4.09 0.00 3.73
169 170 1.877443 TGAAGCAACTCGGGCTAAAAC 59.123 47.619 0.00 0.00 41.66 2.43
173 174 1.080093 CGTGAAGCAACTCGGGCTA 60.080 57.895 0.00 0.00 41.66 3.93
183 184 1.522806 GTCACACCCACGTGAAGCA 60.523 57.895 19.30 0.00 46.99 3.91
190 191 3.403057 CTTCGCGTCACACCCACG 61.403 66.667 5.77 0.00 40.35 4.94
192 193 2.981977 GAACCTTCGCGTCACACCCA 62.982 60.000 5.77 0.00 0.00 4.51
195 196 2.844146 CGAACCTTCGCGTCACAC 59.156 61.111 5.77 0.00 44.26 3.82
208 209 0.951558 AATGTCAACAGGCACCGAAC 59.048 50.000 0.00 0.00 0.00 3.95
231 232 4.025145 GGAAATCGAAATACCGACATGTCC 60.025 45.833 20.03 3.24 41.70 4.02
239 240 3.874543 TCACCATGGAAATCGAAATACCG 59.125 43.478 21.47 0.00 0.00 4.02
241 242 6.093495 TGTCTTCACCATGGAAATCGAAATAC 59.907 38.462 21.47 12.57 0.00 1.89
265 266 1.079819 ATGACGTTCTCCGCCACTG 60.080 57.895 0.00 0.00 41.42 3.66
268 269 2.264480 CCATGACGTTCTCCGCCA 59.736 61.111 0.00 0.00 41.42 5.69
296 297 4.646572 GATCCTCCATTACAAGGCCTTAG 58.353 47.826 20.00 15.05 32.37 2.18
297 298 3.071023 CGATCCTCCATTACAAGGCCTTA 59.929 47.826 20.00 2.57 32.37 2.69
298 299 2.158755 CGATCCTCCATTACAAGGCCTT 60.159 50.000 13.78 13.78 32.37 4.35
305 306 4.466370 ACAAAGACTCGATCCTCCATTACA 59.534 41.667 0.00 0.00 0.00 2.41
312 313 3.320673 AACCACAAAGACTCGATCCTC 57.679 47.619 0.00 0.00 0.00 3.71
313 314 4.466370 TCATAACCACAAAGACTCGATCCT 59.534 41.667 0.00 0.00 0.00 3.24
326 327 4.759693 CCAAGCAAAGTACTCATAACCACA 59.240 41.667 0.00 0.00 0.00 4.17
331 332 6.092122 CGAATCACCAAGCAAAGTACTCATAA 59.908 38.462 0.00 0.00 0.00 1.90
332 333 5.580691 CGAATCACCAAGCAAAGTACTCATA 59.419 40.000 0.00 0.00 0.00 2.15
338 339 3.496884 GTCACGAATCACCAAGCAAAGTA 59.503 43.478 0.00 0.00 0.00 2.24
344 345 0.716108 CGAGTCACGAATCACCAAGC 59.284 55.000 0.00 0.00 45.77 4.01
363 364 1.709147 CCTGCCGATGTTGCTGCTAC 61.709 60.000 7.29 7.29 0.00 3.58
381 382 4.531426 TGTGTTGCCACCCCCACC 62.531 66.667 0.00 0.00 41.09 4.61
382 383 2.443016 TTGTGTTGCCACCCCCAC 60.443 61.111 0.00 0.00 41.09 4.61
383 384 2.123511 CTTGTGTTGCCACCCCCA 60.124 61.111 0.00 0.00 41.09 4.96
384 385 2.123468 ACTTGTGTTGCCACCCCC 60.123 61.111 0.00 0.00 41.09 5.40
385 386 2.498056 CCACTTGTGTTGCCACCCC 61.498 63.158 0.00 0.00 41.09 4.95
389 390 2.949177 ATACTCCACTTGTGTTGCCA 57.051 45.000 0.00 0.00 0.00 4.92
394 395 8.056400 AGATAAGACTCTATACTCCACTTGTGT 58.944 37.037 0.00 0.00 0.00 3.72
403 404 8.573035 CACCCTGAAAGATAAGACTCTATACTC 58.427 40.741 0.00 0.00 34.07 2.59
407 408 7.979786 TTCACCCTGAAAGATAAGACTCTAT 57.020 36.000 0.00 0.00 32.71 1.98
408 409 7.455008 AGTTTCACCCTGAAAGATAAGACTCTA 59.545 37.037 0.00 0.00 45.83 2.43
409 410 6.271159 AGTTTCACCCTGAAAGATAAGACTCT 59.729 38.462 0.00 0.00 45.83 3.24
418 419 4.792068 ACATTGAGTTTCACCCTGAAAGA 58.208 39.130 0.00 0.00 45.83 2.52
425 426 1.541588 GCCAGACATTGAGTTTCACCC 59.458 52.381 0.00 0.00 0.00 4.61
434 436 4.046286 ACCAATTAAGGCCAGACATTGA 57.954 40.909 5.01 0.00 0.00 2.57
438 440 2.890311 CACAACCAATTAAGGCCAGACA 59.110 45.455 5.01 0.00 0.00 3.41
460 462 0.179020 TCAACAAGGTCACTGCCAGG 60.179 55.000 0.00 0.00 0.00 4.45
482 484 1.266718 TCCACGCTCTCAAAACAATGC 59.733 47.619 0.00 0.00 0.00 3.56
495 497 1.846007 ACTCTGAGAAGATCCACGCT 58.154 50.000 12.44 0.00 0.00 5.07
497 499 5.348997 GGTTTTTACTCTGAGAAGATCCACG 59.651 44.000 12.44 0.00 0.00 4.94
499 501 6.688073 AGGTTTTTACTCTGAGAAGATCCA 57.312 37.500 12.44 0.00 0.00 3.41
503 505 9.315363 AGATCTTAGGTTTTTACTCTGAGAAGA 57.685 33.333 12.44 6.87 29.24 2.87
512 520 9.853177 CCCAATCATAGATCTTAGGTTTTTACT 57.147 33.333 0.00 0.00 0.00 2.24
515 523 6.263168 CGCCCAATCATAGATCTTAGGTTTTT 59.737 38.462 0.00 0.00 0.00 1.94
517 525 5.071788 TCGCCCAATCATAGATCTTAGGTTT 59.928 40.000 0.00 0.00 0.00 3.27
525 533 2.926200 CGTCATCGCCCAATCATAGATC 59.074 50.000 0.00 0.00 0.00 2.75
