Multiple sequence alignment - TraesCS4A01G356100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G356100 chr4A 100.000 5490 0 0 1 5490 629856252 629861741 0.000000e+00 10139.0
1 TraesCS4A01G356100 chr5B 93.719 2595 83 32 2121 4668 680361167 680358606 0.000000e+00 3816.0
2 TraesCS4A01G356100 chr5B 81.779 933 90 38 1007 1900 680362407 680361516 0.000000e+00 708.0
3 TraesCS4A01G356100 chr5B 79.179 658 106 10 4 655 680363545 680362913 1.410000e-115 427.0
4 TraesCS4A01G356100 chr5B 89.744 195 13 5 1939 2129 680361507 680361316 5.490000e-60 243.0
5 TraesCS4A01G356100 chr5B 83.193 238 36 4 407 642 708880590 708880825 1.200000e-51 215.0
6 TraesCS4A01G356100 chr5D 93.503 2078 62 31 2012 4080 538790387 538788374 0.000000e+00 3022.0
7 TraesCS4A01G356100 chr5D 81.260 1905 169 79 34 1869 538792434 538790649 0.000000e+00 1367.0
8 TraesCS4A01G356100 chr5D 88.718 780 45 20 4064 4807 538788363 538787591 0.000000e+00 913.0
9 TraesCS4A01G356100 chr5D 85.806 620 87 1 3264 3882 388878 388259 0.000000e+00 656.0
10 TraesCS4A01G356100 chr5D 87.744 563 35 8 4912 5443 6247129 6247688 1.300000e-175 627.0
11 TraesCS4A01G356100 chr5D 88.182 550 34 6 4922 5443 503345567 503345021 1.300000e-175 627.0
12 TraesCS4A01G356100 chr5D 81.172 239 28 10 1865 2093 538790576 538790345 5.650000e-40 176.0
13 TraesCS4A01G356100 chr5D 97.895 95 2 0 1999 2093 538790478 538790384 1.220000e-36 165.0
14 TraesCS4A01G356100 chr5D 97.297 37 1 0 2286 2322 538790652 538790616 4.590000e-06 63.9
15 TraesCS4A01G356100 chr5A 79.870 1078 204 12 2810 3882 228191 229260 0.000000e+00 776.0
16 TraesCS4A01G356100 chr5A 85.554 623 89 1 3261 3882 229715 230337 0.000000e+00 651.0
17 TraesCS4A01G356100 chrUn 85.645 620 88 1 3264 3882 454677304 454676685 0.000000e+00 651.0
18 TraesCS4A01G356100 chrUn 87.782 532 34 5 4922 5424 424637799 424638328 1.320000e-165 593.0
19 TraesCS4A01G356100 chrUn 91.395 337 21 3 4922 5252 422744595 422744261 6.480000e-124 455.0
20 TraesCS4A01G356100 chr1D 88.203 551 31 8 4922 5443 51825826 51826371 1.300000e-175 627.0
21 TraesCS4A01G356100 chr1D 88.022 551 35 5 4922 5443 254465541 254464993 1.680000e-174 623.0
22 TraesCS4A01G356100 chr1D 83.710 620 99 2 3267 3885 252528696 252528078 7.920000e-163 584.0
23 TraesCS4A01G356100 chr1D 86.496 548 40 7 4922 5440 180380101 180380643 6.170000e-159 571.0
24 TraesCS4A01G356100 chr1D 86.207 551 44 7 4922 5443 244757261 244756714 7.980000e-158 568.0
25 TraesCS4A01G356100 chr1D 85.250 400 59 0 2777 3176 8712948 8713347 3.960000e-111 412.0
26 TraesCS4A01G356100 chr1B 88.022 551 35 5 4922 5443 633723132 633722584 1.680000e-174 623.0
27 TraesCS4A01G356100 chr1B 84.032 620 97 2 3267 3885 360808768 360809386 3.660000e-166 595.0
28 TraesCS4A01G356100 chr1B 84.750 400 61 0 2777 3176 11858381 11858780 8.570000e-108 401.0
29 TraesCS4A01G356100 chr1B 93.793 145 9 0 5299 5443 665456646 665456502 9.260000e-53 219.0
30 TraesCS4A01G356100 chr1A 87.681 552 36 6 4922 5443 554488162 554487613 1.010000e-171 614.0
31 TraesCS4A01G356100 chr1A 84.250 400 63 0 2777 3176 10067342 10067741 1.850000e-104 390.0
32 TraesCS4A01G356100 chr3A 87.659 551 37 5 4922 5443 105550822 105551370 3.640000e-171 612.0
33 TraesCS4A01G356100 chr3A 83.193 238 35 5 408 642 712545004 712544769 4.310000e-51 213.0
34 TraesCS4A01G356100 chr2B 87.659 551 37 7 4922 5443 683734533 683733985 3.640000e-171 612.0
35 TraesCS4A01G356100 chr2B 91.414 198 11 1 5252 5443 43071004 43070807 3.260000e-67 267.0
36 TraesCS4A01G356100 chr3D 87.273 550 38 6 4922 5442 170687915 170688461 2.830000e-167 599.0
37 TraesCS4A01G356100 chr3D 81.226 261 47 2 403 662 536888390 536888131 5.570000e-50 209.0
38 TraesCS4A01G356100 chr3B 85.900 539 76 0 3347 3885 647078830 647079368 4.770000e-160 575.0
39 TraesCS4A01G356100 chr3B 80.071 281 47 8 408 682 32447520 32447797 3.350000e-47 200.0
40 TraesCS4A01G356100 chr3B 79.505 283 51 6 408 685 623667582 623667302 1.560000e-45 195.0
41 TraesCS4A01G356100 chr6B 83.122 237 36 4 408 642 634640627 634640393 4.310000e-51 213.0
42 TraesCS4A01G356100 chr6B 100.000 28 0 0 14 41 299821364 299821391 1.000000e-02 52.8
43 TraesCS4A01G356100 chr7D 80.714 280 47 6 408 682 536118822 536119099 1.550000e-50 211.0
44 TraesCS4A01G356100 chr2D 80.142 282 45 8 408 682 344349534 344349811 3.350000e-47 200.0
45 TraesCS4A01G356100 chr7A 79.310 290 48 10 408 689 98755672 98755957 5.610000e-45 193.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G356100 chr4A 629856252 629861741 5489 False 10139.00 10139 100.000000 1 5490 1 chr4A.!!$F1 5489
1 TraesCS4A01G356100 chr5B 680358606 680363545 4939 True 1298.50 3816 86.105250 4 4668 4 chr5B.!!$R1 4664
2 TraesCS4A01G356100 chr5D 538787591 538792434 4843 True 951.15 3022 89.974167 34 4807 6 chr5D.!!$R3 4773
3 TraesCS4A01G356100 chr5D 388259 388878 619 True 656.00 656 85.806000 3264 3882 1 chr5D.!!$R1 618
4 TraesCS4A01G356100 chr5D 6247129 6247688 559 False 627.00 627 87.744000 4912 5443 1 chr5D.!!$F1 531
5 TraesCS4A01G356100 chr5D 503345021 503345567 546 True 627.00 627 88.182000 4922 5443 1 chr5D.!!$R2 521
6 TraesCS4A01G356100 chr5A 228191 230337 2146 False 713.50 776 82.712000 2810 3882 2 chr5A.!!$F1 1072
7 TraesCS4A01G356100 chrUn 454676685 454677304 619 True 651.00 651 85.645000 3264 3882 1 chrUn.!!$R2 618
8 TraesCS4A01G356100 chrUn 424637799 424638328 529 False 593.00 593 87.782000 4922 5424 1 chrUn.!!$F1 502
9 TraesCS4A01G356100 chr1D 51825826 51826371 545 False 627.00 627 88.203000 4922 5443 1 chr1D.!!$F2 521
10 TraesCS4A01G356100 chr1D 254464993 254465541 548 True 623.00 623 88.022000 4922 5443 1 chr1D.!!$R3 521
11 TraesCS4A01G356100 chr1D 252528078 252528696 618 True 584.00 584 83.710000 3267 3885 1 chr1D.!!$R2 618
12 TraesCS4A01G356100 chr1D 180380101 180380643 542 False 571.00 571 86.496000 4922 5440 1 chr1D.!!$F3 518
13 TraesCS4A01G356100 chr1D 244756714 244757261 547 True 568.00 568 86.207000 4922 5443 1 chr1D.!!$R1 521
14 TraesCS4A01G356100 chr1B 633722584 633723132 548 True 623.00 623 88.022000 4922 5443 1 chr1B.!!$R1 521
15 TraesCS4A01G356100 chr1B 360808768 360809386 618 False 595.00 595 84.032000 3267 3885 1 chr1B.!!$F2 618
16 TraesCS4A01G356100 chr1A 554487613 554488162 549 True 614.00 614 87.681000 4922 5443 1 chr1A.!!$R1 521
17 TraesCS4A01G356100 chr3A 105550822 105551370 548 False 612.00 612 87.659000 4922 5443 1 chr3A.!!$F1 521
18 TraesCS4A01G356100 chr2B 683733985 683734533 548 True 612.00 612 87.659000 4922 5443 1 chr2B.!!$R2 521
19 TraesCS4A01G356100 chr3D 170687915 170688461 546 False 599.00 599 87.273000 4922 5442 1 chr3D.!!$F1 520
20 TraesCS4A01G356100 chr3B 647078830 647079368 538 False 575.00 575 85.900000 3347 3885 1 chr3B.!!$F2 538

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
957 1002 0.036577 ACAGCACAGCACAGATCCTC 60.037 55.0 0.00 0.0 0.00 3.71 F
1495 1708 0.036294 GGGAGGCGACTTGCTACTTT 60.036 55.0 0.00 0.0 44.43 2.66 F
1917 2221 0.178068 ATTGAATAGCTCGGCACCGT 59.822 50.0 9.23 0.0 40.74 4.83 F
3314 3866 0.541392 TGAGCCATACTGTGCCGATT 59.459 50.0 0.00 0.0 0.00 3.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1915 2219 1.006571 AACCACGCACTGAGGTACG 60.007 57.895 0.00 0.00 41.09 3.67 R
2458 3005 3.932710 GACGTGCTCATCAACCTTATTCA 59.067 43.478 0.00 0.00 0.00 2.57 R
3830 4382 0.324368 AGCCACCGATCCAGACACTA 60.324 55.000 0.00 0.00 0.00 2.74 R
4758 5411 0.109319 AATCATTGGCGGCGACAAAC 60.109 50.000 33.78 1.83 32.77 2.93 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 2.437625 ACTAGCACCCGTTGACTGT 58.562 52.632 0.00 0.00 0.00 3.55
60 61 0.471211 AGTCCCCGTTGAGGTCAAGA 60.471 55.000 0.00 0.00 38.74 3.02
68 69 2.135933 GTTGAGGTCAAGACTGAACGG 58.864 52.381 0.00 0.00 44.65 4.44
85 86 3.368822 GCACTTGATGGCTGGCAA 58.631 55.556 8.35 0.00 0.00 4.52
89 90 1.754803 CACTTGATGGCTGGCAATGAT 59.245 47.619 8.35 0.00 0.00 2.45
95 96 2.428925 GGCTGGCAATGATGGTGGG 61.429 63.158 0.00 0.00 0.00 4.61
117 118 1.228245 GGACTCCTGCTGCAAACCA 60.228 57.895 3.02 0.00 0.00 3.67
155 156 7.332926 GGCGTAGTAGTATAGCAGATACAACTA 59.667 40.741 10.42 0.00 0.00 2.24
161 162 7.981102 AGTATAGCAGATACAACTACATCGA 57.019 36.000 10.42 0.00 0.00 3.59
171 172 4.552355 ACAACTACATCGACGATTGAACA 58.448 39.130 7.83 0.00 0.00 3.18
176 177 3.054166 ACATCGACGATTGAACAAACGA 58.946 40.909 20.15 14.41 38.60 3.85
201 202 4.341502 CGGGGCACACGCTTTTGG 62.342 66.667 0.00 0.00 38.60 3.28
202 203 4.662961 GGGGCACACGCTTTTGGC 62.663 66.667 0.00 0.00 38.60 4.52
257 258 7.363431 CAAAGTGTCCTTCCTATTTTCTGTTC 58.637 38.462 0.00 0.00 0.00 3.18
259 260 4.995487 GTGTCCTTCCTATTTTCTGTTCGT 59.005 41.667 0.00 0.00 0.00 3.85
266 267 1.317613 ATTTTCTGTTCGTGGCAGCA 58.682 45.000 0.00 0.00 34.21 4.41
286 287 1.358402 GTGTTGCGTGCCATCAACA 59.642 52.632 10.22 10.22 46.97 3.33
301 302 1.841556 AACAGGTCCTTCGGCTCCA 60.842 57.895 0.00 0.00 0.00 3.86
308 309 4.880537 CTTCGGCTCCAGCGCGAT 62.881 66.667 12.10 0.00 41.02 4.58
325 332 2.429927 ATGGCGACCATCTCGATCA 58.570 52.632 5.65 0.00 46.14 2.92
337 344 4.193334 CGATCAGCCCTGTCGCGA 62.193 66.667 3.71 3.71 31.50 5.87
353 360 1.736645 CGACACTGGACGGCGAAAT 60.737 57.895 16.62 0.00 0.00 2.17
378 385 4.339814 GTGTTGGATGACAAAAAGTACCCA 59.660 41.667 0.00 0.00 41.58 4.51
391 398 2.886134 TACCCAGGTCCGCGCTTTT 61.886 57.895 5.56 0.00 0.00 2.27
437 445 1.904287 TGGTACAATCAAAAGCCGCT 58.096 45.000 0.00 0.00 31.92 5.52
438 446 1.810151 TGGTACAATCAAAAGCCGCTC 59.190 47.619 0.00 0.00 31.92 5.03
439 447 1.810151 GGTACAATCAAAAGCCGCTCA 59.190 47.619 0.00 0.00 0.00 4.26
440 448 2.414161 GGTACAATCAAAAGCCGCTCAC 60.414 50.000 0.00 0.00 0.00 3.51
441 449 1.317613 ACAATCAAAAGCCGCTCACA 58.682 45.000 0.00 0.00 0.00 3.58
442 450 1.888512 ACAATCAAAAGCCGCTCACAT 59.111 42.857 0.00 0.00 0.00 3.21
443 451 2.256174 CAATCAAAAGCCGCTCACATG 58.744 47.619 0.00 0.00 0.00 3.21
444 452 1.538047 ATCAAAAGCCGCTCACATGT 58.462 45.000 0.00 0.00 0.00 3.21
445 453 2.177394 TCAAAAGCCGCTCACATGTA 57.823 45.000 0.00 0.00 0.00 2.29
446 454 1.804151 TCAAAAGCCGCTCACATGTAC 59.196 47.619 0.00 0.00 0.00 2.90
447 455 1.535028 CAAAAGCCGCTCACATGTACA 59.465 47.619 0.00 0.00 0.00 2.90
448 456 1.890876 AAAGCCGCTCACATGTACAA 58.109 45.000 0.00 0.00 0.00 2.41
455 463 2.034591 CGCTCACATGTACAAGCATACG 60.035 50.000 20.53 6.25 34.39 3.06
470 478 3.866651 GCATACGCTCATCCCTATGAAT 58.133 45.455 0.00 0.00 41.57 2.57
473 481 1.073964 CGCTCATCCCTATGAATGCG 58.926 55.000 7.35 7.35 44.83 4.73
544 552 6.347240 GGCATAGCATCTTGAGATTTTACGAG 60.347 42.308 0.00 0.00 31.21 4.18
554 562 4.020573 TGAGATTTTACGAGGTCACCACAT 60.021 41.667 0.00 0.00 0.00 3.21
557 565 0.389296 TTACGAGGTCACCACATGCG 60.389 55.000 0.00 0.00 0.00 4.73
575 583 3.691342 CCTCGCAGTCGGTGGGAA 61.691 66.667 6.84 0.00 46.76 3.97
589 597 2.979649 GGAACGTCTCCTCCCACC 59.020 66.667 8.87 0.00 41.61 4.61
599 607 1.666872 CCTCCCACCGAACGAACAC 60.667 63.158 0.00 0.00 0.00 3.32
601 609 2.109387 CCCACCGAACGAACACCA 59.891 61.111 0.00 0.00 0.00 4.17
605 613 2.027897 CCGAACGAACACCACCGA 59.972 61.111 0.00 0.00 0.00 4.69
608 616 0.651551 CGAACGAACACCACCGAAAA 59.348 50.000 0.00 0.00 0.00 2.29
624 632 7.033185 CCACCGAAAACCTAAAATAAATCCAG 58.967 38.462 0.00 0.00 0.00 3.86
635 643 9.991906 CCTAAAATAAATCCAGGAATACTACGA 57.008 33.333 0.00 0.00 0.00 3.43
646 654 3.802685 GGAATACTACGAGCACCAATGTC 59.197 47.826 0.00 0.00 0.00 3.06
655 663 3.367395 CGAGCACCAATGTCAAGTCTAGA 60.367 47.826 0.00 0.00 0.00 2.43
656 664 4.569943 GAGCACCAATGTCAAGTCTAGAA 58.430 43.478 0.00 0.00 0.00 2.10
658 666 5.564550 AGCACCAATGTCAAGTCTAGAATT 58.435 37.500 0.00 0.00 0.00 2.17
672 702 8.696374 CAAGTCTAGAATTTGAGGATACCACTA 58.304 37.037 1.94 0.00 37.17 2.74
686 721 5.422650 GGATACCACTATCCTCCTAATCACC 59.577 48.000 0.21 0.00 43.87 4.02
706 741 4.637483 CCATAGATTGGTTCGCACATTT 57.363 40.909 0.00 0.00 40.99 2.32
709 746 5.277974 CCATAGATTGGTTCGCACATTTAGG 60.278 44.000 0.00 0.00 40.99 2.69
712 749 1.448985 TGGTTCGCACATTTAGGAGC 58.551 50.000 0.00 0.00 0.00 4.70
722 759 4.379394 GCACATTTAGGAGCGTTTTGATGA 60.379 41.667 0.00 0.00 0.00 2.92
723 760 5.327091 CACATTTAGGAGCGTTTTGATGAG 58.673 41.667 0.00 0.00 0.00 2.90
724 761 5.003804 ACATTTAGGAGCGTTTTGATGAGT 58.996 37.500 0.00 0.00 0.00 3.41
725 762 5.473504 ACATTTAGGAGCGTTTTGATGAGTT 59.526 36.000 0.00 0.00 0.00 3.01
726 763 5.356882 TTTAGGAGCGTTTTGATGAGTTG 57.643 39.130 0.00 0.00 0.00 3.16
727 764 1.537202 AGGAGCGTTTTGATGAGTTGC 59.463 47.619 0.00 0.00 0.00 4.17
728 765 1.401539 GGAGCGTTTTGATGAGTTGCC 60.402 52.381 0.00 0.00 0.00 4.52
729 766 0.598065 AGCGTTTTGATGAGTTGCCC 59.402 50.000 0.00 0.00 0.00 5.36
730 767 0.313672 GCGTTTTGATGAGTTGCCCA 59.686 50.000 0.00 0.00 0.00 5.36
731 768 1.930371 GCGTTTTGATGAGTTGCCCAC 60.930 52.381 0.00 0.00 0.00 4.61
732 769 1.336440 CGTTTTGATGAGTTGCCCACA 59.664 47.619 0.00 0.00 0.00 4.17
733 770 2.030007 CGTTTTGATGAGTTGCCCACAT 60.030 45.455 0.00 0.00 0.00 3.21
734 771 3.190327 CGTTTTGATGAGTTGCCCACATA 59.810 43.478 0.00 0.00 0.00 2.29
735 772 4.672542 CGTTTTGATGAGTTGCCCACATAG 60.673 45.833 0.00 0.00 0.00 2.23
744 781 2.680339 GTTGCCCACATAGAGAGAAAGC 59.320 50.000 0.00 0.00 0.00 3.51
752 789 5.879223 CCACATAGAGAGAAAGCTGTGATTT 59.121 40.000 0.00 0.00 36.89 2.17
819 856 3.121030 GCAGATCTTGTGCGCGGT 61.121 61.111 8.83 0.00 0.00 5.68
820 857 3.084579 CAGATCTTGTGCGCGGTC 58.915 61.111 8.83 0.00 0.00 4.79
821 858 2.125512 AGATCTTGTGCGCGGTCC 60.126 61.111 8.83 0.00 0.00 4.46
822 859 3.554692 GATCTTGTGCGCGGTCCG 61.555 66.667 8.83 6.99 40.75 4.79
863 900 2.912956 TGGAGATCCCACCATTATAGCC 59.087 50.000 0.00 0.00 40.82 3.93
885 930 1.407258 CTCGTGTCCTCCAGATCTTCC 59.593 57.143 0.00 0.00 0.00 3.46
886 931 0.461961 CGTGTCCTCCAGATCTTCCC 59.538 60.000 0.00 0.00 0.00 3.97
899 944 5.128919 CAGATCTTCCCCTCAATTCGAAAT 58.871 41.667 0.00 0.00 0.00 2.17
919 964 1.955157 CCGTAACGGCGAACACCAA 60.955 57.895 16.62 0.00 41.17 3.67
928 973 1.658686 GCGAACACCAAACCACACCA 61.659 55.000 0.00 0.00 0.00 4.17
929 974 0.099791 CGAACACCAAACCACACCAC 59.900 55.000 0.00 0.00 0.00 4.16
930 975 1.178276 GAACACCAAACCACACCACA 58.822 50.000 0.00 0.00 0.00 4.17
931 976 0.892063 AACACCAAACCACACCACAC 59.108 50.000 0.00 0.00 0.00 3.82
932 977 0.968393 ACACCAAACCACACCACACC 60.968 55.000 0.00 0.00 0.00 4.16
933 978 0.967887 CACCAAACCACACCACACCA 60.968 55.000 0.00 0.00 0.00 4.17
934 979 0.968393 ACCAAACCACACCACACCAC 60.968 55.000 0.00 0.00 0.00 4.16
935 980 0.967887 CCAAACCACACCACACCACA 60.968 55.000 0.00 0.00 0.00 4.17
936 981 0.455410 CAAACCACACCACACCACAG 59.545 55.000 0.00 0.00 0.00 3.66
957 1002 0.036577 ACAGCACAGCACAGATCCTC 60.037 55.000 0.00 0.00 0.00 3.71
958 1003 0.743701 CAGCACAGCACAGATCCTCC 60.744 60.000 0.00 0.00 0.00 4.30
959 1004 1.451028 GCACAGCACAGATCCTCCC 60.451 63.158 0.00 0.00 0.00 4.30
960 1005 1.222936 CACAGCACAGATCCTCCCC 59.777 63.158 0.00 0.00 0.00 4.81
961 1006 1.997874 ACAGCACAGATCCTCCCCC 60.998 63.158 0.00 0.00 0.00 5.40
962 1007 1.692042 CAGCACAGATCCTCCCCCT 60.692 63.158 0.00 0.00 0.00 4.79
963 1008 1.383803 AGCACAGATCCTCCCCCTC 60.384 63.158 0.00 0.00 0.00 4.30