532 540 0.882042 AGCATCGTCATCGCCCAATC 60.882 55.000 0.00 0.00 36.96 2.67
535 543 1.815003 CAAGCATCGTCATCGCCCA 60.815 57.895 0.00 0.00 36.96 5.36
568 576 0.386858 TCGAAAGCGACGTCTCCAAG 60.387 55.000 14.70 0.00 42.51 3.61
596 604 2.094649 CACCTAGACAACTCCCGAAGTC 60.095 54.545 0.00 0.00 37.17 3.01
605 613 1.349067 GGACCACCACCTAGACAACT 58.651 55.000 0.00 0.00 35.97 3.16
607 615 0.470456 ACGGACCACCACCTAGACAA 60.470 55.000 0.00 0.00 35.59 3.18
623 631 0.950555 TTCTTGTAGCTGCAGCACGG 60.951 55.000 38.24 25.84 45.16 4.94
624 632 0.867746 TTTCTTGTAGCTGCAGCACG 59.132 50.000 38.24 20.99 45.16 5.34
625 633 3.058016 TCAATTTCTTGTAGCTGCAGCAC 60.058 43.478 38.24 30.69 37.29 4.40
637 645 4.556135 CACGCTGCAGTAATCAATTTCTTG 59.444 41.667 16.64 0.00 0.00 3.02
678 691 9.153721 CAGATGCACACAACCAAAAATAATAAT 57.846 29.630 0.00 0.00 0.00 1.28
681 694 6.523840 ACAGATGCACACAACCAAAAATAAT 58.476 32.000 0.00 0.00 0.00 1.28
691 704 4.488126 ACACATTACAGATGCACACAAC 57.512 40.909 0.00 0.00 0.00 3.32
692 705 5.512753 AAACACATTACAGATGCACACAA 57.487 34.783 0.00 0.00 0.00 3.33
711 731 2.150424 GCAACAACGCAATGTCGTAAAC 59.850 45.455 3.49 0.00 42.46 2.01
718 738 1.002468 GTCTCTGCAACAACGCAATGT 60.002 47.619 0.00 0.00 42.45 2.71
719 739 1.664016 GGTCTCTGCAACAACGCAATG 60.664 52.381 0.00 0.00 42.45 2.82
725 745 1.400242 GCATTCGGTCTCTGCAACAAC 60.400 52.381 0.00 0.00 35.96 3.32
739 759 3.605461 CGCAGAGATACCAATTGCATTCG 60.605 47.826 0.00 0.00 34.56 3.34
741 761 3.544684 TCGCAGAGATACCAATTGCATT 58.455 40.909 0.00 0.00 34.56 3.56
814 834 3.181497 ACGATTCTGCCATTGAAAATCCG 60.181 43.478 0.00 0.00 0.00 4.18
816 836 4.107622 CCACGATTCTGCCATTGAAAATC 58.892 43.478 0.00 0.00 0.00 2.17
824 844 1.153086 GAGCCCACGATTCTGCCAT 60.153 57.895 0.00 0.00 0.00 4.40
826 846 1.686325 TAGGAGCCCACGATTCTGCC 61.686 60.000 0.00 0.00 0.00 4.85
830 850 4.602340 TTATTCTAGGAGCCCACGATTC 57.398 45.455 0.00 0.00 0.00 2.52
835 855 2.373502 AGCCATTATTCTAGGAGCCCAC 59.626 50.000 0.00 0.00 0.00 4.61
839 859 4.836825 TGCATAGCCATTATTCTAGGAGC 58.163 43.478 0.00 0.00 0.00 4.70
840 860 6.257411 CGAATGCATAGCCATTATTCTAGGAG 59.743 42.308 0.00 0.00 35.67 3.69
841 861 6.108687 CGAATGCATAGCCATTATTCTAGGA 58.891 40.000 0.00 0.00 35.67 2.94
843 863 5.220739 GCCGAATGCATAGCCATTATTCTAG 60.221 44.000 0.00 0.00 40.77 2.43
854 881 4.374702 CCGCGCCGAATGCATAGC 62.375 66.667 0.00 2.63 41.33 2.97
856 883 3.268603 CACCGCGCCGAATGCATA 61.269 61.111 0.00 0.00 41.33 3.14
868 895 1.285950 GGCTTTCTTCAACCACCGC 59.714 57.895 0.00 0.00 0.00 5.68
940 999 2.597510 GTGTTTTCCAGCCGCCCT 60.598 61.111 0.00 0.00 0.00 5.19
979 1062 0.531753 GCCCCTTCTCGATTCTGCTC 60.532 60.000 0.00 0.00 0.00 4.26
1341 1458 0.101759 TATGCGGCGTACACTTCCTC 59.898 55.000 9.37 0.00 0.00 3.71
1507 1642 5.056480 TCTTGCTCCAATACAATACCATCG 58.944 41.667 0.00 0.00 0.00 3.84
1582 1736 2.867975 GTCACAACGAATATAACCCCCG 59.132 50.000 0.00 0.00 0.00 5.73
1616 1828 1.416813 GAGGTGCTCGATGAAGTGCG 61.417 60.000 0.00 0.00 33.76 5.34
1666 1879 0.537188 AACTCGACATCCGCCTCATT 59.463 50.000 0.00 0.00 38.37 2.57
1687 1900 0.032952 CTGGCACTGCACAGCATTTT 59.967 50.000 2.82 0.00 38.13 1.82
1689 1902 3.362262 CTGGCACTGCACAGCATT 58.638 55.556 2.82 0.00 38.13 3.56
1797 2019 3.131046 TGAACATTGCGCTCTCTATCAGA 59.869 43.478 9.73 0.00 0.00 3.27
1911 2142 6.515832 AGGAATTCCACATGAAAACAAGTTC 58.484 36.000 26.22 0.00 36.33 3.01
2082 2387 9.118300 GTACTAAGCAATGACTCTAGTAGGTAA 57.882 37.037 0.00 0.00 0.00 2.85
2107 2412 7.199766 TGCGAAAAACATTGAAGTTTGATAGT 58.800 30.769 0.00 0.00 40.60 2.12
2108 2413 7.621832 TGCGAAAAACATTGAAGTTTGATAG 57.378 32.000 0.00 0.00 40.60 2.08
2109 2414 7.651304 ACATGCGAAAAACATTGAAGTTTGATA 59.349 29.630 0.00 0.00 40.60 2.15
2168 2502 8.928448 AGCTCACCAGTCTGAATTTTAGATATA 58.072 33.333 0.00 0.00 0.00 0.86
2174 2508 4.756642 CACAGCTCACCAGTCTGAATTTTA 59.243 41.667 0.00 0.00 31.72 1.52
2181 2515 0.678395 AGACACAGCTCACCAGTCTG 59.322 55.000 0.00 0.00 38.08 3.51
2216 2583 3.882888 CAGTCCAAACAAGCCTAGTTTCA 59.117 43.478 0.00 0.00 37.10 2.69
2239 2619 5.691305 GCAAACTGTGTGCAGAATTAATTGA 59.309 36.000 17.83 0.00 45.28 2.57
2315 2702 4.514288 TCCTAGAGGCCCTTCTAGATCTA 58.486 47.826 24.12 11.14 46.24 1.98
2585 3109 2.027192 ACAATGTACCTGTGCTCCGATT 60.027 45.455 0.00 0.00 0.00 3.34
2623 3182 8.694540 CAAATGATGGTATGGAATTCAACCTAA 58.305 33.333 18.96 9.29 32.99 2.69
2634 3227 3.721575 ACCTAGGCAAATGATGGTATGGA 59.278 43.478 9.30 0.00 0.00 3.41
2635 3228 4.074970 GACCTAGGCAAATGATGGTATGG 58.925 47.826 9.30 0.00 0.00 2.74
2636 3229 3.748048 CGACCTAGGCAAATGATGGTATG 59.252 47.826 9.30 0.00 0.00 2.39
2637 3230 3.646162 TCGACCTAGGCAAATGATGGTAT 59.354 43.478 9.30 0.00 0.00 2.73
2638 3231 3.035363 TCGACCTAGGCAAATGATGGTA 58.965 45.455 9.30 0.00 0.00 3.25
2639 3232 1.837439 TCGACCTAGGCAAATGATGGT 59.163 47.619 9.30 0.00 0.00 3.55
2640 3233 2.620251 TCGACCTAGGCAAATGATGG 57.380 50.000 9.30 0.00 0.00 3.51
2641 3234 3.304257 GCATTCGACCTAGGCAAATGATG 60.304 47.826 24.78 16.03 30.64 3.07
2642 3235 2.880890 GCATTCGACCTAGGCAAATGAT 59.119 45.455 24.78 6.41 30.64 2.45
2643 3236 2.092968 AGCATTCGACCTAGGCAAATGA 60.093 45.455 24.78 9.34 30.64 2.57
2644 3237 2.292267 AGCATTCGACCTAGGCAAATG 58.708 47.619 19.68 19.68 0.00 2.32
2645 3238 2.684881 CAAGCATTCGACCTAGGCAAAT 59.315 45.455 9.30 3.30 0.00 2.32
2646 3239 2.083774 CAAGCATTCGACCTAGGCAAA 58.916 47.619 9.30 0.65 0.00 3.68
2647 3240 1.277842 TCAAGCATTCGACCTAGGCAA 59.722 47.619 9.30 0.00 0.00 4.52
2648 3241 0.901827 TCAAGCATTCGACCTAGGCA 59.098 50.000 9.30 0.00 0.00 4.75
2649 3242 2.024176 TTCAAGCATTCGACCTAGGC 57.976 50.000 9.30 0.36 0.00 3.93
2650 3243 4.191544 TGAATTCAAGCATTCGACCTAGG 58.808 43.478 7.41 7.41 36.13 3.02
2651 3244 5.801350 TTGAATTCAAGCATTCGACCTAG 57.199 39.130 16.91 0.00 36.13 3.02
2652 3245 6.554419 CAATTGAATTCAAGCATTCGACCTA 58.446 36.000 24.17 0.00 39.47 3.08
2653 3246 5.404946 CAATTGAATTCAAGCATTCGACCT 58.595 37.500 24.17 2.71 39.47 3.85
2654 3247 4.032104 GCAATTGAATTCAAGCATTCGACC 59.968 41.667 24.17 3.83 39.47 4.79
2655 3248 4.259135 CGCAATTGAATTCAAGCATTCGAC 60.259 41.667 24.17 8.32 39.47 4.20
2656 3249 3.853103 CGCAATTGAATTCAAGCATTCGA 59.147 39.130 24.17 0.89 39.47 3.71
2657 3250 3.000476 CCGCAATTGAATTCAAGCATTCG 60.000 43.478 24.17 19.83 39.47 3.34
2658 3251 4.175516 TCCGCAATTGAATTCAAGCATTC 58.824 39.130 24.17 11.34 39.47 2.67
2659 3252 4.191033 TCCGCAATTGAATTCAAGCATT 57.809 36.364 24.17 12.43 39.47 3.56
2660 3253 3.872511 TCCGCAATTGAATTCAAGCAT 57.127 38.095 24.17 11.60 39.47 3.79
2661 3254 3.513662 CATCCGCAATTGAATTCAAGCA 58.486 40.909 24.17 10.12 39.47 3.91
2662 3255 2.283351 GCATCCGCAATTGAATTCAAGC 59.717 45.455 24.17 20.80 37.40 4.01
2678 3298 4.977741 CAATTATGAAATTGGCGCATCC 57.022 40.909 10.83 0.00 45.49 3.51
2687 3307 7.651027 ACTGAGCTTAGCCAATTATGAAATT 57.349 32.000 5.23 0.00 35.65 1.82
2747 3370 7.630924 CAGTTTTGTTTCTTCAGAACTCGTAT 58.369 34.615 0.00 0.00 39.56 3.06
2756 3379 5.811613 TGGAAATGCAGTTTTGTTTCTTCAG 59.188 36.000 0.00 0.00 32.61 3.02
2761 3384 3.870419 TGCTGGAAATGCAGTTTTGTTTC 59.130 39.130 0.00 0.00 35.31 2.78
2767 3390 2.034124 ACAGTGCTGGAAATGCAGTTT 58.966 42.857 0.00 0.00 41.55 2.66
2787 3410 6.668283 AGATCTAACTACAGGCTGGAAAACTA 59.332 38.462 20.34 0.00 0.00 2.24
2788 3411 5.485708 AGATCTAACTACAGGCTGGAAAACT 59.514 40.000 20.34 0.00 0.00 2.66
2789 3412 5.735766 AGATCTAACTACAGGCTGGAAAAC 58.264 41.667 20.34 1.30 0.00 2.43
2790 3413 6.374417 AAGATCTAACTACAGGCTGGAAAA 57.626 37.500 20.34 0.11 0.00 2.29
2791 3414 6.374417 AAAGATCTAACTACAGGCTGGAAA 57.626 37.500 20.34 2.78 0.00 3.13