964 1009 2.447714 GCACAGATCCTCCCCCTCC 61.448 68.421 0.00 0.00 0.00 4.30
965 1010 1.768077 CACAGATCCTCCCCCTCCC 60.768 68.421 0.00 0.00 0.00 4.30
966 1011 2.122189 CAGATCCTCCCCCTCCCC 60.122 72.222 0.00 0.00 0.00 4.81
967 1012 2.289979 AGATCCTCCCCCTCCCCT 60.290 66.667 0.00 0.00 0.00 4.79
977 1022 2.210644 CCCCCTCCCCTGTATTTAACA 58.789 52.381 0.00 0.00 36.42 2.41
1078 1262 4.377760 TCCGCTTCCTCCTCCGGT 62.378 66.667 0.00 0.00 41.38 5.28
1127 1314 2.687909 GATCCCTCCCTCCCTCCCTG 62.688 70.000 0.00 0.00 0.00 4.45
1149 1343 4.340246 GCGTCCCCGAACCCCTTT 62.340 66.667 0.00 0.00 35.63 3.11
1153 1347 1.539372 TCCCCGAACCCCTTTGCTA 60.539 57.895 0.00 0.00 0.00 3.49
1156 1350 1.299976 CCGAACCCCTTTGCTAGCT 59.700 57.895 17.23 0.00 0.00 3.32
1165 1359 1.975363 CTTTGCTAGCTGCTCCGTGC 61.975 60.000 17.23 7.64 43.37 5.34
1201 1395 4.694233 CAGAGCCTGCTGTGCCGT 62.694 66.667 3.17 0.00 30.70 5.68
1202 1396 3.946201 AGAGCCTGCTGTGCCGTT 61.946 61.111 0.00 0.00 0.00 4.44
1203 1397 2.980233 GAGCCTGCTGTGCCGTTT 60.980 61.111 0.00 0.00 0.00 3.60
1204 1398 1.671054 GAGCCTGCTGTGCCGTTTA 60.671 57.895 0.00 0.00 0.00 2.01
1205 1399 1.002134 AGCCTGCTGTGCCGTTTAT 60.002 52.632 0.00 0.00 0.00 1.40
1206 1400 1.026718 AGCCTGCTGTGCCGTTTATC 61.027 55.000 0.00 0.00 0.00 1.75
1208 1402 0.729116 CCTGCTGTGCCGTTTATCTG 59.271 55.000 0.00 0.00 0.00 2.90
1209 1403 0.729116 CTGCTGTGCCGTTTATCTGG 59.271 55.000 0.00 0.00 0.00 3.86
1254 1462 2.682136 TGGGTTCTGCCGATCCGA 60.682 61.111 0.00 0.00 38.44 4.55
1287 1495 3.195698 GTCGGCGGCTGGTGATTC 61.196 66.667 3.23 0.00 0.00 2.52
1288 1496 3.390521 TCGGCGGCTGGTGATTCT 61.391 61.111 7.21 0.00 0.00 2.40
1289 1497 3.197790 CGGCGGCTGGTGATTCTG 61.198 66.667 7.61 0.00 0.00 3.02
1290 1498 2.268920 GGCGGCTGGTGATTCTGA 59.731 61.111 0.00 0.00 0.00 3.27
1335 1543 1.743252 CTCCTCCTTCGGTTGCTGC 60.743 63.158 0.00 0.00 0.00 5.25
1337 1545 2.037136 CCTCCTTCGGTTGCTGCTG 61.037 63.158 0.00 0.00 0.00 4.41
1338 1546 2.032528 TCCTTCGGTTGCTGCTGG 59.967 61.111 0.00 0.00 0.00 4.85
1339 1547 2.281761 CCTTCGGTTGCTGCTGGT 60.282 61.111 0.00 0.00 0.00 4.00
1340 1548 2.328099 CCTTCGGTTGCTGCTGGTC 61.328 63.158 0.00 0.00 0.00 4.02
1341 1549 2.281484 TTCGGTTGCTGCTGGTCC 60.281 61.111 0.00 0.00 0.00 4.46
1342 1550 3.113514 TTCGGTTGCTGCTGGTCCA 62.114 57.895 0.00 0.00 0.00 4.02
1343 1551 3.052082 CGGTTGCTGCTGGTCCAG 61.052 66.667 15.15 15.15 35.93 3.86
1451 1664 2.114838 GATGGGATCTGCCAGGCC 59.885 66.667 9.64 0.00 38.95 5.19
1461 1674 4.162690 GCCAGGCCACCGGAGTAG 62.163 72.222 9.46 0.00 0.00 2.57
1482 1695 2.640316 ATTGTCTAAATCGGGGAGGC 57.360 50.000 0.00 0.00 0.00 4.70
1484 1697 0.685131 TGTCTAAATCGGGGAGGCGA 60.685 55.000 0.00 0.00 0.00 5.54
1489 1702 3.682292 AATCGGGGAGGCGACTTGC 62.682 63.158 0.00 0.00 44.43 4.01
1491 1704 3.458163 CGGGGAGGCGACTTGCTA 61.458 66.667 0.00 0.00 44.43 3.49
1492 1705 2.187163 GGGGAGGCGACTTGCTAC 59.813 66.667 0.00 0.00 44.43 3.58
1493 1706 2.359967 GGGGAGGCGACTTGCTACT 61.360 63.158 0.00 0.00 44.43 2.57
1494 1707 1.597461 GGGAGGCGACTTGCTACTT 59.403 57.895 0.00 0.00 44.43 2.24
1495 1708 0.036294 GGGAGGCGACTTGCTACTTT 60.036 55.000 0.00 0.00 44.43 2.66
1534 1754 7.040409 GGAAACCAAGTGTAGAGTTCAATCATT 60.040 37.037 0.00 0.00 0.00 2.57
1535 1755 7.823745 AACCAAGTGTAGAGTTCAATCATTT 57.176 32.000 0.00 0.00 0.00 2.32
1619 1840 9.190317 GTCCAAATCTAAAATAAATCTCACCCT 57.810 33.333 0.00 0.00 0.00 4.34
1620 1841 9.189156 TCCAAATCTAAAATAAATCTCACCCTG 57.811 33.333 0.00 0.00 0.00 4.45
1621 1842 7.922811 CCAAATCTAAAATAAATCTCACCCTGC 59.077 37.037 0.00 0.00 0.00 4.85
1622 1843 7.588497 AATCTAAAATAAATCTCACCCTGCC 57.412 36.000 0.00 0.00 0.00 4.85
1623 1844 6.327386 TCTAAAATAAATCTCACCCTGCCT 57.673 37.500 0.00 0.00 0.00 4.75
1624 1845 6.122277 TCTAAAATAAATCTCACCCTGCCTG 58.878 40.000 0.00 0.00 0.00 4.85
1625 1846 4.591321 AAATAAATCTCACCCTGCCTGA 57.409 40.909 0.00 0.00 0.00 3.86
1626 1847 4.591321 AATAAATCTCACCCTGCCTGAA 57.409 40.909 0.00 0.00 0.00 3.02
1627 1848 4.803329 ATAAATCTCACCCTGCCTGAAT 57.197 40.909 0.00 0.00 0.00 2.57
1628 1849 5.912149 ATAAATCTCACCCTGCCTGAATA 57.088 39.130 0.00 0.00 0.00 1.75
1629 1850 3.567478 AATCTCACCCTGCCTGAATAC 57.433 47.619 0.00 0.00 0.00 1.89
1630 1851 2.254152 TCTCACCCTGCCTGAATACT 57.746 50.000 0.00 0.00 0.00 2.12
1664 1885 2.503895 ACTTGGGGAGCTGATTTCAG 57.496 50.000 0.00 3.13 46.40 3.02
1665 1886 1.988107 ACTTGGGGAGCTGATTTCAGA 59.012 47.619 11.70 0.00 46.59 3.27
1670 1891 0.942962 GGAGCTGATTTCAGATGCCG 59.057 55.000 11.70 0.00 43.41 5.69
1678 1899 2.325583 TTTCAGATGCCGTGGTATCC 57.674 50.000 12.61 0.00 37.85 2.59
1680 1901 0.689412 TCAGATGCCGTGGTATCCCA 60.689 55.000 12.61 0.00 37.85 4.37
1701 1923 6.102468 TCCCAGGGACATCATTATGAAATGTA 59.898 38.462 3.01 0.00 42.66 2.29
1703 1925 6.073058 CCAGGGACATCATTATGAAATGTACG 60.073 42.308 0.00 0.00 42.66 3.67
1725 1949 4.207224 CGGTCTAAATTCTAGATGTGCACG 59.793 45.833 13.13 0.00 0.00 5.34
1739 1963 4.712122 TGTGCACGTCATCATTCTAGTA 57.288 40.909 13.13 0.00 0.00 1.82
1740 1964 4.421058 TGTGCACGTCATCATTCTAGTAC 58.579 43.478 13.13 0.00 0.00 2.73
1790 2017 7.959689 ATGATGCTTGATTGTGTATACTCTC 57.040 36.000 4.17 0.00 0.00 3.20
1797 2024 7.518052 GCTTGATTGTGTATACTCTCATCTTGC 60.518 40.741 4.17 10.28 0.00 4.01
1805 2032 5.854010 ATACTCTCATCTTGCGGTCTTAA 57.146 39.130 0.00 0.00 0.00 1.85
1843 2070 3.243602 ACGGAACACACCAATTTTTAGCC 60.244 43.478 0.00 0.00 0.00 3.93
1915 2219 3.303132 CGTTAATTGAATAGCTCGGCACC 60.303 47.826 0.00 0.00 0.00 5.01
1917 2221 0.178068 ATTGAATAGCTCGGCACCGT 59.822 50.000 9.23 0.00 40.74 4.83
1950 2261 5.116528 GCGTGGTTCTTAATAGTGCAAAAAC 59.883 40.000 0.00 0.00 0.00 2.43
1977 2288 0.896940 AATTCCACCACTGCTGCTGG 60.897 55.000 11.29 8.81 34.62 4.85
1987 2298 3.446570 GCTGCTGGCACATGGACC 61.447 66.667 0.00 0.00 38.20 4.46
2265 2812 5.418840 GGTCCATTAATGTGATTGAAGTGGT 59.581 40.000 14.25 0.00 0.00 4.16
2322 2869 4.141711 TGCCAGCCTACTTTTATCCACTAG 60.142 45.833 0.00 0.00 0.00 2.57
2344 2891 8.709308 ACTAGCCTCATTAGTGATGAAAATACT 58.291 33.333 0.00 0.00 43.93 2.12
2373 2920 3.064682 GCTTAGAGCCTTAAAGCAAGAGC 59.935 47.826 7.00 0.00 43.98 4.09
2414 2961 4.589374 AGCTGTAGTTTCTCCTTACTGTGT 59.411 41.667 0.00 0.00 0.00 3.72
2415 2962 5.070580 AGCTGTAGTTTCTCCTTACTGTGTT 59.929 40.000 0.00 0.00 0.00 3.32
2416 2963 6.267014 AGCTGTAGTTTCTCCTTACTGTGTTA 59.733 38.462 0.00 0.00 0.00 2.41
2417 2964 7.038941 AGCTGTAGTTTCTCCTTACTGTGTTAT 60.039 37.037 0.00 0.00 0.00 1.89
2418 2965 7.603024 GCTGTAGTTTCTCCTTACTGTGTTATT 59.397 37.037 0.00 0.00 0.00 1.40
2478 3025 4.571984 TGATGAATAAGGTTGATGAGCACG 59.428 41.667 0.00 0.00 0.00 5.34
2580 3127 4.130286 AGCAAGATACCTAGCAGTGAAC 57.870 45.455 0.00 0.00 0.00 3.18
2583 3130 4.509600 GCAAGATACCTAGCAGTGAACATC 59.490 45.833 0.00 0.00 0.00 3.06
2606 3153 9.726232 CATCTGATGTAACAAGTAAATGATTGG 57.274 33.333 9.50 0.00 0.00 3.16
3314 3866 0.541392 TGAGCCATACTGTGCCGATT 59.459 50.000 0.00 0.00 0.00 3.34
3915 4468 2.851764 GCGACCATTTTGTTTCGTCGTT 60.852 45.455 9.33 0.00 46.02 3.85
3916 4469 3.604314 GCGACCATTTTGTTTCGTCGTTA 60.604 43.478 9.33 0.00 46.02 3.18
3945 4498 8.201464 GTGTTTACCATCTTATTATTTTGGGGG 58.799 37.037 0.00 0.00 0.00 5.40
4048 4602 8.911918 TTCCTACAAAGCAAAGTATTACTTGA 57.088 30.769 9.78 0.00 38.66 3.02
4072 4626 7.032377 AGTTTCCAGCTTTTGAAGAAAGTAG 57.968 36.000 0.00 0.00 30.37 2.57
4086 4667 3.201045 AGAAAGTAGCCCTGATCCCTTTC 59.799 47.826 0.00 0.00 38.55 2.62
4180 4773 2.349755 GCCTTGGGCCGTGTCTTA 59.650 61.111 0.00 0.00 44.06 2.10
4181 4774 2.038837 GCCTTGGGCCGTGTCTTAC 61.039 63.158 0.00 0.00 44.06 2.34
4182 4775 1.677552 CCTTGGGCCGTGTCTTACT 59.322 57.895 0.00 0.00 0.00 2.24
4183 4776 0.391263 CCTTGGGCCGTGTCTTACTC 60.391 60.000 0.00 0.00 0.00 2.59
4184 4777 0.391263 CTTGGGCCGTGTCTTACTCC 60.391 60.000 0.00 0.00 0.00 3.85
4185 4778 2.162338 TTGGGCCGTGTCTTACTCCG 62.162 60.000 0.00 0.00 0.00 4.63
4186 4779 2.643232 GGGCCGTGTCTTACTCCGT 61.643 63.158 0.00 0.00 0.00 4.69
4187 4780 1.445582 GGCCGTGTCTTACTCCGTG 60.446 63.158 0.00 0.00 0.00 4.94
4188 4781 1.288127 GCCGTGTCTTACTCCGTGT 59.712 57.895 0.00 0.00 0.00 4.49
4268 4864 1.299850 GCTTTCTGCGGCCGTTTTT 60.300 52.632 28.70 0.00 0.00 1.94
4269 4865 0.039888 GCTTTCTGCGGCCGTTTTTA 60.040 50.000 28.70 9.09 0.00 1.52
4315 4915 6.295719 TGAAGGAAAAGTAGGTCCTGTATC 57.704 41.667 0.00 0.00 43.75 2.24
4316 4916 5.105473 TGAAGGAAAAGTAGGTCCTGTATCG 60.105 44.000 0.00 0.00 43.75 2.92
4317 4917 3.132467 AGGAAAAGTAGGTCCTGTATCGC 59.868 47.826 0.00 0.00 42.87 4.58
4318 4918 3.132467 GGAAAAGTAGGTCCTGTATCGCT 59.868 47.826 0.00 0.00 0.00 4.93
4319 4919 4.382793 GGAAAAGTAGGTCCTGTATCGCTT 60.383 45.833 0.00 0.00 0.00 4.68
4320 4920 5.163478 GGAAAAGTAGGTCCTGTATCGCTTA 60.163 44.000 0.00 0.00 0.00 3.09
4344 4948 0.249911 AGAAGACGCCGCTTGTTCTT 60.250 50.000 3.67 0.00 0.00 2.52
4578 5195 0.652592 CGGTCTATTTCGGCTTGCTG 59.347 55.000 0.00 0.00 0.00 4.41
4684 5331 6.401474 GGCAGTATGTATGATGTTTATGCGAG 60.401 42.308 0.00 0.00 39.31 5.03
4687 5334 8.590470 CAGTATGTATGATGTTTATGCGAGATC 58.410 37.037 0.00 0.00 0.00 2.75
4699 5346 0.805322 GCGAGATCTGTGCCACTGAG 60.805 60.000 10.27 0.00 29.63 3.35
4722 5369 0.811281 CCGGAGGCTTTTGTGGAATC 59.189 55.000 0.00 0.00 46.14 2.52
4749 5401 4.382685 CCATCCATCTGCTTTGATGCTTTT 60.383 41.667 8.65 0.00 41.65 2.27
4750 5402 4.182693 TCCATCTGCTTTGATGCTTTTG 57.817 40.909 8.65 0.00 41.65 2.44
4751 5403 3.827876 TCCATCTGCTTTGATGCTTTTGA 59.172 39.130 8.65 0.63 41.65 2.69
4752 5404 4.082408 TCCATCTGCTTTGATGCTTTTGAG 60.082 41.667 8.65 0.00 41.65 3.02
4753 5405 4.321750 CCATCTGCTTTGATGCTTTTGAGT 60.322 41.667 8.65 0.00 41.65 3.41
4754 5406 4.494350 TCTGCTTTGATGCTTTTGAGTC 57.506 40.909 0.00 0.00 0.00 3.36
4758 5411 3.979495 GCTTTGATGCTTTTGAGTCTGTG 59.021 43.478 0.00 0.00 0.00 3.66
4768 5421 0.874175 TGAGTCTGTGTTTGTCGCCG 60.874 55.000 0.00 0.00 0.00 6.46
4778 5431 0.170116 TTTGTCGCCGCCAATGATTC 59.830 50.000 0.00 0.00 0.00 2.52
4779 5432 0.676466 TTGTCGCCGCCAATGATTCT 60.676 50.000 0.00 0.00 0.00 2.40
4783 5436 1.132262 TCGCCGCCAATGATTCTTTTC 59.868 47.619 0.00 0.00 0.00 2.29
4784 5437 1.135431 CGCCGCCAATGATTCTTTTCA 60.135 47.619 0.00 0.00 0.00 2.69
4785 5438 2.670789 CGCCGCCAATGATTCTTTTCAA 60.671 45.455 0.00 0.00 0.00 2.69
4786 5439 2.925563 GCCGCCAATGATTCTTTTCAAG 59.074 45.455 0.00 0.00 0.00 3.02
4787 5440 3.367292 GCCGCCAATGATTCTTTTCAAGA 60.367 43.478 0.00 0.00 35.26 3.02
4797 5450 3.447918 TCTTTTCAAGAACCTCGTCGT 57.552 42.857 0.00 0.00 33.83 4.34
4799 5452 1.860676 TTTCAAGAACCTCGTCGTGG 58.139 50.000 11.71 11.71 0.00 4.94
4801 5454 2.027625 CAAGAACCTCGTCGTGGGC 61.028 63.158 17.11 8.91 0.00 5.36
4803 5456 2.432628 GAACCTCGTCGTGGGCAG 60.433 66.667 17.11 0.00 0.00 4.85
4804 5457 3.934391 GAACCTCGTCGTGGGCAGG 62.934 68.421 17.11 6.82 0.00 4.85
4813 5466 4.284550 GTGGGCAGGGGCAGTTCA 62.285 66.667 0.00 0.00 43.71 3.18
4814 5467 4.284550 TGGGCAGGGGCAGTTCAC 62.285 66.667 0.00 0.00 43.71 3.18
4816 5469 4.284550 GGCAGGGGCAGTTCACCA 62.285 66.667 0.00 0.00 43.71 4.17
4817 5470 2.203480 GCAGGGGCAGTTCACCAA 60.203 61.111 0.00 0.00 40.72 3.67
4818 5471 2.270986 GCAGGGGCAGTTCACCAAG 61.271 63.158 0.00 0.00 40.72 3.61
4819 5472 1.455849 CAGGGGCAGTTCACCAAGA 59.544 57.895 0.00 0.00 0.00 3.02
4820 5473 0.178992 CAGGGGCAGTTCACCAAGAA 60.179 55.000 0.00 0.00 0.00 2.52
4821 5474 0.111253 AGGGGCAGTTCACCAAGAAG 59.889 55.000 0.00 0.00 36.78 2.85
4822 5475 0.110486 GGGGCAGTTCACCAAGAAGA 59.890 55.000 0.00 0.00 36.78 2.87
4823 5476 1.478654 GGGGCAGTTCACCAAGAAGAA 60.479 52.381 0.00 0.00 36.78 2.52
4824 5477 1.882623 GGGCAGTTCACCAAGAAGAAG 59.117 52.381 0.00 0.00 36.78 2.85
4825 5478 2.487265 GGGCAGTTCACCAAGAAGAAGA 60.487 50.000 0.00 0.00 36.78 2.87
4826 5479 2.810852 GGCAGTTCACCAAGAAGAAGAG 59.189 50.000 0.00 0.00 36.78 2.85
4827 5480 3.495100 GGCAGTTCACCAAGAAGAAGAGA 60.495 47.826 0.00 0.00 36.78 3.10
4828 5481 3.745458 GCAGTTCACCAAGAAGAAGAGAG 59.255 47.826 0.00 0.00 36.78 3.20
4829 5482 4.502259 GCAGTTCACCAAGAAGAAGAGAGA 60.502 45.833 0.00 0.00 36.78 3.10
4830 5483 5.792741 CAGTTCACCAAGAAGAAGAGAGAT 58.207 41.667 0.00 0.00 36.78 2.75
4831 5484 5.638657 CAGTTCACCAAGAAGAAGAGAGATG 59.361 44.000 0.00 0.00 36.78 2.90
4832 5485 5.541868 AGTTCACCAAGAAGAAGAGAGATGA 59.458 40.000 0.00 0.00 36.78 2.92
4833 5486 6.213195 AGTTCACCAAGAAGAAGAGAGATGAT 59.787 38.462 0.00 0.00 36.78 2.45
4834 5487 6.219417 TCACCAAGAAGAAGAGAGATGATC 57.781 41.667 0.00 0.00 0.00 2.92
4835 5488 5.957168 TCACCAAGAAGAAGAGAGATGATCT 59.043 40.000 0.00 0.00 42.61 2.75
4836 5489 7.122048 TCACCAAGAAGAAGAGAGATGATCTA 58.878 38.462 0.00 0.00 38.84 1.98
4837 5490 7.285172 TCACCAAGAAGAAGAGAGATGATCTAG 59.715 40.741 0.00 0.00 38.84 2.43
4838 5491 7.068593 CACCAAGAAGAAGAGAGATGATCTAGT 59.931 40.741 0.00 0.00 38.84 2.57
4839 5492 7.619302 ACCAAGAAGAAGAGAGATGATCTAGTT 59.381 37.037 0.00 0.00 38.84 2.24
4840 5493 8.477256 CCAAGAAGAAGAGAGATGATCTAGTTT 58.523 37.037 0.00 0.00 38.84 2.66
4873 5526 9.471084 AAAATCAAACCTAAAATCCTAACAACG 57.529 29.630 0.00 0.00 0.00 4.10
4874 5527 6.004408 TCAAACCTAAAATCCTAACAACGC 57.996 37.500 0.00 0.00 0.00 4.84
4875 5528 5.048573 TCAAACCTAAAATCCTAACAACGCC 60.049 40.000 0.00 0.00 0.00 5.68
4876 5529 3.004862 ACCTAAAATCCTAACAACGCCG 58.995 45.455 0.00 0.00 0.00 6.46
4877 5530 2.353579 CCTAAAATCCTAACAACGCCGG 59.646 50.000 0.00 0.00 0.00 6.13
4878 5531 1.900245 AAAATCCTAACAACGCCGGT 58.100 45.000 1.90 0.00 0.00 5.28
4879 5532 1.900245 AAATCCTAACAACGCCGGTT 58.100 45.000 1.90 0.00 36.63 4.44
4880 5533 1.900245 AATCCTAACAACGCCGGTTT 58.100 45.000 1.90 0.00 32.98 3.27
4881 5534 2.766345 ATCCTAACAACGCCGGTTTA 57.234 45.000 1.90 0.00 32.98 2.01
4882 5535 2.766345 TCCTAACAACGCCGGTTTAT 57.234 45.000 1.90 0.00 32.98 1.40
4883 5536 3.056588 TCCTAACAACGCCGGTTTATT 57.943 42.857 1.90 0.00 32.98 1.40
4884 5537 3.410508 TCCTAACAACGCCGGTTTATTT 58.589 40.909 1.90 0.00 32.98 1.40
4885 5538 3.819902 TCCTAACAACGCCGGTTTATTTT 59.180 39.130 1.90 0.00 32.98 1.82
4886 5539 4.999950 TCCTAACAACGCCGGTTTATTTTA 59.000 37.500 1.90 0.00 32.98 1.52
4887 5540 5.647225 TCCTAACAACGCCGGTTTATTTTAT 59.353 36.000 1.90 0.00 32.98 1.40
4888 5541 6.150809 TCCTAACAACGCCGGTTTATTTTATT 59.849 34.615 1.90 0.00 32.98 1.40
4889 5542 6.807720 CCTAACAACGCCGGTTTATTTTATTT 59.192 34.615 1.90 0.00 32.98 1.40
4890 5543 7.328982 CCTAACAACGCCGGTTTATTTTATTTT 59.671 33.333 1.90 0.00 32.98 1.82
4891 5544 9.339492 CTAACAACGCCGGTTTATTTTATTTTA 57.661 29.630 1.90 0.00 32.98 1.52
4892 5545 8.760103 AACAACGCCGGTTTATTTTATTTTAT 57.240 26.923 1.90 0.00 32.98 1.40
4893 5546 8.760103 ACAACGCCGGTTTATTTTATTTTATT 57.240 26.923 1.90 0.00 32.98 1.40
4894 5547 9.205719 ACAACGCCGGTTTATTTTATTTTATTT 57.794 25.926 1.90 0.00 32.98 1.40
4909 5562 9.457436 TTTATTTTATTTTAACCGAGGAGCTCT 57.543 29.630 14.64 0.00 0.00 4.09
4910 5563 7.939784 ATTTTATTTTAACCGAGGAGCTCTT 57.060 32.000 14.64 5.66 0.00 2.85
4911 5564 7.754851 TTTTATTTTAACCGAGGAGCTCTTT 57.245 32.000 14.64 1.93 0.00 2.52
4912 5565 7.754851 TTTATTTTAACCGAGGAGCTCTTTT 57.245 32.000 14.64 0.00 0.00 2.27
4913 5566 7.754851 TTATTTTAACCGAGGAGCTCTTTTT 57.245 32.000 14.64 3.79 0.00 1.94