2792 3415 6.013725 TGAAAAGATCTAACTACAGGCTGGAA 60.014 38.462 20.34 5.51 0.00 3.53
2793 3416 5.483937 TGAAAAGATCTAACTACAGGCTGGA 59.516 40.000 20.34 9.92 0.00 3.86
2794 3417 5.734720 TGAAAAGATCTAACTACAGGCTGG 58.265 41.667 20.34 4.16 0.00 4.85
2795 3418 6.259608 CCATGAAAAGATCTAACTACAGGCTG 59.740 42.308 14.16 14.16 0.00 4.85
2796 3419 6.156949 TCCATGAAAAGATCTAACTACAGGCT 59.843 38.462 0.00 0.00 0.00 4.58
2797 3420 6.349300 TCCATGAAAAGATCTAACTACAGGC 58.651 40.000 0.00 0.00 0.00 4.85
2798 3421 7.010552 CGTTCCATGAAAAGATCTAACTACAGG 59.989 40.741 0.00 0.00 0.00 4.00
2799 3422 7.464710 GCGTTCCATGAAAAGATCTAACTACAG 60.465 40.741 0.00 0.00 0.00 2.74
2800 3423 6.312918 GCGTTCCATGAAAAGATCTAACTACA 59.687 38.462 0.00 0.00 0.00 2.74
2801 3424 6.312918 TGCGTTCCATGAAAAGATCTAACTAC 59.687 38.462 0.00 0.00 0.00 2.73
2802 3425 6.312918 GTGCGTTCCATGAAAAGATCTAACTA 59.687 38.462 0.00 0.00 0.00 2.24
2818 3441 2.054140 GAAACGGCTTGTGCGTTCCA 62.054 55.000 0.00 0.00 40.82 3.53
2828 3451 1.545841 GGAAATGGGAGAAACGGCTT 58.454 50.000 0.00 0.00 0.00 4.35
2829 3452 0.323451 GGGAAATGGGAGAAACGGCT 60.323 55.000 0.00 0.00 0.00 5.52
2853 3477 2.843542 GCGATGCTCGAAATCTCAAACG 60.844 50.000 9.32 0.00 43.74 3.60
2943 3569 5.681639 GGGCCTTTTTGCTAGTCTTCTATA 58.318 41.667 0.84 0.00 0.00 1.31
2947 3573 1.468914 CGGGCCTTTTTGCTAGTCTTC 59.531 52.381 0.84 0.00 0.00 2.87
2950 3578 0.521735 CACGGGCCTTTTTGCTAGTC 59.478 55.000 0.84 0.00 0.00 2.59
2951 3579 1.524008 GCACGGGCCTTTTTGCTAGT 61.524 55.000 0.00 0.00 32.00 2.57
2952 3580 1.212751 GCACGGGCCTTTTTGCTAG 59.787 57.895 0.00 0.00 32.00 3.42
2953 3581 2.622011 CGCACGGGCCTTTTTGCTA 61.622 57.895 2.82 0.00 36.38 3.49
2954 3582 3.977244 CGCACGGGCCTTTTTGCT 61.977 61.111 2.82 0.00 36.38 3.91
2955 3583 3.783478 AACGCACGGGCCTTTTTGC 62.783 57.895 2.82 5.50 36.38 3.68
2956 3584 1.948635 CAACGCACGGGCCTTTTTG 60.949 57.895 2.82 0.00 36.38 2.44
2957 3585 2.415426 CAACGCACGGGCCTTTTT 59.585 55.556 2.82 0.00 36.38 1.94
2958 3586 4.279043 GCAACGCACGGGCCTTTT 62.279 61.111 2.82 0.00 36.38 2.27
2971 3599 3.430333 TTTTTCTTCTCCCGTTGCAAC 57.570 42.857 19.89 19.89 0.00 4.17
2972 3600 3.005367 GGATTTTTCTTCTCCCGTTGCAA 59.995 43.478 0.00 0.00 0.00 4.08
2973 3601 2.556622 GGATTTTTCTTCTCCCGTTGCA 59.443 45.455 0.00 0.00 0.00 4.08
2974 3602 2.820197 AGGATTTTTCTTCTCCCGTTGC 59.180 45.455 0.00 0.00 0.00 4.17
2975 3603 4.327680 AGAGGATTTTTCTTCTCCCGTTG 58.672 43.478 0.00 0.00 0.00 4.10
2976 3604 4.041691 TGAGAGGATTTTTCTTCTCCCGTT 59.958 41.667 11.22 0.00 40.71 4.44
2977 3605 3.583086 TGAGAGGATTTTTCTTCTCCCGT 59.417 43.478 11.22 0.00 40.71 5.28
2978 3606 4.207891 TGAGAGGATTTTTCTTCTCCCG 57.792 45.455 11.22 0.00 40.71 5.14
2979 3607 7.744733 AGATATGAGAGGATTTTTCTTCTCCC 58.255 38.462 11.22 0.00 40.71 4.30
2980 3608 8.650490 AGAGATATGAGAGGATTTTTCTTCTCC 58.350 37.037 11.22 0.00 40.71 3.71
2986 3614 9.874205 CCAGATAGAGATATGAGAGGATTTTTC 57.126 37.037 0.00 0.00 0.00 2.29
2987 3615 8.824783 CCCAGATAGAGATATGAGAGGATTTTT 58.175 37.037 0.00 0.00 0.00 1.94
2988 3616 7.960861 ACCCAGATAGAGATATGAGAGGATTTT 59.039 37.037 0.00 0.00 0.00 1.82
2989 3617 7.486473 ACCCAGATAGAGATATGAGAGGATTT 58.514 38.462 0.00 0.00 0.00 2.17
2990 3618 7.055314 ACCCAGATAGAGATATGAGAGGATT 57.945 40.000 0.00 0.00 0.00 3.01
2991 3619 6.219354 TGACCCAGATAGAGATATGAGAGGAT 59.781 42.308 0.00 0.00 0.00 3.24
2992 3620 5.553557 TGACCCAGATAGAGATATGAGAGGA 59.446 44.000 0.00 0.00 0.00 3.71
2993 3621 5.825532 TGACCCAGATAGAGATATGAGAGG 58.174 45.833 0.00 0.00 0.00 3.69
2994 3622 6.484288 ACTGACCCAGATAGAGATATGAGAG 58.516 44.000 0.45 0.00 35.18 3.20
2995 3623 6.461577 ACTGACCCAGATAGAGATATGAGA 57.538 41.667 0.45 0.00 35.18 3.27
2996 3624 6.071447 CCAACTGACCCAGATAGAGATATGAG 60.071 46.154 0.45 0.00 35.18 2.90
2997 3625 5.777223 CCAACTGACCCAGATAGAGATATGA 59.223 44.000 0.45 0.00 35.18 2.15