4914 5567 5.684550 TTTTAACCGAGGAGCTCTTTTTC 57.315 39.130 14.64 5.91 0.00 2.29
4915 5568 4.618920 TTAACCGAGGAGCTCTTTTTCT 57.381 40.909 14.64 0.75 0.00 2.52
4916 5569 5.733620 TTAACCGAGGAGCTCTTTTTCTA 57.266 39.130 14.64 0.00 0.00 2.10
4917 5570 4.828072 AACCGAGGAGCTCTTTTTCTAT 57.172 40.909 14.64 0.00 0.00 1.98
4918 5571 4.828072 ACCGAGGAGCTCTTTTTCTATT 57.172 40.909 14.64 0.00 0.00 1.73
4919 5572 5.934402 ACCGAGGAGCTCTTTTTCTATTA 57.066 39.130 14.64 0.00 0.00 0.98
4920 5573 5.908341 ACCGAGGAGCTCTTTTTCTATTAG 58.092 41.667 14.64 0.00 0.00 1.73
4958 5611 7.608761 GGTTAGTTACATCTACAACCCAAATGA 59.391 37.037 0.00 0.00 0.00 2.57
4966 5619 6.546428 TCTACAACCCAAATGAAAACCAAA 57.454 33.333 0.00 0.00 0.00 3.28
4989 5642 3.426426 CCTTTCGTGGTTCAAAAACGTGA 60.426 43.478 0.00 0.00 38.43 4.35
4992 5645 3.490399 TCGTGGTTCAAAAACGTGAAAC 58.510 40.909 0.00 0.00 44.11 2.78
5025 5678 7.231115 TCAATCATCATTTGTCAGGACTTTTCA 59.769 33.333 0.65 0.00 0.00 2.69
5026 5679 6.957920 TCATCATTTGTCAGGACTTTTCAA 57.042 33.333 0.65 0.00 0.00 2.69
5044 5697 5.767816 TTCAAGGTAAGTTCTTTGGCTTC 57.232 39.130 0.00 0.00 0.00 3.86
5048 5701 3.071167 AGGTAAGTTCTTTGGCTTCGACT 59.929 43.478 0.00 0.00 0.00 4.18
5059 5712 2.565391 TGGCTTCGACTGGACATTTAGA 59.435 45.455 0.00 0.00 0.00 2.10
5085 5739 1.053835 TGCTATTCCCGCATCCAGGA 61.054 55.000 0.00 0.00 31.40 3.86
5088 5742 0.399949 TATTCCCGCATCCAGGAGGT 60.400 55.000 2.38 0.00 35.89 3.85
5102 5757 2.941064 CAGGAGGTAGTACGTTCGATGA 59.059 50.000 0.00 0.00 0.00 2.92
5111 5766 9.374838 AGGTAGTACGTTCGATGAAATAATTTT 57.625 29.630 0.00 0.00 0.00 1.82
5156 5817 4.397348 CCCCTTTTGACGGGTCAG 57.603 61.111 1.37 0.00 41.13 3.51
5159 5820 0.107831 CCCTTTTGACGGGTCAGTGA 59.892 55.000 1.37 0.00 41.13 3.41
5163 5824 4.069304 CCTTTTGACGGGTCAGTGAAATA 58.931 43.478 0.00 0.00 41.13 1.40
5270 5948 1.002792 GAAAGTTTGTGGCTGACCGAC 60.003 52.381 0.00 0.00 39.70 4.79
5278 5956 2.887568 GCTGACCGACATGGCTCG 60.888 66.667 0.00 0.00 43.94 5.03
5323 6118 2.093235 TCATTGCCGGTCACATGTATCA 60.093 45.455 1.90 0.00 0.00 2.15
5346 6141 2.556622 ACTAACTTTGGAATTGGGCACG 59.443 45.455 0.00 0.00 0.00 5.34
5353 6429 2.925724 TGGAATTGGGCACGGTATTAG 58.074 47.619 0.00 0.00 0.00 1.73
5435 6759 4.837896 TTACGGCACAATCAACAATTCA 57.162 36.364 0.00 0.00 0.00 2.57
5444 6768 6.951530 GCACAATCAACAATTCAATTCATTCG 59.048 34.615 0.00 0.00 0.00 3.34
5446 6770 8.701540 CACAATCAACAATTCAATTCATTCGAA 58.298 29.630 0.00 0.00 35.05 3.71
5447 6771 8.918658 ACAATCAACAATTCAATTCATTCGAAG 58.081 29.630 3.35 0.00 33.74 3.79
5448 6772 8.918658 CAATCAACAATTCAATTCATTCGAAGT 58.081 29.630 3.35 0.00 33.74 3.01
5449 6773 8.679288 ATCAACAATTCAATTCATTCGAAGTC 57.321 30.769 3.35 0.00 33.74 3.01
5451 6775 5.088739 ACAATTCAATTCATTCGAAGTCGC 58.911 37.500 3.35 0.00 39.60 5.19
5456 6780 1.336877 TTCATTCGAAGTCGCTCACG 58.663 50.000 3.35 0.00 39.60 4.35
5457 6781 0.240145 TCATTCGAAGTCGCTCACGT 59.760 50.000 3.35 0.00 41.18 4.49
5458 6782 1.465777 TCATTCGAAGTCGCTCACGTA 59.534 47.619 3.35 0.00 41.18 3.57
5462 6786 2.001872 TCGAAGTCGCTCACGTACATA 58.998 47.619 0.00 0.00 41.18 2.29
5463 6787 2.416202 TCGAAGTCGCTCACGTACATAA 59.584 45.455 0.00 0.00 41.18 1.90
5464 6788 2.776765 CGAAGTCGCTCACGTACATAAG 59.223 50.000 0.00 0.00 41.18 1.73
5466 6790 1.471287 AGTCGCTCACGTACATAAGCA 59.529 47.619 10.02 0.00 41.18 3.91
5467 6791 2.099263 AGTCGCTCACGTACATAAGCAT 59.901 45.455 10.02 0.00 41.18 3.79
5468 6792 3.314357 AGTCGCTCACGTACATAAGCATA 59.686 43.478 10.02 0.00 41.18 3.14
5469 6793 3.421231 GTCGCTCACGTACATAAGCATAC 59.579 47.826 10.02 4.86 41.18 2.39
5470 6794 3.065648 TCGCTCACGTACATAAGCATACA 59.934 43.478 10.02 0.00 41.18 2.29
5471 6795 3.179795 CGCTCACGTACATAAGCATACAC 59.820 47.826 10.02 0.00 34.39 2.90
5472 6796 4.360563 GCTCACGTACATAAGCATACACT 58.639 43.478 5.70 0.00 34.86 3.55
5473 6797 4.441415 GCTCACGTACATAAGCATACACTC 59.559 45.833 5.70 0.00 34.86 3.51
5474 6798 5.570234 TCACGTACATAAGCATACACTCA 57.430 39.130 0.00 0.00 0.00 3.41
5475 6799 5.337554 TCACGTACATAAGCATACACTCAC 58.662 41.667 0.00 0.00 0.00 3.51
5476 6800 4.503007 CACGTACATAAGCATACACTCACC 59.497 45.833 0.00 0.00 0.00 4.02
5478 6802 4.202121 CGTACATAAGCATACACTCACCCT 60.202 45.833 0.00 0.00 0.00 4.34
5479 6803 4.844349 ACATAAGCATACACTCACCCTT 57.156 40.909 0.00 0.00 0.00 3.95
5480 6804 5.950544 ACATAAGCATACACTCACCCTTA 57.049 39.130 0.00 0.00 0.00 2.69
5481 6805 6.500589 ACATAAGCATACACTCACCCTTAT 57.499 37.500 0.00 0.00 0.00 1.73
5482 6806 6.291377 ACATAAGCATACACTCACCCTTATG 58.709 40.000 13.59 13.59 43.56 1.90
5483 6807 6.099701 ACATAAGCATACACTCACCCTTATGA 59.900 38.462 19.24 0.00 41.94 2.15
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.033504 CACAGTCAACGGGTGCTAGT 59.966 55.000 0.00 0.00 0.00 2.57
1 2 0.317160 TCACAGTCAACGGGTGCTAG 59.683 55.000 0.00 0.00 32.69 3.42
6 7 0.389391 CTCAGTCACAGTCAACGGGT 59.611 55.000 0.00 0.00 0.00 5.28
15 16 0.900421 TCATGGAGCCTCAGTCACAG 59.100 55.000 0.00 0.00 0.00 3.66
18 19 0.907486 CCTTCATGGAGCCTCAGTCA 59.093 55.000 0.00 0.00 38.35 3.41
60 61 1.237285 GCCATCAAGTGCCGTTCAGT 61.237 55.000 0.00 0.00 0.00 3.41
68 69 0.459585 CATTGCCAGCCATCAAGTGC 60.460 55.000 0.00 0.00 0.00 4.40
80 81 2.755064 CGCCCACCATCATTGCCA 60.755 61.111 0.00 0.00 0.00 4.92
85 86 4.856801 GTCCGCGCCCACCATCAT 62.857 66.667 0.00 0.00 0.00 2.45
117 118 4.323477 TACGCCGCCCAACAGCTT 62.323 61.111 0.00 0.00 0.00 3.74
155 156 3.054166 TCGTTTGTTCAATCGTCGATGT 58.946 40.909 8.83 0.00 0.00 3.06
161 162 1.600485 GGGTGTCGTTTGTTCAATCGT 59.400 47.619 13.21 0.00 0.00 3.73
199 200 4.051167 TCGGTACCTCCTCCGCCA 62.051 66.667 10.90 0.00 45.44 5.69
201 202 2.439883 ACTCGGTACCTCCTCCGC 60.440 66.667 10.90 0.00 45.44 5.54
202 203 1.077930 TCACTCGGTACCTCCTCCG 60.078 63.158 10.90 0.00 46.93 4.63
203 204 1.036481 GGTCACTCGGTACCTCCTCC 61.036 65.000 10.90 1.43 32.72 4.30
204 205 1.375098 CGGTCACTCGGTACCTCCTC 61.375 65.000 10.90 0.00 33.34 3.71
266 267 1.528076 TTGATGGCACGCAACACCT 60.528 52.632 0.00 0.00 0.00 4.00
325 332 4.363990 CAGTGTCGCGACAGGGCT 62.364 66.667 39.98 29.79 42.74 5.19
337 344 1.671054 CCATTTCGCCGTCCAGTGT 60.671 57.895 0.00 0.00 0.00 3.55
353 360 4.339814 GGTACTTTTTGTCATCCAACACCA 59.660 41.667 0.00 0.00 31.20 4.17
418 426 1.810151 GAGCGGCTTTTGATTGTACCA 59.190 47.619 2.97 0.00 0.00 3.25
419 427 1.810151 TGAGCGGCTTTTGATTGTACC 59.190 47.619 2.97 0.00 0.00 3.34
427 435 1.535028 TGTACATGTGAGCGGCTTTTG 59.465 47.619 9.11 2.53 0.00 2.44
431 439 1.021390 GCTTGTACATGTGAGCGGCT 61.021 55.000 9.11 0.00 0.00 5.52
432 440 1.298157 TGCTTGTACATGTGAGCGGC 61.298 55.000 9.11 7.11 37.94 6.53
434 442 2.034591 CGTATGCTTGTACATGTGAGCG 60.035 50.000 9.11 7.72 37.94 5.03
435 443 2.285834 GCGTATGCTTGTACATGTGAGC 60.286 50.000 18.30 18.30 38.39 4.26
436 444 3.575858 GCGTATGCTTGTACATGTGAG 57.424 47.619 9.11 5.02 38.39 3.51
455 463 0.801251 GCGCATTCATAGGGATGAGC 59.199 55.000 8.64 8.64 43.03 4.26
473 481 4.130281 GACAAGGTACGCGTGCGC 62.130 66.667 24.59 14.60 44.19 6.09
481 489 2.158943 GGTGCTCATAGGGACAAGGTAC 60.159 54.545 0.00 0.00 0.00 3.34
486 494 1.204146 GGAGGTGCTCATAGGGACAA 58.796 55.000 0.00 0.00 31.08 3.18
488 496 0.755698 TCGGAGGTGCTCATAGGGAC 60.756 60.000 0.00 0.00 31.08 4.46
544 552 3.127533 GAGGCGCATGTGGTGACC 61.128 66.667 10.83 0.00 34.72 4.02
564 572 2.273912 GGAGACGTTCCCACCGACT 61.274 63.158 0.00 0.00 40.37 4.18
574 582 1.532316 TTCGGTGGGAGGAGACGTT 60.532 57.895 0.00 0.00 0.00 3.99
575 583 2.116772 TTCGGTGGGAGGAGACGT 59.883 61.111 0.00 0.00 0.00 4.34
589 597 0.651551 TTTTCGGTGGTGTTCGTTCG 59.348 50.000 0.00 0.00 0.00 3.95
599 607 6.926313 TGGATTTATTTTAGGTTTTCGGTGG 58.074 36.000 0.00 0.00 0.00 4.61
601 609 6.949463 TCCTGGATTTATTTTAGGTTTTCGGT 59.051 34.615 0.00 0.00 0.00 4.69
608 616 9.774413 CGTAGTATTCCTGGATTTATTTTAGGT 57.226 33.333 0.00 0.00 0.00 3.08
624 632 3.793559 ACATTGGTGCTCGTAGTATTCC 58.206 45.455 0.00 0.00 0.00 3.01
630 638 2.668457 GACTTGACATTGGTGCTCGTAG 59.332 50.000 0.00 0.00 0.00 3.51
632 640 1.070758 AGACTTGACATTGGTGCTCGT 59.929 47.619 0.00 0.00 0.00 4.18
635 643 4.623932 TTCTAGACTTGACATTGGTGCT 57.376 40.909 0.00 0.00 0.00 4.40
646 654 7.560368 AGTGGTATCCTCAAATTCTAGACTTG 58.440 38.462 7.24 7.24 0.00 3.16
672 702 6.633325 CCAATCTATGGTGATTAGGAGGAT 57.367 41.667 0.00 0.00 44.85 3.24
686 721 5.527214 TCCTAAATGTGCGAACCAATCTATG 59.473 40.000 0.00 0.00 0.00 2.23
706 741 2.742053 GCAACTCATCAAAACGCTCCTA 59.258 45.455 0.00 0.00 0.00 2.94
709 746 1.401539 GGGCAACTCATCAAAACGCTC 60.402 52.381 0.00 0.00 0.00 5.03
712 749 1.336440 TGTGGGCAACTCATCAAAACG 59.664 47.619 0.00 0.00 0.00 3.60
722 759 3.620966 GCTTTCTCTCTATGTGGGCAACT 60.621 47.826 0.00 0.00 0.00 3.16
723 760 2.680339 GCTTTCTCTCTATGTGGGCAAC 59.320 50.000 0.00 0.00 0.00 4.17
724 761 2.573462 AGCTTTCTCTCTATGTGGGCAA 59.427 45.455 0.00 0.00 0.00 4.52
725 762 2.093288 CAGCTTTCTCTCTATGTGGGCA 60.093 50.000 0.00 0.00 0.00 5.36
726 763 2.093235 ACAGCTTTCTCTCTATGTGGGC 60.093 50.000 0.00 0.00 0.00 5.36
727 764 3.196469 TCACAGCTTTCTCTCTATGTGGG 59.804 47.826 3.57 0.00 38.78 4.61
728 765 4.462508 TCACAGCTTTCTCTCTATGTGG 57.537 45.455 3.57 0.00 38.78 4.17
729 766 6.981762 AAATCACAGCTTTCTCTCTATGTG 57.018 37.500 0.00 0.00 39.44 3.21
730 767 7.124901 TCCTAAATCACAGCTTTCTCTCTATGT 59.875 37.037 0.00 0.00 0.00 2.29
731 768 7.437862 GTCCTAAATCACAGCTTTCTCTCTATG 59.562 40.741 0.00 0.00 0.00 2.23
732 769 7.124901 TGTCCTAAATCACAGCTTTCTCTCTAT 59.875 37.037 0.00 0.00 0.00 1.98
733 770 6.437477 TGTCCTAAATCACAGCTTTCTCTCTA 59.563 38.462 0.00 0.00 0.00 2.43
734 771 5.247110 TGTCCTAAATCACAGCTTTCTCTCT 59.753 40.000 0.00 0.00 0.00 3.10
735 772 5.482908 TGTCCTAAATCACAGCTTTCTCTC 58.517 41.667 0.00 0.00 0.00 3.20
744 781 6.322456 TCTCATCTACCTGTCCTAAATCACAG 59.678 42.308 0.00 0.00 39.90 3.66
752 789 3.181417 CCCCATCTCATCTACCTGTCCTA 60.181 52.174 0.00 0.00 0.00 2.94
776 813 0.784778 CAACGCACGTTCTCTCTTCC 59.215 55.000 5.28 0.00 36.00 3.46
777 814 0.784778 CCAACGCACGTTCTCTCTTC 59.215 55.000 5.28 0.00 36.00 2.87
778 815 1.222115 GCCAACGCACGTTCTCTCTT 61.222 55.000 5.28 0.00 36.00 2.85
779 816 1.664965 GCCAACGCACGTTCTCTCT 60.665 57.895 5.28 0.00 36.00 3.10
800 837 2.097160 CGCGCACAAGATCTGCAC 59.903 61.111 8.75 0.00 34.00 4.57
830 867 0.250081 GATCTCCAACGGATCTGCCC 60.250 60.000 0.00 0.00 37.28 5.36
831 868 0.250081 GGATCTCCAACGGATCTGCC 60.250 60.000 0.00 0.00 39.41 4.85
842 879 2.912956 GGCTATAATGGTGGGATCTCCA 59.087 50.000 0.00 7.13 44.79 3.86
863 900 0.396417 AGATCTGGAGGACACGAGGG 60.396 60.000 0.00 0.00 0.00 4.30
885 930 4.493545 CGTTACGGAATTTCGAATTGAGGG 60.494 45.833 14.41 0.00 0.00 4.30
886 931 4.574759 CGTTACGGAATTTCGAATTGAGG 58.425 43.478 14.41 0.00 0.00 3.86
919 964 1.752694 GCTGTGGTGTGGTGTGGTT 60.753 57.895 0.00 0.00 0.00 3.67
928 973 1.820906 CTGTGCTGTGCTGTGGTGT 60.821 57.895 0.00 0.00 0.00 4.16
929 974 3.028130 CTGTGCTGTGCTGTGGTG 58.972 61.111 0.00 0.00 0.00 4.17
930 975 2.903855 GCTGTGCTGTGCTGTGGT 60.904 61.111 0.00 0.00 0.00 4.16
931 976 2.903350 TGCTGTGCTGTGCTGTGG 60.903 61.111 0.00 0.00 0.00 4.17
932 977 2.330393 GTGCTGTGCTGTGCTGTG 59.670 61.111 0.00 0.00 0.00 3.66
933 978 2.124612 TGTGCTGTGCTGTGCTGT 60.125 55.556 0.00 0.00 0.00 4.40
934 979 1.235281 ATCTGTGCTGTGCTGTGCTG 61.235 55.000 0.00 0.00 0.00 4.41
935 980 0.954449 GATCTGTGCTGTGCTGTGCT 60.954 55.000 0.00 0.00 0.00 4.40
936 981 1.500844 GATCTGTGCTGTGCTGTGC 59.499 57.895 0.00 0.00 0.00 4.57
957 1002 2.092049 GTGTTAAATACAGGGGAGGGGG 60.092 54.545 0.00 0.00 37.45 5.40
958 1003 2.420967 CGTGTTAAATACAGGGGAGGGG 60.421 54.545 0.00 0.00 38.63 4.79
959 1004 2.502538 TCGTGTTAAATACAGGGGAGGG 59.497 50.000 0.00 0.00 41.75 4.30
960 1005 3.528532 GTCGTGTTAAATACAGGGGAGG 58.471 50.000 0.00 0.00 41.75 4.30
961 1006 3.184541 CGTCGTGTTAAATACAGGGGAG 58.815 50.000 0.00 0.00 41.75 4.30
962 1007 2.674747 GCGTCGTGTTAAATACAGGGGA 60.675 50.000 0.00 0.00 41.75 4.81
963 1008 1.662122 GCGTCGTGTTAAATACAGGGG 59.338 52.381 0.00 0.00 41.75 4.79
964 1009 2.093152 GTGCGTCGTGTTAAATACAGGG 59.907 50.000 0.00 0.00 41.75 4.45
965 1010 2.093152 GGTGCGTCGTGTTAAATACAGG 59.907 50.000 0.00 0.00 42.57 4.00
966 1011 2.093152 GGGTGCGTCGTGTTAAATACAG 59.907 50.000 0.00 0.00 37.45 2.74
967 1012 2.067766 GGGTGCGTCGTGTTAAATACA 58.932 47.619 0.00 0.00 0.00 2.29
977 1022 3.700831 TTGGGTTTGGGTGCGTCGT 62.701 57.895 0.00 0.00 0.00 4.34
1019 1189 3.670377 GGCGTGGAAAGTGGTGGC 61.670 66.667 0.00 0.00 0.00 5.01
1021 1191 1.966451 GGAGGCGTGGAAAGTGGTG 60.966 63.158 0.00 0.00 0.00 4.17
1022 1192 2.430367 GGAGGCGTGGAAAGTGGT 59.570 61.111 0.00 0.00 0.00 4.16
1049 1219 4.813235 AGCGGAGAGGAGCTCGCT 62.813 66.667 11.51 11.51 44.91 4.93
1050 1220 3.766496 GAAGCGGAGAGGAGCTCGC 62.766 68.421 7.83 7.42 44.91 5.03
1052 1222 1.734388 GAGGAAGCGGAGAGGAGCTC 61.734 65.000 4.71 4.71 43.78 4.09
1053 1223 1.756561 GAGGAAGCGGAGAGGAGCT 60.757 63.158 0.00 0.00 46.97 4.09
1059 1243 2.440430 CGGAGGAGGAAGCGGAGA 60.440 66.667 0.00 0.00 0.00 3.71
1092 1276 2.925162 GATCGAACCTTGGGGAGCGG 62.925 65.000 0.00 0.00 35.03 5.52
1134 1328 1.844544 TAGCAAAGGGGTTCGGGGAC 61.845 60.000 0.00 0.00 0.00 4.46
1185 1379 2.111999 TAAACGGCACAGCAGGCTCT 62.112 55.000 0.00 0.00 0.00 4.09
1190 1384 0.729116 CCAGATAAACGGCACAGCAG 59.271 55.000 0.00 0.00 0.00 4.24
1199 1393 2.701006 CACGCCGCCAGATAAACG 59.299 61.111 0.00 0.00 0.00 3.60
1200 1394 0.814010 ATCCACGCCGCCAGATAAAC 60.814 55.000 0.00 0.00 0.00 2.01
1201 1395 0.531974 GATCCACGCCGCCAGATAAA 60.532 55.000 0.00 0.00 0.00 1.40
1202 1396 1.069090 GATCCACGCCGCCAGATAA 59.931 57.895 0.00 0.00 0.00 1.75
1203 1397 1.832608 AGATCCACGCCGCCAGATA 60.833 57.895 0.00 0.00 0.00 1.98
1204 1398 3.157252 AGATCCACGCCGCCAGAT 61.157 61.111 0.00 0.00 0.00 2.90
1205 1399 4.147449 CAGATCCACGCCGCCAGA 62.147 66.667 0.00 0.00 0.00 3.86
1237 1445 2.682136 TCGGATCGGCAGAACCCA 60.682 61.111 7.55 0.00 36.09 4.51
1284 1492 4.393062 CGCAGTGACTAACCAAATCAGAAT 59.607 41.667 0.00 0.00 0.00 2.40
1285 1493 3.745975 CGCAGTGACTAACCAAATCAGAA 59.254 43.478 0.00 0.00 0.00 3.02
1286 1494 3.006430 TCGCAGTGACTAACCAAATCAGA 59.994 43.478 0.00 0.00 0.00 3.27
1287 1495 3.325870 TCGCAGTGACTAACCAAATCAG 58.674 45.455 0.00 0.00 0.00 2.90
1288 1496 3.394674 TCGCAGTGACTAACCAAATCA 57.605 42.857 0.00 0.00 0.00 2.57
1289 1497 4.742438 TTTCGCAGTGACTAACCAAATC 57.258 40.909 0.00 0.00 0.00 2.17
1290 1498 4.082787 CCATTTCGCAGTGACTAACCAAAT 60.083 41.667 0.00 0.00 0.00 2.32
1349 1557 4.688419 CCAACGCAACAGCCGCTG 62.688 66.667 19.08 19.08 37.52 5.18
1352 1560 4.326766 CACCCAACGCAACAGCCG 62.327 66.667 0.00 0.00 0.00 5.52
1383 1591 4.332637 CTGTGCTTGCACCACGCC 62.333 66.667 21.01 0.00 41.33 5.68
1446 1659 1.120530 AATACTACTCCGGTGGCCTG 58.879 55.000 3.32 0.00 0.00 4.85
1451 1664 5.913514 CGATTTAGACAATACTACTCCGGTG 59.086 44.000 0.00 0.00 0.00 4.94
1461 1674 3.400255 GCCTCCCCGATTTAGACAATAC 58.600 50.000 0.00 0.00 0.00 1.89
1482 1695 4.245660 TGGATCAAGAAAGTAGCAAGTCG 58.754 43.478 0.00 0.00 0.00 4.18
1484 1697 5.006386 CCTTGGATCAAGAAAGTAGCAAGT 58.994 41.667 9.01 0.00 43.42 3.16
1489 1702 4.844349 TCCCCTTGGATCAAGAAAGTAG 57.156 45.455 9.01 0.00 43.42 2.57