2998 3626 5.777223 TCCAACTGACCCAGATAGAGATATG 59.223 44.000 0.45 0.00 35.18 1.78
2999 3627 5.777732 GTCCAACTGACCCAGATAGAGATAT 59.222 44.000 0.45 0.00 38.09 1.63
3000 3628 5.141182 GTCCAACTGACCCAGATAGAGATA 58.859 45.833 0.45 0.00 38.09 1.98
3001 3629 3.964031 GTCCAACTGACCCAGATAGAGAT 59.036 47.826 0.45 0.00 38.09 2.75
3002 3630 3.245622 TGTCCAACTGACCCAGATAGAGA 60.246 47.826 0.45 0.00 43.78 3.10
3003 3631 3.099905 TGTCCAACTGACCCAGATAGAG 58.900 50.000 0.45 0.00 43.78 2.43
3004 3632 3.184382 TGTCCAACTGACCCAGATAGA 57.816 47.619 0.45 0.00 43.78 1.98
3005 3633 3.981071 TTGTCCAACTGACCCAGATAG 57.019 47.619 0.45 0.00 43.78 2.08
3006 3634 3.650942 AGTTTGTCCAACTGACCCAGATA 59.349 43.478 0.45 0.00 44.70 1.98
3007 3635 2.443255 AGTTTGTCCAACTGACCCAGAT 59.557 45.455 0.45 0.00 44.70 2.90
3008 3636 1.843851 AGTTTGTCCAACTGACCCAGA 59.156 47.619 0.45 0.00 44.70 3.86
3009 3637 2.348411 AGTTTGTCCAACTGACCCAG 57.652 50.000 0.00 0.00 44.70 4.45
3010 3638 3.750371 CATAGTTTGTCCAACTGACCCA 58.250 45.455 0.00 0.00 45.98 4.51
3011 3639 2.488153 GCATAGTTTGTCCAACTGACCC 59.512 50.000 0.00 0.00 45.98 4.46
3012 3640 2.159627 CGCATAGTTTGTCCAACTGACC 59.840 50.000 0.00 0.00 45.98 4.02
3013 3641 2.806244 ACGCATAGTTTGTCCAACTGAC 59.194 45.455 0.00 0.00 45.98 3.51
3014 3642 2.805671 CACGCATAGTTTGTCCAACTGA 59.194 45.455 0.00 0.00 45.98 3.41
3015 3643 2.095768 CCACGCATAGTTTGTCCAACTG 60.096 50.000 0.00 0.00 45.98 3.16
3017 3645 1.401018 GCCACGCATAGTTTGTCCAAC 60.401 52.381 0.00 0.00 35.32 3.77
3018 3646 0.878416 GCCACGCATAGTTTGTCCAA 59.122 50.000 0.00 0.00 0.00 3.53
3019 3647 0.958382 GGCCACGCATAGTTTGTCCA 60.958 55.000 0.00 0.00 0.00 4.02
3020 3648 1.800681 GGCCACGCATAGTTTGTCC 59.199 57.895 0.00 0.00 0.00 4.02
3021 3649 1.423845 CGGCCACGCATAGTTTGTC 59.576 57.895 2.24 0.00 0.00 3.18
3022 3650 2.038269 CCGGCCACGCATAGTTTGT 61.038 57.895 2.24 0.00 39.22 2.83
3023 3651 1.582610 AACCGGCCACGCATAGTTTG 61.583 55.000 0.00 0.00 39.22 2.93
3024 3652 1.302993 AACCGGCCACGCATAGTTT 60.303 52.632 0.00 0.00 39.22 2.66
3025 3653 2.038269 CAACCGGCCACGCATAGTT 61.038 57.895 0.00 0.00 39.22 2.24
3026 3654 2.435938 CAACCGGCCACGCATAGT 60.436 61.111 0.00 0.00 39.22 2.12
3027 3655 3.202001 CCAACCGGCCACGCATAG 61.202 66.667 0.00 0.00 39.22 2.23
3037 3665 1.087771 GTCGATAACCTGCCAACCGG 61.088 60.000 0.00 0.00 0.00 5.28
3038 3666 0.390603 TGTCGATAACCTGCCAACCG 60.391 55.000 0.00 0.00 0.00 4.44
3039 3667 1.816074 TTGTCGATAACCTGCCAACC 58.184 50.000 0.00 0.00 0.00 3.77
3040 3668 4.434713 AAATTGTCGATAACCTGCCAAC 57.565 40.909 0.00 0.00 0.00 3.77
3041 3669 6.767524 ATAAAATTGTCGATAACCTGCCAA 57.232 33.333 0.00 0.00 0.00 4.52
3042 3670 6.767524 AATAAAATTGTCGATAACCTGCCA 57.232 33.333 0.00 0.00 0.00 4.92
3043 3671 7.544217 ACAAAATAAAATTGTCGATAACCTGCC 59.456 33.333 0.00 0.00 36.28 4.85
3044 3672 8.372521 CACAAAATAAAATTGTCGATAACCTGC 58.627 33.333 0.00 0.00 38.90 4.85
3045 3673 8.372521 GCACAAAATAAAATTGTCGATAACCTG 58.627 33.333 0.00 0.00 38.90 4.00
3046 3674 8.303876 AGCACAAAATAAAATTGTCGATAACCT 58.696 29.630 0.00 0.00 38.90 3.50
3047 3675 8.460831 AGCACAAAATAAAATTGTCGATAACC 57.539 30.769 0.00 0.00 38.90 2.85
3049 3677 9.284594 GCTAGCACAAAATAAAATTGTCGATAA 57.715 29.630 10.63 0.00 38.90 1.75
3050 3678 8.673711 AGCTAGCACAAAATAAAATTGTCGATA 58.326 29.630 18.83 0.00 38.90 2.92
3051 3679 7.538575 AGCTAGCACAAAATAAAATTGTCGAT 58.461 30.769 18.83 0.00 38.90 3.59
3052 3680 6.908825 AGCTAGCACAAAATAAAATTGTCGA 58.091 32.000 18.83 0.00 38.90 4.20
3053 3681 7.023575 AGAGCTAGCACAAAATAAAATTGTCG 58.976 34.615 18.83 0.00 38.90 4.35
3054 3682 7.486232 GGAGAGCTAGCACAAAATAAAATTGTC 59.514 37.037 18.83 0.00 38.90 3.18
3055 3683 7.315890 GGAGAGCTAGCACAAAATAAAATTGT 58.684 34.615 18.83 0.00 41.50 2.71