1490 1703 5.321927 GTTTCCCCTTGGATCAAGAAAGTA 58.678 41.667 9.01 0.00 43.42 2.24
1491 1704 4.152647 GTTTCCCCTTGGATCAAGAAAGT 58.847 43.478 9.01 0.00 43.42 2.66
1492 1705 3.511540 GGTTTCCCCTTGGATCAAGAAAG 59.488 47.826 9.01 0.00 43.42 2.62
1493 1706 3.116939 TGGTTTCCCCTTGGATCAAGAAA 60.117 43.478 9.01 0.58 43.42 2.52
1494 1707 2.448961 TGGTTTCCCCTTGGATCAAGAA 59.551 45.455 9.01 0.00 43.42 2.52
1495 1708 2.069775 TGGTTTCCCCTTGGATCAAGA 58.930 47.619 9.01 0.00 43.42 3.02
1534 1754 4.346418 ACAGTTGATGCCAAACCCATTTAA 59.654 37.500 0.00 0.00 33.49 1.52
1535 1755 3.900601 ACAGTTGATGCCAAACCCATTTA 59.099 39.130 0.00 0.00 33.49 1.40
1657 1878 2.808543 GGATACCACGGCATCTGAAATC 59.191 50.000 0.00 0.00 0.00 2.17
1678 1899 6.073058 CGTACATTTCATAATGATGTCCCTGG 60.073 42.308 4.99 0.00 43.12 4.45
1680 1901 5.997746 CCGTACATTTCATAATGATGTCCCT 59.002 40.000 4.99 0.00 43.12 4.20
1701 1923 5.109903 GTGCACATCTAGAATTTAGACCGT 58.890 41.667 13.17 0.51 0.00 4.83
1703 1925 5.109903 ACGTGCACATCTAGAATTTAGACC 58.890 41.667 18.64 0.00 0.00 3.85
1712 1934 4.098501 AGAATGATGACGTGCACATCTAGA 59.901 41.667 18.64 0.00 42.89 2.43
1762 1989 9.212641 GAGTATACACAATCAAGCATCATACAT 57.787 33.333 5.50 0.00 0.00 2.29
1772 1999 7.306457 CGCAAGATGAGAGTATACACAATCAAG 60.306 40.741 5.50 5.02 43.02 3.02
1790 2017 4.701956 ACCATTTTAAGACCGCAAGATG 57.298 40.909 0.00 0.00 43.02 2.90
1797 2024 7.849026 CGTAATACATGAACCATTTTAAGACCG 59.151 37.037 0.00 0.00 0.00 4.79
1805 2032 6.431543 TGTGTTCCGTAATACATGAACCATTT 59.568 34.615 15.60 0.00 37.01 2.32
1869 2173 7.019418 CGCCATTGTGATATGATGTGATTAAG 58.981 38.462 0.00 0.00 0.00 1.85
1887 2191 4.905866 CGAGCTATTCAATTAACGCCATTG 59.094 41.667 0.00 0.00 33.55 2.82
1915 2219 1.006571 AACCACGCACTGAGGTACG 60.007 57.895 0.00 0.00 41.09 3.67
1917 2221 1.045407 AAGAACCACGCACTGAGGTA 58.955 50.000 0.00 0.00 41.09 3.08
1927 2231 5.627780 GGTTTTTGCACTATTAAGAACCACG 59.372 40.000 0.00 0.00 39.52 4.94
1950 2261 2.288395 GCAGTGGTGGAATTCAAACTGG 60.288 50.000 20.92 5.75 40.19 4.00
1977 2288 1.975407 AGCTGCAAGGTCCATGTGC 60.975 57.895 1.02 5.49 44.61 4.57
2041 2430 6.313519 ACATTTTTAGTCATCCAGCCTAGA 57.686 37.500 0.00 0.00 0.00 2.43
2265 2812 8.412456 TCAAAATTGTGAATAAGAAAGCACAGA 58.588 29.630 0.00 0.00 41.63 3.41
2322 2869 6.914757 GCAAGTATTTTCATCACTAATGAGGC 59.085 38.462 0.00 0.00 45.05 4.70
2344 2891 4.576463 GCTTTAAGGCTCTAAGCATAGCAA 59.424 41.667 21.66 0.00 44.75 3.91
2368 2915 6.092807 GCTGTATTTAGCAAAGTGTAGCTCTT 59.907 38.462 0.00 0.00 43.17 2.85
2373 2920 6.727824 ACAGCTGTATTTAGCAAAGTGTAG 57.272 37.500 20.16 0.00 46.07 2.74
2458 3005 3.932710 GACGTGCTCATCAACCTTATTCA 59.067 43.478 0.00 0.00 0.00 2.57
2459 3006 3.932710 TGACGTGCTCATCAACCTTATTC 59.067 43.478 0.00 0.00 0.00 1.75
2460 3007 3.935203 CTGACGTGCTCATCAACCTTATT 59.065 43.478 0.00 0.00 0.00 1.40
2478 3025 6.578023 AGCTGTCAATTTATCTCTACCTGAC 58.422 40.000 0.00 0.00 33.85 3.51
2580 3127 9.726232 CCAATCATTTACTTGTTACATCAGATG 57.274 33.333 9.03 9.03 0.00 2.90
2583 3130 8.279970 TCCCAATCATTTACTTGTTACATCAG 57.720 34.615 0.00 0.00 0.00 2.90
2606 3153 4.507756 GCACAAGACAATTGAAAACCTTCC 59.492 41.667 13.59 0.00 0.00 3.46
2752 3299 6.074648 ACAGGAATGAGGTGTTTATTTTCCA 58.925 36.000 0.00 0.00 34.86 3.53
3177 3724 6.187727 TCTTGAGTAGGGAAAAACAGACAT 57.812 37.500 0.00 0.00 0.00 3.06
3222 3770 4.124851 ACAATGACTGACGAAGGGATAC 57.875 45.455 0.00 0.00 0.00 2.24
3314 3866 4.907269 TGAGGAAGTGCATATCCCTCATAA 59.093 41.667 19.46 4.71 45.87 1.90
3830 4382 0.324368 AGCCACCGATCCAGACACTA 60.324 55.000 0.00 0.00 0.00 2.74
3989 4542 6.079424 TGCTTTCTGGTTGGTTTATGTAAC 57.921 37.500 0.00 0.00 35.94 2.50
4048 4602 5.921962 ACTTTCTTCAAAAGCTGGAAACT 57.078 34.783 0.00 0.00 0.00 2.66
4072 4626 0.336392 AAAGGGAAAGGGATCAGGGC 59.664 55.000 0.00 0.00 0.00 5.19
4086 4667 3.571401 GGATATCCACATCTGCAAAAGGG 59.429 47.826 17.34 0.00 35.64 3.95
4179 4772 1.617322 AAGTGCAGAGACACGGAGTA 58.383 50.000 0.00 0.00 45.45 2.59
4180 4773 0.753262 AAAGTGCAGAGACACGGAGT 59.247 50.000 0.00 0.00 45.45 3.85
4181 4774 1.795286 GAAAAGTGCAGAGACACGGAG 59.205 52.381 0.00 0.00 45.45 4.63
4182 4775 1.540363 GGAAAAGTGCAGAGACACGGA 60.540 52.381 0.00 0.00 45.45 4.69
4183 4776 0.868406 GGAAAAGTGCAGAGACACGG 59.132 55.000 0.00 0.00 45.45 4.94
4184 4777 1.871080 AGGAAAAGTGCAGAGACACG 58.129 50.000 0.00 0.00 45.45 4.49
4185 4778 4.569943 TCATAGGAAAAGTGCAGAGACAC 58.430 43.478 0.00 0.00 41.02 3.67
4186 4779 4.890158 TCATAGGAAAAGTGCAGAGACA 57.110 40.909 0.00 0.00 0.00 3.41
4187 4780 5.877012 TCAATCATAGGAAAAGTGCAGAGAC 59.123 40.000 0.00 0.00 0.00 3.36
4188 4781 6.053632 TCAATCATAGGAAAAGTGCAGAGA 57.946 37.500 0.00 0.00 0.00 3.10
4315 4915 1.517276 CGGCGTCTTCTGTATTAAGCG 59.483 52.381 0.00 0.00 0.00 4.68
4316 4916 1.258197 GCGGCGTCTTCTGTATTAAGC 59.742 52.381 9.37 0.00 0.00 3.09
4317 4917 2.810650 AGCGGCGTCTTCTGTATTAAG 58.189 47.619 9.37 0.00 0.00 1.85
4318 4918 2.927477 CAAGCGGCGTCTTCTGTATTAA 59.073 45.455 9.37 0.00 0.00 1.40
4319 4919 2.094390 ACAAGCGGCGTCTTCTGTATTA 60.094 45.455 9.37 0.00 0.00 0.98
4320 4920 1.337823 ACAAGCGGCGTCTTCTGTATT 60.338 47.619 9.37 0.00 0.00 1.89
4331 4935 1.359848 ATCACTAAGAACAAGCGGCG 58.640 50.000 0.51 0.51 0.00 6.46
4417 5022 2.521708 ACAACAGCCCAAGCCCAC 60.522 61.111 0.00 0.00 41.25 4.61
4526 5138 1.069227 GCTGACCAAAGCAACTAACGG 60.069 52.381 0.00 0.00 43.01 4.44
4527 5139 2.316119 GCTGACCAAAGCAACTAACG 57.684 50.000 0.00 0.00 43.01 3.18
4609 5240 7.117956 GCACGAATACTTTCTAGGAAACTTTCT 59.882 37.037 1.57 0.00 43.67 2.52
4684 5331 1.451028 GGGCTCAGTGGCACAGATC 60.451 63.158 21.41 12.82 41.80 2.75
4722 5369 1.213678 TCAAAGCAGATGGATGGGGAG 59.786 52.381 0.00 0.00 0.00 4.30
4749 5401 0.874175 CGGCGACAAACACAGACTCA 60.874 55.000 0.00 0.00 0.00 3.41
4750 5402 1.853319 CGGCGACAAACACAGACTC 59.147 57.895 0.00 0.00 0.00 3.36
4751 5403 2.244651 GCGGCGACAAACACAGACT 61.245 57.895 12.98 0.00 0.00 3.24
4752 5404 2.248431 GCGGCGACAAACACAGAC 59.752 61.111 12.98 0.00 0.00 3.51
4753 5405 2.970324 GGCGGCGACAAACACAGA 60.970 61.111 12.98 0.00 0.00 3.41
4754 5406 2.128853 ATTGGCGGCGACAAACACAG 62.129 55.000 33.78 0.00 32.77 3.66
4758 5411 0.109319 AATCATTGGCGGCGACAAAC 60.109 50.000 33.78 1.83 32.77 2.93
4779 5432 2.206750 CCACGACGAGGTTCTTGAAAA 58.793 47.619 0.00 0.00 0.00 2.29
4783 5436 2.027625 GCCCACGACGAGGTTCTTG 61.028 63.158 10.51 0.00 0.00 3.02
4784 5437 2.342648 GCCCACGACGAGGTTCTT 59.657 61.111 10.51 0.00 0.00 2.52
4785 5438 2.915659 TGCCCACGACGAGGTTCT 60.916 61.111 10.51 0.00 0.00 3.01
4786 5439 2.432628 CTGCCCACGACGAGGTTC 60.433 66.667 10.51 2.64 0.00 3.62
4787 5440 4.003788 CCTGCCCACGACGAGGTT 62.004 66.667 10.51 0.00 0.00 3.50
4797 5450 4.284550 GTGAACTGCCCCTGCCCA 62.285 66.667 0.00 0.00 36.33 5.36
4799 5452 3.808218 TTGGTGAACTGCCCCTGCC 62.808 63.158 0.00 0.00 36.33 4.85
4801 5454 0.178992 TTCTTGGTGAACTGCCCCTG 60.179 55.000 0.00 0.00 0.00 4.45
4803 5456 0.110486 TCTTCTTGGTGAACTGCCCC 59.890 55.000 0.00 0.00 0.00 5.80
4804 5457 1.882623 CTTCTTCTTGGTGAACTGCCC 59.117 52.381 0.00 0.00 0.00 5.36
4807 5460 5.207110 TCTCTCTTCTTCTTGGTGAACTG 57.793 43.478 0.00 0.00 0.00 3.16
4808 5461 5.541868 TCATCTCTCTTCTTCTTGGTGAACT 59.458 40.000 0.00 0.00 0.00 3.01
4809 5462 5.788450 TCATCTCTCTTCTTCTTGGTGAAC 58.212 41.667 0.00 0.00 0.00 3.18
4810 5463 6.440010 AGATCATCTCTCTTCTTCTTGGTGAA 59.560 38.462 0.00 0.00 0.00 3.18
4811 5464 5.957168 AGATCATCTCTCTTCTTCTTGGTGA 59.043 40.000 0.00 0.00 0.00 4.02
4812 5465 6.224665 AGATCATCTCTCTTCTTCTTGGTG 57.775 41.667 0.00 0.00 0.00 4.17
4813 5466 7.125391 ACTAGATCATCTCTCTTCTTCTTGGT 58.875 38.462 0.00 0.00 35.28 3.67