3056 3684 6.470235 CGGAGAGCTAGCACAAAATAAAATTG 59.530 38.462 18.83 0.00 0.00 2.32
3057 3685 6.404734 CCGGAGAGCTAGCACAAAATAAAATT 60.405 38.462 18.83 0.00 0.00 1.82
3058 3686 5.066505 CCGGAGAGCTAGCACAAAATAAAAT 59.933 40.000 18.83 0.00 0.00 1.82
3059 3687 4.394920 CCGGAGAGCTAGCACAAAATAAAA 59.605 41.667 18.83 0.00 0.00 1.52
3060 3688 3.938963 CCGGAGAGCTAGCACAAAATAAA 59.061 43.478 18.83 0.00 0.00 1.40
3061 3689 3.196901 TCCGGAGAGCTAGCACAAAATAA 59.803 43.478 18.83 0.00 0.00 1.40
3062 3690 2.764010 TCCGGAGAGCTAGCACAAAATA 59.236 45.455 18.83 0.00 0.00 1.40
3063 3691 1.555075 TCCGGAGAGCTAGCACAAAAT 59.445 47.619 18.83 0.00 0.00 1.82
3064 3692 0.973632 TCCGGAGAGCTAGCACAAAA 59.026 50.000 18.83 0.00 0.00 2.44
3065 3693 0.246635 GTCCGGAGAGCTAGCACAAA 59.753 55.000 18.83 0.00 0.00 2.83
3066 3694 1.605058 GGTCCGGAGAGCTAGCACAA 61.605 60.000 18.83 0.00 37.53 3.33
3067 3695 2.052690 GGTCCGGAGAGCTAGCACA 61.053 63.158 18.83 0.00 37.53 4.57
3068 3696 2.809010 GGTCCGGAGAGCTAGCAC 59.191 66.667 18.83 11.32 37.53 4.40
3074 3702 3.228017 GGCCTAGGTCCGGAGAGC 61.228 72.222 3.06 3.16 40.98 4.09
3075 3703 2.128507 GTGGCCTAGGTCCGGAGAG 61.129 68.421 11.80 2.14 0.00 3.20
3076 3704 2.043248 GTGGCCTAGGTCCGGAGA 60.043 66.667 11.80 0.00 0.00 3.71
3077 3705 2.363795 TGTGGCCTAGGTCCGGAG 60.364 66.667 11.80 0.00 0.00 4.63
3078 3706 2.363795 CTGTGGCCTAGGTCCGGA 60.364 66.667 11.80 0.00 0.00 5.14
3079 3707 2.683933 ACTGTGGCCTAGGTCCGG 60.684 66.667 11.80 9.90 0.00 5.14
3080 3708 2.579201 CACTGTGGCCTAGGTCCG 59.421 66.667 11.80 1.66 0.00 4.79
3081 3709 2.269241 GCACTGTGGCCTAGGTCC 59.731 66.667 11.80 12.88 0.00 4.46
3082 3710 2.125512 CGCACTGTGGCCTAGGTC 60.126 66.667 6.37 6.37 0.00 3.85
3083 3711 4.394712 GCGCACTGTGGCCTAGGT 62.395 66.667 11.31 0.00 0.00 3.08
3084 3712 4.087892 AGCGCACTGTGGCCTAGG 62.088 66.667 11.47 3.67 0.00 3.02
3085 3713 2.816958 CAGCGCACTGTGGCCTAG 60.817 66.667 11.47 5.03 39.22 3.02
3100 3728 3.259633 AAGGAAGCCCACCTCGCAG 62.260 63.158 0.00 0.00 36.67 5.18
3101 3729 3.249189 AAGGAAGCCCACCTCGCA 61.249 61.111 0.00 0.00 36.67 5.10
3102 3730 2.436824 GAAGGAAGCCCACCTCGC 60.437 66.667 0.00 0.00 36.67 5.03
3103 3731 1.078848 CTGAAGGAAGCCCACCTCG 60.079 63.158 0.00 0.00 36.67 4.63
3104 3732 0.322008 CACTGAAGGAAGCCCACCTC 60.322 60.000 0.00 0.00 36.67 3.85
3105 3733 1.763770 CACTGAAGGAAGCCCACCT 59.236 57.895 0.00 0.00 39.69 4.00
3106 3734 1.303643 CCACTGAAGGAAGCCCACC 60.304 63.158 0.00 0.00 33.88 4.61
3107 3735 1.303643 CCCACTGAAGGAAGCCCAC 60.304 63.158 0.00 0.00 33.88 4.61
3108 3736 3.170362 CCCACTGAAGGAAGCCCA 58.830 61.111 0.00 0.00 33.88 5.36
3109 3737 2.361737 GCCCACTGAAGGAAGCCC 60.362 66.667 0.00 0.00 0.00 5.19
3110 3738 2.361737 GGCCCACTGAAGGAAGCC 60.362 66.667 0.00 0.00 0.00 4.35
3111 3739 0.827507 TTTGGCCCACTGAAGGAAGC 60.828 55.000 0.00 0.00 0.00 3.86
3112 3740 1.341209 GTTTTGGCCCACTGAAGGAAG 59.659 52.381 0.00 0.00 0.00 3.46
3113 3741 1.408969 GTTTTGGCCCACTGAAGGAA 58.591 50.000 0.00 0.00 0.00 3.36
3114 3742 0.821711 CGTTTTGGCCCACTGAAGGA 60.822 55.000 0.00 0.00 0.00 3.36
3115 3743 1.659794 CGTTTTGGCCCACTGAAGG 59.340 57.895 0.00 0.00 0.00 3.46
3116 3744 1.659794 CCGTTTTGGCCCACTGAAG 59.340 57.895 0.00 0.00 0.00 3.02
3117 3745 1.830408 CCCGTTTTGGCCCACTGAA 60.830 57.895 0.00 0.00 35.87 3.02
3118 3746 2.203422 CCCGTTTTGGCCCACTGA 60.203 61.111 0.00 0.00 35.87 3.41
3119 3747 2.520741 ACCCGTTTTGGCCCACTG 60.521 61.111 0.00 0.00 35.87 3.66
3120 3748 2.520741 CACCCGTTTTGGCCCACT 60.521 61.111 0.00 0.00 35.87 4.00
3121 3749 3.611674 CCACCCGTTTTGGCCCAC 61.612 66.667 0.00 0.00 35.87 4.61
3126 3754 1.033574 TTACTTGCCACCCGTTTTGG 58.966 50.000 0.00 0.00 37.17 3.28
3127 3755 1.405821 TGTTACTTGCCACCCGTTTTG 59.594 47.619 0.00 0.00 0.00 2.44
3128 3756 1.765230 TGTTACTTGCCACCCGTTTT 58.235 45.000 0.00 0.00 0.00 2.43