4814 5467 7.587037 ACTAGATCATCTCTCTTCTTCTTGG 57.413 40.000 0.00 0.00 35.28 3.61
4847 5500 9.471084 CGTTGTTAGGATTTTAGGTTTGATTTT 57.529 29.630 0.00 0.00 0.00 1.82
4848 5501 7.597369 GCGTTGTTAGGATTTTAGGTTTGATTT 59.403 33.333 0.00 0.00 0.00 2.17
4849 5502 7.088272 GCGTTGTTAGGATTTTAGGTTTGATT 58.912 34.615 0.00 0.00 0.00 2.57
4850 5503 6.349860 GGCGTTGTTAGGATTTTAGGTTTGAT 60.350 38.462 0.00 0.00 0.00 2.57
4851 5504 5.048573 GGCGTTGTTAGGATTTTAGGTTTGA 60.049 40.000 0.00 0.00 0.00 2.69
4852 5505 5.158494 GGCGTTGTTAGGATTTTAGGTTTG 58.842 41.667 0.00 0.00 0.00 2.93
4853 5506 4.083164 CGGCGTTGTTAGGATTTTAGGTTT 60.083 41.667 0.00 0.00 0.00 3.27
4854 5507 3.437741 CGGCGTTGTTAGGATTTTAGGTT 59.562 43.478 0.00 0.00 0.00 3.50
4855 5508 3.004862 CGGCGTTGTTAGGATTTTAGGT 58.995 45.455 0.00 0.00 0.00 3.08
4856 5509 2.353579 CCGGCGTTGTTAGGATTTTAGG 59.646 50.000 6.01 0.00 0.00 2.69
4857 5510 3.004862 ACCGGCGTTGTTAGGATTTTAG 58.995 45.455 6.01 0.00 0.00 1.85
4858 5511 3.056588 ACCGGCGTTGTTAGGATTTTA 57.943 42.857 6.01 0.00 0.00 1.52
4859 5512 1.900245 ACCGGCGTTGTTAGGATTTT 58.100 45.000 6.01 0.00 0.00 1.82
4860 5513 1.900245 AACCGGCGTTGTTAGGATTT 58.100 45.000 6.01 0.00 0.00 2.17
4861 5514 1.900245 AAACCGGCGTTGTTAGGATT 58.100 45.000 6.01 0.00 30.72 3.01
4862 5515 2.766345 TAAACCGGCGTTGTTAGGAT 57.234 45.000 6.01 0.00 30.72 3.24
4863 5516 2.766345 ATAAACCGGCGTTGTTAGGA 57.234 45.000 6.01 0.00 30.72 2.94
4864 5517 3.835378 AAATAAACCGGCGTTGTTAGG 57.165 42.857 6.01 0.00 30.72 2.69
4865 5518 7.800015 AAATAAAATAAACCGGCGTTGTTAG 57.200 32.000 6.01 0.00 30.72 2.34
4866 5519 9.852091 ATAAAATAAAATAAACCGGCGTTGTTA 57.148 25.926 6.01 1.20 30.72 2.41
4867 5520 8.760103 ATAAAATAAAATAAACCGGCGTTGTT 57.240 26.923 6.01 0.06 30.72 2.83
4868 5521 8.760103 AATAAAATAAAATAAACCGGCGTTGT 57.240 26.923 6.01 0.00 30.72 3.32
4883 5536 9.457436 AGAGCTCCTCGGTTAAAATAAAATAAA 57.543 29.630 10.93 0.00 35.36 1.40
4884 5537 9.457436 AAGAGCTCCTCGGTTAAAATAAAATAA 57.543 29.630 10.93 0.00 35.36 1.40
4885 5538 9.457436 AAAGAGCTCCTCGGTTAAAATAAAATA 57.543 29.630 10.93 0.00 35.36 1.40
4886 5539 7.939784 AAGAGCTCCTCGGTTAAAATAAAAT 57.060 32.000 10.93 0.00 35.36 1.82
4887 5540 7.754851 AAAGAGCTCCTCGGTTAAAATAAAA 57.245 32.000 10.93 0.00 35.36 1.52
4888 5541 7.754851 AAAAGAGCTCCTCGGTTAAAATAAA 57.245 32.000 10.93 0.00 35.36 1.40
4889 5542 7.664318 AGAAAAAGAGCTCCTCGGTTAAAATAA 59.336 33.333 10.93 0.00 35.36 1.40
4890 5543 7.166167 AGAAAAAGAGCTCCTCGGTTAAAATA 58.834 34.615 10.93 0.00 35.36 1.40
4891 5544 6.004574 AGAAAAAGAGCTCCTCGGTTAAAAT 58.995 36.000 10.93 0.00 35.36 1.82
4892 5545 5.374071 AGAAAAAGAGCTCCTCGGTTAAAA 58.626 37.500 10.93 0.00 35.36 1.52
4893 5546 4.969484 AGAAAAAGAGCTCCTCGGTTAAA 58.031 39.130 10.93 0.00 35.36 1.52
4894 5547 4.618920 AGAAAAAGAGCTCCTCGGTTAA 57.381 40.909 10.93 0.00 35.36 2.01
4895 5548 5.934402 ATAGAAAAAGAGCTCCTCGGTTA 57.066 39.130 10.93 0.00 35.36 2.85
4896 5549 4.828072 ATAGAAAAAGAGCTCCTCGGTT 57.172 40.909 10.93 0.00 35.36 4.44
4897 5550 4.828072 AATAGAAAAAGAGCTCCTCGGT 57.172 40.909 10.93 0.00 35.36 4.69
4898 5551 4.747605 GCTAATAGAAAAAGAGCTCCTCGG 59.252 45.833 10.93 0.00 35.36 4.63
4899 5552 4.747605 GGCTAATAGAAAAAGAGCTCCTCG 59.252 45.833 10.93 0.00 35.36 4.63
4900 5553 5.924356 AGGCTAATAGAAAAAGAGCTCCTC 58.076 41.667 10.93 2.30 33.57 3.71
4901 5554 5.966853 AGGCTAATAGAAAAAGAGCTCCT 57.033 39.130 10.93 2.07 33.57 3.69
4902 5555 8.684386 ATTAAGGCTAATAGAAAAAGAGCTCC 57.316 34.615 10.93 0.00 33.57 4.70
4907 5560 9.847224 CCCACTATTAAGGCTAATAGAAAAAGA 57.153 33.333 20.69 0.00 45.40 2.52
4908 5561 9.628500 ACCCACTATTAAGGCTAATAGAAAAAG 57.372 33.333 20.69 11.88 45.40 2.27
4909 5562 9.984590 AACCCACTATTAAGGCTAATAGAAAAA 57.015 29.630 20.69 0.00 45.40 1.94
4912 5565 9.443365 ACTAACCCACTATTAAGGCTAATAGAA 57.557 33.333 20.69 1.23 45.40 2.10
4913 5566 9.443365 AACTAACCCACTATTAAGGCTAATAGA 57.557 33.333 20.69 5.98 45.40 1.98
4916 5569 8.995577 TGTAACTAACCCACTATTAAGGCTAAT 58.004 33.333 0.00 0.00 0.00 1.73
4917 5570 8.378115 TGTAACTAACCCACTATTAAGGCTAA 57.622 34.615 0.00 0.00 0.00 3.09
4918 5571 7.976414 TGTAACTAACCCACTATTAAGGCTA 57.024 36.000 0.00 0.00 0.00 3.93
4919 5572 6.879367 TGTAACTAACCCACTATTAAGGCT 57.121 37.500 0.00 0.00 0.00 4.58
4920 5573 7.506971 AGATGTAACTAACCCACTATTAAGGC 58.493 38.462 0.00 0.00 0.00 4.35
4930 5583 4.845225 TGGGTTGTAGATGTAACTAACCCA 59.155 41.667 20.69 20.69 44.44 4.51
4936 5589 8.357402 GTTTTCATTTGGGTTGTAGATGTAACT 58.643 33.333 0.00 0.00 0.00 2.24
4966 5619 2.488937 ACGTTTTTGAACCACGAAAGGT 59.511 40.909 2.65 0.00 45.91 3.50
4989 5642 5.707298 ACAAATGATGATTGAGACGAGGTTT 59.293 36.000 0.00 0.00 0.00 3.27
4992 5645 4.872124 TGACAAATGATGATTGAGACGAGG 59.128 41.667 0.00 0.00 0.00 4.63
5025 5678 3.813724 GTCGAAGCCAAAGAACTTACCTT 59.186 43.478 0.00 0.00 0.00 3.50
5026 5679 3.071167 AGTCGAAGCCAAAGAACTTACCT 59.929 43.478 0.00 0.00 0.00 3.08
5044 5697 5.503031 GCAACATGATCTAAATGTCCAGTCG 60.503 44.000 0.00 0.00 37.27 4.18
5048 5701 7.229306 GGAATAGCAACATGATCTAAATGTCCA 59.771 37.037 0.00 0.00 37.27 4.02
5059 5712 2.346766 TGCGGGAATAGCAACATGAT 57.653 45.000 0.00 0.00 42.18 2.45
5085 5739 8.937634 AAATTATTTCATCGAACGTACTACCT 57.062 30.769 0.00 0.00 0.00 3.08
5156 5817 6.538381 CAGGGTTTTGGGCATAAATATTTCAC 59.462 38.462 3.39 0.00 0.00 3.18
5159 5820 6.882768 TCAGGGTTTTGGGCATAAATATTT 57.117 33.333 5.89 5.89 0.00 1.40
5163 5824 4.782156 TGAATCAGGGTTTTGGGCATAAAT 59.218 37.500 0.00 0.00 0.00 1.40
5196 5857 6.109359 GCTCCTTGAGCGGTATCAAATATAT 58.891 40.000 0.00 0.00 45.85 0.86
5200 5861 2.565841 GCTCCTTGAGCGGTATCAAAT 58.434 47.619 0.00 0.00 45.85 2.32
5201 5862 2.024176 GCTCCTTGAGCGGTATCAAA 57.976 50.000 0.00 0.00 45.85 2.69
5278 5956 6.453092 AGAAATGCAATAGCTAAATGATGGC 58.547 36.000 12.65 0.43 42.74 4.40
5323 6118 4.500716 CGTGCCCAATTCCAAAGTTAGTTT 60.501 41.667 0.00 0.00 0.00 2.66
5346 6141 5.865013 GCGCTTCTAAAGGATCTCTAATACC 59.135 44.000 0.00 0.00 0.00 2.73
5353 6429 4.877282 AGTATGCGCTTCTAAAGGATCTC 58.123 43.478 9.73 0.00 0.00 2.75
5435 6759 2.345641 CGTGAGCGACTTCGAATGAATT 59.654 45.455 2.02 0.00 43.02 2.17
5444 6768 2.530700 GCTTATGTACGTGAGCGACTTC 59.469 50.000 15.22 0.00 42.00 3.01
5446 6770 1.471287 TGCTTATGTACGTGAGCGACT 59.529 47.619 22.49 0.00 42.00 4.18
5447 6771 1.904144 TGCTTATGTACGTGAGCGAC 58.096 50.000 22.49 2.52 42.00 5.19
5448 6772 2.863401 ATGCTTATGTACGTGAGCGA 57.137 45.000 22.49 14.17 42.00 4.93
5449 6773 3.179795 GTGTATGCTTATGTACGTGAGCG 59.820 47.826 22.49 0.00 44.93 5.03
5451 6775 5.455849 GTGAGTGTATGCTTATGTACGTGAG 59.544 44.000 0.00 2.53 0.00 3.51
5456 6780 5.277857 AGGGTGAGTGTATGCTTATGTAC 57.722 43.478 0.00 0.00 0.00 2.90
5457 6781 5.950544 AAGGGTGAGTGTATGCTTATGTA 57.049 39.130 0.00 0.00 0.00 2.29
5458 6782 4.844349 AAGGGTGAGTGTATGCTTATGT 57.156 40.909 0.00 0.00 0.00 2.29
5462 6786 4.684485 GCTCATAAGGGTGAGTGTATGCTT 60.684 45.833 5.87 0.00 45.80 3.91
5463 6787 3.181461 GCTCATAAGGGTGAGTGTATGCT 60.181 47.826 5.87 0.00 45.80 3.79
5464 6788 3.134458 GCTCATAAGGGTGAGTGTATGC 58.866 50.000 5.87 0.00 45.80 3.14
5466 6790 3.134804 GGTGCTCATAAGGGTGAGTGTAT 59.865 47.826 5.87 0.00 45.80 2.29
5467 6791 2.500098 GGTGCTCATAAGGGTGAGTGTA 59.500 50.000 5.87 0.00 45.80 2.90
5468 6792 1.279271 GGTGCTCATAAGGGTGAGTGT 59.721 52.381 5.87 0.00 45.80 3.55
5469 6793 1.556911 AGGTGCTCATAAGGGTGAGTG 59.443 52.381 5.87 0.00 45.80 3.51
5470 6794 1.958288 AGGTGCTCATAAGGGTGAGT 58.042 50.000 5.87 0.00 45.80 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.