3129 3757 1.765230 TTGTTACTTGCCACCCGTTT 58.235 45.000 0.00 0.00 0.00 3.60
3130 3758 1.765230 TTTGTTACTTGCCACCCGTT 58.235 45.000 0.00 0.00 0.00 4.44
3131 3759 1.406180 GTTTTGTTACTTGCCACCCGT 59.594 47.619 0.00 0.00 0.00 5.28
3132 3760 1.269361 GGTTTTGTTACTTGCCACCCG 60.269 52.381 0.00 0.00 0.00 5.28
3133 3761 1.757699 TGGTTTTGTTACTTGCCACCC 59.242 47.619 0.00 0.00 0.00 4.61
3134 3762 2.691011 TCTGGTTTTGTTACTTGCCACC 59.309 45.455 0.00 0.00 0.00 4.61
3135 3763 4.584327 ATCTGGTTTTGTTACTTGCCAC 57.416 40.909 0.00 0.00 0.00 5.01
3136 3764 4.217550 GCTATCTGGTTTTGTTACTTGCCA 59.782 41.667 0.00 0.00 0.00 4.92
3137 3765 4.671766 CGCTATCTGGTTTTGTTACTTGCC 60.672 45.833 0.00 0.00 0.00 4.52
3138 3766 4.083484 ACGCTATCTGGTTTTGTTACTTGC 60.083 41.667 0.00 0.00 0.00 4.01
3139 3767 5.607119 ACGCTATCTGGTTTTGTTACTTG 57.393 39.130 0.00 0.00 0.00 3.16
3140 3768 5.346822 CGTACGCTATCTGGTTTTGTTACTT 59.653 40.000 0.52 0.00 0.00 2.24
3141 3769 4.860907 CGTACGCTATCTGGTTTTGTTACT 59.139 41.667 0.52 0.00 0.00 2.24
3142 3770 4.622740 ACGTACGCTATCTGGTTTTGTTAC 59.377 41.667 16.72 0.00 0.00 2.50
3143 3771 4.808558 ACGTACGCTATCTGGTTTTGTTA 58.191 39.130 16.72 0.00 0.00 2.41
3144 3772 3.656559 ACGTACGCTATCTGGTTTTGTT 58.343 40.909 16.72 0.00 0.00 2.83
3145 3773 3.308438 ACGTACGCTATCTGGTTTTGT 57.692 42.857 16.72 0.00 0.00 2.83
3146 3774 5.766702 TTAACGTACGCTATCTGGTTTTG 57.233 39.130 16.72 0.00 0.00 2.44
3147 3775 6.973229 ATTTAACGTACGCTATCTGGTTTT 57.027 33.333 16.72 0.16 0.00 2.43
3148 3776 6.973229 AATTTAACGTACGCTATCTGGTTT 57.027 33.333 16.72 0.95 0.00 3.27
3149 3777 8.652810 ATTAATTTAACGTACGCTATCTGGTT 57.347 30.769 16.72 1.73 0.00 3.67
3150 3778 8.545420 CAATTAATTTAACGTACGCTATCTGGT 58.455 33.333 16.72 0.00 0.00 4.00
3151 3779 8.757789 TCAATTAATTTAACGTACGCTATCTGG 58.242 33.333 16.72 0.00 0.00 3.86
3155 3783 9.412390 CGTTTCAATTAATTTAACGTACGCTAT 57.588 29.630 23.98 4.52 37.42 2.97
3156 3784 7.897291 CCGTTTCAATTAATTTAACGTACGCTA 59.103 33.333 26.96 4.37 39.74 4.26
3157 3785 6.737750 CCGTTTCAATTAATTTAACGTACGCT 59.262 34.615 26.96 5.63 39.74 5.07
3158 3786 6.022329 CCCGTTTCAATTAATTTAACGTACGC 60.022 38.462 26.96 0.00 39.74 4.42
3159 3787 7.214263 GTCCCGTTTCAATTAATTTAACGTACG 59.786 37.037 26.96 15.01 39.74 3.67
3160 3788 7.481483 GGTCCCGTTTCAATTAATTTAACGTAC 59.519 37.037 26.96 24.23 39.74 3.67
3161 3789 7.173907 TGGTCCCGTTTCAATTAATTTAACGTA 59.826 33.333 26.96 18.82 39.74 3.57
3162 3790 6.016443 TGGTCCCGTTTCAATTAATTTAACGT 60.016 34.615 26.96 0.00 39.74 3.99
3163 3791 6.380190 TGGTCCCGTTTCAATTAATTTAACG 58.620 36.000 24.70 24.70 40.71 3.18
3164 3792 7.868922 ACTTGGTCCCGTTTCAATTAATTTAAC 59.131 33.333 0.00 5.57 0.00 2.01
3165 3793 7.868415 CACTTGGTCCCGTTTCAATTAATTTAA 59.132 33.333 0.00 0.00 0.00 1.52
3166 3794 7.230913 TCACTTGGTCCCGTTTCAATTAATTTA 59.769 33.333 0.00 0.00 0.00 1.40
3167 3795 6.041069 TCACTTGGTCCCGTTTCAATTAATTT 59.959 34.615 0.00 0.00 0.00 1.82
3168 3796 5.536916 TCACTTGGTCCCGTTTCAATTAATT 59.463 36.000 0.00 0.00 0.00 1.40
3169 3797 5.074115 TCACTTGGTCCCGTTTCAATTAAT 58.926 37.500 0.00 0.00 0.00 1.40
3170 3798 4.462133 TCACTTGGTCCCGTTTCAATTAA 58.538 39.130 0.00 0.00 0.00 1.40
3171 3799 4.088056 TCACTTGGTCCCGTTTCAATTA 57.912 40.909 0.00 0.00 0.00 1.40
3172 3800 2.938838 TCACTTGGTCCCGTTTCAATT 58.061 42.857 0.00 0.00 0.00 2.32
3173 3801 2.649531 TCACTTGGTCCCGTTTCAAT 57.350 45.000 0.00 0.00 0.00 2.57
3174 3802 2.294074 CTTCACTTGGTCCCGTTTCAA 58.706 47.619 0.00 0.00 0.00 2.69
3175 3803 1.961793 CTTCACTTGGTCCCGTTTCA 58.038 50.000 0.00 0.00 0.00 2.69
3176 3804 0.591659 GCTTCACTTGGTCCCGTTTC 59.408 55.000 0.00 0.00 0.00 2.78
3177 3805 1.164041 CGCTTCACTTGGTCCCGTTT 61.164 55.000 0.00 0.00 0.00 3.60
3178 3806 1.597027 CGCTTCACTTGGTCCCGTT 60.597 57.895 0.00 0.00 0.00 4.44
3179 3807 2.030562 CGCTTCACTTGGTCCCGT 59.969 61.111 0.00 0.00 0.00 5.28
3180 3808 2.742372 CCGCTTCACTTGGTCCCG 60.742 66.667 0.00 0.00 0.00 5.14
3181 3809 2.359975 CCCGCTTCACTTGGTCCC 60.360 66.667 0.00 0.00 0.00 4.46
3182 3810 1.671379 GTCCCGCTTCACTTGGTCC 60.671 63.158 0.00 0.00 0.00 4.46
3183 3811 2.027625 CGTCCCGCTTCACTTGGTC 61.028 63.158 0.00 0.00 0.00 4.02
3184 3812 2.030562 CGTCCCGCTTCACTTGGT 59.969 61.111 0.00 0.00 0.00 3.67
3185 3813 0.882927 TTTCGTCCCGCTTCACTTGG 60.883 55.000 0.00 0.00 0.00 3.61
3186 3814 0.234884 GTTTCGTCCCGCTTCACTTG 59.765 55.000 0.00 0.00 0.00 3.16
3187 3815 0.883370 GGTTTCGTCCCGCTTCACTT 60.883 55.000 0.00 0.00 0.00 3.16
3188 3816 1.301479 GGTTTCGTCCCGCTTCACT 60.301 57.895 0.00 0.00 0.00 3.41
3189 3817 1.161563 TTGGTTTCGTCCCGCTTCAC 61.162 55.000 0.00 0.00 0.00 3.18
3190 3818 0.882927 CTTGGTTTCGTCCCGCTTCA 60.883 55.000 0.00 0.00 0.00 3.02
3191 3819 0.601841 TCTTGGTTTCGTCCCGCTTC 60.602 55.000 0.00 0.00 0.00 3.86
3192 3820 0.179040 TTCTTGGTTTCGTCCCGCTT 60.179 50.000 0.00 0.00 0.00 4.68
3193 3821 0.036306 ATTCTTGGTTTCGTCCCGCT 59.964 50.000 0.00 0.00 0.00 5.52
3194 3822 1.729284 TATTCTTGGTTTCGTCCCGC 58.271 50.000 0.00 0.00 0.00 6.13
3195 3823 3.527533 TGATATTCTTGGTTTCGTCCCG 58.472 45.455 0.00 0.00 0.00 5.14
3196 3824 5.368989 AGATGATATTCTTGGTTTCGTCCC 58.631 41.667 0.00 0.00 0.00 4.46
3197 3825 5.467063 GGAGATGATATTCTTGGTTTCGTCC 59.533 44.000 0.00 0.00 0.00 4.79
3198 3826 5.467063 GGGAGATGATATTCTTGGTTTCGTC 59.533 44.000 0.00 0.00 0.00 4.20
3199 3827 5.131142 AGGGAGATGATATTCTTGGTTTCGT 59.869 40.000 0.00 0.00 0.00 3.85
3200 3828 5.615289 AGGGAGATGATATTCTTGGTTTCG 58.385 41.667 0.00 0.00 0.00 3.46
3201 3829 7.888250 AAAGGGAGATGATATTCTTGGTTTC 57.112 36.000 0.00 0.00 0.00 2.78
3202 3830 9.942526 ATTAAAGGGAGATGATATTCTTGGTTT 57.057 29.630 0.00 0.00 0.00 3.27
3229 3857 8.751242 GGTTTCTCACTCTTTTCTATACCTACT 58.249 37.037 0.00 0.00 0.00 2.57
3230 3858 7.980662 GGGTTTCTCACTCTTTTCTATACCTAC 59.019 40.741 0.00 0.00 0.00 3.18
3231 3859 7.676893 TGGGTTTCTCACTCTTTTCTATACCTA 59.323 37.037 0.00 0.00 0.00 3.08
3232 3860 6.500751 TGGGTTTCTCACTCTTTTCTATACCT 59.499 38.462 0.00 0.00 0.00 3.08
3233 3861 6.708285 TGGGTTTCTCACTCTTTTCTATACC 58.292 40.000 0.00 0.00 0.00 2.73
3234 3862 7.496263 GGATGGGTTTCTCACTCTTTTCTATAC 59.504 40.741 0.00 0.00 0.00 1.47
3235 3863 7.182026 TGGATGGGTTTCTCACTCTTTTCTATA 59.818 37.037 0.00 0.00 0.00 1.31
3236 3864 6.012508 TGGATGGGTTTCTCACTCTTTTCTAT 60.013 38.462 0.00 0.00 0.00 1.98
3237 3865 5.309543 TGGATGGGTTTCTCACTCTTTTCTA 59.690 40.000 0.00 0.00 0.00 2.10
3238 3866 4.104738 TGGATGGGTTTCTCACTCTTTTCT 59.895 41.667 0.00 0.00 0.00 2.52
3239 3867 4.216472 GTGGATGGGTTTCTCACTCTTTTC 59.784 45.833 0.00 0.00 0.00 2.29
3240 3868 4.145052 GTGGATGGGTTTCTCACTCTTTT 58.855 43.478 0.00 0.00 0.00 2.27
3245 3873 2.376518 ACATGTGGATGGGTTTCTCACT 59.623 45.455 0.00 0.00 33.39 3.41
3293 3921 1.457303 CTTGAGTGAGTAGTTGCGTGC 59.543 52.381 0.00 0.00 0.00 5.34
3346 3976 4.119862 CGTGGATATTTCAGTCGGACATT 58.880 43.478 11.27 0.00 0.00 2.71
3401 4031 1.724582 AACTGTGGCCGTTCTGCAAC 61.725 55.000 0.00 0.00 35.65 4.17
3405 4036 0.588252 CTTCAACTGTGGCCGTTCTG 59.412 55.000 0.00 0.00 0.00 3.02
3429 4060 2.050144 ACTATTGTGATCGATGGGGCT 58.950 47.619 0.54 0.00 0.00 5.19
3440 4071 4.393680 GGAAACACCGCAATACTATTGTGA 59.606 41.667 19.69 0.00 32.02 3.58
3472 4103 5.470098 ACACAATTATCTTGCTCGTCTGTTT 59.530 36.000 0.00 0.00 0.00 2.83
3512 4143 3.591835 CGCAACCACGGGCAACTT 61.592 61.111 0.00 0.00 0.00 2.66
3513 4144 4.868116 ACGCAACCACGGGCAACT 62.868 61.111 0.00 0.00 37.37 3.16
3520 4151 3.334751 TGCTTCGACGCAACCACG 61.335 61.111 14.90 0.00 36.89 4.94
3529 4160 2.197577 GCTATCTTGGAGTGCTTCGAC 58.802 52.381 0.00 0.00 0.00 4.20


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.